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Overview

ID MAG00944
Name DYD3_bin.1
Sample SMP0027
Taxonomy
Kingdom Archaea
Phylum Thermoproteota
Class Nitrososphaeria
Order Nitrososphaerales
Family Nitrososphaeraceae
Genus TA-21
Species TA-21 sp025923455
Assembly information
Completeness (%) 68.74
Contamination (%) 2.49
GC content (%) 36.0
N50 (bp) 4,362
Genome size (bp) 1,655,790

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes1599

Gene name Description KEGG GOs EC E-value Score Sequence
DYD3_k127_10291_0 Sulfurtransferase K01011 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002198 331.0
DYD3_k127_10291_1 4Fe-4S binding domain K00338 - 1.6.5.3 0.00000000000000000000000000000000000000000000004625 169.0
DYD3_k127_10291_2 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.000000000000000000009139 100.0
DYD3_k127_1035973_0 COG1914 Mn2 and Fe2 transporters of the NRAMP family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001925 273.0
DYD3_k127_1035973_1 PFAM Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000002185 188.0
DYD3_k127_1035973_2 Universal stress protein - - - 0.000000000000000000000001072 108.0
DYD3_k127_1035973_3 COG1914 Mn2 and Fe2 transporters of the NRAMP family - - - 0.000000000001357 68.0
DYD3_k127_1035973_4 Protein of unknown function (DUF1059) - - - 0.000008012 50.0
DYD3_k127_1053494_0 Formyl transferase K01433 - 3.5.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002617 401.0
DYD3_k127_1053494_1 Creatinine amidohydrolase K01470 - 3.5.2.10 0.0000000000000000000000000000000000000000000000000006198 192.0
DYD3_k127_105405_0 zinc finger K03498 - - 0.000000000000000000000000000000000000000000000000000000000000000000009339 239.0
DYD3_k127_105405_1 Belongs to the eukaryotic ribosomal protein eL13 family K02873 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000418 49.0
DYD3_k127_1101715_0 zinc finger K03498 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001204 244.0
DYD3_k127_1105087_0 PFAM Alcohol dehydrogenase GroES-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 606.0
DYD3_k127_1105087_1 HpcH/HpaI aldolase/citrate lyase family K01644 - 4.1.3.34 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000355 323.0
DYD3_k127_1133780_0 Terminase-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007866 319.0
DYD3_k127_1133780_1 Tfp pilus assembly protein FimV - - - 0.0000000000000000000000000000002656 141.0
DYD3_k127_1133780_2 Patatin-like phospholipase K06900 - - 0.000000000000000000000003326 114.0
DYD3_k127_1133780_3 - - - - 0.0000000000001512 77.0
DYD3_k127_1133780_4 Chaperone of endosialidase - - - 0.000000000009129 78.0
DYD3_k127_1133780_5 RNA ligase - - - 0.0000000003129 65.0
DYD3_k127_1139109_0 nitrite reductase [NAD(P)H] activity K00158,K03809 - 1.2.3.3,1.6.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000616 436.0
DYD3_k127_1139109_1 Chloride channel K03281 - - 0.00000000000000000000000000000000000000000000000000000000001481 219.0
DYD3_k127_1139109_2 riboflavin synthase, alpha K00793 - 2.5.1.9 0.000000000000000000000000000000000000000000000000001502 188.0
DYD3_k127_1164537_0 Universal stress protein - - - 0.000000000000000000000000000000000006902 143.0
DYD3_k127_1164537_1 - - - - 0.0000000005318 65.0
DYD3_k127_1164537_2 - - - - 0.0000000405 56.0
DYD3_k127_1195325_0 Belongs to the class-I aminoacyl-tRNA synthetase family - - - 0.000000000000000000000000003539 113.0
DYD3_k127_1195325_1 CHRD domain - - - 0.0000000000001222 79.0
DYD3_k127_1196955_0 nitrite reductase [NAD(P)H] activity K00158,K00363,K03809,K05710 - 1.2.3.3,1.6.5.2,1.7.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007221 462.0
DYD3_k127_1196955_1 Belongs to the Pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003113 291.0
DYD3_k127_1196955_2 Thioredoxin K03671 - - 0.00000000000000000000000000000000000004856 145.0
DYD3_k127_1196955_3 - - - - 0.00000001254 58.0
DYD3_k127_1209581_0 Cysteine synthase K12339 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 525.0
DYD3_k127_1209581_1 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005163 511.0
DYD3_k127_1209581_2 Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur K03146 - - 0.000000000000000000001962 94.0
DYD3_k127_1209581_3 - - - - 0.00000000000000004198 87.0
DYD3_k127_1209581_4 - - - - 0.00000000001345 66.0
DYD3_k127_1209581_5 redox protein, regulator of disulfide bond formation - - - 0.0000000001312 62.0
DYD3_k127_1210092_0 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37 K01409 - 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008833 439.0
DYD3_k127_1210092_1 GTPase of unknown function C-terminal K06942 - - 0.0000000000000000000000000000000000000000000000000000000003441 205.0
DYD3_k127_1210092_2 Mn2 -dependent serine threonine protein kinase K08851 - 2.7.11.1 0.0000000000000000000000000000000000000000000000008692 183.0
DYD3_k127_1210092_3 Belongs to the HAM1 NTPase family K02428 - 3.6.1.66 0.000000000000000000000000000000000000000000002007 169.0
DYD3_k127_1210092_4 - - - - 0.000000000000000000000004834 109.0
DYD3_k127_1210092_5 - - - - 0.000000000000000000006683 96.0
DYD3_k127_1227049_0 Belongs to the enoyl-CoA hydratase isomerase family K01715,K15019 - 4.2.1.116,4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005462 434.0
DYD3_k127_1227049_1 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 399.0
DYD3_k127_1227049_2 Radical SAM K06937 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007426 347.0
DYD3_k127_1227049_3 Conserved hypothetical ATP binding protein K06883 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001914 316.0
DYD3_k127_1227049_4 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 - 2.7.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007661 306.0
DYD3_k127_1227049_5 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004462 292.0
DYD3_k127_1227049_6 - - - - 0.000000000000000000000000000000000000000000000002094 177.0
DYD3_k127_1250012_0 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03635,K03637 - 2.8.1.12,4.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 312.0
DYD3_k127_1250012_1 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03635,K21142 - 2.8.1.12 0.00000000000000000000000000006084 121.0
DYD3_k127_1250012_2 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.0000000000000000000000000004053 118.0
DYD3_k127_1250099_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000002426 66.0
DYD3_k127_1250099_1 exo-alpha-(2->6)-sialidase activity - - - 0.00000004721 63.0
DYD3_k127_1266453_0 Subtilase family - - - 0.0000000000000000000000000000000000000000000004804 183.0
DYD3_k127_1271559_0 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000796 312.0
DYD3_k127_1271559_1 CBS domain - - - 0.00000002638 66.0
DYD3_k127_1271559_2 KAP family P-loop domain - - - 0.0003507 45.0
DYD3_k127_1271559_4 Universal stress protein - - - 0.0008282 42.0
DYD3_k127_1275538_0 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000009763 202.0
DYD3_k127_1275538_1 Pyridoxamine 5'-phosphate - - - 0.0000000000000000000000000000000000000000000000000005754 188.0
DYD3_k127_1275538_2 PFAM NHL repeat containing protein - - - 0.00000000000000000000000000000000000000007583 156.0
DYD3_k127_1275538_3 RTX toxins and related Ca2 binding proteins - - - 0.00000000000000000000009298 104.0
DYD3_k127_1275538_4 - - - - 0.00000000000164 74.0
DYD3_k127_1278854_0 F420-0:Gamma-glutamyl ligase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003453 282.0
DYD3_k127_1278854_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004378 244.0
DYD3_k127_1278854_2 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000003283 135.0
DYD3_k127_1282996_0 tRNA pseudouridine synthase K06176 - 5.4.99.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005006 445.0
DYD3_k127_1282996_1 CRISPR-associated protein Cas4 K07464 - 3.1.12.1 0.00000000000000000000000000000000000000000000001648 177.0
DYD3_k127_1282996_2 - - - - 0.0000003365 59.0
DYD3_k127_1282996_3 - - - - 0.0001307 48.0
DYD3_k127_1296628_0 YjgF/chorismate_mutase-like, putative endoribonuclease - - - 0.0000000000000000000000000000000000000000000000004163 179.0
DYD3_k127_1296628_2 restriction endonuclease K07448 - - 0.00000004219 60.0
DYD3_k127_1300196_0 Sodium hydrogen exchanger K03455 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002067 480.0
DYD3_k127_1300196_1 - - - - 0.00000000000000000000000004427 118.0
DYD3_k127_1300196_2 PFAM SPFH domain Band 7 family - - - 0.0000000000000006896 78.0
DYD3_k127_1312782_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate K03330 - 6.3.5.7 3.18e-211 674.0
DYD3_k127_1312782_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003498 314.0
DYD3_k127_1312782_2 RNA methylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000916 236.0
DYD3_k127_1312782_3 Domain of unknown function (DUF309) K09763 - - 0.00000000000000000000000000000000000000000007908 166.0
DYD3_k127_1328851_0 TatD related DNase K03424 - - 0.0000000000000000000000000000000000000000000000000000000000000000006841 236.0
DYD3_k127_1328851_2 - - - - 0.000000000000000000001453 95.0
DYD3_k127_1328851_3 ribosomal protein K02962 - - 0.0000000000005972 70.0
DYD3_k127_1328851_4 Kinase binding protein CGI-121 - - - 0.000000004753 60.0
DYD3_k127_136730_0 RNA-metabolising metallo-beta-lactamase K07041 - - 0.0 1019.0
DYD3_k127_136730_1 Peptidase family M50 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006068 348.0
DYD3_k127_137140_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01870 - 6.1.1.5 1.894e-319 988.0
DYD3_k127_137140_1 AAA domain (Cdc48 subfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000191 608.0
DYD3_k127_137140_2 PFAM SPFH domain Band 7 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003761 375.0
DYD3_k127_137140_3 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000368 247.0
DYD3_k127_1380113_0 Protein of unknown function (DUF1326) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001933 328.0
DYD3_k127_1380113_1 metal-binding integral membrane protein - - - 0.00000000000000000000000000000000000000000000000000004414 191.0
DYD3_k127_1380113_2 small metal-binding protein - - - 0.0005921 45.0
DYD3_k127_138282_0 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000001208 255.0
DYD3_k127_138282_1 Iron-containing redox enzyme K06137 - 1.3.3.11 0.00000000000000000000000000000000000000000000000000000000000000000006824 237.0
DYD3_k127_1389366_0 Exchanges the guanine residue with 7-cyano-7- deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D- loop) of archaeal tRNAs K18779 - 2.4.2.48 9.975e-203 643.0
DYD3_k127_1389366_1 ThiF family K21029 - 2.7.7.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006938 298.0
DYD3_k127_1389366_2 PFAM Like-Sm ribonucleoprotein, core - - - 0.000000000000000000000000000000000000000000000000000171 188.0
DYD3_k127_1389366_3 - - - - 0.0000000000000000000000000000000001629 136.0
DYD3_k127_1389366_6 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.00000000000002974 80.0
DYD3_k127_1389366_7 Carbon-nitrogen hydrolase K11206 - - 0.000002641 51.0
DYD3_k127_1408065_1 lactoylglutathione lyase activity - - - 0.0000000000000000000000000000000000000000000003762 169.0
DYD3_k127_1408065_2 Multicopper oxidase - - - 0.00000000000000000000000000000000000000002173 160.0
DYD3_k127_1408065_3 PFAM Multicopper oxidase - - - 0.00000000000000000000000000000001342 134.0
DYD3_k127_1408065_5 3-demethylubiquinone-9 3-methyltransferase - - - 0.0000000000000000000000000000001575 124.0
DYD3_k127_1408065_6 Protein of unknown function (DUF4242) - - - 0.00000000000000000000006356 100.0
DYD3_k127_1408065_8 Belongs to the P(II) protein family K04751 - - 0.0004768 49.0
DYD3_k127_1436700_0 Thiolase, N-terminal domain K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003921 358.0
DYD3_k127_1436700_1 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002457 345.0
DYD3_k127_1436700_2 Nucleotidyl transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005799 255.0
DYD3_k127_1436700_3 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.00000000000000000000000000000000000000000000000000000000000000000001069 237.0
DYD3_k127_1436700_4 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.00000000000000000000000000000000000000000000000000000000000000000002087 233.0
DYD3_k127_1436700_5 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.00000000000000000000000000000002217 128.0
DYD3_k127_1436700_6 ribosomal protein S14 K02954 - - 0.00000000000000000000000001916 108.0
DYD3_k127_143675_0 High-affinity Fe2 Pb2 permease K07243 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001394 262.0
DYD3_k127_143675_1 PFAM Iron dependent repressor, metal binding and dimerisation domain K03709 - - 0.00000000000000000000000000000000000000000000000000000000000000000006412 233.0
DYD3_k127_143675_2 PQQ enzyme repeat - - - 0.000000000000000000000000000000000000002577 161.0
DYD3_k127_143675_3 COG2133 Glucose sorbosone dehydrogenases K21430 - - 0.0000000000000000000002352 100.0
DYD3_k127_1494944_0 COG1522 Transcriptional regulators - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001998 496.0
DYD3_k127_1494944_1 Prephenate dehydratase K04518 - 4.2.1.51 0.000000000000000000000000000000000000000000000000000000000000141 219.0
DYD3_k127_1494944_2 COG0455 ATPases involved in chromosome partitioning K03496,K03609 - - 0.00009016 44.0
DYD3_k127_1500033_0 TIGRFAM acetolactate synthase, large subunit, biosynthetic type K01652 - 2.2.1.6 1.383e-300 927.0
DYD3_k127_1500033_1 Ribose 5-phosphate isomerase K01807 - 5.3.1.6 0.00000000000000000000000000000000000000000000000000000000000007763 220.0
DYD3_k127_1500033_2 YHS domain - - - 0.00000000000000000008001 89.0
DYD3_k127_1500033_3 - - - - 0.000001704 52.0
DYD3_k127_1519368_0 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07709 - 2.7.13.3 0.0000000000000000000000000000000005807 141.0
DYD3_k127_1519368_1 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain - - - 0.0000000002019 73.0
DYD3_k127_1519368_2 biotin lipoate A B protein ligase K03524 - 6.3.4.15 0.0000001103 57.0
DYD3_k127_1527908_0 Phosphate uptake regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007472 382.0
DYD3_k127_1527908_1 PHP-associated - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003456 271.0
DYD3_k127_1527908_2 PhoU domain K02039 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000114 256.0
DYD3_k127_1531994_0 PFAM Copper binding proteins, plastocyanin azurin family - - - 0.00000000000000000000000000000000000000000000000000000007336 198.0
DYD3_k127_1531994_1 Cytochrome b subunit of the bc complex K00412 - - 0.000000000000000000000000000000000000000000000000000007759 196.0
DYD3_k127_1531994_2 - - - - 0.0000000000000000000000000001754 120.0
DYD3_k127_1531994_3 TIGRFAM phosphohistidine phosphatase SixA K08296 - - 0.000000000002195 72.0
DYD3_k127_1552815_0 3-isopropylmalate dehydratase, large subunit K01703 - 4.2.1.33,4.2.1.35 9.727e-236 736.0
DYD3_k127_1552815_1 Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation K03433 - 3.4.25.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004385 350.0
DYD3_k127_1552815_2 3-isopropylmalate dehydratase, small subunit K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000005688 248.0
DYD3_k127_1552815_3 ERCC4 domain K10848 - - 0.00000000000000000000000000000000000000000000000000000000000000000215 235.0
DYD3_k127_1552815_4 NADH ubiquinone oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000001074 218.0
DYD3_k127_1552815_5 phosphoglucomutase phosphomannomutase alpha beta alpha domain I - - - 0.0000000000000000000000000000000000000004045 154.0
DYD3_k127_1552815_6 - - - - 0.00000000000000000000000000000000000001106 144.0
DYD3_k127_1554797_0 RNA-metabolising metallo-beta-lactamase K07041 - - 2.673e-201 644.0
DYD3_k127_1554797_1 Pfam:DUF552 K09152 - - 0.00000000000000000000000000000000000547 138.0
DYD3_k127_1554797_2 Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1-phosphate (G1P). The G1P thus generated is used as the glycerophosphate backbone of phospholipids in the cellular membranes of Archaea K00096 - 1.1.1.261 0.000002746 49.0
DYD3_k127_1568456_0 synthetase (class II) K01880 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000226 355.0
DYD3_k127_1568456_1 - - - - 0.00000000000000000000002641 103.0
DYD3_k127_1568456_2 CHRD domain - - - 0.000000000000001306 84.0
DYD3_k127_1568456_3 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02472 - 1.1.1.336 0.0007844 42.0
DYD3_k127_1600410_0 COG1599 Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins K07466 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007548 323.0
DYD3_k127_1600410_1 Staphylococcal nuclease homologues - - - 0.0000000003033 70.0
DYD3_k127_1605428_0 Major Intrinsic Protein K06188 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009494 256.0
DYD3_k127_1605428_1 Methyltransferase type 11 K07755 - 2.1.1.137 0.00000000000000000000000000000000000000000001993 165.0
DYD3_k127_1605428_2 PFAM low molecular weight phosphotyrosine protein phosphatase K03741 - 1.20.4.1 0.0000000000000000000001665 99.0
DYD3_k127_1605428_3 TIGRFAM phosphodiesterase, MJ0936 family K07095 - - 0.0001697 46.0
DYD3_k127_1605428_4 PFAM low molecular weight phosphotyrosine protein phosphatase K03741 - 1.20.4.1 0.0002544 44.0
DYD3_k127_16379_0 Putative zinc- or iron-chelating domain K06940 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006368 336.0
DYD3_k127_16379_1 - - - - 0.000000000000000000000000000000000000000000000004754 175.0
DYD3_k127_16379_2 Zinc finger domain - - - 0.00000000000000000000000000000000000000007155 153.0
DYD3_k127_1738436_0 MGS-like domain K01955 - 6.3.5.5 0.0 1461.0
DYD3_k127_1738436_1 carbamoyl-phosphate synthase, small subunit K01956 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000005808 202.0
DYD3_k127_1738436_2 MGS-like domain K01955 - 6.3.5.5 0.000003899 48.0
DYD3_k127_1750259_1 CHAD - - - 0.000001054 56.0
DYD3_k127_1754834_0 Domain of unknown function (DUF4443) - - - 0.000000000000000000000000000000000000000000000000000000000000000000003731 241.0
DYD3_k127_1754834_1 elongation factor Tu - - - 0.000000000000000000000000000000000000000000000000000003275 196.0
DYD3_k127_1754834_2 Probable cobalt transporter subunit (CbtA) - - - 0.00000000000000000000000000003697 120.0
DYD3_k127_1754834_3 Probable cobalt transporter subunit (CbtB) - - - 0.0000000000000474 75.0
DYD3_k127_175896_0 small GTP-binding protein K06944 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006073 462.0
DYD3_k127_175896_1 Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002594 448.0
DYD3_k127_175896_3 Signal peptidase K13280 - 3.4.21.89 0.00000000000000000000000000000000001917 141.0
DYD3_k127_175896_4 Ribonuclease H K03469 - 3.1.26.4 0.00000000000000000003353 95.0
DYD3_k127_1794045_0 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001867 389.0
DYD3_k127_1794045_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009495 336.0
DYD3_k127_1794045_10 Belongs to the glycosyl hydrolase 5 (cellulase A) family K05991 - 3.2.1.123 0.0005282 52.0
DYD3_k127_1794045_2 transferase activity, transferring glycosyl groups K00752 - 2.4.1.212 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004953 323.0
DYD3_k127_1794045_3 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002978 277.0
DYD3_k127_1794045_4 imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000005231 244.0
DYD3_k127_1794045_5 Haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000005215 232.0
DYD3_k127_1794045_6 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.000000000000000000000000000000000000000000000000000001117 203.0
DYD3_k127_1794045_7 TIGRFAM Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 - 5.3.1.16 0.0000000000000000000000000000000000000000000000000001193 194.0
DYD3_k127_1794045_8 PFAM Aminotransferase class I and II K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000001685 173.0
DYD3_k127_1794045_9 Belongs to the class-II aminoacyl-tRNA synthetase family K01868 - 6.1.1.3 0.000000000000000000000000000000000000000373 152.0
DYD3_k127_1803493_0 Cobalt chelatase (CbiK) K06042 - 5.4.99.60,5.4.99.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000331 289.0
DYD3_k127_1803493_1 Cobalt chelatase (CbiK) K06042 - 5.4.99.60,5.4.99.61 0.000000000000000000000000000000000000000000000000000000000000000005513 232.0
DYD3_k127_1803493_2 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.000000000000000000000000000000000000000000000000000000001148 212.0
DYD3_k127_1803493_3 Cobalamin synthesis G C-terminus K02189 - 3.7.1.12 0.000000000000000000001394 96.0
DYD3_k127_1817040_0 Protein of unknown function (DUF1326) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 319.0
DYD3_k127_1817040_1 metal-binding integral membrane protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003609 306.0
DYD3_k127_1817040_2 - - - - 0.0000000007696 70.0
DYD3_k127_1826270_0 Signal transducing histidine kinase, homodimeric K03407 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000168 343.0
DYD3_k127_1826270_1 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412,K03413 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004863 289.0
DYD3_k127_1826270_2 Methylase of chemotaxis methyl-accepting K00575 - 2.1.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000007576 254.0
DYD3_k127_1826270_3 Chemotaxis protein CheC, inhibitor of MCP methylation K03410 - - 0.00000000000000000000000000000000000000000000003747 176.0
DYD3_k127_1826270_4 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.0000000000000000000000000000000000000009418 153.0
DYD3_k127_1827019_0 DNA Topoisomerase I (eukaryota) K03163 - 5.99.1.2 2.981e-224 707.0
DYD3_k127_1827019_1 membrane-associated protein domain - - - 0.00000000000000000000000000000000000000002201 168.0
DYD3_k127_1835751_0 Anticodon-binding domain of tRNA K01873 - 6.1.1.9 8.388e-312 966.0
DYD3_k127_1835751_1 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001864 501.0
DYD3_k127_1835751_2 PFAM Alcohol dehydrogenase GroES-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 344.0
DYD3_k127_1835751_3 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 295.0
DYD3_k127_1835751_4 UPF0126 domain - - - 0.000000000000000000000000000000000000000000000000000000000001535 215.0
DYD3_k127_1835751_6 - - - - 0.000000000000000000000000000000000000000000003291 167.0
DYD3_k127_1835751_7 - - - - 0.000000000000000000000000000004603 124.0
DYD3_k127_1835751_8 PFAM Like-Sm ribonucleoprotein, core K04796 - - 0.0000001641 56.0
DYD3_k127_1881690_0 pyruvate flavodoxin ferredoxin oxidoreductase K00174 - 1.2.7.11,1.2.7.3 2.531e-208 659.0
DYD3_k127_1881690_1 Archaeal ammonia monooxygenase subunit A (AmoA) K10944 - 1.14.18.3,1.14.99.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006065 329.0
DYD3_k127_1885610_0 Heat shock 70 kDa protein K04043 - - 4.779e-316 976.0
DYD3_k127_1885610_1 Thioredoxin K03671 - - 0.0000000000000000000000000000000000000006377 151.0
DYD3_k127_1885610_2 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.00000000000000000000000000000000000004003 151.0
DYD3_k127_1885610_3 DnaJ central domain K03686 - - 0.00000000000000000000000000000000344 129.0
DYD3_k127_1920196_0 Protein of unknown function, DUF255 K06888 - - 3.71e-230 723.0
DYD3_k127_1920196_1 Protein of unknown function DUF99 K09120 - - 0.000000000000000000000000000000000000000000004367 169.0
DYD3_k127_1920196_2 - - - - 0.0000000000000000000000000000002755 130.0
DYD3_k127_1922519_0 COG2133 Glucose sorbosone dehydrogenases K21430 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001489 292.0
DYD3_k127_1922519_1 COG0367 Asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000001432 226.0
DYD3_k127_1922519_2 to orf3 of fosmid clone 4B7mr3 - - - 0.00006956 54.0
DYD3_k127_1928237_0 component I K01657 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000164 526.0
DYD3_k127_1928237_1 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002601 357.0
DYD3_k127_1928237_2 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007784 306.0
DYD3_k127_1928237_3 COG2133 Glucose sorbosone dehydrogenases K21430 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001103 280.0
DYD3_k127_1928237_4 FK506 binding K09574 GO:0000413,GO:0001654,GO:0001708,GO:0001932,GO:0001933,GO:0003002,GO:0003674,GO:0003755,GO:0003824,GO:0005488,GO:0005515,GO:0005527,GO:0005528,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005783,GO:0005789,GO:0005829,GO:0006355,GO:0006357,GO:0006457,GO:0006464,GO:0006807,GO:0007154,GO:0007165,GO:0007166,GO:0007224,GO:0007275,GO:0007389,GO:0007399,GO:0007423,GO:0008144,GO:0008150,GO:0008152,GO:0009790,GO:0009792,GO:0009888,GO:0009889,GO:0009892,GO:0009953,GO:0009966,GO:0009967,GO:0009987,GO:0010468,GO:0010556,GO:0010563,GO:0010605,GO:0010646,GO:0010647,GO:0010941,GO:0012505,GO:0016020,GO:0016021,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019904,GO:0021532,GO:0021904,GO:0021915,GO:0023051,GO:0023052,GO:0023056,GO:0030154,GO:0030176,GO:0030510,GO:0030513,GO:0031224,GO:0031227,GO:0031323,GO:0031324,GO:0031326,GO:0031399,GO:0031400,GO:0031967,GO:0031975,GO:0031984,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032991,GO:0035264,GO:0035295,GO:0035556,GO:0036211,GO:0040007,GO:0042175,GO:0042325,GO:0042326,GO:0042802,GO:0042981,GO:0043009,GO:0043010,GO:0043066,GO:0043067,GO:0043069,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045165,GO:0045936,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048589,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051174,GO:0051246,GO:0051248,GO:0051252,GO:0051716,GO:0060255,GO:0060429,GO:0060548,GO:0061077,GO:0065007,GO:0071704,GO:0080090,GO:0090092,GO:0090100,GO:0090287,GO:0097159,GO:0097718,GO:0098827,GO:0140096,GO:1901363,GO:1901564,GO:1903506,GO:2000112,GO:2001141 5.2.1.8 0.00004342 47.0
DYD3_k127_193928_0 Domain of unknown function (DUF373) K08975 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000207 473.0
DYD3_k127_193928_1 Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with geranylgeranyl diphosphate (GGPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30E,34E,38E)-undecaprenyl diphosphate (tritrans,heptacis-UPP). It is probably the precursor of glycosyl carrier lipids K15888 - 2.5.1.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000394 353.0
DYD3_k127_193928_2 NUDIX domain - - - 0.0000000000000000000000000000000000009785 143.0
DYD3_k127_194355_0 Phosphomethylpyrimidine kinase K21219 - 2.5.1.3,2.7.1.49,2.7.4.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008833 394.0
DYD3_k127_194355_1 - - - - 0.00000000000000000000000000000009827 129.0
DYD3_k127_194355_2 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.000000000000000000003285 98.0
DYD3_k127_1948326_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K02858 - 4.1.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000234 248.0
DYD3_k127_1948326_1 riboflavin synthase, alpha K00793 - 2.5.1.9 0.000000000000000000000000000000000000000000000000000000000000001306 224.0
DYD3_k127_1948326_2 nitrite reductase [NAD(P)H] activity K00158,K03809 - 1.2.3.3,1.6.5.2 0.000000000000000000000000000000000000002372 151.0
DYD3_k127_1952461_0 Catalyzes the conversion of dihydroorotate to orotate K00226,K00254,K17723,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.1,1.3.1.14,1.3.5.2,1.3.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001391 348.0
DYD3_k127_1952461_1 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B K02823 - - 0.0000000000000000000000000001883 117.0
DYD3_k127_1952461_2 TatD related DNase K07051 - - 0.00000000000000004371 81.0
DYD3_k127_1956129_0 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003551 600.0
DYD3_k127_1956129_1 DNA Topoisomerase I (eukaryota) K03163 - 5.99.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 481.0
DYD3_k127_1956129_2 SUF system FeS assembly protein K04488 - - 0.000000000000000000000000000000000000000000000000000000000000000000136 232.0
DYD3_k127_1956129_3 Acid phosphatase homologues K19302 - 3.6.1.27 0.00000000000000000000000000000001175 135.0
DYD3_k127_1956129_4 - - - - 0.0000000000000005571 81.0
DYD3_k127_1992878_0 TIGRFAM ABC transporter, substrate-binding protein, aliphatic sulfonates family K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002694 461.0
DYD3_k127_1992878_1 PFAM (2R)-phospho-3-sulfolactate synthase ComA K08097 GO:0003674,GO:0003824,GO:0016829,GO:0016830,GO:0016831,GO:0050545 4.4.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000771 451.0
DYD3_k127_1992878_2 DNA polymerase elongation subunit (Family B) K02319 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006321 452.0
DYD3_k127_1992878_3 Pirin C-terminal cupin domain K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008215 398.0
DYD3_k127_1992878_5 Pyridoxamine 5'-phosphate oxidase K07006 - - 0.00000000000000000000006114 102.0
DYD3_k127_1992878_6 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.0007844 42.0
DYD3_k127_2036906_0 Pyridoxamine 5'-phosphate K07005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004716 273.0
DYD3_k127_2036906_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000001228 223.0
DYD3_k127_2041630_0 Cupin domain - - - 0.000000000000000000000008866 103.0
DYD3_k127_2041630_1 - - - - 0.000000000000000008327 85.0
DYD3_k127_2049429_0 PFAM NHL repeat containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003036 273.0
DYD3_k127_2049429_1 COG2133 Glucose sorbosone dehydrogenases K21430 - - 0.000000000000000000000000000000000000000000000000000000000000000000000223 256.0
DYD3_k127_2049429_2 PFAM NHL repeat containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000001545 233.0
DYD3_k127_2049429_3 - - - - 0.00000000000000001957 84.0
DYD3_k127_2049429_4 oxidoreductase activity - - - 0.00000000656 69.0
DYD3_k127_2053606_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002039 258.0
DYD3_k127_2053606_1 PFAM Glycosyl transferase family 2 K00752 - 2.4.1.212 0.000000000000000000000005495 108.0
DYD3_k127_2060474_0 Lamin Tail Domain - - - 1.661e-287 915.0
DYD3_k127_2066401_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 2.851e-278 872.0
DYD3_k127_2066401_1 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 2.632e-231 723.0
DYD3_k127_2066401_2 Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002761 347.0
DYD3_k127_2066401_3 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001309 297.0
DYD3_k127_2066401_4 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000000002736 161.0
DYD3_k127_2066401_5 - - - - 0.0000000000000000000000000000000000000003682 153.0
DYD3_k127_2066401_6 - - - - 0.00000000000000000000000001778 112.0
DYD3_k127_2072232_0 COG0455 ATPases involved in chromosome partitioning K03496,K03609 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008811 269.0
DYD3_k127_2072232_1 PFAM blue (type 1) copper domain protein - - - 0.0000000000000000000000000000000000000000000000000003475 195.0
DYD3_k127_2072232_2 Circadian clock protein KaiC K06945 - - 0.000000000000000000000000000000000000000000005917 178.0
DYD3_k127_2076538_0 PFAM Cl- channel voltage-gated family protein K03281 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002818 340.0
DYD3_k127_2077918_0 inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001639 523.0
DYD3_k127_2077918_1 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 482.0
DYD3_k127_2077918_2 inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007739 457.0
DYD3_k127_2077918_3 Chorismate mutase type II K00812 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 436.0
DYD3_k127_2077918_4 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002726 334.0
DYD3_k127_2077918_5 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000001656 229.0
DYD3_k127_2077918_6 Prephenate dehydrogenase K04517 - 1.3.1.12 0.000000000000000000000000000000000000000000000000199 187.0
DYD3_k127_2119851_0 Binds the lower part of the 30S subunit head K02982 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005581 280.0
DYD3_k127_2119851_1 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000015 252.0
DYD3_k127_2119851_2 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003146 246.0
DYD3_k127_2119851_3 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.0000000000000000000000000000000000000000000000000000000001278 205.0
DYD3_k127_2119851_4 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.0000000000000000000000000000000000000000000003639 168.0
DYD3_k127_2119851_5 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.00000000000000001892 83.0
DYD3_k127_2119851_6 Located at the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.000000006274 58.0
DYD3_k127_2119851_7 Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends K03538 - 3.1.26.5 0.0000001131 57.0
DYD3_k127_2124467_0 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 507.0
DYD3_k127_2124467_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02472 - 1.1.1.336 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009269 284.0
DYD3_k127_2128184_0 cation diffusion facilitator family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001297 246.0
DYD3_k127_2128184_2 D-glucuronyl C5-epimerase C-terminus - - - 0.000000000000000000000277 101.0
DYD3_k127_2128929_0 ATP phosphoribosyltransferase K00765 - 2.4.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007711 494.0
DYD3_k127_2128929_1 Belongs to the HMG-CoA reductase family K00054 - 1.1.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 447.0
DYD3_k127_2128929_2 Glucose sorbosone - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008443 310.0
DYD3_k127_2196373_0 TIGRFAM archaeal flagellin N-terminal-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009994 263.0
DYD3_k127_2196373_1 Archaeal flagellar protein F K07329 - - 0.0000004418 59.0
DYD3_k127_2196373_2 - - - - 0.0002091 50.0
DYD3_k127_2198036_0 COG2133 Glucose sorbosone dehydrogenases K21430 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008765 309.0
DYD3_k127_2198036_1 cation diffusion facilitator family transporter - - - 0.00000000000000003361 83.0
DYD3_k127_2198036_2 - - - - 0.00000002365 59.0
DYD3_k127_2198969_0 Structure-specific nuclease with 5'-flap endonuclease and 5'-3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double- stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. Acts as a genome stabilization factor that prevents flaps from equilibrating into K04799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 402.0
DYD3_k127_2198969_1 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant - - - 0.000000000000000000000000000000000000000105 153.0
DYD3_k127_2202278_1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins K03294,K20989 - - 0.0000000000000000000000000000000008711 136.0
DYD3_k127_2202278_2 Electron transfer DM13 - - - 0.0000000000007173 75.0
DYD3_k127_2268857_0 Metal dependent phosphohydrolases with conserved 'HD' motif. K06885 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002495 422.0
DYD3_k127_2268857_1 PFAM Ammonia monooxygenase methane monooxygenase, subunit C K10946 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003208 377.0
DYD3_k127_2268857_2 thymidylate kinase K00943 - 2.7.4.9 0.000000000000000000000000000000000000000000000000000000000000008761 221.0
DYD3_k127_2280610_0 Translation initiation factor 2, alpha subunit K03237 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002424 328.0
DYD3_k127_2280610_1 ATP corrinoid adenosyltransferase K19221 - 2.5.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000009478 246.0
DYD3_k127_2280610_2 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.00000000000000000000000000000000000000003394 156.0
DYD3_k127_2280610_3 Tetrahydromethanopterin S-methyltransferase, subunit A K00577 - 2.1.1.86 0.000000000000000000000000000000000000003053 151.0
DYD3_k127_2280610_4 dUTPase - - - 0.000000000000000000000000000000009114 128.0
DYD3_k127_2280610_5 more specifically in 18S rRNA pseudouridylation and in cleavage of pre-rRNA K11130 - - 0.000000000000003447 76.0
DYD3_k127_230720_0 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002218 293.0
DYD3_k127_230720_1 Glutamine amidotransferase of anthranilate synthase K01658 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000001733 235.0
DYD3_k127_230720_2 tRNA methyltransferase complex GCD14 subunit K07442 - 2.1.1.219,2.1.1.220 0.00000000000000000000000000000000002472 138.0
DYD3_k127_230720_3 - - - - 0.000000000000162 73.0
DYD3_k127_2329439_0 Protein of unknown function (DUF354) K09726 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001811 357.0
DYD3_k127_2329439_1 3-hydroxyacyl-CoA dehydrogenase K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000002608 201.0
DYD3_k127_2329439_2 - - - - 0.0000000000000000000000000000000000005331 143.0
DYD3_k127_2329439_4 - - - - 0.0000000000000000116 84.0
DYD3_k127_2329439_5 Transcriptional regulator - - - 0.0000000000001811 75.0
DYD3_k127_236105_0 Coenzyme A transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003563 614.0
DYD3_k127_236105_1 TIGRFAM Glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0036094,GO:0043891,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.2.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 436.0
DYD3_k127_236105_2 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003007 291.0
DYD3_k127_236105_3 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000003995 136.0
DYD3_k127_236105_4 Universal stress protein - - - 0.000000000000000008511 89.0
DYD3_k127_2391277_0 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis K04479 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006923 326.0
DYD3_k127_2409421_0 phosphatidate phosphatase activity K09474,K19302 - 3.1.3.2,3.6.1.27 0.00000000000000000000000000000000000000000000000001008 185.0
DYD3_k127_2409421_1 - - - - 0.00000000000000000000000000000000000000000004188 165.0
DYD3_k127_2409421_2 pyridoxamine 5-phosphate K07005 - - 0.0000000000000000000000000000000000000004468 152.0
DYD3_k127_2409421_3 Peptidase inhibitor I9 - - - 0.000003426 52.0
DYD3_k127_2511019_0 - - - - 0.0000000000000000000000000000000001317 138.0
DYD3_k127_2511019_1 Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules K04483 - - 0.0000000000000000000000002916 115.0
DYD3_k127_2511019_2 - - - - 0.00000000000000000000001129 102.0
DYD3_k127_2532561_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006728 304.0
DYD3_k127_2532561_1 Involved in regulation of DNA replication K10725 - - 0.0000000000000000000000000000000000000000000004518 170.0
DYD3_k127_2532561_2 regulatory protein, arsR - - - 0.00000000000000000000016 99.0
DYD3_k127_253739_0 COG2133 Glucose sorbosone dehydrogenases K21430 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003088 306.0
DYD3_k127_253739_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008956 297.0
DYD3_k127_253739_2 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000000004403 155.0
DYD3_k127_2540346_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1128.0
DYD3_k127_2540346_1 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 383.0
DYD3_k127_2540346_2 D-aminoacyl-tRNA deacylase with broad substrate specificity. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo K09716 - 3.1.1.96 0.0000000000000000000000000000000000000000000000000000000000000000000000000001062 264.0
DYD3_k127_254641_0 DEAD/H associated K03724 - - 4.524e-297 929.0
DYD3_k127_254641_1 Protein of unknown function (DUF763) K09003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006203 430.0
DYD3_k127_254641_2 UbiA prenyltransferase K02548 - 2.5.1.74 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002656 320.0
DYD3_k127_254641_3 biotin-(Acetyl-CoA-carboxylase) ligase K03524 - 6.3.4.15 0.00000000000000000000000000000000000000718 153.0
DYD3_k127_2614538_0 TIGRFAM poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit K03821 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001745 281.0
DYD3_k127_2614538_1 Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) - - - 0.00000000000000000000000000002747 123.0
DYD3_k127_2669097_0 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component K02049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 359.0
DYD3_k127_2669097_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family K00555 - 2.1.1.215,2.1.1.216 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000515 362.0
DYD3_k127_2669097_2 UbiD family decarboxylase K03182 - 4.1.1.98 0.0000000000000000000000000000000000000000000000000000000000000000001016 234.0
DYD3_k127_2669097_3 cytochrome-c peroxidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000001757 226.0
DYD3_k127_2669097_4 NUDIX domain - - - 0.000000000000000000000000000009838 126.0
DYD3_k127_2669097_6 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.000000000006282 67.0
DYD3_k127_2715864_0 PFAM Protein kinase domain - - - 0.000006589 54.0
DYD3_k127_2723356_0 Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication K04802 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000135 385.0
DYD3_k127_2723356_1 PFAM tRNA synthetase, class II (D, K and N) K01893 - 6.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000002964 251.0
DYD3_k127_2723356_2 Belongs to the archaeal rpoM eukaryotic RPA12 RPB9 RPC11 RNA polymerase family K03057 - - 0.000000000000000000000000000000131 126.0
DYD3_k127_2723356_3 COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases K05710 - - 0.0000000000000000000000000132 112.0
DYD3_k127_2723356_4 RNA polymerase Rpb3/Rpb11 dimerisation domain K03056 - 2.7.7.6 0.000000000000005412 77.0
DYD3_k127_2726059_0 ABC-type transport system, involved in lipoprotein release, permease component K02004 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003415 482.0
DYD3_k127_2726059_1 PFAM aldo keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001558 451.0
DYD3_k127_2726059_2 ABC-type antimicrobial peptide transport system, ATPase component K02003,K09810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002342 317.0
DYD3_k127_2726059_3 extracellular matrix structural constituent - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005278 313.0
DYD3_k127_2726059_4 AsnC-type helix-turn-helix domain - - - 0.00000000000000000000002136 103.0
DYD3_k127_2729647_1 - - - - 0.0000000000000000000000000001236 123.0
DYD3_k127_2732173_0 Aldehyde dehydrogenase family K00294 - 1.2.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002014 415.0
DYD3_k127_2732173_1 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000000003833 217.0
DYD3_k127_2732173_2 - - - - 0.0000000007877 64.0
DYD3_k127_2732173_3 Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules K04763 - - 0.000007508 57.0
DYD3_k127_2732173_4 response regulator receiver - - - 0.00001182 53.0
DYD3_k127_2732173_5 - - - - 0.00001207 49.0
DYD3_k127_2733000_0 phosphoglycerate kinase activity K00927,K01803 GO:0003674,GO:0003824,GO:0004618,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 2.7.2.3,5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000298 362.0
DYD3_k127_2733000_1 ribosomal protein K02866 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004732 272.0
DYD3_k127_2733000_2 antibiotic catabolic process K18235 - - 0.000000000000000000000000000000000000000000000000000000000000001621 226.0
DYD3_k127_2733000_3 tRNA intron endonuclease, N-terminal domain K01170 - 4.6.1.16 0.0000000000000000000000000000000000000000000000000000004542 201.0
DYD3_k127_2733000_4 - - - - 0.00000000000000000000000000000000000008374 145.0
DYD3_k127_2733000_5 - - - - 0.0000000009743 61.0
DYD3_k127_2776714_0 resistance protein K14166 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 328.0
DYD3_k127_2776714_2 Winged helix-turn-helix DNA-binding - - - 0.000000000000000000006517 101.0
DYD3_k127_2776714_3 - - - - 0.00000000000000000001723 96.0
DYD3_k127_2777357_0 FeS assembly protein SufB K09014 - - 1.33e-287 885.0
DYD3_k127_2777357_1 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00150 - 1.2.1.59 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001692 488.0
DYD3_k127_2777357_10 Guanylyl transferase CofC like K14941 - 2.7.7.68 0.000000000000000000000000000004265 127.0
DYD3_k127_2777357_2 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004602 471.0
DYD3_k127_2777357_3 PFAM aminotransferase class-III K01845 - 5.4.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008294 402.0
DYD3_k127_2777357_4 Belongs to the ALAD family K01698 - 4.2.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 375.0
DYD3_k127_2777357_5 Uncharacterised protein family UPF0052 K11212 - 2.7.8.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 336.0
DYD3_k127_2777357_6 Glutamine amidotransferase of anthranilate synthase K01658 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000003384 252.0
DYD3_k127_2777357_7 Siroheme synthase K02304 - 1.3.1.76,4.99.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000264 250.0
DYD3_k127_2777357_8 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001334 251.0
DYD3_k127_2777357_9 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000001661 237.0
DYD3_k127_2780476_0 Relaxes both positive and negative superturns and exhibits a strong decatenase activity K03167 - 5.99.1.3 5.494e-275 860.0
DYD3_k127_2780476_1 Relaxes both positive and negative superturns and exhibits a strong decatenase activity K03166 - 5.99.1.3 4.643e-207 647.0
DYD3_k127_2780476_2 Glycosyl transferase family group 2 - - - 6.454e-196 623.0
DYD3_k127_2780476_3 Tyrosine--tRNA ligase K01866 - 6.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008393 495.0
DYD3_k127_2780476_4 Amidohydrolase family K01464 - 3.5.2.2 0.00000000000000000000000000000000000000000001668 165.0
DYD3_k127_2780476_5 ferredoxin - - - 0.0000000000000000000000000002685 113.0
DYD3_k127_2797873_0 phosphoglucomutase phosphomannomutase alpha beta alpha domain I - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007554 443.0
DYD3_k127_2797873_1 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000004109 271.0
DYD3_k127_2797873_2 Located on the platform of the 30S subunit K02948 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001546 251.0
DYD3_k127_2797873_3 ERCC4 domain K10848 - - 0.0000000000000000000000000000000000000000000000000000000000000000000009979 243.0
DYD3_k127_2797873_4 Rhomboid family - - - 0.00000000000000000000000000000000000000000002992 164.0
DYD3_k127_2797873_5 Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation K03433 - 3.4.25.1 0.00000000000000000000000000000003389 126.0
DYD3_k127_2797873_6 zinc finger - - - 0.000000000009521 66.0
DYD3_k127_2801178_0 Trypsin-like serine protease with C-terminal PDZ domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002245 353.0
DYD3_k127_2801178_1 - - - - 0.000000000000000000000000000000002232 135.0
DYD3_k127_2801178_2 DNA-binding transcription factor activity - - - 0.0000000000009104 69.0
DYD3_k127_2801178_3 - - - - 0.000002738 50.0
DYD3_k127_2811964_0 Cell division protein 48 (CDC48), domain 2 K13525 - - 0.0 1119.0
DYD3_k127_2811964_1 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K01953,K06927 - 6.3.1.14,6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006333 344.0
DYD3_k127_2811964_2 response regulator, receiver - - - 0.0000000000000000169 87.0
DYD3_k127_2811964_3 response regulator, receiver - - - 0.00000000005847 67.0
DYD3_k127_2811964_4 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000003234 61.0
DYD3_k127_2811964_5 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07709 - 2.7.13.3 0.00004683 51.0
DYD3_k127_2821001_0 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000008344 237.0
DYD3_k127_2828265_0 - - - - 0.00000000000000000000000000000000002604 139.0
DYD3_k127_2834860_0 MOFRL family K11529 - 2.7.1.165 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 336.0
DYD3_k127_2834860_1 Galactose oxidase, central domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007564 314.0
DYD3_k127_2834860_2 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07709 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000003402 257.0
DYD3_k127_2834860_3 Uncharacterized conserved protein (DUF2203) - - - 0.0000000000000000000000000000000000000000000000000001774 188.0
DYD3_k127_2834860_4 Universal stress protein - - - 0.000000000000000000000000006465 115.0
DYD3_k127_2834860_5 membrane protein domain - - - 0.00000000000000001044 85.0
DYD3_k127_2834860_6 Putative nucleotidyltransferase substrate binding domain K07182 - - 0.0000000000009992 77.0
DYD3_k127_2834860_7 membrane protein domain - - - 0.0002096 46.0
DYD3_k127_2834860_8 - - - - 0.0004623 46.0
DYD3_k127_2843161_0 LOR SDH bifunctional - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 599.0
DYD3_k127_2843161_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004183 576.0
DYD3_k127_2843161_2 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000001619 186.0
DYD3_k127_2843161_3 - - - - 0.00000000000000000000000000000000004349 136.0
DYD3_k127_2858007_0 Protein of unknown function (DUF1326) - - - 0.0000000000000000001343 90.0
DYD3_k127_2858007_1 Protein of unknown function (DUF1326) - - - 0.00000000000001957 73.0
DYD3_k127_2858007_3 - - - - 0.0000000001167 68.0
DYD3_k127_2858125_0 Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. LysY sub-subfamily K05829 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 599.0
DYD3_k127_2858125_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K05830 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003085 522.0
DYD3_k127_2858125_2 Involved in both the arginine and lysine biosynthetic pathways. Phosphorylates the LysW-bound precursors glutamate (for arginine biosynthesis), respectively alpha-aminoadipate (for lysine biosynthesis) K05828 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 377.0
DYD3_k127_2858125_3 COG1522 Transcriptional regulators - - - 0.00000006736 56.0
DYD3_k127_2860468_0 PFAM von Willebrand factor type A domain K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001567 262.0
DYD3_k127_2860468_1 C-terminal domain of CHU protein family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001558 271.0
DYD3_k127_2860468_2 Animal haem peroxidase - - - 0.00000000000000000001445 108.0
DYD3_k127_2872249_0 AhpC/TSA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009701 398.0
DYD3_k127_2872249_1 cytochrome c biogenesis protein K06196 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002096 361.0
DYD3_k127_2872249_2 Circadian clock protein KaiC K06945 - - 0.00000000000000000000000000000000000006367 146.0
DYD3_k127_2872249_3 - - - - 0.00000000000000000000000001337 117.0
DYD3_k127_2909219_0 chromosome segregation and condensation protein ScpA K05896 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006653 263.0
DYD3_k127_2909219_1 Delta-aminolevulinic acid dehydratase K01698 GO:0003674,GO:0003824,GO:0004655,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.2.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000001765 254.0
DYD3_k127_2909219_2 segregation and condensation protein K06024 - - 0.0000000000000000000000000000000000000000000000000000000000000000009656 231.0
DYD3_k127_2909219_3 Functions by promoting the formation of the first peptide bond K03263 - - 0.00000000000000000000000000000000000000000000000000000576 192.0
DYD3_k127_2909219_4 - - - - 0.000000000000000000000000000000000000000000000002126 180.0
DYD3_k127_2909219_5 Ribosomal protein S8e K02995 - - 0.0000000000000000000000000000000000000000001896 162.0
DYD3_k127_2909219_6 TIGRFAM phosphodiesterase, MJ0936 family K07095 - - 0.0000000000000000000000000000000000193 139.0
DYD3_k127_2909219_7 Glycosyl transferase family group 2 K00694 - 2.4.1.12 0.00000000009469 72.0
DYD3_k127_2920380_0 Membrane-bound serine protease (ClpP class) K07403 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006926 509.0
DYD3_k127_2920380_1 Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid K18235 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 410.0
DYD3_k127_2920380_2 COG0330 Membrane protease subunits stomatin prohibitin homologs - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008544 388.0
DYD3_k127_2920380_7 - - - - 0.0000004439 56.0
DYD3_k127_2920380_9 Belongs to the universal stress protein A family - - - 0.0007884 49.0
DYD3_k127_2929959_0 HD domain K00951,K01139 - 2.7.6.5,3.1.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000033 242.0
DYD3_k127_2929959_2 CHRD domain - - - 0.00000000000000001139 87.0
DYD3_k127_2949543_0 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002221 436.0
DYD3_k127_2949543_1 Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3-diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2,3-di-O-phytanyl-sn-glyceryl phosphate) from 2,3-di-O-geranylgeranylglyceryl phosphate (DGGGP) via the hydrogenation of each double bond of the isoprenoid chains - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004474 313.0
DYD3_k127_2949543_2 Zn-ribbon RNA-binding protein with a function in translation K07580 - - 0.0000000000000000000000000000002113 124.0
DYD3_k127_2949543_3 - - - - 0.000000000000000000000000000003739 121.0
DYD3_k127_2949543_4 Promotes the exchange of GDP for GTP in EF-1-alpha GDP, thus allowing the regeneration of EF-1-alpha GTP that could then be used to form the ternary complex EF-1-alpha GTP AAtRNA K03232 - - 0.0000000000000000000000000009088 114.0
DYD3_k127_2949543_5 Thioredoxin K03671 - - 0.0000000000002089 71.0
DYD3_k127_2949543_6 - - - - 0.00000000000269 69.0
DYD3_k127_2951210_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 1.282e-270 842.0
DYD3_k127_2951210_1 Glyoxalase-like domain K01759 - 4.4.1.5 0.0000000000000000000001271 99.0
DYD3_k127_2957751_0 - - - - 0.000000000000000000000000000000000000000005278 166.0
DYD3_k127_297766_0 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.000000000000000000000000000000000000000000000001056 181.0
DYD3_k127_297766_1 Diacylglycerol kinase catalytic domain (presumed) - - - 0.000000000000000000000000000000004186 141.0
DYD3_k127_297766_2 O-methyltransferase activity K00545 - 2.1.1.6 0.0000000000000000000000009185 113.0
DYD3_k127_2978789_0 Involved in regulation of DNA replication K10725 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009221 522.0
DYD3_k127_2978789_1 Possesses two activities a DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3' to 5' direction. Has a template-primer preference which is characteristic of a replicative DNA polymerase K02323 - 2.7.7.7 0.00000000000000000000000000000000001043 136.0
DYD3_k127_2978789_2 - - - - 0.0000005356 55.0
DYD3_k127_3003865_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 2.291e-258 807.0
DYD3_k127_3028803_0 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate K07558 - 2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000000004815 254.0
DYD3_k127_3028803_1 PAC2 family K06869 - - 0.0000000000000000000000000000000000000000000000000000000005809 210.0
DYD3_k127_3028803_2 Ser thr protein kinase K07176 - - 0.000000000000000000000000000000000000000000000001893 182.0
DYD3_k127_3028803_3 - - - - 0.00000000000000004062 83.0
DYD3_k127_3057627_0 ATP-grasp domain K01955 - 6.3.5.5 0.0000000000000000000000000000000000000001698 162.0
DYD3_k127_3057627_1 DNA polymerase IV (family X) K02347,K04477 - - 0.000000000000000002459 93.0
DYD3_k127_3058587_0 Belongs to the GARS family K01945 - 6.3.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002824 498.0
DYD3_k127_3058587_1 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005678 311.0
DYD3_k127_3058587_2 phosphoribosylglycinamide formyltransferase K11175 - 2.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004615 271.0
DYD3_k127_3058587_3 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.000000000000000000000000000003196 127.0
DYD3_k127_3058587_4 Cyclophilin-like K09143 - - 0.0000000000000000000000000002769 119.0
DYD3_k127_3058587_5 - - - - 0.000000000000000001115 91.0
DYD3_k127_3064429_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03041 - 2.7.7.6 2.142e-275 853.0
DYD3_k127_3064429_1 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center K02992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002637 309.0
DYD3_k127_3064429_2 With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits K02950 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003282 259.0
DYD3_k127_3064429_3 Participates in transcription termination K02600 - - 0.0000000000000000000000000000000000000000000000000000000000005453 213.0
DYD3_k127_3064429_4 Belongs to the eukaryotic ribosomal protein eL30 family K02908 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000004884 52.0
DYD3_k127_3064877_0 Belongs to the peptidase M50B family - GO:0003674,GO:0003824,GO:0003938,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006183,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046039,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 373.0
DYD3_k127_3064877_1 PFAM NHL repeat containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000001584 230.0
DYD3_k127_3064877_2 COG0589 Universal stress protein UspA and related nucleotide-binding proteins K20989 - - 0.000000000000000000001004 98.0
DYD3_k127_3064877_3 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000009169 56.0
DYD3_k127_3064877_4 CBS domain - - - 0.000946 44.0
DYD3_k127_3066021_0 D-isomer specific 2-hydroxyacid dehydrogenase K00015,K00018 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016616,GO:0016618,GO:0030267,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.1.1.26,1.1.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003249 324.0
DYD3_k127_3066021_1 Na -dependent transporter K03453 - - 0.0000000000000000000000000000000000000000000000000000000000000000008419 238.0
DYD3_k127_3066021_2 phosphohistidine phosphatase, SixA K08296 - - 0.00000000000000000000000000000000000002287 149.0
DYD3_k127_3066021_3 PFAM transcriptional coactivator pterin dehydratase K01724 - 4.2.1.96 0.000000000000000001306 92.0
DYD3_k127_3069761_0 PFAM Cl- channel voltage-gated family protein K03281 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009221 473.0
DYD3_k127_3069761_1 Mo-co oxidoreductase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001156 274.0
DYD3_k127_3069761_2 MoeA domain protein domain I and II K03750,K07219 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000002532 222.0
DYD3_k127_3069761_3 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000004752 157.0
DYD3_k127_3069761_4 Electron transfer DM13 - - - 0.0000000000002563 78.0
DYD3_k127_3069761_5 COG2133 Glucose sorbosone dehydrogenases K21430 - - 0.00000001073 57.0
DYD3_k127_3069761_6 COG COG0589 Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms - - - 0.00000001131 56.0
DYD3_k127_3069761_7 polysaccharide catabolic process K05991 - 3.2.1.123 0.00001384 56.0
DYD3_k127_3069761_8 COG0589 Universal stress protein UspA and related nucleotide-binding proteins K03294 - - 0.00008191 48.0
DYD3_k127_3071107_0 Epimerase dehydratase K01784,K12454 - 5.1.3.10,5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003753 377.0
DYD3_k127_3071107_2 NAD(P)H-binding K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000003893 178.0
DYD3_k127_3071107_4 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791,K13019 - 5.1.3.14,5.1.3.23 0.000000000000000000000001654 105.0
DYD3_k127_3071107_5 Methionine biosynthesis protein MetW - - - 0.0000000000000001407 89.0
DYD3_k127_3074020_0 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002021 533.0
DYD3_k127_3074020_1 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000003925 252.0
DYD3_k127_3074020_2 response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000001244 234.0
DYD3_k127_3081848_0 aconitate hydratase K01681 - 4.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000006158 260.0
DYD3_k127_3088500_0 multicopper - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005823 380.0
DYD3_k127_3088500_1 PFAM 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000165 275.0
DYD3_k127_3088500_2 integrase family - - - 0.00000000000000000000000000000000007023 139.0
DYD3_k127_3097322_0 Cupin superfamily (DUF985) K09705 - - 0.000000000000000000000000000000000000000000000000000001961 195.0
DYD3_k127_3097322_1 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000003522 144.0
DYD3_k127_3097639_0 DSBA-like thioredoxin domain - - - 0.000000000000000000000000000000000000000000000000000186 195.0
DYD3_k127_3097639_1 - - - - 0.000000000000000000000000000000000000000000003442 167.0
DYD3_k127_3097639_2 ABC-type nitrate sulfonate bicarbonate transport system, permease component K02050 - - 0.00000000000000000000000000000000000000000009652 163.0
DYD3_k127_3097639_3 Haem utilisation ChuX/HutX - - - 0.0000000000000000008304 92.0
DYD3_k127_3097639_4 Flavodoxin reductases (Ferredoxin-NADPH reductases) family 1 K02613 - - 0.000004141 57.0
DYD3_k127_3100799_0 Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1-phosphate (G1P). The G1P thus generated is used as the glycerophosphate backbone of phospholipids in the cellular membranes of Archaea K00096 - 1.1.1.261 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000991 443.0
DYD3_k127_3100799_1 Peptidyl-prolyl cis-trans K01802 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007895 305.0
DYD3_k127_3101682_0 S-adenosylmethionine synthetase K00789 - 2.5.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006266 592.0
DYD3_k127_3101682_1 Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A K02188 - 2.1.1.195 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002553 446.0
DYD3_k127_3101682_2 Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000001725 261.0
DYD3_k127_3101682_3 Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits K03236 - - 0.000000000000000000000000000000000000000000004629 165.0
DYD3_k127_3101682_4 Rio2, N-terminal K07179 - 2.7.11.1 0.00000000000000000000000000000000000000000008037 171.0
DYD3_k127_3101682_5 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.0000000000000000000000000000000000001976 144.0
DYD3_k127_3101682_6 snRNP Sm proteins K04796 - - 0.0000000000000000000000000000000000936 134.0
DYD3_k127_3101682_7 RecA RadA K04482,K04483 - - 0.0000000000000000002131 95.0
DYD3_k127_3111153_0 Tetrapyrrole (Corrin/Porphyrin) Methylases K05934 - 2.1.1.131 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003717 460.0
DYD3_k127_3111153_1 PFAM Alcohol dehydrogenase GroES domain protein, Alcohol dehydrogenase zinc-binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000003932 216.0
DYD3_k127_3111153_2 haloacid dehalogenase-like hydrolase K07026 - 3.1.3.70 0.000000000000000000000000000000000000000007793 164.0
DYD3_k127_3111153_3 CHRD domain - - - 0.0000000000000000000000003022 112.0
DYD3_k127_3111153_4 membrane-associated protein domain - - - 0.00000000007315 63.0
DYD3_k127_3111153_5 isomerase activity K01821 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0044237 5.3.2.6 0.000001164 53.0
DYD3_k127_311741_0 Protein of unknown function (DUF1326) - - - 0.00000000000000000000000000000000000000000000000000000000000003651 218.0
DYD3_k127_311741_1 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000008917 202.0
DYD3_k127_311741_2 Glyoxalase bleomycin resistance protein dioxygenase K06996 - - 0.000000000000000000000000000000000004029 141.0
DYD3_k127_311741_4 C-terminal four TMM region of protein-O-mannosyltransferase - - - 0.000000000000002753 89.0
DYD3_k127_311741_5 cellulase activity - - - 0.000000000000083 84.0
DYD3_k127_311741_6 F5/8 type C domain - - - 0.0000000000002292 83.0
DYD3_k127_311741_7 phosphorelay signal transduction system - - - 0.0000000000005399 74.0
DYD3_k127_311741_8 ParB-like nuclease domain K03497 - - 0.000000000001063 71.0
DYD3_k127_313900_0 Proteasome endopeptidase complex K03432 - 3.4.25.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001775 332.0
DYD3_k127_313900_1 Trypsin-like serine protease with C-terminal PDZ domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 335.0
DYD3_k127_313900_2 PFAM SPFH domain Band 7 family - - - 0.0000000000000000008615 86.0
DYD3_k127_313900_3 - - - - 0.0000002415 57.0
DYD3_k127_3148592_0 Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules K04483 GO:0000150,GO:0000217,GO:0000400,GO:0000724,GO:0000725,GO:0000730,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003697,GO:0003824,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006312,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009314,GO:0009628,GO:0009987,GO:0010212,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022607,GO:0033554,GO:0034622,GO:0034641,GO:0042148,GO:0042623,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0045003,GO:0046483,GO:0050896,GO:0051716,GO:0065003,GO:0065004,GO:0071704,GO:0071824,GO:0071840,GO:0090304,GO:0090735,GO:0097159,GO:0140097,GO:1901360,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002387 499.0
DYD3_k127_3148592_1 Protein of unknown function (DUF790) K09744 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003026 275.0
DYD3_k127_3168087_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000126 432.0
DYD3_k127_3168087_1 Catalyzes the transfer of diphosphate from ATP to 6- hydroxymethyl-7,8-dihydropterin (6-HMD), leading to 6- hydroxymethyl-7,8-dihydropterin diphosphate (6-HMDP) K07142 - 2.7.6.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005008 288.0
DYD3_k127_3168087_2 - - - - 0.000000000000000000000000000000000000000000000008521 179.0
DYD3_k127_3168087_3 FUN14 family - - - 0.000000000001485 72.0
DYD3_k127_3169765_0 Aminotransferase class-V - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002416 330.0
DYD3_k127_3169765_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000008718 71.0
DYD3_k127_3169765_3 - - - - 0.00000001552 62.0
DYD3_k127_3169765_4 PFAM cyclase dehydrase - - - 0.0009013 48.0
DYD3_k127_318073_0 RNase L inhibitor, RLI K06174 - - 2.384e-222 698.0
DYD3_k127_318073_1 Met-10+ like-protein K15429 - 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009069 301.0
DYD3_k127_318073_2 FR47-like protein K03789 - 2.3.1.128 0.0000000000000000000000000000000000000000000000000000000000000001587 222.0
DYD3_k127_318073_3 HTH DNA binding domain - - - 0.00001507 49.0
DYD3_k127_322634_0 COG2133 Glucose sorbosone dehydrogenases K21430 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007769 314.0
DYD3_k127_322634_1 Antibiotic biosynthesis monooxygenase - - - 0.000000000000003714 80.0
DYD3_k127_329303_0 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000001139 238.0
DYD3_k127_329303_1 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000000000000000000000000001527 244.0
DYD3_k127_329303_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000001827 233.0
DYD3_k127_329303_3 - - - - 0.000000000000000000000002068 109.0
DYD3_k127_329350_0 Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3-diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2,3-di-O-phytanyl-sn-glyceryl phosphate) from 2,3-di-O-geranylgeranylglyceryl phosphate (DGGGP) via the hydrogenation of each double bond of the isoprenoid chains - - - 4.024e-238 743.0
DYD3_k127_329350_1 Translin family K07477 - - 0.000000000000000000000000000000000000000000000000000000001661 207.0
DYD3_k127_329350_2 A structure-specific endonuclease that resolves Holliday junction (HJ) intermediates during genetic recombination. Cleaves 4-way DNA junctions introducing paired nicks in opposing strands, leaving a 5'-terminal phosphate and a 3'-terminal hydroxyl group that are ligated to produce recombinant products - - - 0.00000000000000000000000000000000000000000000000000001803 196.0
DYD3_k127_329350_3 protein (ATP-grasp superfamily) K07159 - - 0.000000000000000000000000000000000000000001768 161.0
DYD3_k127_329350_4 COG1599 Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins K07466 - - 0.000000000000000000000000000003507 121.0
DYD3_k127_329350_5 Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S- specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX K17759 - 5.1.99.6 0.0000000000000000000007009 98.0
DYD3_k127_330270_0 Belongs to the TPP enzyme family K00156,K00158 - 1.2.3.3,1.2.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003711 419.0
DYD3_k127_330270_1 PFAM peptidase S1 and S6, chymotrypsin Hap K04771,K08070 - 1.3.1.74,3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 360.0
DYD3_k127_330270_2 - - - - 0.000005682 48.0
DYD3_k127_3317459_0 Monooxygenase subunit B protein K10945 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006108 325.0
DYD3_k127_3317459_1 PFAM Ammonia monooxygenase methane monooxygenase, subunit C K10946 - - 0.00000000000000000000000000000000000000000000000000000000000002999 215.0
DYD3_k127_3317459_2 - - - - 0.0000000000000000000000000001252 116.0
DYD3_k127_3317459_3 - - - - 0.000001171 51.0
DYD3_k127_3321590_0 May function in recognizing stalled ribosomes, interact with stem-loop structures in stalled mRNA molecules, and effect endonucleolytic cleavage of the mRNA. May play a role in the release non-functional ribosomes and degradation of damaged mRNAs. Has endoribonuclease activity K06965 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001435 356.0
DYD3_k127_3321590_1 - - - - 0.00000000000000000000000000000000000000000000000004554 182.0
DYD3_k127_3321590_2 Archaeal transcriptional regulator TrmB - - - 0.00000000000000000000000000000000000000000001665 164.0
DYD3_k127_3321590_3 PFAM CutA1 divalent ion tolerance protein K03926 - - 0.000000000000000000000001728 106.0
DYD3_k127_3321590_4 conserved protein implicated in secretion - - - 0.0000000000000000009777 87.0
DYD3_k127_3358830_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 1.057e-239 748.0
DYD3_k127_3358830_1 Anaerobic ribonucleoside-triphosphate reductase K21636 - 1.1.98.6 5.404e-224 703.0
DYD3_k127_3379627_0 COG1960 Acyl-CoA dehydrogenases K00252 - 1.3.8.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006578 563.0
DYD3_k127_3379627_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823,K00836 - 2.6.1.19,2.6.1.76 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 512.0
DYD3_k127_3402534_0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain K01251 - 3.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008529 475.0
DYD3_k127_3402534_1 PFAM tRNA synthetases class I (C) catalytic domain K01883 - 6.1.1.16 0.000000000000000000000000000000000000000000000000000000000000000000001345 239.0
DYD3_k127_3402534_2 COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases K00363,K15762 - 1.7.1.15 0.00000000000000000000000000000000000000006297 153.0
DYD3_k127_3432730_0 PFAM Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000001567 194.0
DYD3_k127_3435137_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01887 - 6.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002177 610.0
DYD3_k127_3435137_1 conserved protein implicated in secretion - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006214 251.0
DYD3_k127_3435137_2 Phosphoglycolate phosphatase K22223 - 3.1.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000002346 248.0
DYD3_k127_3435137_3 - - - - 0.0000000000000000000000000003386 116.0
DYD3_k127_3435137_4 - - - - 0.0000000000000000000000009633 104.0
DYD3_k127_3435137_5 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000000004107 104.0
DYD3_k127_3462032_0 COG0477 Permeases of the major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005188 290.0
DYD3_k127_3462032_2 SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000001235 190.0
DYD3_k127_3462032_4 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000007758 119.0
DYD3_k127_3493258_0 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002953 397.0
DYD3_k127_3493258_1 PFAM ABC-2 type transporter K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 311.0
DYD3_k127_3493258_2 metal-dependent protease of the PAD1 JAB1 superfamily - - - 0.000000000000000000000000000000000000000000000001345 177.0
DYD3_k127_3493258_3 - - - - 0.000000000000000000000000000000000000008048 159.0
DYD3_k127_3493258_4 - - - - 0.0000000000000000000000001803 110.0
DYD3_k127_3493258_6 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains - - - 0.00000000004085 70.0
DYD3_k127_3506067_0 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008279 456.0
DYD3_k127_3506067_1 GHMP kinases N terminal domain K00891 - 2.7.1.71 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007907 289.0
DYD3_k127_3506067_2 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.000000000000000000000000000000000000000000000002101 179.0
DYD3_k127_3506067_3 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.00000000000000000000000000000000788 128.0
DYD3_k127_351150_0 Tfp pilus assembly protein FimV - - - 0.0000000000000000000000000000000000000000000000000000000000000000007048 252.0
DYD3_k127_351150_2 - - - - 0.0000000003602 70.0
DYD3_k127_3603450_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K09759 - 6.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003023 574.0
DYD3_k127_3603450_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000004871 200.0
DYD3_k127_3603450_2 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.000000000000000000000000000000000000003839 148.0
DYD3_k127_3603450_3 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.000005756 52.0
DYD3_k127_3605688_0 Radical SAM K11780 - 2.5.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007028 420.0
DYD3_k127_3605688_1 Glycosyl transferase family 21 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003676 360.0
DYD3_k127_3605688_2 Radical SAM K11781 - 2.5.1.77 0.00000009682 56.0
DYD3_k127_3641505_0 Possesses two activities a DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3'- to 5'-direction. Has a template-primer preference which is characteristic of a replicative DNA polymerase K02322 - 2.7.7.7 0.0 1207.0
DYD3_k127_3641505_1 N-methylhydantoinase A acetone carboxylase, beta subunit - - - 1.914e-310 965.0
DYD3_k127_3641505_2 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA K00784 - 3.1.26.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001335 394.0
DYD3_k127_3641505_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003599 287.0
DYD3_k127_3641505_4 Ribose-phosphate pyrophosphokinase K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000145 266.0
DYD3_k127_3641505_5 Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates K18532 - 2.7.4.3 0.0000000000000000000000023 106.0
DYD3_k127_3643521_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002401 546.0
DYD3_k127_3643521_1 Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) K01823 - 5.3.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 498.0
DYD3_k127_3643521_2 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006454 359.0
DYD3_k127_3643521_3 Belongs to the MEMO1 family K06990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004423 325.0
DYD3_k127_3643521_4 Belongs to the FPP GGPP synthase family K13787 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000001881 258.0
DYD3_k127_3643521_5 Amino acid kinase family K06981 - 2.7.4.26 0.0000000000000000000000000000000000000000000000000000000000000000000000002796 255.0
DYD3_k127_3643521_6 Catalyzes the phosphorylation of (R)-mevalonate (MVA) to (R)-mevalonate 5-phosphate (MVAP). Functions in the mevalonate (MVA) pathway leading to isopentenyl diphosphate (IPP), a key precursor for the biosynthesis of isoprenoid compounds such as archaeal membrane lipids K00869 - 2.7.1.36 0.0000000000000000000000000000000000000000000000000000000000000000001895 241.0
DYD3_k127_3643521_7 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03058 - 2.7.7.6 0.0000000000000000000000000000000000000003109 152.0
DYD3_k127_3660018_1 RNA-binding protein contains TRAM domain - - - 0.0000000000000000000000001469 107.0
DYD3_k127_3660018_2 Glycosyltransferase Family 4 - - - 0.00000000000000000000002163 113.0
DYD3_k127_3660018_3 RNA-binding protein contains TRAM domain - - - 0.000000000000003534 80.0
DYD3_k127_3661997_0 Nitroreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002084 257.0
DYD3_k127_3661997_1 Zn-finger in ubiquitin-hydrolases and other protein - - - 0.00000000000000000000000000000000000000148 148.0
DYD3_k127_3661997_3 F5/8 type C domain - - - 0.0000000001437 66.0
DYD3_k127_3661997_4 HNH endonuclease - - - 0.000001454 55.0
DYD3_k127_3661997_5 F5/8 type C domain - - - 0.00002211 54.0
DYD3_k127_3675908_0 Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB) K03124 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000049 461.0
DYD3_k127_3675908_1 Voltage gated chloride channel K03281 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001794 271.0
DYD3_k127_3675908_2 DnaJ-class molecular chaperone with C-terminal Zn finger domain - - - 0.0000000000000000000000000000000000000000000000000002591 191.0
DYD3_k127_3675908_3 CoA binding domain K06929 - - 0.0000000000000000000000000000000000000000000000001954 181.0
DYD3_k127_3675908_4 - - - - 0.0000000000000000001424 94.0
DYD3_k127_3675908_5 serine-type endopeptidase activity - - - 0.00000000000000003255 89.0
DYD3_k127_3675908_6 YVTN family beta-propeller repeat - - - 0.0001128 54.0
DYD3_k127_367807_0 Belongs to the ompA family K20276 - - 0.0000000000000000000000508 104.0
DYD3_k127_367807_1 - - - - 0.00000008056 55.0
DYD3_k127_367807_2 FAD dependent oxidoreductase - - - 0.00005131 46.0
DYD3_k127_369899_0 TIGRFAM glucosamine--fructose-6-phosphate aminotransferase (isomerizing) K00820 - 2.6.1.16 7.043e-234 736.0
DYD3_k127_369899_1 PFAM S-layer - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007456 398.0
DYD3_k127_369899_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.00000000000000000000000000000000000000000000000000000000000000001441 227.0
DYD3_k127_369899_3 Belongs to the UPF0284 family - - - 0.000000000000000000000000000000007095 132.0
DYD3_k127_369899_4 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.0000000002631 63.0
DYD3_k127_3723622_0 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000288 532.0
DYD3_k127_3723622_1 SMC proteins Flexible Hinge Domain K03529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001362 403.0
DYD3_k127_3723622_2 Universal stress protein - - - 0.0000000000000000008123 89.0
DYD3_k127_3747883_0 Belongs to the sulfate adenylyltransferase family K00958 - 2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001753 496.0
DYD3_k127_3747883_1 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006399 341.0
DYD3_k127_3747883_2 Phosphoadenosine phosphosulfate reductase family K00390 - 1.8.4.10,1.8.4.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003699 327.0
DYD3_k127_3762923_0 -transport system K02026 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002657 290.0
DYD3_k127_3762923_1 TIGRFAM excinuclease ABC, C subunit K03703 - - 0.000000000000000000000000000000000000000007688 156.0
DYD3_k127_3762923_2 Binding-protein-dependent transport system inner membrane component K02025 - - 0.0000000000000000000000003394 107.0
DYD3_k127_3764884_0 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004324 297.0
DYD3_k127_3764884_1 GTP cyclohydrolase I K01495 - 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001591 280.0
DYD3_k127_3764884_2 Queuosine biosynthesis protein QueC K06920 - 6.3.4.20 0.00000000000000000000000000000000000000000000000000001235 193.0
DYD3_k127_3764884_4 Queuosine biosynthesis protein QueC K06920 - 6.3.4.20 0.000000000000000017 84.0
DYD3_k127_3764884_5 Belongs to the class-I aminoacyl-tRNA synthetase family - - - 0.000000000001598 69.0
DYD3_k127_3773855_0 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007391 271.0
DYD3_k127_3773855_1 HIT domain K02503 - - 0.00000000000000000000000000000000000003779 147.0
DYD3_k127_3773855_2 hydrolase (HAD superfamily) K01091,K01560,K01561,K07025 - 3.1.3.18,3.8.1.2,3.8.1.3 0.00000000000000000000000002088 115.0
DYD3_k127_3791436_0 glutamate synthase K00266,K03388,K20202 - 1.4.1.13,1.4.1.14,1.8.1.19,1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 1.05e-243 760.0
DYD3_k127_3791436_2 - - - - 0.000000000000000000000000000000001465 139.0
DYD3_k127_3791436_3 zinc finger - - - 0.00000000000000000000003241 102.0
DYD3_k127_3791436_4 - - - - 0.00000001796 60.0
DYD3_k127_3806726_0 Belongs to the peptidase M50B family - GO:0003674,GO:0003824,GO:0003938,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006183,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046039,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002505 343.0
DYD3_k127_3806726_1 Mechanosensitive ion channel - - - 0.000000000000000000000000000001194 133.0
DYD3_k127_3806726_2 Universal stress protein - - - 0.0000000000000000000000000004053 118.0
DYD3_k127_3806726_4 CBS domain - - - 0.000000002741 69.0
DYD3_k127_3806735_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004347 594.0
DYD3_k127_3806735_1 Involved in regulation of DNA replication K10725 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004257 460.0
DYD3_k127_3806735_2 Indole-3-glycerol phosphate synthase K01609 - 4.1.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000006931 266.0
DYD3_k127_3806735_3 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000006143 257.0
DYD3_k127_3814168_0 PFAM TCP-1 cpn60 chaperonin family K22447 - - 5.764e-289 895.0
DYD3_k127_3814168_1 Belongs to the carbohydrate kinase PfkB family K00852 - 2.7.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001989 287.0
DYD3_k127_3814168_2 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.000000000000000000000000000000000000000000000000000000000000000000000000000001124 266.0
DYD3_k127_384625_0 multicopper - - - 2.107e-246 765.0
DYD3_k127_384625_1 - K07043 - - 0.000000000000000000000000000000000000000000000000000000000000000000007221 234.0
DYD3_k127_384625_2 Belongs to the UPF0218 family K09735 - - 0.0000000000000000000000000000002503 123.0
DYD3_k127_384625_3 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.00000000000000000000003226 100.0
DYD3_k127_3847448_0 MafB19-like deaminase K01493 - 3.5.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000002452 252.0
DYD3_k127_3847448_1 Asp/Glu/Hydantoin racemase K01776 - 5.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000001792 253.0
DYD3_k127_3847448_2 PFAM TPR repeat-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000001912 235.0
DYD3_k127_3847448_4 - - - - 0.000000004317 61.0
DYD3_k127_3847448_5 zinc finger - - - 0.00003569 48.0
DYD3_k127_38678_0 3-hydroxyacyl-CoA dehydrogenase K15016 - 1.1.1.35,4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005308 533.0
DYD3_k127_38678_1 Rossmann fold nucleotide-binding protein K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000001182 216.0
DYD3_k127_38678_2 Ribosome biogenesis protein, C-terminal K09140 - - 0.00000000000000000000000000000000000000000000000007698 182.0
DYD3_k127_38678_3 Belongs to the UPF0201 family K09736 - - 0.000000000000000000000000001638 115.0
DYD3_k127_3891984_1 - - - - 0.0000000000000000000000000000000000000000002967 167.0
DYD3_k127_3910440_0 Carbamoyl-phosphate synthase L chain K18603 - 6.4.1.2,6.4.1.3 1.173e-237 743.0
DYD3_k127_3910440_1 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K18604 - 2.1.3.15,6.4.1.2,6.4.1.3 5.949e-235 736.0
DYD3_k127_3910440_2 tRNA methyl transferase K06864 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005566 336.0
DYD3_k127_3910440_3 Protein of unknown function DUF111 K09121 - 4.99.1.12 0.0000000000000000000000000000000000000000000000000000000000004996 219.0
DYD3_k127_3910440_4 Redoxin K03564 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000001922 209.0
DYD3_k127_3910440_5 biotin carboxyl carrier K00627,K01571,K15037,K18605 - 2.3.1.12,4.1.1.3 0.0000000000000000000000000000000000000000000000000000162 193.0
DYD3_k127_3910440_6 ATPase family associated with various cellular activities (AAA) K04800 - - 0.00000000000000000000000000000000000000008509 160.0
DYD3_k127_3910440_7 - K03646 - - 0.00000000000000005249 82.0
DYD3_k127_391909_0 NAD-dependent epimerase dehydratase K01710 - 4.2.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001346 433.0
DYD3_k127_391909_1 Cobalamin B12-binding domain protein K16955,K22491 - - 0.000000000000000000000000000000000000000000000000000000000000003828 227.0
DYD3_k127_391909_2 Transcriptional regulator - - - 0.00000000000000008377 83.0
DYD3_k127_3932840_0 aspartate-semialdehyde dehydrogenase K00133 - 1.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002507 557.0
DYD3_k127_3932840_1 PFAM Aminotransferase class I and II K04720 - 4.1.1.81 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000205 344.0
DYD3_k127_3932840_2 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation K02232 - 6.3.5.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002557 287.0
DYD3_k127_3932840_3 Lrp/AsnC ligand binding domain K03718 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002897 254.0
DYD3_k127_3932840_4 Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding K04798 - - 0.0000000000000000000000000000000000000001154 153.0
DYD3_k127_3932840_5 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 - 6.3.1.10 0.000000000000000001861 89.0
DYD3_k127_3947827_0 COG3546 Mn-containing catalase K07217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002953 398.0
DYD3_k127_3947827_1 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source K01916,K01950 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.1.5,6.3.5.1 0.00000000000000000000000000000000000000000000000000000000009197 212.0
DYD3_k127_3954447_0 4Fe-4S single cluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003079 538.0
DYD3_k127_3954447_1 Electron transfer flavoprotein domain K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007141 402.0
DYD3_k127_3954447_2 Electron transfer flavoprotein domain K03522 - - 0.000000000000000000000000000000000000000000000000000000000000000000007781 238.0
DYD3_k127_396814_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K01845 - 5.4.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008279 521.0
DYD3_k127_396814_1 MiaB-like tRNA modifying enzyme K15865 - 2.8.4.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002445 502.0
DYD3_k127_397403_0 Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules K04483 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000207 435.0
DYD3_k127_397403_1 Protein of unknown function (DUF655) K07572 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003924 280.0
DYD3_k127_397403_2 Belongs to the precorrin methyltransferase family K02303 - 2.1.1.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008988 282.0
DYD3_k127_397403_3 Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family K02528 - 2.1.1.182 0.000000000000000000000000000000000000000000000000001652 190.0
DYD3_k127_397403_4 Uroporphyrinogen-III synthase HemD K01719 - 4.2.1.75 0.00000000000000000000000000000000000003271 153.0
DYD3_k127_397403_5 RNA polymerase Rpb4 K03051 - 2.7.7.6 0.000000000000000000000000000000002147 131.0
DYD3_k127_397403_6 Belongs to the eukaryotic ribosomal protein eL21 family K02889 - - 0.00000000000000000000000000000001275 128.0
DYD3_k127_3996317_0 Protein of unknown function DUF45 K07043 - - 0.00000000000000000000000000000000000000000000000002103 188.0
DYD3_k127_3996317_1 PFAM periplasmic copper-binding - - - 0.0000000000000000000000000000000001104 146.0
DYD3_k127_3996317_2 Laminin G domain - - - 0.000000000000003616 87.0
DYD3_k127_3996317_4 AhpC/TSA family - - - 0.00000001956 58.0
DYD3_k127_4020801_0 Sodium hydrogen exchanger - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006723 455.0
DYD3_k127_4020801_1 FeS assembly ATPase SufC K09013 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 401.0
DYD3_k127_4020801_2 PFAM ABC-2 type transporter K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002114 318.0
DYD3_k127_4020801_3 Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation K03433 - 3.4.25.1 0.00000000000000000000000000000000000000000000000000000000000001608 217.0
DYD3_k127_4020801_4 Cytidylyltransferase-like K00952 - 2.7.7.1 0.000000000000000000000000000000000000000000000000000000002576 204.0
DYD3_k127_4020801_5 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000004183 151.0
DYD3_k127_4020801_6 PUA domain K07575 - - 0.0000000000000000000000000000015 126.0
DYD3_k127_4020801_7 - K06197 - - 0.000000008964 59.0
DYD3_k127_4081803_0 amino acid K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000317 392.0
DYD3_k127_4081803_1 VIT family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001633 283.0
DYD3_k127_4081803_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000001453 126.0
DYD3_k127_4081803_3 CBS domain - - - 0.0000000000000000000000000004883 119.0
DYD3_k127_4081803_4 Belongs to the universal stress protein A family - - - 0.0000000001068 68.0
DYD3_k127_4081803_5 Domain in cystathionine beta-synthase and other proteins. - - - 0.000007049 49.0
DYD3_k127_4171406_0 Multicopper oxidase K00368 - 1.7.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002344 446.0
DYD3_k127_4171406_1 - - - - 0.000000000000000000000000000000000000000000000000000000006398 209.0
DYD3_k127_4171406_2 - - - - 0.0000000000000000000000000000009598 129.0
DYD3_k127_4172935_0 membrane protein domain - - - 0.000000000000000000000000000000000000000000000005821 177.0
DYD3_k127_4172935_4 response regulator, receiver - - - 0.000001716 55.0
DYD3_k127_4203641_0 Sodium:solute symporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002893 332.0
DYD3_k127_4203641_1 Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes K03622 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.00000000000000000000000000000000001721 138.0
DYD3_k127_4203641_3 - - - - 0.00000000000000000003606 92.0
DYD3_k127_4203641_4 PFAM F5 8 type C domain - - - 0.0001269 48.0
DYD3_k127_4269907_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002856 321.0
DYD3_k127_4269907_1 HELICc2 - - - 0.0000000000000000000000000000000000000000000002327 178.0
DYD3_k127_4269907_2 - - - - 0.0000000000000000000000005039 108.0
DYD3_k127_4325011_0 Oligopeptide/dipeptide transporter, C-terminal region K02032 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001596 269.0
DYD3_k127_4325011_1 Protein of unknown function (DUF521) K09123 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003355 261.0
DYD3_k127_4325011_2 Domain of unknown function (DUF2024) - - - 0.000000000000000000000000000000000000001843 147.0
DYD3_k127_4326678_0 Major Intrinsic Protein K06188 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001841 291.0
DYD3_k127_4326678_1 Methyltransferase type 11 K07755 - 2.1.1.137 0.000000000000000000000000000000000000000000000000000000000000000000000000000005887 268.0
DYD3_k127_4326678_2 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000001477 188.0
DYD3_k127_4326678_3 PFAM Protein-tyrosine phosphatase, low molecular weight K03741 - 1.20.4.1 0.000000000000000000000004276 107.0
DYD3_k127_4326678_4 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.0000000000000000000001459 99.0
DYD3_k127_4326678_5 - - - - 0.0000001528 55.0
DYD3_k127_4329314_0 phosphoglycerate mutase K15635 - 5.4.2.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005702 511.0
DYD3_k127_4329314_1 helix_turn_helix ASNC type K03718 - - 0.000000000000000000000000000000000000000000000000000000000000006531 218.0
DYD3_k127_4329314_2 Transcriptional regulator K07108 - - 0.000000000000000000000000000000000000000000000000000007542 192.0
DYD3_k127_4329314_3 ATP synthase (F/14-kDa) subunit K02122 - - 0.000000000000000000000000000000000000000003891 156.0
DYD3_k127_434241_0 Belongs to the DegT DnrJ EryC1 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007053 444.0
DYD3_k127_434241_1 PFAM 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002134 336.0
DYD3_k127_4345942_0 Luciferase-like monooxygenase K14728 - - 2.458e-213 664.0
DYD3_k127_4345942_1 exonuclease of the beta-lactamase fold involved in RNA processing K07577 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001635 358.0
DYD3_k127_4345942_2 Acylphosphatase K01512 - 3.6.1.7 0.00000003595 56.0
DYD3_k127_4350705_0 FAD linked - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006747 457.0
DYD3_k127_4350705_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000001369 235.0
DYD3_k127_4352117_0 Belongs to the PdaD family K02626 - 4.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 322.0
DYD3_k127_4352117_1 - - - - 0.000000000000000000000000003608 115.0
DYD3_k127_4352117_2 - - - - 0.00000000000000001667 87.0
DYD3_k127_4352117_3 COG2931 RTX toxins and related Ca2 -binding - - - 0.00005188 48.0
DYD3_k127_4357936_0 AAA-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002616 481.0
DYD3_k127_4357936_1 NurA - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000468 326.0
DYD3_k127_4362775_0 COG1653 ABC-type sugar transport system, periplasmic component K02027 - - 0.0000000000000000000000000000000000000000000000001004 187.0
DYD3_k127_4362775_1 Mediates influx of magnesium ions K03284 - - 0.0000000000000000000000000002048 126.0
DYD3_k127_4362775_2 PFAM Glycosyl transferases group 1 - - - 0.0000000000000000003015 91.0
DYD3_k127_4362775_3 response regulator, receiver - - - 0.00000000000000008135 84.0
DYD3_k127_4363010_0 Fumarase C C-terminus K01744 - 4.3.1.1 2.634e-209 659.0
DYD3_k127_4363010_1 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003369 413.0
DYD3_k127_4363010_2 Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000000000000000000000000000001058 214.0
DYD3_k127_4363010_3 antibiotic catabolic process K18235 - - 0.000000000000000007646 88.0
DYD3_k127_4396673_0 DHHA1 domain K07463 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001427 291.0
DYD3_k127_4396673_1 ribosomal protein K02956 - - 0.0000000000000000000000000000000000000000000000000000002704 196.0
DYD3_k127_4396673_2 - - - - 0.0000000000000000000000000000000000001305 142.0
DYD3_k127_4396673_3 Belongs to the SUI1 family K03113 - - 0.0000000000000000000000000000000009226 130.0
DYD3_k127_4400401_0 Succinyl-CoA ligase like flavodoxin domain K18594 - - 0.0 1070.0
DYD3_k127_4400401_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 4.757e-217 679.0
DYD3_k127_4400401_2 ubiE/COQ5 methyltransferase family K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009644 269.0
DYD3_k127_4400401_3 Iron-sulfur cluster assembly accessory protein K13628 - - 0.0000000000000000000000000000000000000000000000000000000006126 204.0
DYD3_k127_4400401_4 Toprim domain - - - 0.0000000000000000005717 91.0
DYD3_k127_4400401_5 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.0000000004737 64.0
DYD3_k127_4400401_6 ferredoxin - - - 0.00000003855 57.0
DYD3_k127_4400401_7 Transcriptional regulator - - - 0.0006441 47.0
DYD3_k127_440114_0 adenylosuccinate lyase K01756 - 4.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 481.0
DYD3_k127_440114_1 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004229 362.0
DYD3_k127_440114_2 Asparagine synthase K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000003971 244.0
DYD3_k127_4422053_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 - 6.1.1.15 1.799e-204 646.0
DYD3_k127_4422053_1 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source K01916 - 6.3.1.5 0.000000000000000000000000000000000000000000000000000000000004331 216.0
DYD3_k127_4422053_2 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000003903 194.0
DYD3_k127_4422053_3 SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000001651 155.0
DYD3_k127_4422053_4 - - - - 0.00000000000000000000000000000000002565 137.0
DYD3_k127_4422053_5 negative regulation of IRE1-mediated unfolded protein response K09515 GO:0001775,GO:0002376,GO:0002377,GO:0002440,GO:0002520,GO:0002521,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005783,GO:0005788,GO:0005789,GO:0006508,GO:0006511,GO:0006807,GO:0006950,GO:0006986,GO:0007154,GO:0007165,GO:0007275,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009966,GO:0009968,GO:0009987,GO:0010033,GO:0010243,GO:0010498,GO:0010646,GO:0010648,GO:0012505,GO:0016020,GO:0019538,GO:0019941,GO:0023051,GO:0023052,GO:0023057,GO:0030097,GO:0030098,GO:0030154,GO:0030163,GO:0030183,GO:0030433,GO:0030544,GO:0030968,GO:0031072,GO:0031974,GO:0031981,GO:0031984,GO:0032501,GO:0032502,GO:0033554,GO:0034620,GO:0034976,GO:0035966,GO:0035967,GO:0036498,GO:0036503,GO:0042113,GO:0042175,GO:0042221,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045321,GO:0046649,GO:0048513,GO:0048519,GO:0048523,GO:0048534,GO:0048583,GO:0048585,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051087,GO:0051603,GO:0051716,GO:0051787,GO:0065007,GO:0070013,GO:0070887,GO:0071310,GO:0071704,GO:0080134,GO:0080135,GO:0098827,GO:1900101,GO:1900102,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1903573,GO:1903894,GO:1903895,GO:1905897 - 0.0000000000000001412 84.0
DYD3_k127_4422053_6 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.0000000000001187 71.0
DYD3_k127_4424147_0 F5/8 type C domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001449 273.0
DYD3_k127_4424147_1 - - - - 0.0000000000000000000000000000000003639 139.0
DYD3_k127_4424147_2 Calcineurin-like phosphoesterase - - - 0.0000000000000003551 93.0
DYD3_k127_443549_0 SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000004599 182.0
DYD3_k127_443549_1 Belongs to the glycosyl hydrolase 5 (cellulase A) family K05991 - 3.2.1.123 0.000000001682 70.0
DYD3_k127_443549_2 polysaccharide catabolic process K05991 - 3.2.1.123 0.0001041 55.0
DYD3_k127_4490783_0 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues K01299 GO:0003674,GO:0003824,GO:0004180,GO:0004181,GO:0005488,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0016787,GO:0019538,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0046872,GO:0046914,GO:0050897,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.17.19 1.639e-266 826.0
DYD3_k127_4490783_1 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006257 298.0
DYD3_k127_4490783_2 - - - - 0.000000000006684 73.0
DYD3_k127_4492208_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003539 295.0
DYD3_k127_4492208_1 protein conserved in archaea - - - 0.0000000000002633 73.0
DYD3_k127_4493267_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002084 312.0
DYD3_k127_4493267_1 Anaerobic ribonucleoside-triphosphate reductase K21636 - 1.1.98.6 0.000000000000000000000000000000000000000000000000000000000000000000001257 251.0
DYD3_k127_4521415_0 aspartate carbamoyltransferase K00609 - 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000221 437.0
DYD3_k127_4521415_1 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008347 348.0
DYD3_k127_4521415_3 Amino acid kinase family K00928 - 2.7.2.4 0.0000000000000007925 78.0
DYD3_k127_4585906_0 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 367.0
DYD3_k127_4585906_1 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001551 273.0
DYD3_k127_4585906_2 - - - - 0.000000000000000000000000000000000000000000001548 171.0
DYD3_k127_4585906_3 Cell division protein 48 (CDC48), domain 2 K13525 - - 0.0001028 45.0
DYD3_k127_4587637_0 von Willebrand factor (vWF) type A domain - - - 8.697e-201 638.0
DYD3_k127_4587637_1 von Willebrand factor, type A K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005748 437.0
DYD3_k127_4587637_2 Transketolase, pyrimidine binding domain K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003842 420.0
DYD3_k127_4587637_3 ATPase family associated with various cellular activities (AAA) K04748 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004371 384.0
DYD3_k127_4587637_4 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001724 337.0
DYD3_k127_4587637_5 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.0000000000007043 73.0
DYD3_k127_4596597_0 Radical SAM - - - 3.878e-311 956.0
DYD3_k127_4596597_1 oxidoreductase FAD NAD(P)-binding K00528 - 1.18.1.2,1.19.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001829 497.0
DYD3_k127_4596597_2 - - - - 0.0000000000000000000000000000000000000000004396 159.0
DYD3_k127_4598596_0 Catalyzes the reversible interconversion of serine and glycine with a modified folate serving as the one-carbon carrier. Also exhibits a pteridine-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001737 544.0
DYD3_k127_4598596_1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins K03294 - - 0.00005127 46.0
DYD3_k127_4602014_0 Glyoxalase-like domain K01759 - 4.4.1.5 0.00000000000000000000000000001839 121.0
DYD3_k127_4602014_2 Thiamine-binding protein - - - 0.000000006051 59.0
DYD3_k127_4602014_3 Thiamine-binding protein - - - 0.000703 42.0
DYD3_k127_4602315_0 Oligosaccharyl transferase STT3 subunit K07151 - 2.4.99.18 0.0 1036.0
DYD3_k127_4602315_1 Deoxyhypusine synthase K00809 - 2.5.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002245 374.0
DYD3_k127_4611168_0 Possesses two activities a DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3'- to 5'-direction. Has a template-primer preference which is characteristic of a replicative DNA polymerase K02322 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006357 484.0
DYD3_k127_4611168_1 Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P). This reaction is the first ether-bond-formation step in the biosynthesis of archaeal membrane lipids K17104 - 2.5.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004215 334.0
DYD3_k127_4611168_2 - - - - 0.000000000000000007688 88.0
DYD3_k127_4611168_3 - - - - 0.000000000000002524 83.0
DYD3_k127_4611168_4 - - - - 0.00000001672 60.0
DYD3_k127_4679411_0 Chlorophyllase K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000001363 256.0
DYD3_k127_4679411_1 - - - - 0.00000000000000000000000000000000000000001968 158.0
DYD3_k127_4679411_2 Cupin - - - 0.0000000000000000001332 93.0
DYD3_k127_4709961_0 Type III restriction enzyme, res subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000164 473.0
DYD3_k127_4709961_1 Type III restriction enzyme, res subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001383 281.0
DYD3_k127_4709961_2 uracil-DNA glycosylase K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000001091 239.0
DYD3_k127_4709961_3 Zn-dependent hydrolases of the beta-lactamase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000004981 237.0
DYD3_k127_4709961_4 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000004959 132.0
DYD3_k127_4709961_5 Nucleotide binding protein, PINc K07158 - - 0.00000000000000000000000003801 111.0
DYD3_k127_4709961_6 Oligosaccharyl transferase STT3 subunit K07151 - 2.4.99.18 0.0000000000002871 70.0
DYD3_k127_4721962_0 Mg2 transporter protein K03284 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003195 314.0
DYD3_k127_4721962_1 RNA methylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003311 306.0
DYD3_k127_4721962_2 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02259 - - 0.0000000000000000003652 93.0
DYD3_k127_4721962_3 Mg2 transporter protein K03284 - - 0.00000000000002011 75.0
DYD3_k127_4721962_4 - - - - 0.00000001132 58.0
DYD3_k127_4721962_5 hydrolase (HAD superfamily) K01091,K01560,K01561,K07025 - 3.1.3.18,3.8.1.2,3.8.1.3 0.0000002055 54.0
DYD3_k127_4727660_0 Catalyzes two subsequent steps in gluconeogenesis the aldol condensation of dihydroxyacetone phosphate (DHAP) and glyceraldehyde-3-phosphate (GA3P) to fructose-1,6-bisphosphate (FBP), and the dephosphorylation of FBP to fructose-6-phosphate (F6P) K01622 - 3.1.3.11,4.1.2.13 1.691e-208 652.0
DYD3_k127_4727660_1 Oligopeptide/dipeptide transporter, C-terminal region K02031 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009182 346.0
DYD3_k127_4727660_2 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000002537 218.0
DYD3_k127_4727660_3 Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB) K03124 - - 0.00000000000000000000000000000000000000000769 162.0
DYD3_k127_4727660_4 Transcription elongation factor - - - 0.000003223 51.0
DYD3_k127_4791507_0 COGs COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000328 228.0
DYD3_k127_4791507_1 Peptidase dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000005582 196.0
DYD3_k127_4791507_2 S-layer homology domain - - - 0.000000002077 69.0
DYD3_k127_4805522_0 Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA K03265 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001773 470.0
DYD3_k127_4805522_1 Helix-turn-helix XRE-family like proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006168 258.0
DYD3_k127_4805522_2 serine-type endopeptidase activity K00505,K01342,K02035 - 1.14.18.1,3.4.21.62 0.0000000000000000000000000007718 123.0
DYD3_k127_4805522_3 - - - - 0.000000000000007458 81.0
DYD3_k127_4805522_4 PFAM tRNA synthetases class I (C) catalytic domain K01883 - 6.1.1.16 0.000000000002088 70.0
DYD3_k127_48341_0 Belongs to the complex I 49 kDa subunit family K00333 - 1.6.5.3 1.083e-232 722.0
DYD3_k127_48341_1 NADH dehydrogenase K00337 - 1.6.5.3 9.426e-218 681.0
DYD3_k127_48341_2 NADH ubiquinone oxidoreductase 27 kD subunit K00332 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000002167 231.0
DYD3_k127_48341_3 Belongs to the complex I 20 kDa subunit family K00331 - 1.6.5.3 0.000000000000000000001446 93.0
DYD3_k127_48341_4 4Fe-4S binding domain K00338 - 1.6.5.3 0.00000000000000004616 83.0
DYD3_k127_4845501_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 9.353e-204 649.0
DYD3_k127_4845501_1 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008228 419.0
DYD3_k127_4845501_2 oxidoreductase FAD NAD(P)-binding K00528 - 1.18.1.2,1.19.1.1 0.0000000000000000000000000000000000000000000000000003214 188.0
DYD3_k127_4845501_3 Belongs to the FPP GGPP synthase family K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.00000000000000000000002322 106.0
DYD3_k127_4871880_0 DNA-directed RNA polymerase, alpha subunit 40 kD subunit K03047 - 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003194 310.0
DYD3_k127_4871880_1 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.0000000000000000000000000000000000000000000000000000000000002318 214.0
DYD3_k127_4871880_2 ribosomal protein K02883 - - 0.000000000000000000000000000000000000000005076 156.0
DYD3_k127_4871880_3 - - - - 0.000000000000000832 80.0
DYD3_k127_4871880_4 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.00000000000001318 75.0
DYD3_k127_4885483_0 PFAM Radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001549 329.0
DYD3_k127_4885483_1 - - - - 0.00000000000000005387 84.0
DYD3_k127_4885483_2 - - - - 0.000000000006074 68.0
DYD3_k127_4891479_0 Purple acid Phosphatase, N-terminal domain - - - 0.000000000000000000002235 106.0
DYD3_k127_4891479_1 zinc finger - - - 0.000000000008711 66.0
DYD3_k127_4894958_0 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002356 393.0
DYD3_k127_4894958_1 Transcriptional regulator - - - 0.0000005483 56.0
DYD3_k127_4894958_2 PFAM Circadian clock protein KaiC - - - 0.0001186 54.0
DYD3_k127_4906974_0 MGS-like domain K01955 - 6.3.5.5 7.586e-246 769.0
DYD3_k127_4907758_0 PFAM Ferritin, Dps family protein K02217 - 1.16.3.2 0.0000000000000000000000003917 107.0
DYD3_k127_4907758_1 PFAM periplasmic copper-binding - - - 0.0000000000000000000000007776 110.0
DYD3_k127_4907758_2 transcriptional regulators - - - 0.000000000000000002097 88.0
DYD3_k127_4936332_0 malic enzyme K00027,K00029 - 1.1.1.38,1.1.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002486 563.0
DYD3_k127_4936332_2 Creatinine amidohydrolase K01470 - 3.5.2.10 0.0000000001101 63.0
DYD3_k127_4948016_0 Pyruvate ferredoxin oxidoreductase beta subunit C terminal K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009804 499.0
DYD3_k127_4948016_1 pyruvate flavodoxin ferredoxin oxidoreductase K00174 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004687 398.0
DYD3_k127_4948016_2 DHHA1 domain K07463 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002773 395.0
DYD3_k127_4948016_4 - - - - 0.00000000000000003022 81.0
DYD3_k127_4948016_7 - - - - 0.0000000004214 60.0
DYD3_k127_4998956_0 elongation factor Tu - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001037 284.0
DYD3_k127_4998956_1 Domain of unknown function (DUF4443) - - - 0.00000000000000000000000000000000000000000000000000000000000000000001 239.0
DYD3_k127_5059109_0 TIGRFAM poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit K03821 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002897 419.0
DYD3_k127_5059109_1 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 320.0
DYD3_k127_5059109_2 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000001281 218.0
DYD3_k127_5059109_3 COG2002 Regulators of stationary sporulation gene expression - - - 0.000000000000000000000000000007311 121.0
DYD3_k127_5073260_0 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004904 609.0
DYD3_k127_5073260_1 Part of the Rad50 Mre11 complex, which is involved in the early steps of DNA double-strand break (DSB) repair. The complex may facilitate opening of the processed DNA ends to aid in the recruitment of HerA and NurA. Mre11 binds to DSB ends and has both double-stranded 3'-5' exonuclease activity and single- stranded endonuclease activity K03547 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006264 308.0
DYD3_k127_5073260_2 - - - - 0.0000000000000000000003775 98.0
DYD3_k127_5092378_0 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009367 571.0
DYD3_k127_5092378_1 Lysine biosynthesis K05827 - 6.3.2.43 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008614 373.0
DYD3_k127_5092378_2 Cobalamin B12-binding domain protein - - - 0.000000000000000000000000000000000000000000000002062 182.0
DYD3_k127_5092378_3 lysine biosynthesis protein LysW K05826 - - 0.000000000000000000002658 94.0
DYD3_k127_5099927_0 DNA methylase K00571,K00590 - 2.1.1.113,2.1.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003054 453.0
DYD3_k127_5099927_1 - - - - 0.0000000000000000000000000000009113 122.0
DYD3_k127_5099927_2 Catalyzes the oxidative deamination and cyclization of 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonic acid (ADH) to yield 3- dehydroquinate (DHQ), which is fed into the canonical shikimic pathway of aromatic amino acid biosynthesis K11646 - 1.4.1.24 0.00000000000000000005648 90.0
DYD3_k127_5099927_3 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.00000002864 66.0
DYD3_k127_512471_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K03234 - - 0.0 1274.0
DYD3_k127_512471_2 cation diffusion facilitator family transporter - - - 0.0000000008426 60.0
DYD3_k127_5146409_0 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000132 363.0
DYD3_k127_5146409_1 - - - - 0.00000000000000000000000000000000000000000000001227 174.0
DYD3_k127_5146409_2 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.0000000000000000000001256 99.0
DYD3_k127_5146409_3 pfkB family carbohydrate kinase - - - 0.0000000000000000000003046 97.0
DYD3_k127_5146409_4 - - - - 0.000000000000000002126 88.0
DYD3_k127_5146409_5 - - - - 0.0000000000000002345 83.0
DYD3_k127_5149220_0 PHP-associated - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 381.0
DYD3_k127_5149220_1 Phosphate uptake regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006991 252.0
DYD3_k127_5149220_2 Staphylococcal nuclease homologue - - - 0.000000000000000005331 91.0
DYD3_k127_5149220_3 cellular component assembly - - - 0.00000000000005958 74.0
DYD3_k127_5151539_0 PFAM NHL repeat containing protein - - - 0.000000000000000000000000000000000000000000000000000000000009071 219.0
DYD3_k127_5151539_1 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000000000000000000005097 203.0
DYD3_k127_5151539_2 Belongs to the Dps family K04047 - - 0.00000000000000000000000000000000000000000004584 166.0
DYD3_k127_5151539_3 Cyclophilin-like K09143 - - 0.0000000000000000000000000000000007235 134.0
DYD3_k127_5151539_4 glucosylceramidase activity - - - 0.000000000000000000000000001319 115.0
DYD3_k127_5151539_5 Purple acid Phosphatase, N-terminal domain - - - 0.000000000000000000001951 107.0
DYD3_k127_5159643_0 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008912 366.0
DYD3_k127_5159643_1 Glycogen debranching enzyme K01194 - 3.2.1.28 0.00000000000000000000000000000000000000000000000000000000007873 213.0
DYD3_k127_5159643_2 - - - - 0.0000000000000000000000000006076 116.0
DYD3_k127_5159643_3 COG0665 Glycine D-amino acid oxidases (deaminating) - - - 0.0000000000000000002331 90.0
DYD3_k127_5176358_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000548 485.0
DYD3_k127_5176358_1 ATPase family associated with various cellular activities (AAA) K04800 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008423 286.0
DYD3_k127_51789_0 Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB) K03124 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 407.0
DYD3_k127_51789_1 Universal stress protein - - - 0.000000000001361 67.0
DYD3_k127_51789_2 Peptidase M10A and M12B matrixin and adamalysin - - - 0.000000000165 64.0
DYD3_k127_5196071_0 Belongs to the class-I aminoacyl-tRNA synthetase family K04566 - 6.1.1.6 5.829e-210 665.0
DYD3_k127_5196071_1 Histone acetyltransferase K07739 - 2.3.1.48 5.413e-194 618.0
DYD3_k127_5201951_0 Ribosomal protein L15E K02877 - - 0.000000000000000000000000000000000000000000000000000000000000000000006466 237.0
DYD3_k127_5201951_1 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000007132 147.0
DYD3_k127_5201951_2 Signal peptidase K13280 - 3.4.21.89 0.0000000000000000000000000000000000001172 148.0
DYD3_k127_5201951_3 - - - - 0.000000000000000000000000006367 114.0
DYD3_k127_5201951_4 of nitrite reductase and ring-hydroxylating K05710 - - 0.0000000000000000000000012 104.0
DYD3_k127_5204717_0 phosphoserine phosphatase K01079 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007324 317.0
DYD3_k127_5204717_1 Type III restriction enzyme, res subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000001337 236.0
DYD3_k127_5224433_0 AMP-binding enzyme C-terminal domain K01895 - 6.2.1.1 5.741e-301 934.0
DYD3_k127_5224433_1 NADH ubiquinone oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000001742 217.0
DYD3_k127_5224433_2 Uncharacterized ACR, COG1430 K09005 - - 0.00000000000000000000000000000000000000000000000000002047 192.0
DYD3_k127_5224433_3 - - - - 0.00000000000000000000000000000000000000008785 153.0
DYD3_k127_5224433_4 - - - - 0.00000000000000000000000115 105.0
DYD3_k127_5243495_0 NAD(P)H-dependent FMN reductase K00299 - 1.5.1.38 0.000000000000000000000000000000000000000000000000000000000000001507 224.0
DYD3_k127_5243495_1 protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.000000000002052 70.0
DYD3_k127_5244119_0 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000008491 224.0
DYD3_k127_5244119_1 Calcineurin-like phosphoesterase - - - 0.0000000000000000003296 92.0
DYD3_k127_5249677_0 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000468 370.0
DYD3_k127_5249677_1 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000002112 206.0
DYD3_k127_5249677_2 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000002993 108.0
DYD3_k127_5252040_0 CBS domain - - - 0.00000000000000000000000000000000000009605 152.0
DYD3_k127_5252040_1 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.0000000000000000000000000000000000001854 145.0
DYD3_k127_5252040_2 Universal stress protein - - - 0.0000000000000000696 82.0
DYD3_k127_5269370_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002015 544.0
DYD3_k127_5269370_1 GTPase of unknown function C-terminal K06942 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 349.0
DYD3_k127_5269370_2 PFAM 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001467 317.0
DYD3_k127_5269370_3 Nitrogen regulatory protein P-II - - - 0.0003276 44.0
DYD3_k127_5280333_0 COG2133 Glucose sorbosone dehydrogenases K21430 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002325 302.0
DYD3_k127_5280333_1 glycosyl transferase family 2 K00721 - 2.4.1.83 0.0000000000000000000000000000000296 128.0
DYD3_k127_5280333_2 glycosyl transferase family 2 K00721 - 2.4.1.83 0.0000001395 55.0
DYD3_k127_5319414_0 Isocitrate isopropylmalate dehydrogenase K00031 - 1.1.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004717 527.0
DYD3_k127_5319414_1 - - - - 0.000000000000000000000000000000000000000000000000000000008486 203.0
DYD3_k127_5319414_2 Methyltransferase small domain K02493 - 2.1.1.297 0.000000000000000000000000000000000005273 143.0
DYD3_k127_5319414_3 Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family K02528 - 2.1.1.182 0.00005622 48.0
DYD3_k127_5329115_0 Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758 - 4.2.1.136 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000878 286.0
DYD3_k127_5329115_1 Radical SAM K04069 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000001837 252.0
DYD3_k127_5335107_0 Cytochrome b subunit of the bc complex K00412 - - 1.307e-217 677.0
DYD3_k127_5335107_1 thioesterase - - - 0.00000000000000000000000000000000000000000000002015 173.0
DYD3_k127_5335107_2 Binds to the 23S rRNA K02929 - - 0.00000000000000000000000003932 108.0
DYD3_k127_5335107_3 PFAM Rieske 2Fe-2S domain - - - 0.0000000005288 68.0
DYD3_k127_5383140_0 DNA polymerase K02319 - 2.7.7.7 0.0 1195.0
DYD3_k127_5383140_1 Belongs to the arginase family K01480 - 3.5.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007537 412.0
DYD3_k127_5383140_2 Belongs to the class-II aminoacyl-tRNA synthetase family K01868 - 6.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007313 325.0
DYD3_k127_5383140_3 - - - - 0.000000000000000000000008215 101.0
DYD3_k127_5385199_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001936 531.0
DYD3_k127_5385199_1 Indole-3-glycerol phosphate synthase K01609 - 4.1.1.48 0.0000000000000000000000000000000000000000000000000000000009362 206.0
DYD3_k127_5395203_0 Catalytic component of the exosome, which is a complex involved in RNA degradation. Has 3'- 5' exoribonuclease activity. Can also synthesize heteropolymeric RNA-tails K11600 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003406 395.0
DYD3_k127_5395203_1 Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Contributes to the structuring of the Rrp41 active site K12589 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 361.0
DYD3_k127_5395203_2 Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Confers strong poly(A) specificity to the exosome K03679 - - 0.0000000000000000000000000000000000000000004911 161.0
DYD3_k127_5395203_3 Ribosomal L37ae protein family K02921 - - 0.0000000000000000000001426 98.0
DYD3_k127_5400790_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004831 452.0
DYD3_k127_5400790_1 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006372 361.0
DYD3_k127_5400790_2 pfkB family carbohydrate kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009253 261.0
DYD3_k127_5400790_3 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17884 - 2.7.8.39 0.0000000000000000000000000000000000000000000000000002191 191.0
DYD3_k127_5400790_4 ribosomal protein K02976 - - 0.0000000000000000000000000000000000000000000003329 167.0
DYD3_k127_5400790_5 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000003418 90.0
DYD3_k127_5400790_6 Zinc-dependent metalloprotease - - - 0.00003575 53.0
DYD3_k127_5407438_0 COG1522 Transcriptional regulators - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004599 426.0
DYD3_k127_5407438_2 - - - - 0.0000000000000000007329 93.0
DYD3_k127_54484_0 ATP-grasp domain K01903 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001863 483.0
DYD3_k127_54484_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000002509 219.0
DYD3_k127_54484_2 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex - - - 0.000000000000000000000000000000000000003071 147.0
DYD3_k127_54484_3 - - - - 0.00000000000000000005136 94.0
DYD3_k127_5465782_0 PFAM Glycosidase K20885 - 2.4.1.339,2.4.1.340 0.000000000000000000000000000000000000000000000000000000000000000000000000000001548 273.0
DYD3_k127_5465782_1 Bacterial-like globin K06886 - - 0.0000000000000000000000000000000000000164 151.0
DYD3_k127_5465782_2 Pfam Zn-finger in ubiquitin-hydrolases and other protein K03455 - - 0.00000000000000000000000000000000001096 137.0
DYD3_k127_5465782_3 Acetyltransferase (GNAT) domain - - - 0.00000000000000002105 89.0
DYD3_k127_5472006_0 Catalyzes the release of L-lysine from LysW -gamma-L- lysine and the release of L-ornithine from LysW -L-ornithine K05831 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 557.0
DYD3_k127_5472006_1 HMGL-like K01649 - 2.3.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004175 441.0
DYD3_k127_5472006_2 Lysine biosynthesis K05827 - 6.3.2.43 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008865 388.0
DYD3_k127_5472006_3 diphthine synthase K20215 - 2.1.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 344.0
DYD3_k127_5472006_4 protein (ATP-grasp superfamily) K07159 - - 0.0000000000000000000000000000000000000000000000756 173.0
DYD3_k127_5472006_5 COG1599 Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins K07466 - - 0.000000000000000000000001647 104.0
DYD3_k127_5472006_6 lysine biosynthesis protein LysW K05826 - - 0.000000000000000000000303 96.0
DYD3_k127_5472006_7 protein (ATP-grasp superfamily) K07159 - - 0.0000000000000000001182 91.0
DYD3_k127_5472006_8 CHRD domain - - - 0.000001165 58.0
DYD3_k127_5475868_0 PFAM Nitroreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002776 309.0
DYD3_k127_5475868_1 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001179 297.0
DYD3_k127_5475868_2 - - - - 0.00000000000000000000000000000006841 128.0
DYD3_k127_5475868_3 - - - - 0.000000000000005234 81.0
DYD3_k127_5476249_0 Domain of unknown function (DUF1297) K06863 - 6.3.4.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002721 478.0
DYD3_k127_5476249_1 Transfers a mannosyl group from GDP-mannose to phosphoglycerate to form mannosyl-3-phosphoglycerate (MPG) K05947 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.4.1.217 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005104 311.0
DYD3_k127_5476249_2 Bifunctional nuclease K08999 - - 0.00000000000000000000000000000000000000000000000000000004259 199.0
DYD3_k127_5476249_3 - - - - 0.000000000000000000000000000000000000000000000000006979 190.0
DYD3_k127_5480318_0 COG0330 Membrane protease subunits stomatin prohibitin homologs - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 424.0
DYD3_k127_5480318_1 Chorismate mutase type II K14170 - 4.2.1.51,5.4.99.5 0.000000000000000000000000000000000000003108 149.0
DYD3_k127_5480318_2 - - - - 0.00000000000000000000000002659 114.0
DYD3_k127_5480318_3 - - - - 0.00000000000000000000000003818 113.0
DYD3_k127_5488971_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000003576 241.0
DYD3_k127_5488971_1 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) K05967 - - 0.0000000000000000000000000000000000000000000000000000000000000003854 224.0
DYD3_k127_5488971_2 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes K01515 - 3.6.1.13 0.00000000000000000000000000000000000000000000000004045 183.0
DYD3_k127_5488971_3 - - - - 0.000000000000000000000000000000000000000000002954 168.0
DYD3_k127_5488971_4 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.0000000000000000000000000003249 116.0
DYD3_k127_5496722_0 Fibronectin-binding protein A N-terminus (FbpA) - - - 9.672e-204 655.0
DYD3_k127_5496722_1 Tetrapyrrole (Corrin/Porphyrin) Methylases K05936 - 2.1.1.133,2.1.1.271 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 352.0
DYD3_k127_5496722_2 Tetrapyrrole (Corrin/Porphyrin) Methylases K03394 - 2.1.1.130,2.1.1.151 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001961 303.0
DYD3_k127_5496722_3 CBS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000204 269.0
DYD3_k127_5496722_4 Catalyzes the methylation of C-15 in cobalt-precorrin-6B followed by the decarboxylation of C-12 to form cobalt-precorrin- 7 K02191 - 2.1.1.196 0.000000000000000000000000000000000000000000000000000000000000000000000000004873 257.0
DYD3_k127_5496722_5 Produces ATP from ADP in the presence of a proton gradient across the membrane K02121 - - 0.00000000000000000000000001152 111.0
DYD3_k127_5496722_6 - - - - 0.000000006646 60.0
DYD3_k127_5514998_1 - - - - 0.0000000000000000000003775 98.0
DYD3_k127_5514998_2 protein conserved in archaea K09723 - - 0.0000000000000000004803 89.0
DYD3_k127_5544626_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex - - - 8.664e-204 646.0
DYD3_k127_5544626_1 Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation K03433 - 3.4.25.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004043 294.0
DYD3_k127_5549705_0 Component of the wyosine derivatives biosynthesis pathway that catalyzes the condensation of N-methylguanine with 2 carbon atoms from pyruvate to form the tricyclic 4-demethylwyosine (imG-14) on guanosine-37 of tRNA(Phe) K15449 - 4.1.3.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 548.0
DYD3_k127_5549705_1 Glycosyltransferase family 28 C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002326 372.0
DYD3_k127_5549705_2 NGG1p interacting factor 3 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000622 323.0
DYD3_k127_5549705_3 Sodium/calcium exchanger protein K07300 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002082 289.0
DYD3_k127_5549705_4 Belongs to the HAM1 NTPase family K02428 - 3.6.1.66 0.000000000007246 67.0
DYD3_k127_5549705_5 - - - - 0.00008775 46.0
DYD3_k127_5628080_0 Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family K01428 - 3.5.1.5 3.29e-254 794.0
DYD3_k127_5628080_1 PFAM TCP-1 cpn60 chaperonin family K22447 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0044183,GO:0051082,GO:0061077 - 7.007e-197 630.0
DYD3_k127_5628080_2 ABC-type multidrug transport system, ATPase component K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002383 361.0
DYD3_k127_5628080_3 ABC-2 type transporter K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002513 281.0
DYD3_k127_5628080_4 (urease) gamma subunit K01430 - 3.5.1.5 0.00000000000000000000000000000000000000000000859 164.0
DYD3_k127_5628080_5 Urease beta subunit K01429 - 3.5.1.5 0.0000000000000000000000000000000000000000002858 161.0
DYD3_k127_5631698_0 Proline dehydrogenase K00318 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002576 303.0
DYD3_k127_5631698_1 Aldehyde dehydrogenase family K00294 - 1.2.1.88 0.000000000000000000000000000000000000000000000000000000000000000000001045 242.0
DYD3_k127_5634449_0 UbiD family decarboxylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000732 538.0
DYD3_k127_5634449_1 Contacts the emerging nascent chain on the ribosome K03626 - - 0.000000000000000000000000000000000000000000000002426 174.0
DYD3_k127_5634449_3 - - - - 0.00000000000000000000000000000000000007571 149.0
DYD3_k127_5634449_5 H subunit K02107 - - 0.000000000000000002009 88.0
DYD3_k127_5634449_6 - - - - 0.000000000000002927 80.0
DYD3_k127_5647278_0 Phosphatase K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000005728 192.0
DYD3_k127_5647278_1 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.000000000000000000000000000000000000000000000008542 174.0
DYD3_k127_5647278_2 COG0346 Lactoylglutathione lyase and related lyases K00457 - 1.13.11.27 0.0000000000000000000000000000000187 131.0
DYD3_k127_5647278_3 - - - - 0.0000000000004319 74.0
DYD3_k127_5647278_4 NAD(P)H-dependent FMN reductase K00299 - 1.5.1.38 0.0000001544 53.0
DYD3_k127_5665944_0 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 6.544e-198 621.0
DYD3_k127_5665944_1 - - - - 0.00000000000002491 74.0
DYD3_k127_5665944_2 Dodecin K09165 - - 0.00000000001935 68.0
DYD3_k127_5665944_3 - - - - 0.000002359 57.0
DYD3_k127_5714473_0 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 1.829e-206 648.0
DYD3_k127_5714473_1 Asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000178 279.0
DYD3_k127_5737674_0 Membrane protein involved in the export of O-antigen and teichoic acid - - - 0.0000000000000000000000000000000000000000007853 171.0
DYD3_k127_5738359_0 OsmC-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000001645 220.0
DYD3_k127_5751705_0 Chlorite dismutase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000642 339.0
DYD3_k127_5751705_1 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002021 312.0
DYD3_k127_5751705_2 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02472 - 1.1.1.336 0.000000000000000000000000000000000000000000000000000000000000000000000000000009022 271.0
DYD3_k127_5751705_3 Domain of unknown function (DUF1802) - - - 0.0000000000000000000000000000000000000000000000000002101 191.0
DYD3_k127_5751705_4 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.000000000009346 68.0
DYD3_k127_5786421_0 PFAM Methyladenine glycosylase K01246 - 3.2.2.20 0.000000000000000000000000000000000000000000000000000000000000000000000002811 248.0
DYD3_k127_5786421_1 glutamine amidotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000004 216.0
DYD3_k127_5793872_0 integrase family - - - 0.0000000000000000000000000000003412 134.0
DYD3_k127_5793872_1 Protein of unknown function (DUF4242) - - - 0.0000000000000000000000000001414 115.0
DYD3_k127_5794632_0 - - - - 0.000000000000000000006363 104.0
DYD3_k127_5812028_0 PKD domain - - - 0.000000000000000000002667 109.0
DYD3_k127_5812028_1 - - - - 0.00000000009454 68.0
DYD3_k127_5827424_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001527 482.0
DYD3_k127_5827424_1 Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000001012 225.0
DYD3_k127_5827424_2 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.000000000000000000000000000000000000000000000000000004808 196.0
DYD3_k127_5827424_4 - - - - 0.000000000000000000000000000001501 124.0
DYD3_k127_5827424_5 Bacterial Fe(2+) trafficking - - - 0.00000000000000000000000000007321 117.0
DYD3_k127_5827424_6 Zinc finger, C2H2 type - - - 0.000000000000001256 78.0
DYD3_k127_5827424_7 - - - - 0.0000000000002683 76.0
DYD3_k127_583166_0 ABC1 family - - - 2.153e-205 649.0
DYD3_k127_583166_1 Pyridoxamine 5'-phosphate - - - 0.0000000000000000000000000000003863 124.0
DYD3_k127_583166_2 Pyridoxamine 5'-phosphate - - - 0.000000000004048 67.0
DYD3_k127_583166_3 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0004981 44.0
DYD3_k127_5837917_0 DNA polymerase elongation subunit (Family B) K02319 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005274 342.0
DYD3_k127_5837917_1 Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB) K03124 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001825 289.0
DYD3_k127_5837917_2 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000001516 237.0
DYD3_k127_5837917_3 - - - - 0.0000000000004212 74.0
DYD3_k127_5838634_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K13798 - 2.7.7.6 0.0 2105.0
DYD3_k127_5838634_1 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002761 296.0
DYD3_k127_5838634_2 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03053 - 2.7.7.6 0.000000000000000000000000000000000000000028 153.0
DYD3_k127_5838634_3 peptidyl-tyrosine sulfation - - - 0.000000000000000002865 89.0
DYD3_k127_5841257_0 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.00000000000000000000000000000000000000000000000000002378 197.0
DYD3_k127_5841257_1 acid phosphatase activity - - - 0.00000000000000000000000000000000000000000001114 173.0
DYD3_k127_5841257_2 COGs COG0515 Serine threonine protein kinase - - - 0.0000000001971 70.0
DYD3_k127_5841257_3 - - - - 0.0001929 48.0
DYD3_k127_5943170_0 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001545 379.0
DYD3_k127_5943170_3 Bacterial regulatory protein, Fis family K07713 - - 0.000000007383 63.0
DYD3_k127_5943170_5 - - - - 0.0001312 47.0
DYD3_k127_5945977_0 Sulfite reductase K00392 - 1.8.7.1 2.64e-256 799.0
DYD3_k127_5945977_1 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000595 338.0
DYD3_k127_5950979_0 PFAM Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000000006002 181.0
DYD3_k127_5950979_1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K04750 - - 0.0000000000000000000137 93.0
DYD3_k127_5950979_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K04750 - - 0.0000000000000000005004 89.0
DYD3_k127_5950979_3 regulatory protein, arsR - - - 0.000000000000004737 76.0
DYD3_k127_5954516_0 PFAM Multicopper oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008265 484.0
DYD3_k127_5954516_1 PFAM Polyketide cyclase dehydrase and lipid transport - - - 0.0000000000000000000000000000000000000008014 151.0
DYD3_k127_5954516_4 divalent heavy-metal cations transporter - - - 0.00000008886 58.0
DYD3_k127_5957790_0 fumarate reductase flavoprotein K00239 - 1.3.5.1,1.3.5.4 3.621e-292 904.0
DYD3_k127_5957790_1 GTPase of unknown function C-terminal K06942 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002782 609.0
DYD3_k127_5957790_10 Iron-sulfur cluster assembly protein - - - 0.00000000000000000000000000000000000000000000001124 172.0
DYD3_k127_5957790_11 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00242 - - 0.00000000000000000000000000000000000000003411 155.0
DYD3_k127_5957790_12 Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding K04797 - - 0.00000000000000000000000000000000002293 140.0
DYD3_k127_5957790_13 - - - - 0.0000000000000000000004974 95.0
DYD3_k127_5957790_14 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03059 - 2.7.7.6 0.000000000000000000001962 94.0
DYD3_k127_5957790_2 argininosuccinate lyase K01755 - 4.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141 441.0
DYD3_k127_5957790_3 histidyl-tRNA synthetase K01892 - 6.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004492 433.0
DYD3_k127_5957790_4 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002844 385.0
DYD3_k127_5957790_5 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000174 362.0
DYD3_k127_5957790_6 aspartate ornithine carbamoyltransferase carbamoyl-P binding domain K00611 - 2.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003815 358.0
DYD3_k127_5957790_7 phosphohydrolase (DHH superfamily) K07097 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007626 273.0
DYD3_k127_5957790_8 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00241 - - 0.000000000000000000000000000000000000000000000000000000000000000009192 228.0
DYD3_k127_5957790_9 - - - - 0.000000000000000000000000000000000000000000000000000000000001593 214.0
DYD3_k127_5975395_0 PFAM Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004812 493.0
DYD3_k127_5982815_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 1.855e-228 719.0
DYD3_k127_5982815_1 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008976 499.0
DYD3_k127_5982815_2 LAO AO transport system ATPase K07588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002977 281.0
DYD3_k127_5982815_3 B12 binding domain K01849 - 5.4.99.2 0.0000000000000000000000000000000000000000000000000000000000000002203 222.0
DYD3_k127_5982815_4 Cytidylyltransferase-like K00952 - 2.7.7.1 0.00000000000000000000000000000000000000000000000001684 185.0
DYD3_k127_5982815_5 Dual specificity phosphatase, catalytic domain K14165 - 3.1.3.16,3.1.3.48 0.000000000000000000000000000000000000000000000007722 177.0
DYD3_k127_5982815_7 CHRD domain - - - 0.0000000000000000000001489 108.0
DYD3_k127_5982815_8 GYD domain - - - 0.0001133 44.0
DYD3_k127_5986054_0 Alginate lyase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004316 282.0
DYD3_k127_5986054_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000007539 88.0
DYD3_k127_5993950_0 required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 GO:0002949,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.7.7.87 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 350.0
DYD3_k127_5993950_1 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 - 6.3.3.3 0.000000000000000000000000000000000000000000000000000000000001272 217.0
DYD3_k127_5993950_2 PFAM Multicopper oxidase - - - 0.00000000000000000000000000000000000000000000000005179 189.0
DYD3_k127_5993950_3 Transcriptional regulator - - - 0.000000000000000000000005144 104.0
DYD3_k127_60072_0 Peptidase family M3 K08602 - - 5.192e-237 746.0
DYD3_k127_60072_1 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 1.208e-210 659.0
DYD3_k127_60072_2 Deoxyhypusine synthase K00809 - 2.5.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001769 517.0
DYD3_k127_60072_3 ThiF family K21029 - 2.7.7.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001875 490.0
DYD3_k127_60072_4 Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs K07573 - - 0.000000000000000000000000000000000000000000000000000000001471 208.0
DYD3_k127_60072_5 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496 - 3.5.4.19 0.0000000000000000000000000000000000000000000004833 168.0
DYD3_k127_60072_6 FUN14 family - - - 0.00000001557 57.0
DYD3_k127_6017815_0 phenylalanyl-tRNA synthetase, beta subunit K01890 - 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007391 469.0
DYD3_k127_6017815_1 methanogenesis marker protein 1 K09136 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003403 289.0
DYD3_k127_6022751_0 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003702 393.0
DYD3_k127_6022751_1 Methyltransferase type 11 - - - 0.00000000000000000000000000000000000000000000000002619 184.0
DYD3_k127_6040577_0 PP-loop family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007246 394.0
DYD3_k127_6040577_1 - - - - 0.0000000000000000000000000301 108.0
DYD3_k127_6040577_2 helix_turn_helix ASNC type K03718 - - 0.0000000000000000000004346 102.0
DYD3_k127_6044819_0 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003204 407.0
DYD3_k127_6044819_1 Belongs to the MCM family K10726 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003171 329.0
DYD3_k127_6044819_2 Coenzyme PQQ synthesis protein D (PqqD) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002048 318.0
DYD3_k127_6044819_3 PFAM Methyltransferase type K15256 - - 0.0000000000000000000000000000000000000000286 159.0
DYD3_k127_6044819_4 DNA-binding transcription factor activity - - - 0.0000000000000000000000000000000000000002645 155.0
DYD3_k127_6069670_0 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005522 405.0
DYD3_k127_6069670_1 Methyltransferase involved in ribosomal biogenesis. Specifically catalyzes the N1-methylation of the pseudouridine corresponding to position 914 in M.jannaschii 16S rRNA K14568 - 2.1.1.260 0.00000000000000000000000000000000000000000000000007393 185.0
DYD3_k127_6069670_2 Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends K03540 - 3.1.26.5 0.00000000000000000000000002169 111.0
DYD3_k127_6079221_0 Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate K06989 - 1.4.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000009107 265.0
DYD3_k127_6079221_1 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000002137 255.0
DYD3_k127_6079221_2 Tubulin/FtsZ family, GTPase domain K03531 - - 0.0000000000000000000000000000000000000002733 157.0
DYD3_k127_6079221_3 Belongs to the ribosomal protein L31e family K02910 - - 0.0000000000000000000000000000002241 126.0
DYD3_k127_6079221_4 RNA-binding protein contains TRAM domain - - - 0.0000000000000000000000000004455 116.0
DYD3_k127_6079221_5 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000000001405 104.0
DYD3_k127_6079221_6 Ribosomal protein S30 K02983 - - 0.00000000000000000004628 90.0
DYD3_k127_6079221_7 Belongs to the eukaryotic ribosomal protein eL39 family K02924 - - 0.0000000000000000001947 88.0
DYD3_k127_6088534_0 PFAM Multicopper oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001111 293.0
DYD3_k127_6105108_0 DeoC/LacD family aldolase K08321 - 2.3.1.245 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001807 409.0
DYD3_k127_6105108_1 Glucose dehydrogenase C-terminus K00008 - 1.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002894 412.0
DYD3_k127_6105108_2 NOSIC (NUC001) domain K14564 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000255 366.0
DYD3_k127_6105108_3 Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA K04795 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001113 279.0
DYD3_k127_6105108_4 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000004984 214.0
DYD3_k127_6105108_5 Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family K00555 - 2.1.1.215,2.1.1.216 0.000000000000000000000000000000000002143 141.0
DYD3_k127_6105108_6 - - - - 0.00002177 48.0
DYD3_k127_6130261_0 RNA methylase - - - 0.00000000000000000002643 96.0
DYD3_k127_6130261_1 RNA methylase - - - 0.0000000000000959 74.0
DYD3_k127_6130261_2 membrane protein domain - - - 0.000000000001224 68.0
DYD3_k127_6130261_4 RNA methylase - - - 0.00008326 45.0
DYD3_k127_6183902_0 COG0455 ATPases involved in chromosome partitioning K03496,K03609 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 302.0
DYD3_k127_6183902_1 - - - - 0.000000000000000000000000003172 115.0
DYD3_k127_6183902_3 - - - - 0.00000000000000017 80.0
DYD3_k127_6188140_0 cation diffusion facilitator family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008203 378.0
DYD3_k127_6188140_1 - - - - 0.0000007482 53.0
DYD3_k127_6188140_2 COG0784 FOG CheY-like receiver - - - 0.000006674 50.0
DYD3_k127_6197446_0 Phage integrase family - - - 0.000000000000000000000000000000000000000001727 169.0
DYD3_k127_6197446_1 Large-conductance mechanosensitive channel, MscL K03282 - - 0.0000000000000000000000000001294 119.0
DYD3_k127_6197446_2 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000156 112.0
DYD3_k127_6209882_0 MOSC domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000831 280.0
DYD3_k127_6209882_1 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000007891 254.0
DYD3_k127_6220272_0 Vinylacetyl-CoA Delta-isomerase K14534 - 4.2.1.120,5.3.3.3 3.462e-284 877.0
DYD3_k127_6220272_1 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.000000000000000000000000000000000000000000002279 169.0
DYD3_k127_6220272_2 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.00000000000000000000000000000000000000007408 156.0
DYD3_k127_6220272_3 Belongs to the eukaryotic ribosomal protein eL40 family K02927 - - 0.00000000000000000000001976 99.0
DYD3_k127_6220272_4 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.00000000000000000002646 93.0
DYD3_k127_6234734_0 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K03231 - - 1.126e-247 768.0
DYD3_k127_6234734_1 COG0530 Ca2 Na antiporter K07301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 402.0
DYD3_k127_6234734_2 Periplasmic binding protein K02016 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000456 323.0
DYD3_k127_6234734_3 Trypsin-like serine protease with C-terminal PDZ domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004919 301.0
DYD3_k127_6234734_4 Involved in the binding of tRNA to the ribosomes K02946 - - 0.00000000000000000000000000000000000000000000000000002714 188.0
DYD3_k127_6234734_5 Belongs to the class-I aminoacyl-tRNA synthetase family K01870 - 6.1.1.5 0.00000000000000000000000000000000000000000005317 168.0
DYD3_k127_6234734_6 TIGRFAM Mannose-1-phosphate guanylyltransferase mannose-6-phosphate isomerase K00971,K16011 - 2.7.7.13,5.3.1.8 0.00000000000000000000000000000000000007302 145.0
DYD3_k127_6234734_7 Belongs to the small heat shock protein (HSP20) family - - - 0.00000000000000000000000000000001627 130.0
DYD3_k127_6245498_0 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005052 566.0
DYD3_k127_6245498_1 Cobalamin synthesis G C-terminus K02189 - 3.7.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 329.0
DYD3_k127_6245498_2 DNA-directed RNA polymerase K03049 - 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000009323 253.0
DYD3_k127_6245498_3 Belongs to the UPF0218 family K09735 - - 0.0000000000000000000000000000000414 132.0
DYD3_k127_6248393_0 COG2133 Glucose sorbosone dehydrogenases K21430 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002078 304.0
DYD3_k127_6248393_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0042802,GO:0044464,GO:0071944 3.6.3.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001477 286.0
DYD3_k127_6248393_2 - - - - 0.000000003205 60.0
DYD3_k127_6248393_3 COG0784 FOG CheY-like receiver - - - 0.0000003629 57.0
DYD3_k127_6263646_0 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004748 545.0
DYD3_k127_6263646_1 PFAM Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005629 321.0
DYD3_k127_6263646_2 Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.000000000000000000000000000000000000000000000000000000005758 203.0
DYD3_k127_6263646_3 - - - - 0.000000000000000000000000000000000000000000006935 173.0
DYD3_k127_6263646_4 HD domain K07023 - - 0.0000000000000000000000000000000000000000001543 166.0
DYD3_k127_6263646_5 COG1522 Transcriptional regulators - - - 0.0000000000000000000000000000000000003895 141.0
DYD3_k127_6263646_6 Multicopper oxidase - - - 0.00000000000000000000000003367 109.0
DYD3_k127_6263646_7 Purple acid Phosphatase, N-terminal domain - - - 0.0000000000000000000000007722 118.0
DYD3_k127_6263646_9 Hydroxymethylglutaryl-coenzyme A synthase N terminal K01641 - 2.3.3.10 0.00000000004024 64.0
DYD3_k127_6270781_0 glycosyl transferase family 2 K00721 - 2.4.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000009638 273.0
DYD3_k127_6270781_1 - - - - 0.000000000000000000000000000001362 133.0
DYD3_k127_6270781_2 more specifically in 18S rRNA pseudouridylation and in cleavage of pre-rRNA K11130 - - 0.0000000000003621 69.0
DYD3_k127_6270781_3 PQQ-like domain K00114 - 1.1.2.8 0.0000008862 55.0
DYD3_k127_6306667_0 Peptidase inhibitor I9 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004828 304.0
DYD3_k127_6306667_1 - - - - 0.0000000000000000000000000000000000000000000001157 172.0
DYD3_k127_6306667_2 pyridoxamine 5-phosphate K07005 - - 0.000000000000000000000000000000000000000007585 158.0
DYD3_k127_6306667_3 - - - - 0.0000000000000000000000002042 110.0
DYD3_k127_6306667_5 SnoaL-like polyketide cyclase - - - 0.000000000000007306 78.0
DYD3_k127_6306667_6 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000002768 75.0
DYD3_k127_6306667_7 - - - - 0.0000000001046 63.0
DYD3_k127_632007_0 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.000000000000000000000000000000000000000000000000000000000000000000003138 237.0
DYD3_k127_632007_1 Transcription elongation factor Spt5 K02601 - - 0.00000000000000000000000000000000000000000000000000000000000000000003796 237.0
DYD3_k127_632007_2 Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3-diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2,3-di-O-phytanyl-sn-glyceryl phosphate) from 2,3-di-O-geranylgeranylglyceryl phosphate (DGGGP) via the hydrogenation of each double bond of the isoprenoid chains - - - 0.0000000000000000000000000000000000001202 144.0
DYD3_k127_6334722_0 O-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 451.0
DYD3_k127_6334722_1 Hemerythrin HHE cation binding domain - - - 0.000000000000000000000000000000000000000000000000000000000002623 213.0
DYD3_k127_6334722_2 Mut7-C RNAse domain K09122 - - 0.000000000000000000000000000001104 127.0
DYD3_k127_6334722_3 - - - - 0.0000647 52.0
DYD3_k127_6362120_0 Thiolase, N-terminal domain K00626 - 2.3.1.9 2.457e-216 674.0
DYD3_k127_6362120_1 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 585.0
DYD3_k127_6362120_2 Anaerobic ribonucleoside-triphosphate reductase K21636 - 1.1.98.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 410.0
DYD3_k127_6362120_3 Carbon-nitrogen hydrolase K11206 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001951 299.0
DYD3_k127_6362120_4 nucleic-acid-binding protein containing a Zn-ribbon K07068 - - 0.0000000000000000000000000000000000000001656 153.0
DYD3_k127_6362120_5 conserved protein implicated in secretion - - - 0.000000000000000000000000000006485 126.0
DYD3_k127_6391539_0 hydroxymethylglutaryl-CoA reductase (NADPH) activity K00021 - 1.1.1.34 1.617e-211 671.0
DYD3_k127_6391539_1 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 3.96e-208 657.0
DYD3_k127_6391539_2 Pterin binding enzyme K00796 - 2.5.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009185 283.0
DYD3_k127_6439469_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 1.577e-262 816.0
DYD3_k127_6439469_1 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 4.071e-253 787.0
DYD3_k127_6439469_2 TIGRFAM acetolactate synthase, large subunit, biosynthetic type K01652 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002525 472.0
DYD3_k127_6439469_3 Isocitrate isopropylmalate dehydrogenase K00052 - 1.1.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006501 434.0
DYD3_k127_6439469_4 acetolactate synthase, small K01653 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000001849 244.0
DYD3_k127_6439469_5 Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.0000000000000000000000000000000000000000000000000000000000125 208.0
DYD3_k127_6579571_0 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002637 516.0
DYD3_k127_6579571_1 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003864 327.0
DYD3_k127_6579571_2 Transcription elongation factor - - - 0.000000000000000000000000000000000001384 144.0
DYD3_k127_6579571_3 metal-dependent protease of the PAD1 JAB1 superfamily K21140 - 3.13.1.6 0.0000000000000004296 83.0
DYD3_k127_6580737_0 PFAM Multicopper oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001017 280.0
DYD3_k127_6580737_1 PFAM NHL repeat containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001377 279.0
DYD3_k127_6580737_3 PFAM periplasmic copper-binding - - - 0.000000000000000000000000005116 123.0
DYD3_k127_6580737_4 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.000000000000000000000005373 108.0
DYD3_k127_6580737_5 CHRD domain - - - 0.0000000000000000000004128 111.0
DYD3_k127_6580737_6 CHRD domain - - - 0.0000000000000000000005277 102.0
DYD3_k127_6580737_7 Polysaccharide deacetylase - - - 0.00000000000004363 84.0
DYD3_k127_6580737_8 Polysaccharide deacetylase - - - 0.000000000038 74.0
DYD3_k127_6624206_0 Ferritin-like domain K03594 - 1.16.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008223 360.0
DYD3_k127_6624206_1 COG2133 Glucose sorbosone dehydrogenases K21430 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008825 310.0
DYD3_k127_6624206_2 ABC1 family - - - 0.00000000000000000000000000000000000000000003759 164.0
DYD3_k127_6624206_3 - - - - 0.000000000000000000000000000005473 121.0
DYD3_k127_6628737_0 Cell division protein 48 (CDC48), domain 2 K13525 - - 0.0 1340.0
DYD3_k127_6628737_1 - - - - 0.00000000000000000000000000000000000001162 153.0
DYD3_k127_6673191_0 Succinyl-CoA ligase like flavodoxin domain K18593 - - 8.097e-317 983.0
DYD3_k127_6673191_1 DEAD DEAH box helicase K05592 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008437 537.0
DYD3_k127_6673191_10 Lrp/AsnC ligand binding domain - - - 0.000000000000000000000000002904 111.0
DYD3_k127_6673191_11 - - - - 0.000000000000000000000003113 111.0
DYD3_k127_6673191_13 PFAM transcriptional regulator PadR family protein - - - 0.00000000000000000136 90.0
DYD3_k127_6673191_2 Aminotransferase class-V K11717 - 2.8.1.7,4.4.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004526 450.0
DYD3_k127_6673191_3 PFAM D12 class N6 adenine-specific DNA methyltransferase K06223 - 2.1.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000004947 270.0
DYD3_k127_6673191_4 Zinc finger domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001172 254.0
DYD3_k127_6673191_5 Nitroreductase - - - 0.000000000000000000000000000000000000000000000000000000000006469 210.0
DYD3_k127_6673191_6 Appr-1'-p processing enzyme - - - 0.00000000000000000000000000000000000000000000003107 177.0
DYD3_k127_6673191_8 - - - - 0.00000000000000000000000000001871 118.0
DYD3_k127_6673191_9 Pfam:DUF385 - - - 0.00000000000000000000000000008382 118.0
DYD3_k127_668975_0 Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella K07324,K07325 GO:0005575,GO:0005623,GO:0009288,GO:0042995,GO:0043226,GO:0043228,GO:0044464 - 0.0000000000000000000000000000000000000000000000000001984 193.0
DYD3_k127_668975_1 - - - - 0.00000000000000000000000000000005177 140.0
DYD3_k127_668975_2 Archaeal flagellar protein G K07330 - - 0.00000000000000000000000000003941 122.0
DYD3_k127_668975_3 Archaeal flagellar protein F K07329 - - 0.0000000008926 70.0
DYD3_k127_6740203_0 - - - - 0.0000000000000000000000000000000000000000000000000005504 189.0
DYD3_k127_6740203_1 Universal stress protein - - - 0.000000000000000000000000000225 119.0
DYD3_k127_6740203_2 COG0589 Universal stress protein UspA and related nucleotide-binding proteins K20989 - - 0.000000000000000003943 90.0
DYD3_k127_6742396_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003748 260.0
DYD3_k127_6742396_1 - - - - 0.0000000000000000000000000000000000000741 147.0
DYD3_k127_6742396_2 - - - - 0.000000000000000000001341 97.0
DYD3_k127_6753389_0 PFAM Radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 593.0
DYD3_k127_6753389_1 ERCC4 domain K10896 - - 0.00000000000000000000000000000000000003175 157.0
DYD3_k127_6753389_2 low-complexity proteins - - - 0.000000000000000000000000000000000134 138.0
DYD3_k127_675722_0 FAD dependent oxidoreductase K15736 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003254 443.0
DYD3_k127_675722_1 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 319.0
DYD3_k127_675722_10 PFAM CHAD domain containing protein - - - 0.000003198 58.0
DYD3_k127_675722_2 COG2133 Glucose sorbosone dehydrogenases K21430 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002711 311.0
DYD3_k127_675722_3 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes K01515 - 3.6.1.13 0.00000000000000000000000000000000000000000000000000000155 197.0
DYD3_k127_675722_4 COG0433 Predicted ATPase K06915 - - 0.000000000000000000000000000000000000000000000005188 192.0
DYD3_k127_675722_6 Protein of unknown function (DUF790) K09744 - - 0.00000000000000000000000000000000001219 145.0
DYD3_k127_675722_7 TIGRFAM phosphohistidine phosphatase SixA K08296 - - 0.00000000000000000000000000000003097 131.0
DYD3_k127_675722_8 COG0433 Predicted ATPase - - - 0.000001773 51.0
DYD3_k127_675722_9 integrase family - - - 0.000002829 53.0
DYD3_k127_6763750_0 Belongs to the MCM family K10726 - - 1.392e-286 915.0
DYD3_k127_6763750_1 DNA-dependent ATPase and 3'-5' DNA helicase that may be involved in repair of stalled replication forks K03726 - - 2.878e-226 721.0
DYD3_k127_6763750_2 glycosyl transferase family K01001 - 2.7.8.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 395.0
DYD3_k127_6763750_3 Replication factor C K04801 - - 0.000000000000000000000000000000000000000000003086 168.0
DYD3_k127_6763750_4 Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3-diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2,3-di-O-phytanyl-sn-glyceryl phosphate) from 2,3-di-O-geranylgeranylglyceryl phosphate (DGGGP) via the hydrogenation of each double bond of the isoprenoid chains - - - 0.000000000000000000000000000000003267 130.0
DYD3_k127_6779946_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 2.108e-231 722.0
DYD3_k127_6779946_1 LAO AO transport system ATPase K07588 - - 0.000008741 49.0
DYD3_k127_6840645_0 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007713 346.0
DYD3_k127_6840645_1 - - - - 0.0000000000000000001858 91.0
DYD3_k127_6867881_0 adenylosuccinate lyase K01756 - 4.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 572.0
DYD3_k127_6867881_1 Multicopper oxidase K00368 - 1.7.2.1 0.00000000000000000000000000000000000000000000000007058 182.0
DYD3_k127_6875367_0 Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2 K03243 - - 4.135e-207 651.0
DYD3_k127_6875367_1 Thioredoxin K03671 - - 0.00000000000000000000000000000000000000000000000000000004 197.0
DYD3_k127_6875367_2 Archease protein family (MTH1598/TM1083) - - - 0.0000000000000000000000001097 109.0
DYD3_k127_693428_1 - - - - 0.00000000000001482 85.0
DYD3_k127_693428_2 RNA binding K07581 - - 0.00000000000002892 77.0
DYD3_k127_6943537_1 Nitroreductase family - - - 0.0000000000000000000000000000000000001782 147.0
DYD3_k127_6943537_2 - - - - 0.00002609 49.0
DYD3_k127_6944542_0 pfkB family carbohydrate kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008572 345.0
DYD3_k127_6944542_1 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.000000000000000000000000000000000000000000000000000000000000000001728 231.0
DYD3_k127_6944542_2 KH domain protein K06961 - - 0.00001336 48.0
DYD3_k127_6958448_0 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001138 528.0
DYD3_k127_6958448_1 Domain present in PSD-95, Dlg, and ZO-1/2. K08372 - - 0.00006551 49.0
DYD3_k127_6958742_0 Part of the Rad50 Mre11 complex, which is involved in the early steps of DNA double-strand break (DSB) repair. The complex may facilitate opening of the processed DNA ends to aid in the recruitment of HerA and NurA. Rad50 controls the balance between DNA end bridging and DNA resection via ATP-dependent structural rearrangements of the Rad50 Mre11 complex K03546 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 347.0
DYD3_k127_6958742_1 PPIC-type PPIASE domain K07533 - 5.2.1.8 0.000000000000000000000000000000000000000172 152.0
DYD3_k127_6958742_2 Belongs to the ompA family K20276 - - 0.000000000000000003374 93.0
DYD3_k127_6972900_0 - - - - 0.000000000000000000000000000000000000005589 149.0
DYD3_k127_6972900_1 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source K01916 - 6.3.1.5 0.000000000000000000000000000000001504 135.0
DYD3_k127_6972900_2 MtN3 and saliva related transmembrane protein K15383 - - 0.0000000005971 63.0
DYD3_k127_6981104_0 MGS-like domain K01955 - 6.3.5.5 3.232e-253 789.0
DYD3_k127_6981104_1 Calcineurin-like phosphoesterase K06953 - - 0.0000000000000000000000000000000000000000000000000000000000000000173 232.0
DYD3_k127_6981104_3 THUMP domain K06963 - - 0.0000000000000000000000000000000000000000003264 165.0
DYD3_k127_6981104_4 Kinase binding protein CGI-121 - - - 0.0000000000001124 77.0
DYD3_k127_6990371_0 geranylgeranyl reductase K17830 - 1.3.1.101,1.3.7.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 426.0
DYD3_k127_6990371_1 AhpC/TSA antioxidant enzyme K03564 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000001898 201.0
DYD3_k127_701364_0 Large family of predicted nucleotide-binding domains K06865 - - 1.629e-245 771.0
DYD3_k127_701364_1 Enoyl-(Acyl carrier protein) reductase - - - 2.267e-215 684.0
DYD3_k127_701364_10 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000000005145 160.0
DYD3_k127_701364_12 - - - - 0.00000001724 59.0
DYD3_k127_701364_2 DinB superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 471.0
DYD3_k127_701364_3 homoserine dehydrogenase K00003 - 1.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001937 444.0
DYD3_k127_701364_4 COG2133 Glucose sorbosone dehydrogenases K21430 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004977 362.0
DYD3_k127_701364_5 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001743 302.0
DYD3_k127_701364_6 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 294.0
DYD3_k127_701364_7 Protein of unknown function DUF47 K07220 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008368 280.0
DYD3_k127_701364_8 tRNA intron endonuclease, N-terminal domain K01170 - 4.6.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000002039 249.0
DYD3_k127_701364_9 Histidine-specific methyltransferase, SAM-dependent - - - 0.000000000000000000000000000000000000000000002394 171.0
DYD3_k127_7044510_0 Galactose-1-phosphate uridyl transferase, N-terminal domain K00965 - 2.7.7.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003833 490.0
DYD3_k127_7044510_2 - - - - 0.00000000000005015 76.0
DYD3_k127_7044510_3 - - - - 0.000000000002052 70.0
DYD3_k127_7063841_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004639 276.0
DYD3_k127_7063841_1 - - - - 0.000000000000000000000000000000000000000000000000000000000003832 216.0
DYD3_k127_7063841_2 Orotidine 5'-phosphate decarboxylase / HUMPS family K01591 - 4.1.1.23 0.00000000000000000000000000000000000000000000000000000000002939 213.0
DYD3_k127_7063841_3 NUDIX domain - - - 0.0000000000000000000000000000000000296 137.0
DYD3_k127_7091325_0 Catalyzes the oxidative deamination and cyclization of 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonic acid (ADH) to yield 3- dehydroquinate (DHQ), which is fed into the canonical shikimic pathway of aromatic amino acid biosynthesis K11646 - 1.4.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002236 442.0
DYD3_k127_7091325_1 Catalyzes a transaldol reaction between 6-deoxy-5- ketofructose 1-phosphate (DKFP) and L-aspartate semialdehyde (ASA) with an elimination of hydroxypyruvaldehyde phosphate to yield 2- amino-3,7-dideoxy-D-threo-hept-6-ulosonate (ADH). Plays a key role in an alternative pathway of the biosynthesis of 3-dehydroquinate (DHQ), which is involved in the canonical pathway for the biosynthesis of aromatic amino acids K16306 - 2.2.1.10,4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008518 398.0
DYD3_k127_7091325_2 Belongs to the P(II) protein family K04751 - - 0.0000000000000000000000000000000000002151 143.0
DYD3_k127_7092201_0 MFS_1 like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002678 384.0
DYD3_k127_7092201_1 CDGSH-type zinc finger. Function unknown. - - - 0.00000000000001158 77.0
DYD3_k127_7092201_2 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.00000105 51.0
DYD3_k127_7092201_3 Sigma-54 interaction domain K07714 - - 0.0004679 46.0
DYD3_k127_7113062_0 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004117 547.0
DYD3_k127_7125815_0 ABC 3 transport family K09816 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002102 294.0
DYD3_k127_7125815_1 PFAM ABC transporter K09817 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009518 288.0
DYD3_k127_7125815_2 Alginate lyase - - - 0.000000000000000000002117 100.0
DYD3_k127_7129114_0 Sodium hydrogen exchanger K03455 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005657 467.0
DYD3_k127_7129114_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009456 250.0
DYD3_k127_7129114_3 protein (ATP-grasp superfamily) K07159 - - 0.0000000000000000000000000000000000000000000000000000000000009078 217.0
DYD3_k127_7132551_0 PFAM Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004189 391.0
DYD3_k127_7132551_1 thymidylate kinase K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000001751 260.0
DYD3_k127_7137933_0 YcaO cyclodehydratase, ATP-ad Mg2+-binding - - - 0.00000000000000000000000000000000000000000000006855 193.0
DYD3_k127_7137933_1 Nitroreductase family - - - 0.0000000000000000000000000000000000000002778 163.0
DYD3_k127_7137933_2 exo-alpha-(2->6)-sialidase activity - - - 0.0000000008817 66.0
DYD3_k127_7154597_0 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.000000000000000000000000000000000000000000000000000000000000000001261 231.0
DYD3_k127_7154597_1 pfkB family carbohydrate kinase - - - 0.00000000000000000000000000000000000000000000000001618 183.0
DYD3_k127_7154597_2 K homology RNA-binding domain K06961 - - 0.000000000000000000000000000000000000000000000001852 179.0
DYD3_k127_7154597_3 Protein of unknown function (DUF424) K09148 - - 0.000000000000000008983 88.0
DYD3_k127_7202299_1 CHASE2 K01768 - 4.6.1.1 0.00000000000000000000000004338 117.0
DYD3_k127_7202299_2 Mechanosensitive ion channel - - - 0.0000000000000000000000002959 117.0
DYD3_k127_7202299_3 Predicted membrane protein (DUF2254) - - - 0.0000000000000000001733 103.0
DYD3_k127_7202299_4 integrase family - - - 0.0000000000000002823 86.0
DYD3_k127_7202299_5 phosphorelay sensor kinase activity - - - 0.0000000002936 66.0
DYD3_k127_7202299_6 Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules K04763 - - 0.00004129 48.0
DYD3_k127_7202299_9 integrase family - - - 0.0007843 43.0
DYD3_k127_72063_0 flavodoxin nitric oxide synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002646 296.0
DYD3_k127_72063_1 - - - - 0.00000004942 60.0
DYD3_k127_72063_2 Alcohol dehydrogenase GroES domain protein K12957 - - 0.00007463 45.0
DYD3_k127_721377_0 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001506 448.0
DYD3_k127_721377_1 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008264 306.0
DYD3_k127_721377_2 Histidine-specific methyltransferase, SAM-dependent - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 291.0
DYD3_k127_721377_3 Xylose isomerase-like TIM barrel - - - 0.000000000000000000000000000004004 130.0
DYD3_k127_721377_4 with the TIM-barrel fold K07051 - - 0.0000000000000000000000000001546 116.0
DYD3_k127_721377_5 UbiA prenyltransferase family K03179 - 2.5.1.39 0.00000000000000000002961 101.0
DYD3_k127_7220105_0 exonuclease of the beta-lactamase fold involved in RNA processing K07577 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004504 595.0
DYD3_k127_7220105_1 Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates K18532 - 2.7.4.3 0.00000000000000000000000000002989 121.0
DYD3_k127_7220105_3 8-oxoguanine DNA glycosylase K03660 - 4.2.99.18 0.000000000002462 69.0
DYD3_k127_7220105_4 Belongs to the glycosyl hydrolase 5 (cellulase A) family K05991 - 3.2.1.123 0.00001097 57.0
DYD3_k127_7228545_0 Rhomboid family - - - 0.00000000000000000000000000000000000000000000000000000000000000000001289 240.0
DYD3_k127_7228545_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000001374 235.0
DYD3_k127_7228545_2 Nitroreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000003444 235.0
DYD3_k127_7228545_3 Appr-1'-p processing enzyme - - - 0.0000000000000000000000000000000000000000000000000003689 190.0
DYD3_k127_727667_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 2.001e-250 774.0
DYD3_k127_727667_1 3-isopropylmalate dehydratase, large subunit K01703 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007488 464.0
DYD3_k127_727667_2 3-isopropylmalate dehydratase, small subunit K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 305.0
DYD3_k127_727667_3 3-isopropylmalate dehydratase, large subunit K01703 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003267 265.0
DYD3_k127_729873_0 Methionine synthase K00548 - 2.1.1.13 0.0 1110.0
DYD3_k127_729873_1 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.0000000000000000000000000000000000000001059 155.0
DYD3_k127_732520_0 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007374 395.0
DYD3_k127_732520_1 Belongs to the peptidase M24B family K01262,K01271 - 3.4.11.9,3.4.13.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001771 361.0
DYD3_k127_732520_2 Phosphate uptake regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 308.0
DYD3_k127_732520_3 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006338 304.0
DYD3_k127_732520_4 Pantothenate synthetase K09722 - 6.3.2.36 0.000000000000000000000000000000000000000000000000000000000000000000000008214 250.0
DYD3_k127_732520_5 kinase, sugar kinase superfamily K06982 - 2.7.1.169 0.0000000000000000000000000000000000000000000000000000000000000000008985 239.0
DYD3_k127_732520_6 - - - - 0.0000000000001305 71.0
DYD3_k127_734325_0 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002255 474.0
DYD3_k127_734325_1 PFAM Permease for cytosine purines, uracil, thiamine, allantoin K03457 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000641 369.0
DYD3_k127_734325_2 Oxidoreductase family, NAD-binding Rossmann fold K18855 - 1.1.1.374 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001734 366.0
DYD3_k127_734325_3 Hexapeptide repeat of succinyl-transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001469 244.0
DYD3_k127_734325_4 Trm112p-like protein - - - 0.000000000000000000000000000000000004379 139.0
DYD3_k127_734325_5 Nicotinamide-nucleotide adenylyltransferase - - - 0.000000000000000000000007394 106.0
DYD3_k127_739762_0 COG1335 Amidases related to nicotinamidase K09020 - 3.5.1.110 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 287.0
DYD3_k127_739762_1 oxidoreductase activity, acting on CH-OH group of donors - - - 0.0000000000000000000000000000000000000000000015 175.0
DYD3_k127_739762_2 - - - - 0.0000000002738 68.0
DYD3_k127_743439_1 pilus organization K02674,K07004 - - 0.000000000000000000000000006427 129.0
DYD3_k127_74895_0 Queuosine biosynthesis protein QueC K06920 - 6.3.4.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000466 270.0
DYD3_k127_74895_1 - - - - 0.0000000000000000000000000000000000000000000000000003002 190.0
DYD3_k127_74895_2 zinc-ribbon domain - - - 0.000000000000000000000000000000000001973 141.0
DYD3_k127_759983_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 538.0
DYD3_k127_759983_1 Methyltransferase type 11 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001217 261.0
DYD3_k127_759983_2 - - - - 0.00000000000000000000000000000000004771 143.0
DYD3_k127_759983_3 - - - - 0.00000000000000000000003572 104.0
DYD3_k127_759983_4 PFAM CBS domain - - - 0.000000000000004282 81.0
DYD3_k127_787049_0 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004385 302.0
DYD3_k127_787049_1 ester cyclase - - - 0.00000000000000000000000000000000000000000000000000005511 191.0
DYD3_k127_787049_2 Transcriptional regulator - - - 0.00000007591 57.0
DYD3_k127_806700_0 - - - - 0.000002021 60.0
DYD3_k127_806700_1 Protein of unknown function (DUF4043) - - - 0.000004836 58.0
DYD3_k127_817928_0 - - - - 3.223e-294 927.0
DYD3_k127_817928_1 Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 351.0
DYD3_k127_817928_2 protein secretion by the type IV secretion system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001284 261.0
DYD3_k127_817928_3 - - - - 0.00000000000000000000000000000000000000000005135 163.0
DYD3_k127_829382_0 Ammonium Transporter K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001658 301.0
DYD3_k127_829382_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000005747 232.0
DYD3_k127_829382_2 Protein of unknown function (DUF1428) - - - 0.000000000000000000000000000000000000000000001277 168.0
DYD3_k127_829382_3 Lysine exporter protein LysE YggA - - - 0.0000000000000000000000000000000000000002463 157.0
DYD3_k127_829382_4 Purple acid Phosphatase, N-terminal domain - - - 0.00000000000000000007419 104.0
DYD3_k127_829382_5 - - - - 0.0000000000000009852 78.0
DYD3_k127_833305_0 NAD(P)H-binding K15894 - 4.2.1.115 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000742 408.0
DYD3_k127_833305_1 Cytidylyltransferase K07257 - - 0.000000000000000000000000000000000000000000000000000000000001152 214.0
DYD3_k127_833305_2 - - - - 0.000000000000000000003122 96.0
DYD3_k127_847250_0 PFAM Cupin 2, conserved barrel domain protein K11312 - - 0.0000000000000000000000000000000000000000000008379 168.0
DYD3_k127_847250_1 Bacterial protein of unknown function (DUF899) - - - 0.00000000000000000000000000000000000000004069 154.0
DYD3_k127_847250_2 of nitrite reductase and ring-hydroxylating K05710 - - 0.00000000000000000000006478 101.0
DYD3_k127_847250_4 Bacterial protein of unknown function (DUF899) - - - 0.0000000000000001869 81.0
DYD3_k127_847250_5 Bacterial protein of unknown function (DUF899) - - - 0.00000000000001078 73.0
DYD3_k127_847250_6 glucosylceramidase activity - - - 0.0000000000009104 69.0
DYD3_k127_847250_7 Bacterial protein of unknown function (DUF899) - - - 0.000000000804 61.0
DYD3_k127_847250_8 glucosylceramidase activity - - - 0.00002177 48.0
DYD3_k127_847250_9 Bacterial protein of unknown function (DUF899) - - - 0.0000585 47.0
DYD3_k127_8509_0 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is a component of the KEOPS complex that is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. The Kae1 domain likely plays a direct catalytic role in this reaction. The Bud32 domain probably displays kinase activity that regulates Kae1 function - - - 0.00000000000000000000000000000000000000000000000000000001871 204.0
DYD3_k127_8509_1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000007472 175.0
DYD3_k127_853516_0 ABC-type nitrate sulfonate bicarbonate transport system, permease component K02050 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008377 259.0
DYD3_k127_853516_1 DoxX K15977 - - 0.0000000000000000000004796 101.0
DYD3_k127_863499_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000003183 226.0
DYD3_k127_863499_1 Transcriptional regulator - - - 0.00000000000000000187 87.0
DYD3_k127_866068_0 Archaeal Nre, N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005039 437.0
DYD3_k127_866068_1 ATP-dependent agmatine transferase that catalyzes the formation of 2-agmatinylcytidine (agm2C) at the wobble position (C34) of tRNA(Ile2), converting the codon specificity from AUG to AUA K06932 - 6.3.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002672 378.0
DYD3_k127_866068_2 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005989 372.0
DYD3_k127_866068_3 - - - - 0.000000000000000000000000000000000000006917 156.0
DYD3_k127_866068_4 Hemolysin-type calcium-binding region - - - 0.0000000000000000009033 94.0
DYD3_k127_866068_5 Cell division inhibitor - - - 0.0000000000000001327 85.0
DYD3_k127_874915_0 Radical SAM K18285 - 2.5.1.120 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 544.0
DYD3_k127_874915_1 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007749 512.0
DYD3_k127_874915_2 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.00000000000000000000000000000001001 130.0
DYD3_k127_909041_1 Domain of unknown function (DUF4328) - - - 0.00002511 55.0
DYD3_k127_909041_2 response regulator, receiver - - - 0.00008782 48.0
DYD3_k127_9137_0 carbamoyl-phosphate synthase, small subunit K01956 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 533.0
DYD3_k127_9137_1 MGS-like domain K01955 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000001873 221.0
DYD3_k127_9137_2 Belongs to the GARS family K01945 - 6.3.4.13 0.00000000000000000000000000000000000000000009652 163.0
DYD3_k127_9137_3 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03014 - - 0.000000000000000000000000000001402 126.0
DYD3_k127_9137_4 Cyclophilin-like K09143 - - 0.0000000000000000000000000002769 119.0
DYD3_k127_9137_5 - - - - 0.000000000000000008308 87.0
DYD3_k127_9137_6 MGS-like domain K01955 - 6.3.5.5 0.0001199 44.0
DYD3_k127_938437_0 UDP-N-acetylglucosamine 2-epimerase K01791 - 5.1.3.14 3.053e-225 709.0
DYD3_k127_938437_1 Nucleotidyl transferase K00966 - 2.7.7.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002356 354.0
DYD3_k127_938437_2 nucleotidyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003112 349.0
DYD3_k127_938437_3 Phosphomethylpyrimidine kinase K21219 - 2.5.1.3,2.7.1.49,2.7.4.7 0.00000000000000000000000000000000000000000000000003875 183.0
DYD3_k127_942541_0 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003082 251.0
DYD3_k127_942541_1 Lactonase, 7-bladed beta-propeller - - - 0.000000000000000000000000000000000000000000000008181 188.0
DYD3_k127_942541_3 - - - - 0.0000002079 59.0
DYD3_k127_943215_0 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 374.0
DYD3_k127_943215_1 Catalyzes the formation of 2-amino-5-formylamino-6- ribofuranosylamino-4(3H)-pyrimidinone ribonucleotide monophosphate and inorganic phosphate from GTP. Also has an independent pyrophosphate phosphohydrolase activity K08096 - 3.5.4.29 0.0000000000000000000000000000000000000000000000000000000000000000000000001318 256.0
DYD3_k127_943215_2 PFAM bifunctional deaminase-reductase domain protein K14654 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006139,GO:0006725,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009451,GO:0009987,GO:0016070,GO:0016491,GO:0016614,GO:0016616,GO:0017144,GO:0018130,GO:0034641,GO:0036094,GO:0042364,GO:0042726,GO:0042727,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0046983,GO:0048037,GO:0050661,GO:0050662,GO:0051287,GO:0055114,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.1.1.302 0.00000000000000000000000000000000009536 136.0
DYD3_k127_943215_3 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.000000000000000000000000009148 111.0
DYD3_k127_951547_0 Zn-dependent protease with chaperone function K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 379.0
DYD3_k127_951547_1 including yeast histone deacetylase and acetoin utilization protein K04768 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004161 364.0
DYD3_k127_951547_2 - - - - 0.00000000000000000000000000000000000000000000002472 175.0
DYD3_k127_957502_0 UbiD family decarboxylase K03182 - 4.1.1.98 1.795e-194 612.0
DYD3_k127_957502_1 SAICAR synthetase K01923 - 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005872 309.0
DYD3_k127_957502_2 protein conserved in archaea K09738 - - 0.00005403 47.0
DYD3_k127_970717_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00833 - 2.6.1.62 0.00000000000000000000000000000000000000000000000000000000000000000004943 235.0
DYD3_k127_970717_1 - - - - 0.000000000000000000000000000000000000000000000001061 176.0
DYD3_k127_970717_2 Thiolase, N-terminal domain K00626 - 2.3.1.9 0.0000000000000000000000000004447 114.0
DYD3_k127_970717_3 - - - - 0.0000000000000000000309 94.0
DYD3_k127_970717_4 nucleic-acid-binding protein containing a Zn-ribbon K07068 - - 0.0000000000000003263 85.0
DYD3_k127_979974_0 Belongs to the LDH MDH superfamily K00024 - 1.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004151 450.0
DYD3_k127_979974_1 Belongs to the universal ribosomal protein uS5 family K02988 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001773 331.0
DYD3_k127_979974_2 AIR carboxylase K06898 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001345 253.0
DYD3_k127_979974_3 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.0000000000000000000000000000000000000000000000000000000000002057 218.0
DYD3_k127_979974_4 ribosomal protein K02907 - - 0.0000000000000000000000000000000000000000000008015 170.0
DYD3_k127_979974_5 Binds to the 23S rRNA K02876 - - 0.0000000000000000000000000000000001123 134.0
DYD3_k127_980573_0 Amino acid permease - - - 9.905e-305 953.0
DYD3_k127_980573_1 High-affinity Fe2 Pb2 permease K07243 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 473.0
DYD3_k127_980573_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009957 278.0
DYD3_k127_980573_3 phosphorelay sensor kinase activity - - - 0.000000000000001024 82.0
DYD3_k127_980573_4 Protein of unknown function (DUF1059) - - - 0.00002975 49.0
DYD3_k127_981469_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit K02117 - 3.6.3.14,3.6.3.15 0.0 1019.0
DYD3_k127_981469_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit K02118 - - 1.1e-264 818.0
DYD3_k127_981469_10 - - - - 0.00000004095 58.0
DYD3_k127_981469_11 - - - - 0.00000223 53.0
DYD3_k127_981469_2 Belongs to the V-ATPase 116 kDa subunit family K02123 - - 2.004e-252 796.0
DYD3_k127_981469_3 ATP synthase (C/AC39) subunit K02119 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009338 460.0
DYD3_k127_981469_4 Produces ATP from ADP in the presence of a proton gradient across the membrane K02120 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002138 333.0
DYD3_k127_981469_5 Involved in allosteric regulation of aspartate carbamoyltransferase K00610 - - 0.0000000000000000000000000000000000000000000000000000000000000000000006729 239.0
DYD3_k127_981469_6 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000004357 216.0
DYD3_k127_981469_7 Produces ATP from ADP in the presence of a proton gradient across the membrane K02121 - - 0.000000000000000000000000000000000000000000000000000000004085 205.0
DYD3_k127_981469_8 ATP synthase subunit C K02124 - - 0.000000000000000000000004797 105.0
DYD3_k127_981469_9 - - - - 0.00000000000005859 76.0
DYD3_k127_986519_0 DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 4.416e-209 664.0
DYD3_k127_986519_1 factor TFIIB K03124 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005708 264.0
DYD3_k127_988844_0 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate K02233 - 2.7.8.26 0.000000000000000000000000000000000000000000000000000000004645 207.0
DYD3_k127_988844_1 thioesterase - - - 0.000000000000000000000000000000000000000000000001688 177.0
DYD3_k127_988844_2 Binds to the 23S rRNA K02929 - - 0.00000000000000000000000000000000000000000001375 163.0
DYD3_k127_988844_3 ribosomal protein K02978 - - 0.000000000000000008648 84.0
DYD3_k127_988844_4 PFAM Rieske 2Fe-2S domain K00411 - 1.10.2.2 0.00000000000000004153 81.0
DYD3_k127_988844_5 COG2266 GTP adenosylcobinamide-phosphate guanylyltransferase K19712 - 2.7.7.62 0.000000001356 67.0
DYD3_k127_993481_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005427 467.0
DYD3_k127_993481_1 Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001051 276.0