logo

Overview

ID MAG00950
Name DYD3_bin.2
Sample SMP0027
Taxonomy
Kingdom Archaea
Phylum Thermoplasmatota
Class E2
Order JACPAO01
Family JACPAO01
Genus
Species
Assembly information
Completeness (%) 70.93
Contamination (%) 2.5
GC content (%) 63.0
N50 (bp) 6,682
Genome size (bp) 2,559,531

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2015

Gene name Description KEGG GOs EC E-value Score Sequence
DYD3_k127_101204_0 Belongs to the eukaryotic ribosomal protein eS31 family K02977 - - 0.00000000000000005504 82.0
DYD3_k127_101204_1 Belongs to the eukaryotic ribosomal protein eS24 family K02974 - - 0.0000000000000351 79.0
DYD3_k127_1035290_0 transcriptional - - - 0.0000000000000000000001855 101.0
DYD3_k127_1035290_1 - - - - 0.00001142 51.0
DYD3_k127_1035290_2 PFAM blue (type 1) copper domain protein K00368 - 1.7.2.1 0.00005935 52.0
DYD3_k127_1035290_3 Thioredoxin-like - - - 0.0001516 48.0
DYD3_k127_1038085_0 Belongs to the MIP aquaporin (TC 1.A.8) family K02440,K06188,K09874 - - 0.00000000000000000000000000000000000000000000000000000000002063 214.0
DYD3_k127_1038085_1 UbiA prenyltransferase family K04040 - 2.5.1.133,2.5.1.62 0.0000000000000000000000000000000000000004074 162.0
DYD3_k127_1038085_2 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823,K07250 - 2.6.1.19,2.6.1.22 0.0000000000000005769 79.0
DYD3_k127_1038085_3 PFAM blue (type 1) copper domain protein - - - 0.00000000081 71.0
DYD3_k127_1038085_4 FR47-like protein K03789 - 2.3.1.128 0.000002829 55.0
DYD3_k127_1038085_5 TIGRFAM TonB-dependent siderophore receptor K02014 - - 0.000005803 58.0
DYD3_k127_1038085_6 PFAM blue (type 1) copper domain protein K00368 - 1.7.2.1 0.000006536 58.0
DYD3_k127_1038085_7 PFAM TonB-dependent Receptor Plug Domain K02014 - - 0.00003479 55.0
DYD3_k127_1094435_0 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis K13010 - 2.6.1.102 0.00000000000000000000000000000000000000000003547 167.0
DYD3_k127_1094435_1 Glycosyl transferase 4-like - - - 0.0000000000000000447 94.0
DYD3_k127_1094435_2 Sodium/hydrogen exchanger family - - - 0.0000000000004792 79.0
DYD3_k127_1111917_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1143.0
DYD3_k127_1111917_1 A G-specific adenine glycosylase K03575 - - 0.000000000000000000000000000000000000000000000000000000000000002877 231.0
DYD3_k127_1114585_0 transport - - - 0.0002283 53.0
DYD3_k127_1114585_1 TonB dependent receptor K16087 - - 0.0008767 48.0
DYD3_k127_1127523_0 COG1290 Cytochrome b subunit of the bc complex - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001616 289.0
DYD3_k127_1127523_1 COG1290 Cytochrome b subunit of the bc complex - - - 0.000000000000000000000000000000000000002051 159.0
DYD3_k127_1127523_2 COG0723 Rieske Fe-S protein - - - 0.00000000000000000003234 100.0
DYD3_k127_1127523_3 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.0000000000003732 79.0
DYD3_k127_1127523_4 NUDIX domain - - - 0.000000004739 63.0
DYD3_k127_1127523_5 Glutaredoxin-like domain (DUF836) - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00007346 55.0
DYD3_k127_1130441_0 Aminotransferase class-V K11717 - 2.8.1.7,4.4.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 324.0
DYD3_k127_1130441_1 PFAM Glycosyl transferase family 2 K19003 - 2.4.1.336 0.000000000000000000000000000000000000000000000001394 195.0
DYD3_k127_1130441_2 - K21029 - 2.7.7.80 0.0002841 48.0
DYD3_k127_1136255_0 metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain K07050 - - 0.0000000000000000000000000000000000000000000000000000000000002562 220.0
DYD3_k127_1136255_1 Thiamin pyrophosphokinase, vitamin B1 binding domain K00949 - 2.7.6.2 0.0000000000000000000004869 104.0
DYD3_k127_1136255_2 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.0000000005043 68.0
DYD3_k127_1136255_3 Addiction module antidote - - - 0.000194 46.0
DYD3_k127_116939_0 Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) K01823 - 5.3.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003306 310.0
DYD3_k127_1175166_0 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.000000000000000000000000000000000000000002675 176.0
DYD3_k127_1175166_1 - - - - 0.00000000001381 77.0
DYD3_k127_1182489_0 Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules K04483 GO:0000150,GO:0000217,GO:0000400,GO:0000724,GO:0000725,GO:0000730,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003697,GO:0003824,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006312,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009314,GO:0009628,GO:0009987,GO:0010212,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022607,GO:0033554,GO:0034622,GO:0034641,GO:0042148,GO:0042623,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0045003,GO:0046483,GO:0050896,GO:0051716,GO:0065003,GO:0065004,GO:0071704,GO:0071824,GO:0071840,GO:0090304,GO:0090735,GO:0097159,GO:0140097,GO:1901360,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009676 286.0
DYD3_k127_1182489_1 Integral membrane protein DUF92 - - - 0.0000000000000000000000000000004584 131.0
DYD3_k127_1182489_2 Dodecin K09165 - - 0.000000000000001388 79.0
DYD3_k127_1182489_3 protein conserved in archaea - - - 0.00000003143 65.0
DYD3_k127_1182630_0 Required for chromosome condensation and partitioning K03529 - - 2.755e-206 685.0
DYD3_k127_1182630_1 chromosome segregation and condensation protein ScpA K05896 - - 0.000000000000000000000000000000000000000000000669 178.0
DYD3_k127_1182630_2 TIGRFAM segregation and condensation protein B K06024 - - 0.0000000000000000000000000000000005396 139.0
DYD3_k127_1190438_0 inositol-3-phosphate synthase activity K01858 GO:0003674,GO:0003824,GO:0004512,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009405,GO:0009987,GO:0010125,GO:0010126,GO:0016137,GO:0016138,GO:0016853,GO:0016872,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044272,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0051704,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1901657,GO:1901659 5.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009795 493.0
DYD3_k127_1190438_1 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 341.0
DYD3_k127_1190438_2 SAICAR synthetase K01923 - 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000004796 219.0
DYD3_k127_1230134_0 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001296 289.0
DYD3_k127_1230134_1 Sodium/hydrogen exchanger family - - - 0.00000000000000000000000000000000000000000000000000000000000000837 231.0
DYD3_k127_1230134_10 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K10943 - - 0.0000000008883 68.0
DYD3_k127_1230134_11 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K10126 - - 0.000000003003 67.0
DYD3_k127_1230134_12 Domain of unknown function (DUF4332) - - - 0.0000006129 61.0
DYD3_k127_1230134_13 CsbD-like - - - 0.00003375 50.0
DYD3_k127_1230134_14 RelA SpoT domain protein - - - 0.0001009 55.0
DYD3_k127_1230134_15 protein conserved in archaea - - - 0.000537 52.0
DYD3_k127_1230134_16 - - - - 0.0005763 52.0
DYD3_k127_1230134_2 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000002067 214.0
DYD3_k127_1230134_3 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism - - - 0.0000000000000000000000000000000000000003662 154.0
DYD3_k127_1230134_4 Glycosyltransferase Family 4 K00743 - 2.4.1.87 0.0000000000000000000000000000000003801 145.0
DYD3_k127_1230134_5 NAD(P)H-binding - - - 0.0000000000000000000000000000002664 132.0
DYD3_k127_1230134_6 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.00000000000000000000004069 115.0
DYD3_k127_1230134_7 phosphorelay signal transduction system - - - 0.000000000000000004034 91.0
DYD3_k127_1230134_8 Glycosyl transferase family 21 - - - 0.00000000000000366 87.0
DYD3_k127_1230134_9 translation initiation factor activity K06996 - - 0.0000000000008189 74.0
DYD3_k127_1249154_0 Diphthamide K07561 - 2.5.1.108 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 301.0
DYD3_k127_1249154_1 Catalyzes a salvage reaction resulting in the formation of IMP that is energically less costly than de novo synthesis K00759 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.4.2.7 0.000000000000000000000000000000001503 134.0
DYD3_k127_1249154_2 Carboxypeptidase regulatory-like domain K07151 - 2.4.99.18 0.0000000000000000000000001849 122.0
DYD3_k127_1268931_0 Belongs to the glycosyl hydrolase 57 family K07405 - 3.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001399 458.0
DYD3_k127_1268931_1 COG3387 Glucoamylase and related glycosyl hydrolases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 384.0
DYD3_k127_1268931_2 Starch synthase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008479 278.0
DYD3_k127_1268931_3 PFAM sigma-54 factor interaction domain-containing protein, Propionate catabolism activator domain-containing protein - - - 0.0000005244 56.0
DYD3_k127_1272964_0 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.00000000000000000000000000000001927 144.0
DYD3_k127_1294420_0 exo-alpha-(2->6)-sialidase activity - - - 0.00000000000000000000000009839 122.0
DYD3_k127_131228_0 Enoyl-CoA hydratase/isomerase K01661 - 4.1.3.36 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009252 444.0
DYD3_k127_131228_1 Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) K02551 - 2.2.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009295 457.0
DYD3_k127_131228_2 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006461 304.0
DYD3_k127_131228_3 Belongs to the MenA family. Type 1 subfamily K02548 - 2.5.1.74 0.00000000000000000000000000000000000000000000000000000000000000000000000008425 270.0
DYD3_k127_131228_4 Isochorismate synthase K02552 - 5.4.4.2 0.000000000000000000000000000000000000000000000000000000000000000003629 243.0
DYD3_k127_131228_5 Catalyzes a proton abstraction reaction that results in 2,5-elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6- hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC) K08680 - 4.2.99.20 0.00000000000000000000000000000000000000000000002065 181.0
DYD3_k127_131228_6 Enoyl-CoA hydratase/isomerase K15866 - 5.3.3.18 0.000000000000000000000000000000000000000004502 164.0
DYD3_k127_13462_0 FAD linked oxidases, C-terminal domain K00803 - 2.5.1.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002156 344.0
DYD3_k127_13462_1 Belongs to the HesB IscA family K13628 - - 0.00000000000000000000000636 108.0
DYD3_k127_13462_2 Carboxypeptidase regulatory-like domain - - - 0.0005655 50.0
DYD3_k127_1352526_0 FIST C domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001864 447.0
DYD3_k127_1352526_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000001279 149.0
DYD3_k127_1352526_2 Catalyzes the formation of CDP-2,3-bis-(O- geranylgeranyl)-sn-glycerol (CDP-archaeol) from 2,3-bis-(O- geranylgeranyl)-sn-glycerol 1-phosphate (DGGGP) and CTP. This reaction is the third ether-bond-formation step in the biosynthesis of archaeal membrane lipids K19664 - 2.7.7.67 0.00000000000000000000001184 106.0
DYD3_k127_1358684_0 TIGRFAM chromate transporter, chromate ion transporter (CHR) family K07240 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001896 376.0
DYD3_k127_1358684_1 HupE / UreJ protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003908 306.0
DYD3_k127_1358684_2 Histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000004986 217.0
DYD3_k127_1358684_3 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 0.00000000000000000000000000000000004216 154.0
DYD3_k127_1358684_4 - - - - 0.0000000000000000000000558 111.0
DYD3_k127_1358684_5 HupE / UreJ protein - - - 0.00000000000000000000223 102.0
DYD3_k127_1358684_6 - - - - 0.0000000000000002247 91.0
DYD3_k127_1376959_0 Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety K00453 GO:0003674,GO:0003824,GO:0004833,GO:0005488,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016043,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019441,GO:0019752,GO:0020037,GO:0022607,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043436,GO:0043933,GO:0044085,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046906,GO:0048037,GO:0051213,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0070189,GO:0071704,GO:0071840,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.13.11.11 0.00000000000000000000000000000000000000000000000000000000000000009355 231.0
DYD3_k127_140830_0 Amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006206 256.0
DYD3_k127_1408692_0 ribosomal protein S15 K02956 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000002276 165.0
DYD3_k127_1408692_1 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.000000000000000000000000000000000000006139 151.0
DYD3_k127_1408692_2 DHHA1 domain K07463 - - 0.000000000000000001407 98.0
DYD3_k127_1408692_3 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035870,GO:0036220,GO:0036222,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.0000000000001643 72.0
DYD3_k127_1408692_4 - - - - 0.00002792 49.0
DYD3_k127_1435402_0 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.00000000000000000000000000000000000000000000000000000000000000007215 229.0
DYD3_k127_1435402_1 Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats - - - 0.0000001451 64.0
DYD3_k127_1435402_2 Tfp pilus assembly protein tip-associated adhesin K02674 - - 0.000001332 60.0
DYD3_k127_1435402_3 - - - - 0.0003617 44.0
DYD3_k127_1439021_0 PFAM tRNA methyltransferase complex GCD14 subunit K07442 - 2.1.1.219,2.1.1.220 0.000000000000000000000000000000000000000000000007557 182.0
DYD3_k127_1439021_1 Cytidylyltransferase-like K00952 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.7.1 0.000000000000000000000000000000000000004811 151.0
DYD3_k127_1439021_2 Membrane - - - 0.00000000000000000000000000000006543 134.0
DYD3_k127_1439021_3 nicotinamide-nucleotide amidase activity K03742,K03743 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363 3.5.1.42 0.00000000000000000000000000009203 124.0
DYD3_k127_1439021_4 Catalyzes the reversible interconversion of serine and glycine with a modified folate serving as the one-carbon carrier. Also exhibits a pteridine-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.000000000001163 69.0
DYD3_k127_1486500_0 Belongs to the class-I aminoacyl-tRNA synthetase family K04566 - 6.1.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003243 363.0
DYD3_k127_1486500_1 DEAD DEAH box helicase domain protein K03724 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000302 341.0
DYD3_k127_1486500_2 but it may be involved in stabilization of the trimeric complex - - - 0.00000000001512 67.0
DYD3_k127_1503359_0 Hemolysins and related proteins containing CBS domains - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007911 335.0
DYD3_k127_1539068_0 Part of the ABC transporter complex PstSACB involved in phosphate import K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000009359 233.0
DYD3_k127_1539068_1 Radical SAM - - - 0.000000000000000000000000000000000000000004438 169.0
DYD3_k127_1539068_2 Iron permease, FTR1 K07243 - - 0.000000000000000000000000000000000000000009591 173.0
DYD3_k127_1539068_3 Helix-turn-helix diphteria tox regulatory element K03709 - - 0.000000000000000000004992 100.0
DYD3_k127_1539068_4 E1-E2 ATPase K01533,K17686 - 3.6.3.4,3.6.3.54 0.0000000001883 72.0
DYD3_k127_1546722_0 COG0471 Di- and tricarboxylate transporters K03319,K09477,K11106,K14445 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002338 423.0
DYD3_k127_1546722_1 Transcription elongation factor Spt5 K02601 - - 0.000000000000000000000000000000000000000009905 161.0
DYD3_k127_1546722_2 Transcriptional regulator K10947 - - 0.0000000000000000000000000000009708 125.0
DYD3_k127_1546722_3 exo-alpha-(2->6)-sialidase activity - - - 0.0000000003039 72.0
DYD3_k127_1546722_4 PFAM CAAX amino terminal protease family K07052 - - 0.000000001112 67.0
DYD3_k127_1546722_5 RDD family - - - 0.000005357 58.0
DYD3_k127_1546722_6 domain protein K20276 - - 0.0008891 50.0
DYD3_k127_156089_0 PFAM LemA - - - 0.0000000000000000000000000000000000000000000002126 175.0
DYD3_k127_156089_1 gluconate 5-dehydrogenase K00046 - 1.1.1.69 0.0000000000000000000000000000000005348 142.0
DYD3_k127_156089_2 - - - - 0.0000000000000000000004301 106.0
DYD3_k127_156089_3 Peptidase M14, carboxypeptidase A - - - 0.000000000000000000001483 109.0
DYD3_k127_156089_4 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.00000000000000002931 86.0
DYD3_k127_156089_5 Malic enzyme, NAD binding domain K00029 - 1.1.1.40 0.0000000000512 65.0
DYD3_k127_1575527_0 - - - - 0.0000000000000000000001076 103.0
DYD3_k127_1575527_1 Contacts the emerging nascent chain on the ribosome K03626 - - 0.0000004544 54.0
DYD3_k127_1617668_0 Glyoxalase-like domain K07032 - - 0.000000000000000000000000000000000000000000005017 169.0
DYD3_k127_1617668_1 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.00000000000006724 85.0
DYD3_k127_1629321_0 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001754 335.0
DYD3_k127_1629321_1 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0000000000000000000000000000000000000000000000000000000000000000005576 231.0
DYD3_k127_1629321_2 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.000000000000000000000000000000000000000000000002118 193.0
DYD3_k127_1629321_3 rhodanese - - - 0.0000000000000000000000000000000002793 141.0
DYD3_k127_1629321_4 Multi-sensor signal transduction histidine kinase - - - 0.00000000003486 75.0
DYD3_k127_1646799_0 Belongs to the alpha-IPM synthase homocitrate synthase family K10977 - 2.3.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003851 342.0
DYD3_k127_1646799_2 COG0784 FOG CheY-like receiver - - - 0.000001311 56.0
DYD3_k127_1646799_3 - - - - 0.00001705 54.0
DYD3_k127_16582_0 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002343 317.0
DYD3_k127_16582_1 COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes K00382 - 1.8.1.4 0.0000000000000000000003614 98.0
DYD3_k127_16582_2 PFAM Uracil-DNA glycosylase superfamily K10800 - - 0.000000000000000001033 96.0
DYD3_k127_16582_3 Low affinity iron permease - - - 0.000000000000381 76.0
DYD3_k127_1665239_0 tRNA synthetases class II (D, K and N) K01893 - 6.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001582 284.0
DYD3_k127_1665239_1 CarboxypepD_reg-like domain - - - 0.00007672 54.0
DYD3_k127_1665688_0 PFAM UBA THIF-type NAD FAD binding K21147 - 2.7.7.80,2.8.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006203 558.0
DYD3_k127_1665688_1 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009756 375.0
DYD3_k127_1665688_10 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 GO:0003674,GO:0003824,GO:0008110,GO:0008483,GO:0016740,GO:0016769 2.6.1.9 0.00000000000000000000000000000000000000000000000000000578 208.0
DYD3_k127_1665688_11 Enoyl-CoA hydratase/isomerase K15866 - 5.3.3.18 0.0000000000000000000000000000000000000000000000000001668 196.0
DYD3_k127_1665688_12 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.00000000000000000000000000000000000000000000000198 180.0
DYD3_k127_1665688_13 Histidine biosynthesis bifunctional protein hisIE K11755 - 3.5.4.19,3.6.1.31 0.00000000000000000000000000000000000000000000003786 177.0
DYD3_k127_1665688_14 Imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.0000000000000000000000000000000000000000000002083 173.0
DYD3_k127_1665688_15 PFAM thioesterase superfamily - - - 0.000000000000000000000000000000000000007175 154.0
DYD3_k127_1665688_16 Ferredoxin - - - 0.000000000000000000000000000009213 123.0
DYD3_k127_1665688_17 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.0003904 53.0
DYD3_k127_1665688_18 PFAM blue (type 1) copper domain protein - - - 0.0005274 48.0
DYD3_k127_1665688_2 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008726 334.0
DYD3_k127_1665688_3 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001996 308.0
DYD3_k127_1665688_4 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000004659 268.0
DYD3_k127_1665688_5 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000000000000000006945 250.0
DYD3_k127_1665688_6 amidohydrolase K07045 - - 0.0000000000000000000000000000000000000000000000000000000000000000006143 240.0
DYD3_k127_1665688_7 COG0508 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes K00382,K01911 - 1.8.1.4,6.2.1.26 0.00000000000000000000000000000000000000000000000000000000000003777 225.0
DYD3_k127_1665688_8 DNA polymerase alpha chain like domain K04477 - - 0.00000000000000000000000000000000000000000000000000000000001512 213.0
DYD3_k127_1665688_9 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 - 5.3.1.16 0.0000000000000000000000000000000000000000000000000000004285 207.0
DYD3_k127_1676932_0 DEAD DEAH box helicase domain protein K10896 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000402 512.0
DYD3_k127_1676932_1 COG1502 Phosphatidylserine phosphatidylglycerophosphate cardiolipi n synthases and related enzymes - - - 0.00000000000000000000000000000000000000000000000000000005614 218.0
DYD3_k127_1676932_2 metallopeptidase activity - - - 0.00000000000000000000000000005859 127.0
DYD3_k127_1676932_3 membrane protein (homolog of Drosophila rhomboid) - - - 0.000000000000000005076 96.0
DYD3_k127_1676932_4 CheY-like receiver AAA-type ATPase and DNA-binding domains - - - 0.00000006541 59.0
DYD3_k127_1681501_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 2.495e-296 923.0
DYD3_k127_1681501_1 PFAM glycoside hydrolase family 77 K00705 - 2.4.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001771 470.0
DYD3_k127_1681501_2 TIGRFAM malto-oligosyltrehalose trehalohydrolase K01236 - 3.2.1.141 0.000000000000009765 80.0
DYD3_k127_1684056_0 prohibitin homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003329 295.0
DYD3_k127_1684056_1 Involved in DNA repair and in homologous recombination. May regulate the cleavage reactions of the branch-structured DNA. Has a very weak ATPase activity that is not stimulated by DNA. Binds DNA but does not promote DNA strands exchange K04484 - - 0.000000000000000000000000000000000000000000008133 176.0
DYD3_k127_1684056_2 PFAM regulatory protein, ArsR - - - 0.000000000000000001596 96.0
DYD3_k127_1684056_3 protein conserved in archaea - - - 0.000000000000006318 89.0
DYD3_k127_1684056_4 NfeD-like C-terminal, partner-binding - - - 0.0000000001625 70.0
DYD3_k127_1691869_0 dna ligase K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002284 376.0
DYD3_k127_1691869_1 ATP dependent DNA ligase domain protein K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000486 276.0
DYD3_k127_1691869_2 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003653 263.0
DYD3_k127_1699554_0 COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases - - - 0.00000000000000000000000000000000000000000000000000000000000000000003247 244.0
DYD3_k127_1699554_1 COG0451 Nucleoside-diphosphate-sugar epimerases K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000003236 239.0
DYD3_k127_1699554_2 - - - - 0.00000000000000000000000000000003155 143.0
DYD3_k127_1699554_3 nucleotidyltransferase activity K07075 - - 0.00000000000000000000000000000005569 128.0
DYD3_k127_1699554_4 Lysylphosphatidylglycerol synthase TM region - - - 0.0000000000000000000000000002964 129.0
DYD3_k127_1699554_5 Protein of unknown function DUF86 - - - 0.0000000007297 64.0
DYD3_k127_1747288_0 Phospholipase_D-nuclease N-terminal - - - 0.00000002256 58.0
DYD3_k127_1747288_1 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.0000002157 54.0
DYD3_k127_1747288_2 flagella protein K07327 - - 0.0001613 52.0
DYD3_k127_1747288_3 Polyketide cyclase / dehydrase and lipid transport - - - 0.0002898 49.0
DYD3_k127_1754275_0 Type II secretion system K07333 - - 0.0000000000000000000000000000000000000001294 169.0
DYD3_k127_1754275_1 - - - - 0.00001041 57.0
DYD3_k127_1759898_0 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000592 265.0
DYD3_k127_1759898_1 Glycosyl transferases group 1 K13057 - 2.4.1.245 0.0000000000000000000000000000000000001172 148.0
DYD3_k127_1761530_0 COG3794 Plastocyanin - - - 0.0000000000000003823 89.0
DYD3_k127_1761530_1 - - - - 0.000000005066 61.0
DYD3_k127_1798012_0 PFAM Phenylalanine and histidine ammonia-lyase K01745,K10775 GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009072,GO:0009698,GO:0009699,GO:0009800,GO:0009803,GO:0009987,GO:0016043,GO:0016053,GO:0016829,GO:0016840,GO:0016841,GO:0019438,GO:0019748,GO:0019752,GO:0022607,GO:0032787,GO:0042537,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044550,GO:0045548,GO:0046394,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 4.3.1.24,4.3.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004134 547.0
DYD3_k127_1798012_1 PFAM Amidohydrolase family K01468 - 3.5.2.7 0.000000000000000000004975 95.0
DYD3_k127_1798012_2 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 0.000000000000000000505 87.0
DYD3_k127_1811385_0 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001362 276.0
DYD3_k127_1811385_1 Sodium/hydrogen exchanger family K03455 - - 0.000000000000000000000000000002718 134.0
DYD3_k127_1811385_2 PFAM TrkA-C domain K07228 - - 0.00000000000000001401 89.0
DYD3_k127_1811385_3 Sodium hydrogen exchanger K11105 - - 0.00000000000002537 82.0
DYD3_k127_1811385_4 - - - - 0.0000003716 51.0
DYD3_k127_1811385_5 nucleic acid-binding protein, contains PIN domain K07065 - - 0.0000005811 60.0
DYD3_k127_1811385_6 - - - - 0.00005153 47.0
DYD3_k127_1818445_0 Thiolase, N-terminal domain K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000242 493.0
DYD3_k127_1818445_1 Aldolase/RraA K13831 - 4.1.2.43,5.3.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002867 445.0
DYD3_k127_1818445_2 acyl-CoA dehydrogenase K00248 - 1.3.8.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002104 400.0
DYD3_k127_1818445_3 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000187 157.0
DYD3_k127_1818445_4 nucleic acid binding protein containing the AN1-type Zn-finger K07059 - - 0.000000000000000000000000000000008874 136.0
DYD3_k127_1818445_5 ACT domain - - - 0.00006006 55.0
DYD3_k127_1832513_0 AhpC/TSA family - - - 0.00000000000000000000000000000000000000000000000000000001259 207.0
DYD3_k127_1832513_1 PFAM cytochrome c biogenesis protein, transmembrane region K06196 - - 0.000000000000000000000000000000000000000000004567 174.0
DYD3_k127_1919112_0 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000002215 251.0
DYD3_k127_192383_0 Helix-hairpin-helix motif K07572 - - 0.000000000000000000000000000000000000000000000000000000000001817 214.0
DYD3_k127_192383_1 Specifically dimethylates two adjacent adenosines in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.0000000000000000000000000000000000000000000000000003585 198.0
DYD3_k127_192383_2 PFAM methyltransferase small K02493 - 2.1.1.297 0.00000000000000000000000000003091 124.0
DYD3_k127_1928669_0 small GTP-binding protein K06945 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007444 274.0
DYD3_k127_1928669_1 HD domain - - - 0.000000000000000000001968 103.0
DYD3_k127_1928669_2 Roadblock LC7 family protein K06945,K07131 - - 0.00000007062 60.0
DYD3_k127_1928688_0 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002106 272.0
DYD3_k127_1928688_1 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000005513 246.0
DYD3_k127_1928688_2 RNA-binding protein of the translin family K07477 - - 0.00000000000000000000007766 107.0
DYD3_k127_1944907_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 - 6.1.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005101 530.0
DYD3_k127_1944907_1 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003229 271.0
DYD3_k127_1944907_2 protein conserved in bacteria K08971 - - 0.000000000002139 76.0
DYD3_k127_1944907_3 transport - - - 0.000000007173 67.0
DYD3_k127_1944907_4 ergosterol biosynthetic process K02291,K18163 - 2.5.1.32,2.5.1.99 0.000004835 58.0
DYD3_k127_1944907_5 Outer membrane receptor for ferrienterochelin and colicins K16089 - - 0.000336 52.0
DYD3_k127_1944907_6 Uncharacterized protein conserved in archaea (DUF2240) - - - 0.0006818 51.0
DYD3_k127_1956754_0 Aminotransferase K00812,K22457 GO:0003674,GO:0003824,GO:0008483,GO:0016740,GO:0016769,GO:0047297 2.6.1.1,2.6.1.14 0.000000000000000000000000000000000000000000000000000000000000000521 235.0
DYD3_k127_1956754_1 protein conserved in archaea - - - 0.000000000004354 78.0
DYD3_k127_1956754_2 A G-specific adenine glycosylase K03575 - - 0.000001234 53.0
DYD3_k127_1976211_0 Relaxes both positive and negative superturns and exhibits a strong decatenase activity K03167 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 5.99.1.3 3.883e-200 645.0
DYD3_k127_1976211_1 Relaxes both positive and negative superturns and exhibits a strong decatenase activity K03166 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003916,GO:0003918,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005488,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016788,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0016889,GO:0016894,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0061505,GO:0071704,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901363 5.99.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006708 509.0
DYD3_k127_1976211_2 Galactose oxidase, central domain K08282 - 2.7.11.1 0.000000000003404 81.0
DYD3_k127_1976211_3 histidine kinase, dimerisation and phosphoacceptor region - - - 0.000167 53.0
DYD3_k127_2017440_0 ATP-grasp domain K01903 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003939 349.0
DYD3_k127_2017440_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009507 327.0
DYD3_k127_2017440_10 protein involved in tolerance to K03926 - - 0.00000000000000004331 86.0
DYD3_k127_2017440_2 Peptidase family M50 - - - 0.0000000000000000000000000000000000000000000000000000000000000343 229.0
DYD3_k127_2017440_3 Catalyzes the conversion of N-formimidoyl-L-glutamate to L-glutamate and formamide K01479 - 3.5.3.8 0.000000000000000000000000000000000000000000000000000000001035 218.0
DYD3_k127_2017440_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000008117 213.0
DYD3_k127_2017440_5 PFAM amidohydrolase K01468 - 3.5.2.7 0.0000000000000000000000000000000000000000000000000007864 190.0
DYD3_k127_2017440_6 Domain of unknown function (DUF373) K08975 - - 0.0000000000000000000000000000000000000000003307 172.0
DYD3_k127_2017440_7 archaeal coiled-coil protein - - - 0.0000000000000000000000000000000000000002907 160.0
DYD3_k127_2017440_8 Catalyzes the transfer of diphosphate from ATP to 6- hydroxymethyl-7,8-dihydropterin (6-HMD), leading to 6- hydroxymethyl-7,8-dihydropterin diphosphate (6-HMDP) K07142 - 2.7.6.3 0.000000000000000000000000000000000000003603 154.0
DYD3_k127_2017440_9 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.00000000000000000002458 107.0
DYD3_k127_2018715_0 Domain of unknown function DUF87 K06915,K19172 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002656 492.0
DYD3_k127_2018715_1 SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity K03547,K05970 - 3.1.1.53 0.000000000000000000000000000000000000000000000000000000000000000001197 241.0
DYD3_k127_2018715_2 Bacteriocin-protection protein - - - 0.000000000000000000000000000000000000000000000001353 190.0
DYD3_k127_2018715_3 Putative exonuclease SbcCD, C subunit K03546 - - 0.000000000000000000000000000006271 128.0
DYD3_k127_2018715_4 - - - - 0.0000000000000528 80.0
DYD3_k127_2018715_5 NurA - - - 0.0000000001622 72.0
DYD3_k127_2018715_6 Peptidase family M28 K19702 - 3.4.11.24 0.00000002305 66.0
DYD3_k127_2018715_7 endonuclease activity K04799 GO:0000723,GO:0000724,GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004521,GO:0004523,GO:0004527,GO:0004529,GO:0004536,GO:0004540,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005739,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006302,GO:0006310,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007063,GO:0008150,GO:0008152,GO:0008309,GO:0008409,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009650,GO:0009987,GO:0010564,GO:0010638,GO:0016043,GO:0016070,GO:0016787,GO:0016788,GO:0016796,GO:0016888,GO:0016891,GO:0016893,GO:0016895,GO:0017108,GO:0019439,GO:0019725,GO:0022402,GO:0022616,GO:0031974,GO:0031981,GO:0032200,GO:0032201,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033260,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0042592,GO:0043137,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044786,GO:0045787,GO:0045876,GO:0046483,GO:0046700,GO:0048256,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051276,GO:0051716,GO:0051726,GO:0051983,GO:0051984,GO:0060249,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0071840,GO:0090068,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140097,GO:0140098,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1901576,GO:2001252 - 0.00001327 53.0
DYD3_k127_2025501_0 carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity K01955 - 6.3.5.5 1.773e-234 740.0
DYD3_k127_2025501_1 Belongs to the CarA family K01956 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002926 374.0
DYD3_k127_2025501_2 PFAM 8-oxoguanine DNA glycosylase K03660 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000003021 213.0
DYD3_k127_2025501_3 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.0000000000000000000000000000000000000133 154.0
DYD3_k127_2025501_4 structural constituent of ribosome K02984 - - 0.00006381 46.0
DYD3_k127_204899_0 Electron transfer flavoprotein alpha subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006099 362.0
DYD3_k127_204899_1 Electron transfer flavoprotein, beta subunit K03521 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 325.0
DYD3_k127_204899_2 Nickel-containing superoxide dismutase - - - 0.0000000000000000000000000000000000000007284 154.0
DYD3_k127_204899_3 Glycosyl transferases group 1 K13057 - 2.4.1.245 0.000000000000000000000000000000009957 130.0
DYD3_k127_204899_4 Signal peptidase, peptidase S26 K03100 - 3.4.21.89 0.0000000000001925 79.0
DYD3_k127_2065984_0 PhoQ Sensor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002072 491.0
DYD3_k127_2065984_1 His Kinase A (phosphoacceptor) domain - - - 0.0000001793 57.0
DYD3_k127_2065984_2 Transmembrane exosortase (Exosortase_EpsH) - - - 0.00001684 56.0
DYD3_k127_2065984_3 Pectinesterase K01051 - 3.1.1.11 0.00004061 51.0
DYD3_k127_2071574_0 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001849 317.0
DYD3_k127_2071574_1 Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation K07130 GO:0003674,GO:0003824,GO:0004061,GO:0005488,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019439,GO:0019441,GO:0019752,GO:0032787,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043167,GO:0043169,GO:0043420,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0070189,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 3.5.1.9 0.00000000000000000000000000000000000000004018 160.0
DYD3_k127_2071574_2 Methyltransferase domain - - - 0.0000000000000000000000000000000000000004568 156.0
DYD3_k127_2071574_3 Thioesterase-like superfamily - - - 0.000000000000000000000000000000000001026 147.0
DYD3_k127_2071574_4 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.000000000000008174 86.0
DYD3_k127_2071574_5 TonB dependent receptor - - - 0.00000006037 64.0
DYD3_k127_2074824_0 Thiolase, N-terminal domain K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 434.0
DYD3_k127_2074824_1 nucleic-acid-binding protein containing a Zn-ribbon K07068 - - 0.000000000000007109 82.0
DYD3_k127_208469_0 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007156 290.0
DYD3_k127_208469_1 Transketolase, pyridine binding domain protein K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000001126 233.0
DYD3_k127_208469_2 PFAM Orotidine 5'-phosphate decarboxylase K13831 - 4.1.2.43,5.3.1.27 0.0000000000000000000001949 107.0
DYD3_k127_208469_3 - - - - 0.000000000000000000003704 104.0
DYD3_k127_208469_4 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.000000000001698 80.0
DYD3_k127_2113149_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002555 317.0
DYD3_k127_2113149_1 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.00000000000000000000000000000000000000000000000001772 182.0
DYD3_k127_2113149_2 Protein of unknown function DUF58 - - - 0.00000000000000001398 96.0
DYD3_k127_2113149_3 protein kinase activity - - - 0.0001167 55.0
DYD3_k127_2132473_0 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000006416 136.0
DYD3_k127_2132473_1 guanyl-nucleotide exchange factor activity K20276 - - 0.00003081 55.0
DYD3_k127_2132473_2 COGs COG4743 membrane protein - - - 0.0003884 52.0
DYD3_k127_2143007_0 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 2 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002135 445.0
DYD3_k127_2143007_1 Belongs to the OMP decarboxylase family. Type 2 subfamily K01591 GO:0003674,GO:0003824,GO:0004590,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001631 274.0
DYD3_k127_2143007_10 Sterol carrier protein - - - 0.0000000000003384 76.0
DYD3_k127_2143007_11 Subtilase family K13276,K17948 GO:0003674,GO:0003824,GO:0005575,GO:0005576,GO:0005623,GO:0016853,GO:0016854,GO:0016857,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 5.1.3.24 0.00001437 56.0
DYD3_k127_2143007_2 Amino acid permease K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005861 269.0
DYD3_k127_2143007_3 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000001153 211.0
DYD3_k127_2143007_4 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 GO:0000166,GO:0003674,GO:0003824,GO:0003951,GO:0005488,GO:0005524,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006741,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016311,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016788,GO:0016791,GO:0017076,GO:0018130,GO:0019178,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042578,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.23 0.000000000000000000000000000000000000000000000000000001058 204.0
DYD3_k127_2143007_5 Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ K06137 GO:0005575,GO:0005576 1.3.3.11 0.00000000000000000000000000000000000000000000000000001743 196.0
DYD3_k127_2143007_6 Functions by promoting the formation of the first peptide bond K03263 - - 0.00000000000000000000000000000000000000009587 157.0
DYD3_k127_2143007_7 Inositol monophosphatase family K01092 - 3.1.3.25 0.0000000000000000000000000000000000000009004 158.0
DYD3_k127_2143007_8 metal-dependent protease of the PAD1 JAB1 superfamily - - - 0.00000000000000000000000000000000191 135.0
DYD3_k127_2143007_9 TraB family - - - 0.00000000000000000000000000006485 133.0
DYD3_k127_215354_0 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 315.0
DYD3_k127_215354_1 PP-loop family K21947 - 2.8.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000002019 261.0
DYD3_k127_215354_2 Vault protein inter-alpha-trypsin domain K07114 - - 0.0000000000000000000000000000000000000000000000000000001231 218.0
DYD3_k127_215354_3 Bacterial capsule synthesis protein PGA_cap - - - 0.00005834 56.0
DYD3_k127_2162458_0 dithiol-disulfide isomerase involved in polyketide biosynthesis - - - 0.000000000000000000000000001304 124.0
DYD3_k127_2162458_1 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.0000000000000001653 81.0
DYD3_k127_2162458_2 thiolester hydrolase activity K07018 - - 0.000000000002575 76.0
DYD3_k127_2162458_3 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000095 58.0
DYD3_k127_2162458_4 - - - - 0.0003978 48.0
DYD3_k127_2169277_0 Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules K04763 - - 0.000000000000000000000001545 103.0
DYD3_k127_2169277_1 Aminotransferase class-V K04487 - 2.8.1.7 0.0000000000000000000000756 103.0
DYD3_k127_2169277_2 DNA binding protein K06930 - - 0.0000000000000000000005809 108.0
DYD3_k127_2198379_0 Acyl-CoA dehydrogenase, C-terminal domain K06446 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 324.0
DYD3_k127_2198379_1 electron transfer flavoprotein, alpha subunit K03522 - - 0.00000000000000000000000000000000000000000000000001876 193.0
DYD3_k127_2198379_2 electron transfer flavoprotein K03521 - - 0.000000000000000000000000001828 123.0
DYD3_k127_2239931_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004445 443.0
DYD3_k127_2239931_1 TIGRFAM phenylalanyl-tRNA synthetase, beta subunit K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.000003056 49.0
DYD3_k127_2259623_0 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009855 373.0
DYD3_k127_2259623_1 PFAM Aldo keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000933 301.0
DYD3_k127_2259623_2 ABC transporter transmembrane region K06147 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 289.0
DYD3_k127_2259623_3 Uncharacterized conserved protein (DUF2277) - - - 0.0000000000000000000000000000000824 126.0
DYD3_k127_2259623_4 His Kinase A (phosphoacceptor - - - 0.00000004686 63.0
DYD3_k127_2261760_0 Zn-dependent metallo-hydrolase RNA specificity domain K12574 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 362.0
DYD3_k127_2261760_1 HAD-superfamily hydrolase, subfamily IA, variant 1 K07025 - - 0.0000000000000000000000003576 123.0
DYD3_k127_2261760_2 protein conserved in archaea - - - 0.00003779 57.0
DYD3_k127_2261760_3 TonB-dependent receptor K02014 - - 0.0002397 52.0
DYD3_k127_2264338_0 AMP-binding enzyme C-terminal domain - - - 0.0000000009854 66.0
DYD3_k127_2264338_1 helix_turn_helix ASNC type K03718 - - 0.0002965 53.0
DYD3_k127_2266409_0 Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress - - - 0.000000000000000000000000000000000000000000002602 176.0
DYD3_k127_2266409_1 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000004054 123.0
DYD3_k127_2266409_2 bacterial-type flagellum-dependent cell motility - - - 0.000000000000000000000000009951 125.0
DYD3_k127_2266409_3 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000002025 60.0
DYD3_k127_2307341_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0004832,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000455 493.0
DYD3_k127_2307341_1 Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1-phosphate (G1P). The G1P thus generated is used as the glycerophosphate backbone of phospholipids in the cellular membranes of Archaea K00096 - 1.1.1.261 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003168 355.0
DYD3_k127_2307341_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000009133 235.0
DYD3_k127_2307341_3 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases K02503 - - 0.0000000000000000000000000000000000000005671 153.0
DYD3_k127_2307341_4 Belongs to the UPF0179 family K09730 - - 0.00000000000000000004792 98.0
DYD3_k127_2307341_5 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K10943 - - 0.0000000000001016 79.0
DYD3_k127_2307341_6 Membrane protein of unknown function DUF63 - - - 0.0000000000006567 81.0
DYD3_k127_2307341_7 protein conserved in archaea - - - 0.000000002782 70.0
DYD3_k127_2307341_8 guanyl-nucleotide exchange factor activity - - - 0.0000001399 64.0
DYD3_k127_2307341_9 TonB dependent receptor - - - 0.0001385 53.0
DYD3_k127_2326255_0 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006695 331.0
DYD3_k127_2326255_1 Converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate, the first intermediate in the biosynthesis of coenzyme methanopterin K17488 GO:0003674,GO:0003824,GO:0003933,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044682 3.5.4.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002532 297.0
DYD3_k127_2326255_2 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001207 284.0
DYD3_k127_2326255_3 DoxX K16937 - 1.8.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000007578 250.0
DYD3_k127_2326255_4 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000003648 238.0
DYD3_k127_2326255_5 PFAM polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000008996 142.0
DYD3_k127_2326255_6 Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes K03622 - - 0.000000000000000000000003386 107.0
DYD3_k127_2326255_7 Glycosyl transferase - - - 0.000000000000000000009546 105.0
DYD3_k127_2326255_8 Glycosyl transferase, family 2 - - - 0.00000000000004588 82.0
DYD3_k127_2326255_9 regulator of chromosome condensation, RCC1 - - - 0.000000001614 71.0
DYD3_k127_2342614_0 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003438 503.0
DYD3_k127_2342614_1 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001454 426.0
DYD3_k127_2342614_10 Thiopurine S-methyltransferase (TPMT) - - - 0.0000000000000000000000000000001076 132.0
DYD3_k127_2342614_11 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.0000000000000000000000000000002018 134.0
DYD3_k127_2342614_12 superoxide dismutase activity K04565 - 1.15.1.1 0.00000000000000000000000003033 115.0
DYD3_k127_2342614_13 Belongs to the LDH MDH superfamily K00024 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.1.1.37 0.00008963 47.0
DYD3_k127_2342614_14 TonB dependent receptor K02014 - - 0.0003891 51.0
DYD3_k127_2342614_15 LVIVD repeat - - - 0.000577 52.0
DYD3_k127_2342614_2 PFAM Transketolase K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 323.0
DYD3_k127_2342614_3 Transketolase, pyrimidine binding domain K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002634 331.0
DYD3_k127_2342614_4 calcium, potassium:sodium antiporter activity K07301 - - 0.0000000000000000000000000000000000000000000000000000000000000002683 237.0
DYD3_k127_2342614_5 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000008044 225.0
DYD3_k127_2342614_6 - - - - 0.000000000000000000000000000000000000000000001444 176.0
DYD3_k127_2342614_7 Cytochrome C assembly protein K02195 - - 0.00000000000000000000000000000000000000000001767 170.0
DYD3_k127_2342614_8 PFAM cytochrome c-type biogenesis protein CcmB K02194 - - 0.000000000000000000000000000000000003457 145.0
DYD3_k127_2342614_9 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000008047 144.0
DYD3_k127_2365186_0 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.00000000000000000000000000000000000000000000000000000000004689 213.0
DYD3_k127_2365186_1 Rieske (2fe-2S) K00499 - 1.14.15.7 0.000000000000000000000000000000000000000000000000000005119 207.0
DYD3_k127_2365186_2 Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs K07573 - - 0.00000000000000000000000000000000005529 141.0
DYD3_k127_2365186_3 Acetyltransferase (GNAT) domain - - - 0.000000000182 67.0
DYD3_k127_2396326_0 Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules K04483 GO:0000150,GO:0000217,GO:0000400,GO:0000724,GO:0000725,GO:0000730,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003697,GO:0003824,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006312,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009314,GO:0009628,GO:0009987,GO:0010212,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022607,GO:0033554,GO:0034622,GO:0034641,GO:0042148,GO:0042623,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0045003,GO:0046483,GO:0050896,GO:0051716,GO:0065003,GO:0065004,GO:0071704,GO:0071824,GO:0071840,GO:0090304,GO:0090735,GO:0097159,GO:0140097,GO:1901360,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009976 340.0
DYD3_k127_2396326_1 Belongs to the aldehyde dehydrogenase family K22187 - - 0.0000000000000000000000000000000000000000000000000000000000003959 215.0
DYD3_k127_2396326_2 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.00000000000000000000000000000000000000004039 157.0
DYD3_k127_2396326_3 transcriptional regulators - - - 0.00000000000000000000000007473 112.0
DYD3_k127_2396326_4 - - - - 0.00001094 49.0
DYD3_k127_2402502_0 Polymer-forming cytoskeletal - - - 0.0000000000000000000000000000000000000000000000000000002408 208.0
DYD3_k127_2432946_0 repeat protein - - - 0.00007216 55.0
DYD3_k127_2456207_0 Conserved repeat domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001398 512.0
DYD3_k127_2456207_1 - - - - 0.0000000000000000000000000000000000000000000003366 188.0
DYD3_k127_2456207_2 domain protein - - - 0.000000000000000000000000000187 134.0
DYD3_k127_2456207_3 Thioesterase superfamily - - - 0.0000000000001536 76.0
DYD3_k127_2456207_4 protein phosphatase 2C domain protein - - - 0.0000000000002988 75.0
DYD3_k127_2456207_5 Domain of unknown function (DUF4332) - - - 0.0000000001776 72.0
DYD3_k127_2456207_6 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000004675 49.0
DYD3_k127_2456207_7 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.0005807 50.0
DYD3_k127_2461753_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 8.761e-299 933.0
DYD3_k127_2461753_1 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004903 249.0
DYD3_k127_2461753_2 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.00000000000008793 81.0
DYD3_k127_2461753_3 Sodium hydrogen exchanger K11105 - - 0.000000000225 69.0
DYD3_k127_2461753_5 ParE toxin of type II toxin-antitoxin system, parDE K06218 - - 0.0000006295 55.0
DYD3_k127_2461753_6 HEPN domain K09132 - - 0.0001375 50.0
DYD3_k127_2475252_0 Belongs to the peptidase S16 family K04076 - 3.4.21.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009516 519.0
DYD3_k127_2475252_1 Xaa-Pro dipeptidyl-peptidase K01281 - 3.4.14.11 0.0000000000000002601 93.0
DYD3_k127_2512237_0 Transcriptional regulator, ArsR family - - - 0.000000000000000001479 96.0
DYD3_k127_2512237_1 SOS response associated peptidase (SRAP) - - - 0.000001244 59.0
DYD3_k127_2526458_0 Dehydrogenase E1 component K00161,K00166 - 1.2.4.1,1.2.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005584 369.0
DYD3_k127_2526458_1 Purple acid Phosphatase, N-terminal domain - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000002322 168.0
DYD3_k127_2526458_2 COG1846 Transcriptional regulators - - - 0.000000000000000000000003336 108.0
DYD3_k127_2526458_3 sequence-specific DNA binding - - - 0.00000000000000006262 91.0
DYD3_k127_2577043_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03056 - 2.7.7.6 0.00000000002351 68.0
DYD3_k127_2577043_1 Transcriptional regulator - - - 0.000000000147 75.0
DYD3_k127_2577043_2 domain protein - - - 0.00002923 55.0
DYD3_k127_2584048_0 exo-alpha-(2->6)-sialidase activity - - - 0.0000000000000000000000002378 123.0
DYD3_k127_2584048_1 BNR repeat-like domain - - - 0.00000000000000000000008739 113.0
DYD3_k127_2584048_2 - - - - 0.000000000005627 69.0
DYD3_k127_2584048_3 - - - - 0.000172 49.0
DYD3_k127_2606979_0 Threonine aldolase K01620 - 4.1.2.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007116 313.0
DYD3_k127_2606979_1 Fumarylacetoacetate (FAA) hydrolase family K01826 - 5.3.3.10 0.00000000000000000000000000000000000000000000000000000000000000000000000002439 264.0
DYD3_k127_2606979_2 membrane - - - 0.000000002667 67.0
DYD3_k127_2606979_3 membrane - - - 0.00004291 53.0
DYD3_k127_2606979_4 PFAM Molybdopterin dehydrogenase, FAD-binding K11178 - 1.17.1.4 0.0002511 49.0
DYD3_k127_2606979_5 Bacterial PH domain - - - 0.0006243 51.0
DYD3_k127_2611451_0 Bacterial extracellular solute-binding protein K02064 - - 0.0000000000000000000000000000000000000000000000000000000000001121 230.0
DYD3_k127_2611451_1 Binding-protein-dependent transport system inner membrane component K02063 - - 0.000000000000000000000000000000000000000000000000006728 190.0
DYD3_k127_2611451_2 Thiamine-phosphate synthase K22206 - - 0.00000000000000000000000000000000001101 147.0
DYD3_k127_2611451_3 Anion-transporting ATPase - - - 0.000000000000000000000000000000001655 143.0
DYD3_k127_2611451_4 COG0500 SAM-dependent methyltransferases - - - 0.0000000000000000000000000004752 124.0
DYD3_k127_2611451_5 Peptidase family M28 - - - 0.000000000001798 78.0
DYD3_k127_2611451_6 Predicted membrane protein (DUF2085) - - - 0.00000001549 64.0
DYD3_k127_2613047_0 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000003201 213.0
DYD3_k127_2613047_1 Sodium hydrogen exchanger - - - 0.0000000000000000000000000000000000000000000000000006113 200.0
DYD3_k127_2613047_2 Catalyzes the reversible phosphorylation of S-methyl-5'- thioinosine (MTI) to hypoxanthine and 5-methylthioribose-1- phosphate. Involved in the breakdown of S-methyl-5'-thioadenosine (MTA), a major by-product of polyamine biosynthesis. Catabolism of (MTA) occurs via deamination to MTI and phosphorolysis to hypoxanthine K00772 - 2.4.2.28 0.0000000000000000000000000000000000000000004491 172.0
DYD3_k127_2613047_3 transcriptional - - - 0.000000000000000000000000000000000000000009621 156.0
DYD3_k127_2613047_4 Activator of Hsp90 ATPase 1 family protein - - - 0.0000000000000000000000000000000000000006445 153.0
DYD3_k127_2613047_5 arsR family - - - 0.000000000000000000001276 97.0
DYD3_k127_2613047_6 Activator of Hsp90 ATPase - - - 0.00000000000000001738 95.0
DYD3_k127_2613047_7 - - - - 0.00000000000002592 76.0
DYD3_k127_2613047_8 protein conserved in archaea - - - 0.0000000001778 72.0
DYD3_k127_2617768_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003185 571.0
DYD3_k127_2617768_1 PFAM PUA domain containing protein K07557 - 2.6.1.97 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 299.0
DYD3_k127_2617768_2 Elongator protein 3, MiaB family, Radical SAM K06936 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002951 291.0
DYD3_k127_2645450_0 Isocitrate lyase K01637 - 4.1.3.1 1.866e-207 661.0
DYD3_k127_2645450_1 Belongs to the malate synthase family K01638 - 2.3.3.9 0.000000000000000000000000000000000000000000000000000000000001409 213.0
DYD3_k127_2655637_0 transposase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 350.0
DYD3_k127_2655637_1 Tubulin/FtsZ family, GTPase domain K22222 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000677 297.0
DYD3_k127_2655637_2 Carbon-nitrogen hydrolase - - - 0.00000003619 60.0
DYD3_k127_2689505_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00260,K00261,K00262 GO:0003674,GO:0003824,GO:0004352,GO:0004353,GO:0004354,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016638,GO:0016639,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.2,1.4.1.3,1.4.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004811 563.0
DYD3_k127_2689505_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004223 347.0
DYD3_k127_2689505_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000005835 138.0
DYD3_k127_2689505_3 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.000000000000000000000000000000004395 142.0
DYD3_k127_2689505_4 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.0001081 53.0
DYD3_k127_2689505_5 Carboxypeptidase regulatory-like domain - - - 0.0001305 53.0
DYD3_k127_2689505_6 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.000525 51.0
DYD3_k127_2708013_0 Glycosyl transferase family group 2 K00694 - 2.4.1.12 0.00000000000000000000000000000000000000000000000000000000000000002137 250.0
DYD3_k127_2708013_1 4-vinyl reductase, 4VR - - - 0.000002302 55.0
DYD3_k127_2708399_0 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.0000000000000000000000000000000000000000000000001492 190.0
DYD3_k127_2708399_1 PFAM Homoserine dehydrogenase K00003 - 1.1.1.3 0.0000000000000000000000000000000336 136.0
DYD3_k127_2708399_2 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 0.00000000000000000000001608 116.0
DYD3_k127_2730348_0 electron transfer flavoprotein, alpha subunit K03522 - - 0.00000000000000000000000000000000000000000000000000000000000000009787 233.0
DYD3_k127_2730348_1 RIO-like kinase K07178 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000002615 215.0
DYD3_k127_2730348_2 K homology RNA-binding domain K06961 - - 0.000000000000000000000000000000000000000000000001293 184.0
DYD3_k127_2730348_3 Electron transfer flavoprotein domain K03521 - - 0.00000002806 58.0
DYD3_k127_2730348_4 - - - - 0.000001232 54.0
DYD3_k127_2734115_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008767 362.0
DYD3_k127_2734115_1 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007461 343.0
DYD3_k127_2739535_0 PFAM Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 476.0
DYD3_k127_2763856_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003015 395.0
DYD3_k127_2763856_1 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000000000000000000000000000000001768 161.0
DYD3_k127_2763856_2 Aminotransferase - - - 0.00000000000000000000004374 102.0
DYD3_k127_2794788_0 Belongs to the glycosyl hydrolase family 6 K01179,K20276,K21449 - 3.2.1.4 0.000000000000000000000000000000000000000006807 176.0
DYD3_k127_2794788_1 response regulator, receiver - - - 0.00000000000000000001057 97.0
DYD3_k127_2800468_0 exo-alpha-(2->6)-sialidase activity - - - 0.000000006092 68.0
DYD3_k127_2800468_1 protein conserved in archaea - - - 0.0006316 53.0
DYD3_k127_2801537_0 ATPase which is responsible for recognizing, binding, unfolding and translocation of substrate proteins into the archaeal 20S proteasome core particle. Is essential for opening the gate of the 20S proteasome via an interaction with its C- terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. Unfolding activity requires energy from ATP hydrolysis, whereas ATP binding alone promotes ATPase-20S proteasome association which triggers gate opening, and supports translocation of unfolded substrates K03420 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000482 447.0
DYD3_k127_2801537_1 Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val) K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000003988 276.0
DYD3_k127_2801537_2 TIGRFAM Sua5 YciO YrdC YwlC family protein K07566 - 2.7.7.87 0.000000000000000000000000000000000000001981 154.0
DYD3_k127_2801537_3 PFAM helix-turn-helix domain protein K03627 - - 0.000000000000000000246 94.0
DYD3_k127_2801537_4 Transcriptional regulator, ArsR family - - - 0.00000000000000000106 92.0
DYD3_k127_2801537_5 WD40-like Beta Propeller Repeat - - - 0.00000004502 66.0
DYD3_k127_2814021_0 COG2366 Protein related to penicillin acylase K07116 - 3.5.1.97 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 589.0
DYD3_k127_2814021_1 Thiolase, N-terminal domain K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004348 432.0
DYD3_k127_2814021_2 Belongs to the UPF0219 family K01641 - 2.3.3.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 428.0
DYD3_k127_2814021_3 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR - - - 0.0000000000000000000000000000000000000000000000000005361 207.0
DYD3_k127_2814021_4 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.00000000000000000000000000000000000000000000005349 173.0
DYD3_k127_2814021_5 Peptidase family M28 - - - 0.0000000000004743 81.0
DYD3_k127_2814021_6 - - - - 0.00000002583 63.0
DYD3_k127_2814021_7 Domain of unknown function (DUF4332) - - - 0.000001359 60.0
DYD3_k127_2814021_8 - - - - 0.000002067 55.0
DYD3_k127_282318_0 guanyl-nucleotide exchange factor activity - - - 0.000000000005951 72.0
DYD3_k127_282318_1 Belongs to the HesB IscA family K13628 - - 0.0000000001218 66.0
DYD3_k127_2826524_0 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007574 342.0
DYD3_k127_2826524_1 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000004445 252.0
DYD3_k127_2826524_2 Binding-protein-dependent transport system inner membrane component K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000002672 233.0
DYD3_k127_2826524_3 Plays a role in the regulation of phosphate uptake K02039 - - 0.000000000000000000000000000000000000000000000002186 190.0
DYD3_k127_2826524_4 Phosphate uptake regulator, PhoU - - - 0.0000000000000000000000000000000000000000000000389 182.0
DYD3_k127_2826524_5 PFAM Methylenetetrahydrofolate reductase - - - 0.0000000000000004783 83.0
DYD3_k127_2827896_0 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0008150,GO:0008152,GO:0009058,GO:0016051,GO:0016491,GO:0016620,GO:0016903,GO:0019318,GO:0019319,GO:0036094,GO:0043891,GO:0044238,GO:0044281,GO:0044283,GO:0046364,GO:0048037,GO:0050661,GO:0050662,GO:0051287,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576 1.2.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006822 400.0
DYD3_k127_2827896_1 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002992 302.0
DYD3_k127_2827896_2 Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate K01497 - 3.5.4.25 0.00000000000000000000000000000000000000000000000000000000000000000000008203 250.0
DYD3_k127_2827896_3 PFAM Glyoxalase bleomycin resistance protein dioxygenase K07104 - 1.13.11.2 0.000000000000000000000000000000000000000000000000000000011 202.0
DYD3_k127_2827896_4 cellulose binding - - - 0.00000000000000000000000000000000000000000000002058 177.0
DYD3_k127_2827896_5 lactoylglutathione lyase activity K01759 - 4.4.1.5 0.0000000000000000000000000000000000000007819 156.0
DYD3_k127_2827896_6 LVIVD repeat - - - 0.000000000000000000009533 106.0
DYD3_k127_2827896_7 ThiS family K03636 - - 0.00000000000379 72.0
DYD3_k127_2827896_8 - - - - 0.00000003121 62.0
DYD3_k127_283317_0 TIGRFAM geranylgeranyl reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000001059 244.0
DYD3_k127_283317_1 Bacterial phospho-glucose isomerase C-terminal SIS domain K15916 - 5.3.1.8,5.3.1.9 0.00000000000000000000000000000000000000000000001125 187.0
DYD3_k127_283317_2 Belongs to the UPF0215 family K09120 - - 0.000000000000000000000000000000000000002499 154.0
DYD3_k127_283317_3 Peptidyl-tRNA hydrolase PTH2 K04794 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 3.1.1.29 0.00000000000000000000000000000000002472 138.0
DYD3_k127_283317_4 Protein of unknown function (DUF531) K09725 - - 0.0000000000000000000000000000004281 126.0
DYD3_k127_283317_5 - - - - 0.000008923 53.0
DYD3_k127_2834249_0 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002439 284.0
DYD3_k127_2834249_1 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000008626 197.0
DYD3_k127_2834249_2 COG0785 Cytochrome c biogenesis protein - - - 0.0000000000002042 83.0
DYD3_k127_2834249_3 Thiol-disulfide isomerase and - - - 0.0000000002242 73.0
DYD3_k127_2897485_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001188 376.0
DYD3_k127_2897485_1 ATPases associated with a variety of cellular activities K02003 - - 0.00000000000000000000000000000000000000000000001498 184.0
DYD3_k127_2897485_2 Protein of unknown function DUF58 - - - 0.00000000000000000000000000000000000000001197 169.0
DYD3_k127_2897485_3 Transglutaminase-like superfamily - - - 0.000000000000000000001985 111.0
DYD3_k127_2897485_4 MacB-like periplasmic core domain K09808 - - 0.0000111 58.0
DYD3_k127_2928740_0 Voltage gated chloride channel K03281 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000295 321.0
DYD3_k127_2928740_1 Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate K06989 - 1.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000004885 233.0
DYD3_k127_2928740_2 Peptidase inhibitor I9 K17734 - - 0.00000000000000000000000000000000000000005336 169.0
DYD3_k127_2928740_3 Belongs to the class-I aminoacyl-tRNA synthetase family K04566 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.6 0.0000000000000000000000000003777 120.0
DYD3_k127_2978748_0 C-terminal region of MMR_HSR1 domain K06944 - - 0.0000000000000000000000000000000000000000003564 162.0
DYD3_k127_2978748_1 Domain of unknown function (DUF4430) - - - 0.00005689 52.0
DYD3_k127_2978748_2 Large extracellular alpha-helical protein K06894,K08693 - 3.1.3.5,3.1.3.6,3.1.4.16 0.0001156 53.0
DYD3_k127_2980400_0 ATPases associated with a variety of cellular activities K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 294.0
DYD3_k127_2980400_1 Enoyl-(Acyl carrier protein) reductase K00208 - 1.3.1.10,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000001055 251.0
DYD3_k127_2980400_2 Transport permease protein K01992 - - 0.00000000000000000000000000001591 128.0
DYD3_k127_2980400_3 Chalcone and stilbene synthases, C-terminal domain - - - 0.0003186 50.0
DYD3_k127_2980545_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703,K16792 - 4.2.1.114,4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005426 483.0
DYD3_k127_2980545_1 Chalcone and stilbene synthases, N-terminal domain K16167 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004681 289.0
DYD3_k127_2980545_2 COG0733 Na -dependent transporters of the SNF family K03308 - - 0.000000000000000000000000000000000000000000000000000000000000000000003366 250.0
DYD3_k127_2980545_3 PFAM isocitrate isopropylmalate dehydrogenase K05824 - 1.1.1.87 0.00000000000000000000000000000000000000000000000000000000000000000001996 256.0
DYD3_k127_2980545_4 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000003472 183.0
DYD3_k127_2980545_5 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a - - - 0.0000000000000000000000000000000000000000002358 169.0
DYD3_k127_2980545_6 Isoprenylcysteine carboxyl methyltransferase K16168 - - 0.0000000000000000000000005791 111.0
DYD3_k127_2980545_7 Carboxypeptidase regulatory-like domain - - - 0.00058 51.0
DYD3_k127_2992295_0 Histidine kinase - - - 0.000000000000000000000000000000000000000004636 170.0
DYD3_k127_2992295_1 PFAM Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000001023 89.0
DYD3_k127_2992295_2 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.0000000000000002588 81.0
DYD3_k127_3028122_0 Resolvase helix-turn-helix domain protein - - - 0.0000000000000001033 88.0
DYD3_k127_3028122_1 resolvase - - - 0.0002688 48.0
DYD3_k127_3047111_0 PFAM ABC transporter related K01990 - - 0.00000000000000000000000000000000000006266 149.0
DYD3_k127_3047111_1 COG1361 S-layer domain - - - 0.00000000000001301 87.0
DYD3_k127_3047111_2 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000002436 61.0
DYD3_k127_3049538_0 aconitate hydratase K01681 - 4.2.1.3 2.569e-320 999.0
DYD3_k127_3049538_1 Belongs to the glycosyl hydrolase 57 family - - - 3.902e-284 894.0
DYD3_k127_3049538_2 Domain of unknown function (DUF3459) K00700,K01236 - 2.4.1.18,3.2.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003002 519.0
DYD3_k127_3049538_3 PFAM Glycosyl transferase, family 20 K00697,K16055 - 2.4.1.15,2.4.1.347,3.1.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003464 520.0
DYD3_k127_3049538_4 Acetyltransferase (GNAT) domain K00619 - 2.3.1.1 0.000002505 59.0
DYD3_k127_3060414_0 Serine/Threonine protein kinases, catalytic domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000196 173.0
DYD3_k127_3060414_1 - - - - 0.00000000000000000000000000000008135 143.0
DYD3_k127_3060414_2 bacterial-type flagellum-dependent cell motility - - - 0.0000000000000000000000000000268 135.0
DYD3_k127_3060414_3 PFAM peptidase S8 and S53, subtilisin, kexin, sedolisin - - - 0.00001887 55.0
DYD3_k127_3060414_4 - - - - 0.0002447 49.0
DYD3_k127_3069643_0 Catalyzes the addition of molecular CO(2) and H(2)O to ribulose 1,5-bisphosphate (RuBP), generating two molecules of 3- phosphoglycerate (3-PGA). Functions in an archaeal AMP degradation pathway, together with AMP phosphorylase and R15P isomerase K01601 - 4.1.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009195 392.0
DYD3_k127_3069643_1 Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs K03177,K11131 - 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006838 338.0
DYD3_k127_3069643_2 Belongs to the eIF-2B alpha beta delta subunits family K18237 - 5.3.1.29 0.000000000000000000000000000000000000000000000000000000000000001247 232.0
DYD3_k127_3070142_0 Specifically catalyzes the AdoMet-dependent 2'-O-ribose methylation of cytidine at position 56 in tRNAs K07254 GO:0001510,GO:0002128,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.206 0.00000000000000000000000000000000000000000000000000002704 203.0
DYD3_k127_3070142_1 Catalyzes the CTP-dependent phosphorylation of riboflavin (vitamin B2) to form flavin mononucleotide (FMN) K07732 - 2.7.1.161 0.0000000000000000000000000000000000000000000000000001972 192.0
DYD3_k127_3070142_2 Zinc carboxypeptidase - - - 0.00000000000000000000000000000000000000473 168.0
DYD3_k127_3070142_3 Specifically catalyzes the AdoMet-dependent 2'-O-ribose methylation of cytidine at position 56 in tRNAs K07254 - 2.1.1.206 0.0000000000000000000000000000000002753 139.0
DYD3_k127_3070142_4 Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing elongation complexes. Seems to translocate with the RNA polymerase following initiation and acts by binding to the non template strand of the transcription bubble in elongation complexes K03136 - - 0.0000000000000000000004285 102.0
DYD3_k127_3070142_5 domain protein - - - 0.000000005469 64.0
DYD3_k127_3070142_6 TonB dependent receptor K02014 - - 0.000001323 60.0
DYD3_k127_3070838_0 Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline K01281 - 3.4.14.11 0.0000000000000000000000000000000000000000000000000000000000000201 238.0
DYD3_k127_3093379_0 Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB) K03124 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004888 525.0
DYD3_k127_3093379_1 Glycosyl transferase family 21 K07011 - - 0.000000000000000000000000000000000000000000000000000005528 202.0
DYD3_k127_3093379_2 Fumarylacetoacetate (FAA) hydrolase family - - - 0.0000000000000000000000000001829 120.0
DYD3_k127_3093379_3 PFAM Uncharacterised protein family UPF0150 - - - 0.0000000000002219 75.0
DYD3_k127_3093379_4 periplasmic or secreted lipoprotein K07339 - - 0.00000000003788 67.0
DYD3_k127_3094783_0 type II secretion system protein K07332 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007727 468.0
DYD3_k127_3094783_1 PFAM type II secretion system K07333 - - 0.0000000000000005986 85.0
DYD3_k127_3094783_2 PKD domain containing protein - - - 0.000009599 57.0
DYD3_k127_3102010_0 - - - - 0.0000000000000000000000000000000000001126 148.0
DYD3_k127_3102010_1 Phosphoribosyl transferase domain K07100 - - 0.000000000000000000000000000000000001012 149.0
DYD3_k127_3102010_2 Belongs to the universal stress protein A family - - - 0.00000000000000008396 91.0
DYD3_k127_3102010_3 - - - - 0.000000015 60.0
DYD3_k127_3102010_4 2TM domain - - - 0.00000005316 64.0
DYD3_k127_3102629_0 COG1077 Actin-like ATPase involved in cell morphogenesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006427 435.0
DYD3_k127_3102629_1 COG1077 Actin-like ATPase involved in cell morphogenesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002558 340.0
DYD3_k127_3102629_2 Domain of unknown function (DUF1508) - - - 0.00000000000000000000001676 114.0
DYD3_k127_3104769_0 Belongs to the peptidase M48B family K03799 - - 0.000000000000000000000000000000000000000000000000000004591 194.0
DYD3_k127_3104769_1 PRC-barrel domain - - - 0.00000000000001209 77.0
DYD3_k127_3104769_2 COG0463 Glycosyltransferases involved in cell wall biogenesis K07027 - - 0.00009831 53.0
DYD3_k127_3112299_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03047 - 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000002499 215.0
DYD3_k127_3112299_1 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.000000000000000000000000000000000000000000000000000000001728 208.0
DYD3_k127_3112299_2 Located on the platform of the 30S subunit K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000001625 199.0
DYD3_k127_3112299_3 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.000000000000000000000000000000000000002371 156.0
DYD3_k127_3112299_4 Filamentation induced by cAMP protein fic - - - 0.00000000000000000002497 102.0
DYD3_k127_3112299_5 response regulator K07315 - 3.1.3.3 0.000004166 56.0
DYD3_k127_3115421_0 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003698 361.0
DYD3_k127_3115421_1 SpoVT / AbrB like domain - - - 0.00002515 51.0
DYD3_k127_3115421_2 TonB-dependent receptor - - - 0.0003464 51.0
DYD3_k127_3131073_0 Catalyzes the conversion of AMP and phosphate to adenine and ribose 1,5-bisphosphate (R15P). Exhibits phosphorylase activity toward CMP and UMP in addition to AMP. Functions in an archaeal AMP degradation pathway, together with R15P isomerase and RubisCO K18931 - 2.4.2.57 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003798 487.0
DYD3_k127_3131073_1 Iron dependent K03709 - - 0.00000000000000000000241 98.0
DYD3_k127_3131073_2 regulator of amino acid metabolism, contains ACT domain K07103 - - 0.0000002405 54.0
DYD3_k127_3134556_0 Subtilase family K17734 - - 0.00000000000000000000000000000000000000000000000000000000000000005647 248.0
DYD3_k127_3134556_1 metal-dependent hydrolase with the TIM-barrel fold - - - 0.00007302 46.0
DYD3_k127_3136116_0 HELICc2 K03722,K10844 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003685 374.0
DYD3_k127_3136116_1 Ribosomal protein S8e K02995 GO:0000462,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042274,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044237,GO:0044238,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360,GO:1990904 - 0.00000000000000000000000000000000000002947 147.0
DYD3_k127_3136116_2 - - - - 0.000000000000000000000000005074 117.0
DYD3_k127_3136116_3 snRNP Sm proteins K04796 - - 0.000000000000000006609 86.0
DYD3_k127_3136116_4 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds directly to 7S RNA and mediates binding of the 54 kDa subunit of the SRP K03105 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0006605,GO:0006612,GO:0006613,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008312,GO:0015031,GO:0015833,GO:0033036,GO:0034613,GO:0042886,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0070727,GO:0071702,GO:0071705,GO:0072657,GO:0090150,GO:0097159,GO:1901363 - 0.000000000000004533 79.0
DYD3_k127_3136116_5 COG3291 FOG PKD repeat - - - 0.00008447 54.0
DYD3_k127_3152414_0 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 5.3.1.1 0.000000000000000000000000000000001235 136.0
DYD3_k127_3152414_1 - - - - 0.00000000000004929 82.0
DYD3_k127_3152414_2 ATPase involved in replication control, Cdc46 Mcm family - - - 0.000001176 56.0
DYD3_k127_3155272_0 protein conserved in archaea - - - 0.00000000000000000006176 102.0
DYD3_k127_315953_0 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.000000000000000000000000000000000000000471 160.0
DYD3_k127_315953_1 MoaE protein K03635 - 2.8.1.12 0.0000000000000000000000000002381 119.0
DYD3_k127_315953_2 - - - - 0.0003713 50.0
DYD3_k127_315953_3 May be involved in the biosynthesis of molybdopterin K03638 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0042802,GO:0044424,GO:0044444,GO:0044464 2.7.7.75 0.0006324 48.0
DYD3_k127_3176759_0 aminotransferase class I and II K00812,K10907,K14267 - 2.6.1.1,2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002538 296.0
DYD3_k127_3176759_1 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000001805 236.0
DYD3_k127_3176759_2 VIT family - - - 0.0000000000000000000000000000001218 130.0
DYD3_k127_3176759_3 binds to the 23S rRNA K02929 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000002235 119.0
DYD3_k127_3176759_4 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000002606 86.0
DYD3_k127_3176759_5 Ribosomal protein S27E K02978 - - 0.00000000000001689 74.0
DYD3_k127_3195498_0 Multicopper oxidase K00368 - 1.7.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 378.0
DYD3_k127_3195498_1 glyoxalase III activity - - - 0.0000000000000000000000000000000000000000000000000000002213 207.0
DYD3_k127_3195498_2 Transcriptional regulator - - - 0.00000000007646 70.0
DYD3_k127_3195498_3 - - - - 0.000005551 58.0
DYD3_k127_3208120_0 ABC transporter K09695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005504 309.0
DYD3_k127_3208120_1 PFAM ABC-2 type transporter K09694 - - 0.00000000000000000000000000000000000000000000000000000000000000001671 233.0
DYD3_k127_3208120_2 Cytochrome C assembly protein K02198 - - 0.00000000000000000000000000000000000000008048 175.0
DYD3_k127_3208120_3 short chain dehydrogenase K00059 - 1.1.1.100 0.0000000000000000000000000000001353 134.0
DYD3_k127_3208120_4 Thiamine biosynthesis protein (ThiI) K06920 - 6.3.4.20 0.000000000000000000001402 105.0
DYD3_k127_3208120_5 MscS Mechanosensitive ion channel - - - 0.00000001171 61.0
DYD3_k127_3210857_0 Amidohydrolase K07045 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000208 259.0
DYD3_k127_3210857_1 Phenazine biosynthesis-like protein K06998 - 5.3.3.17 0.00000000000000000000000000000000000000000000000000000003424 208.0
DYD3_k127_3210857_2 Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000000000000000000000001119 178.0
DYD3_k127_3210857_3 rRNA binding K00128,K02922,K06269,K07891,K09557 GO:0000184,GO:0000448,GO:0000460,GO:0000463,GO:0000466,GO:0000469,GO:0000470,GO:0000478,GO:0000479,GO:0000956,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006518,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0015031,GO:0015833,GO:0015934,GO:0016070,GO:0016071,GO:0016072,GO:0019222,GO:0019439,GO:0019538,GO:0019838,GO:0019843,GO:0022613,GO:0022625,GO:0022626,GO:0030684,GO:0030687,GO:0032991,GO:0033036,GO:0033365,GO:0034470,GO:0034613,GO:0034641,GO:0034645,GO:0034655,GO:0034660,GO:0042254,GO:0042273,GO:0042886,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045047,GO:0045184,GO:0046483,GO:0046700,GO:0046872,GO:0046907,GO:0046914,GO:0048519,GO:0050789,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0060255,GO:0065007,GO:0070727,GO:0070972,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1990904 1.2.1.3,3.1.3.16 0.00000000000002891 74.0
DYD3_k127_321244_0 Hydroxymethylglutaryl-CoA reductase, degradative K00054 - 1.1.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 416.0
DYD3_k127_321244_1 SdrD B-like domain - - - 0.000003397 56.0
DYD3_k127_321244_2 TonB-dependent receptor - - - 0.00001926 56.0
DYD3_k127_3239533_0 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA K00784 - 3.1.26.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000091 267.0
DYD3_k127_3239533_1 PFAM Xylose isomerase domain protein TIM barrel - - - 0.0000000000000000000000000000000008433 141.0
DYD3_k127_3239533_2 Cytidine and deoxycytidylate deaminase zinc-binding region K01493 - 3.5.4.12 0.0000000000000000000158 96.0
DYD3_k127_3239533_3 RNA binding K09736 - - 0.000000000000005877 83.0
DYD3_k127_3239533_4 EamA-like transporter family - - - 0.00002726 49.0
DYD3_k127_3260407_0 tRNA-splicing ligase that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs K14415 GO:0000166,GO:0000394,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003972,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0008452,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016886,GO:0017076,GO:0019001,GO:0019002,GO:0030145,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901363 6.5.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007039 541.0
DYD3_k127_3260407_1 ornithine carbamoyltransferase activity K00611 - 2.1.3.3 0.000001979 49.0
DYD3_k127_3260407_2 CarboxypepD_reg-like domain - - - 0.0001122 52.0
DYD3_k127_3260407_3 Carboxypeptidase regulatory-like domain - - - 0.0008963 51.0
DYD3_k127_3289482_0 Alpha-amylase domain K05343 - 3.2.1.1,5.4.99.16 0.0 1345.0
DYD3_k127_3289482_1 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB K16147 - 2.4.99.16 3.16e-255 813.0
DYD3_k127_3289482_2 Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2 K03243 - - 3.766e-198 635.0
DYD3_k127_3289482_3 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000001473 150.0
DYD3_k127_3289482_4 PFAM glycoside hydrolase family 77 K00705 - 2.4.1.25 0.0000000000007273 80.0
DYD3_k127_3298928_0 protein conserved in archaea - - - 0.000000000007364 78.0
DYD3_k127_3323938_0 Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA K03265 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141 423.0
DYD3_k127_3323938_1 Catalytic subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. The small subunit contains the primase catalytic core and has DNA synthesis activity on its own. Binding to the large subunit stabilizes and modulates the activity, increasing the rate of DNA synthesis while decreasing the length of the DNA fragments, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair K02683 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001614 266.0
DYD3_k127_3323938_2 hydrolase activity, acting on ester bonds - - - 0.000000000000000000000000000000000000000000000000000000000000006218 226.0
DYD3_k127_3323938_3 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000000000000000000000000000005636 173.0
DYD3_k127_3323938_4 PFAM NMD3 family K07562 - - 0.000000000000000000000000000000000000001521 161.0
DYD3_k127_3323938_5 Cleaves both 3' and 5' ssDNA extremities of branched DNA structures K07503 - - 0.000000000000000000000000000000000000001894 158.0
DYD3_k127_3323938_6 PAS fold - - - 0.000000000000000000000000000000365 132.0
DYD3_k127_3323938_7 Regulatory subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Stabilizes and modulates the activity of the small subunit, increasing the rate of DNA synthesis, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair K18882 - - 0.00000000000000000000326 96.0
DYD3_k127_3323938_8 phosphoesterase RecJ domain protein K07463 - - 0.0000001174 64.0
DYD3_k127_3328853_0 SnoaL-like domain - - - 0.000000000000000000000000000000006376 130.0
DYD3_k127_3328853_1 Protein of unknown function (DUF4242) - - - 0.00000000000000000000000000003039 121.0
DYD3_k127_3328853_3 X-Pro dipeptidyl-peptidase domain protein K06978 - - 0.000000000000000000000002856 119.0
DYD3_k127_3328853_4 SnoaL-like domain - - - 0.000000000000000000000007245 107.0
DYD3_k127_3328853_5 Protein of unknown function (DUF1697) - - - 0.0000000000009626 76.0
DYD3_k127_3328853_6 Histidine kinase - - - 0.000003145 59.0
DYD3_k127_3342233_0 Glycosyl transferase 4-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000004141 226.0
DYD3_k127_3342233_1 Glycosyltransferase Family 4 K00743 - 2.4.1.87 0.000000000000000000000000000000000003557 152.0
DYD3_k127_3342233_2 mannose-ethanolamine phosphotransferase activity - - - 0.000000000000000000000000002248 126.0
DYD3_k127_3342233_3 transferase activity, transferring glycosyl groups - - - 0.0000000000000003268 91.0
DYD3_k127_3342233_4 Protein involved in outer membrane biogenesis - - - 0.000000000001897 81.0
DYD3_k127_3342233_5 - - - - 0.000000004692 69.0
DYD3_k127_3342233_6 Belongs to the glycosyl hydrolase 5 (cellulase A) family K01179,K19668 GO:0005575,GO:0005576 3.2.1.4,3.2.1.91 0.00003009 57.0
DYD3_k127_3342233_7 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.00006061 55.0
DYD3_k127_3344051_0 toxin activity - - - 0.000002818 60.0
DYD3_k127_3344051_1 PKD domain containing protein - - - 0.00008589 53.0
DYD3_k127_3358178_0 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K12251 - 3.5.1.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002447 410.0
DYD3_k127_3358178_1 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is a component of the KEOPS complex that is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Kae1 likely plays a direct catalytic role in this reaction, but requires other protein(s) of the complex to fulfill this activity K01409 GO:0000049,GO:0000408,GO:0002949,GO:0003674,GO:0003676,GO:0003723,GO:0003727,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001708 389.0
DYD3_k127_3358178_2 Belongs to the agmatine deiminase family K10536 - 3.5.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002094 358.0
DYD3_k127_3358178_3 Alpha/beta hydrolase family K01563 - 3.8.1.5 0.000000000000000000000000000000000000000000000000001868 195.0
DYD3_k127_3358178_4 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is a component of the KEOPS complex that is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. The Kae1 domain likely plays a direct catalytic role in this reaction. The Bud32 domain probably displays kinase activity that regulates Kae1 function K15904 - 2.3.1.234,2.7.11.1 0.0000000000000000000000000000000003848 152.0
DYD3_k127_3358178_5 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000000002787 116.0
DYD3_k127_3358178_6 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.0000000000000000000000002962 117.0
DYD3_k127_3358178_7 TonB dependent receptor - - - 0.0000364 55.0
DYD3_k127_3363212_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 4.122e-206 654.0
DYD3_k127_3363212_1 Glycosyltransferase family 87 - - - 0.00000000000000000000000000000000000000000007402 175.0
DYD3_k127_3363212_2 Nucleotidyltransferase domain - - - 0.00000000005196 74.0
DYD3_k127_3369178_0 PFAM Aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008393 373.0
DYD3_k127_3369178_1 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001783 370.0
DYD3_k127_3369178_2 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 331.0
DYD3_k127_3369178_3 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.00000000000000000000000000000000000000000000000000000003824 205.0
DYD3_k127_3369178_4 - - - - 0.00000000000000001277 84.0
DYD3_k127_3369178_5 protein conserved in archaea - - - 0.000000000000004107 90.0
DYD3_k127_3369178_6 - - - - 0.00000000005452 72.0
DYD3_k127_3369178_7 - - - - 0.0001507 54.0
DYD3_k127_339346_0 DEAD/H associated K03724 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001045 407.0
DYD3_k127_339346_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009403 342.0
DYD3_k127_339346_2 PFAM Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000005084 172.0
DYD3_k127_339346_3 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 - 5.3.1.16 0.00000000000000000000000000000007919 133.0
DYD3_k127_339346_4 EamA-like transporter family - - - 0.000000000000004194 86.0
DYD3_k127_339346_5 Winged helix DNA-binding domain - - - 0.00000000006132 72.0
DYD3_k127_340006_0 Helix-hairpin-helix domain K02347 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001493 443.0
DYD3_k127_340006_1 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000002209 151.0
DYD3_k127_340006_2 exo-alpha-(2->6)-sialidase activity - - - 0.000000000000000000000000000000004977 144.0
DYD3_k127_3401007_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000009855 91.0
DYD3_k127_3401007_1 Transglutaminase-like superfamily - - - 0.0000000006939 69.0
DYD3_k127_3408037_0 Domain of unknown function (DUF305) - - - 0.0000000000003726 80.0
DYD3_k127_3408037_1 CarboxypepD_reg-like domain - - - 0.00003326 56.0
DYD3_k127_3408037_2 CarboxypepD_reg-like domain - - - 0.0006215 51.0
DYD3_k127_3415078_0 Integral membrane protein TerC family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003378 323.0
DYD3_k127_3415078_1 Peptidase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000004613 252.0
DYD3_k127_3415078_10 Histidine kinase - - - 0.0003197 48.0
DYD3_k127_3415078_2 Aldolase/RraA - - - 0.00000000000000000000000000000000000000000000000001085 188.0
DYD3_k127_3415078_3 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000181 166.0
DYD3_k127_3415078_4 Domain of unknown function (DU1801) - - - 0.000000000000000000000000000001995 128.0
DYD3_k127_3415078_5 SWIB/MDM2 domain - - - 0.00000000000000000000002266 101.0
DYD3_k127_3415078_6 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000003353 95.0
DYD3_k127_3415078_7 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000001272 94.0
DYD3_k127_3415078_8 transcriptional regulator PadR family K10947 - - 0.00000000000000001548 86.0
DYD3_k127_3415078_9 Domain of unknown function (DUF4383) - - - 0.000000000004123 74.0
DYD3_k127_343315_0 Thymidylate kinase K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.00000000000000001715 84.0
DYD3_k127_343315_1 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000004418 81.0
DYD3_k127_3443293_0 CopC domain K14166 - - 0.000000000000000000000000154 122.0
DYD3_k127_3443293_1 YtkA-like - - - 0.0002169 53.0
DYD3_k127_347365_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03044,K13798 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007264 430.0
DYD3_k127_347365_1 General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation K03120 - - 0.0000000000000000000000000000000000000000000000000000000000000000000026 243.0
DYD3_k127_347365_2 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.0000000000000000000000000000000000000000000002414 188.0
DYD3_k127_347365_3 PFAM aminotransferase - - - 0.0000000000000000000000000000000000006215 155.0
DYD3_k127_347365_4 NUDIX domain - - - 0.0000000000000000000000000000001311 129.0
DYD3_k127_347365_5 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03053 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.00000000000000000008584 91.0
DYD3_k127_347365_6 - - - - 0.0004688 46.0
DYD3_k127_3494251_0 PhoQ Sensor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007128 518.0
DYD3_k127_3494251_1 COG0665 Glycine D-amino acid oxidases (deaminating) K00303 - 1.5.3.1 0.0000000000000000000000000000000000009523 148.0
DYD3_k127_3494251_2 Rhodanese Homology Domain - - - 0.000000000000001286 81.0
DYD3_k127_3494251_3 LVIVD repeat - - - 0.0009002 51.0
DYD3_k127_3518949_0 Zinc carboxypeptidase - - - 0.00000000000000000000000000000000002548 156.0
DYD3_k127_3518949_1 exosome subunit K07581 - - 0.00000001183 63.0
DYD3_k127_3518949_2 TonB-dependent receptor plug K02014 - - 0.0001465 53.0
DYD3_k127_3528174_0 Mut7-C RNAse domain K09122 - - 0.000000000000000000000000000005988 125.0
DYD3_k127_3528174_1 - - - - 0.000000000000003341 83.0
DYD3_k127_3528174_2 Reeler domain - - - 0.000000006351 66.0
DYD3_k127_3528174_3 TonB dependent receptor - - - 0.0001102 55.0
DYD3_k127_3528786_0 TIGRFAM phenazine biosynthesis protein PhzF family - - - 0.00000000000000000000000000000000000000000000000000000000000001258 225.0
DYD3_k127_3528786_1 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000007058 220.0
DYD3_k127_3528786_2 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.000000000000000003572 90.0
DYD3_k127_3528786_3 DNA binding protein - - - 0.0005698 51.0
DYD3_k127_3528789_0 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004145 471.0
DYD3_k127_3528789_1 TIGRFAM argininosuccinate lyase K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007778 403.0
DYD3_k127_3528789_2 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000001194 279.0
DYD3_k127_3528789_3 Transcriptional regulator - - - 0.00000000000552 74.0
DYD3_k127_3528789_4 Fibronectin type III domain - - - 0.000000002821 70.0
DYD3_k127_3531703_0 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006564 401.0
DYD3_k127_3531703_1 PFAM Nitroreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000004179 231.0
DYD3_k127_3531703_2 Protein of unknown function (DUF1684) K09164 - - 0.000000000000000000000000000000000000002912 154.0
DYD3_k127_3542586_0 TIGRFAM Ammonium transporter K03320 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000138 469.0
DYD3_k127_3542586_1 MoeA N-terminal region (domain I and II) K03750,K07219 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003127 292.0
DYD3_k127_3542586_2 May be involved in the biosynthesis of molybdopterin K03638 - 2.7.7.75 0.000000000000000000000001819 106.0
DYD3_k127_3542586_3 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000008375 62.0
DYD3_k127_3542586_4 cobalamin-transporting ATPase activity - - - 0.00001459 56.0
DYD3_k127_3542586_5 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.00008558 54.0
DYD3_k127_354381_0 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000001593 246.0
DYD3_k127_354381_1 - K00960 - 2.7.7.6 0.00000000004885 65.0
DYD3_k127_3544171_0 Glyceraldehyde-3-phosphate dehydrogenase K00150 - 1.2.1.59 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 389.0
DYD3_k127_3544171_1 ATPase activity K01990,K19340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006316 337.0
DYD3_k127_3544171_2 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003189 309.0
DYD3_k127_3544171_3 SAICAR synthetase K01923 - 6.3.2.6 0.0000000000000000000000000000000000000000000000000319 182.0
DYD3_k127_3544171_4 beta-N-acetylhexosaminidase activity K04618 - 1.1.3.9 0.00000000000000000000000000163 129.0
DYD3_k127_3544171_5 protein contain chitin-binding domain type 3 K01183,K21606 - 3.2.1.14,3.2.1.202 0.0000000000000000000000002756 122.0
DYD3_k127_3544171_6 ABC-type transport system involved in multi-copper enzyme maturation permease component K01992 - - 0.0000000000004805 80.0
DYD3_k127_3544171_7 Membrane-bound metal-dependent hydrolase - - - 0.0000000001611 69.0
DYD3_k127_3544171_8 ABC-2 family transporter protein K01992 - - 0.00006627 54.0
DYD3_k127_3545375_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 342.0
DYD3_k127_3546324_0 DNA-dependent ATPase and 3'-5' DNA helicase that may be involved in repair of stalled replication forks K03726 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 604.0
DYD3_k127_3546324_2 KEOPS complex Cgi121-like subunit K09119 - - 0.00001191 54.0
DYD3_k127_357387_0 phosphoesterase RecJ domain protein K07463 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 314.0
DYD3_k127_3585206_0 Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules K04483 GO:0000150,GO:0000217,GO:0000400,GO:0000724,GO:0000725,GO:0000730,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003697,GO:0003824,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006312,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009314,GO:0009628,GO:0009987,GO:0010212,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022607,GO:0033554,GO:0034622,GO:0034641,GO:0042148,GO:0042623,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0045003,GO:0046483,GO:0050896,GO:0051716,GO:0065003,GO:0065004,GO:0071704,GO:0071824,GO:0071840,GO:0090304,GO:0090735,GO:0097159,GO:0140097,GO:1901360,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001561 413.0
DYD3_k127_3585206_1 Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules K04483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004729 324.0
DYD3_k127_3585244_0 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase K07575 GO:0001731,GO:0002181,GO:0002183,GO:0002188,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000005785 172.0
DYD3_k127_3585244_1 ZPR1-related zinc finger protein K06874 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000003027 167.0
DYD3_k127_3585244_2 Pfam:DUF552 K09152 - - 0.000000000000000000001014 100.0
DYD3_k127_3585244_3 Alpha beta K06889 - - 0.000000539 59.0
DYD3_k127_3591356_0 Fibronectin-binding protein A N-terminus (FbpA) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001405 324.0
DYD3_k127_3591356_1 TrkA-C domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002803 307.0
DYD3_k127_3591356_2 Quinolinate phosphoribosyl transferase, C-terminal domain K00767 - 2.4.2.19 0.0000000000000000000000000000000000000000000000001558 191.0
DYD3_k127_3591356_3 ribosomal small subunit binding - - - 0.0002586 53.0
DYD3_k127_3617745_0 succinate dehydrogenase K00239 GO:0000104,GO:0000166,GO:0001539,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006091,GO:0006113,GO:0006928,GO:0006950,GO:0006974,GO:0006996,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016043,GO:0016491,GO:0016627,GO:0022607,GO:0022900,GO:0030030,GO:0030031,GO:0032991,GO:0033554,GO:0036094,GO:0040011,GO:0043167,GO:0043168,GO:0044085,GO:0044237,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0044780,GO:0044781,GO:0045273,GO:0045274,GO:0045283,GO:0045284,GO:0045333,GO:0048037,GO:0048870,GO:0050660,GO:0050662,GO:0050896,GO:0051179,GO:0051674,GO:0051716,GO:0055114,GO:0070469,GO:0070470,GO:0070925,GO:0071840,GO:0071944,GO:0071949,GO:0071973,GO:0097159,GO:0097588,GO:0098796,GO:0098797,GO:0098803,GO:1901265,GO:1901363 1.3.5.1,1.3.5.4 7.336e-234 743.0
DYD3_k127_3617745_1 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003154 295.0
DYD3_k127_3617745_2 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000134 282.0
DYD3_k127_3617745_3 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00240 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000002004 150.0
DYD3_k127_3663256_0 DHH family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000375 414.0
DYD3_k127_3663256_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006128 295.0
DYD3_k127_3663256_2 Toxic component of a toxin-antitoxin (TA) module. An RNase K18828 - - 0.000000000000004408 80.0
DYD3_k127_3663256_3 Pfam:DUF217 - - - 0.000000001872 62.0
DYD3_k127_3663256_4 PFAM peptidase M50 - - - 0.0003777 48.0
DYD3_k127_3681849_0 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000000000000000000001207 254.0
DYD3_k127_3681849_1 Pyridoxamine 5'-phosphate oxidase K07006 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009249 255.0
DYD3_k127_3681849_2 DNA alkylation repair enzyme - - - 0.000000000000000000000000000000000000000000000000000000000001855 222.0
DYD3_k127_3681849_3 Signal transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000234 220.0
DYD3_k127_3681849_4 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000005065 216.0
DYD3_k127_3681849_5 nitric oxide dioxygenase activity K21405 - - 0.00000000000000000000000000000000000000000001227 174.0
DYD3_k127_3681849_6 Galactose oxidase, central domain - - - 0.000000000000000000000000000004661 132.0
DYD3_k127_3681849_7 Response regulator receiver - - - 0.00000002131 62.0
DYD3_k127_3681849_8 translation release factor activity - - - 0.00003617 53.0
DYD3_k127_3705872_0 membrane transporter protein K07090 - - 0.000000000000000000000000002103 121.0
DYD3_k127_3705872_1 KaiC - - - 0.0000000000000000001349 97.0
DYD3_k127_3705872_2 - - - - 0.00001885 53.0
DYD3_k127_3705872_3 RibD C-terminal domain K14654 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006139,GO:0006725,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009451,GO:0009987,GO:0016070,GO:0016491,GO:0016614,GO:0016616,GO:0017144,GO:0018130,GO:0034641,GO:0036094,GO:0042364,GO:0042726,GO:0042727,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0046983,GO:0048037,GO:0050661,GO:0050662,GO:0051287,GO:0055114,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.1.1.302 0.00006371 46.0
DYD3_k127_3707860_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1111.0
DYD3_k127_3707860_1 snoRNA binding domain, fibrillarin K14564 GO:0000154,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0030515,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000003066 215.0
DYD3_k127_3707860_2 Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA K04795 - - 0.000000000000000000000000000000000000000000000000000003091 198.0
DYD3_k127_3707860_3 Catalyzes the conversion of dihydroorotate to orotate K00254,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.5.2 0.0000000000000000000000000000000000001428 145.0
DYD3_k127_3707860_4 Thiamine-binding protein - - - 0.0000000000000002151 82.0
DYD3_k127_3707860_5 protein conserved in archaea - - - 0.0000000000242 72.0
DYD3_k127_3707860_6 cell wall anchor domain - - - 0.00006316 54.0
DYD3_k127_3715287_0 Transcriptional regulator, ArsR family - - - 0.00005146 53.0
DYD3_k127_3715287_1 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00009075 51.0
DYD3_k127_3727369_0 Belongs to the peptidase S8 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005143 287.0
DYD3_k127_3727369_1 THUMP K03151 - 2.8.1.4 0.0000000000000000000000000000000000000000000001815 175.0
DYD3_k127_3734293_0 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000001112 247.0
DYD3_k127_3734293_1 Belongs to the peptidase S16 family K06870 - - 0.00000000000000000000000000000000000000000000000000000000000108 235.0
DYD3_k127_3734293_2 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000003275 196.0
DYD3_k127_3734293_3 Zinc carboxypeptidase - - - 0.000000000000000000000000000000007065 148.0
DYD3_k127_3734293_4 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.000000000000000000000003817 109.0
DYD3_k127_3734293_5 - - - - 0.00001053 55.0
DYD3_k127_3754098_0 HicA toxin of bacterial toxin-antitoxin, - - - 0.0000000000000152 75.0
DYD3_k127_3754098_1 HicB_like antitoxin of bacterial toxin-antitoxin system - - - 0.000003689 56.0
DYD3_k127_3754098_2 CarboxypepD_reg-like domain - - - 0.00001554 57.0
DYD3_k127_3754098_3 HicB_like antitoxin of bacterial toxin-antitoxin system - - - 0.00001934 53.0
DYD3_k127_3788055_0 PFAM Sulfite exporter TauE SafE K07090 - - 0.0000000000000000000000000000000000000000000000000000005535 201.0
DYD3_k127_3788055_1 protein conserved in archaea - - - 0.00000000000000000408 88.0
DYD3_k127_3788055_2 TfoX N-terminal domain - - - 0.00000000000148 73.0
DYD3_k127_3831892_0 pfam abc1 K03688 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004294 295.0
DYD3_k127_3831892_1 Protein of unknown function (DUF1614) - - - 0.00000000000005215 84.0
DYD3_k127_3831892_2 membrane protein domain - - - 0.00000000002033 76.0
DYD3_k127_3833814_0 PFAM peptidase U62 modulator of DNA gyrase K03568 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001796 378.0
DYD3_k127_3833814_1 PFAM peptidase U62 modulator of DNA gyrase K03592 - - 0.0000000000000000000000000000000000000000000000000000000000221 228.0
DYD3_k127_3833814_2 Putative exonuclease SbcCD, C subunit K03546 - - 0.0000000000000000000000000000000000004045 160.0
DYD3_k127_3833814_3 methyltransferase - - - 0.00000000000000000000000000000000000578 153.0
DYD3_k127_3833814_4 Glycosyltransferase family 87 - - - 0.00000000000004963 87.0
DYD3_k127_3833814_5 sh3 domain protein - - - 0.000006723 60.0
DYD3_k127_3833814_6 Glycosyltransferase WbsX - - - 0.0001054 56.0
DYD3_k127_3847011_0 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 3.919e-237 744.0
DYD3_k127_3847011_1 Repeats in polycystic kidney disease 1 (PKD1) and other proteins K01179 - 3.2.1.4 0.000006719 57.0
DYD3_k127_393829_0 Domain of unknown function (DUF1611_N) Rossmann-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002778 269.0
DYD3_k127_393829_1 Mandelate racemase muconate lactonizing enzyme K19802 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016854,GO:0034641,GO:0043167,GO:0043169,GO:0043603,GO:0044237,GO:0046872,GO:0071704,GO:1901564 5.1.1.20 0.000000000000000000000000000000000002869 152.0
DYD3_k127_393829_2 LVIVD repeat - - - 0.00000001969 67.0
DYD3_k127_393829_3 exo-alpha-(2->6)-sialidase activity - - - 0.00003243 57.0
DYD3_k127_393829_4 TonB-dependent receptor K02014,K16089 - - 0.000525 51.0
DYD3_k127_3939831_0 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003002 314.0
DYD3_k127_3939831_1 Periplasmic binding protein LacI transcriptional regulator K02529 - - 0.0000000000000000000000000000000000004657 143.0
DYD3_k127_3939831_2 PFAM Glucose Sorbosone dehydrogenase - - - 0.00000005197 55.0
DYD3_k127_3950636_0 PFAM type II secretion system protein E K07332 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006431 510.0
DYD3_k127_3950636_1 Type II secretion system (T2SS), protein F K07333 - - 0.00000000000000000000000000000000000000000000002124 182.0
DYD3_k127_3950636_2 Type II secretion system (T2SS), protein F K07333 - - 0.000000000000000000000000000000000000000545 171.0
DYD3_k127_3950636_3 MMPL family K07003 - - 0.0001491 54.0
DYD3_k127_3950833_0 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.0000000000000000000000000000000000000000000000000000361 197.0
DYD3_k127_3950833_1 COG0491 Zn-dependent hydrolases, including glyoxylases K01069 - 3.1.2.6 0.0000000000000000000000000000000000000000000000000004354 192.0
DYD3_k127_3950833_2 abc-type fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.00000000000000000000000000000000000000001758 168.0
DYD3_k127_3950833_3 PFAM phosphoesterase, RecJ domain protein K07463 - - 0.000000000000000000000000001504 128.0
DYD3_k127_3950833_4 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 GO:0003674,GO:0003824,GO:0003906,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008081,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0033554,GO:0034641,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 3.1.21.2 0.00000000000000000006798 91.0
DYD3_k127_3956110_0 Binds the lower part of the 30S subunit head K02982 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003565 249.0
DYD3_k127_3956110_1 Belongs to the eukaryotic ribosomal protein eS4 family K02987 - - 0.0000000000000000000000000000000000000000000000000000007252 200.0
DYD3_k127_3956110_10 Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends K03538 - 3.1.26.5 0.0000002179 58.0
DYD3_k127_3956110_2 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000000000003464 186.0
DYD3_k127_3956110_3 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.0000000000000000000000000000000000000000000003603 170.0
DYD3_k127_3956110_4 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.00000000000000000000000000000000000001026 149.0
DYD3_k127_3956110_5 Belongs to the SUI1 family K03113 - - 0.00000000000000000000000000000000000003245 146.0
DYD3_k127_3956110_6 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000001379 149.0
DYD3_k127_3956110_7 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.000000000000000000000000000000001096 134.0
DYD3_k127_3956110_8 Located at the polypeptide exit tunnel on the outside of the subunit K02895 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000009735 117.0
DYD3_k127_3956110_9 Ribosomal L29 protein K02904 - - 0.00000000000002347 80.0
DYD3_k127_3964177_0 Transport of potassium into the cell K03549 - - 1.993e-212 678.0
DYD3_k127_3964177_1 PFAM oxidoreductase, molybdopterin binding - - - 0.00000000000000000000000002198 122.0
DYD3_k127_3964177_2 MOSC domain - - - 0.00000000000000000000008987 105.0
DYD3_k127_3964177_3 LVIVD repeat - - - 0.000000000000000000000145 108.0
DYD3_k127_3964177_4 PFAM Cupin 2 conserved barrel domain protein - - - 0.0000000000000000006076 93.0
DYD3_k127_3964177_5 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.000000000000000832 80.0
DYD3_k127_3968181_0 Asp-tRNAAsn Glu-tRNAGln amidotransferase A subunit K01426,K21801 - 3.5.1.4 0.000000000000000000000000000000002873 141.0
DYD3_k127_3968181_1 repeat protein - - - 0.000000000000000000000001389 112.0
DYD3_k127_3968181_2 cheY-homologous receiver domain - - - 0.00000000000000002458 87.0
DYD3_k127_3968181_3 protein conserved in archaea - - - 0.000000009471 64.0
DYD3_k127_3968181_4 BNR repeat-like domain - - - 0.0003125 53.0
DYD3_k127_4000230_0 Belongs to the thiolase family K00626,K00632 - 2.3.1.16,2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 436.0
DYD3_k127_4000230_1 acyl-CoA dehydrogenase K00248,K00249 - 1.3.8.1,1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000219 363.0
DYD3_k127_4000230_10 - - - - 0.000000000000000000000000000001534 138.0
DYD3_k127_4000230_11 Belongs to the eukaryotic ribosomal protein eL18 family K02883 - - 0.00000000000000000000000000003354 122.0
DYD3_k127_4000230_12 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.0000000000000000000000000006789 122.0
DYD3_k127_4000230_13 - - - - 0.00000000000000000000000001983 113.0
DYD3_k127_4000230_14 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.000000000000000000003553 104.0
DYD3_k127_4000230_15 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03058 GO:0000428,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0008270,GO:0030880,GO:0032991,GO:0043167,GO:0043169,GO:0044424,GO:0044464,GO:0046872,GO:0046914,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.00000000000000002505 86.0
DYD3_k127_4000230_16 DNA recombination K09760 - - 0.00000000000003924 84.0
DYD3_k127_4000230_17 Pyruvate phosphate dikinase - - - 0.0000000000006809 78.0
DYD3_k127_4000230_18 Transcriptional regulator - - - 0.0000000000007849 75.0
DYD3_k127_4000230_19 PFAM SNARE associated Golgi protein - - - 0.00000000002229 73.0
DYD3_k127_4000230_2 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 295.0
DYD3_k127_4000230_20 Acetyl-CoA acetyltransferase K00626,K00632 - 2.3.1.16,2.3.1.9 0.000000009479 62.0
DYD3_k127_4000230_21 TIGRFAM TonB-dependent siderophore receptor K02014 - - 0.000001626 59.0
DYD3_k127_4000230_22 TonB-dependent receptor - - - 0.0003077 52.0
DYD3_k127_4000230_3 May function in recognizing stalled ribosomes, interact with stem-loop structures in stalled mRNA molecules, and effect endonucleolytic cleavage of the mRNA. May play a role in the release non-functional ribosomes and degradation of damaged mRNAs. Has endoribonuclease activity K06965 GO:0000956,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006401,GO:0006402,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0016075,GO:0019222,GO:0019439,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0034655,GO:0034660,GO:0034661,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0070651,GO:0070966,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:1901360,GO:1901361,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1903008 - 0.00000000000000000000000000000000000000000000000000000000000000002605 237.0
DYD3_k127_4000230_4 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.0000000000000000000000000000000000000000000003609 169.0
DYD3_k127_4000230_5 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000001304 173.0
DYD3_k127_4000230_6 - - - - 0.000000000000000000000000000000000000002138 159.0
DYD3_k127_4000230_7 Protein of unknown function, DUF488 - - - 0.00000000000000000000000000000000000002613 158.0
DYD3_k127_4000230_8 Methyltransferase type 11 - - - 0.0000000000000000000000000000000007373 139.0
DYD3_k127_4011723_0 Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA K04801 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004232 419.0
DYD3_k127_4011723_1 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase K01439 - 3.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000584 415.0
DYD3_k127_4011723_2 Could be responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs K06176 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0016070,GO:0016853,GO:0016866,GO:0034641,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002052 294.0
DYD3_k127_4011723_3 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.00000000000000000000000000000000000000000000000008722 203.0
DYD3_k127_4011723_4 Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase K07559 - - 0.000000000000000000000009413 104.0
DYD3_k127_4011723_5 - - - - 0.0000000000000000004781 96.0
DYD3_k127_4011723_6 guanyl-nucleotide exchange factor activity - - - 0.0003818 52.0
DYD3_k127_4022980_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 5.337e-246 779.0
DYD3_k127_4022980_1 SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 K03049 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.00000000000000000000000000000000000000000000000000000001294 204.0
DYD3_k127_4022980_2 Belongs to the UPF0218 family K09735 - - 0.0000000000000000000000000004287 120.0
DYD3_k127_4022980_3 Ankyrin repeat - - - 0.000000000000000000000000002268 128.0
DYD3_k127_4022980_4 Belongs to the universal ribosomal protein uS2 family K02967 GO:0000028,GO:0000447,GO:0000460,GO:0000461,GO:0000462,GO:0000466,GO:0000469,GO:0000478,GO:0000479,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0031123,GO:0031125,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043628,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000003989 75.0
DYD3_k127_4022980_5 Transcription elongation factor Spt4 K03050 - 2.7.7.6 0.000000006614 59.0
DYD3_k127_4024483_0 Subtilase family K08651 - 3.4.21.66 0.000000000000000000000000000000000000000000000000000003685 205.0
DYD3_k127_4024483_1 phosphorelay signal transduction system K07714 - - 0.0000000000000002845 88.0
DYD3_k127_4024483_2 Glutamine amidotransferases class-II - - - 0.000000000000003248 87.0
DYD3_k127_4024483_3 Predicted integral membrane protein (DUF2269) - - - 0.0000003883 62.0
DYD3_k127_4027570_0 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.000000000000002563 89.0
DYD3_k127_4027570_1 Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2- acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway K16148 - 2.4.1.342 0.000000000001737 74.0
DYD3_k127_4032281_0 cystathionine gamma-synthase K01739,K01758,K01760 - 2.5.1.48,4.4.1.1,4.4.1.8 0.000000000000000000000000000003389 123.0
DYD3_k127_4049177_0 Peptidase family M48 K03799 - - 0.00000000000000000000000000000000000000000000000000000000001037 218.0
DYD3_k127_4049177_1 PFAM LemA K03744 - - 0.0000000000000000000000000000000000000000000000000000000001799 208.0
DYD3_k127_4049177_2 - - - - 0.00000000000000000000000000000000003135 144.0
DYD3_k127_4049177_3 Haloacid dehalogenase-like hydrolase K01838 - 5.4.2.6 0.000000000000001702 84.0
DYD3_k127_4049719_0 Serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000002137 174.0
DYD3_k127_4049719_1 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.000000000000000000001374 106.0
DYD3_k127_4049719_2 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.0000003275 61.0
DYD3_k127_4049719_3 GAF domain - - - 0.000008277 56.0
DYD3_k127_4062146_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006645 319.0
DYD3_k127_4062146_1 Mediates influx of magnesium ions K03284 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004003 289.0
DYD3_k127_4062146_2 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000006932 237.0
DYD3_k127_4062146_3 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K01281 - 3.4.14.11 0.000000000000000000000000000000000004606 156.0
DYD3_k127_4062146_4 PAS PAC sensor signal transduction histidine kinase K18350 - 2.7.13.3 0.0000000000000000000005407 100.0
DYD3_k127_4062146_5 phosphorelay signal transduction system - - - 0.0000000000002423 76.0
DYD3_k127_4062146_6 phosphorelay signal transduction system K03413 - - 0.000000000001185 80.0
DYD3_k127_4062146_7 Bacterio-opsin activator HTH domain protein - - - 0.00000003724 63.0
DYD3_k127_4062146_8 PFAM regulatory protein LuxR - - - 0.00001962 51.0
DYD3_k127_4077604_0 Aldo keto - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 320.0
DYD3_k127_4077604_1 PAS fold - - - 0.0000000000000000000000000000000000000007637 170.0
DYD3_k127_4077604_2 TrkA-N domain K03499 - - 0.000000000000000000000000000000000000003544 156.0
DYD3_k127_4077604_3 metallopeptidase activity - - - 0.00000000000000000000000000003178 127.0
DYD3_k127_4077604_4 helix_turn_helix ASNC type - - - 0.00000000000000273 84.0
DYD3_k127_4077604_5 Winged helix-turn-helix DNA-binding - - - 0.0000000000128 77.0
DYD3_k127_4077604_6 phosphorelay sensor kinase activity K03406,K07675,K17763,K21009 - 2.7.13.3 0.00000006547 64.0
DYD3_k127_4077604_7 - K07039,K09858 - - 0.000005458 52.0
DYD3_k127_4077604_8 protein conserved in archaea - - - 0.0004224 52.0
DYD3_k127_4084449_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03041 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 1168.0
DYD3_k127_4084449_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03044,K13798 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 4.488e-250 784.0
DYD3_k127_4084449_2 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03042 - 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001983 402.0
DYD3_k127_4084449_3 Multicopper oxidase - - - 0.00000000000000000000000000000000000000000000000000004201 205.0
DYD3_k127_4084449_4 Participates in transcription termination K02600 - - 0.0000000000000000000000002578 115.0
DYD3_k127_4084449_5 PFAM ribosomal protein L7Ae L30e S12e Gadd45 K02908 - - 0.0000000000000000000000006699 106.0
DYD3_k127_4084449_6 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K13798 - 2.7.7.6 0.0000000003064 61.0
DYD3_k127_4084449_7 PFAM transposase, IS4 family protein - - - 0.0001282 46.0
DYD3_k127_4100406_0 Belongs to the malate synthase family K01638 - 2.3.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005537 541.0
DYD3_k127_4100406_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003084 490.0
DYD3_k127_4100406_10 High-affinity nickel-transport protein K07241 - - 0.00000000000000000129 94.0
DYD3_k127_4100406_11 Transcriptional regulator, ArsR family - - - 0.00000000000001391 88.0
DYD3_k127_4100406_12 TIGRFAM lysine biosynthesis protein LysW K05826 - - 0.00000000000001648 81.0
DYD3_k127_4100406_13 ACT domain protein - - - 0.00000000000005347 77.0
DYD3_k127_4100406_14 Fe-S oxidoreductase - - - 0.0000000001279 63.0
DYD3_k127_4100406_15 - K00176,K07138 - 1.2.7.3 0.00000009578 55.0
DYD3_k127_4100406_2 Fe-S oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002242 482.0
DYD3_k127_4100406_3 Catalyzes the NADPH-dependent reduction of LysW - aminoadipate 6-phosphate to yield LysW -aminoadipate 6- semialdehyde K05829 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000377 396.0
DYD3_k127_4100406_4 homocitrate synthase activity K01649 - 2.3.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006373 340.0
DYD3_k127_4100406_5 PFAM ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp K05827 - 6.3.2.43 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001561 327.0
DYD3_k127_4100406_6 Belongs to the acetylglutamate kinase family. LysZ subfamily K05828 - - 0.000000000000000000000000000000000000000000000000000000000000000000003261 244.0
DYD3_k127_4100406_7 COG1522 Transcriptional regulators - - - 0.0000000000000000000000000000001179 130.0
DYD3_k127_4100406_8 Thioredoxin K03671 - - 0.00000000000000000000000009353 111.0
DYD3_k127_4100406_9 COG0346 Lactoylglutathione lyase and related lyases K01759 - 4.4.1.5 0.0000000000000000008844 92.0
DYD3_k127_4106810_0 Possesses two activities a DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3'- to 5'-direction. Has a template-primer preference which is characteristic of a replicative DNA polymerase K02322 GO:0003674,GO:0005488,GO:0005515,GO:0042802 2.7.7.7 0.0 1070.0
DYD3_k127_4106810_1 Domain of unknown function (DUF1611_N) Rossmann-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 305.0
DYD3_k127_4106810_2 Potassium uptake protein, TrkH family K03498 - - 0.000000000000000000000000000000000000000000000000000000434 202.0
DYD3_k127_4106810_3 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000126 210.0
DYD3_k127_4106810_4 COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily K19802 - 5.1.1.20 0.00000000000000000000000000000000000000000000000001078 196.0
DYD3_k127_4106810_5 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.000000000000000000000001206 106.0
DYD3_k127_4106810_6 C-terminal four TMM region of protein-O-mannosyltransferase K00728 - 2.4.1.109 0.0000000000000000000008421 110.0
DYD3_k127_4106810_7 - - - - 0.0000000000000005187 82.0
DYD3_k127_4106810_8 TonB dependent receptor K02014,K16087 - - 0.0008973 51.0
DYD3_k127_4110376_0 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005668 520.0
DYD3_k127_4110376_1 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000002023 172.0
DYD3_k127_4110376_2 guanyl-nucleotide exchange factor activity - - - 0.00000158 58.0
DYD3_k127_4110376_3 ParE toxin of type II toxin-antitoxin system, parDE K06218 - - 0.000003562 53.0
DYD3_k127_4120959_0 acr, cog1565 - - - 0.00000000000000000000000000000000000000000003913 174.0
DYD3_k127_4120959_1 regulator of amino acid metabolism, contains ACT domain K07103 - - 0.0000000000000000000000000002593 117.0
DYD3_k127_4120959_2 DNA-binding transcription factor activity - - - 0.00008419 48.0
DYD3_k127_4127952_0 Histidine kinase K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 314.0
DYD3_k127_4127952_1 PFAM FKBP-type peptidyl-prolyl cis-trans isomerase K01802 - 5.2.1.8 0.0000000000000000000000000000000000000000001872 164.0
DYD3_k127_4127952_2 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0000000000000000000000009432 120.0
DYD3_k127_4127952_3 PAC2 family K06869 - - 0.00000000000000001565 93.0
DYD3_k127_4127952_4 polysaccharide biosynthetic process - - - 0.00000000000000007535 94.0
DYD3_k127_4127952_5 cheY-homologous receiver domain - - - 0.000000000000006489 83.0
DYD3_k127_4127952_6 AsnC-type helix-turn-helix domain - - - 0.00000000007384 72.0
DYD3_k127_4127952_7 protein conserved in archaea - - - 0.0000004425 61.0
DYD3_k127_4127952_8 DNA binding protein - - - 0.000002738 58.0
DYD3_k127_4143900_0 Highly conserved protein containing a thioredoxin domain K06888 - - 0.0000000000000000000000000000000000000000000000000000000000000000001399 250.0
DYD3_k127_4143900_1 TIGRFAM 3-oxoacyl-(acyl-carrier-protein) reductase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000006216 221.0
DYD3_k127_4143900_2 Uncharacterized conserved protein (DUF2203) - - - 0.000000000000000000009287 100.0
DYD3_k127_4154011_0 InterPro IPR014922 - - - 0.00000000000000000000000000000000000000000000000000000000001332 212.0
DYD3_k127_4154011_1 RibD C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000001432 195.0
DYD3_k127_4154011_2 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000002728 150.0
DYD3_k127_4154011_3 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000003396 117.0
DYD3_k127_4154011_4 glyoxalase III activity - - - 0.000000000000000000000000006204 116.0
DYD3_k127_4154011_5 cheY-homologous receiver domain - - - 0.0000003688 59.0
DYD3_k127_4154011_6 - - - - 0.00003242 49.0
DYD3_k127_4191424_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 377.0
DYD3_k127_4191424_1 Belongs to the aspartate-semialdehyde dehydrogenase family K00133 - 1.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003309 372.0
DYD3_k127_4191424_10 PFAM Indole-3-glycerol phosphate synthase K01609 - 4.1.1.48 0.0000000000000000000000000000000000000367 153.0
DYD3_k127_4191424_11 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K13832 - 1.1.1.25,4.2.1.10 0.000000000000000000000000000000006769 145.0
DYD3_k127_4191424_12 shikimate kinase activity K00891 - 2.7.1.71 0.00000000000000000000000000002269 134.0
DYD3_k127_4191424_13 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 0.00000000000000001309 85.0
DYD3_k127_4191424_14 - - - - 0.00002466 51.0
DYD3_k127_4191424_15 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 GO:0000162,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.20 0.00048 51.0
DYD3_k127_4191424_2 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001306 322.0
DYD3_k127_4191424_3 Belongs to the aspartokinase family K00928 GO:0003674,GO:0003824,GO:0004072,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006553,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0019202,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046451,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 314.0
DYD3_k127_4191424_4 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006722 308.0
DYD3_k127_4191424_5 Catalyzes the oxidative deamination and cyclization of 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonic acid (ADH) to yield 3- dehydroquinate (DHQ), which is fed into the canonical shikimic pathway of aromatic amino acid biosynthesis K11646 - 1.4.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003795 286.0
DYD3_k127_4191424_6 Catalyzes a transaldol reaction between 6-deoxy-5- ketofructose 1-phosphate (DKFP) and L-aspartate semialdehyde (ASA) with an elimination of hydroxypyruvaldehyde phosphate to yield 2- amino-3,7-dideoxy-D-threo-hept-6-ulosonate (ADH). Plays a key role in an alternative pathway of the biosynthesis of 3-dehydroquinate (DHQ), which is involved in the canonical pathway for the biosynthesis of aromatic amino acids K11645,K16306 - 2.2.1.10,4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000701 261.0
DYD3_k127_4191424_7 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18 0.00000000000000000000000000000000000000000000000000000000000000000000012 246.0
DYD3_k127_4191424_8 Prephenate dehydrogenase chorismate mutase K00210 - 1.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000004275 246.0
DYD3_k127_4191424_9 synthase K01658 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000004342 226.0
DYD3_k127_4193647_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009944 282.0
DYD3_k127_4193647_1 - - - - 0.000000000000000000000000000000000004874 155.0
DYD3_k127_4193647_2 hemerythrin HHE cation binding domain - - - 0.0000004505 62.0
DYD3_k127_4193647_3 exo-alpha-(2->6)-sialidase activity - - - 0.0001383 55.0
DYD3_k127_4197024_0 TIGRFAM methylmalonyl-CoA mutase, large subunit K01848 - 5.4.99.2 3.967e-221 699.0
DYD3_k127_4197024_1 - - - - 0.00000000001446 74.0
DYD3_k127_4226698_0 Belongs to the ribulose-phosphate 3-epimerase family K01783 GO:0003674,GO:0003824,GO:0004750,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009052,GO:0009056,GO:0009117,GO:0009987,GO:0016052,GO:0016853,GO:0016854,GO:0016857,GO:0019321,GO:0019323,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046483,GO:0046496,GO:0046872,GO:0051156,GO:0051186,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564,GO:1901575 5.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001429 280.0
DYD3_k127_4226698_1 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K02858 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0008686,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016829,GO:0016830,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.12 0.00000000000000000000000000000000000000000000000000000009785 204.0
DYD3_k127_4226698_2 Catalyzes the transfer of the AMP portion of ATP to flavin mononucleotide (FMN) to produce flavin adenine dinucleotide (FAD) coenzyme K14656 GO:0000166,GO:0001882,GO:0001884,GO:0002135,GO:0003674,GO:0003824,GO:0003919,GO:0005488,GO:0005515,GO:0005524,GO:0006139,GO:0006725,GO:0006732,GO:0006747,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009161,GO:0009165,GO:0009259,GO:0009987,GO:0010181,GO:0016740,GO:0016772,GO:0016779,GO:0017076,GO:0018130,GO:0019103,GO:0019438,GO:0019637,GO:0019693,GO:0030554,GO:0032549,GO:0032551,GO:0032553,GO:0032555,GO:0032557,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042726,GO:0042727,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046443,GO:0046444,GO:0046483,GO:0046983,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072387,GO:0072388,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.7.2 0.0000000000000000000000000000000000000000000009957 170.0
DYD3_k127_4226698_3 Belongs to the eukaryotic ribosomal protein eS17 family K02962 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.000000000005518 72.0
DYD3_k127_4226698_4 Pkd domain containing protein - - - 0.0001136 52.0
DYD3_k127_4248835_0 Regulatory subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Stabilizes and modulates the activity of the small subunit, increasing the rate of DNA synthesis, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair K18882 - - 0.000000000000008188 83.0
DYD3_k127_4248835_1 Domain of unknown function (DUF4332) - - - 0.0005362 51.0
DYD3_k127_4257695_0 PFAM Aldehyde dehydrogenase K22187 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 408.0
DYD3_k127_4257695_1 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.0000000000000000000000000000000000000001269 157.0
DYD3_k127_4257695_2 transcriptional regulators - - - 0.00000000000000000000000004831 112.0
DYD3_k127_4257695_3 - - - - 0.0001028 47.0
DYD3_k127_4263987_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit K02118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 405.0
DYD3_k127_4263987_1 Produces ATP from ADP in the presence of a proton gradient across the membrane K02120 - - 0.0000000000000000000000000000000000000000000000000000000000000000006103 235.0
DYD3_k127_4281539_0 D-isomer specific 2-hydroxyacid dehydrogenase catalytic K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000004287 158.0
DYD3_k127_4290308_0 XdhC Rossmann domain K07402 - - 0.000000000000000000000000000000000000006971 157.0
DYD3_k127_4290308_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000003366 101.0
DYD3_k127_4313044_0 Belongs to the class-II aminoacyl-tRNA synthetase family K01868 - 6.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000001358 231.0
DYD3_k127_4313044_1 PFAM Aminotransferase class I and II K10907,K14287 - 2.6.1.88 0.00000000000000000000000000000000000000000000000000000000000002352 220.0
DYD3_k127_4313044_3 exo-alpha-(2->6)-sialidase activity - - - 0.0000000000000000000002591 111.0
DYD3_k127_4339642_0 Citrate synthase, C-terminal domain K01647 - 2.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 388.0
DYD3_k127_4339642_1 D-isomer specific 2-hydroxyacid dehydrogenase K00015,K00090 - 1.1.1.215,1.1.1.26,1.1.1.79,1.1.1.81 0.00000000000000000000000000000000000000000000000000000000000000000000000000001406 272.0
DYD3_k127_4339642_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000434 231.0
DYD3_k127_4339642_3 Cytochrome c - - - 0.0000000000000000000000000001238 123.0
DYD3_k127_4339642_4 - - - - 0.00000000000000000000001484 116.0
DYD3_k127_4339642_5 Archaeal Peptidase A24 C-terminus Type II K07991 - 3.4.23.52 0.00000000000000000000162 104.0
DYD3_k127_4339642_6 Pro-kumamolisin, activation domain - - - 0.00000002282 65.0
DYD3_k127_4356439_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 5.524e-216 690.0
DYD3_k127_4356439_1 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.000000000000000000000001765 117.0
DYD3_k127_4366723_0 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 GO:0003674,GO:0005215,GO:0005216,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015075,GO:0015267,GO:0015318,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022838,GO:0022857,GO:0030104,GO:0031224,GO:0031226,GO:0032535,GO:0034220,GO:0042592,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0090066 - 0.000000000000000000000000000000000000000000000003933 179.0
DYD3_k127_4366723_1 dipeptidyl-peptidase K01281 - 3.4.14.11 0.0000000000000000000000000000000000001429 160.0
DYD3_k127_4391894_0 Possible Fer4-like domain in RNase L inhibitor, RLI K06174 - - 2.73e-225 712.0
DYD3_k127_4391894_1 Belongs to the phosphoglycerate kinase family K00927,K01803 - 2.7.2.3,5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003461 476.0
DYD3_k127_4391894_2 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.000000000000000000000000000000001083 134.0
DYD3_k127_4392063_0 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003002 551.0
DYD3_k127_4392063_1 Arsenical pump membrane protein - - - 0.000000000000000000000000000000000000000000000000000000000000006889 232.0
DYD3_k127_4392063_2 phosphoserine phosphatase - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000008265 105.0
DYD3_k127_4392063_3 PFAM amidohydrolase - - - 0.000000000000000007109 91.0
DYD3_k127_4401622_0 TIGRFAM acetyl-CoA carboxylase, biotin carboxylase K01959 - 6.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005881 509.0
DYD3_k127_4401622_1 Biotin-requiring enzyme K01960 - 6.4.1.1 0.00000000000002158 83.0
DYD3_k127_4401622_2 BioY family K03523 - - 0.000000000005926 77.0
DYD3_k127_4401622_3 synthase K00997,K06133 - 2.7.8.7 0.000000000006722 76.0
DYD3_k127_4420174_0 Pkd domain containing protein - - - 0.00000000007439 75.0
DYD3_k127_4420174_1 Esterase PHB depolymerase - - - 0.0000001191 64.0
DYD3_k127_4425816_0 AAA-like domain K06915 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006235 417.0
DYD3_k127_4425816_1 S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF- 2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis K20215 GO:0003674,GO:0003824,GO:0004164,GO:0006417,GO:0006448,GO:0006464,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0009056,GO:0009058,GO:0009109,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0010608,GO:0016740,GO:0016741,GO:0017144,GO:0017182,GO:0017183,GO:0018193,GO:0018202,GO:0019222,GO:0019538,GO:0031323,GO:0031326,GO:0032259,GO:0032268,GO:0034248,GO:0036211,GO:0042737,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044273,GO:0046500,GO:0050789,GO:0050794,GO:0050843,GO:0051171,GO:0051186,GO:0051187,GO:0051246,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:1900247,GO:1901564,GO:1901575,GO:2000112,GO:2000765 2.1.1.98 0.000000000000000000000000000000000000000000000000000000000000000002631 235.0
DYD3_k127_4425816_2 Met-10+ like-protein K15429 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.000000000000000000000000000000001805 136.0
DYD3_k127_4425816_3 Protein of unknown function (DUF357) K09728 - - 0.0000000000000000000000000005915 117.0
DYD3_k127_4425816_4 malic protein domain protein K00029 - 1.1.1.40 0.00000001942 56.0
DYD3_k127_4430765_0 Amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002958 289.0
DYD3_k127_4430765_1 PFAM Glycosyl transferase family 2 K00721 - 2.4.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000004233 253.0
DYD3_k127_4430765_10 Winged helix-turn-helix - - - 0.000000005044 61.0
DYD3_k127_4430765_11 Sugar-specific transcriptional regulator TrmB - - - 0.0000009021 60.0
DYD3_k127_4430765_12 Winged helix-turn-helix DNA-binding - - - 0.000004721 57.0
DYD3_k127_4430765_13 CarboxypepD_reg-like domain - - - 0.000321 51.0
DYD3_k127_4430765_2 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.00000000000000000000000000000000000000000000000000000000001417 218.0
DYD3_k127_4430765_3 Dimethylates a single guanine residue at position 26 of a number of tRNAs using S-adenosyl-L-methionine as donor of the methyl groups K00555 GO:0001510,GO:0002940,GO:0003674,GO:0003824,GO:0004809,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.215,2.1.1.216 0.00000000000000000000000000000000000000000000000000000000002526 223.0
DYD3_k127_4430765_4 Has nucleotide phosphatase activity towards ATP, GTP, CTP, TTP and UTP. May hydrolyze nucleoside diphosphates with lower efficiency K06928 - 3.6.1.15 0.00000000000000000000000000000000000000000000000000000001298 203.0
DYD3_k127_4430765_5 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 GO:0000027,GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008650,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0016436,GO:0016740,GO:0016741,GO:0022607,GO:0022613,GO:0022618,GO:0031167,GO:0032259,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042273,GO:0043170,GO:0043412,GO:0043414,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.166 0.0000000000000000000000000000000000000000000000000301 194.0
DYD3_k127_4430765_6 phosphatidylserine decarboxylase K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000002354 168.0
DYD3_k127_4430765_7 Glycosyl transferase K00728 - 2.4.1.109 0.00000000000000000000000000001161 137.0
DYD3_k127_4430765_8 PFAM Transmembrane exosortase (Exosortase_EpsH) - - - 0.000000000000000005505 97.0
DYD3_k127_4430765_9 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000001976 85.0
DYD3_k127_4442297_0 Has ATPase and non-specific DNA-binding activities K07456 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006135 317.0
DYD3_k127_4442297_1 glycosyl hydrolase, BNR repeat-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001197 297.0
DYD3_k127_4442297_4 helix_turn_helix ASNC type - - - 0.000000006702 67.0
DYD3_k127_4442297_5 Thioredoxin domain - - - 0.0002458 47.0
DYD3_k127_4442297_6 Copper binding proteins, plastocyanin/azurin family - - - 0.0002693 50.0
DYD3_k127_44488_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003844 429.0
DYD3_k127_44488_1 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K01281 - 3.4.14.11 0.0001658 50.0
DYD3_k127_44568_0 GHKL domain - - - 0.0000000000000000000000000000000000005629 161.0
DYD3_k127_44568_1 Transcriptional regulatory protein, C terminal K07667 - - 0.00000007173 63.0
DYD3_k127_4478217_0 Short-chain dehydrogenase reductase SDR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002606 328.0
DYD3_k127_4478217_1 transferase activity, transferring acyl groups other than amino-acyl groups - - - 0.000000000000000000000004556 115.0
DYD3_k127_4478217_2 Protein of unknown function (DUF2723) - - - 0.00000000000000000002553 106.0
DYD3_k127_4478217_3 Transcriptional regulator - - - 0.00000000000000153 87.0
DYD3_k127_4479079_0 RNA-3'-phosphate cyclase activity K01974 GO:0003674,GO:0003824,GO:0003963,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009975,GO:0016874,GO:0016886,GO:0044424,GO:0044464,GO:0140098 6.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003829 312.0
DYD3_k127_4479079_1 Carboxypeptidase E K01292,K01294,K07752 GO:0001505,GO:0001956,GO:0003007,GO:0003205,GO:0003206,GO:0003208,GO:0003214,GO:0003231,GO:0003674,GO:0003824,GO:0004180,GO:0004181,GO:0004185,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005886,GO:0006464,GO:0006508,GO:0006518,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006836,GO:0006937,GO:0007154,GO:0007165,GO:0007166,GO:0007186,GO:0007218,GO:0007267,GO:0007268,GO:0007269,GO:0007271,GO:0007275,GO:0007507,GO:0007610,GO:0007631,GO:0008104,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008236,GO:0008237,GO:0008238,GO:0008582,GO:0009056,GO:0009653,GO:0009887,GO:0009914,GO:0009987,GO:0010033,GO:0010035,GO:0010037,GO:0010467,GO:0010646,GO:0010647,GO:0010817,GO:0012505,GO:0012506,GO:0014055,GO:0014056,GO:0014057,GO:0015695,GO:0015696,GO:0015870,GO:0015893,GO:0016020,GO:0016055,GO:0016485,GO:0016486,GO:0016787,GO:0017171,GO:0019538,GO:0019904,GO:0022603,GO:0023051,GO:0023052,GO:0023056,GO:0023061,GO:0030070,GO:0030141,GO:0030424,GO:0030425,GO:0030536,GO:0030537,GO:0030659,GO:0030667,GO:0031045,GO:0031090,GO:0031410,GO:0031982,GO:0032222,GO:0032224,GO:0032501,GO:0032502,GO:0032879,GO:0032940,GO:0033036,GO:0034230,GO:0034613,GO:0034641,GO:0035690,GO:0036211,GO:0036477,GO:0040008,GO:0040012,GO:0040017,GO:0042043,GO:0042221,GO:0042445,GO:0042493,GO:0042995,GO:0043005,GO:0043025,GO:0043051,GO:0043167,GO:0043169,GO:0043170,GO:0043171,GO:0043204,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043269,GO:0043270,GO:0043412,GO:0043603,GO:0044057,GO:0044058,GO:0044062,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044267,GO:0044297,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044444,GO:0044446,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045121,GO:0045202,GO:0045887,GO:0045927,GO:0046872,GO:0046879,GO:0046883,GO:0046887,GO:0046903,GO:0046914,GO:0046928,GO:0048513,GO:0048518,GO:0048519,GO:0048520,GO:0048521,GO:0048522,GO:0048583,GO:0048584,GO:0048638,GO:0048639,GO:0048731,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0050795,GO:0050803,GO:0050804,GO:0050806,GO:0050807,GO:0050839,GO:0050896,GO:0050897,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051093,GO:0051094,GO:0051128,GO:0051130,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051241,GO:0051588,GO:0051590,GO:0051604,GO:0051641,GO:0051649,GO:0051716,GO:0051952,GO:0051954,GO:0051960,GO:0051961,GO:0051962,GO:0051963,GO:0051965,GO:0060259,GO:0060341,GO:0060456,GO:0060688,GO:0061526,GO:0061837,GO:0065007,GO:0065008,GO:0070008,GO:0070011,GO:0070727,GO:0070887,GO:0071241,GO:0071244,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0072347,GO:0072359,GO:0072657,GO:0090257,GO:0090325,GO:0090326,GO:0097060,GO:0097447,GO:0097458,GO:0097708,GO:0098588,GO:0098589,GO:0098590,GO:0098805,GO:0098857,GO:0098916,GO:0099177,GO:0099503,GO:0099536,GO:0099537,GO:0099643,GO:0120025,GO:0120038,GO:0140096,GO:0198738,GO:1901142,GO:1901374,GO:1901564,GO:1901565,GO:1901575,GO:1901700,GO:1901701,GO:1903530,GO:1903532,GO:1903745,GO:1903998,GO:1903999,GO:1904396,GO:1904398,GO:1905114,GO:2000026,GO:2000172,GO:2000173,GO:2000252,GO:2000292,GO:2000294,GO:2001023,GO:2001025 3.4.17.10,3.4.17.22,3.4.17.3 0.000001325 59.0
DYD3_k127_4534021_0 Methylmalonyl-CoA mutase K01847,K01848 - 5.4.99.2 1.369e-202 639.0
DYD3_k127_4534021_1 tRNA synthetases class I (W and Y) K01867 GO:0003674,GO:0003824,GO:0004812,GO:0004830,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006436,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002753 461.0
DYD3_k127_4534021_2 SdrD B-like domain - - - 0.0002513 52.0
DYD3_k127_4550302_0 ABC transporter K01990,K09695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001914 416.0
DYD3_k127_4550302_1 transport, permease protein K01992,K18233 - - 0.000000002142 59.0
DYD3_k127_4550302_2 domain protein K14475 - - 0.0002005 53.0
DYD3_k127_4556629_0 Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P). This reaction is the first ether-bond-formation step in the biosynthesis of archaeal membrane lipids K17104 GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 2.5.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000003989 254.0
DYD3_k127_4556629_1 COG3407 Mevalonate pyrophosphate decarboxylase K17942 - 4.1.1.99 0.000000000000000000000000000000000000000000000000000000000000002422 231.0
DYD3_k127_4556629_2 Belongs to the FPP GGPP synthase family K13787 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000364 175.0
DYD3_k127_4556629_3 Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesis of archaeal membrane lipids K17105 - 2.5.1.42 0.00000000000000000000000000000009859 135.0
DYD3_k127_4598861_0 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000001739 134.0
DYD3_k127_4598861_1 VIT family - - - 0.00000000000000000000004798 109.0
DYD3_k127_4598861_2 LVIVD repeat - - - 0.00000001906 67.0
DYD3_k127_4598861_3 LVIVD repeat-containing protein - - - 0.00009574 55.0
DYD3_k127_4638178_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 4.433e-253 804.0
DYD3_k127_4638178_1 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008476 307.0
DYD3_k127_4638178_2 tRNA intron endonuclease, catalytic C-terminal domain K01170 GO:0000213,GO:0000379,GO:0000394,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0004549,GO:0006139,GO:0006388,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016892,GO:0016894,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:0140101,GO:1901360 4.6.1.16 0.0000000000000000000000000000000000000000000000000000000003567 215.0
DYD3_k127_4638178_3 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000002227 83.0
DYD3_k127_4657317_0 Isocitrate isopropylmalate dehydrogenase K00052 - 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003379 364.0
DYD3_k127_4664570_0 Phosphatidylethanolamine-binding protein K06910 - - 0.000000000000000000000000000000000000000000001147 169.0
DYD3_k127_4664570_1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.00000006841 63.0
DYD3_k127_4664570_2 LVIVD repeat - - - 0.000008814 58.0
DYD3_k127_4670572_0 COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes K00382 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007917 450.0
DYD3_k127_4670572_1 MFS/sugar transport protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003438 258.0
DYD3_k127_4670572_2 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.000000000000000000000000000000000000000000001385 179.0
DYD3_k127_4670572_3 PFAM phospholipid glycerol acyltransferase - - - 0.000000000000000000000000000000000000003847 151.0
DYD3_k127_4670572_4 COG0723 Rieske Fe-S protein - - - 0.00000001832 64.0
DYD3_k127_4670572_5 TonB-dependent receptor plug domain protein - - - 0.000007447 57.0
DYD3_k127_4699320_0 3-hydroxyacyl-CoA dehydrogenase K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000001114 229.0
DYD3_k127_4699320_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.000000000000000000003398 97.0
DYD3_k127_4699320_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000001528 64.0
DYD3_k127_4699320_3 exo-alpha-(2->6)-sialidase activity - - - 0.0007278 51.0
DYD3_k127_4725182_0 PFAM tRNA synthetase, class II (D, K and N) K01893 - 6.1.1.22 0.000000000000000000000000000000000000000000000000000000000000006321 220.0
DYD3_k127_4725182_1 Carbon-nitrogen hydrolase - - - 0.0000000000000000000000000000001761 132.0
DYD3_k127_4725182_2 PIN domain - - - 0.000000000008733 70.0
DYD3_k127_4725182_3 Ectodermal ciliogenesis protein - - - 0.0000001922 56.0
DYD3_k127_4725182_4 - - - - 0.000006897 51.0
DYD3_k127_4741475_0 DEAD DEAH box helicase domain protein K05592,K11927 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008977 342.0
DYD3_k127_4741475_1 glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000000000003577 139.0
DYD3_k127_4741475_2 Fatty acid desaturase - - - 0.00000000000000000000006356 100.0
DYD3_k127_4741475_3 HD domain - - - 0.00000000000000000000008102 105.0
DYD3_k127_4741475_4 Protein of unknown function (DUF1761) - - - 0.0002575 49.0
DYD3_k127_4755856_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001885 432.0
DYD3_k127_4755856_1 Transcriptional regulator K07731 - - 0.000002322 53.0
DYD3_k127_4755856_2 CDP-alcohol phosphatidyltransferase - - - 0.00002049 55.0
DYD3_k127_4755856_3 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.0001227 51.0
DYD3_k127_4784028_0 Protein of unknown function (DUF3494) - - - 0.0000000000000000000000000000000000000000000000000000000007164 211.0
DYD3_k127_4784028_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000004366 191.0
DYD3_k127_4784028_2 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000008561 132.0
DYD3_k127_4784028_3 PFAM response regulator receiver - - - 0.00000000000000001323 90.0
DYD3_k127_4784028_4 Two component, sigma54 specific, transcriptional regulator, Fis family K07715 - - 0.0000000000002419 78.0
DYD3_k127_4784028_5 Histidine kinase - - - 0.0000000007721 68.0
DYD3_k127_4784028_6 COG1520 FOG WD40-like repeat - - - 0.00000009706 64.0
DYD3_k127_4784028_7 Protein of unknown function (DUF2934) - - - 0.0000007924 55.0
DYD3_k127_4784028_8 - - - - 0.000003464 56.0
DYD3_k127_4784028_9 Bacterio-opsin activator HTH domain protein - - - 0.00002069 51.0
DYD3_k127_4784517_0 PFAM FAD linked oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004287 292.0
DYD3_k127_4784517_1 DHH family - - - 0.00000000000000000000000000000000000000000000008095 183.0
DYD3_k127_4784517_2 metallopeptidase activity - - - 0.0000000000002161 79.0
DYD3_k127_4845504_0 His Kinase A (phosphoacceptor) domain K13924 - 2.1.1.80,3.1.1.61 0.00000000000000000000000000000000000000000000000000000000008215 231.0
DYD3_k127_4845504_1 Integral membrane sensor signal transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000001767 185.0
DYD3_k127_4845504_2 - - - - 0.000000000000000000005242 108.0
DYD3_k127_4845504_3 Domain of unknown function (DUF4382) - - - 0.00000000000001263 83.0
DYD3_k127_4845504_4 CAAX protease self-immunity K07052 - - 0.00000000003119 73.0
DYD3_k127_4848034_0 Cell division protein 48, CDC48, domain 2 K13525 - - 4.693e-291 914.0
DYD3_k127_4848034_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002656 357.0
DYD3_k127_4848034_10 peroxiredoxin activity - - - 0.00000000000000000000000000000000000000000000000005713 188.0
DYD3_k127_4848034_11 Archaeal holliday junction resolvase (hjc) - - - 0.000000000000000000000000000000000000000000000001994 181.0
DYD3_k127_4848034_12 COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily - - - 0.0000000000000000000000000000000000000000000004334 171.0
DYD3_k127_4848034_13 Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.000000000000000000000000000000000000000007133 162.0
DYD3_k127_4848034_14 Kelch motif - - - 0.000000000000000000000000000001569 138.0
DYD3_k127_4848034_15 DNA polymerase III, epsilon subunit K02342 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0016020,GO:0030312,GO:0032991,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0071944,GO:1902494,GO:1905347,GO:1905348,GO:1990391 2.7.7.7 0.00000000000000000000000000002103 126.0
DYD3_k127_4848034_16 ACT domain protein - - - 0.00000000000002506 79.0
DYD3_k127_4848034_17 Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats - - - 0.000000000001581 80.0
DYD3_k127_4848034_18 PFAM peptidase U32 K08303 - - 0.00000000002683 67.0
DYD3_k127_4848034_19 NfeD-like C-terminal, partner-binding K07403 - - 0.0000000008562 66.0
DYD3_k127_4848034_2 Zn-dependent hydrolases of the beta-lactamase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001357 282.0
DYD3_k127_4848034_20 Transposase IS4 family protein K07495 - - 0.000000001458 69.0
DYD3_k127_4848034_21 - - - - 0.00000002113 64.0
DYD3_k127_4848034_22 Antibiotic biosynthesis monooxygenase - - - 0.000004529 52.0
DYD3_k127_4848034_3 Protein of unknown function (DUF1015) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005049 265.0
DYD3_k127_4848034_4 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000004746 235.0
DYD3_k127_4848034_5 Aminotransferase class-V - - - 0.000000000000000000000000000000000000000000000000000000000001849 225.0
DYD3_k127_4848034_6 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000003347 201.0
DYD3_k127_4848034_7 PFAM ABC-2 type transporter K01992 - - 0.0000000000000000000000000000000000000000000000000000001505 208.0
DYD3_k127_4848034_8 Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS K08681 - 4.3.3.6 0.000000000000000000000000000000000000000000000000004655 188.0
DYD3_k127_4848034_9 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.00000000000000000000000000000000000000000000000002196 187.0
DYD3_k127_4860470_0 Universal stress protein - - - 0.0000000000000007486 90.0
DYD3_k127_4860470_2 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.00001333 57.0
DYD3_k127_4881273_0 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K03231 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002248 612.0
DYD3_k127_4881273_1 Involved in the binding of tRNA to the ribosomes K02946 - - 0.00000000000000000000000000000000000000000000002514 171.0
DYD3_k127_4881273_2 Major facilitator Superfamily K01256,K16210 - 3.4.11.2 0.0000000000000989 82.0
DYD3_k127_4881273_3 domain protein - - - 0.0003753 52.0
DYD3_k127_4885788_0 - - - - 0.0005646 53.0
DYD3_k127_4891904_0 TIGRFAM histone acetyltransferase, ELP3 family K07739 - 2.3.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002826 466.0
DYD3_k127_4891904_1 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0001871,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0008150,GO:0009986,GO:0017076,GO:0030234,GO:0030246,GO:0030247,GO:0030554,GO:0036094,GO:0044464,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363,GO:2001065 - 0.000000000000000000000003784 109.0
DYD3_k127_4891904_2 MMPL family K07003 - - 0.000006307 58.0
DYD3_k127_4892831_0 Structure-specific nuclease with 5'-flap endonuclease and 5'-3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double- stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. Acts as a genome stabilization factor that prevents flaps from equilibrating into structurs that lead to duplications and deletions. Also possesses 5'-3' exonuclease activity on nicked or gapped double-stranded DNA K04799 - - 0.0000000000000000000000000000000000000001266 158.0
DYD3_k127_4892831_1 metal-dependent phosphoesterases (PHP family) - - - 0.00000000000000000000000000003029 130.0
DYD3_k127_4892831_2 exo-alpha-(2->6)-sialidase activity - - - 0.00000000000000000000000001214 125.0
DYD3_k127_4892831_3 helix_turn_helix, Lux Regulon - - - 0.00000000004471 68.0
DYD3_k127_4892831_4 Winged helix DNA-binding domain - - - 0.000000003532 62.0
DYD3_k127_4892831_5 - - - - 0.000007097 54.0
DYD3_k127_4892831_6 (Hpt) domain K20976 - - 0.00003641 51.0
DYD3_k127_4943825_0 and related - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002616 311.0
DYD3_k127_4943825_1 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis K13010 - 2.6.1.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 298.0
DYD3_k127_4943825_2 COG0110 Acetyltransferase (isoleucine patch superfamily) - - - 0.0000000000000000000000000000000002519 133.0
DYD3_k127_4956688_0 Xylose isomerase-like TIM barrel K01151 - 3.1.21.2 0.000000000000000000000000000000000000000000000000000000000000000000001463 244.0
DYD3_k127_4956688_1 Multicopper oxidase - - - 0.000000000000000000000000000000000000009899 162.0
DYD3_k127_4963193_0 Amidase K01426 - 3.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002441 315.0
DYD3_k127_4963193_1 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source K01916 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.1.5 0.000000000000000000000000000000000000000000005088 168.0
DYD3_k127_4963193_2 phosphoribosyl-ATP pyrophosphohydrolase - - - 0.00000006015 63.0
DYD3_k127_4963410_0 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000002927 85.0
DYD3_k127_4963410_1 DNA binding protein - - - 0.0008772 51.0
DYD3_k127_4971709_0 PFAM Kelch - - - 0.000000000000000000000001766 119.0
DYD3_k127_4971709_1 LVIVD repeat - - - 0.0000000000000000000004371 110.0
DYD3_k127_4971709_2 LVIVD repeat - - - 0.0000000000000006047 91.0
DYD3_k127_4971709_3 LVIVD repeat - - - 0.00000005173 65.0
DYD3_k127_4971709_4 - - - - 0.0000001042 64.0
DYD3_k127_4971709_5 CarboxypepD_reg-like domain - - - 0.0009232 51.0
DYD3_k127_497874_0 PAS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002825 337.0
DYD3_k127_497874_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006866 263.0
DYD3_k127_497874_2 HWE histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000003271 232.0
DYD3_k127_497874_3 MASE1 - - - 0.00000000000000000000002959 106.0
DYD3_k127_497874_4 helix_turn_helix, Lux Regulon K07693 - - 0.0000000000000000182 87.0
DYD3_k127_497874_5 COG5608 Conserved secreted protein - - - 0.000007937 57.0
DYD3_k127_497874_6 COG5608 Conserved secreted protein - - - 0.00009168 54.0
DYD3_k127_4992477_0 Flavin containing amine oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000002037 231.0
DYD3_k127_4992477_1 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.00000000000000000000000000000000008246 153.0
DYD3_k127_5007315_0 Belongs to the peptidase S16 family K04076 - 3.4.21.53 1.52e-249 788.0
DYD3_k127_5007315_1 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000007586 224.0
DYD3_k127_5007315_2 Lipoate-protein ligase K03800 GO:0003674,GO:0003824,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016415,GO:0016740,GO:0016746,GO:0016747,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 6.3.1.20 0.0000000000000000000000000000000005408 139.0
DYD3_k127_5007315_3 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000731 122.0
DYD3_k127_5007315_4 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 - - 0.000000000000001014 81.0
DYD3_k127_5007315_5 Sigma-54 interaction domain K03405 - 6.6.1.1 0.000000000000008462 87.0
DYD3_k127_5007315_6 Histidine Phosphotransfer domain - - - 0.0000001167 64.0
DYD3_k127_5007315_7 SpoVT / AbrB like domain - - - 0.0003834 46.0
DYD3_k127_5012514_0 eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA K03242 - - 0.0000000000000000000000000000000000000000000000000000000000000003669 222.0
DYD3_k127_5012514_1 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.0001347 52.0
DYD3_k127_5012514_2 TonB dependent receptor K02014 - - 0.0007513 51.0
DYD3_k127_5016021_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005255 275.0
DYD3_k127_5016021_1 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 0.000000000000000000000000000000000000000000000000000000622 198.0
DYD3_k127_5016021_2 Thioesterase-like superfamily K07107 - - 0.0000000000000000000002018 102.0
DYD3_k127_5016021_3 Pfam:DUF1628 - - - 0.0000000000001322 84.0
DYD3_k127_5016021_4 small multi-drug export - - - 0.0007702 51.0
DYD3_k127_5037957_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K03234 - - 5.609e-305 950.0
DYD3_k127_5037957_1 With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits K02950 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000003557 229.0
DYD3_k127_5037957_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000001741 233.0
DYD3_k127_5037957_3 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.00000001544 65.0
DYD3_k127_504764_0 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005521 297.0
DYD3_k127_504764_1 YjgF/chorismate_mutase-like, putative endoribonuclease - - - 0.00000000000000000000000000000000000000000005312 166.0
DYD3_k127_504764_2 Electron transfer flavoprotein K03521 - - 0.00000000000000000000000009171 113.0
DYD3_k127_504764_3 Uncharacterised protein family (UPF0147) K09721 - - 0.00000000000000000000008142 102.0
DYD3_k127_504764_4 PFAM nitrogen-fixing NifU domain protein - - - 0.00000000000000000002025 93.0
DYD3_k127_504764_5 PFAM Archease protein family (DUF101 UPF0211) - - - 0.000000000000001014 83.0
DYD3_k127_504764_6 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.0000000003092 62.0
DYD3_k127_504764_7 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.000000001142 70.0
DYD3_k127_504764_8 TIGRFAM TonB-dependent outer membrane receptor, SusC RagA subfamily, signature region K21573 - - 0.0000003542 61.0
DYD3_k127_504764_9 peptidase - - - 0.00005093 55.0
DYD3_k127_5048451_0 Catalytic component of the exosome, which is a complex involved in RNA degradation. Has 3'- 5' exoribonuclease activity. Can also synthesize heteropolymeric RNA-tails K11600 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004682 300.0
DYD3_k127_5048451_1 Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Contributes to the structuring of the Rrp41 active site K12589 GO:0000177,GO:0000178,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016072,GO:0016075,GO:0017091,GO:0019439,GO:0032991,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1902494,GO:1905354 - 0.00000000000000000000000000000000000000000000000000000000000000000000000008164 268.0
DYD3_k127_5048451_2 Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Confers strong poly(A) specificity to the exosome K03679 GO:0000178,GO:0000288,GO:0000291,GO:0000459,GO:0000460,GO:0000466,GO:0000467,GO:0000469,GO:0000956,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016072,GO:0016073,GO:0016074,GO:0016180,GO:0019222,GO:0019439,GO:0022613,GO:0031123,GO:0031125,GO:0031126,GO:0032991,GO:0034470,GO:0034472,GO:0034475,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0042254,GO:0043144,GO:0043170,GO:0043628,GO:0043928,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071034,GO:0071043,GO:0071051,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1902494,GO:1905354 - 0.00000000000000000000000000000000000000000000000000000000000000000213 237.0
DYD3_k127_5048451_3 ribosomal protein K02921 - - 0.000000000000000000000000004543 114.0
DYD3_k127_5048451_4 Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding K04798 - - 0.00000000000000002528 89.0
DYD3_k127_5048451_5 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03059 - 2.7.7.6 0.00000000000001669 73.0
DYD3_k127_5075456_0 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000001186 95.0
DYD3_k127_5075456_1 Hemerythrin - - - 0.0000000000000009171 85.0
DYD3_k127_5075456_2 Protein of unknown function (DUF3309) - - - 0.000000000000004266 77.0
DYD3_k127_5075456_3 Ferredoxin - - - 0.00000000000001871 77.0
DYD3_k127_5075456_4 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.00000002623 64.0
DYD3_k127_5075456_5 Protein of unknown function (DUF2934) - - - 0.000164 49.0
DYD3_k127_5081719_0 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005649 318.0
DYD3_k127_5081719_1 DNA binding protein - - - 0.0000000000000000000000008896 114.0
DYD3_k127_5081719_2 Carboxypeptidase regulatory-like domain - - - 0.000149 53.0
DYD3_k127_5098788_0 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002337 386.0
DYD3_k127_5098788_1 One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome K02930 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000009825 215.0
DYD3_k127_5098788_2 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.0000000000000006654 79.0
DYD3_k127_5098788_3 Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome K02892 - - 0.0000000000001462 78.0
DYD3_k127_5133318_0 PFAM phosphate transporter K03306 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003107 344.0
DYD3_k127_5133318_1 TIGRFAM phosphate ABC transporter K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005661 257.0
DYD3_k127_5133318_10 Belongs to the ribosomal protein L31e family K02910 - - 0.0000000000000000005013 95.0
DYD3_k127_5133318_11 LVIVD repeat - - - 0.000000000000002649 89.0
DYD3_k127_5133318_12 Protein of unknown function (DUF1405) - - - 0.0000000001686 70.0
DYD3_k127_5133318_13 Alpha beta hydrolase fold - - - 0.0000000005462 70.0
DYD3_k127_5133318_14 Protein of unknown function (DUF983) - - - 0.000000003033 66.0
DYD3_k127_5133318_15 Belongs to the eukaryotic ribosomal protein eL39 family K02924 - - 0.00000001198 63.0
DYD3_k127_5133318_16 PA domain - - - 0.00000003556 66.0
DYD3_k127_5133318_17 CRS1_YhbY K07574 - - 0.000009455 53.0
DYD3_k127_5133318_2 Phosphate transport regulator K07220 - - 0.000000000000000000000000000000000000000000000000000005006 196.0
DYD3_k127_5133318_3 Binds to the 50S ribosomal subunit and prevents its association with the 30S ribosomal subunit to form the 70S initiation complex K03264 - - 0.000000000000000000000000000000000000000000000257 181.0
DYD3_k127_5133318_4 May be involved in maturation of the 30S ribosomal subunit K02966 - - 0.0000000000000000000000000000000000000000000004654 171.0
DYD3_k127_5133318_5 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000002079 144.0
DYD3_k127_5133318_6 PFAM transferase hexapeptide repeat containing protein - - - 0.00000000000000000000000000000000122 149.0
DYD3_k127_5133318_7 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000005656 127.0
DYD3_k127_5133318_8 Belongs to the PDCD5 family K06875 - - 0.0000000000000000000002908 100.0
DYD3_k127_5133318_9 Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends K03540 - 3.1.26.5 0.0000000000000000000676 93.0
DYD3_k127_5160970_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007063 417.0
DYD3_k127_5160970_1 PFAM SPFH domain Band 7 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008677 314.0
DYD3_k127_5160970_2 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000002913 173.0
DYD3_k127_5160970_3 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.00000000000000000000000000000000000003944 151.0
DYD3_k127_5160970_4 Predicted membrane protein (DUF2339) - - - 0.00000000000000000000000000000004867 143.0
DYD3_k127_5160970_5 TOPRIM - - - 0.000000000000000001135 92.0
DYD3_k127_5160970_6 Belongs to the UPF0235 family K09131 - - 0.00000000000003721 83.0
DYD3_k127_5160970_7 Winged helix-turn-helix DNA-binding - - - 0.0000000000004589 83.0
DYD3_k127_5160970_8 Serine threonine protein phosphatase K20074 GO:0000287,GO:0001932,GO:0001933,GO:0003674,GO:0003824,GO:0004647,GO:0004721,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0006464,GO:0006469,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009892,GO:0009987,GO:0010563,GO:0010605,GO:0016020,GO:0016021,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019220,GO:0019222,GO:0019538,GO:0030145,GO:0030312,GO:0031224,GO:0031226,GO:0031323,GO:0031324,GO:0031399,GO:0031400,GO:0032268,GO:0032269,GO:0033673,GO:0036211,GO:0042325,GO:0042326,GO:0042578,GO:0043085,GO:0043086,GO:0043167,GO:0043169,GO:0043170,GO:0043392,GO:0043412,GO:0043549,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0045859,GO:0045936,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051098,GO:0051100,GO:0051101,GO:0051171,GO:0051172,GO:0051174,GO:0051246,GO:0051248,GO:0051338,GO:0051348,GO:0060255,GO:0065007,GO:0065009,GO:0071704,GO:0071944,GO:0080090,GO:0140096,GO:1901564 3.1.3.16 0.000003938 55.0
DYD3_k127_5160970_9 Peptidyl-prolyl cis-trans K01802,K03772 - 5.2.1.8 0.0007525 51.0
DYD3_k127_5194359_0 Thioesterase superfamily - - - 0.0000000000005166 82.0
DYD3_k127_5194359_1 exo-alpha-(2->6)-sialidase activity - - - 0.0000212 57.0
DYD3_k127_5207469_0 DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000096 542.0
DYD3_k127_5207469_1 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002712 316.0
DYD3_k127_5207469_2 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001907 319.0
DYD3_k127_5207469_3 Histone deacetylase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000001386 242.0
DYD3_k127_5207469_4 Dehydrogenase K00248 - 1.3.8.1 0.00000000000000000000000000000000000000000000000000000000001522 218.0
DYD3_k127_5207469_5 PAC2 family K06869 - - 0.00000000000000000000000000000000000000000000000000000003281 205.0
DYD3_k127_5207469_6 Ribosomal protein L11 methyltransferase (PrmA) K07579 - - 0.000000000000000000000000000000000000000005976 169.0
DYD3_k127_5207469_7 PFAM GHMP kinase K06982 - 2.7.1.169 0.00000000000000000000000000000000005248 153.0
DYD3_k127_5210406_0 PQQ-dependent polyvinyl alcohol dehydrogenase - - - 0.00000000000000000000000000000000001965 154.0
DYD3_k127_5210406_1 acid phosphatase activity K22390 - - 0.0000000000002951 83.0
DYD3_k127_5210406_2 Copper binding proteins, plastocyanin/azurin family - - - 0.00000005745 66.0
DYD3_k127_5210406_3 glucose sorbosone K00117 - 1.1.5.2 0.0000003196 57.0
DYD3_k127_5210406_4 Belongs to the glycosyl hydrolase 5 (cellulase A) family K01179 - 3.2.1.4 0.0005911 49.0
DYD3_k127_5213976_0 PAC2 family K07159 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002455 262.0
DYD3_k127_5213976_1 eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA K03237 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000008703 135.0
DYD3_k127_5213976_2 TIGRFAM phage SPO1 DNA polymerase-related protein K21929 GO:0003674,GO:0003824,GO:0004844,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0048037,GO:0050896,GO:0051536,GO:0051539,GO:0051540,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0140097,GO:1901360 3.2.2.27 0.00000000000000000000000000000003447 135.0
DYD3_k127_5213976_3 more specifically in 18S rRNA pseudouridylation and in cleavage of pre-rRNA K11130 - - 0.00000000007357 65.0
DYD3_k127_5235251_0 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) - - - 5.399e-208 658.0
DYD3_k127_5235251_1 Acetyl-coenzyme A synthetase N-terminus K01895 - 6.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003233 565.0
DYD3_k127_5235251_10 Probable molybdopterin binding domain - - - 0.0000000000000000000000000000000362 146.0
DYD3_k127_5235251_11 Biotin-requiring enzyme - - - 0.000000000000007266 86.0
DYD3_k127_5235251_12 Transcriptional regulator - - - 0.000000001401 63.0
DYD3_k127_5235251_2 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015672,GO:0015980,GO:0015988,GO:0015990,GO:0016020,GO:0022900,GO:0022904,GO:0034220,GO:0044237,GO:0044464,GO:0045333,GO:0051179,GO:0051234,GO:0055085,GO:0055114,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:1902600 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004022 541.0
DYD3_k127_5235251_3 Carbamoyl-phosphate synthetase large chain domain protein K01959 - 6.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006104 500.0
DYD3_k127_5235251_4 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002181 313.0
DYD3_k127_5235251_5 COG2301 Citrate lyase beta subunit K01644 - 4.1.3.34 0.00000000000000000000000000000000000000000000000000000000002146 216.0
DYD3_k127_5235251_6 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000001303 199.0
DYD3_k127_5235251_7 COG1845 Heme copper-type cytochrome quinol oxidase, subunit 3 K02276 - 1.9.3.1 0.00000000000000000000000000000000000000000000001215 181.0
DYD3_k127_5235251_8 COG2030 Acyl dehydratase - - - 0.000000000000000000000000000000000000003584 158.0
DYD3_k127_5235251_9 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.0000000000000000000000000000000005326 145.0
DYD3_k127_5237949_0 Amidase K01426 - 3.5.1.4 0.0000000000000000000000000000000000004603 147.0
DYD3_k127_5253276_0 MASE1 - - - 0.00000000000000000000000000000000001677 154.0
DYD3_k127_5253276_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000002541 118.0
DYD3_k127_5253276_2 oxidoreductase FAD NAD(P)-binding domain protein K00523 - 1.17.1.1 0.000000000692 67.0
DYD3_k127_527736_0 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004344 371.0
DYD3_k127_5281788_0 glutamate dehydrogenase [NAD(P)+] activity K00261 - 1.4.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000244 503.0
DYD3_k127_5281788_1 acetyltransferase component of pyruvate dehydrogenase complex K00627 - 2.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000001418 267.0
DYD3_k127_5281788_2 - - - - 0.00000001302 66.0
DYD3_k127_5291621_0 Protein of unknown function (DUF1616) - - - 0.00000008284 65.0
DYD3_k127_5291621_1 chlorophyll binding - - - 0.0000004407 63.0
DYD3_k127_5357250_0 Carboxypeptidase regulatory-like domain - - - 0.0003011 52.0
DYD3_k127_5398964_0 Belongs to the archaeal adenylate kinase family K00939 - 2.7.4.3 0.00000000000000000000000000000000000000000000000000005331 194.0
DYD3_k127_5398964_1 NmrA-like family K00329,K00356 - 1.6.5.3,1.6.99.3 0.00000000000000000000000000000000000000000001916 173.0
DYD3_k127_5398964_2 AsnC family K03718 - - 0.000000000000000000000000000000000000006426 152.0
DYD3_k127_5398964_3 Belongs to the cytidylate kinase family. Type 2 subfamily K00945 - 2.7.4.25 0.0000000000000000000000000000000000002756 148.0
DYD3_k127_5398964_4 Integral membrane protein DUF106 - - - 0.0000000000000000000000000002454 123.0
DYD3_k127_5401650_0 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058,K18916 - 1.1.1.399,1.1.1.95,1.20.1.1 0.0000000000000000000000000000000000000000000000000000000000000115 226.0
DYD3_k127_5401650_1 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K01281 - 3.4.14.11 0.0000000008661 69.0
DYD3_k127_5405663_0 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002599 413.0
DYD3_k127_5405663_1 Acetyltransferase (GNAT) domain K03789 - 2.3.1.128 0.0000000000000001068 89.0
DYD3_k127_5405663_2 Uncharacterised protein family UPF0058 - - - 0.000000000000000171 82.0
DYD3_k127_5427758_0 COGs COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL CutL homologs K04108 - 1.3.7.9 7.377e-206 669.0
DYD3_k127_5427758_1 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 0.000000000000000002428 85.0
DYD3_k127_5483852_0 PFAM Sulfate transporter antisigma-factor antagonist STAS K03321 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006924 496.0
DYD3_k127_5483852_1 Belongs to the FPG family K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006607 375.0
DYD3_k127_5483852_10 NADH dehydrogenase - - - 0.00000000000000000000000000002962 124.0
DYD3_k127_5483852_11 HxlR-like helix-turn-helix - - - 0.0000000000000000001439 93.0
DYD3_k127_5483852_12 hydrogenase 4 membrane K12140 - - 0.000000000000000001076 99.0
DYD3_k127_5483852_13 Belongs to the SUI1 family K03113 GO:0001731,GO:0002181,GO:0002183,GO:0002188,GO:0002190,GO:0002192,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0065003,GO:0070992,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:0110017,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000001606 81.0
DYD3_k127_5483852_14 Response regulator, receiver K11443 - - 0.0000000003247 66.0
DYD3_k127_5483852_2 DNA polymerase elongation subunit (Family B) K02319 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 315.0
DYD3_k127_5483852_3 Respiratory-chain NADH dehydrogenase, 30 Kd subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002747 297.0
DYD3_k127_5483852_4 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000008898 260.0
DYD3_k127_5483852_5 Proton-conducting membrane transporter K12141 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001494 271.0
DYD3_k127_5483852_6 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.000000000000000000000000000000000000000000001236 174.0
DYD3_k127_5483852_7 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000007697 167.0
DYD3_k127_5483852_8 methylamine metabolic process K03885,K15977 - 1.6.99.3 0.0000000000000000000000000000000000000009305 154.0
DYD3_k127_5483852_9 esterase of the alpha-beta hydrolase superfamily - - - 0.0000000000000000000000000000000002 143.0
DYD3_k127_5497822_0 Responsible for synthesis of pseudouridine from uracil- 54 and uracil-55 in the psi GC loop of transfer RNAs K07583 - 5.4.99.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001727 301.0
DYD3_k127_5497822_1 cation diffusion facilitator family transporter K16264 - - 0.0000000000000000000000000000000000000000000000000000000000002756 226.0
DYD3_k127_5497822_2 Belongs to the eukaryotic ribosomal protein eL21 family K02889 - - 0.0000000000000000000000002977 107.0
DYD3_k127_5497822_3 RNA polymerase K03051 - 2.7.7.6 0.00000000000000003162 86.0
DYD3_k127_5497822_4 transcriptional regulator K07722 - - 0.000001406 57.0
DYD3_k127_5498765_0 Subtilase family K17734 - - 0.00000000000000000000000000000000000000000000000000000000000001347 233.0
DYD3_k127_5498765_1 AAA domain - - - 0.000000000000000000000000000000000000000005225 169.0
DYD3_k127_5518301_0 Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation K03432 GO:0000502,GO:0005575,GO:0005622,GO:0005623,GO:0005839,GO:0019773,GO:0032991,GO:0044424,GO:0044464,GO:1902494,GO:1905368,GO:1905369 3.4.25.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002862 326.0
DYD3_k127_5518301_1 COG1078 HD superfamily phosphohydrolases K06885 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004742 296.0
DYD3_k127_5518301_10 HicB_like antitoxin of bacterial toxin-antitoxin system - - - 0.000000002961 66.0
DYD3_k127_5518301_11 PFAM PKD domain containing protein - - - 0.00003343 56.0
DYD3_k127_5518301_12 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.00007481 56.0
DYD3_k127_5518301_2 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000009466 263.0
DYD3_k127_5518301_3 Shwachman-Bodian-Diamond syndrome (SBDS) protein K14574 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000003521 250.0
DYD3_k127_5518301_4 Peptidase family M50 - - - 0.000000000000000000000000000000000000000000000000000000000004753 228.0
DYD3_k127_5518301_5 SMART Peptidase A22, presenilin signal peptide - - - 0.000000000000000000000000000000000000000000000000001023 198.0
DYD3_k127_5518301_6 PFAM HhH-GPD K07457 - - 0.000000000000000000000000000000000000000000000000005086 192.0
DYD3_k127_5518301_7 peptidyl-prolyl cis-trans isomerase K01802,K03775 - 5.2.1.8 0.00000000000000000000000000000000000000000009673 168.0
DYD3_k127_5518301_8 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000007052 140.0
DYD3_k127_5518301_9 HicA toxin of bacterial toxin-antitoxin, - - - 0.000000000001419 70.0
DYD3_k127_5528503_0 Is also involved in protein lipoylation via its role as an octanoyl lipoyl carrier protein intermediate K02437 - - 0.0000000000000000000000000000000000000000009504 161.0
DYD3_k127_5528503_1 COG0642 Signal transduction histidine kinase - - - 0.000000000000000000000000882 121.0
DYD3_k127_5528503_2 HD domain - - - 0.00000000000006437 78.0
DYD3_k127_5528503_3 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.00000007736 54.0
DYD3_k127_5528503_4 PFAM PKD domain containing protein - - - 0.00005182 56.0
DYD3_k127_5528503_5 PFAM THUMP domain protein K06963 - - 0.0001761 52.0
DYD3_k127_5533949_0 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K15778 - 5.4.2.2,5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002385 445.0
DYD3_k127_5533949_1 Metallopeptidase family M24 K01271 - 3.4.13.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002605 309.0
DYD3_k127_5533949_10 Belongs to the UPF0216 family K09737 - - 0.00000000000000003305 87.0
DYD3_k127_5533949_11 - - - - 0.0000000002557 69.0
DYD3_k127_5533949_12 Leishmanolysin - - - 0.000001181 59.0
DYD3_k127_5533949_2 amino acid K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004739 315.0
DYD3_k127_5533949_3 Nucleotidyl transferase K00966 - 2.7.7.13 0.0000000000000000000000000000000000000000000000000000002889 207.0
DYD3_k127_5533949_4 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K03151 - 2.8.1.4 0.000000000000000000000000000000000000000000000000000008499 203.0
DYD3_k127_5533949_5 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.00000000000000000000000000000000000000000000000000003488 199.0
DYD3_k127_5533949_6 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000001575 160.0
DYD3_k127_5533949_7 Peptidase family M28 - - - 0.0000000000000000000001087 111.0
DYD3_k127_5533949_8 PFAM NUDIX hydrolase - - - 0.000000000000000000007335 101.0
DYD3_k127_5533949_9 Tripartite tricarboxylate transporter TctA family K08971 - - 0.000000000000000002131 94.0
DYD3_k127_5537773_0 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000000000000000000007461 203.0
DYD3_k127_5537773_1 - - - - 0.0000000000000000517 92.0
DYD3_k127_5552432_0 alcohol dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000017 341.0
DYD3_k127_5552432_1 dipeptidyl-peptidase K01281 - 3.4.14.11 0.000000000000000000000000004595 127.0
DYD3_k127_5552432_2 Methyltransferase domain - - - 0.0000000000004885 78.0
DYD3_k127_5588635_0 PFAM cobalamin B12-binding domain protein K01849 - 5.4.99.2 0.0000000000000000000000000000000000000000000000000003849 188.0
DYD3_k127_5617666_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823,K03918 - 2.6.1.19,2.6.1.36 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001986 469.0
DYD3_k127_5617666_1 PFAM PKD domain containing protein - - - 0.0003354 48.0
DYD3_k127_5644132_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009121 576.0
DYD3_k127_5644132_1 FMN-dependent dehydrogenase K11517 - 1.1.3.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 363.0
DYD3_k127_5644132_2 Sugar (and other) transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001447 282.0
DYD3_k127_5644132_3 With S4 and S12 plays an important role in translational accuracy K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005322 282.0
DYD3_k127_5644132_4 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000005062 174.0
DYD3_k127_5644132_5 Ribosomal protein L30 K02907 GO:0000463,GO:0000470,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000001567 160.0
DYD3_k127_5644132_6 Binds to the 23S rRNA K02885 - - 0.00000000000000000000000000000000000005962 152.0
DYD3_k127_5644132_7 structural constituent of ribosome K02912 - - 0.0000000000000000000000000004301 124.0
DYD3_k127_5644132_8 binds to the 23S rRNA K02876 - - 0.000000000000005524 83.0
DYD3_k127_5644132_9 Winged helix-turn-helix DNA-binding - - - 0.0000001334 61.0
DYD3_k127_564414_0 Aldehyde dehydrogenase family K00294 - 1.2.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008489 495.0
DYD3_k127_564414_1 COG1668 ABC-type Na efflux pump, permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003424 281.0
DYD3_k127_564414_2 ABC-type multidrug transport system, ATPase component K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002028 260.0
DYD3_k127_564414_3 COG1668 ABC-type Na efflux pump, permease component - - - 0.0000000000000000000000000000000000000000000000000000005815 205.0
DYD3_k127_564414_4 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.0000000000000000000000000000000000000000000000006204 197.0
DYD3_k127_5660734_0 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity K00303 - 1.5.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004167 337.0
DYD3_k127_5660734_1 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000001318 246.0
DYD3_k127_5660734_2 3-demethylubiquinone-9 3-O-methyltransferase activity K03428 - 2.1.1.11 0.000000000000000000000000005757 119.0
DYD3_k127_5660734_3 Amidase K01426 - 3.5.1.4 0.00000000000000000000004062 107.0
DYD3_k127_5665800_0 PFAM Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000001786 229.0
DYD3_k127_5665800_1 Protein of unknown function DUF72 - - - 0.000000000000000001895 94.0
DYD3_k127_5665800_2 PFAM fumarylacetoacetate (FAA) hydrolase K01826 - 5.3.3.10 0.000000002117 64.0
DYD3_k127_5677415_0 Beta-Casp domain K07577 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 417.0
DYD3_k127_5677415_1 Isocitrate/isopropylmalate dehydrogenase K00031 - 1.1.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002037 412.0
DYD3_k127_5677415_2 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B K02823 - - 0.00000000000000000000000000000000000000000000000000000000001759 216.0
DYD3_k127_5677415_3 Lrp/AsnC ligand binding domain - - - 0.0000000000000000000000000000009096 123.0
DYD3_k127_5677415_4 Enoyl-(Acyl carrier protein) reductase - - - 0.000000001506 71.0
DYD3_k127_5677415_5 - - - - 0.00001063 51.0
DYD3_k127_5695235_0 domain, Protein - - - 0.0000000000000000000000000000000000000000002031 182.0
DYD3_k127_5711814_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 6.614e-214 677.0
DYD3_k127_5711814_1 Aminotransferase class I and II K00812 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002909 360.0
DYD3_k127_5711814_2 Belongs to the eIF-2B alpha beta delta subunits family K03680 - - 0.0000000000000000000000000000000005675 143.0
DYD3_k127_5711814_3 nucleic acid-binding protein, consists of a PIN domain and a Zn-ribbon module K07060 - - 0.0000000000000000006729 93.0
DYD3_k127_5711814_4 - - - - 0.0000005113 57.0
DYD3_k127_5714045_0 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000001478 263.0
DYD3_k127_5717610_0 PFAM 3-hydroxyacyl-CoA dehydrogenase K00074,K15016 - 1.1.1.157,1.1.1.35,4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006277 432.0
DYD3_k127_5717610_1 ZIP Zinc transporter - - - 0.000000000000000000000000000000000000000000003501 175.0
DYD3_k127_5717610_2 Glycerol-3-phosphate dehydrogenase K00057 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016616,GO:0047952,GO:0055114 1.1.1.94 0.00000000000000000000000000000000000000003873 156.0
DYD3_k127_5717610_3 metal-dependent phosphohydrolase, HD sub domain K03698 - - 0.0000000000000000000000000000000000000001004 158.0
DYD3_k127_5717610_4 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.00000000000000000000000000000000001866 143.0
DYD3_k127_5717610_5 Domain of unknown function (DUF309) K09763 - - 0.00000000005006 72.0
DYD3_k127_575146_0 ABC transporter, transmembrane region K06147,K11085 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 512.0
DYD3_k127_575146_1 O-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000387 334.0
DYD3_k127_575146_2 AAA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000296 244.0
DYD3_k127_5771371_0 Belongs to the DEAD box helicase family K05592 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000147 392.0
DYD3_k127_5771371_1 pfkB family carbohydrate kinase K22026 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008906,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019200,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046835,GO:0046872,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.1.213,2.7.1.73 0.000000000000000000000000014 115.0
DYD3_k127_5771371_2 Alpha/beta hydrolase family K06889 - - 0.00004086 56.0
DYD3_k127_5773530_0 exo-alpha-(2->6)-sialidase activity - - - 0.000000000014 77.0
DYD3_k127_5773530_1 protein conserved in archaea - - - 0.0000001734 63.0
DYD3_k127_5773530_2 exo-alpha-(2->6)-sialidase activity - - - 0.000002664 60.0
DYD3_k127_5791477_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008748 322.0
DYD3_k127_5791477_1 PFAM periplasmic binding protein K02016 - - 0.0000000000000000000000000000000000000000000000000000000000000002837 231.0
DYD3_k127_5791477_2 PFAM TonB-dependent Receptor Plug - - - 0.000003365 58.0
DYD3_k127_5791477_3 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.000004425 49.0
DYD3_k127_579282_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 GO:0003674,GO:0003824,GO:0004018,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016829,GO:0016840,GO:0016842,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046033,GO:0046390,GO:0046483,GO:0055086,GO:0070626,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001293 422.0
DYD3_k127_579282_1 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006729 345.0
DYD3_k127_579282_2 Belongs to the acylphosphatase family K01512 GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818 3.6.1.7 0.00000000000000000000000007655 110.0
DYD3_k127_5825198_0 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.000000000000000000000000000000000000008251 162.0
DYD3_k127_5825198_1 RNA polymerase subunit 9 K03057 - - 0.0000000103 67.0
DYD3_k127_5845700_0 Glycosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000001256 235.0
DYD3_k127_5845700_1 Mechanosensitive ion channel K03442 - - 0.000000000000000000000000000000000000000000004685 179.0
DYD3_k127_5845700_2 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000402 101.0
DYD3_k127_5846185_0 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.000000000000000000000000000000000000000000004998 182.0
DYD3_k127_585989_0 Zn-dependent hydrolases of the beta-lactamase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004468 291.0
DYD3_k127_585989_1 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000002354 227.0
DYD3_k127_5867387_0 Copper resistance protein CopC K14166 - - 0.000000000000000000003415 109.0
DYD3_k127_5869810_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 3.661e-222 725.0
DYD3_k127_5869810_1 Alanine-glyoxylate amino-transferase K05825 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 395.0
DYD3_k127_5869810_2 Catalyzes the phosphorylation of (R)-mevalonate (MVA) to (R)-mevalonate 5-phosphate (MVAP). Functions in the mevalonate (MVA) pathway leading to isopentenyl diphosphate (IPP), a key precursor for the biosynthesis of isoprenoid compounds such as archaeal membrane lipids K00869 GO:0003674,GO:0003824,GO:0004496,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006084,GO:0006139,GO:0006163,GO:0006629,GO:0006637,GO:0006644,GO:0006720,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008202,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009150,GO:0009240,GO:0009259,GO:0009987,GO:0016125,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019287,GO:0019637,GO:0019693,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0035383,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046490,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901135,GO:1901360,GO:1901564,GO:1901576,GO:1901615 2.7.1.36 0.00000000000000000000000000000000000000000000000000000000000000000000000000004824 273.0
DYD3_k127_5869810_3 Belongs to the universal ribosomal protein uL16 family K02866 - - 0.0000000000000000000000000000000000000000000000001463 182.0
DYD3_k127_5869810_4 Sodium hydrogen exchanger K11105 - - 0.00000000000000000000000000000000000243 154.0
DYD3_k127_5869810_5 Catalyzes the formation of isopentenyl diphosphate (IPP), the building block of all isoprenoids K06981 - 2.7.4.26 0.0000000000000000000000006943 114.0
DYD3_k127_5869810_6 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.000000000000000000002156 105.0
DYD3_k127_5882656_0 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003568 345.0
DYD3_k127_5882656_1 ABC transporter substrate binding protein - - - 0.000000000000000000000000000000000000000000000000000000000001832 226.0
DYD3_k127_5882656_2 Xaa-Pro dipeptidyl-peptidase K01281 - 3.4.14.11 0.0000000000000000000000000000000000000000000000000000000001874 227.0
DYD3_k127_5903793_0 ATPase involved in replication control, Cdc46 Mcm family K10726 - - 1.851e-228 764.0
DYD3_k127_5903793_1 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 524.0
DYD3_k127_5903793_2 Belongs to the ABC transporter superfamily K02052,K02062 - - 0.0000000000000000000000000000000000000000000000000000000000000001472 245.0
DYD3_k127_5903793_3 PFAM Binding-protein-dependent transport system inner membrane component K02063 - - 0.0000000000000000000000000000000000000001327 162.0
DYD3_k127_5903793_4 Protein of unknown function (DUF424) K09148 - - 0.0000000000000000000005841 100.0
DYD3_k127_5903793_5 - - - - 0.0001019 51.0
DYD3_k127_5916034_0 bifunctional purine biosynthesis protein purh K00602 GO:0003674,GO:0003824,GO:0004643,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016742,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.2.3,3.5.4.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007624 527.0
DYD3_k127_5916034_1 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.00000000000000000000004076 102.0
DYD3_k127_593411_0 PFAM PilT protein domain protein K06865 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000326 575.0
DYD3_k127_593411_1 HTH-type transcriptional regulatory protein K07728 - - 0.000000000000000000000000000000000000000000000000000000000000001171 230.0
DYD3_k127_593411_2 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000006289 164.0
DYD3_k127_5934160_0 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds K12251 - 3.5.1.53 0.00000000000000000000000000000000000000000000000000000000000000000000000007013 258.0
DYD3_k127_5949664_0 acyl-CoA dehydrogenase K00248,K00249 - 1.3.8.1,1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001406 436.0
DYD3_k127_5949664_1 LAO AO transport system K07588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002103 334.0
DYD3_k127_5949664_10 Belongs to the UPF0248 family K09715 - - 0.0000007985 54.0
DYD3_k127_5949664_2 ATPases associated with a variety of cellular activities K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004478 310.0
DYD3_k127_5949664_3 Nucleolar GTP-binding protein 1 (NOG1) K06943 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001788 276.0
DYD3_k127_5949664_4 TIGRFAM TIGR00268 family protein K06864 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001925 249.0
DYD3_k127_5949664_5 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.0000000000000000000000000000000000000000000000000000000000000008794 231.0
DYD3_k127_5949664_6 Involved in septum formation K06287 GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0005575,GO:0005623,GO:0007049,GO:0008150,GO:0009987,GO:0016043,GO:0022402,GO:0022607,GO:0030428,GO:0032506,GO:0044085,GO:0044464,GO:0051301,GO:0061640,GO:0071840,GO:0090529,GO:1902410,GO:1903047 - 0.0000000000000000000000000000000000000000002428 176.0
DYD3_k127_5949664_7 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.000000000000000000000000003314 115.0
DYD3_k127_5949664_8 threonine efflux protein - - - 0.00000000000000007632 89.0
DYD3_k127_5949664_9 ABC-2 family transporter protein K01992 - - 0.0000000000000003474 92.0
DYD3_k127_5952661_0 Involved in regulation of DNA replication K10725 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008339 505.0
DYD3_k127_5952661_1 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0043021,GO:0043022,GO:0044424,GO:0044464,GO:0044877 - 0.0000000000000000000000000000000000000000000000000000000000004934 229.0
DYD3_k127_5952661_2 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.0000000000000000000000000000000000000000000003496 190.0
DYD3_k127_5952661_3 Catalyzes the dephosphorylation of 2-phosphoglycolate K22223 - 3.1.3.18 0.0000000000000000000000000001176 124.0
DYD3_k127_5952661_4 PRC-barrel domain - - - 0.000000000000009297 77.0
DYD3_k127_5964071_0 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) K22503 - 6.1.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000811 459.0
DYD3_k127_5964071_1 Pfam:DUF137 K09722 - 6.3.2.36 0.00000000000000000000000000000000000000000000000000000000000000008154 233.0
DYD3_k127_5964071_2 Phosphotransferase enzyme family - - - 0.0000000000000000000000000000000000000000000000004195 194.0
DYD3_k127_5964071_3 Putative small multi-drug export protein - - - 0.0000001892 62.0
DYD3_k127_5964071_4 Integral membrane protein TerC family - - - 0.00002959 54.0
DYD3_k127_5999800_0 domain protein K14475 - - 0.0002752 52.0
DYD3_k127_6006678_0 Archaeal Nre, N-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006987 297.0
DYD3_k127_6006678_1 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000007281 176.0
DYD3_k127_6006678_2 Pfam:Methyltransf_26 K07446 GO:0000049,GO:0001510,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004809,GO:0005488,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0140098,GO:0140101,GO:1901360,GO:1901363 2.1.1.213 0.000000000000000000000000000000000000000001888 169.0
DYD3_k127_6006678_3 Domain of unknown function (DUF4383) - - - 0.0000000000002336 75.0
DYD3_k127_6049704_0 P-type atpase K17686 - 3.6.3.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000155 607.0
DYD3_k127_6049704_1 Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with geranylgeranyl diphosphate (GGPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30E,34E,38E)-undecaprenyl diphosphate (tritrans,heptacis-UPP). It is probably the precursor of glycosyl carrier lipids K15888 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.89 0.000000000000000000000000000000000000000000000000000002299 198.0
DYD3_k127_6049704_2 Domain of unknown function (DUF4332) - - - 0.00000001416 65.0
DYD3_k127_6053823_0 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 381.0
DYD3_k127_6053823_1 Domain of unknown function (DUF1330) - - - 0.000000000000000007288 98.0
DYD3_k127_6053823_2 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.00000000000000006889 81.0
DYD3_k127_6053823_3 COG1522 Transcriptional regulators - - - 0.00001172 55.0
DYD3_k127_6067197_0 Structure-specific nuclease with 5'-flap endonuclease and 5'-3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double- stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. Acts as a genome stabilization factor that prevents flaps from equilibrating into structurs that lead to duplications and deletions. Also possesses 5'-3' exonuclease activity on nicked or gapped double-stranded DNA K04799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001753 359.0
DYD3_k127_6067197_1 Oxidoreductase molybdopterin binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007431 241.0
DYD3_k127_6067197_2 PFAM elongation factor Tu domain 2 - - - 0.0000000000000000000000000000000000000000000000000002144 194.0
DYD3_k127_6067197_3 Transcriptional regulator K02529 - - 0.000000001939 64.0
DYD3_k127_6088717_0 Threonine dehydratase K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007121 404.0
DYD3_k127_6088717_1 PFAM Aldehyde dehydrogenase family K00128,K00131,K00146,K00151,K10217 - 1.2.1.3,1.2.1.32,1.2.1.39,1.2.1.60,1.2.1.85,1.2.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003335 351.0
DYD3_k127_6088717_2 Domain of unknown function (DUF4442) - - - 0.0000000000000000000000000000000000005639 148.0
DYD3_k127_6088717_3 Phosphatidylethanolamine-binding protein K06910 - - 0.00000000000000000000000000000004857 136.0
DYD3_k127_6088717_4 Protein of unknown function (DUF3088) - - - 0.00000000000000000000006806 102.0
DYD3_k127_6088717_5 membrane-associated protein - - - 0.00000000000000679 86.0
DYD3_k127_6096469_0 Protein of unknown function (DUF4256) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002586 274.0
DYD3_k127_6096469_1 protein conserved in archaea - - - 0.000002431 57.0
DYD3_k127_6111654_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 3.689e-283 894.0
DYD3_k127_6111654_1 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000002378 213.0
DYD3_k127_6111654_2 S-adenosyl-L-methionine-dependent transferase that acts as a component of the wyosine derivatives biosynthesis pathway. Catalyzes the transfer of the alpha-amino-alpha-carboxypropyl (acp) group from S-adenosyl-L-methionine to 4-demethylwyosine (imG-14), forming 7-aminocarboxypropyl-demethylwyosine (wybutosine-86) at position 37 of tRNA(Phe) K07055 - 2.5.1.114 0.0000000000000000000000000000000000000000000000000000008884 209.0
DYD3_k127_6111654_3 metal ion transport - - - 0.00000000000000000000000000000000000000000009474 164.0
DYD3_k127_6111654_4 pre-rRNA processing protein involved in ribosome biogenesis K09140 - - 0.000000000000000000000000000000000000000319 159.0
DYD3_k127_6111654_5 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.000000000000000000000000001946 122.0
DYD3_k127_6111654_6 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.0000000000000000000000016 113.0
DYD3_k127_6111654_7 Belongs to the eukaryotic ribosomal protein eL40 family K02927 - - 0.000000000002633 70.0
DYD3_k127_6111654_8 ACT domain K09707 - - 0.0000002055 58.0
DYD3_k127_6111654_9 TonB dependent receptor K02014,K16087 - - 0.0000148 57.0
DYD3_k127_6113312_0 pyruvate flavodoxin ferredoxin oxidoreductase K00174 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 556.0
DYD3_k127_6113312_1 Pyruvate ferredoxin oxidoreductase beta subunit C terminal K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007039 351.0
DYD3_k127_6113312_2 Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats - - - 0.0005108 52.0
DYD3_k127_61140_0 Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively K06215 - 4.3.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003701 391.0
DYD3_k127_61140_1 UbiA prenyltransferase family K02548 - 2.5.1.74 0.000000000000000000000000000000000000000000000000000000003138 208.0
DYD3_k127_61140_2 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.000000000000000000000000000000000000000000003549 176.0
DYD3_k127_61140_3 Prolyl oligopeptidase family - - - 0.000000000000000000000194 109.0
DYD3_k127_61140_4 - - - - 0.000000000000001657 81.0
DYD3_k127_61140_5 Uncharacterized protein conserved in bacteria (DUF2255) - - - 0.00000000000001085 81.0
DYD3_k127_61140_6 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000006702 61.0
DYD3_k127_61140_7 photoreceptor activity K13924 - 2.1.1.80,3.1.1.61 0.00004647 53.0
DYD3_k127_6140325_0 PFAM aspartate ornithine carbamoyltransferase carbamoyl-P binding domain K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 374.0
DYD3_k127_6140325_1 PFAM Sodium hydrogen exchanger family - - - 0.000000000000000000000000000000000000000000000000000000000000000001166 244.0
DYD3_k127_6140325_2 Kelch motif - - - 0.000000000000000000000000000000000000000000000000000000004311 211.0
DYD3_k127_6140325_3 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.000000000000000000000000000000000000000000000000005778 187.0
DYD3_k127_6140325_4 Involved in allosteric regulation of aspartate carbamoyltransferase K00610 - - 0.000000000000000000000000000000000000000000002529 170.0
DYD3_k127_6140325_5 - - - - 0.00000008962 62.0
DYD3_k127_6151303_0 FeS assembly protein SufB K07033,K09014 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006790,GO:0008150,GO:0008152,GO:0009536,GO:0009842,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0031163,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044085,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0051186,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0071840 - 3.685e-248 774.0
DYD3_k127_6151303_1 protein conserved in archaea - - - 0.0000000002734 73.0
DYD3_k127_6158363_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009412 411.0
DYD3_k127_6158363_1 Conserved hypothetical protein 698 - - - 0.000000000000000000000000000000000000000000000000000000000000001584 230.0
DYD3_k127_6158363_2 dUTPase K01494 - 3.5.4.13 0.00000000000000000000000000000000000000000002861 168.0
DYD3_k127_6158363_3 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000000004142 136.0
DYD3_k127_6158363_4 Putative zinc- or iron-chelating domain K06940 - - 0.00000000000000000000000001275 113.0
DYD3_k127_6158363_5 DNA binding protein - - - 0.00000005193 63.0
DYD3_k127_6163058_0 Glucose sorbosone - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000448 361.0
DYD3_k127_6163058_1 peptidase S15 K06978 - - 0.000000000000000166 87.0
DYD3_k127_6163297_0 KH, type 1, domain K07041 - - 2.652e-247 778.0
DYD3_k127_6163297_1 Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation K03433 GO:0000502,GO:0003674,GO:0003824,GO:0004175,GO:0004298,GO:0005575,GO:0005622,GO:0005623,GO:0005839,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0010498,GO:0016787,GO:0019538,GO:0019774,GO:0030163,GO:0032991,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044464,GO:0051603,GO:0070003,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1905368,GO:1905369 3.4.25.1 0.00000000000000000000000000000000000000000000000000000000000000000000002599 248.0
DYD3_k127_6163297_2 Peptidase family M50 - - - 0.0000000000000003322 85.0
DYD3_k127_6163297_3 Transcriptional regulator PadR-like family K10947 - - 0.0001907 45.0
DYD3_k127_618081_1 - - - - 0.00001542 59.0
DYD3_k127_618235_0 acyl-CoA dehydrogenase K18244 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 428.0
DYD3_k127_618235_1 Phosphoribosylglycinamide synthetase, C domain K01945 - 6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008174 426.0
DYD3_k127_618235_2 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000455 250.0
DYD3_k127_618235_3 Conserved hypothetical ATP binding protein K06883 - - 0.000000000000000000000000000000000000000000000000000000000000000002269 236.0
DYD3_k127_618235_4 Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions K02201 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 0.00000000000000000000000000000000000000000000000000000000001392 225.0
DYD3_k127_618235_5 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.000000000000000000000000000000000000000005481 161.0
DYD3_k127_618235_6 Methyltransferase K15429 - 2.1.1.228 0.00000000000000000000000000004254 123.0
DYD3_k127_618235_7 guanyl-nucleotide exchange factor activity - - - 0.00000001941 65.0
DYD3_k127_618235_9 cell wall anchor domain - - - 0.0001223 54.0
DYD3_k127_6199504_0 TCP-1/cpn60 chaperonin family K22447 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0044183,GO:0051082,GO:0061077 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002033 389.0
DYD3_k127_6199504_1 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000129 299.0
DYD3_k127_6199504_2 Amino acid permease K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005641 279.0
DYD3_k127_6199504_3 PFAM ornithine cyclodeaminase mu-crystallin K01750 - 4.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000002056 244.0
DYD3_k127_6199504_4 Histidine kinase - - - 0.00000000000000000000000000000000000000000000002576 190.0
DYD3_k127_6199504_5 PFAM metallophosphoesterase K06953 - - 0.000000000000000000000000000000000009087 149.0
DYD3_k127_6199504_6 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000001279 138.0
DYD3_k127_6199504_7 Contacts the emerging nascent chain on the ribosome K03626 - - 0.0000000000000000000000000002574 125.0
DYD3_k127_6199504_8 Catalyzes the reduction of arsenate As(V) to arsenite As(III) K03741 - 1.20.4.1 0.00000000000000000002069 100.0
DYD3_k127_6199504_9 domain protein - - - 0.0004578 51.0
DYD3_k127_6204092_0 COG1599 Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins K07466 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002641 259.0
DYD3_k127_6204092_1 DnaB-like helicase C terminal domain K08482 - - 0.00000000000000000000000000000000000000000000000000000000139 211.0
DYD3_k127_6204092_2 protein conserved in archaea K09746 - - 0.0000000000000000000000000000000000000000000000000003073 196.0
DYD3_k127_6205278_0 Patched family K07003 - - 0.0000000000002913 84.0
DYD3_k127_624317_0 Pyridoxal-phosphate dependent enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000007688 226.0
DYD3_k127_624317_1 Major facilitator Superfamily - - - 0.00000000000000000000000000000000001054 152.0
DYD3_k127_624317_2 PFAM Endoribonuclease L-PSP - - - 0.0000000000000000000000000000001683 136.0
DYD3_k127_624317_3 Carboxypeptidase regulatory-like domain - - - 0.0002175 52.0
DYD3_k127_6259253_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006851 432.0
DYD3_k127_6259253_1 Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine residue K00809 - 2.5.1.46 0.000000000000000000000000000000000000000000002703 171.0
DYD3_k127_6259253_2 pfkB family carbohydrate kinase K22026 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008906,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019200,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046835,GO:0046872,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.1.213,2.7.1.73 0.0000000000001515 79.0
DYD3_k127_6327175_0 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000977 334.0
DYD3_k127_6327175_1 ATPases associated with a variety of cellular activities K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005001 262.0
DYD3_k127_6327175_2 MacB-like periplasmic core domain K02004 - - 0.0000000000000453 81.0
DYD3_k127_6349123_0 Rad51 - - - 0.000000000000000000000000000000000000000000000000000000000000005173 227.0
DYD3_k127_6349123_1 Domain of unknown function (DU1801) - - - 0.0000000000000000000000000000000000000000127 159.0
DYD3_k127_6349123_2 Pfam:KaiC - - - 0.0000000000000000000000000009619 124.0
DYD3_k127_6349123_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000002928 98.0
DYD3_k127_6349123_4 cellulase activity - - - 0.0000000005421 71.0
DYD3_k127_6349123_5 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.00000002774 63.0
DYD3_k127_6349123_6 cheY-homologous receiver domain K03413 - - 0.0000002137 58.0
DYD3_k127_6349123_7 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000002885 58.0
DYD3_k127_6349123_8 glyoxalase III activity - - - 0.000004553 55.0
DYD3_k127_6356168_0 nucleic acid-binding protein, contains PIN domain K07065 - - 0.000000000009369 70.0
DYD3_k127_6356168_1 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000109 70.0
DYD3_k127_6356168_2 HxlR-like helix-turn-helix - - - 0.00000003134 60.0
DYD3_k127_6356168_3 - - - - 0.0001104 48.0
DYD3_k127_6356168_4 domain protein K14475 - - 0.0002795 52.0
DYD3_k127_6366105_0 AIR carboxylase K06898 - - 0.0000000000000000000000000000000000000000000000000005165 196.0
DYD3_k127_6366105_1 Zinc carboxypeptidase - - - 0.00000000000000000000000000000000000000000000004418 193.0
DYD3_k127_6366105_2 Thioredoxin K03671 - - 0.00000000000000000000000000000000003723 139.0
DYD3_k127_6366105_3 archaeal coiled-coil protein - - - 0.0000000000000000000000157 111.0
DYD3_k127_6366105_4 Bifunctional nuclease K08999 - - 0.0000000000000000005727 94.0
DYD3_k127_6366105_5 ACT domain protein - - - 0.00000000002752 69.0
DYD3_k127_6366105_6 nucleotidyltransferase activity K07075,K10439 - - 0.0000001228 61.0
DYD3_k127_6366105_7 Tonb-dependent siderophore receptor K02014 - - 0.000003917 58.0
DYD3_k127_6366105_8 HicB_like antitoxin of bacterial toxin-antitoxin system - - - 0.00001868 49.0
DYD3_k127_6375474_0 Acyl transferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001879 346.0
DYD3_k127_6385212_0 TatD related DNase K07049 - - 0.000000000000000000000000000000000000000000000000000000000004685 216.0
DYD3_k127_6385212_1 involved in cell wall biogenesis K00721 - 2.4.1.83 0.000000000000000007848 99.0
DYD3_k127_6385212_2 Glycosyltransferase family 87 - - - 0.00001702 59.0
DYD3_k127_6386937_0 D-aminoacyl-tRNA deacylase with broad substrate specificity. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo K09716 - 3.1.1.96 0.0000000000000000000000000000000000000001393 161.0
DYD3_k127_6386937_1 Methyltransferase domain - - - 0.00000000000000001592 88.0
DYD3_k127_6386937_2 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000866 72.0
DYD3_k127_6386937_3 Toxic component of a toxin-antitoxin (TA) module. An RNase K07062 - - 0.00000003292 60.0
DYD3_k127_6386937_4 - - - - 0.000009042 55.0
DYD3_k127_6396522_0 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate K07558 - 2.7.7.72 0.00000000000000000000000000000000000000000000000000000000000000000000008238 258.0
DYD3_k127_6396522_1 cytidine and deoxycytidylate deaminase zinc-binding region K01493 - 3.5.4.12 0.0000000000000000000000000000000000000001413 154.0
DYD3_k127_6396522_2 adenyl ribonucleotide binding - - - 0.000000000000000000000000000000000000002222 153.0
DYD3_k127_6396522_3 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.0000000000000001856 83.0
DYD3_k127_6413997_0 PFAM type II secretion system protein E K07332 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003345 542.0
DYD3_k127_6413997_1 Type II secretion system K07333 - - 0.00000000000000000000000000000000000000000000003024 181.0
DYD3_k127_6509782_0 Cys/Met metabolism PLP-dependent enzyme K01758 - 4.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000344 425.0
DYD3_k127_6509782_1 Pyridoxal-phosphate dependent enzyme K01697,K01738 - 2.5.1.47,4.2.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007027 304.0
DYD3_k127_6509782_2 Helix-turn-helix XRE-family like proteins - - - 0.00000000000000000000000000000167 128.0
DYD3_k127_6509782_3 Homoserine dehydrogenase K00003 - 1.1.1.3 0.00000008066 61.0
DYD3_k127_652197_0 PAS fold - - - 0.000000000000000000000000000000000000002347 168.0
DYD3_k127_652197_1 TIGRFAM peptidase S26B, signal peptidase K13280 - 3.4.21.89 0.0000000006854 73.0
DYD3_k127_652863_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 0.0000000000000000000000000000000000000000000000000000000000000000004844 235.0
DYD3_k127_652863_1 ATP-NAD AcoX kinase K00858 - 2.7.1.23 0.000000000000000000000000000000000000000000000000000000000000004183 232.0
DYD3_k127_652863_2 ATPases associated with a variety of cellular activities K16785,K16786,K16787 - - 0.00000000000000000000000000000000003174 152.0
DYD3_k127_652863_3 PFAM regulatory protein AsnC Lrp family K03719 - - 0.000000000001079 75.0
DYD3_k127_652863_4 Transcriptional regulator K07730 - - 0.00000000004377 73.0
DYD3_k127_652863_5 redox protein regulator of disulfide bond formation K07397 - - 0.000000001226 64.0
DYD3_k127_652863_6 Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates K16785 - - 0.000002123 59.0
DYD3_k127_652863_7 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.0000792 51.0
DYD3_k127_652863_8 ECF-type riboflavin transporter, S component K16927 - - 0.00008724 54.0
DYD3_k127_6546481_0 Deoxyhypusine synthase K00809 - 2.5.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000421 292.0
DYD3_k127_6546481_1 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 0.00000000000000000000000000000000000000000000000000000000000000000002501 241.0
DYD3_k127_6546481_2 CoA binding domain K06929 - - 0.000000000000000000000000000000009958 132.0
DYD3_k127_6546481_3 Protein of unknown function (DUF3772) K05802 - - 0.000000000000000000000000000001977 137.0
DYD3_k127_6546481_4 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K17884 - 2.7.8.39,2.7.8.5 0.00000000009322 67.0
DYD3_k127_6546481_5 Lrp/AsnC ligand binding domain - - - 0.000001289 53.0
DYD3_k127_6555104_0 Fructose-bisphosphate aldolase class-II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004079 459.0
DYD3_k127_6555104_1 Helix-hairpin-helix DNA-binding motif class 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003838 440.0
DYD3_k127_6555104_10 TonB dependent receptor - - - 0.0001883 53.0
DYD3_k127_6555104_11 PilT protein domain protein - - - 0.0006139 49.0
DYD3_k127_6555104_2 amino acid K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003585 399.0
DYD3_k127_6555104_3 6-phosphofructokinase activity K00850,K21071 - 2.7.1.11,2.7.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000416 380.0
DYD3_k127_6555104_4 Acyltransferase K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000007094 198.0
DYD3_k127_6555104_5 Phosphate acyltransferases K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000073 162.0
DYD3_k127_6555104_6 protein conserved in archaea - - - 0.0000000000000001698 91.0
DYD3_k127_6555104_7 domain, Protein - - - 0.00000000001001 79.0
DYD3_k127_6555104_8 Domain of unknown function (DUF4332) - - - 0.0000000000908 72.0
DYD3_k127_6555104_9 SpoVT / AbrB like domain K07172 - - 0.000001069 53.0
DYD3_k127_6563380_0 Predicted membrane protein (DUF2070) K08979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007994 258.0
DYD3_k127_6563380_1 Domain of unknown function (DU1801) - - - 0.00000000000000000000000000000000000001693 148.0
DYD3_k127_6563380_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000001359 108.0
DYD3_k127_6563380_3 L-carnitine dehydratase bile acid-inducible protein F K01796 - 5.1.99.4 0.000000000000000000000005251 110.0
DYD3_k127_6563380_4 transferase K18702 - 2.8.3.19 0.00000000000000002105 89.0
DYD3_k127_6583852_0 Exchanges the guanine residue with 7-cyano-7- deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D- loop) of archaeal tRNAs K18779 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046116,GO:0046483,GO:0055086,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006273 491.0
DYD3_k127_6583852_1 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.0000006168 54.0
DYD3_k127_6583852_2 Acyltransferase - - - 0.00001332 55.0
DYD3_k127_6624870_0 Anticodon-binding domain of tRNA K01873 - 6.1.1.9 1.405e-243 776.0
DYD3_k127_6624870_1 protein conserved in archaea - - - 0.000001881 57.0
DYD3_k127_6624870_2 EamA-like transporter family - - - 0.00002236 56.0
DYD3_k127_6624870_3 Toxic component of a toxin-antitoxin (TA) module. An RNase K18828 - - 0.0001534 49.0
DYD3_k127_6632916_0 SPTR Transposase, IS4 family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000001009 243.0
DYD3_k127_6640054_0 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000000000000000000000000007402 230.0
DYD3_k127_6640054_1 Amino acid permease K03294 - - 0.00000000000000000000000000000000000000000000000000000001038 216.0
DYD3_k127_6640054_2 aminotransferase class I and II - - - 0.0000000000000000000002573 109.0
DYD3_k127_6640054_3 - - - - 0.0000005306 62.0
DYD3_k127_6640054_4 Histidine kinase K02487,K06596 - - 0.00004961 52.0
DYD3_k127_6652394_0 PFAM short-chain dehydrogenase reductase SDR K15314 - - 0.000000000000000000000000000000009548 132.0
DYD3_k127_6652394_1 TIGRFAM TonB-dependent siderophore receptor K02014 - - 0.0001199 55.0
DYD3_k127_6654501_0 Major facilitator superfamily - - - 3.009e-197 628.0
DYD3_k127_6654501_1 PFAM Cupin 2, conserved barrel - - - 0.00000000000000000000000000000005439 129.0
DYD3_k127_6654501_2 Alpha/beta hydrolase family - - - 0.0000001807 55.0
DYD3_k127_6662391_0 GTP-binding protein K06883 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003654 289.0
DYD3_k127_6662391_1 Uncharacterized protein conserved in archaea (DUF2073) K09743 - - 0.00000000000000000000000003488 112.0
DYD3_k127_6662391_2 Zn-ribbon containing protein K07163 - - 0.00001509 56.0
DYD3_k127_6662391_3 Zn-ribbon containing protein K07163 - - 0.0004725 51.0
DYD3_k127_6664741_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000346 552.0
DYD3_k127_6664741_1 Hydrolase CocE NonD family K06978 - - 0.000000000000000000000000000000008154 145.0
DYD3_k127_6664741_2 Carboxypeptidase regulatory-like domain - - - 0.00006484 54.0
DYD3_k127_6667151_0 Involved in regulation of DNA replication K10725 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000114 259.0
DYD3_k127_6667151_1 PAS domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000061 207.0
DYD3_k127_6667151_2 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.00000000000000000000000000000000000000000000000005894 199.0
DYD3_k127_6667151_3 DsrE/DsrF/DrsH-like family - - - 0.0000000000000000000000000000000000000001211 165.0
DYD3_k127_6667151_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000003926 112.0
DYD3_k127_6667151_5 sulfur carrier activity K04085 GO:0008150,GO:0009987,GO:0019725,GO:0042592,GO:0048878,GO:0055082,GO:0065007,GO:0065008 - 0.0000000000000008453 84.0
DYD3_k127_6714865_0 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016740,GO:0016782,GO:0016783,GO:0016992,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0070283,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006308 366.0
DYD3_k127_6714865_1 Dehydrogenase E1 component K00161,K00166 - 1.2.4.1,1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001513 325.0
DYD3_k127_6714865_2 DNA polymerase alpha chain like domain K04477 - - 0.00000000000000000000000000001315 121.0
DYD3_k127_6714865_3 TonB dependent receptor - - - 0.00006653 54.0
DYD3_k127_6714865_4 Pyruvate 2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit K00162 - 1.2.4.1 0.0001006 46.0
DYD3_k127_6734787_0 cellular water homeostasis K05802 - - 0.000000000000000000000000000000000000000000001139 181.0
DYD3_k127_6734787_1 HD domain - - - 0.0000000000000003354 86.0
DYD3_k127_6734787_2 Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding K04797 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0016272,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0032991,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141 - 0.0000000003305 68.0
DYD3_k127_6734787_3 rRNA binding K02944 - - 0.000000002674 60.0
DYD3_k127_6742451_0 Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.0000000000000000000000000000000000000000000000000000000000000000006002 242.0
DYD3_k127_6742451_1 translation release factor activity K03265 - - 0.000000003912 64.0
DYD3_k127_6742451_2 CAAX protease self-immunity K07052 - - 0.0004271 50.0
DYD3_k127_6745974_0 Belongs to the RimK family K05844,K14940 - 6.3.2.32 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006079 332.0
DYD3_k127_6745974_1 succinate dehydrogenase subunit K06987 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004303 307.0
DYD3_k127_6753269_0 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.0000000000000000000000000000000000003739 149.0
DYD3_k127_6753269_1 BNR repeat-like domain - - - 0.0000005466 62.0
DYD3_k127_6753269_2 Belongs to the glycosyl hydrolase 8 (cellulase D) family - - - 0.0000007364 62.0
DYD3_k127_6758747_0 L-asparaginase II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006571 282.0
DYD3_k127_6758747_1 TIGRFAM RNA methyltransferase, TrmH family, group 1 K02533 - - 0.000000000000000000000000000000000000000000000001163 184.0
DYD3_k127_6758747_2 COG3425 3-hydroxy-3-methylglutaryl CoA synthase K01641,K07068 - 2.3.3.10 0.00000000000000000000004081 107.0
DYD3_k127_6758747_3 Small multi-drug export protein - - - 0.0000000000000000006428 99.0
DYD3_k127_6758747_4 Acid phosphatase homologues K19302 - 3.6.1.27 0.00000000000009297 83.0
DYD3_k127_6758747_5 TonB dependent receptor - - - 0.000002922 59.0
DYD3_k127_6772689_0 Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits K03236 - - 0.00000000000000000000000000000000000009536 145.0
DYD3_k127_6772689_1 receptor K02014 - - 0.000004515 58.0
DYD3_k127_6782664_0 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005603 374.0
DYD3_k127_6782664_1 Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family K03308 - - 0.00000000000000000000000000000000000000000000000000000000000000003183 240.0
DYD3_k127_6782664_2 LVIVD repeat - - - 0.00000000009986 74.0
DYD3_k127_6788260_0 Transmembrane exosortase (Exosortase_EpsH) - - - 0.000000571 61.0
DYD3_k127_682933_0 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K01281 - 3.4.14.11 0.000000000000000000000000000000000000000000000000000000005025 220.0
DYD3_k127_682933_1 Winged helix DNA-binding domain - - - 0.00000001224 61.0
DYD3_k127_682933_2 Cupredoxin-like domain - - - 0.000243 52.0
DYD3_k127_682933_3 Zinc metalloprotease (Elastase) - - - 0.0005058 53.0
DYD3_k127_6843680_0 Catalyzes the reversible interconversion of serine and glycine with a modified folate serving as the one-carbon carrier. Also exhibits a pteridine-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.000000000000000000000000000000000000000000000000005765 186.0
DYD3_k127_6843680_1 CDP-alcohol phosphatidyltransferase K17884 - 2.7.8.39 0.0000000000000000000000000000000000003982 149.0
DYD3_k127_6843680_2 Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates K18532 - 2.7.4.3 0.000000000000000000007193 104.0
DYD3_k127_6890760_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate K03330 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008292 472.0
DYD3_k127_6890760_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate K09482 - 6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 376.0
DYD3_k127_6899142_0 Fatty acid desaturase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001843 279.0
DYD3_k127_6899142_1 endonuclease III K01247 - 3.2.2.21 0.00000000000000000000000000000000000000000004068 168.0
DYD3_k127_6899142_2 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000000000000000004737 125.0
DYD3_k127_6899142_3 SOS response associated peptidase (SRAP) - - - 0.00000000000002102 81.0
DYD3_k127_6899142_4 transcriptional - - - 0.00000000000009655 78.0
DYD3_k127_6899142_5 Belongs to the SOS response-associated peptidase family - - - 0.000000000003726 76.0
DYD3_k127_6899142_6 SOS response associated peptidase (SRAP) - - - 0.00000000002282 76.0
DYD3_k127_6899142_7 protein conserved in archaea - - - 0.00002774 56.0
DYD3_k127_6901340_0 permease - - - 0.00000000000000000000000000000000000000000001434 177.0
DYD3_k127_6901340_1 dipeptidyl-peptidase K06978 - - 0.0000000000000002196 87.0
DYD3_k127_6901340_2 Sulfurtransferase K01011 - 2.8.1.1,2.8.1.2 0.0000000000000008811 79.0
DYD3_k127_6901340_3 TonB dependent receptor K02014 - - 0.000000004742 68.0
DYD3_k127_6901545_0 Belongs to the Dps family K04047 - - 0.0000000000000000000000000000000000000000000000001433 184.0
DYD3_k127_6911070_0 Chlorophyllase K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000009772 233.0
DYD3_k127_6911070_1 PFAM blue (type 1) copper domain protein K00368,K22348,K22349 - 1.16.3.3,1.7.2.1 0.0000000000000000000000000000000000000000000000000000000544 211.0
DYD3_k127_6911070_2 von Willebrand factor, type A K07114 - - 0.00000000000000000000000000000000000000000003401 171.0
DYD3_k127_6911070_3 Pfam Secreted repeat of - - - 0.0000000000000000000000000005195 127.0
DYD3_k127_6911070_4 response to oxidative stress K04063 - - 0.00000000000000000000000001007 115.0
DYD3_k127_6911070_5 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951,K01139 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0008728,GO:0008893,GO:0009116,GO:0009117,GO:0009119,GO:0009150,GO:0009259,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0015949,GO:0015969,GO:0016020,GO:0016740,GO:0016772,GO:0016778,GO:0016787,GO:0016788,GO:0016794,GO:0019637,GO:0019693,GO:0030312,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0033865,GO:0033875,GO:0034032,GO:0034035,GO:0034641,GO:0042278,GO:0042578,GO:0042594,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0071496,GO:0071704,GO:0071944,GO:0072521,GO:1901068,GO:1901135,GO:1901360,GO:1901564,GO:1901657 2.7.6.5,3.1.7.2 0.0000000000000000001386 97.0
DYD3_k127_6911070_6 Psort location Cytoplasmic, score 8.96 - - - 0.0000000000000000009377 93.0
DYD3_k127_6911070_8 LVIVD repeat - - - 0.000000001098 71.0
DYD3_k127_6917853_0 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.0000000000000000000000000000000002196 150.0
DYD3_k127_6917853_2 Carboxypeptidase regulatory-like domain - - - 0.00001441 56.0
DYD3_k127_6917853_3 receptor - - - 0.0005701 51.0
DYD3_k127_6933287_0 ACT domain - - - 0.0000000000001106 80.0
DYD3_k127_6933287_1 CarboxypepD_reg-like domain - - - 0.00004173 56.0
DYD3_k127_6989711_0 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001106 278.0
DYD3_k127_6989711_1 pfkB family carbohydrate kinase - - - 0.0003875 52.0
DYD3_k127_6989711_2 histidine kinase, dimerisation and phosphoacceptor region - - - 0.0006353 52.0
DYD3_k127_6989802_0 pfam abc K06158 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 331.0
DYD3_k127_6989802_1 Tetratricopeptide repeats - - - 0.00000000000000000000000000000000000000000000000000000002813 218.0
DYD3_k127_6989802_2 Histidine kinase-, DNA gyrase B-, and HSP90-like - - - 0.0000000000000000000000000000000000000000004497 173.0
DYD3_k127_6989802_3 Transcriptional regulator, ArsR family - - - 0.0000000000000000000000003751 115.0
DYD3_k127_6989802_4 Transcriptional regulator K07332 - - 0.000000000002406 75.0
DYD3_k127_702783_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000128 616.0
DYD3_k127_702783_1 TIGRFAM acetyl coenzyme A synthetase (ADP forming), alpha domain K01905,K22224 - 6.2.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004574 603.0
DYD3_k127_702783_2 PAC2 family K06869 - - 0.00000000000000000000000002173 117.0
DYD3_k127_7064959_0 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002118 295.0
DYD3_k127_7064959_1 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000001318 261.0
DYD3_k127_7064959_2 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.00000000000000000000000000006474 116.0
DYD3_k127_7064959_3 histidine kinase A domain protein - - - 0.000000000000000000000001903 107.0
DYD3_k127_7064959_4 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.00002032 48.0
DYD3_k127_7069373_0 His Kinase A (phosphoacceptor) domain K07636 - 2.7.13.3 0.00000000000000000000000000000000000001369 165.0
DYD3_k127_7069373_1 Galactose oxidase, central domain - - - 0.000000000000000000000000000000156 136.0
DYD3_k127_7069373_2 PFAM Major Facilitator Superfamily - - - 0.00000000000000000000000008728 112.0
DYD3_k127_7069373_3 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454 - - 0.0000000000000001225 85.0
DYD3_k127_7069373_4 - - - - 0.000000000001744 72.0
DYD3_k127_7115440_0 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 493.0
DYD3_k127_7115440_1 ABC transporter K09013 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002063 356.0
DYD3_k127_7115440_2 FeS assembly protein SufD K07033,K09015 GO:0006790,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0031163,GO:0044085,GO:0044237,GO:0050896,GO:0051186,GO:0071840 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 361.0
DYD3_k127_7115440_3 SUF system FeS assembly protein, NifU family K04488 - - 0.00000000000000000000000001426 126.0
DYD3_k127_7151939_0 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K19312 GO:0003674,GO:0003824,GO:0004658,GO:0016421,GO:0016874,GO:0016885 2.1.3.15,6.4.1.2,6.4.1.3 6.238e-223 703.0
DYD3_k127_7151939_1 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.0000000000000000000000000001319 127.0
DYD3_k127_7151939_2 HxlR-like helix-turn-helix - - - 0.0000000000000000000000003681 109.0
DYD3_k127_7151939_3 acetyltransferase - - - 0.00000000000000004168 86.0
DYD3_k127_7151939_4 PFAM TonB-dependent receptor plug - - - 0.0000501 55.0
DYD3_k127_7151939_5 - - - - 0.0006768 52.0
DYD3_k127_7164353_0 glutamine synthetase K01915 - 6.3.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000192 492.0
DYD3_k127_7164353_1 Carbon starvation protein K06200 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 486.0
DYD3_k127_7164353_10 SdrD B-like domain - - - 0.0001111 54.0
DYD3_k127_7164353_11 - - - - 0.0004154 50.0
DYD3_k127_7164353_2 DEAD DEAH box helicase domain protein K10896 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000148 370.0
DYD3_k127_7164353_3 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis K04479 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000002793 264.0
DYD3_k127_7164353_4 proline betaine transporter - - - 0.0000000000000000000000000000000004021 135.0
DYD3_k127_7164353_5 transcription regulator activity - - - 0.000000000000000000000000007478 116.0
DYD3_k127_7164353_6 - - - - 0.0000000001481 73.0
DYD3_k127_7164353_7 - - - - 0.000002829 55.0
DYD3_k127_7164353_8 TonB dependent receptor - - - 0.000008368 57.0
DYD3_k127_7164353_9 TM2 domain - - - 0.00002281 51.0
DYD3_k127_7170037_0 Haemolysin-III related K11068 - - 0.000000000000000000000000000000000000008136 158.0
DYD3_k127_7170037_1 response regulator - - - 0.00004647 53.0
DYD3_k127_7195026_0 ABC transporter C-terminal domain K06158 - - 0.0000000000000000000000000000000000000000000000000000002119 208.0
DYD3_k127_7195026_1 Methyltransferase domain - - - 0.0000000000000000000000000000000000000001963 160.0
DYD3_k127_7195026_2 Toxic component of a toxin-antitoxin (TA) module. An RNase K07065 - - 0.000000000000006255 80.0
DYD3_k127_7195026_3 sodium:proton antiporter activity K05564,K11105 - - 0.000000628 56.0
DYD3_k127_7195026_4 - - - - 0.0008138 45.0
DYD3_k127_719866_0 Belongs to the glycosyl hydrolase 5 (cellulase A) family K01179,K19668 GO:0005575,GO:0005576 3.2.1.4,3.2.1.91 0.00001581 57.0
DYD3_k127_7202291_0 Response regulator, receiver K02485 - - 0.00000000000000000000000000001169 124.0
DYD3_k127_7202291_1 - - - - 0.000000000000000000000000003406 127.0
DYD3_k127_7202291_2 zinc ion binding - - - 0.0002198 49.0
DYD3_k127_7210961_0 Methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000003948 233.0
DYD3_k127_7210961_1 Thymidylate kinase K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.00000000000000000000000000000009479 131.0
DYD3_k127_7210961_2 COG1522 Transcriptional regulators K03718 - - 0.00004235 54.0
DYD3_k127_7212732_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003487 493.0
DYD3_k127_7212732_1 dienelactone hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 319.0
DYD3_k127_7212732_2 Specifically catalyzes the N1-methylation of pseudouridine at position 54 (Psi54) in tRNAs K16317 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.257 0.00000000000000000000000000000000004746 141.0
DYD3_k127_72176_0 PFAM tRNA synthetase, class II (G, H, P and S) K01880 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003065 578.0
DYD3_k127_72176_1 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001874 494.0
DYD3_k127_72176_2 Roadblock LC7 family protein K07131 - - 0.0000000000000002752 83.0
DYD3_k127_7224922_0 Heat shock 70 kDa protein K04043 - - 1.948e-216 688.0
DYD3_k127_7224922_1 GTPase of K06942 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 413.0
DYD3_k127_7224922_2 Two component, sigma54 specific, transcriptional regulator, Fis family K07714,K19641 - - 0.0000000000000004449 88.0
DYD3_k127_723303_0 ATPase activity K01990,K19340 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002233 267.0
DYD3_k127_723303_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000043 257.0
DYD3_k127_723303_2 ABC-2 family transporter protein K01992 - - 0.0000000002142 73.0
DYD3_k127_723303_3 glucose sorbosone - - - 0.00000001973 65.0
DYD3_k127_723303_4 Lycopene cyclase protein - - - 0.000000103 64.0
DYD3_k127_723303_6 alpha-amylase K01176 - 3.2.1.1 0.0001992 53.0
DYD3_k127_727830_0 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 313.0
DYD3_k127_727830_1 Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation K03433 - 3.4.25.1 0.00000000000000000000000000000000000000000000000000000001686 205.0
DYD3_k127_727830_2 Protein of unknown function (DUF445) - - - 0.00000000000000000007689 105.0
DYD3_k127_727830_3 protein histidine kinase activity - - - 0.00000000000000000042 96.0
DYD3_k127_727830_4 - - - - 0.00000000001227 70.0
DYD3_k127_727830_5 HxlR family - - - 0.00000003288 61.0
DYD3_k127_727830_6 hydrolase activity, acting on ester bonds - - - 0.0000002872 63.0
DYD3_k127_727830_7 Integral membrane protein TerC family - - - 0.0004119 48.0
DYD3_k127_731890_0 LVIVD repeat - - - 0.00000000000001029 87.0
DYD3_k127_731890_1 PFAM TonB-dependent receptor plug - - - 0.000007826 58.0
DYD3_k127_736283_0 Truncated hemoglobins K06886 - - 0.00000000000000000000000000000000000000000001333 165.0
DYD3_k127_736283_1 Galactose oxidase, central domain - - - 0.00000000000000000000000000000000000000000009662 173.0
DYD3_k127_736283_2 - - - - 0.0000005413 62.0
DYD3_k127_741612_0 Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA K04800 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003084 337.0
DYD3_k127_741612_1 Xylose isomerase-like TIM barrel K01151 - 3.1.21.2 0.0000000000000000000000000000000000000000000000000000000000000000000000002578 260.0
DYD3_k127_741612_2 PFAM Sugar isomerase (SIS) K08094 - 5.3.1.27 0.00000000000000000000000000000000000001913 161.0
DYD3_k127_741612_3 Transglutaminase-like superfamily - - - 0.000002459 61.0
DYD3_k127_741612_4 Cellulase (glycosyl hydrolase family 5) K01218 - 3.2.1.78 0.0004741 53.0
DYD3_k127_762618_0 benzoyl-CoA oxygenase K15512 - 1.14.13.208 0.000000000000000000000000000000000000000000000000000000000003435 222.0
DYD3_k127_762618_1 PFAM SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000000000525 200.0
DYD3_k127_774397_0 Winged helix-turn-helix DNA-binding - - - 0.000000000000001619 88.0
DYD3_k127_774397_1 - - - - 0.0000008654 61.0
DYD3_k127_774397_2 CarboxypepD_reg-like domain - - - 0.0003578 52.0
DYD3_k127_792177_0 N-methylhydantoinase B acetone carboxylase, alpha subunit K01474 - 3.5.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007575 497.0
DYD3_k127_792177_1 COG0145 N-methylhydantoinase A acetone carboxylase, beta subunit K01473 - 3.5.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 476.0
DYD3_k127_792177_2 Natural resistance-associated macrophage protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003491 282.0
DYD3_k127_792177_3 TIGRFAM TonB-dependent siderophore receptor K02014 - - 0.000009358 57.0
DYD3_k127_796852_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01887 - 6.1.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002859 484.0
DYD3_k127_796852_1 Component of the wyosine derivatives biosynthesis pathway that catalyzes the condensation of N-methylguanine with 2 carbon atoms from pyruvate to form the tricyclic 4-demethylwyosine (imG-14) on guanosine-37 of tRNA(Phe) K15449 - 4.1.3.44 0.00000000000000000000000000000000000000000000000000000000000000000000003307 250.0
DYD3_k127_796852_2 Transcriptional regulator, ArsR family - - - 0.0000000000119 76.0
DYD3_k127_796852_3 Copper binding proteins, plastocyanin/azurin family - - - 0.000000009872 66.0
DYD3_k127_799241_0 PFAM SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006407 321.0
DYD3_k127_799241_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009685 301.0
DYD3_k127_820464_0 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006619 277.0
DYD3_k127_820464_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000001467 171.0
DYD3_k127_820464_2 Carboxypeptidase regulatory-like domain - - - 0.000005479 58.0
DYD3_k127_826963_0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 - 1.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 381.0
DYD3_k127_826963_1 Belongs to the arginase family K01476 - 3.5.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000302 341.0
DYD3_k127_826963_2 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003497 251.0
DYD3_k127_826963_3 signal transduction histidine kinase - - - 0.000000000000000000000000000000000000000000000000001067 199.0
DYD3_k127_826963_4 Diacylglycerol kinase - - - 0.000000000000000000000000000000000000000000000000005946 188.0
DYD3_k127_826963_5 COG0328 Ribonuclease HI K03469 - 3.1.26.4 0.0000000000000000000000000001193 129.0
DYD3_k127_826963_6 Tonb-dependent siderophore receptor K02014 - - 0.000000002042 68.0
DYD3_k127_826963_7 peptidase U32 - - - 0.000001141 55.0
DYD3_k127_826963_8 LVIVD repeat-containing protein - - - 0.000001348 61.0
DYD3_k127_826963_9 Domain of unknown function (DUF4382) - - - 0.000946 51.0
DYD3_k127_83698_0 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003853 397.0
DYD3_k127_83698_1 Sarcosine oxidase K00303 - 1.5.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001602 362.0
DYD3_k127_83698_2 2Fe-2S iron-sulfur cluster binding domain K00302 - 1.5.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000009696 269.0
DYD3_k127_83698_3 BFD-like [2Fe-2S] binding domain - - - 0.0000000000000000000000015 106.0
DYD3_k127_83698_4 protein conserved in archaea - - - 0.0000000000001944 81.0
DYD3_k127_83698_5 LVIVD repeat - - - 0.0000003138 64.0
DYD3_k127_83698_6 Zinc metalloprotease (Elastase) - - - 0.0000006213 62.0
DYD3_k127_83698_7 TonB-dependent receptor - - - 0.000005917 57.0
DYD3_k127_83698_8 TIGRFAM TonB-dependent siderophore receptor K02014 - - 0.0001828 53.0
DYD3_k127_83698_9 LVIVD repeat - - - 0.0002489 54.0
DYD3_k127_853091_0 Threonine synthase K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000004253 166.0
DYD3_k127_853091_1 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.0000000000000000000000000000000000001279 153.0
DYD3_k127_853091_2 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family - - - 0.000000000000005866 89.0
DYD3_k127_853091_3 Glyoxalase-like domain K01759,K01849,K05606 - 4.4.1.5,5.1.99.1,5.4.99.2 0.00000000000001863 74.0
DYD3_k127_853091_4 - - - - 0.0000000003398 72.0
DYD3_k127_855476_0 NADPH quinone reductase K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006435 341.0
DYD3_k127_855476_1 peroxiredoxin activity K03564 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000001096 204.0
DYD3_k127_855476_2 OsmC-like protein K04063 GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006970,GO:0006972,GO:0006979,GO:0008150,GO:0008152,GO:0009628,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016684,GO:0033194,GO:0042221,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0051920,GO:0055114,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1901700,GO:1990748 - 0.000000000000000000000000000000000000000000001923 169.0
DYD3_k127_855476_3 DSBA-like thioredoxin domain - - - 0.0000000000000000000000000000000000000000001563 169.0
DYD3_k127_855476_4 Ion transporter K10716 - - 0.00000000000000000003544 100.0
DYD3_k127_855476_5 Acetyltransferase (GNAT) domain - - - 0.000004248 56.0
DYD3_k127_858620_0 metal-dependent hydrolase with the TIM-barrel fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003451 280.0
DYD3_k127_858620_1 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.000000000000000000000000000000000000000000004535 171.0
DYD3_k127_858620_2 - - - - 0.000000000000000000000000000000000000000000004835 181.0
DYD3_k127_868894_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000005533 221.0
DYD3_k127_868894_1 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.00000000000000000000000000000000000000000000001469 192.0
DYD3_k127_868894_2 Glycosyltransferase - - - 0.0000000000000000000000000000000003076 139.0
DYD3_k127_868894_3 BNR repeat-like domain - - - 0.0000000000000000000000000005228 129.0
DYD3_k127_868894_4 Carboxypeptidase regulatory-like domain - - - 0.00008502 54.0
DYD3_k127_891695_0 Glucose sorbosone - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006963 398.0
DYD3_k127_891695_1 PFAM FAD dependent oxidoreductase K00111 - 1.1.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004179 405.0
DYD3_k127_895789_0 Glycosyl hydrolase family 26 K01179 GO:0003674,GO:0003824,GO:0004553,GO:0008810,GO:0016787,GO:0016798 3.2.1.4 0.000000000000000000000000000000021 143.0
DYD3_k127_895789_1 CDP-alcohol phosphatidyltransferase K07281,K07291 - 2.7.7.74,2.7.8.34 0.0000000001044 72.0
DYD3_k127_912801_0 Quinolinate synthetase A protein K03517 - 2.5.1.72 0.00000000000000000000000000000000000000000000000000000000000001067 243.0
DYD3_k127_912801_1 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.0000000000000000000000000000000000000003417 157.0
DYD3_k127_912801_2 cellulose binding - - - 0.00003737 56.0
DYD3_k127_919931_0 acetylornithine and succinylornithine aminotransferase K00821,K05830 - 2.6.1.11,2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002879 378.0
DYD3_k127_919931_1 Catalyzes the release of L-lysine from LysW -gamma-L- lysine K05831 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005619 274.0
DYD3_k127_925762_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit K02117 - 3.6.3.14,3.6.3.15 1.025e-277 869.0
DYD3_k127_925762_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit K02118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001986 345.0
DYD3_k127_925762_2 Produces ATP from ADP in the presence of a proton gradient across the membrane K02119 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001222 264.0
DYD3_k127_925762_3 Belongs to the V-ATPase 116 kDa subunit family K02123 - - 0.0000000000000000000000000000000000000000000000000000000000000008368 233.0
DYD3_k127_925762_4 Produces ATP from ADP in the presence of a proton gradient across the membrane K02122 - - 0.0000000000000000000000000189 111.0
DYD3_k127_925762_5 ATP synthase subunit C K02124 - - 0.0000000000000000005671 101.0
DYD3_k127_925762_6 Produces ATP from ADP in the presence of a proton gradient across the membrane K02121 - - 0.00000000005876 71.0
DYD3_k127_933985_0 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000225 311.0
DYD3_k127_933985_1 PFAM TonB-dependent Receptor Plug - - - 0.0000009202 58.0
DYD3_k127_933985_2 TonB-dependent receptor K02014 - - 0.0002084 52.0
DYD3_k127_936110_0 His Kinase A (phosphoacceptor - - - 0.0000000000000000000000000000000000000000000000000000000001136 222.0
DYD3_k127_936110_1 Cell wall-active antibiotics response 4TMS YvqF - - - 0.0000000000000000000000000000000000000003116 158.0
DYD3_k127_936110_2 - - - - 0.00009113 54.0
DYD3_k127_94332_0 Possesses two activities a DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3' to 5' direction. Has a template-primer preference which is characteristic of a replicative DNA polymerase K02323 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001896 347.0
DYD3_k127_94332_1 Ion transport protein K10716 - - 0.000000000000000000000000000008086 129.0
DYD3_k127_94332_2 - - - - 0.000000000000000000000000157 116.0
DYD3_k127_94332_3 COG0681 Signal peptidase I K13280 - 3.4.21.89 0.000000000000001798 90.0
DYD3_k127_94332_4 - - - - 0.00000000000326 79.0
DYD3_k127_94332_5 FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02416 - - 0.0000000001058 63.0
DYD3_k127_947176_0 Belongs to the GARS family K01945 - 6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001675 387.0
DYD3_k127_947176_1 Peptidase family M1 domain K01256 - 3.4.11.2 0.0000000000000000000000000003172 126.0
DYD3_k127_947176_2 PAC2 family K06869 - - 0.0000000000000716 81.0
DYD3_k127_947176_3 PFAM blue (type 1) copper domain protein K00368 - 1.7.2.1 0.00000000001153 70.0
DYD3_k127_955930_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00266 - 1.4.1.13,1.4.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001572 379.0
DYD3_k127_955930_1 4Fe-4S single cluster domain K07129 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004216 313.0
DYD3_k127_955930_10 PFAM PKD domain containing protein - - - 0.00000000000326 79.0
DYD3_k127_955930_11 TonB-dependent receptor K02014 - - 0.0004987 51.0
DYD3_k127_955930_2 Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication K04802 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006272,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0022616,GO:0030234,GO:0030337,GO:0032991,GO:0034641,GO:0034645,GO:0042802,GO:0043170,GO:0043626,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0044796,GO:0046483,GO:0050790,GO:0065007,GO:0065009,GO:0071704,GO:0090304,GO:0098772,GO:1901360,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000002156 250.0
DYD3_k127_955930_3 Carbon-nitrogen hydrolase K18540 - 3.5.1.100 0.0000000000000000000000000000000000000000000000000000002456 205.0
DYD3_k127_955930_4 PFAM Uncharacterised ACR, YagE family COG1723 - - - 0.00000000000000000000000000000000000000000000000001181 194.0
DYD3_k127_955930_5 Diphthamide synthase K06927 - 6.3.1.14 0.00000000000000000000000000000000000000000000007377 176.0
DYD3_k127_955930_6 transcription regulator activity - - - 0.0000000000000000000000000000000000000004776 153.0
DYD3_k127_955930_7 Bacterial regulatory helix-turn-helix protein, lysR family K03574 - 3.6.1.55 0.000000000000000000000000000000000000443 149.0
DYD3_k127_955930_8 Belongs to the archaeal rpoM eukaryotic RPA12 RPB9 RPC11 RNA polymerase family K03057 GO:0003674,GO:0005488,GO:0006355,GO:0008150,GO:0008270,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0043167,GO:0043169,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000000006549 89.0
DYD3_k127_955930_9 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source K01916 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008795,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016874,GO:0016879,GO:0016880,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.1.5 0.000000000000001286 81.0
DYD3_k127_956350_0 Major Facilitator Superfamily - - - 0.0000000000000000000000000000007205 135.0
DYD3_k127_956350_1 transmembrane transport - - - 0.00000000002461 70.0
DYD3_k127_956350_2 Haloacid dehalogenase - - - 0.0000001336 62.0
DYD3_k127_95703_0 TrkA-C domain K03455 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005743 387.0
DYD3_k127_978755_0 PFAM short-chain dehydrogenase reductase SDR K15314 - - 1.535e-198 640.0
DYD3_k127_991196_0 Proton-conducting membrane transporter K05565,K12137 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000024 512.0
DYD3_k127_991196_1 COG1008 NADH ubiquinone oxidoreductase subunit 4 (chain M) K00342,K22168 - 1.5.98.3,1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 372.0
DYD3_k127_991196_2 NADH dehydrogenase K00337 GO:0003674,GO:0003824,GO:0003954,GO:0008137,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000663 293.0
DYD3_k127_991196_3 Proton-conducting membrane transporter K22169 - 1.5.98.3 0.0000000000000000000000000000000000000000000001585 178.0
DYD3_k127_991196_4 4Fe-4S dicluster domain K00338 - 1.6.5.3 0.000000000000000000000000002619 119.0
DYD3_k127_991196_5 NADH ubiquinone oxidoreductase subunit 11 or 4L (Chain K) K00340 - 1.6.5.3 0.0000000000000000001513 96.0
DYD3_k127_991196_6 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339,K05578 - 1.6.5.3 0.0000001081 63.0
DYD3_k127_991196_7 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339,K05578 - 1.6.5.3 0.0000352 53.0