Overview

ID MAG00940
Name DYD2_bin.7
Sample SMP0026
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Alphaproteobacteria
Order Sphingomonadales
Family Sphingomonadaceae
Genus Sphingomicrobium
Species
Assembly information
Completeness (%) 99.82
Contamination (%) 4.15
GC content (%) 62.0
N50 (bp) 26,084
Genome size (bp) 2,539,146

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2519

Gene name Description KEGG GOs EC E-value Score Sequence
DYD2_k127_1007389_0 DNA invertase Pin - - - 4.708e-248 785.0
DYD2_k127_1007389_1 PFAM Integrase catalytic region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004463 372.0
DYD2_k127_1007389_2 transposase activity K07483 - - 0.0000000000000000000000000000061 121.0
DYD2_k127_1007389_4 - - - - 0.0000007917 52.0
DYD2_k127_1007389_5 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.0002482 51.0
DYD2_k127_1007389_6 - - - - 0.0004793 45.0
DYD2_k127_105189_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 2493.0
DYD2_k127_105189_1 ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component K02004 - - 8.954e-307 961.0
DYD2_k127_105189_10 transcriptional regulator - - - 0.000000000000000000000000000000000000000000005176 173.0
DYD2_k127_105189_11 YHS domain - - - 0.0000000000000000000000000000000000000005205 155.0
DYD2_k127_105189_12 DoxX K15977 - - 0.000000000000000002269 84.0
DYD2_k127_105189_2 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 1.131e-247 766.0
DYD2_k127_105189_3 DNA-binding protein with the helix-hairpin-helix motif - - - 1.901e-220 689.0
DYD2_k127_105189_4 Major facilitator superfamily K03446 - - 3.172e-216 686.0
DYD2_k127_105189_5 RND efflux system, outer membrane lipoprotein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001457 605.0
DYD2_k127_105189_6 Uracil-DNA glycosylase K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 595.0
DYD2_k127_105189_7 PFAM secretion protein HlyD family protein K03543 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005361 440.0
DYD2_k127_105189_8 ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 335.0
DYD2_k127_105189_9 COG2755 Lysophospholipase L1 and related esterases K10804 - 3.1.1.5 0.000000000000000000000000000000000000000000000000000000000000000000006242 248.0
DYD2_k127_1093763_0 Oxidoreductase - - - 2.198e-273 847.0
DYD2_k127_1093763_1 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00383 - 1.8.1.7 1.255e-219 688.0
DYD2_k127_1093763_10 Histidine kinase - - - 0.0000000000000000000000000000000000000005895 162.0
DYD2_k127_1093763_11 - - - - 0.000000000000000000000000000000000004179 143.0
DYD2_k127_1093763_12 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.00000000000000000000000003248 109.0
DYD2_k127_1093763_2 Belongs to the GPI family K01810 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 5.3.1.9 6.588e-203 644.0
DYD2_k127_1093763_3 dehydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007058 533.0
DYD2_k127_1093763_4 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002897 411.0
DYD2_k127_1093763_5 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003516 351.0
DYD2_k127_1093763_6 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007008 308.0
DYD2_k127_1093763_7 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001803 306.0
DYD2_k127_1093763_8 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.0000000000000000000000000000000000000000000000000000000000000000000000007891 254.0
DYD2_k127_1093763_9 tail specific protease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000008545 259.0
DYD2_k127_1114756_0 Amidohydrolase family K06015 - 3.5.1.81 2.593e-234 740.0
DYD2_k127_1114756_1 UDP-N-acetylmuramate-alanine ligase K01924 - 6.3.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002649 351.0
DYD2_k127_1114756_2 LD-carboxypeptidase K01297 - 3.4.17.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004871 315.0
DYD2_k127_1114756_3 Extensin-like protein C-terminus - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003417 281.0
DYD2_k127_1114756_4 SWI complex, BAF60b domains - - - 0.0000000000000000000000000000001372 126.0
DYD2_k127_1116285_0 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003337 403.0
DYD2_k127_1116285_1 COG0639 Diadenosine tetraphosphatase and related serine threonine protein phosphatases K07313 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000006849 241.0
DYD2_k127_1116285_2 Chaperone - - - 0.0000000000000000000000000000000000000000000000000000000000001948 220.0
DYD2_k127_1116285_3 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.000000000000000000000000000000000000000000000000000000008957 207.0
DYD2_k127_1116285_4 Protein of unknown function (DUF1465) K13592 - - 0.0000000000000000000000000000000000000000000000001413 180.0
DYD2_k127_1116285_5 Protein of unknown function (DUF465) - - - 0.000000000002197 68.0
DYD2_k127_1116285_6 Small protein - - - 0.000000000009172 66.0
DYD2_k127_1123626_0 acyl-CoA dehydrogenase K20035 - - 9.208e-246 770.0
DYD2_k127_1123626_1 Male sterility protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003434 477.0
DYD2_k127_1123626_10 CHASE2 - - - 0.000000000001521 71.0
DYD2_k127_1123626_2 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02474,K13015 - 1.1.1.136 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007408 475.0
DYD2_k127_1123626_3 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 - 2.7.7.87 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004602 396.0
DYD2_k127_1123626_5 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001946 286.0
DYD2_k127_1123626_6 nitroreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003877 274.0
DYD2_k127_1123626_7 Transcriptional regulator K07979 - - 0.0000000000000000000000000000000000000000000002957 169.0
DYD2_k127_1123626_8 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000000000001001 164.0
DYD2_k127_1123626_9 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02474,K13015 - 1.1.1.136 0.0000000000000000001319 95.0
DYD2_k127_1135525_0 COG0626 Cystathionine beta-lyases cystathionine gamma-synthases K01760 - 4.4.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004843 419.0
DYD2_k127_1135525_1 COG0834 ABC-type amino acid transport signal transduction systems periplasmic component domain K09969 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.0000000000000000000001394 100.0
DYD2_k127_1193224_0 phosphoprotein phosphatase activity K14680 - 6.5.1.3 0.000000000000000000000000000000000000000000000000000001426 201.0
DYD2_k127_1193224_1 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000505 112.0
DYD2_k127_1193224_2 Tetratricopeptide repeats K12132 - 2.7.11.1 0.000000000000000001188 88.0
DYD2_k127_1245488_0 protein conserved in bacteria K09800 - - 0.0 1429.0
DYD2_k127_1245488_1 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 - - 0.0 1114.0
DYD2_k127_1245488_10 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004225 423.0
DYD2_k127_1245488_11 mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002701 410.0
DYD2_k127_1245488_12 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002023 336.0
DYD2_k127_1245488_13 Domain of unknown function (DUF4126) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002624 273.0
DYD2_k127_1245488_14 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003369 282.0
DYD2_k127_1245488_15 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002009 253.0
DYD2_k127_1245488_16 PilZ domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001945 246.0
DYD2_k127_1245488_17 DJ-1/PfpI family K05520 - 3.5.1.124 0.00000000000000000000000000000000000000000000000000000000000000000002289 237.0
DYD2_k127_1245488_18 MaoC like domain - - - 0.000000000000000000000000000000000000000000000000000000000003029 211.0
DYD2_k127_1245488_19 thioesterase K07107 - - 0.000000000000000000000000000000000000000000000000000000000003257 210.0
DYD2_k127_1245488_2 highly regulated protein controlled by the addition removal of adenylyl groups by adenylyltransferase from specific tyrosine residues K01915 - 6.3.1.2 8.169e-277 854.0
DYD2_k127_1245488_20 Belongs to the small heat shock protein (HSP20) family K04080 - - 0.00000000000000000000000000000000000000000000000000000000005489 214.0
DYD2_k127_1245488_21 PFAM Acetyltransferase (GNAT) family K03395 - 2.3.1.60 0.0000000000000000000008082 98.0
DYD2_k127_1245488_22 - - - - 0.00000000000000000008732 93.0
DYD2_k127_1245488_24 - - - - 0.00000000000000001564 84.0
DYD2_k127_1245488_25 - - - - 0.00000000000001134 74.0
DYD2_k127_1245488_26 Acetyltransferase (GNAT) domain K03395 - 2.3.1.60 0.0000000000003683 70.0
DYD2_k127_1245488_27 Mycolic acid cyclopropane synthetase - - - 0.000001232 50.0
DYD2_k127_1245488_3 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307,K11928,K14392 - - 7.069e-214 675.0
DYD2_k127_1245488_4 Belongs to the thiolase family K00626,K00632 - 2.3.1.16,2.3.1.9 1.344e-212 665.0
DYD2_k127_1245488_5 COG0729 Outer membrane protein K07278 - - 3.019e-201 646.0
DYD2_k127_1245488_6 de-polymerase K05973 - 3.1.1.75 2.682e-194 612.0
DYD2_k127_1245488_7 Permeases of the major facilitator superfamily K03761 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 559.0
DYD2_k127_1245488_8 Methionine aminopeptidase K01265 - 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004041 497.0
DYD2_k127_1245488_9 DNA topoisomerase K03168 - 5.99.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002007 462.0
DYD2_k127_1288453_0 Pyridine nucleotide-disulphide oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 372.0
DYD2_k127_1288453_1 Enoyl-(Acyl carrier protein) reductase K00019 - 1.1.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001849 371.0
DYD2_k127_1288453_2 Belongs to the UPF0276 family K09930 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002679 345.0
DYD2_k127_1288453_3 Major Facilitator Superfamily K08224 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002115 347.0
DYD2_k127_1288453_4 PFAM Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003135 276.0
DYD2_k127_1288453_5 Cupin - - - 0.000000000000000000000000000000000000001626 152.0
DYD2_k127_1288453_6 Putative DNA-binding domain - - - 0.000000000000000000000000000000000008151 145.0
DYD2_k127_1288453_7 Predicted integral membrane protein (DUF2282) - - - 0.0000000000000000000000000000533 119.0
DYD2_k127_1288453_8 PFAM DoxX family protein K15977 - - 0.0000000000000000000000000005549 115.0
DYD2_k127_1288453_9 carboxymuconolactone decarboxylase K01607 - 4.1.1.44 0.00000000000000000000000001989 117.0
DYD2_k127_1299882_0 Transposase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003888 498.0
DYD2_k127_1299882_1 Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b) K07337 - - 0.00000002536 60.0
DYD2_k127_1317898_0 Dienelactone hydrolase family - - - 1.856e-303 945.0
DYD2_k127_1317898_1 Histidine kinase - - - 5.779e-200 641.0
DYD2_k127_1317898_10 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000008605 241.0
DYD2_k127_1317898_11 of ABC transporters with duplicated ATPase K15738 - - 0.000000000000000000000000000000000000000000000000000000000000006918 217.0
DYD2_k127_1317898_12 COG0346 Lactoylglutathione lyase and related lyases - - - 0.00000000000000000000000000000000000000000008109 170.0
DYD2_k127_1317898_13 WD40-like Beta Propeller Repeat - - - 0.000000000000000000000000000000000000000009263 166.0
DYD2_k127_1317898_14 - - - - 0.0000000000000000000000000000002703 125.0
DYD2_k127_1317898_15 ETC complex I subunit - - - 0.0000000000000000000000000000004779 124.0
DYD2_k127_1317898_16 component I K01665,K03342 - 2.6.1.85,4.1.3.38 0.0000000000000000000006325 100.0
DYD2_k127_1317898_18 - - - - 0.00000002306 66.0
DYD2_k127_1317898_2 Zn-dependent dipeptidase, microsomal dipeptidase K01273 - 3.4.13.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000344 574.0
DYD2_k127_1317898_3 Domain of unknown function (DUF4976) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003673 546.0
DYD2_k127_1317898_4 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002349 490.0
DYD2_k127_1317898_5 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 428.0
DYD2_k127_1317898_6 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009167 374.0
DYD2_k127_1317898_7 TonB-dependent Receptor Plug Domain K02014,K15721 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007146 386.0
DYD2_k127_1317898_8 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791 - 5.1.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 343.0
DYD2_k127_1317898_9 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005048 287.0
DYD2_k127_136929_0 Adenylate cyclase, family 3 (some proteins contain HAMP domain) K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 331.0
DYD2_k127_136929_1 Protein of unknown function (DUF1326) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 284.0
DYD2_k127_136929_2 Protein of unknown function (DUF4242) - - - 0.00000000000000000000000000000000000002681 144.0
DYD2_k127_136929_3 Adenylate and Guanylate cyclase catalytic domain - - - 0.0000005545 54.0
DYD2_k127_1377305_0 belongs to the aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 5.248e-223 698.0
DYD2_k127_1377305_1 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 1.166e-217 696.0
DYD2_k127_1377305_2 PAS domain - - - 0.000000000000000000000000000003572 136.0
DYD2_k127_1377305_3 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.000000000000000000000000054 108.0
DYD2_k127_1377305_4 PilZ domain - - - 0.00002778 55.0
DYD2_k127_1441836_0 cheY-homologous receiver domain - - - 1.101e-241 762.0
DYD2_k127_1441836_1 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002397 344.0
DYD2_k127_1441836_2 Ribosomal protein L17 K02879 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001242 245.0
DYD2_k127_1441836_3 COG2931, RTX toxins and related Ca2 -binding proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004085 269.0
DYD2_k127_1441836_4 MgtC family K07507 - - 0.0000000000000000000000000000000000000000000000000000006423 199.0
DYD2_k127_1441836_5 CrcB-like protein, Camphor Resistance (CrcB) K06199 - - 0.0000000000000000000000000000000000003775 151.0
DYD2_k127_1441836_6 Putative inner membrane exporter, YdcZ K09936 - - 0.000000000000000000000000000000000007069 141.0
DYD2_k127_1484530_0 COG1629 Outer membrane receptor proteins, mostly Fe transport K02014 - - 0.0 1305.0
DYD2_k127_1484530_1 Glycosyl-hydrolase 97 C-terminal, oligomerisation K01187 - 3.2.1.20 9.222e-295 923.0
DYD2_k127_1484530_10 PEP-CTERM motif - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009168 265.0
DYD2_k127_1484530_11 receptor K02014 - - 0.000000000000000006223 89.0
DYD2_k127_1484530_12 Beta/Gamma crystallin - - - 0.000000000000000007596 94.0
DYD2_k127_1484530_2 Alpha-amylase domain - - - 2.363e-258 810.0
DYD2_k127_1484530_3 Alpha-amylase domain K01187 - 3.2.1.20 1.354e-242 760.0
DYD2_k127_1484530_4 acyl-CoA dehydrogenase K00249 - 1.3.8.7 2.171e-215 674.0
DYD2_k127_1484530_5 Tryptophan halogenase K14266 - 1.14.19.9 5.748e-205 649.0
DYD2_k127_1484530_6 enoyl-CoA hydratase K01692 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002037 520.0
DYD2_k127_1484530_7 Belongs to the enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001851 435.0
DYD2_k127_1484530_8 COG1609 Transcriptional regulators - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001883 392.0
DYD2_k127_1484530_9 Putative esterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002665 286.0
DYD2_k127_1497603_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1472.0
DYD2_k127_1497603_1 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 0.0 1191.0
DYD2_k127_1497603_10 Aminomethyltransferase K06980 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008814 379.0
DYD2_k127_1497603_11 ABC-type Na efflux pump, permease component K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001847 314.0
DYD2_k127_1497603_12 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003539 295.0
DYD2_k127_1497603_13 COG2513 PEP phosphonomutase and related enzymes - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006355 274.0
DYD2_k127_1497603_14 Protein of unknown function (DUF2585) - - - 0.000000000000000000000000000000000000000000000000000000000002406 217.0
DYD2_k127_1497603_15 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases - - - 0.00000000000000000000000000000000000000000000000000000000001636 208.0
DYD2_k127_1497603_16 Lipid A 3-O-deacylase (PagL) - - - 0.000000000000000000000000000000000000000000000000000008253 194.0
DYD2_k127_1497603_17 GMC oxidoreductase - - - 0.0000000000000000000000000000000000000000000000003256 177.0
DYD2_k127_1497603_18 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 0.000000000000000000000000000000000005545 138.0
DYD2_k127_1497603_2 C-terminus of AA_permease K03294 - - 5.683e-261 815.0
DYD2_k127_1497603_20 - - - - 0.000000000000000000002883 95.0
DYD2_k127_1497603_21 - - - - 0.000000000000000002314 90.0
DYD2_k127_1497603_3 Leukotriene A4 hydrolase, C-terminal - - - 6.632e-227 719.0
DYD2_k127_1497603_4 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 9.762e-199 646.0
DYD2_k127_1497603_5 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003673 550.0
DYD2_k127_1497603_6 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002351 491.0
DYD2_k127_1497603_7 Response regulator of the LytR AlgR family K02477 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008436 470.0
DYD2_k127_1497603_8 ABC transporter, ATP-binding protein K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001725 446.0
DYD2_k127_1497603_9 Carbohydrate kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006329 406.0
DYD2_k127_1526162_0 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000009917 141.0
DYD2_k127_1526162_1 Serine threonine protein kinase K08282,K12132 - 2.7.11.1 0.00000000000000000000000000000000003879 137.0
DYD2_k127_1532093_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 0.0 1233.0
DYD2_k127_1532093_1 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951,K01139 - 2.7.6.5,3.1.7.2 0.0 1202.0
DYD2_k127_1532093_10 aldo keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000372 463.0
DYD2_k127_1532093_11 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004786 452.0
DYD2_k127_1532093_12 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002462 437.0
DYD2_k127_1532093_13 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003903 437.0
DYD2_k127_1532093_14 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000284 426.0
DYD2_k127_1532093_15 COG1502 Phosphatidylserine phosphatidylglycerophosphate cardiolipi n synthases and related enzymes K06131 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004677 434.0
DYD2_k127_1532093_16 Histidine-specific methyltransferase, SAM-dependent - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009923 417.0
DYD2_k127_1532093_17 ABC-type transport system involved in Fe-S cluster assembly, ATPase component K09013 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004347 401.0
DYD2_k127_1532093_18 Belongs to the class-I aminoacyl-tRNA synthetase family K01894 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005928 389.0
DYD2_k127_1532093_19 HNH endonuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001768 374.0
DYD2_k127_1532093_2 Malic enzyme K00029 - 1.1.1.40 0.0 1185.0
DYD2_k127_1532093_20 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007372 374.0
DYD2_k127_1532093_21 Hydrolase K07025 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003711 336.0
DYD2_k127_1532093_22 gag-polyprotein putative aspartyl protease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009407 344.0
DYD2_k127_1532093_23 Methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007026 311.0
DYD2_k127_1532093_24 methyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002126 310.0
DYD2_k127_1532093_25 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001861 304.0
DYD2_k127_1532093_26 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 305.0
DYD2_k127_1532093_27 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002606 304.0
DYD2_k127_1532093_28 UPF0056 membrane protein K05595 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004022 296.0
DYD2_k127_1532093_29 NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002237 296.0
DYD2_k127_1532093_3 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 0.0 1111.0
DYD2_k127_1532093_30 ABC-type transport system involved in Fe-S cluster assembly, permease component K09015 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002162 285.0
DYD2_k127_1532093_31 RES - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002375 276.0
DYD2_k127_1532093_32 adenosyltransferase K00798 - 2.5.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000001915 260.0
DYD2_k127_1532093_33 COG0346 Lactoylglutathione lyase and related lyases K01759 - 4.4.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000052 235.0
DYD2_k127_1532093_34 - - - - 0.000000000000000000000000000000000000000000000000000000000000000005437 231.0
DYD2_k127_1532093_35 FeS assembly SUF system protein - - - 0.000000000000000000000000000000000000000000000000000000000000000007236 227.0
DYD2_k127_1532093_36 Belongs to the HesB IscA family K13628 - - 0.00000000000000000000000000000000000000000000000000000000007467 205.0
DYD2_k127_1532093_37 Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ K06137 GO:0005575,GO:0005576 1.3.3.11 0.000000000000000000000000000000000000000000000000000000001376 209.0
DYD2_k127_1532093_39 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000577 200.0
DYD2_k127_1532093_4 ABC-type transport system involved in Fe-S cluster assembly, permease component K09014 - - 7.105e-297 916.0
DYD2_k127_1532093_40 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.00000000000000000000000000000000000000000000000000004319 189.0
DYD2_k127_1532093_41 Redoxin - - - 0.0000000000000000000000000000000000000000000008678 172.0
DYD2_k127_1532093_42 transcriptional - - - 0.00000000000000000000000000000000000000000000133 171.0
DYD2_k127_1532093_43 Protein of unknown function (DUF1489) - - - 0.000000000000000000000000000000000000000000001458 168.0
DYD2_k127_1532093_44 metal-binding protein - - - 0.00000000000000000000000000000000000000000004913 164.0
DYD2_k127_1532093_45 Transcriptional regulator - - - 0.00000000000000000000000000000000000000001004 157.0
DYD2_k127_1532093_46 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000007143 146.0
DYD2_k127_1532093_47 Cytochrome c - - - 0.000000000000000000000000000038 122.0
DYD2_k127_1532093_48 PRC-barrel domain - - - 0.0000000000000000000000000004331 119.0
DYD2_k127_1532093_49 - - - - 0.0000000000000000000000000004383 117.0
DYD2_k127_1532093_5 synthetase K01897 - 6.2.1.3 4.382e-282 877.0
DYD2_k127_1532093_50 integral membrane protein K02221 - - 0.000000000000000000000000004258 113.0
DYD2_k127_1532093_51 - - - - 0.0000000000000000000000001508 111.0
DYD2_k127_1532093_52 Type IV pilus biogenesis stability protein PilW - - - 0.000000000000000000001499 106.0
DYD2_k127_1532093_53 - - - - 0.0000000000000000006405 91.0
DYD2_k127_1532093_57 - - - - 0.00000000002011 68.0
DYD2_k127_1532093_6 gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 1.251e-248 780.0
DYD2_k127_1532093_7 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 2.855e-228 709.0
DYD2_k127_1532093_8 DinB superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141 600.0
DYD2_k127_1532093_9 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002208 595.0
DYD2_k127_1534166_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1334.0
DYD2_k127_1534166_1 TonB dependent receptor - - - 0.0 1304.0
DYD2_k127_1534166_10 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009263 367.0
DYD2_k127_1534166_11 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 352.0
DYD2_k127_1534166_12 Phosphate transport regulator K07220 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003324 273.0
DYD2_k127_1534166_13 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008763 247.0
DYD2_k127_1534166_14 cyclic nucleotide binding - - - 0.0000000000000000000000000000000000000000000000000000000000371 207.0
DYD2_k127_1534166_15 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.000000000000000000000000000000000002438 139.0
DYD2_k127_1534166_16 - - - - 0.000000000000000000000000000001511 127.0
DYD2_k127_1534166_18 - - - - 0.0000283 51.0
DYD2_k127_1534166_2 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 5.245e-270 837.0
DYD2_k127_1534166_3 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 3.427e-254 786.0
DYD2_k127_1534166_4 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 1.272e-208 661.0
DYD2_k127_1534166_5 Alkaline phosphatase with broad substrate specificity K01077 - 3.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002199 612.0
DYD2_k127_1534166_6 phosphate transporter K03306 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006615 565.0
DYD2_k127_1534166_7 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002711 554.0
DYD2_k127_1534166_8 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002047 519.0
DYD2_k127_1534166_9 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005128 481.0
DYD2_k127_1563375_0 Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007428 407.0
DYD2_k127_1563375_1 Chaperone SurA K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000001069 229.0
DYD2_k127_1619534_0 protein conserved in bacteria - - - 1.208e-294 915.0
DYD2_k127_1619534_1 Belongs to the class-I aminoacyl-tRNA synthetase family K04566 - 6.1.1.6 2.334e-270 839.0
DYD2_k127_1619534_10 Domain of unknown function (DUF4893) - - - 0.0000000000000000000000000000000000000000000000000000000000000000002666 237.0
DYD2_k127_1619534_11 AsnC-type helix-turn-helix domain - - - 0.000000000000000000000000000000000000000000000000004459 186.0
DYD2_k127_1619534_12 Uncharacterized protein conserved in bacteria (DUF2171) - - - 0.0000000000000000000000000000000000000000000003979 179.0
DYD2_k127_1619534_13 Nickel/cobalt transporter regulator - - - 0.00000000000000000000000000000002413 138.0
DYD2_k127_1619534_14 ferredoxin K04755 - - 0.000000000000000000000000000001294 124.0
DYD2_k127_1619534_2 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00626 - 2.3.1.9 2.393e-196 617.0
DYD2_k127_1619534_3 Helicase K03722 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004049 593.0
DYD2_k127_1619534_4 ABC transporter transmembrane region K06148 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001984 497.0
DYD2_k127_1619534_5 alcohol dehydrogenase K07119 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006221 464.0
DYD2_k127_1619534_6 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00019 - 1.1.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003547 394.0
DYD2_k127_1619534_7 metalloprotease K07054 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002772 352.0
DYD2_k127_1619534_8 Serine aminopeptidase, S33 K01055 - 3.1.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005398 271.0
DYD2_k127_1619534_9 Peptidase family S41 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001498 275.0
DYD2_k127_1637178_0 Peptidase family M48 - - - 0.000000000000000000000000002404 124.0
DYD2_k127_1637178_1 Transmembrane sensor domain - - - 0.00000000000000000000000492 117.0
DYD2_k127_1669245_0 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000566 389.0
DYD2_k127_1669245_1 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.00000000000000000000000000000000000000000000000000000000000000000000001698 248.0
DYD2_k127_1669245_2 D-isomer specific 2-hydroxyacid dehydrogenase K03778 - 1.1.1.28 0.00000000000000000000000000000000000000000000000000000000000000000002257 237.0
DYD2_k127_1669245_3 Protein of unknown function (FYDLN_acid) - - - 0.0000000000000000000000000000000000001032 143.0
DYD2_k127_1669245_4 - - - - 0.000000000000000001353 97.0
DYD2_k127_1669245_5 heat shock protein binding - - - 0.00000000000004755 80.0
DYD2_k127_169080_0 Helicase K03722 - 3.6.4.12 1.732e-227 713.0
DYD2_k127_169080_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003111 524.0
DYD2_k127_169080_2 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000001172 211.0
DYD2_k127_169080_3 phosphohistidine phosphatase K08296 - - 0.0000000000000000000000000000000000000000000000003268 180.0
DYD2_k127_169080_4 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.0000000000000000000000000000000000000000000122 167.0
DYD2_k127_169080_5 transcriptional - - - 0.0000000000000000000000000000000000003679 144.0
DYD2_k127_1712894_0 Homeodomain-like domain K07497 - - 2.048e-214 670.0
DYD2_k127_1712894_1 Protein of unknown function (DUF2442) - - - 0.0000000000000000000000000000001525 128.0
DYD2_k127_1784142_0 COG0477 Permeases of the major facilitator superfamily K16211 - - 2.7e-211 664.0
DYD2_k127_1784142_1 Fumarylacetoacetase K01555 - 3.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 598.0
DYD2_k127_1784142_2 conserved domain frequently associated with peptide methionine sulfoxide reductase K07305 - 1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000000004472 229.0
DYD2_k127_1784142_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000005488 216.0
DYD2_k127_1784142_4 Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate K00451 - 1.13.11.5 0.00000000000000000000000000000000003585 134.0
DYD2_k127_1791112_0 Methylmalonyl-CoA mutase K01847 - 5.4.99.2 0.0 1058.0
DYD2_k127_1791112_1 acetyl propionyl-CoA carboxylase, alpha subunit K01965 - 6.4.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000584 247.0
DYD2_k127_1793994_0 Belongs to the transketolase family K00615 - 2.2.1.1 1.413e-321 994.0
DYD2_k127_1793994_1 ATPase with chaperone activity K07391 - - 5.378e-268 831.0
DYD2_k127_1793994_10 permease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001884 504.0
DYD2_k127_1793994_11 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005869 488.0
DYD2_k127_1793994_12 Putative peptidoglycan binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006594 449.0
DYD2_k127_1793994_13 Inositol monophosphatase K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001645 443.0
DYD2_k127_1793994_14 Catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate in glycolysis K01623 - 4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001346 422.0
DYD2_k127_1793994_15 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002291 419.0
DYD2_k127_1793994_16 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002882 346.0
DYD2_k127_1793994_17 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004326 342.0
DYD2_k127_1793994_18 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001733 324.0
DYD2_k127_1793994_19 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005538 316.0
DYD2_k127_1793994_2 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 1.449e-231 729.0
DYD2_k127_1793994_20 Glutathione S-transferase K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002223 316.0
DYD2_k127_1793994_21 Outer membrane protein beta-barrel domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005814 313.0
DYD2_k127_1793994_22 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002839 306.0
DYD2_k127_1793994_23 Cell Wall Hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000211 301.0
DYD2_k127_1793994_24 Domain of unknown function (DUF4136) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005619 267.0
DYD2_k127_1793994_25 import inner membrane translocase, subunit Tim44 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006495 261.0
DYD2_k127_1793994_26 Cupin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001555 250.0
DYD2_k127_1793994_27 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000003344 233.0
DYD2_k127_1793994_28 COG0739 Membrane proteins related to metalloendopeptidases K21472 - - 0.0000000000000000000000000000000000000000000000000000000000000000001032 236.0
DYD2_k127_1793994_29 Polysaccharide biosynthesis/export protein K01991 - - 0.00000000000000000000000000000000000000000000000000000000000004415 219.0
DYD2_k127_1793994_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 2.543e-228 717.0
DYD2_k127_1793994_30 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.0000000000000000000000000000000000000000000000000000000000288 213.0
DYD2_k127_1793994_31 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000256 201.0
DYD2_k127_1793994_32 NADH dehydrogenase K00334 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000117 194.0
DYD2_k127_1793994_33 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.0000000000000000000000000000000000000000000000001366 182.0
DYD2_k127_1793994_34 5-formyltetrahydrofolate cyclo-ligase K01934 - 6.3.3.2 0.000000000000000000000000000000000000000000000431 174.0
DYD2_k127_1793994_35 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.0000000000000000000000000000000000456 138.0
DYD2_k127_1793994_36 protein conserved in bacteria - - - 0.0000000000000000000000000000000001488 139.0
DYD2_k127_1793994_37 Binds directly to 16S ribosomal RNA K02968 - - 0.00000000000000000000000000000005569 128.0
DYD2_k127_1793994_38 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.00000000000000000000000000007992 119.0
DYD2_k127_1793994_39 Protein of unknown function DUF72 - - - 0.00000000000000000000000003328 114.0
DYD2_k127_1793994_4 Belongs to the phosphoglycerate kinase family K00927 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.2.3 3.111e-215 673.0
DYD2_k127_1793994_40 - - - - 0.00000000000000000000009537 105.0
DYD2_k127_1793994_41 Protein of unknown function (DUF2842) - - - 0.000000000000000000006597 93.0
DYD2_k127_1793994_42 - - - - 0.000000003289 63.0
DYD2_k127_1793994_5 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0036094,GO:0043891,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.2.1.12 2.608e-195 611.0
DYD2_k127_1793994_6 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004027 588.0
DYD2_k127_1793994_7 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003945 532.0
DYD2_k127_1793994_8 membrane-bound lytic murein transglycosylase K08304 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000182 530.0
DYD2_k127_1793994_9 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004407 512.0
DYD2_k127_1798820_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 1797.0
DYD2_k127_1798820_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1453.0
DYD2_k127_1798820_10 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000188 453.0
DYD2_k127_1798820_11 Gluconolactonase K14274 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003899 339.0
DYD2_k127_1798820_12 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002019 310.0
DYD2_k127_1798820_13 Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity K01118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004092 256.0
DYD2_k127_1798820_14 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.000000000000000000000000000000000000000000000000000000000000000000003427 241.0
DYD2_k127_1798820_15 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000009716 242.0
DYD2_k127_1798820_16 membrane protein (homolog of Drosophila rhomboid) - - - 0.000000000000000000000000000000000000000000000000000000000003975 220.0
DYD2_k127_1798820_17 Yqey-like protein K09117 - - 0.00000000000000000000000000000000000000000000000000000000003599 208.0
DYD2_k127_1798820_18 Protein of unknown function, DUF488 - - - 0.000000000000000000000000000000000000000000000000000000004243 203.0
DYD2_k127_1798820_19 HxlR-like helix-turn-helix - - - 0.0000000000000000000000000000000000000000000000000001182 190.0
DYD2_k127_1798820_2 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 6.753e-232 732.0
DYD2_k127_1798820_20 Protein required for attachment to host cells - - - 0.000000000000000000000000000000000000000000000000002274 187.0
DYD2_k127_1798820_21 Septum formation initiator - - - 0.000000000000000000000000000000000000003035 148.0
DYD2_k127_1798820_22 Sensors of blue-light using FAD - - - 0.000000000000000000000000000000000000003451 151.0
DYD2_k127_1798820_23 EF hand - - - 0.000000000000000000000000000000000004536 141.0
DYD2_k127_1798820_24 ergosterol biosynthetic process K02291 - 2.5.1.32,2.5.1.99 0.00000000000000000000000000000003231 134.0
DYD2_k127_1798820_25 Domain of unknown function (DUF4170) - - - 0.00000000000000000000000000000103 122.0
DYD2_k127_1798820_26 - - - - 0.00000000000000000000000009287 113.0
DYD2_k127_1798820_27 - - - - 0.00000000000000000000002702 107.0
DYD2_k127_1798820_28 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.00000000000000000000003746 106.0
DYD2_k127_1798820_29 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.000000003874 63.0
DYD2_k127_1798820_3 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 - 2.1.1.74 3.678e-228 712.0
DYD2_k127_1798820_30 Protein of unknown function (DUF3618) - - - 0.0000003475 60.0
DYD2_k127_1798820_31 Protein of unknown function (DUF3618) - - - 0.0004153 49.0
DYD2_k127_1798820_4 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00162 - 1.2.4.1 1.659e-222 700.0
DYD2_k127_1798820_5 Sugar (and other) transporter K08369 - - 1.739e-218 689.0
DYD2_k127_1798820_6 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 6.179e-216 680.0
DYD2_k127_1798820_7 Belongs to the CarA family K01956 - 6.3.5.5 2.839e-195 614.0
DYD2_k127_1798820_8 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002933 597.0
DYD2_k127_1798820_9 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001672 480.0
DYD2_k127_1818889_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0 1027.0
DYD2_k127_1818889_1 PFAM CMP dCMP deaminase zinc-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002402 289.0
DYD2_k127_1818889_2 Phage derived protein Gp49-like (DUF891) - - - 0.00000000000000000000000000000000000000000000965 165.0
DYD2_k127_1818889_3 Helix-turn-helix domain - - - 0.000000000000000000000002822 106.0
DYD2_k127_1818889_4 Excalibur calcium-binding domain - - - 0.0000000000000000144 87.0
DYD2_k127_1818889_5 - - - - 0.0000000001283 66.0
DYD2_k127_1818889_6 MafB19-like deaminase - - - 0.00000001359 61.0
DYD2_k127_1928026_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 4.203e-248 770.0
DYD2_k127_1928026_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 4.779e-217 683.0
DYD2_k127_1928026_10 Protein of unknown function (DUF4242) - - - 0.000000000000000000000000000000000000000000000009308 171.0
DYD2_k127_1928026_11 Preprotein translocase subunit SecG K03075 - - 0.0000000000000000000000000001447 119.0
DYD2_k127_1928026_12 domain protein - - - 0.00000000000000000000000002296 113.0
DYD2_k127_1928026_13 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.000000000000000005585 83.0
DYD2_k127_1928026_2 peptidylprolyl isomerase K01802,K03770 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004944 470.0
DYD2_k127_1928026_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 377.0
DYD2_k127_1928026_4 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007167 332.0
DYD2_k127_1928026_5 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000258 317.0
DYD2_k127_1928026_6 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001308 277.0
DYD2_k127_1928026_7 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000000000000000000000000000000000000001124 199.0
DYD2_k127_1928026_8 glyoxalase bleomycin resistance protein dioxygenase K06996 - - 0.000000000000000000000000000000000000000000000001345 177.0
DYD2_k127_1928026_9 membrane metal-binding protein K02238 - - 0.000000000000000000000000000000000000000000000002185 179.0
DYD2_k127_1958467_0 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 1.684e-233 726.0
DYD2_k127_1958467_1 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003497 515.0
DYD2_k127_1958467_10 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.000000000000000000000000000000000000000000000000000000000000000000000007906 244.0
DYD2_k127_1958467_11 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.000000000000000000000000000000000000000000000000000000000000000000001488 236.0
DYD2_k127_1958467_12 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.000000000000000000000000000000000000000000000000000000000006721 209.0
DYD2_k127_1958467_13 Involved in the binding of tRNA to the ribosomes K02946 - - 0.00000000000000000000000000000000000000000000000000000000004014 205.0
DYD2_k127_1958467_14 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.00000000000000000000000000000000000000000000000000005066 188.0
DYD2_k127_1958467_15 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.0000000000000000000000000000000000000000000000000003394 184.0
DYD2_k127_1958467_16 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.00000000000000000000000000000000000000000000000001308 180.0
DYD2_k127_1958467_17 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.0000000000000000000000000000000000000000000006325 168.0
DYD2_k127_1958467_18 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.00000000000000000000000000000000000000111 156.0
DYD2_k127_1958467_19 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.000000000000000000000000000000000000005344 149.0
DYD2_k127_1958467_2 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007061 448.0
DYD2_k127_1958467_20 Ribosomal protein L30 K02907 - - 0.000000000000000000000001421 104.0
DYD2_k127_1958467_21 Binds to the 23S rRNA K02876 - - 0.00000000000000000000005909 100.0
DYD2_k127_1958467_22 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.000000000000000000008261 96.0
DYD2_k127_1958467_3 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001347 376.0
DYD2_k127_1958467_4 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002227 349.0
DYD2_k127_1958467_5 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000984 347.0
DYD2_k127_1958467_6 Forms part of the polypeptide exit tunnel K02926 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002998 324.0
DYD2_k127_1958467_7 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002272 302.0
DYD2_k127_1958467_8 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002893 291.0
DYD2_k127_1958467_9 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005189 279.0
DYD2_k127_2011117_0 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 0.0 1272.0
DYD2_k127_2011117_1 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.0 1066.0
DYD2_k127_2011117_10 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 429.0
DYD2_k127_2011117_11 Subtilase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000735 420.0
DYD2_k127_2011117_12 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002306 390.0
DYD2_k127_2011117_13 Electron transfer flavoprotein K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004551 385.0
DYD2_k127_2011117_14 CarD family transcriptional regulator K07736 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 306.0
DYD2_k127_2011117_15 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008533 297.0
DYD2_k127_2011117_16 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004149 286.0
DYD2_k127_2011117_17 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005417 280.0
DYD2_k127_2011117_18 molecular chaperone - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006529 264.0
DYD2_k127_2011117_19 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.000000000000000000000000000000000000000000000000000000000000000006063 228.0
DYD2_k127_2011117_2 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.0 1032.0
DYD2_k127_2011117_20 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000000000000000000000000006552 214.0
DYD2_k127_2011117_21 ribonuclease E activity - - - 0.00000000000000000000000000000000000000000000000000000000001782 217.0
DYD2_k127_2011117_22 Domain of unknown function (DUF4956) - - - 0.000000000000000000000000000000000000000000000000000000574 200.0
DYD2_k127_2011117_23 AntiSigma factor - - - 0.00000000000000000000000000000000000000000000009464 179.0
DYD2_k127_2011117_24 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.0000000000000000000000000000000000000000006128 157.0
DYD2_k127_2011117_25 Belongs to the BolA IbaG family K05527 - - 0.000000000000000000000000000001501 123.0
DYD2_k127_2011117_26 Putative auto-transporter adhesin, head GIN domain - - - 0.00000000000000000000000001419 119.0
DYD2_k127_2011117_27 Putative auto-transporter adhesin, head GIN domain - - - 0.0000000000000000000001576 107.0
DYD2_k127_2011117_28 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.00000000000001603 79.0
DYD2_k127_2011117_29 Resolvase - - - 0.00000003876 55.0
DYD2_k127_2011117_3 Autotransporter beta-domain - - - 5.027e-312 993.0
DYD2_k127_2011117_4 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 6.627e-220 686.0
DYD2_k127_2011117_5 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003619 517.0
DYD2_k127_2011117_6 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000226 511.0
DYD2_k127_2011117_7 Electron transfer flavoprotein K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004966 482.0
DYD2_k127_2011117_8 ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000657 484.0
DYD2_k127_2011117_9 Histone deacetylase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004875 463.0
DYD2_k127_2063365_0 Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 2.136e-314 979.0
DYD2_k127_2063365_1 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 1.867e-304 937.0
DYD2_k127_2063365_10 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 3.459e-203 645.0
DYD2_k127_2063365_11 Histidine kinase K14980 - 2.7.13.3 8.536e-199 635.0
DYD2_k127_2063365_12 rod shape-determining protein MreB K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003386 600.0
DYD2_k127_2063365_13 peptidylprolyl isomerase K03771 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003824 566.0
DYD2_k127_2063365_14 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009142 539.0
DYD2_k127_2063365_15 DNA recombination protein K09760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008616 544.0
DYD2_k127_2063365_16 Belongs to the Orn Lys Arg decarboxylase class-II family K01586 - 4.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007711 534.0
DYD2_k127_2063365_17 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 524.0
DYD2_k127_2063365_18 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 - 1.1.1.262 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004599 518.0
DYD2_k127_2063365_19 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008973 522.0
DYD2_k127_2063365_2 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 1.423e-298 921.0
DYD2_k127_2063365_20 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 - 2.1.1.176 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 482.0
DYD2_k127_2063365_21 COG0330 Membrane protease subunits, stomatin prohibitin homologs - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003253 478.0
DYD2_k127_2063365_22 involved in chromosome partitioning K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009325 417.0
DYD2_k127_2063365_23 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003295 403.0
DYD2_k127_2063365_24 Protein of unknown function (DUF3089) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004663 410.0
DYD2_k127_2063365_25 Involved in formation and maintenance of cell shape K03570 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000134 402.0
DYD2_k127_2063365_26 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 392.0
DYD2_k127_2063365_27 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005429 389.0
DYD2_k127_2063365_28 Displays ATPase and GTPase activities K06958 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003429 381.0
DYD2_k127_2063365_29 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 381.0
DYD2_k127_2063365_3 protein conserved in bacteria - - - 2.035e-268 838.0
DYD2_k127_2063365_30 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 375.0
DYD2_k127_2063365_31 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002562 383.0
DYD2_k127_2063365_32 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004059 375.0
DYD2_k127_2063365_33 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005558 363.0
DYD2_k127_2063365_34 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K14981 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 357.0
DYD2_k127_2063365_35 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001823 355.0
DYD2_k127_2063365_36 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003232 334.0
DYD2_k127_2063365_37 Sporulation related domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005076 327.0
DYD2_k127_2063365_38 phosphoserine phosphatase K01079 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001937 295.0
DYD2_k127_2063365_39 Belongs to the HpcH HpaI aldolase family K01644 - 4.1.3.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005466 280.0
DYD2_k127_2063365_4 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 1.783e-255 801.0
DYD2_k127_2063365_40 ATPase involved in DNA replication - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009858 276.0
DYD2_k127_2063365_41 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002105 267.0
DYD2_k127_2063365_42 Crp-like helix-turn-helix domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009379 262.0
DYD2_k127_2063365_43 FOG TPR repeat, SEL1 subfamily K07126 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004901 271.0
DYD2_k127_2063365_44 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.000000000000000000000000000000000000000000000000000000000000000000000009108 244.0
DYD2_k127_2063365_45 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.0000000000000000000000000000000000000000000000000000000000000000000005413 243.0
DYD2_k127_2063365_46 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.000000000000000000000000000000000000000000000000000000000000000000001936 241.0
DYD2_k127_2063365_47 PTS fructose transporter subunit IIA K02793 - 2.7.1.191 0.0000000000000000000000000000000000000000000000000000000000000000587 224.0
DYD2_k127_2063365_48 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.000000000000000000000000000000000000000000000000000000000000003065 217.0
DYD2_k127_2063365_49 VIT family - - - 0.0000000000000000000000000000000000000000000000000000000000003305 222.0
DYD2_k127_2063365_5 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 6.598e-251 786.0
DYD2_k127_2063365_50 rod shape-determining protein MreD K03571 - - 0.0000000000000000000000000000000000000000000000000000000000006256 214.0
DYD2_k127_2063365_51 Serine kinase of the HPr protein, regulates carbohydrate metabolism - - - 0.000000000000000000000000000000000000000000000000000000001665 204.0
DYD2_k127_2063365_52 DNA polymerase III K02339 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000005089 198.0
DYD2_k127_2063365_53 - - - - 0.0000000000000000000000000000000000000000000000000000001434 201.0
DYD2_k127_2063365_54 - - - - 0.0000000000000000000000000000000000000000000000000004435 191.0
DYD2_k127_2063365_55 Membrane protein implicated in regulation of membrane protease activity K07340 - - 0.0000000000000000000000000000000000000000000008607 190.0
DYD2_k127_2063365_56 Ferredoxin - - - 0.00000000000000000000000000000000000000000001143 171.0
DYD2_k127_2063365_57 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate - - - 0.000000000000000000000000000000000000001981 150.0
DYD2_k127_2063365_58 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000015 148.0
DYD2_k127_2063365_59 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.00000000000000000000000000000000000004608 147.0
DYD2_k127_2063365_6 Penicillin-binding Protein K05515 - 3.4.16.4 6.563e-246 777.0
DYD2_k127_2063365_60 Type IV pilus biogenesis stability protein PilW - - - 0.0000000000000000000000000000000000002286 147.0
DYD2_k127_2063365_61 META domain - - - 0.000000000000000000000000000000000000459 149.0
DYD2_k127_2063365_62 Belongs to the Nudix hydrolase family - - - 0.0000000000000000000000000000009839 127.0
DYD2_k127_2063365_63 COG1925 Phosphotransferase system, HPr-related proteins K11189 - - 0.00000000000000000000000000003309 125.0
DYD2_k127_2063365_64 acyl carrier protein - - - 0.00000000000000000000005642 101.0
DYD2_k127_2063365_65 - - - - 0.00000000272 64.0
DYD2_k127_2063365_7 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 1.613e-242 763.0
DYD2_k127_2063365_8 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II - - - 3.404e-213 673.0
DYD2_k127_2063365_9 Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides K03684 - 3.1.13.5 1.297e-203 638.0
DYD2_k127_20856_0 Transposase DDE domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002023 419.0
DYD2_k127_2086699_0 COG0410 ABC-type branched-chain amino acid transport systems ATPase component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003702 297.0
DYD2_k127_2086699_1 ATPases associated with a variety of cellular activities K01995 - - 0.00000000000000000000000000000000000000000001312 164.0
DYD2_k127_2086699_2 - - - - 0.0000000000000000000000000000000000003079 151.0
DYD2_k127_2086699_3 COG2771 DNA-binding HTH domain-containing proteins - - - 0.00000000000000000000000000000001906 133.0
DYD2_k127_2099934_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.0 1202.0
DYD2_k127_2099934_1 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 - - 0.0 1147.0
DYD2_k127_2099934_10 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.0000000000000000000000000000000000000000000000000000000000000000009769 233.0
DYD2_k127_2099934_11 Protein of unknown function (DUF1203) - - - 0.0000000000000000000000000000000000000000000000000001189 190.0
DYD2_k127_2099934_12 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000000000000000004205 142.0
DYD2_k127_2099934_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 1.907e-291 900.0
DYD2_k127_2099934_3 GGDEF domain - - - 4.102e-240 754.0
DYD2_k127_2099934_4 Belongs to the SAICAR synthetase family K01923 - 6.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 489.0
DYD2_k127_2099934_5 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003563 478.0
DYD2_k127_2099934_6 Metal binding domain of Ada K10778 - 2.1.1.63 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003611 453.0
DYD2_k127_2099934_7 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000793 412.0
DYD2_k127_2099934_8 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002687 410.0
DYD2_k127_2099934_9 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000174 308.0
DYD2_k127_2144807_0 ABC-type multidrug transport system, ATPase and permease K06147 - - 1.925e-245 770.0
DYD2_k127_2171673_0 DNA helicase K03657 - 3.6.4.12 0.0 1024.0
DYD2_k127_2171673_1 Histidine kinase K13587 - 2.7.13.3 2.426e-318 992.0
DYD2_k127_2171673_10 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005642 425.0
DYD2_k127_2171673_11 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase K01627 - 2.5.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004586 420.0
DYD2_k127_2171673_12 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007508 401.0
DYD2_k127_2171673_13 Belongs to the DegT DnrJ EryC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 374.0
DYD2_k127_2171673_14 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000314 319.0
DYD2_k127_2171673_15 glycosyl transferase family 8 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003876 308.0
DYD2_k127_2171673_16 3-deoxy-manno-octulosonate cytidylyltransferase K00979 - 2.7.7.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003793 276.0
DYD2_k127_2171673_17 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001772 250.0
DYD2_k127_2171673_18 sugar phosphatases of the HAD superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001866 253.0
DYD2_k127_2171673_19 protein conserved in bacteria K09928 - - 0.00000000000000000000000000000000000000000000000000000000000000000000201 240.0
DYD2_k127_2171673_2 peptidase M13 K07386 - - 2.548e-312 969.0
DYD2_k127_2171673_20 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.000000000000000000000000000000000000000000000000000000000000000000004898 251.0
DYD2_k127_2171673_21 COG1073 hydrolases of the alpha beta superfamily K06889 - - 0.00000000000000000000000000000000000000000000000000000000000000000001318 241.0
DYD2_k127_2171673_22 Methyltransferase small domain - - - 0.000000000000000000000000000000000000000000000000000000000000000007947 234.0
DYD2_k127_2171673_23 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.0000000000000000000000000000000000000000000000000000000005578 207.0
DYD2_k127_2171673_24 Hexapeptide repeat of succinyl-transferase - - - 0.0000000000000000000000000000000000000000000000000000000006752 204.0
DYD2_k127_2171673_25 Protein of unknown function (DUF1465) K13592 - - 0.000000000000000000000000000000000000000000000000000000002529 206.0
DYD2_k127_2171673_26 Thioesterase-like superfamily K07107 - - 0.0000000000000000000000000000000000000000000000000000109 192.0
DYD2_k127_2171673_27 SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains. - - - 0.0000000000000000000000000000000000000000000006722 172.0
DYD2_k127_2171673_28 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000152 164.0
DYD2_k127_2171673_29 Mitochondrial fission ELM1 K07276 - - 0.0000000000000025 83.0
DYD2_k127_2171673_3 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08309 - - 1.33e-227 723.0
DYD2_k127_2171673_30 small protein containing a coiled-coil domain - - - 0.0000000000007826 70.0
DYD2_k127_2171673_31 Small protein - - - 0.00000000001729 66.0
DYD2_k127_2171673_4 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 2.427e-204 639.0
DYD2_k127_2171673_5 Sodium:dicarboxylate symporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001705 568.0
DYD2_k127_2171673_6 2-nitropropane dioxygenase K00459 - 1.13.12.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001955 519.0
DYD2_k127_2171673_7 Belongs to the peptidase M24B family K01271 - 3.4.13.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002304 521.0
DYD2_k127_2171673_8 alcohol dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002689 481.0
DYD2_k127_2171673_9 Major facilitator superfamily K07552 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008125 485.0
DYD2_k127_2187729_0 Rieske [2Fe-2S] domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007209 327.0
DYD2_k127_2187729_1 Rdx family K07401 - - 0.0000000000000000000000000000000000000002266 151.0
DYD2_k127_2199918_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1431.0
DYD2_k127_2199918_1 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 4.957e-259 815.0
DYD2_k127_2199918_10 acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005771 526.0
DYD2_k127_2199918_11 Fatty acid desaturase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003464 475.0
DYD2_k127_2199918_12 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004264 463.0
DYD2_k127_2199918_13 YjgP YjgQ family K11720 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002175 466.0
DYD2_k127_2199918_14 Diacylglycerol kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007377 461.0
DYD2_k127_2199918_15 exodeoxyribonuclease III K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002054 457.0
DYD2_k127_2199918_16 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002418 442.0
DYD2_k127_2199918_17 molecular chaperone - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000052 439.0
DYD2_k127_2199918_18 acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002372 426.0
DYD2_k127_2199918_19 ribonuclease BN K07058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 415.0
DYD2_k127_2199918_2 Histidine kinase - - - 1.157e-252 795.0
DYD2_k127_2199918_20 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family K13283 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003302 387.0
DYD2_k127_2199918_21 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004406 347.0
DYD2_k127_2199918_22 PhzC PhzF - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001797 335.0
DYD2_k127_2199918_23 amino acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002926 327.0
DYD2_k127_2199918_24 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001531 312.0
DYD2_k127_2199918_25 Ribosomal RNA adenine dimethylase K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001184 282.0
DYD2_k127_2199918_26 Protein of unknown function (DUF541) K09807 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003477 251.0
DYD2_k127_2199918_27 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.00000000000000000000000000000000000000000000000000000281 192.0
DYD2_k127_2199918_28 Nudix hydrolase - - - 0.00000000000000000000000000000000000000000000000000003282 192.0
DYD2_k127_2199918_29 Protein of unknown function (DUF1153) - - - 0.00000000000000000000000000000000000000000000000007348 178.0
DYD2_k127_2199918_3 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 7.175e-243 754.0
DYD2_k127_2199918_30 Belongs to the HesB IscA family - - - 0.000000000000000000000000000000000000000000003107 166.0
DYD2_k127_2199918_31 Acetyltransferase (GNAT) family K03824 - - 0.0000000000000000000000000000000000557 141.0
DYD2_k127_2199918_32 Transglycosylase associated protein - - - 0.00000000000000000000000000000001337 128.0
DYD2_k127_2199918_33 Transglycosylase associated protein - - - 0.0000000000000000000000000000006979 124.0
DYD2_k127_2199918_34 Phasin protein - - - 0.00000000000000000000000000005334 119.0
DYD2_k127_2199918_35 Acylphosphatase K01512 GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818 3.6.1.7 0.000000000000000000008822 97.0
DYD2_k127_2199918_36 Acetyltransferase (GNAT) domain - - - 0.000000000003065 76.0
DYD2_k127_2199918_37 acyl carrier protein - - - 0.000000003315 59.0
DYD2_k127_2199918_4 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 5.218e-238 739.0
DYD2_k127_2199918_5 COG0156 7-keto-8-aminopelargonate synthetase and related enzymes K00639,K00652 - 2.3.1.29,2.3.1.47 7.272e-224 700.0
DYD2_k127_2199918_6 membrane - - - 7.763e-198 624.0
DYD2_k127_2199918_7 YjgP YjgQ family K07091 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 566.0
DYD2_k127_2199918_8 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008237 551.0
DYD2_k127_2199918_9 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001926 547.0
DYD2_k127_2241896_0 COG0145 N-methylhydantoinase A acetone carboxylase, beta subunit K01469 - 3.5.2.9 0.0 1648.0
DYD2_k127_2241896_1 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K14162 - 2.7.7.7 0.0 1568.0
DYD2_k127_2241896_10 COG1502 Phosphatidylserine phosphatidylglycerophosphate cardiolipi n synthases and related enzymes - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005353 552.0
DYD2_k127_2241896_11 ATP dependent DNA ligase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 445.0
DYD2_k127_2241896_12 Protein of unknown function (DUF2891) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008588 452.0
DYD2_k127_2241896_13 imidazolonepropionase activity K01468 - 3.5.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006073 438.0
DYD2_k127_2241896_14 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006492 405.0
DYD2_k127_2241896_15 Arginase family K01480 - 3.5.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000317 381.0
DYD2_k127_2241896_16 protein conserved in bacteria K09781 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 354.0
DYD2_k127_2241896_17 Copper resistance K07233 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007302 342.0
DYD2_k127_2241896_18 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006108 271.0
DYD2_k127_2241896_19 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002288 256.0
DYD2_k127_2241896_2 P-type ATPase K17686 - 3.6.3.54 0.0 1163.0
DYD2_k127_2241896_20 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001323 254.0
DYD2_k127_2241896_21 Flavin reductase like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000009327 237.0
DYD2_k127_2241896_22 2OG-Fe(II) oxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000003849 230.0
DYD2_k127_2241896_23 Iron-sulfur cluster assembly protein K02612 - - 0.00000000000000000000000000000000000000000000000000000000000009432 216.0
DYD2_k127_2241896_24 SOS response K14160 - - 0.0000000000000000000000000000000000000000000000003572 185.0
DYD2_k127_2241896_25 Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP K01004 - 2.7.8.24 0.000000000000000000000000000000000000000000000001295 183.0
DYD2_k127_2241896_26 MerR family transcriptional regulator K19591 - - 0.000000000000000000000000000000000000000000000002078 183.0
DYD2_k127_2241896_27 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.000000000000000000000000003765 116.0
DYD2_k127_2241896_28 Uncharacterized protein conserved in bacteria (DUF2147) - - - 0.000000000000000000006128 96.0
DYD2_k127_2241896_29 COG1961 Site-specific recombinases, DNA invertase Pin homologs - - - 0.000000000005531 71.0
DYD2_k127_2241896_3 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 2.306e-320 985.0
DYD2_k127_2241896_30 Bacteriophage replication gene A protein (GPA) - - - 0.0000000003705 66.0
DYD2_k127_2241896_31 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.000000155 57.0
DYD2_k127_2241896_4 Copper-binding protein - - - 6.39e-248 779.0
DYD2_k127_2241896_5 Histidine K01745 - 4.3.1.3 7.266e-227 712.0
DYD2_k127_2241896_6 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 5.731e-208 653.0
DYD2_k127_2241896_7 Belongs to the thiolase family - - - 1.358e-198 624.0
DYD2_k127_2241896_8 Nucleotidyltransferase DNA polymerase involved in DNA repair K14161 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009956 572.0
DYD2_k127_2241896_9 4-hydroxyphenylpyruvate dioxygenase K00457 - 1.13.11.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 562.0
DYD2_k127_2242826_0 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 7.406e-252 811.0
DYD2_k127_2242826_1 PFAM amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001842 425.0
DYD2_k127_2242826_10 Transcriptional regulatory protein, C terminal - - - 0.0001924 46.0
DYD2_k127_2242826_2 LytTr DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001976 250.0
DYD2_k127_2242826_3 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000004856 131.0
DYD2_k127_2242826_4 SnoaL-like polyketide cyclase - - - 0.0000000000000000000000005322 110.0
DYD2_k127_2242826_5 - - - - 0.000000000000000000006394 100.0
DYD2_k127_2242826_6 Domain of unknown function (DUF4440) - - - 0.00000000000000000003633 98.0
DYD2_k127_2242826_7 Sulfatase - - - 0.0000000007658 61.0
DYD2_k127_2242826_9 Belongs to the 'phage' integrase family - - - 0.0000003934 51.0
DYD2_k127_2255516_0 COG3335 Transposase and inactivated derivatives - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003048 509.0
DYD2_k127_2255516_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001913 327.0
DYD2_k127_2255516_2 efflux transmembrane transporter activity - - - 0.0000000000000000000000664 102.0
DYD2_k127_2264551_0 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002624 273.0
DYD2_k127_2264551_1 Domain of unknown function (DUF202) - - - 0.00000000000000000000000000000000000002834 147.0
DYD2_k127_2264551_2 Protein of unknown function (FYDLN_acid) - - - 0.0000000000000000000000000000000000001096 145.0
DYD2_k127_2264551_4 - - - - 0.0003575 48.0
DYD2_k127_2379262_0 Type II/IV secretion system protein K02283 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002412 422.0
DYD2_k127_2379262_1 pilus assembly protein K12510 - - 0.000000000000000001538 96.0
DYD2_k127_2460238_0 TonB dependent receptor - - - 0.0 1248.0
DYD2_k127_2460238_1 protein involved in exopolysaccharide biosynthesis - - - 7.063e-241 764.0
DYD2_k127_2460238_10 membrane-associated protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002598 307.0
DYD2_k127_2460238_11 Prolyl 4-hydroxylase alpha subunit homologues. K07336 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004149 286.0
DYD2_k127_2460238_12 polysaccharide export K01991 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007321 287.0
DYD2_k127_2460238_13 Predicted integral membrane protein (DUF2189) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003078 289.0
DYD2_k127_2460238_14 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001368 280.0
DYD2_k127_2460238_15 COG0639 Diadenosine tetraphosphatase and related serine threonine protein phosphatases K07313 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002853 281.0
DYD2_k127_2460238_16 Bacterial sugar transferase K13012 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000911 273.0
DYD2_k127_2460238_17 calcium- and calmodulin-responsive adenylate cyclase activity K01406,K07004 - 3.4.24.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000002086 292.0
DYD2_k127_2460238_18 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000009002 256.0
DYD2_k127_2460238_19 Glutathione-dependent formaldehyde-activating enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000127 226.0
DYD2_k127_2460238_2 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001463 608.0
DYD2_k127_2460238_20 O-Antigen ligase - - - 0.000000000000000000000000000000000000000000000000000000000003707 220.0
DYD2_k127_2460238_21 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.000000000000000000000000000000000000000000000000000000000005871 212.0
DYD2_k127_2460238_22 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.000000000000000000000000000000000000000000000000000000001409 202.0
DYD2_k127_2460238_23 Belongs to the P(II) protein family K04751 - - 0.0000000000000000000000000000000000000000000000000000000765 198.0
DYD2_k127_2460238_24 - - - - 0.0000000000000000000000000000000000000000000000000000003038 198.0
DYD2_k127_2460238_25 glycosyl transferase group 1 K13004,K21011 - - 0.0000000000000000000000000000000000000000000000000004413 194.0
DYD2_k127_2460238_26 - - - - 0.000000000000000000000000000000000000000000000000001231 196.0
DYD2_k127_2460238_27 Glycosyl transferase 4-like - - - 0.000000000000000000000000000000000000000000005641 167.0
DYD2_k127_2460238_29 Belongs to the UPF0102 family K07460 - - 0.0000000000000000000000000000000000000009757 154.0
DYD2_k127_2460238_3 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006784 565.0
DYD2_k127_2460238_30 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.0000000000000000000000000000000000003136 141.0
DYD2_k127_2460238_31 - - - - 0.000000000000000000000000000008978 122.0
DYD2_k127_2460238_32 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0000000000000000000000000001463 135.0
DYD2_k127_2460238_33 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.000000007869 70.0
DYD2_k127_2460238_4 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000529 488.0
DYD2_k127_2460238_5 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002521 481.0
DYD2_k127_2460238_6 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000887 470.0
DYD2_k127_2460238_7 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001832 397.0
DYD2_k127_2460238_8 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004637 342.0
DYD2_k127_2460238_9 Nucleotidyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005858 340.0
DYD2_k127_2480089_0 Belongs to the glycosyl hydrolase 3 family K05349 - 3.2.1.21 0.0 1095.0
DYD2_k127_2480089_1 Belongs to the glycosyl hydrolase 31 family - - - 0.0 1059.0
DYD2_k127_2480089_10 Belongs to the 5'-nucleotidase family K01081 - 3.1.3.5 1.137e-215 684.0
DYD2_k127_2480089_11 Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations K01241 - 3.2.2.4 3.469e-211 665.0
DYD2_k127_2480089_12 Peptidase, M28 - - - 4.922e-206 650.0
DYD2_k127_2480089_13 Uncharacterized ACR, YdiU/UPF0061 family - - - 1.328e-195 623.0
DYD2_k127_2480089_14 oxidase, subunit K00426 - 1.10.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002413 519.0
DYD2_k127_2480089_15 MFS/sugar transport protein K03292 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004881 496.0
DYD2_k127_2480089_16 Methylmalonate-semialdehyde dehydrogenase K00140 - 1.2.1.18,1.2.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000089 437.0
DYD2_k127_2480089_17 helix_turn _helix lactose operon repressor K02529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004896 389.0
DYD2_k127_2480089_18 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001188 379.0
DYD2_k127_2480089_19 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003998 325.0
DYD2_k127_2480089_2 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.0 1031.0
DYD2_k127_2480089_20 of the drug metabolite transporter (DMT) superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 325.0
DYD2_k127_2480089_21 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001013 284.0
DYD2_k127_2480089_22 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002194 248.0
DYD2_k127_2480089_23 NADPH-dependent FMN reductase K19784 - - 0.0000000000000000000000000000000000000000000000000000000001506 217.0
DYD2_k127_2480089_24 SCO1/SenC K07152 - - 0.0000000000000000000000000000000000000000000000000000000002645 212.0
DYD2_k127_2480089_25 S1/P1 Nuclease - - - 0.0000000000000000000000000000000000000000000000004141 179.0
DYD2_k127_2480089_26 Copper chaperone PCu(A)C K09796 - - 0.00000000000000000000000003023 118.0
DYD2_k127_2480089_27 - - - - 0.00000000000000000003596 94.0
DYD2_k127_2480089_28 - - - - 0.00000000000002208 81.0
DYD2_k127_2480089_29 Protein of unknown function (DUF2474) - - - 0.0001482 51.0
DYD2_k127_2480089_3 Carboxypeptidase regulatory-like domain - - - 4.389e-295 938.0
DYD2_k127_2480089_4 Fibronectin type 3 domain - - - 1.347e-269 844.0
DYD2_k127_2480089_5 oxidase, subunit K00425 - 1.10.3.14 1.216e-249 777.0
DYD2_k127_2480089_6 Putative glucoamylase - - - 6.477e-243 760.0
DYD2_k127_2480089_7 Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate K06447 - 1.2.1.71 3.251e-240 751.0
DYD2_k127_2480089_8 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 1.055e-232 731.0
DYD2_k127_2480089_9 Tryptophan halogenase K14266 - 1.14.19.9 3.801e-216 682.0
DYD2_k127_2516498_0 belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 1.413e-213 673.0
DYD2_k127_2516498_1 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 1.828e-199 624.0
DYD2_k127_2516498_10 COG3524 Capsule polysaccharide export protein K10107 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 431.0
DYD2_k127_2516498_11 Phytanoyl-CoA dioxygenase (PhyH) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005137 421.0
DYD2_k127_2516498_12 Aminotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001853 421.0
DYD2_k127_2516498_13 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005517 402.0
DYD2_k127_2516498_14 polysaccharide K01991 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003372 389.0
DYD2_k127_2516498_15 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002235 366.0
DYD2_k127_2516498_16 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002697 349.0
DYD2_k127_2516498_17 ABC transporter K09689 - 3.6.3.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004191 331.0
DYD2_k127_2516498_18 ABC-2 type transporter K09688 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006743 314.0
DYD2_k127_2516498_19 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003454 286.0
DYD2_k127_2516498_2 Polysaccharide biosynthesis protein K07265 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005684 525.0
DYD2_k127_2516498_20 CHASE2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005626 280.0
DYD2_k127_2516498_21 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000001281 244.0
DYD2_k127_2516498_22 Phytanoyl-CoA dioxygenase (PhyH) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000416 250.0
DYD2_k127_2516498_23 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000003574 142.0
DYD2_k127_2516498_24 glycosyl transferase family 2 K20444 - - 0.0000000000000000000000000000000000472 146.0
DYD2_k127_2516498_25 Methyltransferase - - - 0.00000000000000000000000000000001252 136.0
DYD2_k127_2516498_26 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K16079 - - 0.0000000000000000000000000000002557 130.0
DYD2_k127_2516498_27 Glycosyl transferases group 1 - - - 0.000000000000000000000003318 119.0
DYD2_k127_2516498_28 - - - - 0.0000000000000000002071 94.0
DYD2_k127_2516498_29 glycosyl transferase family 2 - - - 0.000000000000000008914 94.0
DYD2_k127_2516498_3 Glycosyltransferase like family 2 K20444 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007364 531.0
DYD2_k127_2516498_30 PFAM Glycosyl transferase, family 2 - - - 0.00003285 55.0
DYD2_k127_2516498_4 glycosyl transferase family 8 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 492.0
DYD2_k127_2516498_5 Capsule polysaccharide K07266 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002993 488.0
DYD2_k127_2516498_6 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004305 464.0
DYD2_k127_2516498_7 L-carnitine dehydratase bile acid-inducible protein F K01796 - 5.1.99.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301 458.0
DYD2_k127_2516498_8 Glycosyltransferase like family 2 K20444 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004033 467.0
DYD2_k127_2516498_9 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003192 449.0
DYD2_k127_2521520_0 chemotaxis protein K03407 - 2.7.13.3 0.0 1049.0
DYD2_k127_2521520_1 Elongation factor G, domain IV K02355 - - 1.138e-291 909.0
DYD2_k127_2521520_10 cheY-homologous receiver domain K03413 - - 0.00000000000000000000000000000000000000000000000000000000000000000003311 239.0
DYD2_k127_2521520_11 Two component signalling adaptor domain K03408 - - 0.0000000000000000000000000000000000000000000000000000000002991 205.0
DYD2_k127_2521520_12 MaoC like domain - - - 0.00000000000000000000000000000000000000000000000002861 186.0
DYD2_k127_2521520_13 Mitochondrial fission ELM1 K07276 - - 0.0000000000000000000000000000004966 129.0
DYD2_k127_2521520_2 RNA polymerase sigma K03089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002492 511.0
DYD2_k127_2521520_3 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002878 466.0
DYD2_k127_2521520_4 N-acetylmuramoyl-L-alanine amidase K01447 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005144 402.0
DYD2_k127_2521520_5 COG1352 Methylase of chemotaxis methyl-accepting proteins K00575 - 2.1.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004899 404.0
DYD2_k127_2521520_6 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009111 404.0
DYD2_k127_2521520_7 PFAM polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004942 344.0
DYD2_k127_2521520_8 Virulence factor BrkB K07058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003692 327.0
DYD2_k127_2521520_9 Histidine phosphotransferase C-terminal domain K13588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001054 278.0
DYD2_k127_2558821_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 5.864e-318 981.0
DYD2_k127_2558821_1 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003346 451.0
DYD2_k127_2558821_2 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003698 377.0
DYD2_k127_2558821_3 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 - - 0.0000000000000000000000000000000000000000000008118 168.0
DYD2_k127_2558821_4 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000003081 114.0
DYD2_k127_2585296_0 E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate K00164 - 1.2.4.2 0.0 1484.0
DYD2_k127_2585296_1 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002728 554.0
DYD2_k127_2585296_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 530.0
DYD2_k127_2585296_3 endonuclease containing a URI domain K07461 - - 0.000000000000000000000006379 103.0
DYD2_k127_2585296_4 endonuclease containing a URI domain K07461 - - 0.000000008464 58.0
DYD2_k127_2606565_0 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0 1256.0
DYD2_k127_2607498_0 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002384 304.0
DYD2_k127_2607498_1 YHS domain - - - 0.000000000000000000000000000003874 123.0
DYD2_k127_2607498_2 Histidine kinase - - - 0.000778 46.0
DYD2_k127_2617251_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003135 379.0
DYD2_k127_2617251_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 342.0
DYD2_k127_2617251_2 ABC-2 family transporter protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001739 261.0
DYD2_k127_2617251_3 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.0000000000000000001032 89.0
DYD2_k127_2626042_0 Type II/IV secretion system protein K02283 - - 0.00000000000000000000000000000000000000000000000000000003342 206.0
DYD2_k127_2626042_1 COG4963 Flp pilus assembly protein, ATPase CpaE K02282 - - 0.00000000000000000000001829 115.0
DYD2_k127_2626042_2 Transcriptional regulatory protein K02483 - - 0.000000000000000000008752 96.0
DYD2_k127_2626042_3 cheY-homologous receiver domain - - - 0.000000000000007218 80.0
DYD2_k127_2626042_4 Flp pilus assembly protein CpaB K02279 - - 0.00000000000004095 85.0
DYD2_k127_2687870_0 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 592.0
DYD2_k127_2687870_1 secretion protein K01993 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005047 280.0
DYD2_k127_2687870_2 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000002506 238.0
DYD2_k127_2687870_3 Multicopper oxidase - - - 0.00000000000000000007797 92.0
DYD2_k127_2687870_4 ABC-2 family transporter protein - - - 0.0000000000006144 69.0
DYD2_k127_2709515_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000006576 183.0
DYD2_k127_2709515_1 transposase activity - - - 0.00000000000000000000000000000000000000001167 158.0
DYD2_k127_2709515_2 Transposase - - - 0.0000000001039 74.0
DYD2_k127_2712024_0 Transketolase, thiamine diphosphate binding domain K00163 - 1.2.4.1 0.0 1195.0
DYD2_k127_2712024_1 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 8.7e-294 913.0
DYD2_k127_2712024_10 GHKL domain K14986 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001306 450.0
DYD2_k127_2712024_11 Alanine dehydrogenase/PNT, C-terminal domain K13979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005719 429.0
DYD2_k127_2712024_12 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003173 417.0
DYD2_k127_2712024_13 Belongs to the HpcH HpaI aldolase family K01644 - 4.1.3.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 395.0
DYD2_k127_2712024_14 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 353.0
DYD2_k127_2712024_15 6-phosphogluconolactonase K01057 - 3.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003795 351.0
DYD2_k127_2712024_16 part of global network that controls expression of aerobic respiratory terminal oxidases and carbon and nitrogen metabolic enzymes K14987 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001262 274.0
DYD2_k127_2712024_17 Adenylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007543 265.0
DYD2_k127_2712024_18 Serine/threonine phosphatases, family 2C, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008718 252.0
DYD2_k127_2712024_19 dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000002354 234.0
DYD2_k127_2712024_2 Major Facilitator - - - 1.452e-227 717.0
DYD2_k127_2712024_21 Belongs to the universal stress protein A family - - - 0.00000000000000000000000000000000000000000000005625 180.0
DYD2_k127_2712024_22 transporter component K07112 - - 0.000000000000000000000000000000000000000000007353 167.0
DYD2_k127_2712024_23 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000000000000000000000005595 160.0
DYD2_k127_2712024_24 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.000000000000000000000000000000000000002914 155.0
DYD2_k127_2712024_25 Sulphur transport K07112 - - 0.0000000000000000000000000000000000000866 146.0
DYD2_k127_2712024_26 Transcriptional K22042 GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044212,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000000000000000000001129 122.0
DYD2_k127_2712024_27 - - - - 0.000000000000000000000001774 109.0
DYD2_k127_2712024_28 - - - - 0.000000000000000000000001817 109.0
DYD2_k127_2712024_29 Threonine dehydratase K01754 - 4.3.1.19 0.00000000000000001165 83.0
DYD2_k127_2712024_3 DNA mediated transformation - - - 6.592e-208 663.0
DYD2_k127_2712024_30 Stress-induced bacterial acidophilic repeat motif K06884 - - 0.0001516 48.0
DYD2_k127_2712024_31 - - - - 0.0005841 49.0
DYD2_k127_2712024_4 Protein tyrosine kinase - - - 1.733e-206 674.0
DYD2_k127_2712024_5 COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit K00167 - 1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006696 595.0
DYD2_k127_2712024_6 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K09699 - 2.3.1.168 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005341 572.0
DYD2_k127_2712024_7 COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 512.0
DYD2_k127_2712024_8 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 477.0
DYD2_k127_2712024_9 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K13584 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000164 451.0
DYD2_k127_2730710_0 Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide 5, 6-dimethylbenzimidazole phosphoribosyltransferase) K09883 - 6.6.1.2 1.533e-261 817.0
DYD2_k127_2730710_1 Aerobic cobaltochelatase subunit CobS K09882 - 6.6.1.2 1.646e-198 621.0
DYD2_k127_2730710_10 RibD C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000001048 220.0
DYD2_k127_2730710_12 Lactoylglutathione lyase K07032 - - 0.00000008084 56.0
DYD2_k127_2730710_2 Aspartyl/Asparaginyl beta-hydroxylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 479.0
DYD2_k127_2730710_3 Sulfotransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 480.0
DYD2_k127_2730710_4 Putative 2OG-Fe(II) oxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002063 445.0
DYD2_k127_2730710_5 Protein of unknown function (DUF1428) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007284 311.0
DYD2_k127_2730710_6 PFAM 3-demethylubiquinone-9 3-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002433 281.0
DYD2_k127_2730710_7 Glutathione S-transferase, N-terminal domain K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006761 278.0
DYD2_k127_2730710_8 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001616 253.0
DYD2_k127_2730710_9 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000000000000000002301 243.0
DYD2_k127_2750205_0 Polynucleotide adenylyltransferase K00970 - 2.7.7.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000936 448.0
DYD2_k127_2750205_1 protein conserved in bacteria K21470 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003489 401.0
DYD2_k127_2750205_2 Outer membrane protein beta-barrel domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001411 275.0
DYD2_k127_2750205_3 protein conserved in bacteria K09986 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005488 244.0
DYD2_k127_2750205_4 Nudix hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000002207 232.0
DYD2_k127_2750205_5 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.00000000000000000000000000000000000000004011 166.0
DYD2_k127_2763905_0 Electron transfer flavoprotein-ubiquinone oxidoreductase K00311 - 1.5.5.1 3.395e-290 898.0
DYD2_k127_2763905_1 Sugar (and other) transporter - - - 1.302e-210 662.0
DYD2_k127_2763905_10 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001209 276.0
DYD2_k127_2763905_11 Uracil-DNA glycosylase K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000003894 224.0
DYD2_k127_2763905_12 MAPEG family - - - 0.000000000000000000000000000000000000000002556 160.0
DYD2_k127_2763905_2 Belongs to the deoxyhypusine synthase family K00809 - 2.5.1.46 1.995e-201 632.0
DYD2_k127_2763905_3 Belongs to the Orn Lys Arg decarboxylase class-II family K01581 - 4.1.1.17 8.747e-199 628.0
DYD2_k127_2763905_4 DNA repair photolyase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001701 595.0
DYD2_k127_2763905_5 Peptidase, M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002307 598.0
DYD2_k127_2763905_6 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002232 576.0
DYD2_k127_2763905_7 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 529.0
DYD2_k127_2763905_8 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002876 467.0
DYD2_k127_2763905_9 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 415.0
DYD2_k127_2792312_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1337.0
DYD2_k127_2792312_1 peptidase S9 - - - 0.0 1054.0
DYD2_k127_2792312_2 membrane K12340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004091 593.0
DYD2_k127_2792312_3 Belongs to the ALAD family K01698 - 4.2.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003769 509.0
DYD2_k127_2792312_4 Diacylglycerol kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004016 329.0
DYD2_k127_2792312_5 protein-L-isoaspartate K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000001324 218.0
DYD2_k127_2792312_6 protein conserved in bacteria K09991 - - 0.0000000000000000000000000000008181 125.0
DYD2_k127_2792312_8 AAA domain - - - 0.00001479 50.0
DYD2_k127_2792312_9 transferase activity, transferring glycosyl groups - - - 0.00002083 47.0
DYD2_k127_286964_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001641 426.0
DYD2_k127_286964_1 cheY-homologous receiver domain - - - 0.000000000000000000000000000003412 124.0
DYD2_k127_2927157_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 8.74e-322 992.0
DYD2_k127_2927157_1 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002176 603.0
DYD2_k127_2927157_2 Belongs to the N(4) N(6)-methyltransferase family K13581 - 2.1.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005827 432.0
DYD2_k127_2927157_3 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007746 408.0
DYD2_k127_2927157_4 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001673 360.0
DYD2_k127_2927157_5 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003206 291.0
DYD2_k127_2927157_6 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.000000000000000000000000000000000000000000000000009284 182.0
DYD2_k127_2927157_7 Ribbon-helix-helix protein, copG family - - - 0.000000000000000000000000000000000000000000000002272 175.0
DYD2_k127_2927157_8 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000000000000000000000001005 173.0
DYD2_k127_2927157_9 - - - - 0.00000004294 59.0
DYD2_k127_296255_0 Pyridoxal-dependent decarboxylase conserved domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007636 307.0
DYD2_k127_296255_1 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins - - - 0.00000000000000000000000000000000000000000000000000000000000001681 220.0
DYD2_k127_296255_2 - - - - 0.00000000000000000001195 98.0
DYD2_k127_296255_3 COG1961 Site-specific recombinases, DNA invertase Pin homologs - - - 0.00000000005293 64.0
DYD2_k127_2997251_0 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 - 2.1.1.13 0.0 1328.0
DYD2_k127_2997251_1 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 0.0 1040.0
DYD2_k127_2997251_10 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141 460.0
DYD2_k127_2997251_11 beta-N-acetylhexosaminidase K01207 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 415.0
DYD2_k127_2997251_12 ArsR family transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001826 407.0
DYD2_k127_2997251_13 Acetylornithine deacetylase Succinyl-diaminopimelate - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 405.0
DYD2_k127_2997251_14 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 386.0
DYD2_k127_2997251_15 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000257 354.0
DYD2_k127_2997251_16 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006318 351.0
DYD2_k127_2997251_17 Protein of unknown function (DUF1624) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002147 358.0
DYD2_k127_2997251_18 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001623 292.0
DYD2_k127_2997251_19 protein, possibly involved in aromatic compounds catabolism - - - 0.000000000000000000000000000000000000000000000000000000000000009009 222.0
DYD2_k127_2997251_2 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 1.762e-311 959.0
DYD2_k127_2997251_20 Sporulation related domain - - - 0.0000000000000000000000000000000000000000000000000000000002542 211.0
DYD2_k127_2997251_21 Alkyl hydroperoxide reductase K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000006181 205.0
DYD2_k127_2997251_22 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.0000000000000000000000000000000000000000000000003141 178.0
DYD2_k127_2997251_23 Arginyl-tRNA synthetase K01887 - 6.1.1.19 0.000000000000000000000000000000000000000009012 155.0
DYD2_k127_2997251_24 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.000000000000000000000000000004446 122.0
DYD2_k127_2997251_27 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000000000001971 89.0
DYD2_k127_2997251_28 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.000000000001005 72.0
DYD2_k127_2997251_29 Male sterility protein - - - 0.00000001718 57.0
DYD2_k127_2997251_3 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008987 563.0
DYD2_k127_2997251_31 - - - - 0.000000655 53.0
DYD2_k127_2997251_32 Sporulation related domain - - - 0.000006563 57.0
DYD2_k127_2997251_4 AFG1 family ATPase K06916 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 525.0
DYD2_k127_2997251_5 Na -driven multidrug efflux pump K03327 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004382 499.0
DYD2_k127_2997251_6 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 484.0
DYD2_k127_2997251_7 Methionine synthase I (cobalamin-dependent), methyltransferase domain K00548 - 2.1.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000365 481.0
DYD2_k127_2997251_8 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007286 464.0
DYD2_k127_2997251_9 In Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002046 456.0
DYD2_k127_3021038_0 GAF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005164 597.0
DYD2_k127_302293_0 glutamate--cysteine ligase K01919 - 6.3.2.2 5.435e-246 764.0
DYD2_k127_302293_1 Sodium:sulfate symporter transmembrane region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002937 531.0
DYD2_k127_302293_2 Serine aminopeptidase, S33 K01259 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 3.4.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002481 312.0
DYD2_k127_302293_3 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008246 284.0
DYD2_k127_302293_4 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.000000000000000000000000000000000000000000000000000408 189.0
DYD2_k127_302293_5 - - - - 0.00000000000000000000000000002989 131.0
DYD2_k127_3037895_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1474.0
DYD2_k127_3037895_1 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 0.0 1452.0
DYD2_k127_3037895_10 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon) K00992 - 2.7.7.99 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 371.0
DYD2_k127_3037895_11 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002556 358.0
DYD2_k127_3037895_12 Belongs to the UPF0301 (AlgH) family K07735 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002504 327.0
DYD2_k127_3037895_13 Angiotensin-converting enzyme K01283 - 3.4.15.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002741 299.0
DYD2_k127_3037895_14 Alkyl hydroperoxide reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005948 266.0
DYD2_k127_3037895_15 ZIP Zinc transporter K07238 - - 0.000000000000000000000000000000000000000000000000000007733 199.0
DYD2_k127_3037895_16 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000000000000000000000000007198 184.0
DYD2_k127_3037895_17 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925,K07102 - 2.7.1.221 0.00000000000000000000000000001273 125.0
DYD2_k127_3037895_18 Adenylate cyclase - - - 0.00000072 59.0
DYD2_k127_3037895_19 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.000001485 52.0
DYD2_k127_3037895_2 helicase K16899 - 3.6.4.12 0.0 1096.0
DYD2_k127_3037895_3 Belongs to the helicase family. UvrD subfamily K16898 - 3.6.4.12 0.0 1077.0
DYD2_k127_3037895_4 Histidine kinase - - - 3.207e-285 895.0
DYD2_k127_3037895_5 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 3.502e-275 854.0
DYD2_k127_3037895_6 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 4.442e-256 824.0
DYD2_k127_3037895_7 Phosphotransferase K07102 - 2.7.1.221 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002516 514.0
DYD2_k127_3037895_8 Aspartyl/Asparaginyl beta-hydroxylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002342 526.0
DYD2_k127_3037895_9 Domain of unknown function (DUF4915) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004552 406.0
DYD2_k127_306580_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 9.742e-241 749.0
DYD2_k127_306580_1 Methylmalonate-semialdehyde dehydrogenase K00140 - 1.2.1.18,1.2.1.27 8.213e-203 633.0
DYD2_k127_306580_2 FAD linked - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003779 544.0
DYD2_k127_306580_3 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007111 339.0
DYD2_k127_306580_4 ubiE/COQ5 methyltransferase family K15471 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 299.0
DYD2_k127_306580_5 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000676 218.0
DYD2_k127_306580_6 glyoxalase III activity - - - 0.000000000000000000000000000000000000000000000000006658 186.0
DYD2_k127_306580_7 Binds to the 23S rRNA K02876 - - 0.000000000000000000000000000000000001277 140.0
DYD2_k127_306580_8 - - - - 0.0000000000000000000001385 103.0
DYD2_k127_3071793_0 GTP-binding protein TypA K06207 - - 9.138e-225 701.0
DYD2_k127_3071793_1 Glutathione-dependent formaldehyde-activating - - - 0.00000000000000000000000000000000000000000000000000000000000000001039 227.0
DYD2_k127_3075479_0 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 2.75e-200 632.0
DYD2_k127_3075479_1 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.00000000000003338 76.0
DYD2_k127_3180346_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 3.042e-209 651.0
DYD2_k127_3180346_1 Belongs to the methyltransferase superfamily K06969 - 2.1.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006069 473.0
DYD2_k127_3180346_10 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000007151 177.0
DYD2_k127_3180346_11 Protein of unknown function (DUF983) - - - 0.00000000000000000000000000000000000000001218 158.0
DYD2_k127_3180346_12 COG1961 Site-specific recombinases, DNA invertase Pin homologs - - - 0.0000000001056 71.0
DYD2_k127_3180346_13 Belongs to the 'phage' integrase family - - - 0.000000000301 62.0
DYD2_k127_3180346_2 Heme copper-type cytochrome quinol oxidase, subunit 3 K02276 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001885 446.0
DYD2_k127_3180346_3 PFAM peptidase M16 domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 430.0
DYD2_k127_3180346_4 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001679 423.0
DYD2_k127_3180346_5 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002324 250.0
DYD2_k127_3180346_6 Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I K02258 - - 0.0000000000000000000000000000000000000000000000000000000000000002152 226.0
DYD2_k127_3180346_7 peptidyl-prolyl cis-trans isomerase K03767 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000003594 205.0
DYD2_k127_3180346_8 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.0000000000000000000000000000000000000000000000000000008162 197.0
DYD2_k127_3180346_9 SURF1-like protein K14998 - - 0.00000000000000000000000000000000000000000000000000001466 200.0
DYD2_k127_3203257_0 helicase K17675 - 3.6.4.13 0.0 1229.0
DYD2_k127_3203257_1 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955,K00956 - 2.7.1.25,2.7.7.4 7.933e-296 935.0
DYD2_k127_3203257_2 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002923 503.0
DYD2_k127_3203257_3 sulfate adenylyltransferase K00957 - 2.7.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009645 494.0
DYD2_k127_3203257_4 MltA-interacting protein MipA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001572 287.0
DYD2_k127_3203257_5 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.00000000000000000000000000000000000000000000000000000000000000000002811 233.0
DYD2_k127_3203257_6 COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) K04762 - - 0.00000000000000000000003215 100.0
DYD2_k127_3203257_7 EF hand - - - 0.0000001529 59.0
DYD2_k127_3215619_0 Flp pilus assembly protein, ATPase CpaE K02282 - - 1.775e-237 741.0
DYD2_k127_3215619_1 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 5.92e-226 706.0
DYD2_k127_3215619_10 Methionine biosynthesis protein MetW - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 327.0
DYD2_k127_3215619_11 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006121 250.0
DYD2_k127_3215619_12 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000000000001126 242.0
DYD2_k127_3215619_13 Pilus assembly protein CpaD K02281 - - 0.00000000000000000000000000000000000000000000000000000000000000001696 231.0
DYD2_k127_3215619_14 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.00000000000000000000000000000000000000000000000000000001301 202.0
DYD2_k127_3215619_15 peptidase K02278 - 3.4.23.43 0.000000000000000000000000000000000000000001623 162.0
DYD2_k127_3215619_2 Glycine dehydrogenase (aminomethyl-transferring) K00283 - 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005466 592.0
DYD2_k127_3215619_3 Belongs to the GSP D family K02280 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002705 521.0
DYD2_k127_3215619_4 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007107 497.0
DYD2_k127_3215619_5 Glycine cleavage system T protein K00605 - 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009999 494.0
DYD2_k127_3215619_6 rod shape-determining protein MreB K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005408 476.0
DYD2_k127_3215619_7 Pilus assembly protein CpaB K02279 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001146 469.0
DYD2_k127_3215619_8 pilus assembly protein TadB K12510 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005686 431.0
DYD2_k127_3215619_9 Oxidoreductase K19746 - 1.4.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008904 412.0
DYD2_k127_3255628_0 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 - 1.11.1.21 0.0 1035.0
DYD2_k127_3255628_1 Acetyl-coenzyme A transporter 1 K08218 - - 2.035e-280 871.0
DYD2_k127_3255628_10 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002949 317.0
DYD2_k127_3255628_11 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005088 298.0
DYD2_k127_3255628_12 Methyltransferase K08316 - 2.1.1.171 0.00000000000000000000000000000000000000000000000000000000004975 212.0
DYD2_k127_3255628_13 Hemerythrin HHE cation binding domain - - - 0.00000000000000000000000000000000000000000000000000000001547 202.0
DYD2_k127_3255628_14 response regulator - - - 0.000000000000000000000000000000001284 136.0
DYD2_k127_3255628_15 Glycine zipper 2TM domain - - - 0.00000000000000000000000000000007501 126.0
DYD2_k127_3255628_16 Protein of unknown function (DUF2794) - - - 0.000000000000000000000000001357 117.0
DYD2_k127_3255628_17 Pfam:DUF1049 K08992 - - 0.0000000000000000000004913 100.0
DYD2_k127_3255628_18 - - - - 0.00003161 49.0
DYD2_k127_3255628_2 beta-lactamase K01467 - 3.5.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000178 563.0
DYD2_k127_3255628_3 Ring hydroxylating alpha subunit (catalytic domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 503.0
DYD2_k127_3255628_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004209 466.0
DYD2_k127_3255628_5 Transcriptional regulator K04761 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007553 466.0
DYD2_k127_3255628_6 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002784 457.0
DYD2_k127_3255628_7 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002518 425.0
DYD2_k127_3255628_8 serine acetyltransferase K00640 - 2.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005871 339.0
DYD2_k127_3255628_9 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000997 332.0
DYD2_k127_3258973_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1828.0
DYD2_k127_3258973_1 ATP-dependent DNA helicase RecG K03655 - 3.6.4.12 0.0 1026.0
DYD2_k127_3258973_10 PFAM Excinuclease ABC, C subunit domain protein K07461 - - 0.00000000000000000000000000000000000000000007492 161.0
DYD2_k127_3258973_11 Flavinator of succinate dehydrogenase K09159 - - 0.00000000000000000000000000000008746 127.0
DYD2_k127_3258973_12 LysR substrate binding domain - - - 0.000000000000000000000000000001645 132.0
DYD2_k127_3258973_13 PspC domain protein - - - 0.0000000000000002013 83.0
DYD2_k127_3258973_2 methyl-accepting chemotaxis protein K03406 - - 4.43e-224 704.0
DYD2_k127_3258973_3 Protein of unknown function (DUF1343) - - - 7.72e-217 677.0
DYD2_k127_3258973_4 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002097 592.0
DYD2_k127_3258973_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009226 300.0
DYD2_k127_3258973_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000002746 236.0
DYD2_k127_3258973_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000001415 230.0
DYD2_k127_3258973_8 stress protein (general stress protein 26) - - - 0.000000000000000000000000000000000000000000000000000000000168 209.0
DYD2_k127_3258973_9 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000004796 191.0
DYD2_k127_3303265_0 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 - 1.17.4.1 0.0 1148.0
DYD2_k127_3303265_1 Glucoamylase - - - 8.571e-320 986.0
DYD2_k127_3303265_10 Domain of unknown function (DUF305) - - - 0.0000000000000000000000000000156 124.0
DYD2_k127_3303265_11 - - - - 0.000000000000000000000002744 111.0
DYD2_k127_3303265_12 Domain of unknown function (DUF305) - - - 0.00000000000000000007047 94.0
DYD2_k127_3303265_2 Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor K00697 - 2.4.1.15,2.4.1.347 5.935e-225 709.0
DYD2_k127_3303265_3 Peptidase, M28 - - - 2.561e-211 670.0
DYD2_k127_3303265_4 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006961 269.0
DYD2_k127_3303265_5 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.000000000000000000000000000000000000000000000000000000000000000000001804 244.0
DYD2_k127_3303265_6 Antirepressor regulating drug resistance - - - 0.0000000000000000000000000000000000000000000000000000000000000000005833 247.0
DYD2_k127_3303265_7 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00526 - 1.17.4.1 0.000000000000000000000000000000000000000000000000000000000000001631 222.0
DYD2_k127_3303265_8 Penicillinase repressor - - - 0.000000000000000000000000000000000000001921 152.0
DYD2_k127_3303265_9 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.000000000000000000000000000000000025 136.0
DYD2_k127_3372821_0 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 3.524e-199 626.0
DYD2_k127_3372821_1 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005699 530.0
DYD2_k127_3372821_10 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000002214 197.0
DYD2_k127_3372821_11 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.00000000000000000000000004503 111.0
DYD2_k127_3372821_12 Bacterial extracellular solute-binding proteins, family 5 Middle K15580 - - 0.0000000000000000000005846 102.0
DYD2_k127_3372821_13 Protein conserved in bacteria - - - 0.000000000000003307 83.0
DYD2_k127_3372821_14 acetyltransferase - - - 0.00000000000002491 80.0
DYD2_k127_3372821_15 Protein of unknown function (DUF1192) - - - 0.00000000005378 67.0
DYD2_k127_3372821_2 Belongs to the DEAD box helicase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003268 529.0
DYD2_k127_3372821_3 NADPH quinone - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000946 459.0
DYD2_k127_3372821_4 Belongs to the FPP GGPP synthase family K00795 - 2.5.1.1,2.5.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009283 424.0
DYD2_k127_3372821_5 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002124 379.0
DYD2_k127_3372821_6 protein conserved in bacteria K09987 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003287 361.0
DYD2_k127_3372821_7 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000026 253.0
DYD2_k127_3372821_8 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides - - - 0.0000000000000000000000000000000000000000000000000000000000000000007333 232.0
DYD2_k127_3372821_9 Domain of unknown function (DUF305) - - - 0.000000000000000000000000000000000000000000000000000000000001841 212.0
DYD2_k127_3390511_0 - - - - 0.0000000000002927 74.0
DYD2_k127_3390511_1 - - - - 0.000000000001819 74.0
DYD2_k127_3390511_3 DNA helicase - - - 0.0005371 47.0
DYD2_k127_3396525_0 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004198 370.0
DYD2_k127_3396525_1 FtsJ-like methyltransferase K06442 - 2.1.1.226,2.1.1.227 0.0000000000000000000000000000000000000000015 160.0
DYD2_k127_3396525_2 exodeoxyribonuclease VII activity K03602 - 3.1.11.6 0.000000000000000000000000000001235 123.0
DYD2_k127_3402110_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 3.795e-233 725.0
DYD2_k127_3402110_1 Acetyltransferase (GNAT) domain K03823 - 2.3.1.183 0.0000000000000000000000000000000000000000000000000000000000000000006908 233.0
DYD2_k127_3402110_2 stress protein (general stress protein 26) - - - 0.00000000000000000000000000000000000000001023 155.0
DYD2_k127_3402110_3 Cold-shock protein K03704 - - 0.00000000000000000000000000001806 122.0
DYD2_k127_3402110_4 - - - - 0.0000000000123 68.0
DYD2_k127_3402110_5 - K09924 - - 0.000001727 58.0
DYD2_k127_3402110_6 - - - - 0.00001567 53.0
DYD2_k127_3402110_7 - - - - 0.00007475 49.0
DYD2_k127_3472227_0 Methyltransferase FkbM domain - - - 0.000000000000000000000000000000000000000000000000000146 198.0
DYD2_k127_3472227_1 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K15598 - - 0.0000000000000000000000000000000000000000003057 160.0
DYD2_k127_3472227_2 Sulfotransferase family K01015 - 2.8.2.2 0.0003623 51.0
DYD2_k127_3484284_0 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 3.941e-199 629.0
DYD2_k127_3484284_1 Phosphate starvation-inducible protein PhoH K06217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002151 509.0
DYD2_k127_3484284_10 Belongs to the Fur family K03711 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001944 243.0
DYD2_k127_3484284_11 protein homotetramerization - GO:0003674,GO:0005215,GO:0005216,GO:0005261,GO:0005267,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015267,GO:0015318,GO:0015672,GO:0016043,GO:0022607,GO:0022803,GO:0022838,GO:0022840,GO:0022841,GO:0022842,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0043933,GO:0044085,GO:0046873,GO:0051179,GO:0051234,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055085,GO:0065003,GO:0071804,GO:0071805,GO:0071840,GO:0098655,GO:0098660,GO:0098662 - 0.00000000000000000000000000000000000000000000000000000000000000000000003346 248.0
DYD2_k127_3484284_12 dioxygenase of extradiol dioxygenase family K06991 - - 0.00000000000000000000000000000000000000000000000000000000000000004774 228.0
DYD2_k127_3484284_13 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000006708 215.0
DYD2_k127_3484284_14 peptidase M22 - - - 0.0000000000000000000000000000000000000000000000000000000001957 209.0
DYD2_k127_3484284_15 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.000000000000000000000000000000000000000000000000000000002982 203.0
DYD2_k127_3484284_16 Acyltransferase K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000004352 198.0
DYD2_k127_3484284_17 Acetyltransferase K03789 - 2.3.1.128 0.0000000000000000000000000000000000000000000002172 173.0
DYD2_k127_3484284_18 metal-binding integral membrane protein - - - 0.000000000000000000000000000000000000000000001885 174.0
DYD2_k127_3484284_19 Cytochrome C' - - - 0.00000000000000000000000000001539 126.0
DYD2_k127_3484284_2 Belongs to the 3-hydroxyisobutyrate dehydrogenase family K00020 - 1.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009909 422.0
DYD2_k127_3484284_20 Domain of unknown function (DUF202) K00389 - - 0.0000000000000000000000000000477 123.0
DYD2_k127_3484284_3 COG1253 Hemolysins and related proteins containing CBS domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 406.0
DYD2_k127_3484284_4 Protein of unknown function (DUF1326) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003136 361.0
DYD2_k127_3484284_5 Protein of unknown function (DUF541) K09807 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003764 329.0
DYD2_k127_3484284_6 COG0694 Thioredoxin-like proteins and domains - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001714 300.0
DYD2_k127_3484284_7 PFAM integrase family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006148 263.0
DYD2_k127_3484284_8 Prokaryotic cytochrome b561 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001117 250.0
DYD2_k127_3484284_9 Aspartyl Asparaginyl beta-hydroxylase K12979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000009341 251.0
DYD2_k127_3484425_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003171 350.0
DYD2_k127_3484425_1 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.00000000000000000000000000004626 125.0
DYD2_k127_3484425_2 SMART regulatory protein LuxR - - - 0.00000000000000000000002269 115.0
DYD2_k127_3520071_0 PFAM malic K00027,K00029 - 1.1.1.38,1.1.1.40 4.505e-213 676.0
DYD2_k127_3520071_1 - - - - 0.00000000000000000000002415 105.0
DYD2_k127_3567321_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1461.0
DYD2_k127_3567321_1 Belongs to the GARS family K01945 - 6.3.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002134 612.0
DYD2_k127_3567321_10 Peptidase M15 - - - 0.000000000000000000000000000000000000000000000000000000000000002113 233.0
DYD2_k127_3567321_11 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.00000000000000000000000000000000000000000000001641 172.0
DYD2_k127_3567321_12 NADH ubiquinone oxidoreductase 41 kD complex I subunit - - - 0.000000000000000000000000000000000001812 146.0
DYD2_k127_3567321_13 Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn) - - - 0.0000000000000000000000000001748 130.0
DYD2_k127_3567321_14 Uncharacterized protein conserved in bacteria (DUF2093) - - - 0.0000000000000000000003886 96.0
DYD2_k127_3567321_2 COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases K00528 - 1.18.1.2,1.19.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003146 594.0
DYD2_k127_3567321_3 COG1253 Hemolysins and related proteins containing CBS domains K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003989 585.0
DYD2_k127_3567321_4 Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate K00451 - 1.13.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007228 580.0
DYD2_k127_3567321_5 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005394 555.0
DYD2_k127_3567321_6 Aldolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 445.0
DYD2_k127_3567321_7 PepSY-associated TM region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 348.0
DYD2_k127_3567321_8 maleylacetoacetate isomerase K01800,K01801 - 5.2.1.2,5.2.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000537 280.0
DYD2_k127_3567321_9 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.000000000000000000000000000000000000000000000000000000000000000007236 227.0
DYD2_k127_3578678_0 Belongs to the heme-copper respiratory oxidase family K15408 - 1.9.3.1 0.0 1302.0
DYD2_k127_3578678_1 NADH flavin oxidoreductase NADH oxidase K09461 - 1.14.13.40 0.0 1164.0
DYD2_k127_3578678_10 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) K02351 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002151 262.0
DYD2_k127_3578678_11 membrane - - - 0.000000000000000000000000000000000000000000001501 171.0
DYD2_k127_3578678_12 Protein of unknown function (DUF1622) - - - 0.000000000000000000000000001299 117.0
DYD2_k127_3578678_13 PFAM cytochrome c, class I - - - 0.0000000000001801 83.0
DYD2_k127_3578678_14 - - - - 0.00000000006658 69.0
DYD2_k127_3578678_2 Glucose / Sorbosone dehydrogenase - - - 1.177e-205 648.0
DYD2_k127_3578678_3 cytochrome c oxidase subunit II K02275 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006497 454.0
DYD2_k127_3578678_4 TIGRFAM chromate transporter, chromate ion transporter (CHR) family K07240 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002518 451.0
DYD2_k127_3578678_5 Chromate resistance exported protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 370.0
DYD2_k127_3578678_6 Prokaryotic cytochrome b561 K12262 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002076 327.0
DYD2_k127_3578678_7 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001535 329.0
DYD2_k127_3578678_8 PFAM aldo keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001863 327.0
DYD2_k127_3578678_9 Ornithine cyclodeaminase/mu-crystallin family K01750,K19244,K19743 - 1.4.1.1,1.5.1.1,4.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002651 314.0
DYD2_k127_3730920_0 MaoC like domain K02618 - 1.2.1.91,3.3.2.12 7.6e-322 990.0
DYD2_k127_3730920_1 CBS domain - - - 0.000000000000000000000000000000000004191 142.0
DYD2_k127_3730920_2 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.00000000000004069 74.0
DYD2_k127_3732212_0 glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006496 474.0
DYD2_k127_3732212_1 sugar transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 445.0
DYD2_k127_3732212_10 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001817 287.0
DYD2_k127_3732212_11 Belongs to the glycosyltransferase 26 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002331 262.0
DYD2_k127_3732212_12 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001798 269.0
DYD2_k127_3732212_13 involved in chromosome partitioning - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004162 254.0
DYD2_k127_3732212_14 Glycosyl Transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002074 250.0
DYD2_k127_3732212_15 Protein of unknown function (DUF3485) - - - 0.000000000000000000000000000000000000000000000000000000000000000002224 238.0
DYD2_k127_3732212_16 Cell Wall - - - 0.000000000000000000000000000000000000000000000000000000000000001379 232.0
DYD2_k127_3732212_17 SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains. - - - 0.000000000000000000000000000000000000000000000000000000000000001871 222.0
DYD2_k127_3732212_18 glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000001405 231.0
DYD2_k127_3732212_19 Tetratricopeptide repeats - - - 0.00000000000000000000000000000000000000000000000000000000000003569 232.0
DYD2_k127_3732212_2 Chain length determinant protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002519 425.0
DYD2_k127_3732212_20 Male sterility protein - - - 0.0000000000000000000000000000000000000000000000000000000000005409 231.0
DYD2_k127_3732212_21 Polysaccharide biosynthesis/export protein K01991 - - 0.000000000000000000000000000000000000000000000000000000000002154 215.0
DYD2_k127_3732212_22 TIGRFAM peptidyl-prolyl cis-trans isomerase, EpsD family - - - 0.0000000000000000000000000000000000000000000000000000000008754 211.0
DYD2_k127_3732212_23 COG3306 Glycosyltransferase involved in LPS biosynthesis K07270 - - 0.000000000000000000000000000000000000000000000000000000003624 207.0
DYD2_k127_3732212_24 Methyltransferase FkbM domain - - - 0.00000000000000000000000000000000000000000000000000004303 196.0
DYD2_k127_3732212_25 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000000000000000000000000000000001304 190.0
DYD2_k127_3732212_26 - - - - 0.0000000000000000000000000008273 130.0
DYD2_k127_3732212_27 gag-polyprotein putative aspartyl protease K06985 - - 0.00000000000000000000000001888 114.0
DYD2_k127_3732212_28 - - - - 0.00000000000000000000000006402 109.0
DYD2_k127_3732212_29 - - - - 0.000001621 58.0
DYD2_k127_3732212_3 Glycosyl transferase family group 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002063 358.0
DYD2_k127_3732212_4 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001346 332.0
DYD2_k127_3732212_5 transmembrane protein EpsH - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003492 328.0
DYD2_k127_3732212_6 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005155 310.0
DYD2_k127_3732212_7 Mannose-1-phosphate guanylyltransferase K00971 - 2.7.7.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003814 300.0
DYD2_k127_3732212_8 O-antigen ligase like membrane protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003176 299.0
DYD2_k127_3732212_9 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001267 284.0
DYD2_k127_3737472_0 Binding-protein-dependent transport system inner membrane component K11070 - - 0.00000000000000000000000000000000000000000000000000000000001901 208.0
DYD2_k127_3737472_1 Adenylate cyclase - - - 0.000000000000000000000000000000000000000005312 172.0
DYD2_k127_3737472_2 COG2771 DNA-binding HTH domain-containing proteins - - - 0.0000000008378 71.0
DYD2_k127_375213_0 PFAM Cytochrome c assembly protein K02198 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 486.0
DYD2_k127_375213_1 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.00000000000000000000000000000000000009731 146.0
DYD2_k127_3763776_0 Belongs to the PEP-utilizing enzyme family K08484 - 2.7.3.9 0.0 1163.0
DYD2_k127_3763776_1 Belongs to the aspartokinase family K00928 - 2.7.2.4 1.147e-209 657.0
DYD2_k127_3763776_10 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000081 402.0
DYD2_k127_3763776_11 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000636 389.0
DYD2_k127_3763776_12 Dehydrogenase K00329,K00356 - 1.6.5.3,1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001712 363.0
DYD2_k127_3763776_13 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008852 296.0
DYD2_k127_3763776_14 COG0122 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase K01247 - 3.2.2.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008939 287.0
DYD2_k127_3763776_15 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000002369 272.0
DYD2_k127_3763776_16 COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007552 246.0
DYD2_k127_3763776_17 Domain of unknown function (DUF4115) - - - 0.000000000000000000000000000000000000000000000000000000000000000000002121 245.0
DYD2_k127_3763776_18 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000001108 239.0
DYD2_k127_3763776_19 SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains. - - - 0.00000000000000000000000000000000000000000000000000000000005375 209.0
DYD2_k127_3763776_2 Pyrrolo-quinoline quinone - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001463 607.0
DYD2_k127_3763776_20 Tetratricopeptide repeat-like domain - - - 0.00000000000000000000000000000000000000000000000000000000393 207.0
DYD2_k127_3763776_21 DoxX K15977 - - 0.000000000000000000000000000000000000000000000000000000005332 201.0
DYD2_k127_3763776_22 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000003468 192.0
DYD2_k127_3763776_23 Methylmalonyl-CoA mutase K01847 - 5.4.99.2 0.0000000000000000000000000000000000000000000000000003511 187.0
DYD2_k127_3763776_24 small integral membrane protein - - - 0.00000000000000000000000000000000000000000000002406 174.0
DYD2_k127_3763776_27 Aspartyl protease - - - 0.000000000000000000000000000006869 134.0
DYD2_k127_3763776_28 response regulator K02282,K07782,K19135 - - 0.00000000000000000000000002959 119.0
DYD2_k127_3763776_29 Transcriptional regulator K07727 - - 0.00000000000000000000000007999 110.0
DYD2_k127_3763776_3 2-nitropropane dioxygenase K02371 - 1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003624 558.0
DYD2_k127_3763776_31 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 - 2.7.1.167,2.7.7.70 0.000000000000000000000001142 104.0
DYD2_k127_3763776_32 - - - - 0.0000000000000000007929 92.0
DYD2_k127_3763776_33 Hemerythrin HHE cation binding domain - - - 0.000000000000001512 82.0
DYD2_k127_3763776_34 - - - - 0.00000006571 61.0
DYD2_k127_3763776_36 - - - - 0.0001603 46.0
DYD2_k127_3763776_37 - - - - 0.0002456 48.0
DYD2_k127_3763776_38 - - - - 0.0004662 49.0
DYD2_k127_3763776_39 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0006375 52.0
DYD2_k127_3763776_4 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001463 539.0
DYD2_k127_3763776_5 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K00850,K21071 - 2.7.1.11,2.7.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006625 526.0
DYD2_k127_3763776_6 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008407 477.0
DYD2_k127_3763776_7 Peptidase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000501 456.0
DYD2_k127_3763776_8 Glutathione S-transferase K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 421.0
DYD2_k127_3763776_9 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002687 406.0
DYD2_k127_3860310_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.0 1029.0
DYD2_k127_3860310_1 Branched-chain amino acid aminotransferase K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000286 529.0
DYD2_k127_3860310_10 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004655 267.0
DYD2_k127_3860310_11 gag-polyprotein putative aspartyl protease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007541 261.0
DYD2_k127_3860310_12 Belongs to the Fur family K09823 - - 0.00000000000000000000000000000000000000000000000000000000000000000000008214 243.0
DYD2_k127_3860310_13 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.000000000000000000000000000000000000000000000000000000000000001919 227.0
DYD2_k127_3860310_14 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000002668 204.0
DYD2_k127_3860310_15 protein affecting Mg2 Co2 transport K06195 - - 0.00000000000000000000000000000000000000000000000000000002947 199.0
DYD2_k127_3860310_16 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) K05770 - - 0.000000000000000000000000000000000000000000005982 169.0
DYD2_k127_3860310_17 Dopa 4,5-dioxygenase family K10253 - - 0.000000000000000000000000000000000000000003071 157.0
DYD2_k127_3860310_18 MerC mercury resistance protein - - - 0.00000000000000000000000000000000000000002847 155.0
DYD2_k127_3860310_19 - - - - 0.00000000000000000000000000000000532 130.0
DYD2_k127_3860310_2 cystathionine beta-lyase K01760 - 4.4.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002113 482.0
DYD2_k127_3860310_20 Membrane fusogenic activity K09806 - - 0.000000000000000000000000000002156 123.0
DYD2_k127_3860310_21 CutA1 divalent ion tolerance protein K03926 - - 0.000000000000000000000000176 121.0
DYD2_k127_3860310_22 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.0000000000000000000001335 96.0
DYD2_k127_3860310_23 Domain of unknown function (DUF378) K09779 - - 0.00000000000000002416 85.0
DYD2_k127_3860310_24 - - - - 0.000000000000003096 82.0
DYD2_k127_3860310_25 Belongs to the UPF0235 family K09131 - - 0.0000000000000615 75.0
DYD2_k127_3860310_26 - - - - 0.00000000009533 64.0
DYD2_k127_3860310_3 Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group K02259 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008359 446.0
DYD2_k127_3860310_4 COG2931 RTX toxins and related Ca2 -binding proteins K01406 - 3.4.24.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002399 434.0
DYD2_k127_3860310_5 Hemolysin K06442 - 2.1.1.226,2.1.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004959 381.0
DYD2_k127_3860310_6 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003923 312.0
DYD2_k127_3860310_7 Involved in DNA repair and RecF pathway recombination K03584 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004673 293.0
DYD2_k127_3860310_8 Putative bacterial sensory transduction regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004617 278.0
DYD2_k127_3860310_9 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005806 283.0
DYD2_k127_391526_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 5.196e-243 760.0
DYD2_k127_391526_1 May be involved in recombinational repair of damaged DNA K03631 - - 1.017e-198 638.0
DYD2_k127_391526_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001946 447.0
DYD2_k127_391526_3 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005716 402.0
DYD2_k127_391526_4 Dienelactone hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001406 265.0
DYD2_k127_391526_5 Preprotein translocase subunit YajC K03210 - - 0.00000000000000000000000000000000006624 136.0
DYD2_k127_391526_6 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 0.0000000000000000000000000000000008345 135.0
DYD2_k127_3922284_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 9.279e-319 982.0
DYD2_k127_3922284_1 aspartate racemase K01779 - 5.1.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000002908 242.0
DYD2_k127_3948347_0 TonB dependent receptor - - - 1.732e-239 763.0
DYD2_k127_3948347_1 Amidohydrolase family - - - 0.0008796 48.0
DYD2_k127_3951705_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1358.0
DYD2_k127_3951705_1 ATP-dependent DNA ligase K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 2.466e-262 816.0
DYD2_k127_3951705_10 protein conserved in bacteria K09919 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 486.0
DYD2_k127_3951705_11 phosphate transport system permease K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005451 472.0
DYD2_k127_3951705_12 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001661 471.0
DYD2_k127_3951705_13 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000205 471.0
DYD2_k127_3951705_14 PBP superfamily domain K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004107 462.0
DYD2_k127_3951705_15 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006389 463.0
DYD2_k127_3951705_16 phosphate-selective porin K07221 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002278 463.0
DYD2_k127_3951705_17 COG0330 Membrane protease subunits, stomatin prohibitin homologs - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000254 422.0
DYD2_k127_3951705_18 ABC-type (Unclassified) transport system, ATPase component K06861 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 425.0
DYD2_k127_3951705_19 MTH538 TIR-like domain (DUF1863) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001513 434.0
DYD2_k127_3951705_2 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 2.873e-212 663.0
DYD2_k127_3951705_20 TonB-dependent Receptor Plug Domain K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 410.0
DYD2_k127_3951705_21 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07657 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007389 377.0
DYD2_k127_3951705_22 endonuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009411 369.0
DYD2_k127_3951705_23 Cold shock K03704 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009814 366.0
DYD2_k127_3951705_24 Asparaginase K13051 - 3.4.19.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001474 360.0
DYD2_k127_3951705_25 Plays a role in the regulation of phosphate uptake K02039 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009892,GO:0010563,GO:0010966,GO:0019220,GO:0019222,GO:0031323,GO:0031324,GO:0032879,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0042802,GO:0042803,GO:0043269,GO:0043271,GO:0044070,GO:0044424,GO:0044464,GO:0045936,GO:0046983,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051049,GO:0051051,GO:0051174,GO:0065007,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002876 354.0
DYD2_k127_3951705_26 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 349.0
DYD2_k127_3951705_27 3'-5' exonuclease K03684 - 3.1.13.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002049 341.0
DYD2_k127_3951705_28 Belongs to the short-chain dehydrogenases reductases (SDR) family K05886 - 1.1.1.276 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003185 335.0
DYD2_k127_3951705_29 Histidine kinase K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000473 328.0
DYD2_k127_3951705_3 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 1.407e-203 637.0
DYD2_k127_3951705_30 UMP catabolic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002036 262.0
DYD2_k127_3951705_31 endoribonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001469 244.0
DYD2_k127_3951705_32 EamA-like transporter family K15270 - - 0.0000000000000000000000000000000000000000000000000000000000000000000007965 246.0
DYD2_k127_3951705_33 protein conserved in bacteria K09774 - - 0.00000000000000000000000000000000000000000000000000000000000000000007474 241.0
DYD2_k127_3951705_34 Protein conserved in bacteria K11719 - - 0.0000000000000000000000000000000000000000000000000000000000000000002543 235.0
DYD2_k127_3951705_35 Acyl-CoA hydrolase K10806 - - 0.000000000000000000000000000000000000000000000000000000007526 204.0
DYD2_k127_3951705_36 - - - - 0.000000000000000000000000000000000000000000000000005724 201.0
DYD2_k127_3951705_37 Small Multidrug Resistance protein K11741 - - 0.0000000000000000000000000000000000000000000000006831 177.0
DYD2_k127_3951705_38 CBS domain - - - 0.00000000000000000000000000000000000000000000001597 175.0
DYD2_k127_3951705_39 response regulator K11443 - - 0.0000000000000000000000000000000000000000000001453 172.0
DYD2_k127_3951705_4 histidyl-tRNA synthetase K01892 - 6.1.1.21 3.579e-196 618.0
DYD2_k127_3951705_40 Domain of unknown function (DUF4167) - - - 0.00000000000000000000000000000000000000000007067 167.0
DYD2_k127_3951705_41 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000000000000000000000000000007624 158.0
DYD2_k127_3951705_42 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.0000000000000000000000000000008164 131.0
DYD2_k127_3951705_43 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. - - - 0.0000000000000000000000000002596 123.0
DYD2_k127_3951705_44 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.00000000000000000000000001873 110.0
DYD2_k127_3951705_45 - - - - 0.00000000000000000000000126 104.0
DYD2_k127_3951705_46 Protein of unknown function (DUF3572) - - - 0.00000000000000000008195 91.0
DYD2_k127_3951705_48 - - - - 0.00000000000000001485 86.0
DYD2_k127_3951705_49 - - - - 0.000000000000001122 87.0
DYD2_k127_3951705_5 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002549 592.0
DYD2_k127_3951705_6 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001537 577.0
DYD2_k127_3951705_7 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009282 531.0
DYD2_k127_3951705_8 Phosphate ABC transporter substrate-binding protein K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002702 512.0
DYD2_k127_3951705_9 DEAD DEAH box helicase K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002457 510.0
DYD2_k127_402542_0 Bacterial periplasmic substrate-binding proteins K02030 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005463 388.0
DYD2_k127_402542_1 ABC transporter K02029 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004686 308.0
DYD2_k127_402542_2 Polar amino acid ABC transporter, inner membrane K02029 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003052 276.0
DYD2_k127_402542_3 ATPases associated with a variety of cellular activities K02028 - 3.6.3.21 0.00000000000000000000000000000000000003134 149.0
DYD2_k127_402542_4 BFD-like [2Fe-2S] binding domain - - - 0.00000000000000000003076 96.0
DYD2_k127_4043278_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 1866.0
DYD2_k127_4043278_1 Penicillin-binding Protein K05366 - 2.4.1.129,3.4.16.4 0.0 1245.0
DYD2_k127_4043278_10 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002066 304.0
DYD2_k127_4043278_11 Bacterial conjugation TrbI-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004323 297.0
DYD2_k127_4043278_12 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009082 284.0
DYD2_k127_4043278_13 TrbL/VirB6 plasmid conjugal transfer protein K03201 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009801 271.0
DYD2_k127_4043278_14 Conjugal transfer protein K03204 - - 0.000000000000000000000000000000000000000000000000000000000003839 220.0
DYD2_k127_4043278_15 Protein-disulfide isomerase - - - 0.0000000000000000000000000000000000000000000000000002418 193.0
DYD2_k127_4043278_16 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) - - - 0.000000000000000000000000000000000000000000000000001559 189.0
DYD2_k127_4043278_17 Type IV secretory pathway K03198 - - 0.00000000000000000000000000000000000000003412 157.0
DYD2_k127_4043278_18 RadC-like JAB domain K03630 - - 0.00000000000000000000000000000000003218 138.0
DYD2_k127_4043278_19 Type IV secretory pathway, VirB2 K03197 - - 0.000000000000000000000000000000002584 132.0
DYD2_k127_4043278_2 type IV secretion system K03199 - - 0.0 1098.0
DYD2_k127_4043278_20 Domain of unknown function (DUF1996) - - - 0.000000000000000000000000000001072 123.0
DYD2_k127_4043278_23 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.000334 50.0
DYD2_k127_4043278_3 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 1.459e-311 975.0
DYD2_k127_4043278_4 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 1.716e-199 627.0
DYD2_k127_4043278_5 Peptidase M48 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004735 595.0
DYD2_k127_4043278_6 exopolyphosphatase K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001782 506.0
DYD2_k127_4043278_7 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006957 464.0
DYD2_k127_4043278_8 IV secretion system protein K03196 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002618 413.0
DYD2_k127_4043278_9 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002282 355.0
DYD2_k127_4062512_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 3.465e-315 973.0
DYD2_k127_4062512_1 ribosomal protein L11 K02687 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 387.0
DYD2_k127_4062512_2 COG0491 Zn-dependent hydrolases, including glyoxylases K17837 - 3.5.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000005883 252.0
DYD2_k127_4085707_0 Sulfotransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003179 316.0
DYD2_k127_4085707_1 Sulfotransferase family K01014 - 2.8.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007589 306.0
DYD2_k127_4085707_2 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002877 267.0
DYD2_k127_4085707_3 Aspartyl/Asparaginyl beta-hydroxylase - - - 0.000000000000000000000000000000000001747 146.0
DYD2_k127_4162163_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1358.0
DYD2_k127_4162163_1 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1250.0
DYD2_k127_4162163_10 Heparinase - - - 1.8e-224 721.0
DYD2_k127_4162163_11 Polysaccharide biosynthesis protein - - - 6.453e-219 693.0
DYD2_k127_4162163_12 oligosaccharyl transferase activity - - - 9.152e-212 674.0
DYD2_k127_4162163_13 Acts as a magnesium transporter K06213 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 611.0
DYD2_k127_4162163_14 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007995 553.0
DYD2_k127_4162163_15 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005448 543.0
DYD2_k127_4162163_16 Dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001399 546.0
DYD2_k127_4162163_17 synthase K00574 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 518.0
DYD2_k127_4162163_18 Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 family K03185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008963 494.0
DYD2_k127_4162163_19 ABC-type multidrug transport system, ATPase component K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006894 470.0
DYD2_k127_4162163_2 Belongs to the AAA ATPase family K13525 - - 0.0 1247.0
DYD2_k127_4162163_20 exodeoxyribonuclease III K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007506 458.0
DYD2_k127_4162163_21 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002148 457.0
DYD2_k127_4162163_22 Glycosyl transferase family 2 K20534 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 460.0
DYD2_k127_4162163_23 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 - 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004153 459.0
DYD2_k127_4162163_24 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000437 457.0
DYD2_k127_4162163_25 beta-lactamase K17836 - 3.5.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008434 436.0
DYD2_k127_4162163_26 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006053 433.0
DYD2_k127_4162163_27 COG1215 Glycosyltransferases, probably involved in cell wall biogenesis K11740 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 392.0
DYD2_k127_4162163_28 Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate K01497 - 3.5.4.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001616 388.0
DYD2_k127_4162163_29 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002128 374.0
DYD2_k127_4162163_3 Domain of unknown function DUF87 K06915 - - 3.431e-305 941.0
DYD2_k127_4162163_30 Thioredoxin K05838 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001641 357.0
DYD2_k127_4162163_31 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005585 338.0
DYD2_k127_4162163_32 Putative transmembrane protein (Alph_Pro_TM) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009929 346.0
DYD2_k127_4162163_33 KR domain K07124 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008856 276.0
DYD2_k127_4162163_34 to the N-terminal domain of Lon protease K07157 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001304 262.0
DYD2_k127_4162163_35 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000005467 261.0
DYD2_k127_4162163_36 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001345 253.0
DYD2_k127_4162163_37 DNA polymerase III K02340 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000002056 257.0
DYD2_k127_4162163_38 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003181 245.0
DYD2_k127_4162163_39 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001016 246.0
DYD2_k127_4162163_4 DNA segregation ATPase FtsK SpoIIIE K03466 - - 1.501e-301 943.0
DYD2_k127_4162163_40 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000004375 238.0
DYD2_k127_4162163_41 Peroxiredoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000006381 226.0
DYD2_k127_4162163_42 Domain of unknown function (DUF3576) - - - 0.00000000000000000000000000000000000000000000000000000000001103 211.0
DYD2_k127_4162163_43 - - - - 0.00000000000000000000000000000000000000000000000000000000006441 214.0
DYD2_k127_4162163_44 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000008324 206.0
DYD2_k127_4162163_45 COG1215 Glycosyltransferases, probably involved in cell wall biogenesis K11740 - - 0.000000000000000000000000000000000000000000000000000000002867 206.0
DYD2_k127_4162163_46 Lipopolysaccharide-assembly K03643 - - 0.00000000000000000000000000000000000000000000000000000007968 202.0
DYD2_k127_4162163_47 Belongs to the ParB family K03497 - - 0.0000000000000000000000000000000000000000000000000000368 191.0
DYD2_k127_4162163_48 - - - - 0.0000000000000000000000000000000000000000000001204 184.0
DYD2_k127_4162163_49 Uroporphyrinogen-III synthase K01719 - 4.2.1.75 0.0000000000000000000000000000000000000000005819 165.0
DYD2_k127_4162163_5 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 1.382e-281 873.0
DYD2_k127_4162163_50 Protein of unknown function (DUF1810) - - - 0.00000000000000000000000000000000000000002642 157.0
DYD2_k127_4162163_51 protein conserved in bacteria - - - 0.000000000000000000000000000000000003766 142.0
DYD2_k127_4162163_52 response to hydrogen peroxide - - - 0.00000000000000000000000000000003436 132.0
DYD2_k127_4162163_53 Thiamine monophosphate synthase K00788 - 2.5.1.3 0.00000000000000000000000000000006195 132.0
DYD2_k127_4162163_54 Transcription factor zinc-finger K09981 - - 0.0000000000000000000000000000002922 124.0
DYD2_k127_4162163_55 invasion associated locus B - - - 0.00000000000000000000000001678 114.0
DYD2_k127_4162163_56 PFAM GtrA family protein - - - 0.0000000000000000000000007688 114.0
DYD2_k127_4162163_57 Methyltransferase domain - - - 0.00000000000000000000007657 111.0
DYD2_k127_4162163_58 protein conserved in bacteria - - - 0.0000000000000000000006194 97.0
DYD2_k127_4162163_59 - - - - 0.000000000000004164 80.0
DYD2_k127_4162163_6 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 3.501e-261 812.0
DYD2_k127_4162163_60 - - - - 0.0000000000003217 77.0
DYD2_k127_4162163_61 EF hand - - - 0.0000000000685 72.0
DYD2_k127_4162163_62 Domain of unknown function (DUF4402) - - - 0.0000000001638 68.0
DYD2_k127_4162163_64 Putative prokaryotic signal transducing protein - - - 0.0000000004006 64.0
DYD2_k127_4162163_66 PspC domain K03973 - - 0.000001381 54.0
DYD2_k127_4162163_7 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase K06147 - - 1.111e-257 806.0
DYD2_k127_4162163_8 peptidase U62, modulator of DNA gyrase K03568 - - 1.043e-247 771.0
DYD2_k127_4162163_9 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 1.409e-224 699.0
DYD2_k127_4164590_0 peptidylprolyl isomerase K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001915 324.0
DYD2_k127_4164590_1 Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.000000000000000000000000000000000000000000000000000000000000000003943 227.0
DYD2_k127_4164590_2 peptidylprolyl isomerase K03771 - 5.2.1.8 0.00000000000000000002993 91.0
DYD2_k127_4178811_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1435.0
DYD2_k127_4178811_1 Transporter - - - 2.79e-270 850.0
DYD2_k127_4178811_10 HflC and HflK could regulate a protease K04087 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008855 376.0
DYD2_k127_4178811_11 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002757 370.0
DYD2_k127_4178811_12 Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily K09457 - 1.7.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 282.0
DYD2_k127_4178811_13 phosphorelay signal transduction system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003372 273.0
DYD2_k127_4178811_14 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000165 245.0
DYD2_k127_4178811_15 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.0000000000000000000000000000000000000000000000000000000000000003598 220.0
DYD2_k127_4178811_16 CoA binding domain K06929 - - 0.0000000000000000000000000000000000000000000000000000000000001926 218.0
DYD2_k127_4178811_17 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000000000000000000000000000000000000000000000000000002648 212.0
DYD2_k127_4178811_18 Protein of unknown function (DUF3035) - - - 0.0000000000000000000000000000005625 126.0
DYD2_k127_4178811_19 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.000000000000004593 76.0
DYD2_k127_4178811_2 Bacterial protein of unknown function (DUF853) K06915 - - 3.549e-252 788.0
DYD2_k127_4178811_20 - - - - 0.0000000005917 66.0
DYD2_k127_4178811_22 SnoaL-like domain - - - 0.0003865 49.0
DYD2_k127_4178811_3 Belongs to the peptidase S1C family K04771 - 3.4.21.107 6.467e-238 745.0
DYD2_k127_4178811_4 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 565.0
DYD2_k127_4178811_5 modulator of DNA gyrase K03592 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003275 513.0
DYD2_k127_4178811_6 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007341 417.0
DYD2_k127_4178811_7 Glycerophosphoryl diester phosphodiesterase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003612 400.0
DYD2_k127_4178811_8 Catalyzes the transfer of a sulfur ion to cyanide or to other thiol compounds K01011 - 2.8.1.1,2.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 390.0
DYD2_k127_4178811_9 HflC and HflK could encode or regulate a protease K04088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004868 400.0
DYD2_k127_4236880_0 Transposase Tn5 dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001291 371.0
DYD2_k127_4236880_1 TonB-dependent Receptor Plug Domain - - - 0.0000000000000000004198 89.0
DYD2_k127_4236880_2 - - - - 0.00000000000008145 72.0
DYD2_k127_4254609_0 Dicarboxylate transport - - - 0.0 1110.0
DYD2_k127_4254609_1 MaoC like domain K02618 - 1.2.1.91,3.3.2.12 0.0 1102.0
DYD2_k127_4254609_10 enoyl-CoA hydratase K15866 - 5.3.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003381 402.0
DYD2_k127_4254609_11 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006652 400.0
DYD2_k127_4254609_12 Glycosyltransferase family 87 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005786 384.0
DYD2_k127_4254609_13 PFAM Aminotransferase class I and II K00832 - 2.6.1.57 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 365.0
DYD2_k127_4254609_14 Phenylacetic acid catabolic protein K02611 - 1.14.13.149 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003245 354.0
DYD2_k127_4254609_15 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003638 349.0
DYD2_k127_4254609_16 Belongs to the UPF0758 family K03630 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001386 342.0
DYD2_k127_4254609_17 PFAM inositol monophosphatase K01082 - 3.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002528 319.0
DYD2_k127_4254609_18 amino acid K03294,K03759 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001564 302.0
DYD2_k127_4254609_19 Binds to the 23S rRNA K02939 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005972 289.0
DYD2_k127_4254609_2 Heat shock 70 kDa protein K04043 - - 0.0 1091.0
DYD2_k127_4254609_20 Helix-turn-helix domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001148 252.0
DYD2_k127_4254609_21 Glutathione S-transferase K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000002449 241.0
DYD2_k127_4254609_22 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000001636 232.0
DYD2_k127_4254609_23 - - - - 0.000000000000000000000000000000000000000000000000000000000001766 213.0
DYD2_k127_4254609_24 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.0000000000000000000000000000000000000000000000000000000001152 206.0
DYD2_k127_4254609_25 DNA-binding transcription factor activity - - - 0.000000000000000000000000000000000000000000000000000002495 196.0
DYD2_k127_4254609_26 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000002619 184.0
DYD2_k127_4254609_27 Phenylacetic acid degradation B K02610 - - 0.00000000000000000000000000000000000000000000001752 171.0
DYD2_k127_4254609_28 Thioesterase superfamily K02614 - - 0.0000000000000000000000000000000000000000003582 161.0
DYD2_k127_4254609_29 acetyl propionyl-CoA carboxylase, alpha subunit K01968 - 6.4.1.4 0.00000000000000000000000000000000000000001167 158.0
DYD2_k127_4254609_3 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 2.126e-232 724.0
DYD2_k127_4254609_30 CBS domain - - - 0.00000000000000000000000000000000000000298 152.0
DYD2_k127_4254609_31 endonuclease containing a URI domain K07461 - - 0.000000000000000000000000000000000000003723 147.0
DYD2_k127_4254609_32 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.00000000000000000000000000000000000000664 150.0
DYD2_k127_4254609_33 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.0000000000000000000000000000000000002542 142.0
DYD2_k127_4254609_34 - - - - 0.0000000000000000000000000000000002816 139.0
DYD2_k127_4254609_35 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000000000000000000000000000000004291 138.0
DYD2_k127_4254609_36 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.000000000000000000000000001136 114.0
DYD2_k127_4254609_37 protein conserved in bacteria K09978 - - 0.00000000000000000000000000185 119.0
DYD2_k127_4254609_38 - - - - 0.00000000000000000000000005863 112.0
DYD2_k127_4254609_39 function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex K02116 - - 0.00000000000002181 77.0
DYD2_k127_4254609_4 Ring hydroxylating alpha subunit (catalytic domain) - - - 5.283e-209 655.0
DYD2_k127_4254609_40 YnbE-like lipoprotein - - - 0.000000000006733 74.0
DYD2_k127_4254609_41 - - - - 0.000005492 49.0
DYD2_k127_4254609_5 Phenylacetic acid catabolic protein K02609 - 1.14.13.149 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005402 595.0
DYD2_k127_4254609_6 Oxidoreductase FAD-binding domain K00523,K02613 - 1.17.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009625 516.0
DYD2_k127_4254609_7 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003602 480.0
DYD2_k127_4254609_8 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 420.0
DYD2_k127_4254609_9 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002052 406.0
DYD2_k127_4265525_0 Vitamin K epoxide reductase family - - - 0.0 1092.0
DYD2_k127_4265525_1 Cell division protein FtsI penicillin-binding protein K03587 - 3.4.16.4 2.904e-252 791.0
DYD2_k127_4265525_10 dGTPase family. Type 2 subfamily K01129 - 3.1.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002868 550.0
DYD2_k127_4265525_11 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008749 540.0
DYD2_k127_4265525_12 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000331 530.0
DYD2_k127_4265525_13 Cell wall formation K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001788 520.0
DYD2_k127_4265525_14 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 516.0
DYD2_k127_4265525_15 Cell wall formation K00075 - 1.3.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000251 466.0
DYD2_k127_4265525_16 Sodium/calcium exchanger protein K07301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003177 427.0
DYD2_k127_4265525_17 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005716 423.0
DYD2_k127_4265525_18 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002185 415.0
DYD2_k127_4265525_19 Cell division protein FtsQ K03589 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009886 328.0
DYD2_k127_4265525_2 Arginyl-tRNA synthetase K01887 - 6.1.1.19 3.7e-239 747.0
DYD2_k127_4265525_20 Belongs to the MraZ family K03925 - - 0.000000000000000000000000000000000000000000000000000000000000000000000007917 246.0
DYD2_k127_4265525_21 Glyoxalase-like domain K04750 - - 0.000000000000000000000000000000000000000000000000000000000000001427 222.0
DYD2_k127_4265525_22 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000006915 203.0
DYD2_k127_4265525_23 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.0000000000000000000000000000000000000000000000000001365 189.0
DYD2_k127_4265525_24 - - - - 0.0000000000000000000000000000000000000000005346 166.0
DYD2_k127_4265525_25 - - - - 0.00000000000000000000000000000000000005876 153.0
DYD2_k127_4265525_26 - - - - 0.00000000000000000000000000007267 119.0
DYD2_k127_4265525_27 PEP-CTERM motif - - - 0.000000000000000002533 93.0
DYD2_k127_4265525_3 Belongs to the MurCDEF family K01924 - 6.3.2.8 8.173e-228 713.0
DYD2_k127_4265525_4 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 4.754e-220 685.0
DYD2_k127_4265525_5 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 5.928e-218 684.0
DYD2_k127_4265525_6 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 1.178e-203 649.0
DYD2_k127_4265525_7 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 1.566e-199 628.0
DYD2_k127_4265525_8 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 3.656e-195 616.0
DYD2_k127_4265525_9 Belongs to the SEDS family K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003962 605.0
DYD2_k127_4287588_0 Amidohydrolase family - - - 5.093e-300 934.0
DYD2_k127_4287588_1 - - - - 0.00000000000000000000000000000000000000007856 164.0
DYD2_k127_436152_0 COG3666 Transposase and inactivated derivatives - - - 3.867e-244 758.0
DYD2_k127_436152_1 Transposase DDE domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003015 549.0
DYD2_k127_4373402_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1275.0
DYD2_k127_4373402_1 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 1.121e-226 708.0
DYD2_k127_4373402_10 secretion activating protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002995 280.0
DYD2_k127_4373402_11 Protein of unknown function (DUF2459) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004539 267.0
DYD2_k127_4373402_12 Holin of 3TMs, for gene-transfer release - - - 0.00000000000000000000000000000000000000000000000000000000000000003846 225.0
DYD2_k127_4373402_13 glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000000000000000007658 160.0
DYD2_k127_4373402_14 Alpha-L-arabinofuranosidase B (ABFB) domain - - - 0.00000000000000000000000000000000000003445 158.0
DYD2_k127_4373402_15 Protein of unknown function (DUF3617) - - - 0.000000000000000000000000000000000008467 143.0
DYD2_k127_4373402_16 - - - - 0.00000000000000000000000000000000007758 144.0
DYD2_k127_4373402_17 - - - - 0.00000000000000000000000000000009133 131.0
DYD2_k127_4373402_18 cytochrome - - - 0.000000000000000000000000000002426 126.0
DYD2_k127_4373402_19 Protein of unknown function (DUF3617) - - - 0.00000000000000000006819 96.0
DYD2_k127_4373402_2 Autotransporter beta-domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004454 596.0
DYD2_k127_4373402_20 Beta-lactamase - - - 0.0000000000007525 76.0
DYD2_k127_4373402_3 peptidase M20 K01295 - 3.4.17.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009304 549.0
DYD2_k127_4373402_4 membrane protein, TerC K05794 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008241 541.0
DYD2_k127_4373402_5 Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006361 477.0
DYD2_k127_4373402_6 L,D-transpeptidase catalytic domain K21470 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001493 323.0
DYD2_k127_4373402_7 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004864 304.0
DYD2_k127_4373402_8 CAAX protease self-immunity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004997 308.0
DYD2_k127_4373402_9 L,D-transpeptidase catalytic domain K21470 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 296.0
DYD2_k127_4386780_0 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002222 544.0
DYD2_k127_4386780_1 Protein of unknown function (DUF421) - - - 0.00000000000000000000000000000000000000000000000000001015 194.0
DYD2_k127_4386780_2 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04565 - 1.15.1.1 0.0000000000000000000000000000000000000000000000003164 196.0
DYD2_k127_4386780_3 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04565 - 1.15.1.1 0.000000000000000000000000000000000000000003535 163.0
DYD2_k127_4386780_4 rhamnose metabolic process - - - 0.00000000000000000000000000000000002039 139.0
DYD2_k127_4386780_5 PFAM transposase IS116 IS110 IS902 family K07486 - - 0.00000000000000000000004846 102.0
DYD2_k127_4386780_7 Cold shock K03704 - - 0.00004167 49.0
DYD2_k127_4550323_0 Domain of unknown function (DUF4209) - - - 1.595e-314 972.0
DYD2_k127_4550323_1 type I restriction modification DNA specificity domain K01154,K03427 - 2.1.1.72,3.1.21.3 2.189e-282 885.0
DYD2_k127_4550323_2 AAA ATPase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001526 399.0
DYD2_k127_4550323_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000002033 121.0
DYD2_k127_4550323_4 Protein of unknown function (DUF3800) - - - 0.00000000000001394 76.0
DYD2_k127_4550323_5 type I restriction modification DNA specificity domain K01154,K03427 - 2.1.1.72,3.1.21.3 0.00003242 49.0
DYD2_k127_4550323_6 Type II restriction enzyme, methylase subunits - - - 0.00006681 45.0
DYD2_k127_4614754_0 Belongs to the TPP enzyme family K01652 - 2.2.1.6 1.583e-309 953.0
DYD2_k127_4614754_1 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K00666 - - 2.93e-295 915.0
DYD2_k127_4614754_10 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 495.0
DYD2_k127_4614754_11 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004243 447.0
DYD2_k127_4614754_12 Bacterial extracellular solute-binding proteins, family 5 Middle - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006872 448.0
DYD2_k127_4614754_13 L,D-transpeptidase catalytic domain K21470 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 430.0
DYD2_k127_4614754_14 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit K01028 - 2.8.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002848 415.0
DYD2_k127_4614754_15 ATPase family associated with various cellular activities (AAA) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002182 397.0
DYD2_k127_4614754_16 Acyl CoA acetate 3-ketoacid CoA transferase, beta subunit K01029 - 2.8.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002361 391.0
DYD2_k127_4614754_17 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 373.0
DYD2_k127_4614754_18 Participates in transcription elongation, termination and antitermination K02601 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006249 319.0
DYD2_k127_4614754_19 PFAM Ion transport K10716 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000494 302.0
DYD2_k127_4614754_2 Penicillin-binding Protein K05366 - 2.4.1.129,3.4.16.4 6.608e-278 888.0
DYD2_k127_4614754_20 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005686 280.0
DYD2_k127_4614754_21 SelR domain K07305 - 1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000001274 265.0
DYD2_k127_4614754_22 asparagine synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001553 284.0
DYD2_k127_4614754_23 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000001549 256.0
DYD2_k127_4614754_24 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.0000000000000000000000000000000000000000000000000000000000000000000008065 237.0
DYD2_k127_4614754_25 D-isomer specific 2-hydroxyacid dehydrogenase K03778 - 1.1.1.28 0.000000000000000000000000000000000000000000000000000000000000000000002302 238.0
DYD2_k127_4614754_27 Cold shock protein domain K03704 - - 0.0000000000000000000000000000000000000000000000000000000000000001098 227.0
DYD2_k127_4614754_28 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000002106 239.0
DYD2_k127_4614754_29 Domain of unknown function (DUF4112) - - - 0.00000000000000000000000000000000000000000000000000002221 194.0
DYD2_k127_4614754_3 An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism K01961 - 6.3.4.14,6.4.1.2 8.415e-245 760.0
DYD2_k127_4614754_30 Protein of unknown function (DUF4230) - - - 0.00000000000000000000000000000000000000000000000000005608 201.0
DYD2_k127_4614754_31 TupA-like ATPgrasp - - - 0.000000000000000000000000000000000000000000000000009825 191.0
DYD2_k127_4614754_32 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.0000000000000000000000000000000000000000000000002964 177.0
DYD2_k127_4614754_33 Uncharacterized ACR, COG1430 K09005 - - 0.0000000000000000000000000000000000000000000000008434 182.0
DYD2_k127_4614754_34 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.000000000000000000000000000000000000000000000008927 177.0
DYD2_k127_4614754_35 Glutathione S-transferase, N-terminal domain - - - 0.00000000000000000000000000000000000000000000001164 178.0
DYD2_k127_4614754_36 NADH ubiquinone oxidoreductase 17.2 kD subunit - - - 0.00000000000000000000000000000000000000000000002641 173.0
DYD2_k127_4614754_37 MAPEG family - - - 0.0000000000000000000000000000000000000000000003909 172.0
DYD2_k127_4614754_38 Regulatory protein RecX K03565 - - 0.0000000000000000000000000000000000000000000004335 172.0
DYD2_k127_4614754_39 PFAM Sterol-binding domain protein - - - 0.0000000000000000000000000000000000000000000005937 167.0
DYD2_k127_4614754_4 belongs to the aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 4.434e-229 719.0
DYD2_k127_4614754_40 Antirepressor regulating drug resistance - - - 0.000000000000000000000000000000000000000000002098 180.0
DYD2_k127_4614754_41 arsenate reductase K00537 - 1.20.4.1 0.0000000000000000000000000000000000000006678 151.0
DYD2_k127_4614754_42 Domain of unknown function (DUF1476) - - - 0.000000000000000000000000000000000000003072 148.0
DYD2_k127_4614754_43 Glutathione-dependent formaldehyde-activating enzyme - - - 0.000000000000000000000000000000000009917 141.0
DYD2_k127_4614754_44 Penicillinase repressor - - - 0.00000000000000000000000000000000003513 138.0
DYD2_k127_4614754_45 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.0000000000000000000000000000000004262 142.0
DYD2_k127_4614754_46 polysaccharide biosynthetic process - - - 0.000000000000000000000000000000007214 142.0
DYD2_k127_4614754_47 Belongs to the BolA IbaG family - - - 0.0000000000000000000000000000001539 124.0
DYD2_k127_4614754_48 PRC-barrel domain - - - 0.0000000000000000000000001872 121.0
DYD2_k127_4614754_49 ACT domain K09964 - - 0.0000000000000000000000002797 109.0
DYD2_k127_4614754_5 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 1.303e-196 616.0
DYD2_k127_4614754_51 YjgF/chorismate_mutase-like, putative endoribonuclease - - - 0.000000000000000000003064 103.0
DYD2_k127_4614754_52 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.00000000000000000001075 96.0
DYD2_k127_4614754_53 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.00000000000000000001582 93.0
DYD2_k127_4614754_54 Ion channel - - - 0.000000000000001059 87.0
DYD2_k127_4614754_55 Sugar-transfer associated ATP-grasp - - - 0.00000000000001795 85.0
DYD2_k127_4614754_56 Flp pilus assembly protein, pilin Flp K02651 - - 0.00000000000004352 74.0
DYD2_k127_4614754_57 Flp pilus assembly protein, pilin Flp K02651 - - 0.0000000000005426 70.0
DYD2_k127_4614754_59 Flp/Fap pilin component K02651 - - 0.0000000002816 67.0
DYD2_k127_4614754_6 Erythromycin esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000403 585.0
DYD2_k127_4614754_7 Belongs to the glycosyl hydrolase 43 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006643 584.0
DYD2_k127_4614754_8 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000212 516.0
DYD2_k127_4614754_9 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004391 501.0
DYD2_k127_4754876_0 Peptidase, M16 - - - 0.0 1195.0
DYD2_k127_4754876_1 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 3.01e-296 915.0
DYD2_k127_4754876_10 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006313 399.0
DYD2_k127_4754876_11 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007997 402.0
DYD2_k127_4754876_12 peptidyl-prolyl cis-trans isomerase K01802 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004724 389.0
DYD2_k127_4754876_13 Glutathione S-transferase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007811 357.0
DYD2_k127_4754876_14 Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily K01834 - 5.4.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003337 348.0
DYD2_k127_4754876_15 Methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004684 346.0
DYD2_k127_4754876_16 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000311 298.0
DYD2_k127_4754876_17 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001468 277.0
DYD2_k127_4754876_18 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002224 258.0
DYD2_k127_4754876_19 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000001241 248.0
DYD2_k127_4754876_2 Peptidase, M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004977 568.0
DYD2_k127_4754876_20 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001315 257.0
DYD2_k127_4754876_21 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000001606 216.0
DYD2_k127_4754876_22 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.00000000000000000000000000000000000000000000000000000000001515 221.0
DYD2_k127_4754876_23 Cupin 2, conserved barrel - - - 0.000000000000000000000000000000000000000000000000000000004984 200.0
DYD2_k127_4754876_24 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000000000000000000000000000000002888 195.0
DYD2_k127_4754876_25 Peptidyl-prolyl cis-trans K03772 - 5.2.1.8 0.0000000000000000000000000000000000000000000385 167.0
DYD2_k127_4754876_26 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.00000000000000000000000000000001333 126.0
DYD2_k127_4754876_27 - - - - 0.00000000000000000000000000000003981 137.0
DYD2_k127_4754876_28 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.0000000000000000000000000008708 116.0
DYD2_k127_4754876_29 - - - - 0.000000000000000000000000005856 114.0
DYD2_k127_4754876_3 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate K08289 - 2.1.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 550.0
DYD2_k127_4754876_31 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.0000000000000003914 79.0
DYD2_k127_4754876_33 Domain of unknown function (DUF4437) - - - 0.00000000000005432 78.0
DYD2_k127_4754876_4 Carboxypeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001942 528.0
DYD2_k127_4754876_5 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006252 457.0
DYD2_k127_4754876_6 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 457.0
DYD2_k127_4754876_7 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000381 435.0
DYD2_k127_4754876_8 protein conserved in bacteria K21470 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 441.0
DYD2_k127_4754876_9 permease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007076 415.0
DYD2_k127_4765574_0 COG3666 Transposase and inactivated derivatives - - - 1.783e-210 662.0
DYD2_k127_4765574_1 PFAM transposase, IS4 family protein - - - 0.000000000000000000000000000009562 121.0
DYD2_k127_4765759_0 Resolvase domain - - - 2.008e-311 968.0
DYD2_k127_4765759_1 Winged helix-turn helix - - - 0.00000000000000000000000000000000000000000000002124 182.0
DYD2_k127_4765759_2 Family of unknown function (DUF5372) - - - 0.00000000000000000003903 94.0
DYD2_k127_4765759_3 Integrase core domain - - - 0.0000000000000000008476 87.0
DYD2_k127_4805650_0 AAA domain, putative AbiEii toxin, Type IV TA system K02032 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004532 321.0
DYD2_k127_4805650_1 ATPases associated with a variety of cellular activities K02031 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002581 299.0
DYD2_k127_4805650_2 FecR protein - - - 0.000000000000000000002984 102.0
DYD2_k127_4854389_0 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003296 501.0
DYD2_k127_4854389_1 Dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 467.0
DYD2_k127_4854389_10 Flp/Fap pilin component K02651 - - 0.00000000000004385 73.0
DYD2_k127_4854389_11 histidine kinase, dimerisation and phosphoacceptor region - - - 0.000000000002005 80.0
DYD2_k127_4854389_12 Flp pilus assembly protein RcpC/CpaB K02279 - - 0.000000004011 59.0
DYD2_k127_4854389_2 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 283.0
DYD2_k127_4854389_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000542 297.0
DYD2_k127_4854389_4 Glycosyltransferase family 87 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003197 289.0
DYD2_k127_4854389_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001432 261.0
DYD2_k127_4854389_6 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.000000000000000000000000000000000000000000000000000000004385 201.0
DYD2_k127_4854389_7 Domain of unknown function DUF302 - - - 0.00000000000000000000000000000000000000000005061 166.0
DYD2_k127_4854389_8 PFAM phospholipase Carboxylesterase K06999 - - 0.000000000000000000000000000000000006933 147.0
DYD2_k127_4854389_9 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.00000000000000000000000000000004422 128.0
DYD2_k127_4939127_0 Transposase K07487 - - 4.87e-253 786.0
DYD2_k127_5002510_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 7.66e-267 824.0
DYD2_k127_5002510_1 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 2.318e-237 738.0
DYD2_k127_5002510_2 argininosuccinate lyase K01755 - 4.3.2.1 2.021e-208 658.0
DYD2_k127_5002510_3 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005464 543.0
DYD2_k127_5002510_4 hydrolases or acyltransferases (alpha beta hydrolase superfamily) K00433 - 1.11.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001563 490.0
DYD2_k127_5002510_5 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001775 458.0
DYD2_k127_5002510_6 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000062 376.0
DYD2_k127_5002510_7 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016020,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0030312,GO:0031406,GO:0034618,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004494 287.0
DYD2_k127_5002510_8 Arginine repressor, DNA binding domain K03402 - - 0.0000000000000000000000000000000001147 136.0
DYD2_k127_5006828_0 Glycosyl hydrolase family 65 central catalytic domain protein K00691,K05342 - 2.4.1.64,2.4.1.8 0.0 1091.0
DYD2_k127_5006828_1 Alkaline phosphatase K01113 - 3.1.3.1 3.722e-282 882.0
DYD2_k127_5006828_10 Chalcone and stilbene synthases, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008704 464.0
DYD2_k127_5006828_11 glucose sorbosone - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004726 440.0
DYD2_k127_5006828_12 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002479 398.0
DYD2_k127_5006828_13 Galactose 1-dehydrogenase K00035 - 1.1.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005262 411.0
DYD2_k127_5006828_14 Aldose 1-epimerase K01785 - 5.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001906 380.0
DYD2_k127_5006828_15 C-terminal domain of 1-Cys peroxiredoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003186 366.0
DYD2_k127_5006828_16 2-keto-3-deoxy-galactonokinase K00883 - 2.7.1.58 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002953 325.0
DYD2_k127_5006828_17 pfkB family carbohydrate kinase K00882,K16370 - 2.7.1.11,2.7.1.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003084 321.0
DYD2_k127_5006828_18 Crp-like helix-turn-helix domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002232 275.0
DYD2_k127_5006828_19 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002923 276.0
DYD2_k127_5006828_2 Glycosyl hydrolase family 1 - - - 3.052e-237 740.0
DYD2_k127_5006828_20 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000014 291.0
DYD2_k127_5006828_21 Aldolase K01631 - 4.1.2.21 0.00000000000000000000000000000000000000000000000000000000000000000000008875 244.0
DYD2_k127_5006828_22 thiolester hydrolase activity K06889 - - 0.00000000000000000000000000000000000000000000000000000000000000001346 238.0
DYD2_k127_5006828_23 Required for maturation of 30S ribosomal subunits K09748 - - 0.0000000000000000000000000000000000000000000000000000000000002489 216.0
DYD2_k127_5006828_24 Phospholipid methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000008861 205.0
DYD2_k127_5006828_25 Domain of unknown function DUF302 - - - 0.00000000000000000000000000000000000000000001237 168.0
DYD2_k127_5006828_26 cheY-homologous receiver domain - - - 0.000000000000000000000000000000006887 131.0
DYD2_k127_5006828_29 LytTr DNA-binding domain K02477 - - 0.000000000002896 75.0
DYD2_k127_5006828_3 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 1.407e-227 709.0
DYD2_k127_5006828_4 mandelate racemase muconate lactonizing K01684,K01781,K08323 - 4.2.1.6,4.2.1.8,5.1.2.2 8.005e-211 659.0
DYD2_k127_5006828_5 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001546 568.0
DYD2_k127_5006828_6 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000535 508.0
DYD2_k127_5006828_7 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003423 511.0
DYD2_k127_5006828_8 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01738 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004124,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019344,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000435 487.0
DYD2_k127_5006828_9 HWE histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003025 462.0
DYD2_k127_5072513_0 Histidine kinase - - - 4.318e-291 914.0
DYD2_k127_5072513_1 GMC oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001715 546.0
DYD2_k127_5076478_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001736 299.0
DYD2_k127_5076478_1 helix_turn_helix, Lux Regulon - - - 0.000000005175 60.0
DYD2_k127_5076478_2 cheY-homologous receiver domain - - - 0.0000006176 57.0
DYD2_k127_5105881_1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000008331 121.0
DYD2_k127_5105881_2 phosphatidate phosphatase activity K19302 - 3.6.1.27 0.0000002535 56.0
DYD2_k127_5105881_3 Protein of unknown function (DUF4256) - - - 0.0001727 45.0
DYD2_k127_512916_0 acetylornithine aminotransferase K00821 - 2.6.1.11,2.6.1.17 4.32e-217 678.0
DYD2_k127_512916_1 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001716 457.0
DYD2_k127_512916_10 coproporphyrinogen III oxidase K00228 - 1.3.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000009002 253.0
DYD2_k127_512916_11 Cupin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001819 281.0
DYD2_k127_512916_12 OsmC-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000001009 231.0
DYD2_k127_512916_13 N-acetyltransferase - - - 0.000000000000000000000000000000000000000003177 162.0
DYD2_k127_512916_14 - - - - 0.000000000000000000000000000002894 130.0
DYD2_k127_512916_16 - - - - 0.000000000000000000000000679 108.0
DYD2_k127_512916_17 N-acetyltransferase - - - 0.000000000000000005189 87.0
DYD2_k127_512916_2 Transport permease protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006378 425.0
DYD2_k127_512916_3 Mycolic acid cyclopropane synthetase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001527 369.0
DYD2_k127_512916_4 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009083 358.0
DYD2_k127_512916_5 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000965 367.0
DYD2_k127_512916_6 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005183 330.0
DYD2_k127_512916_7 GcrA cell cycle regulator K13583 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 323.0
DYD2_k127_512916_8 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005133 304.0
DYD2_k127_512916_9 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001372 273.0
DYD2_k127_5142349_0 Belongs to the heme-copper respiratory oxidase family K00404 - 1.9.3.1 1.072e-310 958.0
DYD2_k127_5142349_1 P-type ATPase K01533 - 3.6.3.4 8.001e-256 807.0
DYD2_k127_5142349_10 Peptidase S41 K00405 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002509 409.0
DYD2_k127_5142349_11 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 386.0
DYD2_k127_5142349_12 Uracil-DNA glycosylase K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 350.0
DYD2_k127_5142349_13 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007767 355.0
DYD2_k127_5142349_14 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007968 259.0
DYD2_k127_5142349_15 Protein of unknown function (DUF938) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004888 246.0
DYD2_k127_5142349_16 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.00000000000000000000000000000000000000000000000000000000000000003373 226.0
DYD2_k127_5142349_17 PilZ domain - - - 0.0000000000000000000000000000000000000000000000000000000000000002726 227.0
DYD2_k127_5142349_18 Ribose 5-phosphate isomerase K01808 - 5.3.1.6 0.0000000000000000000000000000000000000000000000000000000000000005056 222.0
DYD2_k127_5142349_19 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase K00950 - 2.7.6.3 0.000000000000000000000000000000000000000000000002327 178.0
DYD2_k127_5142349_2 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 1.285e-250 779.0
DYD2_k127_5142349_20 Phospholipid methyltransferase - - - 0.0000000000000000000000000000000000000000000203 172.0
DYD2_k127_5142349_21 Integral membrane protein linked to a cation - - - 0.000000000000000000000000000000002227 136.0
DYD2_k127_5142349_23 Cytochrome oxidase maturation protein cbb3-type - - - 0.000000000001253 78.0
DYD2_k127_5142349_24 SnoaL-like domain - - - 0.000000000002186 75.0
DYD2_k127_5142349_25 Cbb3-type cytochrome oxidase K00407 - - 0.000000000002353 69.0
DYD2_k127_5142349_26 CopC domain K07156 - - 0.0000002899 57.0
DYD2_k127_5142349_3 Outer membrane receptor proteins, mostly Fe transport - - - 5.263e-235 756.0
DYD2_k127_5142349_4 Nitrogen fixation protein fixG - - - 1.117e-231 724.0
DYD2_k127_5142349_5 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004081 509.0
DYD2_k127_5142349_6 N-carbamoylputrescine amidase K12251 - 3.5.1.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001388 497.0
DYD2_k127_5142349_7 Belongs to the agmatine deiminase family K10536 - 3.5.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001737 489.0
DYD2_k127_5142349_8 C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex K00406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002988 430.0
DYD2_k127_5142349_9 Glycine dehydrogenase (aminomethyl-transferring) K00283 - 1.4.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004408 396.0
DYD2_k127_5143444_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0 1217.0
DYD2_k127_5143444_1 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0 1205.0
DYD2_k127_5143444_2 Participates in both transcription termination and antitermination K02600 - - 1.684e-278 863.0
DYD2_k127_5143444_3 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002099 367.0
DYD2_k127_5143444_4 thymidine kinase K00857 - 2.7.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009907 315.0
DYD2_k127_5143444_5 Nucleic-acid-binding protein K07742 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005041 277.0
DYD2_k127_5143444_6 Acetyltransferase (GNAT) domain K22479 - - 0.0000000000000000000000000000000000000000000000000000000000000000005087 233.0
DYD2_k127_5143444_7 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000000000000000000000000000000000000000000000000001086 208.0
DYD2_k127_5143444_8 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.00000000000000000000000000000000000000004877 156.0
DYD2_k127_5143444_9 Required for maturation of 30S ribosomal subunits K09748 - - 0.0000000000000000001343 90.0
DYD2_k127_5196308_0 Histidine kinase K14980 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003526 571.0
DYD2_k127_5196308_1 Displays ATPase and GTPase activities K06958 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008715 296.0
DYD2_k127_5196308_2 Serine kinase of the HPr protein, regulates carbohydrate metabolism - - - 0.00000000000000000000000000000000000000000000000000000000000001488 218.0
DYD2_k127_52954_0 Type II/IV secretion system protein K02283 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004515 438.0
DYD2_k127_52954_1 type II secretion system protein K12511 - - 0.0000000000000000000000000000007035 134.0
DYD2_k127_52954_2 Putative Tad-like Flp pilus-assembly - - - 0.000000000000000000000000000005575 132.0
DYD2_k127_52954_3 COG4963 Flp pilus assembly protein, ATPase CpaE K02282 - - 0.00000000000000000001878 106.0
DYD2_k127_52954_4 type II secretion system protein K12510 - - 0.0000000000000000006858 100.0
DYD2_k127_52954_5 TIGRFAM Flp pilus assembly protein CpaB K02279 - - 0.000000000000000002841 95.0
DYD2_k127_5333915_0 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 1.225e-245 764.0
DYD2_k127_5333915_1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 1.423e-197 626.0
DYD2_k127_5333915_10 Biopolymer transport protein ExbD/TolR K03559 - - 0.00000000000000000000000000000000000000000000000000000000000000000004495 234.0
DYD2_k127_5333915_11 Prolyl-tRNA synthetase - - - 0.000000000000000000000000000000000000000000000000000000004784 204.0
DYD2_k127_5333915_12 Biopolymer transport protein K03559 - - 0.0000000000000000000000000000000000000000000000000000003542 196.0
DYD2_k127_5333915_13 Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000000000000000000000005335 196.0
DYD2_k127_5333915_14 nad(P) transhydrogenase subunit alpha K00324 - 1.6.1.2 0.00000000000000000000000000000000000000000004735 162.0
DYD2_k127_5333915_15 dihydroneopterin aldolase K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.0000000000000000000000000000000000000000001009 163.0
DYD2_k127_5333915_16 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.0000000000000000000001213 99.0
DYD2_k127_5333915_17 aspartate racemase K01779 - 5.1.1.13 0.0000000000003197 72.0
DYD2_k127_5333915_2 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004028 581.0
DYD2_k127_5333915_3 NAD(P) transhydrogenase subunit alpha K00324 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003846 545.0
DYD2_k127_5333915_4 dihydropteroate synthase K00796 - 2.5.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 452.0
DYD2_k127_5333915_5 MotA TolQ ExbB proton channel K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004365 385.0
DYD2_k127_5333915_6 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 318.0
DYD2_k127_5333915_7 FAD dependent oxidoreductase K19746 - 1.4.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008918 312.0
DYD2_k127_5333915_8 Phosphodiester glycosidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000473 282.0
DYD2_k127_5333915_9 Periplasmic protein TonB, links inner and outer membranes K03832 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006991 252.0
DYD2_k127_5360977_0 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 - 1.3.5.1,1.3.5.4 0.0 1125.0
DYD2_k127_5360977_1 Required for chromosome condensation and partitioning K03529 - - 0.0 1122.0
DYD2_k127_5360977_10 beta-glucosidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 524.0
DYD2_k127_5360977_11 in Escherichia coli this protein forms a dimer and binds manganese K11532 - 3.1.3.11,3.1.3.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009876 518.0
DYD2_k127_5360977_12 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003388 511.0
DYD2_k127_5360977_13 UDP-galactopyranose mutase K01854 - 5.4.99.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002688 479.0
DYD2_k127_5360977_14 Inner membrane protein CreD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 461.0
DYD2_k127_5360977_15 Cytochrome p450 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001736 459.0
DYD2_k127_5360977_16 Rossmann fold nucleotide-binding protein K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002021 451.0
DYD2_k127_5360977_17 glycosylase K03575 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002094 395.0
DYD2_k127_5360977_18 Belongs to the glycosyl hydrolase 43 family K06113 - 3.2.1.99 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 390.0
DYD2_k127_5360977_19 chemotaxis K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 392.0
DYD2_k127_5360977_2 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0 1094.0
DYD2_k127_5360977_20 beta-lactamase K17836 - 3.5.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006007 351.0
DYD2_k127_5360977_21 RarD protein K05786 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002893 348.0
DYD2_k127_5360977_22 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 318.0
DYD2_k127_5360977_23 UPF0126 domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007667 311.0
DYD2_k127_5360977_24 Belongs to the Nudix hydrolase family K03426 - 3.6.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004459 303.0
DYD2_k127_5360977_25 Protein of unknown function (DUF3667) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004915 298.0
DYD2_k127_5360977_26 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002922 295.0
DYD2_k127_5360977_27 Domain of unknown function (DUF4893) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001289 277.0
DYD2_k127_5360977_28 pathogenesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002091 273.0
DYD2_k127_5360977_29 Hydrolase K01091 - 3.1.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000000002034 259.0
DYD2_k127_5360977_3 acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01966 - 2.1.3.15,6.4.1.3 7.872e-300 923.0
DYD2_k127_5360977_30 cytochrome C K08738 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002629 257.0
DYD2_k127_5360977_31 Domain of Unknown Function (DUF1206) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002453 252.0
DYD2_k127_5360977_32 Thioredoxin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002878 251.0
DYD2_k127_5360977_33 Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol K06134 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002659 248.0
DYD2_k127_5360977_34 methylmalonyl-CoA epimerase K05606 - 5.1.99.1 0.000000000000000000000000000000000000000000000000000000000000000000002836 237.0
DYD2_k127_5360977_35 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000003971 243.0
DYD2_k127_5360977_36 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000003237 231.0
DYD2_k127_5360977_37 Protein of unknown function (DUF721) - - - 0.0000000000000000000000000000000000000000000000000000000000000003357 224.0
DYD2_k127_5360977_38 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.0000000000000000000000000000000000000000000000000000000000002459 217.0
DYD2_k127_5360977_39 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.00000000000000000000000000000000000000000000000001028 187.0
DYD2_k127_5360977_4 TonB dependent receptor K16090 - - 3.403e-289 903.0
DYD2_k127_5360977_40 OsmC-like protein - - - 0.00000000000000000000000000000000000000000000000003979 184.0
DYD2_k127_5360977_41 Protein of unknown function (DUF2721) - - - 0.000000000000000000000000000000000000000000000001239 179.0
DYD2_k127_5360977_42 Membrane-bound metallopeptidase - - - 0.00000000000000000000000000000000000000000000005733 184.0
DYD2_k127_5360977_43 Putative FMN-binding domain K07734 - - 0.000000000000000000000000000000000000000000008002 175.0
DYD2_k127_5360977_44 succinate dehydrogenase K00241 - - 0.0000000000000000000000000000000000000000002164 162.0
DYD2_k127_5360977_45 Disulfide bond formation protein - - - 0.0000000000000000000000000000000000000000003969 162.0
DYD2_k127_5360977_46 - - - - 0.000000000000000000000000000000000000000001113 161.0
DYD2_k127_5360977_47 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000002027 154.0
DYD2_k127_5360977_48 succinate dehydrogenase activity K00242 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000002917 133.0
DYD2_k127_5360977_5 poly(R)-hydroxyalkanoic acid synthase K03821 - - 2.209e-272 852.0
DYD2_k127_5360977_50 - - - - 0.00000000000000000000000000009203 124.0
DYD2_k127_5360977_51 membrane - - - 0.0000000000000000000000922 98.0
DYD2_k127_5360977_52 Chaperone required for the assembly of the mitochondrial F1-ATPase - - - 0.00000000000000000002988 95.0
DYD2_k127_5360977_53 COG0491 Zn-dependent hydrolases, including glyoxylases K17837 - 3.5.2.6 0.000000000000006196 76.0
DYD2_k127_5360977_54 - - - - 0.00000000000001568 80.0
DYD2_k127_5360977_6 amino acid peptide transporter K03305 - - 7.317e-212 668.0
DYD2_k127_5360977_7 Belongs to the peptidase S41A family K03797 - 3.4.21.102 6.086e-208 666.0
DYD2_k127_5360977_8 UDP-galactopyranose mutase K01854 - 5.4.99.9 2.017e-197 621.0
DYD2_k127_5360977_9 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001988 619.0
DYD2_k127_5395444_0 PFAM helix-turn-helix- domain containing protein AraC type - - - 0.00000000000000000000000000000000000000000000000000000002317 205.0
DYD2_k127_5395444_1 Cytochrome P460 - - - 0.0000000000000000000000000172 119.0
DYD2_k127_5420597_0 Belongs to the ClpA ClpB family K03694 - - 0.0 1259.0
DYD2_k127_5420597_1 Peptidase, M28 - - - 2.355e-252 789.0
DYD2_k127_5420597_10 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.0000000000000000000000000000000000000000000000000000002434 202.0
DYD2_k127_5420597_11 TIGRFAM outer membrane adhesin like proteiin - - - 0.00000000000000000000000000000000006502 153.0
DYD2_k127_5420597_12 - - - - 0.0000000000000000000000000000003062 124.0
DYD2_k127_5420597_13 Protein of unknown function (DUF1192) - - - 0.000001952 52.0
DYD2_k127_5420597_2 peptidase M13 - - - 3.452e-250 777.0
DYD2_k127_5420597_3 Lactonase, 7-bladed beta-propeller - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006102 368.0
DYD2_k127_5420597_4 Belongs to the BI1 family K06890 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004031 334.0
DYD2_k127_5420597_5 Phytanoyl-CoA dioxygenase (PhyH) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003232 334.0
DYD2_k127_5420597_6 dienelactone hydrolase K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005781 308.0
DYD2_k127_5420597_7 Glutathione S-transferase K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000001145 262.0
DYD2_k127_5420597_8 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000003753 232.0
DYD2_k127_5420597_9 COG2931, RTX toxins and related Ca2 -binding proteins K20276 - - 0.0000000000000000000000000000000000000000000000000000000000000004749 243.0
DYD2_k127_5433605_0 Belongs to the peptidase M17 family K01255 - 3.4.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001577 599.0
DYD2_k127_5433605_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003958 571.0
DYD2_k127_5433605_2 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002453 397.0
DYD2_k127_5433605_3 Winged helix DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000001518 202.0
DYD2_k127_5433605_4 PFAM blue (type 1) copper domain protein - - - 0.0000000000000000000000000000008809 128.0
DYD2_k127_5433605_5 NLP P60 protein - - - 0.0000000000000000000002537 102.0
DYD2_k127_5433605_6 Helix-turn-helix domain - - - 0.00000000001293 71.0
DYD2_k127_5433605_7 Serine aminopeptidase, S33 - - - 0.00009384 47.0
DYD2_k127_5490654_0 CS1-pili formation C-terminal K21966 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007102 547.0
DYD2_k127_5490654_1 Short chain dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005587 443.0
DYD2_k127_5490654_10 PFAM Transposase IS116 IS110 IS902 family, Transposase - - - 0.00000000000000000000000000000005742 136.0
DYD2_k127_5490654_11 Histidine kinase K00575 - 2.1.1.80 0.0000000000000000000000000001316 118.0
DYD2_k127_5490654_12 - - - - 0.00000000000000000000000001641 117.0
DYD2_k127_5490654_13 - - - - 0.00000000000000000000000002564 115.0
DYD2_k127_5490654_14 - - - - 0.00000000000000000000000006816 113.0
DYD2_k127_5490654_15 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.000000000000000000000008842 104.0
DYD2_k127_5490654_16 Transcriptional regulator - - - 0.000000000000000000005338 98.0
DYD2_k127_5490654_17 Transcriptional regulator - - - 0.00000000000000000000999 98.0
DYD2_k127_5490654_18 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.0000000000000000002499 93.0
DYD2_k127_5490654_19 - - - - 0.00000000000006359 76.0
DYD2_k127_5490654_2 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002177 434.0
DYD2_k127_5490654_20 Integrase - - - 0.00000000000008636 71.0
DYD2_k127_5490654_21 Transcriptional regulator - - - 0.000000000007606 72.0
DYD2_k127_5490654_22 - - - - 0.00000000003529 66.0
DYD2_k127_5490654_23 - - - - 0.000000001355 67.0
DYD2_k127_5490654_24 transcriptional regulator K03710 - - 0.0007654 48.0
DYD2_k127_5490654_25 sequence-specific DNA binding - - - 0.0009234 48.0
DYD2_k127_5490654_3 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006958 390.0
DYD2_k127_5490654_4 esterase of the alpha-beta hydrolase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007441 255.0
DYD2_k127_5490654_5 SnoaL-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000175 210.0
DYD2_k127_5490654_6 Chaperone - - - 0.000000000000000000000000000000000000000000000000000000009749 206.0
DYD2_k127_5490654_7 SnoaL-like domain - - - 0.0000000000000000000000000000000000000000000000000009022 190.0
DYD2_k127_5490654_8 - - - - 0.0000000000000000000000000000000000000000000006026 172.0
DYD2_k127_5490654_9 Pas domain - - - 0.000000000000000000000000000000000000000000005856 167.0
DYD2_k127_5514472_0 DNA ligase K01971 - 6.5.1.1 0.0 1148.0
DYD2_k127_5514472_1 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 5.871e-251 783.0
DYD2_k127_5514472_10 Belongs to the peptidase S33 family K01259 - 3.4.11.5 0.00000000000000000000000000000000001206 137.0
DYD2_k127_5514472_11 BFD-like [2Fe-2S] binding domain K02192 - - 0.0000000002519 65.0
DYD2_k127_5514472_2 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 2.089e-230 719.0
DYD2_k127_5514472_3 Major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 531.0
DYD2_k127_5514472_4 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005188 403.0
DYD2_k127_5514472_5 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006701 374.0
DYD2_k127_5514472_6 Protein of unknown function (DUF418) K07148 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007966 380.0
DYD2_k127_5514472_7 Iron-storage protein, whose ferroxidase center binds Fe(2 ) ions, oxidizes them by dioxygen to Fe(3 ), and participates in the subsequent Fe(3 ) oxide mineral core formation within the central cavity of the protein complex K03594 - 1.16.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002607 267.0
DYD2_k127_5514472_8 Hpt domain K20976 - - 0.00000000000000000000000000000000000000000000000000000000000004172 216.0
DYD2_k127_5514472_9 - - - - 0.00000000000000000000000000000000000000000000001207 175.0
DYD2_k127_5573978_0 COG0518 GMP synthase - Glutamine amidotransferase domain K01951 - 6.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 306.0
DYD2_k127_5573978_1 PFAM Adenylate and Guanylate cyclase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001122 298.0
DYD2_k127_5573978_2 - - - - 0.000000000000000000000000000000000000000003537 160.0
DYD2_k127_5573978_3 AraC-binding-like domain - - - 0.00000000000000000002743 106.0
DYD2_k127_5668363_0 Peptidase family M13 K07386 - - 0.0 1086.0
DYD2_k127_5668363_1 Peptidase family M3 K01284 - 3.4.15.5 0.0 1014.0
DYD2_k127_5668363_10 Dioxygenase K00449 - 1.13.11.3 0.00000000000000000000000000000000000000000000000000000000000000000000000004346 255.0
DYD2_k127_5668363_11 membrane K08988 - - 0.000000000000000000000000000000000000000000000000000000000000000000000008708 258.0
DYD2_k127_5668363_12 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002803 247.0
DYD2_k127_5668363_13 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000856 216.0
DYD2_k127_5668363_14 Nudix hydrolase K01515 - 3.6.1.13 0.00000000000000000000000000000000000000000000000000000000007613 210.0
DYD2_k127_5668363_15 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.000000000000000000000000000000000000000000000000000001 195.0
DYD2_k127_5668363_16 Methanol dehydrogenase K06872 - - 0.00000000000000000000000000000000000000000000001234 185.0
DYD2_k127_5668363_17 Endoribonuclease L-PSP - - - 0.0000000000000000000000000000000000000006547 153.0
DYD2_k127_5668363_18 - - - - 0.0000000000000000009604 97.0
DYD2_k127_5668363_19 Tetratricopeptide repeat - - - 0.00000000624 64.0
DYD2_k127_5668363_2 acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01969 - 6.4.1.4 1.189e-303 936.0
DYD2_k127_5668363_3 2-nitropropane dioxygenase - - - 1.202e-279 862.0
DYD2_k127_5668363_4 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00626 - 2.3.1.9 3.288e-217 678.0
DYD2_k127_5668363_5 Catalyzes the formation of 3-methylbut-2-enoyl CoA from 3-methylbutanoyl CoA K00253 - 1.3.8.4 5.411e-212 663.0
DYD2_k127_5668363_6 Aminoglycoside phosphotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003783 574.0
DYD2_k127_5668363_7 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003224 568.0
DYD2_k127_5668363_8 Belongs to the NadC ModD family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006032 405.0
DYD2_k127_5668363_9 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007869 362.0
DYD2_k127_5680064_0 Elements of external origin K07497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002031 282.0
DYD2_k127_5680064_1 Haemolysin secretion/activation protein ShlB/FhaC/HecB - - - 0.0000000000000000000000000000000000000000000002729 171.0
DYD2_k127_5680064_2 Evidence 2b Function of strongly homologous gene K07497 - - 0.0000000000000000000000000000000004585 133.0
DYD2_k127_5680064_3 glutathione S-transferase K00799 - 2.5.1.18 0.00000000000008237 80.0
DYD2_k127_5680064_4 TIGRFAM YD repeat protein - - - 0.000051 49.0
DYD2_k127_5700945_0 Transposase, Mutator family K07493 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002755 426.0
DYD2_k127_5700945_1 sulfate reduction K00390,K00957 - 1.8.4.10,1.8.4.8,2.7.7.4 0.0000000000000000000000000000000119 129.0
DYD2_k127_5705697_0 COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes K00382 - 1.8.1.4 1.715e-252 784.0
DYD2_k127_5705697_1 Thiol disulfide interchange protein - - - 3.893e-244 771.0
DYD2_k127_5705697_2 signal peptide peptidase K04773 - - 3.668e-208 664.0
DYD2_k127_5705697_3 Metal-dependent hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004897 601.0
DYD2_k127_5705697_4 Threonine dehydratase K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009681 516.0
DYD2_k127_5705697_5 conserved secreted or membrane protein precursor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004182 275.0
DYD2_k127_5705697_6 Bacterial transcriptional repressor C-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003985 265.0
DYD2_k127_5705697_7 - - - - 0.000000000000000000000000000000000000000000000000000718 202.0
DYD2_k127_5705697_8 Protein of unknown function (DUF1761) - - - 0.0000000000000000000000000000000000000000001742 162.0
DYD2_k127_5728640_0 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K00658 - 2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002059 560.0
DYD2_k127_5728640_1 Transketolase, pyrimidine binding domain K11381 - 1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002426 535.0
DYD2_k127_5728640_2 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009318 317.0
DYD2_k127_5728640_3 - - - - 0.00000000000000000000002514 111.0
DYD2_k127_5728640_4 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000001065 54.0
DYD2_k127_5728640_5 - - - - 0.00001619 56.0
DYD2_k127_5764105_0 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001433 462.0
DYD2_k127_5764105_1 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002667 277.0
DYD2_k127_5764105_2 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K00666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000194 245.0
DYD2_k127_5791829_0 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008304 302.0
DYD2_k127_5791829_1 NMT1-like family K02051 - - 0.00000000000000000000000000000000000000000000000000000002045 212.0
DYD2_k127_5791829_2 response regulator K02485 - - 0.0000000000000000000000000000000000000000000000005345 185.0
DYD2_k127_5791829_3 Diguanylate cyclase - - - 0.0000000000000000000000000000000000204 150.0
DYD2_k127_5791829_4 Diguanylate cyclase K21023 - 2.7.7.65 0.000000000000000009943 96.0
DYD2_k127_58368_0 peptidyl-arginine hydroxylation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005032 262.0
DYD2_k127_58368_1 repeat-containing protein - - - 0.00000000000000001577 88.0
DYD2_k127_58368_2 2OG-Fe(II) oxygenase superfamily - - - 0.0004395 45.0
DYD2_k127_5859721_0 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 0.0 1145.0
DYD2_k127_5859721_1 Pyridoxal-dependent decarboxylase K13745 - 4.1.1.86 9.727e-206 649.0
DYD2_k127_5859721_2 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004432 364.0
DYD2_k127_5859721_3 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005613 300.0
DYD2_k127_5874947_0 Transposase DDE domain group 1 - - - 0.00000000000000000000000000000000000000000000009539 186.0
DYD2_k127_5883176_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005093 454.0
DYD2_k127_5883176_1 GcrA cell cycle regulator K13583 - - 0.00000000000000000000000002076 111.0
DYD2_k127_5910670_0 amino acid peptide transporter K03305 - - 3.064e-266 827.0
DYD2_k127_5910670_1 amidohydrolase - - - 6.655e-227 712.0
DYD2_k127_5910670_2 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 1.365e-223 699.0
DYD2_k127_5910670_3 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008609 561.0
DYD2_k127_5910670_4 amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002 492.0
DYD2_k127_5910670_5 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 326.0
DYD2_k127_5910670_6 Belongs to the N(4) N(6)-methyltransferase family K13581 - 2.1.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000003592 261.0
DYD2_k127_5910670_7 NnrU protein - - - 0.00000000000000000000000000000000000000000000000000000000000003249 220.0
DYD2_k127_5977662_0 protein conserved in bacteria K09800 - - 0.0 1519.0
DYD2_k127_5977662_1 COG0729 Outer membrane protein K07278 - - 1.052e-255 805.0
DYD2_k127_5977662_10 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000001123 240.0
DYD2_k127_5977662_11 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000007702 218.0
DYD2_k127_5977662_12 Putative peptidoglycan binding domain - - - 0.000000000000000000000000000000000000000000000000000268 188.0
DYD2_k127_5977662_13 DNA-binding protein K11940 - - 0.000000000000000000000000000000000000000000000000001395 184.0
DYD2_k127_5977662_14 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.0000000000000000000000000000000000000000000000001201 182.0
DYD2_k127_5977662_15 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000003396 132.0
DYD2_k127_5977662_16 Isochorismatase family - - - 0.0000000000000000000000000005363 128.0
DYD2_k127_5977662_17 acyl carrier protein - - - 0.0000000000000000000000001469 106.0
DYD2_k127_5977662_18 PEP-CTERM motif - - - 0.0000000000004815 78.0
DYD2_k127_5977662_19 Recombinase zinc beta ribbon domain - - - 0.0000000000007919 71.0
DYD2_k127_5977662_2 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000208 511.0
DYD2_k127_5977662_3 epimerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008014 419.0
DYD2_k127_5977662_4 Predicted metal-dependent hydrolase K07044 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 399.0
DYD2_k127_5977662_5 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004384 402.0
DYD2_k127_5977662_6 Predicted membrane protein (DUF2254) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003022 369.0
DYD2_k127_5977662_7 COG2041 Sulfite oxidase and related enzymes - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001464 362.0
DYD2_k127_5977662_8 Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005278 323.0
DYD2_k127_5977662_9 protein conserved in bacteria K09990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002076 320.0
DYD2_k127_5983385_0 ABC transporter - - - 0.0 1024.0
DYD2_k127_5983385_1 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K00666,K20034 - 6.2.1.44 4.701e-269 837.0
DYD2_k127_5983385_10 OST-HTH/LOTUS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002726 323.0
DYD2_k127_5983385_11 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001732 278.0
DYD2_k127_5983385_12 Oligoketide cyclase lipid transport protein K18588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001122 244.0
DYD2_k127_5983385_13 PAS domain - - - 0.000000000000000000000000000000000000000002936 162.0
DYD2_k127_5983385_14 - - - - 0.00000000000000000000000000000000000000001031 159.0
DYD2_k127_5983385_15 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.000000000000000000000000000000000000002548 148.0
DYD2_k127_5983385_16 Ferredoxin K04755 - - 0.0000000000000000000000000000000000000138 150.0
DYD2_k127_5983385_17 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation K13598 - 2.7.13.3 0.0000000000000000000000000000000000005819 144.0
DYD2_k127_5983385_18 EF hand - - - 0.00000000000000000000000000005187 126.0
DYD2_k127_5983385_19 Belongs to the CinA family K03743 - 3.5.1.42 0.000000000000000000000000001477 119.0
DYD2_k127_5983385_2 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 7.629e-224 705.0
DYD2_k127_5983385_21 Domain of unknown function (DUF1905) - - - 0.0000000000000000000005569 99.0
DYD2_k127_5983385_3 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007061 543.0
DYD2_k127_5983385_4 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005152 544.0
DYD2_k127_5983385_5 Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl- D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2- phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4- cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF) K12506 - 2.7.7.60,4.6.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008601 499.0
DYD2_k127_5983385_6 overlaps another CDS with the same product name K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007581 468.0
DYD2_k127_5983385_7 Alpha Beta K07018 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000549 420.0
DYD2_k127_5983385_8 Threonine dehydratase K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 421.0
DYD2_k127_5983385_9 overlaps another CDS with the same product name K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005399 408.0
DYD2_k127_6005454_0 protein conserved in bacteria - - - 3.613e-241 760.0
DYD2_k127_6005454_1 of ABC transporters with duplicated ATPase K15738 - - 2.6e-235 736.0
DYD2_k127_6005454_2 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02481 - - 5.944e-215 691.0
DYD2_k127_6005454_3 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001653 379.0
DYD2_k127_6005454_4 - - - - 0.000078 52.0
DYD2_k127_6022679_0 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 0.0 1107.0
DYD2_k127_6022679_1 acyl-CoA dehydrogenase - - - 5.173e-293 911.0
DYD2_k127_6022679_10 COG0477 Permeases of the major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 533.0
DYD2_k127_6022679_11 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005362 526.0
DYD2_k127_6022679_12 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002368 532.0
DYD2_k127_6022679_13 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 481.0
DYD2_k127_6022679_14 Belongs to the 'phage' integrase family K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003733 410.0
DYD2_k127_6022679_15 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K11206 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004261 385.0
DYD2_k127_6022679_16 FAD-NAD(P)-binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001756 375.0
DYD2_k127_6022679_17 COG1013 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductases, beta subunit K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005196 355.0
DYD2_k127_6022679_18 GTP cyclohydrolase K01495 - 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 363.0
DYD2_k127_6022679_19 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003179 316.0
DYD2_k127_6022679_2 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 7.568e-252 783.0
DYD2_k127_6022679_20 Belongs to the MIP aquaporin (TC 1.A.8) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001424 294.0
DYD2_k127_6022679_21 Competence protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000009711 254.0
DYD2_k127_6022679_22 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000103 247.0
DYD2_k127_6022679_23 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001713 246.0
DYD2_k127_6022679_24 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.000000000000000000000000000000000000000000000000000000000000000002647 233.0
DYD2_k127_6022679_25 - - - - 0.00000000000000000000000000000000000000000000000000000001213 207.0
DYD2_k127_6022679_26 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000001097 204.0
DYD2_k127_6022679_27 COG1013 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductases, beta subunit K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000003617 205.0
DYD2_k127_6022679_28 Colicin V production protein K03558 - - 0.000000000000000000000000000000000000000000000000000001019 198.0
DYD2_k127_6022679_29 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. - - - 0.000000000000000000000000000000000000000000000009058 178.0
DYD2_k127_6022679_3 receptor - - - 1.917e-229 729.0
DYD2_k127_6022679_30 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.0000000000000000000000000000000000000000000001786 169.0
DYD2_k127_6022679_31 - - - - 0.000000000000000000000000000000000000000003658 161.0
DYD2_k127_6022679_32 Transcriptional regulator - - - 0.00000000000000000000000000000000000000001385 156.0
DYD2_k127_6022679_33 protein conserved in bacteria - - - 0.000000000000000000000000000000000000001345 153.0
DYD2_k127_6022679_34 Methyltransferase type 11 - - - 0.00000000000000000000000000000000004855 151.0
DYD2_k127_6022679_35 NifU homolog involved in Fe-S cluster formation - - - 0.00000000000000000000000000000003218 134.0
DYD2_k127_6022679_36 Small integral membrane protein - - - 0.0000000000000000000000000000006364 128.0
DYD2_k127_6022679_37 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.0000000000000000000000000000009001 123.0
DYD2_k127_6022679_38 PAS domain - - - 0.000000000000000000000000000001286 137.0
DYD2_k127_6022679_4 Bacterial protein of unknown function (DUF885) - - - 2.77e-224 708.0
DYD2_k127_6022679_41 COG3668 Plasmid stabilization system protein - - - 0.000000000000000000191 103.0
DYD2_k127_6022679_42 - - - - 0.000000000000000102 87.0
DYD2_k127_6022679_43 Domain of unknown function (DUF4402) - - - 0.000000000001079 75.0
DYD2_k127_6022679_46 peptidyl-tyrosine sulfation - - - 0.00001003 54.0
DYD2_k127_6022679_47 PilZ domain - - - 0.00001485 55.0
DYD2_k127_6022679_5 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 1.948e-223 700.0
DYD2_k127_6022679_6 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455,K11747 - - 5.189e-213 681.0
DYD2_k127_6022679_7 peptidase M48, Ste24p - - - 3.005e-203 644.0
DYD2_k127_6022679_8 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007541 591.0
DYD2_k127_6022679_9 synthase K00574 - 2.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001679 537.0
DYD2_k127_6040246_0 Transposase DDE domain K07487 - - 1.34e-236 739.0
DYD2_k127_6040246_1 Short-chain dehydrogenase reductase SDR K13775 - - 0.00000000000000000000000000000000000000000007361 161.0
DYD2_k127_6040246_2 transport system periplasmic component K01989 - - 0.0000006305 55.0
DYD2_k127_6077057_0 membrane - - - 0.0 1129.0
DYD2_k127_6077057_1 nucleoside K03317 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002242 581.0
DYD2_k127_6077057_11 LytTr DNA-binding domain - - - 0.00000000000000000000000000000000000001065 158.0
DYD2_k127_6077057_12 S1/P1 Nuclease - - - 0.00000000000000000000000000007657 118.0
DYD2_k127_6077057_13 transferase activity, transferring glycosyl groups - - - 0.00006513 47.0
DYD2_k127_6077057_2 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005903 458.0
DYD2_k127_6077057_3 Carbohydrate kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009907 422.0
DYD2_k127_6077057_4 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000869 432.0
DYD2_k127_6077057_5 Belongs to the iron ascorbate-dependent oxidoreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006249 409.0
DYD2_k127_6077057_6 N-formylglutamate amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 317.0
DYD2_k127_6077057_7 Belongs to the LOG family K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001558 292.0
DYD2_k127_6077057_8 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002544 286.0
DYD2_k127_6077057_9 This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis K01489 - 3.5.4.5 0.00000000000000000000000000000000000000000000000000000004803 205.0
DYD2_k127_6130629_0 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 2.242e-296 925.0
DYD2_k127_6130629_1 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 1.321e-239 745.0
DYD2_k127_6130629_10 Subtilase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000925 333.0
DYD2_k127_6130629_11 photosynthesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002398 306.0
DYD2_k127_6130629_12 protein conserved in bacteria K09973 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004523 320.0
DYD2_k127_6130629_13 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002065 303.0
DYD2_k127_6130629_14 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006373 290.0
DYD2_k127_6130629_15 coproporphyrinogen III oxidase K00228 - 1.3.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000514 258.0
DYD2_k127_6130629_16 protein conserved in bacteria K09973 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007136 256.0
DYD2_k127_6130629_17 dehydratase - - - 0.000000000000000000000000000000000000000000000000000000004582 204.0
DYD2_k127_6130629_18 protein conserved in bacteria K09973 - - 0.000000000000000000000000000000000000000000000000000005057 199.0
DYD2_k127_6130629_19 - - - - 0.0000000000000000000000000000001629 128.0
DYD2_k127_6130629_2 Sulfotransferase - - - 6.286e-217 684.0
DYD2_k127_6130629_20 Acid phosphatase homologues K19302 - 3.6.1.27 0.000000000000000000000000000002049 128.0
DYD2_k127_6130629_21 Transcriptional regulator K07729 - - 0.00000000000000000000000000004271 117.0
DYD2_k127_6130629_23 - - - - 0.0000000000000000001171 100.0
DYD2_k127_6130629_24 - - - - 0.00000006283 61.0
DYD2_k127_6130629_3 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 592.0
DYD2_k127_6130629_4 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009648 517.0
DYD2_k127_6130629_5 TonB-dependent Receptor Plug Domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 517.0
DYD2_k127_6130629_6 TonB-dependent Receptor Plug Domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004256 503.0
DYD2_k127_6130629_7 Cytochrome c1 K00413 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002262 402.0
DYD2_k127_6130629_8 Belongs to the GST superfamily K11209 GO:0003674,GO:0003824,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0015036,GO:0016491,GO:0016667,GO:0050896,GO:0055114 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009033 351.0
DYD2_k127_6130629_9 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 329.0
DYD2_k127_6262905_0 FAD binding domain - - - 2.377e-230 723.0
DYD2_k127_6262905_1 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain K03974 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004967 520.0
DYD2_k127_6262905_10 DnaJ molecular chaperone homology domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006907 247.0
DYD2_k127_6262905_11 probably involved in intracellular septation K06190 - - 0.0000000000000000000000000000000000000000000000000000000000000001128 228.0
DYD2_k127_6262905_12 protein, possibly involved in aromatic compounds catabolism - - - 0.000000000000000000000000000000000000000000000000000000000003063 215.0
DYD2_k127_6262905_13 SufE protein probably involved in Fe-S center assembly K02426 - - 0.00000000000000000000000000000000000000000000000000000000000742 214.0
DYD2_k127_6262905_14 - - - - 0.0000000000000000000000000000000000000000000000001313 188.0
DYD2_k127_6262905_15 PspC domain K03973 - - 0.0000000000000000000000000000000000000000000005419 169.0
DYD2_k127_6262905_16 Tetratricopeptide repeats - - - 0.00000000000000000000000000000000000003604 150.0
DYD2_k127_6262905_17 - - - - 0.000000000000000000000000000000000007944 138.0
DYD2_k127_6262905_18 Phage shock protein B K03970 - - 0.0000000000000000000000000000006629 124.0
DYD2_k127_6262905_2 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000327 509.0
DYD2_k127_6262905_20 - - - - 0.000000000155 67.0
DYD2_k127_6262905_22 - - - - 0.00000511 51.0
DYD2_k127_6262905_3 ABC transporter, ATP-binding protein K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 455.0
DYD2_k127_6262905_4 Transport permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000143 406.0
DYD2_k127_6262905_5 2-methylthioadenine K18707 - 2.8.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006079 377.0
DYD2_k127_6262905_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000093 380.0
DYD2_k127_6262905_7 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009946 315.0
DYD2_k127_6262905_8 Phage shock protein A K03969 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001756 305.0
DYD2_k127_6262905_9 Urate oxidase N-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001866 249.0
DYD2_k127_6397845_0 COG1014 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductases, gamma subunit K00174 - 1.2.7.11,1.2.7.3 0.0 1049.0
DYD2_k127_6397845_1 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 1.838e-279 876.0
DYD2_k127_6397845_10 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.00000000000000000000000000000000000001598 145.0
DYD2_k127_6397845_11 - - - - 0.000000000000000000000001372 105.0
DYD2_k127_6397845_12 Cold-shock protein K03704 - - 0.00000000000000000000000141 108.0
DYD2_k127_6397845_13 - - - - 0.000000000000000005527 87.0
DYD2_k127_6397845_16 - - - - 0.000001328 51.0
DYD2_k127_6397845_18 PilZ domain - - - 0.0000644 49.0
DYD2_k127_6397845_19 - - - - 0.0001125 48.0
DYD2_k127_6397845_2 COG0457 FOG TPR repeat - - - 7.999e-211 668.0
DYD2_k127_6397845_3 Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)-succinylornithine, ammonia and CO(2) K01484 - 3.5.3.23 6.686e-197 628.0
DYD2_k127_6397845_4 arginine N-succinyltransferase K00673 - 2.3.1.109 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004871 531.0
DYD2_k127_6397845_5 COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related deacylases K01295 - 3.4.17.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008352 529.0
DYD2_k127_6397845_6 exopolyphosphatase K01524 - 3.6.1.11,3.6.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000305 419.0
DYD2_k127_6397845_7 COG1226 Kef-type K transport systems K10716 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001872 387.0
DYD2_k127_6397845_8 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004411 263.0
DYD2_k127_6397845_9 COG1013 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductases, beta subunit K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000004402 246.0
DYD2_k127_6425288_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002371 255.0
DYD2_k127_6425288_1 MotA/TolQ/ExbB proton channel family - - - 0.0000000000000000000000000000000000000000003983 168.0
DYD2_k127_6425288_2 - - - - 0.0000001043 56.0
DYD2_k127_6457792_0 aminopeptidase N K01256 - 3.4.11.2 0.0 1127.0
DYD2_k127_6457792_1 peptidase S9 K01354 - 3.4.21.83 0.0 1036.0
DYD2_k127_6457792_10 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000304 371.0
DYD2_k127_6457792_11 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005328 365.0
DYD2_k127_6457792_12 haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000242 346.0
DYD2_k127_6457792_13 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 349.0
DYD2_k127_6457792_14 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 319.0
DYD2_k127_6457792_15 MobA-like NTP transferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002911 295.0
DYD2_k127_6457792_16 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003113 288.0
DYD2_k127_6457792_17 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008601 282.0
DYD2_k127_6457792_18 OsmC-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009864 267.0
DYD2_k127_6457792_19 cAMP biosynthetic process - - - 0.000000000000000000000000000000000000000000000000000000000002664 232.0
DYD2_k127_6457792_2 aminopeptidase K01262 - 3.4.11.9 3.379e-299 926.0
DYD2_k127_6457792_20 thioesterase K07107 - - 0.000000000000000000000000000000000000000000000000000000000547 208.0
DYD2_k127_6457792_21 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000318 186.0
DYD2_k127_6457792_22 transport system auxiliary component K18480 - - 0.00000000000000000000000000000000000000000000000002947 185.0
DYD2_k127_6457792_23 Domain of unknown function (DUF4440) - - - 0.000000000000000000000000000000000000000000001264 169.0
DYD2_k127_6457792_24 nuclease - - - 0.00000000000000000000000000000000000004826 151.0
DYD2_k127_6457792_25 Prokaryotic dksA/traR C4-type zinc finger - - - 0.000000000000000000000000000000000001886 141.0
DYD2_k127_6457792_26 Catalyzes the circularization of gamma-N-acetyl- alpha,gamma-diaminobutyric acid (ADABA) to ectoine (1,4,5,6- tetrahydro-2-methyl-4-pyrimidine carboxylic acid), which is an excellent osmoprotectant K06720 - 4.2.1.108 0.00000000000000000000000000006367 119.0
DYD2_k127_6457792_27 nuclease - - - 0.00000000000000000000001172 108.0
DYD2_k127_6457792_3 Catalyzes the formation of methanethiol and 2-ocobutanoate from L-methionine K01761 - 4.4.1.11 1.102e-231 726.0
DYD2_k127_6457792_30 AAA ATPase domain - - - 0.00000000000002039 87.0
DYD2_k127_6457792_32 - - - - 0.0006693 43.0
DYD2_k127_6457792_4 ABC-type transport system involved in resistance to organic solvents, permease component K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 533.0
DYD2_k127_6457792_5 Threonine aldolase K01620 - 4.1.2.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008806 480.0
DYD2_k127_6457792_6 Belongs to the CDP-alcohol phosphatidyltransferase class-I family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001953 463.0
DYD2_k127_6457792_7 ABC-type transport system involved in resistance to organic solvents, periplasmic component K02067 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005777 441.0
DYD2_k127_6457792_8 Polyphosphate kinase 2 (PPK2) K22468 - 2.7.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004414 407.0
DYD2_k127_6457792_9 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006495 419.0
DYD2_k127_6460961_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.0 1064.0
DYD2_k127_6460961_1 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 2.313e-320 986.0
DYD2_k127_6460961_10 The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis K00758 - 2.4.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000538 540.0
DYD2_k127_6460961_11 Amino-transferase class IV K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003052 485.0
DYD2_k127_6460961_12 Phosphoribosyl transferase domain K07100 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001694 471.0
DYD2_k127_6460961_13 HlyD family secretion protein K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 432.0
DYD2_k127_6460961_14 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001818 359.0
DYD2_k127_6460961_15 Pseudouridine synthase K06177 - 5.4.99.28,5.4.99.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005282 335.0
DYD2_k127_6460961_16 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004111 277.0
DYD2_k127_6460961_17 GAF domain-containing protein K08968 - 1.8.4.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001309 274.0
DYD2_k127_6460961_18 Branched-chain amino acid aminotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000188 290.0
DYD2_k127_6460961_19 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000182 270.0
DYD2_k127_6460961_2 COG0577 ABC-type antimicrobial peptide transport system permease component K02004 - - 7.856e-285 895.0
DYD2_k127_6460961_20 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004311 251.0
DYD2_k127_6460961_21 Cupin domain - - - 0.00000000000000000000000000000000000000000000000000000000000002396 216.0
DYD2_k127_6460961_22 Universal stress protein - - - 0.00000000000000000000000000000000000000000000000000000000004014 210.0
DYD2_k127_6460961_23 - - - - 0.0000000000000000000000000000000000000000000000000004581 194.0
DYD2_k127_6460961_24 chain release factor K15034 - - 0.00000000000000000000000000000000000000000001823 165.0
DYD2_k127_6460961_25 acyl-CoA thioester hydrolase K10806 - - 0.00000000000000000000000000000000000000003905 154.0
DYD2_k127_6460961_26 Protein of unknown function (DUF3140) - - - 0.0000000000000000000000000000000000000002372 152.0
DYD2_k127_6460961_27 Putative peptidoglycan binding domain - - - 0.000000000000000000000000000000000000001233 154.0
DYD2_k127_6460961_28 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.00000000000000000000000000000000001071 147.0
DYD2_k127_6460961_29 Pfam Secreted repeat of - - - 0.00000000000000000000000000001801 123.0
DYD2_k127_6460961_3 COG0474 Cation transport ATPase K01537 - 3.6.3.8 8.245e-258 822.0
DYD2_k127_6460961_30 Pfam:Pyridox_oxidase - - - 0.0000000000000000000000000003838 119.0
DYD2_k127_6460961_31 PFAM PRC-barrel domain - - - 0.000000000000000000000000493 111.0
DYD2_k127_6460961_32 Periplasmic Protein - - - 0.00000002481 63.0
DYD2_k127_6460961_33 Peroxiredoxin K03564 - 1.11.1.15 0.0002803 51.0
DYD2_k127_6460961_4 COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes K00382 - 1.8.1.4 5.069e-243 757.0
DYD2_k127_6460961_5 COG1228 Imidazolonepropionase and related amidohydrolases - - - 2.012e-207 655.0
DYD2_k127_6460961_6 Beta-Casp domain K07576 - - 7.767e-196 621.0
DYD2_k127_6460961_7 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002475 579.0
DYD2_k127_6460961_8 COG1228 Imidazolonepropionase and related amidohydrolases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 556.0
DYD2_k127_6460961_9 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004638 551.0
DYD2_k127_6475519_0 HTH-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 321.0
DYD2_k127_6475519_1 transposase activity K07483 - - 0.0000000000000000000008442 98.0
DYD2_k127_6485240_0 helicase K03724 - - 0.0 1203.0
DYD2_k127_6485240_1 phosphomannomutase K01840 - 5.4.2.8 8.697e-229 715.0
DYD2_k127_6485240_10 uracil-DNA glycosylase - - - 0.00000000000000000000000000000000000000000000000002947 185.0
DYD2_k127_6485240_11 transcriptional - - - 0.0000000000000000000000000000000000000000000000001322 184.0
DYD2_k127_6485240_12 - - - - 0.000000000000000000000000000000000000000000000001067 178.0
DYD2_k127_6485240_13 FOG TPR repeat, SEL1 subfamily K07126 - - 0.0000000000000000000000000000000000000000001443 161.0
DYD2_k127_6485240_14 Conserved TM helix - - - 0.000000000000000000000000000000000000003235 150.0
DYD2_k127_6485240_16 - - - - 0.000000000000000000000000000000000001385 145.0
DYD2_k127_6485240_17 Belongs to the ompA family K03640 - - 0.0000000000000000000000000011 115.0
DYD2_k127_6485240_18 - - - - 0.00000000000000003927 85.0
DYD2_k127_6485240_19 Cellulase N-terminal ig-like domain - - - 0.000008418 55.0
DYD2_k127_6485240_2 ATPase related to the helicase subunit of the Holliday junction resolvase K07478 - - 9.734e-217 679.0
DYD2_k127_6485240_3 Peptidase dimerisation domain - - - 8.136e-209 659.0
DYD2_k127_6485240_4 exonuclease of the beta-lactamase fold involved in RNA processing K07577 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002296 569.0
DYD2_k127_6485240_5 Glycosyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004507 561.0
DYD2_k127_6485240_6 involved in chromosome partitioning K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008322 390.0
DYD2_k127_6485240_7 ICC-like phosphoesterases K06953 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005582 338.0
DYD2_k127_6485240_8 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006798 341.0
DYD2_k127_6485240_9 Prolyl 4-hydroxylase alpha subunit homologues. K00472 - 1.14.11.2 0.000000000000000000000000000000000000000000000000000000000000000001558 238.0
DYD2_k127_6510807_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 9.004e-242 754.0
DYD2_k127_6510807_1 Thioredoxin reductase K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002008 427.0
DYD2_k127_6510807_2 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004878 415.0
DYD2_k127_6510807_3 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000067 361.0
DYD2_k127_6510807_4 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.000000000000000000000000000000000000000000000000000000000000000269 223.0
DYD2_k127_6510807_5 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.00000000000000000000000000000000000000000000000000001177 207.0
DYD2_k127_6510807_6 - - - - 0.00000000000000000000000000000003071 131.0
DYD2_k127_6510807_7 2-methylthioadenine K18707 - 2.8.4.5 0.000000000000000000000000001559 113.0
DYD2_k127_6517773_0 MTH538 TIR-like domain (DUF1863) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 357.0
DYD2_k127_6517773_1 COG3243 Poly(3-hydroxyalkanoate) synthetase K03821 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002999 301.0
DYD2_k127_6517773_2 synthesis repressor PhaR - - - 0.000000000000000000000000000000000000000000000000000000000003032 216.0
DYD2_k127_6517773_3 ABC-type multidrug transport system, ATPase and permease K06147 - - 0.000000000000000000000000000000000000000000000000000000001649 201.0
DYD2_k127_6517773_5 - - - - 0.000000000000000001748 92.0
DYD2_k127_6522109_0 Respiratory nitrate reductase alpha N-terminal - - - 0.0 2404.0
DYD2_k127_6522109_1 Efflux pump membrane transporter - - - 0.0 1624.0
DYD2_k127_6522109_10 Flavin-binding monooxygenase-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005285 588.0
DYD2_k127_6522109_11 3-beta hydroxysteroid dehydrogenase/isomerase family K08678 - 4.1.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001818 544.0
DYD2_k127_6522109_12 COG0659 Sulfate permease and related transporters (MFS superfamily K03321 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007872 519.0
DYD2_k127_6522109_13 NnrS protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 516.0
DYD2_k127_6522109_14 PFAM Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004558 511.0
DYD2_k127_6522109_15 Acyl-CoA dehydrogenase, N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005247 497.0
DYD2_k127_6522109_16 COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 485.0
DYD2_k127_6522109_17 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000157 477.0
DYD2_k127_6522109_18 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001928 470.0
DYD2_k127_6522109_19 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003909 477.0
DYD2_k127_6522109_2 Major Facilitator Superfamily - - - 0.0 1515.0
DYD2_k127_6522109_20 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005948 440.0
DYD2_k127_6522109_21 Nitrate reductase gamma subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002503 431.0
DYD2_k127_6522109_22 PPIC-type PPIASE domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000219 419.0
DYD2_k127_6522109_23 MoeA N-terminal region (domain I and II) K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003681 412.0
DYD2_k127_6522109_24 exodeoxyribonuclease III K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004092 401.0
DYD2_k127_6522109_25 Short-chain dehydrogenase reductase sdr - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003416 336.0
DYD2_k127_6522109_26 May be involved in the biosynthesis of molybdopterin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009802 297.0
DYD2_k127_6522109_27 Nitrate reductase delta subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008149 291.0
DYD2_k127_6522109_28 Phage shock protein A K03969 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000152 282.0
DYD2_k127_6522109_29 isomerase K01809 - 5.3.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008284 280.0
DYD2_k127_6522109_3 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 - 1.17.4.1 0.0 1153.0
DYD2_k127_6522109_30 TetR family transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005217 269.0
DYD2_k127_6522109_31 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004752 248.0
DYD2_k127_6522109_32 PFAM glycosyltransferase sugar-binding region containing DXD motif - - - 0.000000000000000000000000000000000000000000000000000000000000008804 226.0
DYD2_k127_6522109_33 Putative Flp pilus-assembly TadE/G-like - - - 0.00000000000000000000000000000000000000000000000000000000000003039 230.0
DYD2_k127_6522109_34 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000000000000001611 213.0
DYD2_k127_6522109_35 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.00000000000000000000000000000000000000000000000000000000003436 209.0
DYD2_k127_6522109_36 CRP FNR family K01420 - - 0.0000000000000000000000000000000000000000000000000000001248 203.0
DYD2_k127_6522109_37 COG3773 Cell wall hydrolyses involved in spore germination K01449 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000165 190.0
DYD2_k127_6522109_38 EVE domain - - - 0.000000000000000000000000000000000000000000000003612 175.0
DYD2_k127_6522109_39 Molybdopterin converting factor K03635 - 2.8.1.12 0.000000000000000000000000000000000000000000000003934 177.0
DYD2_k127_6522109_4 Belongs to the enoyl-CoA hydratase isomerase family K07516 - 1.1.1.35 0.0 1069.0
DYD2_k127_6522109_40 PEP-CTERM motif - - - 0.0000000000000000000000000000000000000000000006277 172.0
DYD2_k127_6522109_41 protein, possibly involved in aromatic compounds catabolism - - - 0.0000000000000000000000000000000000000000000006758 168.0
DYD2_k127_6522109_42 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.0000000000000000000000000000000000000000001417 172.0
DYD2_k127_6522109_43 Protein of unknown function (DUF3297) - - - 0.0000000000000000000000000000000001633 134.0
DYD2_k127_6522109_44 Domain of unknown function (DUF1996) - - - 0.0000000000000000000000000000000002184 133.0
DYD2_k127_6522109_46 Periplasmic Protein - - - 0.000000000000000000000000000000002829 135.0
DYD2_k127_6522109_47 - - - - 0.00000000000000000000007129 104.0
DYD2_k127_6522109_48 - - - - 0.000000000000000000000733 96.0
DYD2_k127_6522109_49 positive regulation of macromolecule biosynthetic process K03973 - - 0.0000000000000000001545 97.0
DYD2_k127_6522109_5 Respiratory nitrate reductase beta C-terminal - - - 6.74e-317 985.0
DYD2_k127_6522109_50 - - - - 0.00000000000000008424 86.0
DYD2_k127_6522109_51 - - - - 0.0000000000000001257 82.0
DYD2_k127_6522109_53 ThiS family - - - 0.000000000009747 68.0
DYD2_k127_6522109_56 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000161 56.0
DYD2_k127_6522109_6 GTP-binding protein TypA K06207 - - 5.572e-312 967.0
DYD2_k127_6522109_7 receptor K02014 - - 1.17e-247 783.0
DYD2_k127_6522109_8 acyl-CoA dehydrogenase K00249 - 1.3.8.7 2.065e-224 702.0
DYD2_k127_6522109_9 Acyl-CoA dehydrogenase, middle domain - - - 8.19e-208 651.0
DYD2_k127_6523151_0 Sigma factor PP2C-like phosphatases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001743 524.0
DYD2_k127_6523151_1 OmpA family - - - 0.000000000000000000000000000000000001906 147.0
DYD2_k127_6523151_2 FecR protein - - - 0.00000000000000000001318 91.0
DYD2_k127_6540972_0 single-stranded-DNA-specific exonuclease RecJ K07462 - - 6.716e-246 781.0
DYD2_k127_6540972_1 Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily K00121 - 1.1.1.1,1.1.1.284 2.969e-226 704.0
DYD2_k127_6540972_10 COG0330 Membrane protease subunits, stomatin prohibitin homologs - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009388 400.0
DYD2_k127_6540972_11 transcriptional regulatory protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008141 398.0
DYD2_k127_6540972_12 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006192 385.0
DYD2_k127_6540972_13 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 383.0
DYD2_k127_6540972_14 Phosphoglycerate mutase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 371.0
DYD2_k127_6540972_15 Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758 - 4.2.1.136 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005594 294.0
DYD2_k127_6540972_16 Domain of unknown function (DUF4010) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005852 292.0
DYD2_k127_6540972_17 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000003692 251.0
DYD2_k127_6540972_18 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.000000000000000000000000000000000000000000000000000000000000000000002289 238.0
DYD2_k127_6540972_19 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000003279 243.0
DYD2_k127_6540972_2 acetyl propionyl-CoA carboxylase, alpha subunit K01965 - 6.4.1.3 1.729e-217 683.0
DYD2_k127_6540972_20 COG0346 Lactoylglutathione lyase and related lyases - - - 0.000000000000000000000000000000000000000000003442 167.0
DYD2_k127_6540972_21 Endoribonuclease L-PSP - - - 0.000000000000000000000000000000000000000000003599 167.0
DYD2_k127_6540972_22 Bacterial PH domain - - - 0.000000000000000000000000000000000000000000007698 168.0
DYD2_k127_6540972_23 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000000000000000000000001232 168.0
DYD2_k127_6540972_24 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000000000000000000000002978 141.0
DYD2_k127_6540972_25 Belongs to the UPF0335 family - - - 0.0000000000000000000000000000000004743 132.0
DYD2_k127_6540972_26 PFAM phospholipase Carboxylesterase - - - 0.0000000000000000000000000000000006658 139.0
DYD2_k127_6540972_28 - - - - 0.000007835 51.0
DYD2_k127_6540972_3 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 4.876e-211 666.0
DYD2_k127_6540972_4 AMP-binding enzyme C-terminal domain K08295 - 6.2.1.32 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004202 556.0
DYD2_k127_6540972_5 NfeD-like C-terminal, partner-binding K07403 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000472 480.0
DYD2_k127_6540972_6 Serine hydrolase involved in the detoxification of formaldehyde K01070 - 3.1.2.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 459.0
DYD2_k127_6540972_7 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005598 445.0
DYD2_k127_6540972_8 TIGRFAM type I secretion membrane fusion protein, HlyD family K02022 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002085 441.0
DYD2_k127_6540972_9 Bacterial PH domain K08981 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001986 424.0
DYD2_k127_6577128_0 NADH-quinone oxidoreductase K00336 - 1.6.5.3 0.0 1096.0
DYD2_k127_6577128_1 NADH ubiquinone oxidoreductase subunit K00341 - 1.6.5.3 0.0 1092.0
DYD2_k127_6577128_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001919 319.0
DYD2_k127_6577128_11 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000413 263.0
DYD2_k127_6577128_12 biotin lipoate A B protein ligase K03524 - 6.3.4.15 0.0000000000000000000000000000000000000000000000000001277 195.0
DYD2_k127_6577128_13 Dopa 4,5-dioxygenase family K10253 - - 0.0000000000000000000000000000000000000000000001068 171.0
DYD2_k127_6577128_14 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.00000000000000000000000000000000000000007954 153.0
DYD2_k127_6577128_15 Protein of unknown function (DUF1467) - - - 0.00000000000000000000000006793 114.0
DYD2_k127_6577128_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 4.598e-262 816.0
DYD2_k127_6577128_3 NADH ubiquinone oxidoreductase subunit K00342 - 1.6.5.3 1.284e-242 760.0
DYD2_k127_6577128_4 metallo-beta-lactamase K12574 - - 2.582e-242 758.0
DYD2_k127_6577128_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 1.625e-200 634.0
DYD2_k127_6577128_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007089 603.0
DYD2_k127_6577128_7 domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002655 554.0
DYD2_k127_6577128_8 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004637 407.0
DYD2_k127_6577128_9 NADH dehydrogenase K00334 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000958 358.0
DYD2_k127_6594936_0 DNA polymerase K02337 - 2.7.7.7 0.0 1622.0
DYD2_k127_6594936_1 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0 1386.0
DYD2_k127_6594936_10 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 - 6.1.1.15 4.863e-229 715.0
DYD2_k127_6594936_11 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 2.463e-224 717.0
DYD2_k127_6594936_12 acyl-CoA dehydrogenase K00252 - 1.3.8.6 2.796e-213 668.0
DYD2_k127_6594936_13 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 6.132e-202 632.0
DYD2_k127_6594936_14 ABC-type transport system, involved in lipoprotein release, permease component K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000938 612.0
DYD2_k127_6594936_15 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001174 603.0
DYD2_k127_6594936_16 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005235 582.0
DYD2_k127_6594936_17 FAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003878 574.0
DYD2_k127_6594936_18 receptor K16092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008082 584.0
DYD2_k127_6594936_19 Predicted membrane protein (DUF2207) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002074 547.0
DYD2_k127_6594936_2 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.0 1156.0
DYD2_k127_6594936_20 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004774 473.0
DYD2_k127_6594936_21 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 457.0
DYD2_k127_6594936_22 zinc metalloprotease K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004567 460.0
DYD2_k127_6594936_23 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006901 445.0
DYD2_k127_6594936_24 Lytic murein transglycosylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004182 428.0
DYD2_k127_6594936_25 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005258 409.0
DYD2_k127_6594936_26 LuxR family transcriptional regulator K03424 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001261 385.0
DYD2_k127_6594936_27 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000753 376.0
DYD2_k127_6594936_28 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009016 366.0
DYD2_k127_6594936_29 DNA polymerase K02341 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008354 363.0
DYD2_k127_6594936_3 Transport of potassium into the cell K03549 - - 4.069e-312 967.0
DYD2_k127_6594936_30 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006641 358.0
DYD2_k127_6594936_31 Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner K09810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008159 345.0
DYD2_k127_6594936_32 COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I K06167 - 3.1.4.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003867 344.0
DYD2_k127_6594936_33 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007936 340.0
DYD2_k127_6594936_34 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 342.0
DYD2_k127_6594936_35 MazG family K04765 - 3.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 337.0
DYD2_k127_6594936_36 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002196 328.0
DYD2_k127_6594936_37 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 300.0
DYD2_k127_6594936_38 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000255 304.0
DYD2_k127_6594936_39 gag-polyprotein putative aspartyl protease K06985 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005765 257.0
DYD2_k127_6594936_4 cytochrome C K02198 - - 3.572e-262 821.0
DYD2_k127_6594936_40 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.0000000000000000000000000000000000000000000000000000000000000000000000009114 249.0
DYD2_k127_6594936_41 Belongs to the CDS family K00981 - 2.7.7.41 0.000000000000000000000000000000000000000000000000000000000000000000000005484 249.0
DYD2_k127_6594936_42 LemA family K03744 - - 0.000000000000000000000000000000000000000000000000000000000000000001856 232.0
DYD2_k127_6594936_43 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001312 225.0
DYD2_k127_6594936_44 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.000000000000000000000000000000000000000000000000000000002284 203.0
DYD2_k127_6594936_45 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.00000000000000000000000000000000000000000000000000000001105 201.0
DYD2_k127_6594936_46 Hemerythrin HHE cation binding domain - - - 0.00000000000000000000000000000000000000000000000000000004427 203.0
DYD2_k127_6594936_47 Protein of unknown function (DUF3775) - - - 0.0000000000000000000000000000000000000000000000000000000701 199.0
DYD2_k127_6594936_48 PRC-barrel domain - - - 0.00000000000000000000000000000000000000000000000000002571 193.0
DYD2_k127_6594936_49 Alkyl hydroperoxide reductase K02199 - - 0.00000000000000000000000000000000000000000000000000006276 194.0
DYD2_k127_6594936_5 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 3.198e-257 815.0
DYD2_k127_6594936_50 Glutathione-dependent formaldehyde-activating enzyme - - - 0.000000000000000000000000000000000000000000000000000227 192.0
DYD2_k127_6594936_51 2'-5' RNA ligase superfamily - - - 0.000000000000000000000000000000000000000000000000001245 192.0
DYD2_k127_6594936_52 gag-polyprotein putative aspartyl protease K06985 - - 0.00000000000000000000000000000000000000000000000002563 185.0
DYD2_k127_6594936_54 subunit of a heme lyase K02200 - - 0.0000000000000000000000000000000000000000000001533 171.0
DYD2_k127_6594936_55 ABC-type Fe3 -hydroxamate transport system, periplasmic component - - - 0.000000000000000000000000000000000000000000005629 174.0
DYD2_k127_6594936_56 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000002086 159.0
DYD2_k127_6594936_57 Outer membrane protein (OmpH-like) - - - 0.00000000000000000000000000000000000000008919 159.0
DYD2_k127_6594936_58 50S ribosomal protein L31 K02909 - - 0.000000000000000000000000000000000000003759 151.0
DYD2_k127_6594936_59 Cytochrome c biogenesis factor K02200 - - 0.0000000000000000000000000000000000007996 149.0
DYD2_k127_6594936_6 Belongs to the isocitrate and isopropylmalate dehydrogenases family K00031 - 1.1.1.42 2.108e-241 753.0
DYD2_k127_6594936_60 ABC transporter K02013 - 3.6.3.34 0.0000000000000000000000000000000001223 145.0
DYD2_k127_6594936_61 Resolvase, N terminal domain - - - 0.0000000000000358 78.0
DYD2_k127_6594936_62 - - - - 0.0000003526 53.0
DYD2_k127_6594936_7 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K13599 - - 1.067e-240 749.0
DYD2_k127_6594936_8 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 2.314e-233 730.0
DYD2_k127_6594936_9 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation K13598 - 2.7.13.3 5.7e-232 732.0
DYD2_k127_6625252_0 Ferrous iron transport protein B K04759 - - 2.405e-283 882.0
DYD2_k127_6625252_1 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916 - 6.3.1.5 1.126e-245 769.0
DYD2_k127_6625252_10 Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety K00453 GO:0003674,GO:0003824,GO:0004833,GO:0005488,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016043,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019441,GO:0019752,GO:0020037,GO:0022607,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043436,GO:0043933,GO:0044085,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046906,GO:0048037,GO:0051213,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0070189,GO:0071704,GO:0071840,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.13.11.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002787 367.0
DYD2_k127_6625252_11 Riboflavin synthase K00793 - 2.5.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002448 292.0
DYD2_k127_6625252_12 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001463 285.0
DYD2_k127_6625252_13 RpsU-divergently transcribed K18587 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004487 263.0
DYD2_k127_6625252_14 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003839 246.0
DYD2_k127_6625252_15 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.000000000000000000000000000000000000000000000000000000000000004192 226.0
DYD2_k127_6625252_16 Belongs to the SOS response-associated peptidase family - - - 0.00000000000000000000000000000000000000000000000000000000000006358 220.0
DYD2_k127_6625252_17 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.00000000000000000000000000000000000000000000000000000000007432 208.0
DYD2_k127_6625252_18 Uncharacterized ACR, COG1399 - - - 0.000000000000000000000000000000000000000000000000000002255 196.0
DYD2_k127_6625252_19 Small protein A (tmRNA-binding) - - - 0.0000000000000000000000000000000000000000000001109 173.0
DYD2_k127_6625252_2 TonB-dependent Receptor Plug Domain K02014 - - 1.17e-222 703.0
DYD2_k127_6625252_20 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0000000000000000000000000000000000000000006578 165.0
DYD2_k127_6625252_21 Ubiquinol-cytochrome C chaperone K17662 - - 0.000000000000000000000000000000000000001832 154.0
DYD2_k127_6625252_22 Fe2 transport system protein A K04758 - - 0.000000000000000000000000005858 113.0
DYD2_k127_6625252_23 - - - - 0.00000000000003314 79.0
DYD2_k127_6625252_3 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 3.052e-213 669.0
DYD2_k127_6625252_4 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002069 599.0
DYD2_k127_6625252_5 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006706 525.0
DYD2_k127_6625252_6 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001972 489.0
DYD2_k127_6625252_7 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003631 486.0
DYD2_k127_6625252_8 NADH flavin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001992 441.0
DYD2_k127_6625252_9 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004749 403.0
DYD2_k127_6669892_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 4.507e-245 762.0
DYD2_k127_6669892_1 Angiotensin-converting enzyme K01283 - 3.4.15.1 7.677e-224 703.0
DYD2_k127_6669892_2 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 1.754e-212 667.0
DYD2_k127_6669892_3 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 2.534e-212 680.0
DYD2_k127_6669892_4 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004947 309.0
DYD2_k127_6669892_5 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009106 308.0
DYD2_k127_6669892_6 Isochorismatase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001293 288.0
DYD2_k127_6669892_7 - - - - 0.00000000000000000000000000000000000000004635 164.0
DYD2_k127_6672553_0 Belongs to the ABC transporter superfamily K17325 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004079 525.0
DYD2_k127_6672553_1 Belongs to the ABC transporter superfamily K17324 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001797 460.0
DYD2_k127_6672553_2 COG1175 ABC-type sugar transport systems permease components K17322 - - 0.0000000000000000000000000000000000000000000000000000000000000000004681 229.0
DYD2_k127_66755_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0 1264.0
DYD2_k127_66755_1 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 1.996e-230 723.0
DYD2_k127_66755_10 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.0000000000000000000000000000000000000000000000000000000000000000002385 233.0
DYD2_k127_66755_11 Uncharacterized protein conserved in bacteria (DUF2171) - - - 0.00000000002644 75.0
DYD2_k127_66755_2 5-aminolevulinic acid synthase K00643 - 2.3.1.37 2.602e-226 705.0
DYD2_k127_66755_3 Rossmann fold nucleotide-binding protein involved in DNA uptake K04096 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 459.0
DYD2_k127_66755_4 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004048 362.0
DYD2_k127_66755_5 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 342.0
DYD2_k127_66755_6 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 K21029 - 2.7.7.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009819 308.0
DYD2_k127_66755_7 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 286.0
DYD2_k127_66755_8 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008266 269.0
DYD2_k127_66755_9 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000001066 260.0
DYD2_k127_78838_0 Toxic anion resistance - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002114 580.0
DYD2_k127_78838_1 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 589.0
DYD2_k127_78838_10 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001777 368.0
DYD2_k127_78838_11 enoyl-CoA hydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000438 338.0
DYD2_k127_78838_12 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004833 322.0
DYD2_k127_78838_13 Fatty acid hydroxylase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004595 317.0
DYD2_k127_78838_14 Putative Flp pilus-assembly TadE/G-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009697 319.0
DYD2_k127_78838_15 Cupin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 310.0
DYD2_k127_78838_16 UDP-N-acetylmuramate-alanine ligase K01924 - 6.3.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007596 293.0
DYD2_k127_78838_17 Methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003237 281.0
DYD2_k127_78838_18 Response regulator of the LytR AlgR family K08083 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005293 268.0
DYD2_k127_78838_19 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000001549 256.0
DYD2_k127_78838_2 Flavin containing amine oxidoreductase K00274 - 1.4.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002236 576.0
DYD2_k127_78838_20 - - - - 0.000000000000000000000000000000000000000000000000000000000000000002333 233.0
DYD2_k127_78838_21 - - - - 0.0000000000000000000000000000000000000000000000000000000000000004567 224.0
DYD2_k127_78838_22 Protein of unknown function, DUF484 K09921 - - 0.0000000000000000000000000000000000000000000000000000000000000007452 224.0
DYD2_k127_78838_23 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000001346 222.0
DYD2_k127_78838_24 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000002069 232.0
DYD2_k127_78838_25 Domain of unknown function (DUF2383) - - - 0.000000000000000000000000000000000000000000000000000109 189.0
DYD2_k127_78838_26 small integral membrane protein - - - 0.000000000000000000000000000000000000000000000000000572 186.0
DYD2_k127_78838_27 PFAM glutathione-dependent formaldehyde-activating GFA - - - 0.00000000000000000000000000000000000000000000000008867 182.0
DYD2_k127_78838_28 Endoribonuclease L-PSP - - - 0.000000000000000000000000000000000000000000000001404 181.0
DYD2_k127_78838_29 glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000001017 178.0
DYD2_k127_78838_3 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003966 480.0
DYD2_k127_78838_30 - - - - 0.0000000000000000000000000000000000000008973 152.0
DYD2_k127_78838_31 TadE-like protein - - - 0.00000000000000000002306 98.0
DYD2_k127_78838_32 TadE-like protein - - - 0.000000000000000009012 90.0
DYD2_k127_78838_33 Glycosyl transferase 4-like - - - 0.0000000000000004917 91.0
DYD2_k127_78838_35 PFAM blue (type 1) copper domain protein - - - 0.00000000000005549 77.0
DYD2_k127_78838_36 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000000000001865 78.0
DYD2_k127_78838_37 Gram-negative bacterial TonB protein C-terminal - - - 0.0000002389 62.0
DYD2_k127_78838_4 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001303 452.0
DYD2_k127_78838_5 Homocysteine S-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 412.0
DYD2_k127_78838_6 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 410.0
DYD2_k127_78838_7 Adenylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 406.0
DYD2_k127_78838_8 Adenylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009119 405.0
DYD2_k127_78838_9 Belongs to the 'phage' integrase family K03733 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 385.0
DYD2_k127_853768_0 glutamate dehydrogenase K15371 - 1.4.1.2 0.0 1641.0
DYD2_k127_853768_1 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007287 612.0
DYD2_k127_853768_10 COG0189 Glutathione synthase Ribosomal protein S6 modification enzyme (glutaminyl transferase) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006731 340.0
DYD2_k127_853768_11 Zn-dependent dipeptidase, microsomal dipeptidase K01273 - 3.4.13.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004899 338.0
DYD2_k127_853768_12 thioesterase K07107 - - 0.0000000000000000000000000000000000000000000000000000000001744 206.0
DYD2_k127_853768_13 Belongs to the ompA family K03640 - - 0.0000000000000000000000000001353 124.0
DYD2_k127_853768_14 protein related to arylsulfate sulfotransferase involved in siderophore biosynthesis - - - 0.00000000000000000006258 92.0
DYD2_k127_853768_2 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005527 604.0
DYD2_k127_853768_3 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001972 512.0
DYD2_k127_853768_4 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003032 467.0
DYD2_k127_853768_5 Protein of unknown function (DUF3089) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000999 467.0
DYD2_k127_853768_6 PAS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009916 437.0
DYD2_k127_853768_7 Acetoacetyl-CoA reductase K00023 - 1.1.1.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002686 425.0
DYD2_k127_853768_8 Involved in the TonB-independent uptake of proteins K03641 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006397 431.0
DYD2_k127_853768_9 Putative S-adenosyl-L-methionine-dependent methyltransferase K18164 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001864 377.0
DYD2_k127_87863_0 penicillin-binding protein K05366 - 2.4.1.129,3.4.16.4 5.114e-299 933.0
DYD2_k127_87863_1 usher protein - - - 1.015e-279 887.0
DYD2_k127_87863_10 Belongs to the ParB family K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000004367 243.0
DYD2_k127_87863_11 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.0000000000000000000000000000000000000000000000000000000000000000004797 236.0
DYD2_k127_87863_12 Belongs to the UPF0260 family K09160 - - 0.000000000000000000000000000000000000000000000000000000000000000001195 229.0
DYD2_k127_87863_13 membrane K08973 - - 0.000000000000000000000000000000000000000000000000000000000000000003675 228.0
DYD2_k127_87863_14 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase - - - 0.0000000000000000000000000000000000000000000000000000000000000002344 225.0
DYD2_k127_87863_15 DNA repair protein MmcB-like - - - 0.0000000000000000000000000000000000000000000000000000000000000004234 223.0
DYD2_k127_87863_16 PTS IIA-like nitrogen-regulatory protein PtsN K02806 - - 0.0000000000000000000000000000000000000000000000000000000000000009965 222.0
DYD2_k127_87863_17 Thioesterase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000007897 219.0
DYD2_k127_87863_18 COG3773 Cell wall hydrolyses involved in spore germination - - - 0.0000000000000000000000000000000000000000000000000000000000007382 217.0
DYD2_k127_87863_19 Metal-dependent hydrolase K07043 - - 0.000000000000000000000000000000000000000000000000000000000009122 216.0
DYD2_k127_87863_2 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 3.401e-246 763.0
DYD2_k127_87863_20 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000000000000000002637 191.0
DYD2_k127_87863_21 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.00000000000000000000000000000000000000000000000001042 188.0
DYD2_k127_87863_22 Ankyrin repeat - - - 0.000000000000000000000000000000000000002507 153.0
DYD2_k127_87863_23 Domain of unknown function (DUF4402) - - - 0.00000000000000000000000000000000001526 142.0
DYD2_k127_87863_24 Domain of unknown function (DUF4402) - - - 0.000000000000000000000000001908 118.0
DYD2_k127_87863_25 Protein of unknown function (DUF1491) - - - 0.000000000000000003269 88.0
DYD2_k127_87863_3 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005668 568.0
DYD2_k127_87863_4 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002448 479.0
DYD2_k127_87863_5 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005925 413.0
DYD2_k127_87863_6 Chromosome partitioning K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001914 398.0
DYD2_k127_87863_7 membrane protein, TerC - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 387.0
DYD2_k127_87863_8 COG3121 P pilus assembly protein, chaperone PapD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001308 357.0
DYD2_k127_87863_9 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004896 322.0
DYD2_k127_881445_0 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 - 6.1.1.20 0.0 1058.0
DYD2_k127_881445_1 Isocitrate lyase K01637 - 4.1.3.1 6.124e-230 717.0
DYD2_k127_881445_10 Cell division protein K09811 - - 0.0000000000000000000000000000000000000000000000006385 188.0
DYD2_k127_881445_11 zinc-ribbon domain - - - 0.000000000000000000000000000000000000000002303 168.0
DYD2_k127_881445_12 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.000000000000000000000000000000000008244 138.0
DYD2_k127_881445_14 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000009823 110.0
DYD2_k127_881445_2 Malate synthase K01637,K01638 GO:0003674,GO:0003824,GO:0004451,GO:0004474,GO:0005975,GO:0006081,GO:0006082,GO:0006097,GO:0007275,GO:0007568,GO:0008150,GO:0008152,GO:0008340,GO:0009987,GO:0010259,GO:0016740,GO:0016746,GO:0016829,GO:0016830,GO:0016833,GO:0019752,GO:0032501,GO:0032502,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0046487,GO:0046912,GO:0048856,GO:0071704 2.3.3.9,4.1.3.1 3.707e-208 660.0
DYD2_k127_881445_3 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 544.0
DYD2_k127_881445_4 IrrE N-terminal-like domain K07110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008544 464.0
DYD2_k127_881445_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000499 406.0
DYD2_k127_881445_6 cell division K09812 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004647 374.0
DYD2_k127_881445_7 Acyltransferase K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000003436 260.0
DYD2_k127_881445_8 DUF218 domain - - - 0.00000000000000000000000000000000000000000000000000000000000002601 222.0
DYD2_k127_881445_9 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.0000000000000000000000000000000000000000000000000000000000004544 212.0
DYD2_k127_884617_0 Type II/IV secretion system protein K02283 - - 1.082e-227 711.0
DYD2_k127_884617_1 Pilus formation protein N terminal region K02280 - - 1.984e-198 632.0
DYD2_k127_884617_10 Type IV pilus biogenesis stability protein PilW - - - 0.0000000000000000000000000000000000000002087 166.0
DYD2_k127_884617_11 Type IV leader peptidase family K02278 - 3.4.23.43 0.000000000000000000000000000000000005839 142.0
DYD2_k127_884617_12 TadE-like protein - - - 0.0000000000000000000000000000000001682 140.0
DYD2_k127_884617_13 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.000000000000000000001105 94.0
DYD2_k127_884617_2 Putative Flp pilus-assembly TadE/G-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004749 525.0
DYD2_k127_884617_3 Pilus assembly protein K02282 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 437.0
DYD2_k127_884617_4 Type II secretion system (T2SS), protein F K12510 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004296 396.0
DYD2_k127_884617_5 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003388 377.0
DYD2_k127_884617_6 Type II secretion system (T2SS), protein F K12511 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003759 364.0
DYD2_k127_884617_7 Flp pilus assembly protein RcpC/CpaB K02279 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005396 258.0
DYD2_k127_884617_8 Tetratricopeptide repeats - - - 0.00000000000000000000000000000000000000000000000000000000000005926 228.0
DYD2_k127_884617_9 TadE-like protein - - - 0.0000000000000000000000000000000000000000000001965 175.0
DYD2_k127_983602_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001521 417.0
DYD2_k127_983602_1 Conserved TM helix - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005766 278.0
DYD2_k127_983602_2 - - - - 0.00000000000001208 78.0
DYD2_k127_993687_0 Bacterial protein of unknown function (DUF899) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007359 255.0
DYD2_k127_993687_1 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000000000004758 142.0
DYD2_k127_993687_2 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000000000001253 133.0
DYD2_k127_993687_3 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000001731 130.0