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Overview

ID MAG00954
Name DYD3_bin.23
Sample SMP0027
Taxonomy
Kingdom Bacteria
Phylum Myxococcota
Class Polyangia
Order Polyangiales
Family Polyangiaceae
Genus PMG-095
Species
Assembly information
Completeness (%) 88.91
Contamination (%) 0.94
GC content (%) 68.0
N50 (bp) 20,617
Genome size (bp) 6,276,166

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes4410

Gene name Description KEGG GOs EC E-value Score Sequence
DYD3_k127_1026951_0 Family membership K08884 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001677 375.0
DYD3_k127_1026951_1 Fatty acid hydroxylase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009047 314.0
DYD3_k127_1026951_2 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000003223 230.0
DYD3_k127_1026951_3 Glycosyl hydrolase family 30 beta sandwich domain K15924 - 3.2.1.136 0.00000000000000000004353 106.0
DYD3_k127_1034696_0 AcrB/AcrD/AcrF family K03296,K18138 - - 0.0 1364.0
DYD3_k127_1034696_1 PFAM Protein kinase domain - - - 0.0 1254.0
DYD3_k127_1034696_10 N-succinyltransferase beta subunit K00673 - 2.3.1.109 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 402.0
DYD3_k127_1034696_11 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002452 363.0
DYD3_k127_1034696_12 DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001721 350.0
DYD3_k127_1034696_13 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 344.0
DYD3_k127_1034696_14 PFAM Aminotransferase class I and II K14261 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003422 340.0
DYD3_k127_1034696_15 Sodium/hydrogen exchanger family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003109 323.0
DYD3_k127_1034696_16 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002205 313.0
DYD3_k127_1034696_17 phosphorelay signal transduction system K02282,K20971 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001776 290.0
DYD3_k127_1034696_18 sodium:proton antiporter activity K06382 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001355 291.0
DYD3_k127_1034696_19 Methane/Phenol/Toluene Hydroxylase K15764 - 1.14.13.236 0.0000000000000000000000000000000000000000000000000000008471 208.0
DYD3_k127_1034696_2 COG0454 Histone acetyltransferase HPA2 and related - - - 5.686e-216 686.0
DYD3_k127_1034696_20 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000001313 191.0
DYD3_k127_1034696_21 alpha-L-arabinofuranosidase K01209 - 3.2.1.55 0.000000000000000000000000000000000000000000000009756 194.0
DYD3_k127_1034696_23 Forkhead associated domain - - - 0.000000000000000000000000000000000000000003609 171.0
DYD3_k127_1034696_25 Peptidase M16 - - - 0.00000000000000000000000000003545 132.0
DYD3_k127_1034696_27 Heme copper-type cytochrome quinol oxidase, subunit K02276 - 1.9.3.1 0.0000000000000000000000000002861 125.0
DYD3_k127_1034696_28 Cytochrome c554 and c-prime - - - 0.00000000000000000000000001787 128.0
DYD3_k127_1034696_29 Insulinase (Peptidase family M16) - - - 0.00000000000000000001635 106.0
DYD3_k127_1034696_3 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000463 615.0
DYD3_k127_1034696_30 Stress responsive A/B Barrel Domain - - - 0.0000000000000000001167 92.0
DYD3_k127_1034696_31 nitrite reductase [NAD(P)H] activity K15762 - - 0.0000000000000000002199 95.0
DYD3_k127_1034696_32 MmoB/DmpM family - - - 0.0000000000042 76.0
DYD3_k127_1034696_4 ABC-type transport system involved in lipoprotein release permease component K09808 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 582.0
DYD3_k127_1034696_5 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002473 461.0
DYD3_k127_1034696_6 Cytochrome C oxidase, cbb3-type, subunit III K00368 - 1.7.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004324 465.0
DYD3_k127_1034696_7 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002768 439.0
DYD3_k127_1034696_8 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003798 410.0
DYD3_k127_1034696_9 PFAM Methane phenol toluene hydroxylase K15760 - 1.14.13.236 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007552 419.0
DYD3_k127_1048845_0 Peptidase family M1 domain K01256 - 3.4.11.2 1.899e-270 858.0
DYD3_k127_1048845_1 Belongs to the ompA family - - - 8.982e-246 777.0
DYD3_k127_1048845_11 Sterol carrier protein domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004561 301.0
DYD3_k127_1048845_12 Histidine kinase-like ATPases - - - 0.00000000000000000000000000000000000000000000000000000000000000001541 238.0
DYD3_k127_1048845_13 phosphatase - - - 0.000000000000000000000000000000000000000000000000000005134 211.0
DYD3_k127_1048845_14 zinc-ribbon domain - - - 0.0000000000000000000000000000000000000000000006674 186.0
DYD3_k127_1048845_16 Cys/Met metabolism PLP-dependent enzyme K01739 - 2.5.1.48 0.0000000000000000000000003544 106.0
DYD3_k127_1048845_17 response regulator - - - 0.00000000000000000001062 108.0
DYD3_k127_1048845_2 DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity K03581 - 3.1.11.5 5.121e-242 769.0
DYD3_k127_1048845_3 ThiF family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004159 578.0
DYD3_k127_1048845_4 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001836 439.0
DYD3_k127_1048845_5 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002582 432.0
DYD3_k127_1048845_6 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 408.0
DYD3_k127_1048845_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005162 389.0
DYD3_k127_1048845_8 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000238 356.0
DYD3_k127_1048845_9 ATPases associated with a variety of cellular activities K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001848 315.0
DYD3_k127_1065829_0 glycosyl transferase family 2 K00721 - 2.4.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000475 500.0
DYD3_k127_1065829_1 Glycosyl transferase family 2 K20534 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004457 368.0
DYD3_k127_1065829_10 extracellular polysaccharide biosynthetic process - - - 0.0000000005131 65.0
DYD3_k127_1065829_2 GMC oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004147 357.0
DYD3_k127_1065829_3 -O-antigen K02847,K13009 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003889 281.0
DYD3_k127_1065829_4 Glycosyl transferase, family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000001716 241.0
DYD3_k127_1065829_5 O-acyltransferase activity K00661 - 2.3.1.79 0.000000000000000000000000000000000000000000000000000000000000001427 222.0
DYD3_k127_1065829_6 - - - - 0.00000000000000000000000000000000000000000000006199 192.0
DYD3_k127_1065829_7 Male sterility protein - - - 0.000000000000000000000001171 119.0
DYD3_k127_1065829_8 NmrA-like family K00329,K00356 - 1.6.5.3,1.6.99.3 0.000000000000000000000003937 113.0
DYD3_k127_1065829_9 GtrA-like protein - - - 0.000000000000000004608 92.0
DYD3_k127_1067903_0 PFAM Protein kinase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004226 431.0
DYD3_k127_1067903_1 Protein involved in biosynthesis of mitomycin antibiotics polyketide fumonisin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004967 294.0
DYD3_k127_1067903_2 cellulase activity K01183 - 3.2.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000007065 289.0
DYD3_k127_1067903_3 sequence-specific DNA binding K02099,K13529,K15051 - 3.2.2.21 0.00000000000216 79.0
DYD3_k127_1067903_4 diguanylate cyclase - - - 0.0001605 53.0
DYD3_k127_1067903_5 Cytochrome C oxidase, cbb3-type, subunit III K08738 - - 0.000752 48.0
DYD3_k127_1079594_0 Melibiase K07407 - 3.2.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001872 418.0
DYD3_k127_1079594_1 long-chain fatty acid transporting porin activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009588 375.0
DYD3_k127_1079594_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000001913 95.0
DYD3_k127_1079594_3 Dehydrogenase - - - 0.000002335 49.0
DYD3_k127_1079594_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000008213 55.0
DYD3_k127_1079594_5 FecR protein K07165 - - 0.0007001 52.0
DYD3_k127_1092435_0 GHMP kinases C terminal K07031 - 2.7.1.168 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004108 451.0
DYD3_k127_1092435_1 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0000000000000007605 91.0
DYD3_k127_1092435_2 transferase activity, transferring glycosyl groups - - - 0.000003771 58.0
DYD3_k127_110813_0 B12 binding domain - - - 1.574e-222 699.0
DYD3_k127_110813_1 TonB dependent receptor K02014,K16092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001937 464.0
DYD3_k127_110813_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002251 309.0
DYD3_k127_110813_3 PA14 domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000161 258.0
DYD3_k127_110813_4 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000002594 230.0
DYD3_k127_110813_5 Domain of unknown function (DUF4465) - - - 0.000000000000000000000000000000000000000000000000000000006783 214.0
DYD3_k127_110813_6 Iron-containing redox enzyme - - - 0.00000000000000000000000000000000003071 147.0
DYD3_k127_110813_7 helix-turn-helix- domain containing protein AraC type - - - 0.000000000001159 81.0
DYD3_k127_110968_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1120.0
DYD3_k127_110968_1 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 530.0
DYD3_k127_110968_10 Biotin-requiring enzyme K02160 - - 0.0000000000000000268 85.0
DYD3_k127_110968_12 Secretory protein of YscJ/FliF family K03222 - - 0.00000000007142 71.0
DYD3_k127_110968_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 477.0
DYD3_k127_110968_3 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003638 396.0
DYD3_k127_110968_4 MlaD protein K02067 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003151 323.0
DYD3_k127_110968_5 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005411 303.0
DYD3_k127_110968_6 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.000000000000000000000000000000000000000000000000000005638 203.0
DYD3_k127_110968_7 - - - - 0.000000000000000000000000000000000000000005307 164.0
DYD3_k127_110968_9 cheY-homologous receiver domain - - - 0.00000000000000000000003306 104.0
DYD3_k127_1116196_0 TIGRFAM urea ABC transporter, urea binding protein K11959 - - 4.468e-224 704.0
DYD3_k127_1116196_1 ABC transporter K02056 - 3.6.3.17 1.418e-194 630.0
DYD3_k127_1116196_10 Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG K03189 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 325.0
DYD3_k127_1116196_11 ABC transporter ATP-binding protein K11963 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002381 306.0
DYD3_k127_1116196_12 ChrR Cupin-like domain - - - 0.0000000000000000000000000007918 122.0
DYD3_k127_1116196_13 Required for maturation of urease via the functional incorporation of the urease nickel metallocenter K03188 - - 0.00004337 46.0
DYD3_k127_1116196_2 ABC transporter substrate-binding protein PnrA-like K02058,K07335 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005909 535.0
DYD3_k127_1116196_3 Branched-chain amino acid transport system / permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003756 538.0
DYD3_k127_1116196_4 branched-chain amino acid transport system, permease component K11961 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 509.0
DYD3_k127_1116196_5 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003827 486.0
DYD3_k127_1116196_6 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006879 443.0
DYD3_k127_1116196_7 Isochorismatase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003467 368.0
DYD3_k127_1116196_8 Branched-chain amino acid ATP-binding cassette transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008838 340.0
DYD3_k127_1116196_9 Isochorismatase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000688 330.0
DYD3_k127_1207247_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003164 314.0
DYD3_k127_1207247_1 - - - - 0.000000000000000000000000000000000000000000001692 173.0
DYD3_k127_1207247_2 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.000000000000000000000000000000000000000000003658 165.0
DYD3_k127_1207247_3 - - - - 0.000000000000000000000000000000000007071 146.0
DYD3_k127_1207247_4 Transcriptional regulator K02529 - - 0.000000000000000000000001478 118.0
DYD3_k127_1226192_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1095.0
DYD3_k127_1226192_1 Peptidase, M16 - - - 0.00000000000000000000000000000000002037 154.0
DYD3_k127_1226192_2 Belongs to the peptidase M16 family K07263 - - 0.000000000000001979 81.0
DYD3_k127_1235680_0 Heat shock 70 kDa protein K04043 - - 2.699e-227 719.0
DYD3_k127_1235680_1 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003343 598.0
DYD3_k127_1235680_2 Belongs to the glycosyl hydrolase 26 family K01218 - 3.2.1.78 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004199 381.0
DYD3_k127_1235680_3 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 334.0
DYD3_k127_1235680_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000002045 245.0
DYD3_k127_1235680_5 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000003707 194.0
DYD3_k127_1235680_6 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0044424,GO:0044444,GO:0044464,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000001721 185.0
DYD3_k127_1235680_7 PFAM glycoside hydrolase family 10 - - - 0.0000000002455 74.0
DYD3_k127_1253294_0 Belongs to the serpin family K13963 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004026 284.0
DYD3_k127_1253294_1 - - - - 0.00000000000000000000000000000000000000000004384 169.0
DYD3_k127_1253294_2 Putative restriction endonuclease - - - 0.0000000000000000000000000000000003032 139.0
DYD3_k127_1253294_3 Pyruvate phosphate dikinase, PEP K01006,K01007 - 2.7.9.1,2.7.9.2 0.0000000000000002649 83.0
DYD3_k127_1253294_5 Helix-turn-helix XRE-family like proteins K21498 - - 0.000000000005988 67.0
DYD3_k127_1253294_6 Alpha beta hydrolase K01563,K22318 - 3.8.1.5 0.0000000003012 68.0
DYD3_k127_1253294_7 PFAM ROK family - - - 0.0005673 46.0
DYD3_k127_1297692_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585,K07799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003411 332.0
DYD3_k127_1297692_1 Serine Threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006294 324.0
DYD3_k127_1297692_2 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002029 242.0
DYD3_k127_1297692_3 DNA integration - - - 0.00000000000000000000000009317 117.0
DYD3_k127_129822_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007047 381.0
DYD3_k127_129822_1 C-terminal domain of 1-Cys peroxiredoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001559 258.0
DYD3_k127_129822_2 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000002015 261.0
DYD3_k127_129822_3 general stress protein 26 - - - 0.00000000000000000000000000000000002609 142.0
DYD3_k127_129822_4 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.00000000000000000000005125 102.0
DYD3_k127_129822_5 Domain of unknown function (DUF4440) - - - 0.00000001144 62.0
DYD3_k127_129822_6 zinc-ribbon domain - - - 0.00000003327 64.0
DYD3_k127_129822_7 - - - - 0.00000003742 61.0
DYD3_k127_129822_8 BON domain - - - 0.00000005669 59.0
DYD3_k127_129822_9 Extensin-like protein C-terminus - - - 0.00000009628 63.0
DYD3_k127_1303079_0 von Willebrand factor, type A K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000001217 254.0
DYD3_k127_1303079_1 Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress - - - 0.0000000000000000001196 98.0
DYD3_k127_1303079_2 Transposase - - - 0.0000002078 56.0
DYD3_k127_1303079_3 Auxin Efflux Carrier K07088 - - 0.00001629 48.0
DYD3_k127_1303079_4 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.00003602 48.0
DYD3_k127_1339877_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 1.243e-263 834.0
DYD3_k127_1339877_1 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 2.572e-252 796.0
DYD3_k127_1339877_2 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001695 382.0
DYD3_k127_1339877_3 peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004366 300.0
DYD3_k127_1339877_4 Domain of unknown function (DUF4215) - - - 0.00000000000000000000000007925 108.0
DYD3_k127_1339877_5 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000003531 123.0
DYD3_k127_1339877_6 Arylsulfotransferase (ASST) - - - 0.0001457 54.0
DYD3_k127_1361760_0 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004148 430.0
DYD3_k127_1361760_1 Belongs to the ABC transporter superfamily K02032,K10823 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002746 319.0
DYD3_k127_1361760_2 Protein of unknown function (DUF423) - - - 0.000000000000000000000000000000000000699 142.0
DYD3_k127_1372695_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1329.0
DYD3_k127_1372695_1 repeat protein - - - 0.0 1184.0
DYD3_k127_1372695_2 Ami_3 K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 396.0
DYD3_k127_1372695_3 Forkhead associated domain - - - 0.00000000000000000000000000000000000000000000000000000000000000002142 244.0
DYD3_k127_1372695_4 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.000000000000000000000000000000000000000000000000000002051 194.0
DYD3_k127_1372695_5 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000004615 158.0
DYD3_k127_1373767_0 Zn-dependent proteases and their inactivated homologs K03592 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002456 548.0
DYD3_k127_1373767_1 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007755 437.0
DYD3_k127_1373767_11 FHA domain - - - 0.000000000000000000000000000000006791 147.0
DYD3_k127_1373767_12 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K15396 - 2.1.1.200 0.0000000000000000000000000000002612 130.0
DYD3_k127_1373767_14 Serine/threonine phosphatases, family 2C, catalytic domain - - - 0.000065 56.0
DYD3_k127_1373767_2 Belongs to the LarC family K09121 - 4.99.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002185 444.0
DYD3_k127_1373767_3 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001971 316.0
DYD3_k127_1373767_4 belongs to the thioredoxin family K03671,K05838,K07390,K11717 - 2.8.1.7,4.4.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008217 292.0
DYD3_k127_1373767_5 Sulfatase-modifying factor enzyme 1 - - - 0.000000000000000000000000000000000000000000000000000000000000007807 237.0
DYD3_k127_1373767_6 - - - - 0.000000000000000000000000000000000000000000000000000000000008711 225.0
DYD3_k127_1373767_7 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000001561 189.0
DYD3_k127_1373767_9 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033,K13890 - - 0.0000000000000000000000000000000000003028 161.0
DYD3_k127_1380955_0 Alpha-tubulin suppressor and related RCC1 domain-containing - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001582 356.0
DYD3_k127_1380955_1 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 340.0
DYD3_k127_1380955_2 Clp protease - - - 0.00000000000000000000000000000000000000000000000000000000000000000006169 241.0
DYD3_k127_1380955_3 protein trimerization - - - 0.0000005163 55.0
DYD3_k127_1384634_0 Domain of unknown function (DUF4398) - - - 0.000000000000000000000000000000000000000000000000000000002312 212.0
DYD3_k127_1384634_1 Protein conserved in bacteria - - - 0.00000000000000000000000000000000008977 154.0
DYD3_k127_1384634_2 CsbD-like - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000007953 98.0
DYD3_k127_1384634_3 Putative zinc-binding metallo-peptidase - - - 0.00000000000000001039 87.0
DYD3_k127_1384634_4 Domain of unknown function (DUF4398) - - - 0.0000000000000025 82.0
DYD3_k127_1384634_5 Protein of unknown function (DUF1328) - - - 0.0000000001325 70.0
DYD3_k127_139846_0 SMART Elongator protein 3 MiaB NifB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005333 426.0
DYD3_k127_139846_1 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001593 326.0
DYD3_k127_139846_2 acyl-coa-binding protein - - - 0.00000000000000000000000000002542 119.0
DYD3_k127_139846_3 Arylsulfotransferase (ASST) - - - 0.00000002013 67.0
DYD3_k127_1406899_0 Glycosyl hydrolases family 2 - - - 3.972e-288 918.0
DYD3_k127_1406899_1 Carboxyl transferase domain - - - 3.979e-238 745.0
DYD3_k127_1406899_2 Subtilase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002462 543.0
DYD3_k127_1406899_4 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.0000000000000000000000000000000000000000000158 175.0
DYD3_k127_1406899_5 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.00000000000000000000000000000000001704 137.0
DYD3_k127_1406899_7 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000002269 124.0
DYD3_k127_1406899_8 AraC family transcriptional regulator - - - 0.00000000000007944 84.0
DYD3_k127_141100_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.0 1019.0
DYD3_k127_141100_1 Deoxyhypusine synthase K00809 - 2.5.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002603 583.0
DYD3_k127_141100_10 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000000000000001643 186.0
DYD3_k127_141100_11 phosphoglycolate phosphatase activity - - - 0.00000000000000000000000000000000000002698 147.0
DYD3_k127_141100_12 PFAM Glyoxalase bleomycin resistance protein dioxygenase K04750 - - 0.0000000000000000000000000000000004291 138.0
DYD3_k127_141100_14 endocytosis K14611,K20049 - - 0.00000000000000009724 90.0
DYD3_k127_141100_15 DNA-templated transcription, initiation K03088 - - 0.000003354 55.0
DYD3_k127_141100_16 Belongs to the glycosyl hydrolase 1 family K05350 - 3.2.1.21 0.00009374 51.0
DYD3_k127_141100_2 Aldolase K11645 - 4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009495 550.0
DYD3_k127_141100_3 Spermine/spermidine synthase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002538 579.0
DYD3_k127_141100_4 Type II restriction enzyme, methylase subunits - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 434.0
DYD3_k127_141100_5 Metal binding domain of Ada K00567,K10778 - 2.1.1.63 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002511 295.0
DYD3_k127_141100_6 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000001679 228.0
DYD3_k127_141100_7 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000000000000000000000000000000000003149 229.0
DYD3_k127_141100_8 LysM domain protein K07261 - - 0.000000000000000000000000000000000000000000000000000002601 203.0
DYD3_k127_141100_9 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.0000000000000000000000000000000000000000000000001378 185.0
DYD3_k127_1433167_0 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 - 1.17.4.1 0.0 1330.0
DYD3_k127_1433167_1 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 0.0 1024.0
DYD3_k127_1433167_10 Acyl-protein synthetase, LuxE - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001133 283.0
DYD3_k127_1433167_11 Imelysin - - - 0.00000000000000000000000000000000000000000000000000000000000000038 225.0
DYD3_k127_1433167_13 Acid phosphatase homologues K19302 - 3.6.1.27 0.000000000000000000000000000000000000000000001594 179.0
DYD3_k127_1433167_14 protein kinase activity - - - 0.0000000000000000000000000000000000000003729 169.0
DYD3_k127_1433167_15 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000004513 131.0
DYD3_k127_1433167_2 TonB dependent receptor K16091 - - 2.066e-284 893.0
DYD3_k127_1433167_3 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 7.525e-227 718.0
DYD3_k127_1433167_4 Horizontally Transferred TransMembrane Domain - - - 9.634e-196 621.0
DYD3_k127_1433167_5 NMT1/THI5 like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 600.0
DYD3_k127_1433167_6 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00526 - 1.17.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 572.0
DYD3_k127_1433167_7 LysR substrate binding domain K03576 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 442.0
DYD3_k127_1433167_8 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002317 414.0
DYD3_k127_1433167_9 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823,K07250 - 2.6.1.19,2.6.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 378.0
DYD3_k127_1450695_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 531.0
DYD3_k127_1450695_1 Fatty acid desaturase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006211 452.0
DYD3_k127_1450695_11 - - - - 0.000000000000000000007847 97.0
DYD3_k127_1450695_12 - - - - 0.000000000025 74.0
DYD3_k127_1450695_2 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005899 361.0
DYD3_k127_1450695_3 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005553 312.0
DYD3_k127_1450695_4 AAA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 312.0
DYD3_k127_1450695_5 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003001 280.0
DYD3_k127_1450695_6 PFAM PHP domain protein K01104 - 3.1.3.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000001855 270.0
DYD3_k127_1450695_7 long-chain fatty acid transport protein K06076 - - 0.0000000000000000000000000000000000000000000000000000000000000000003468 246.0
DYD3_k127_1450695_8 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000003531 235.0
DYD3_k127_1450695_9 PilZ domain - - - 0.0000000000000000000000000000000000000000000001021 171.0
DYD3_k127_1459819_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 1.978e-263 820.0
DYD3_k127_1459819_1 ATP synthase K02115 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000769 422.0
DYD3_k127_1459819_2 3-dehydroquinate synthase K01735 - 4.2.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006726 411.0
DYD3_k127_1459819_3 Xylose isomerase domain protein TIM barrel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004722 380.0
DYD3_k127_1459819_4 ATP synthase F(0) sector subunit b K02109 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001309 331.0
DYD3_k127_1459819_5 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001798 261.0
DYD3_k127_1459819_6 UbiA prenyltransferase family K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000445 229.0
DYD3_k127_1459819_7 GAF domain - - - 0.000000000000000000000000000000000000000000001289 170.0
DYD3_k127_1459819_8 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.000000000000000000000000000000000000000001067 158.0
DYD3_k127_1459819_9 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000001543 62.0
DYD3_k127_146248_0 Domain of unknown function (DUF2088) - - - 7.805e-246 769.0
DYD3_k127_146248_1 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000631 555.0
DYD3_k127_146248_2 Deoxyhypusine synthase K00809 - 2.5.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005479 437.0
DYD3_k127_146248_3 Periplasmic protein TonB links inner and outer membranes - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 382.0
DYD3_k127_146248_4 haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005438 289.0
DYD3_k127_146248_5 Male sterility protein K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000665 229.0
DYD3_k127_146248_7 protein affecting Mg2 Co2 transport K06195 - - 0.00000000000000000000000000000000000003398 146.0
DYD3_k127_1506656_0 COGs COG1033 exporter of the RND superfamily protein K07003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006541 604.0
DYD3_k127_1506656_1 Multicopper oxidase K06324 - 1.16.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000852 496.0
DYD3_k127_1506656_10 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000008391 250.0
DYD3_k127_1506656_11 Protein of unknown function (DUF3293) - - - 0.0000000000000000000000000000000000000000000000000000000000000000004286 233.0
DYD3_k127_1506656_12 negative regulation of canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment - - - 0.000000000000000000000000000000000000000000002196 184.0
DYD3_k127_1506656_13 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000000000000000000000003292 172.0
DYD3_k127_1506656_14 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.00000000000000000000000000000000001531 137.0
DYD3_k127_1506656_15 Membrane K08988 - - 0.00000000000000000000000006623 115.0
DYD3_k127_1506656_2 His Kinase A (phosphoacceptor) domain K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 369.0
DYD3_k127_1506656_3 Tim44 K15539 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 345.0
DYD3_k127_1506656_4 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 309.0
DYD3_k127_1506656_5 ACT domain K01079 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 312.0
DYD3_k127_1506656_6 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009102 290.0
DYD3_k127_1506656_7 HflC and HflK could regulate a protease K04087 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001241 278.0
DYD3_k127_1506656_8 PFAM O-methyltransferase K00588 - 2.1.1.104 0.000000000000000000000000000000000000000000000000000000000000000000000008744 249.0
DYD3_k127_1506656_9 HflC and HflK could encode or regulate a protease K04088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000008042 248.0
DYD3_k127_1520982_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1228.0
DYD3_k127_1520982_1 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 456.0
DYD3_k127_1520982_2 Belongs to the CinA family K03742,K03743 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 3.5.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006227 358.0
DYD3_k127_1520982_3 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 310.0
DYD3_k127_1520982_4 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000003983 243.0
DYD3_k127_1520982_5 - - - - 0.000000000000000000002071 103.0
DYD3_k127_1536861_0 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 1.17e-249 795.0
DYD3_k127_1536861_1 Family membership K08884 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 364.0
DYD3_k127_1536861_10 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752,K13818 - 2.7.7.77 0.000000000006098 73.0
DYD3_k127_1536861_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002663 318.0
DYD3_k127_1536861_3 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 322.0
DYD3_k127_1536861_4 Binding-protein-dependent transport system inner membrane component K02018,K02046,K15496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002178 279.0
DYD3_k127_1536861_5 Bacterial extracellular solute-binding protein K02020 - - 0.0000000000000000000000000000000000000000000000000000000000000000004099 241.0
DYD3_k127_1536861_6 Redoxin - - - 0.000000000000000000000000000000000000000000000000000001067 199.0
DYD3_k127_1536861_7 ABC transporter K02017 - 3.6.3.29 0.0000000000000000000000000000000000000000000000001832 197.0
DYD3_k127_1536861_8 Transglycosylase associated protein - - - 0.000000000000000000000001825 107.0
DYD3_k127_1536861_9 carbon-nitrogen ligase activity, with glutamine as amido-N-donor K09117 - - 0.0000000000001445 79.0
DYD3_k127_1537028_0 Tetratricopeptide repeat - - - 0.0 1075.0
DYD3_k127_1537028_1 Belongs to the ClpA ClpB family K03694 - - 1.196e-307 961.0
DYD3_k127_1537028_10 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002212 580.0
DYD3_k127_1537028_11 Insulinase (Peptidase family M16) K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001733 522.0
DYD3_k127_1537028_12 Type II secretion system (T2SS), protein E, N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002725 497.0
DYD3_k127_1537028_13 Aminopeptidase P, N-terminal domain K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001517 473.0
DYD3_k127_1537028_14 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K01835,K01840 - 5.4.2.2,5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000667 450.0
DYD3_k127_1537028_15 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002788 458.0
DYD3_k127_1537028_16 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007085 456.0
DYD3_k127_1537028_17 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 429.0
DYD3_k127_1537028_18 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016491,GO:0016625,GO:0016903,GO:0016999,GO:0017144,GO:0019752,GO:0030312,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0046872,GO:0047553,GO:0055114,GO:0071704,GO:0071944,GO:0072350 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001934 441.0
DYD3_k127_1537028_19 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007596 433.0
DYD3_k127_1537028_2 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 5.043e-296 918.0
DYD3_k127_1537028_20 Insulinase (Peptidase family M16) K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002044 409.0
DYD3_k127_1537028_21 MazG nucleotide pyrophosphohydrolase domain K02499,K04765 - 3.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002065 395.0
DYD3_k127_1537028_22 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004939 412.0
DYD3_k127_1537028_23 Belongs to the SEDS family K05837 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 402.0
DYD3_k127_1537028_24 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002492 383.0
DYD3_k127_1537028_25 Belongs to the FPP GGPP synthase family K00805,K02523 - 2.5.1.30,2.5.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009361 377.0
DYD3_k127_1537028_26 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K00647,K09458 - 2.3.1.179,2.3.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 371.0
DYD3_k127_1537028_27 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005056 351.0
DYD3_k127_1537028_28 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001906 364.0
DYD3_k127_1537028_29 MotA/TolQ/ExbB proton channel family K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 342.0
DYD3_k127_1537028_3 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00174 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0030312,GO:0044464,GO:0050896,GO:0055114,GO:0071944 1.2.7.11,1.2.7.3 7.311e-246 776.0
DYD3_k127_1537028_30 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000339 355.0
DYD3_k127_1537028_31 MotA/TolQ/ExbB proton channel family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002337 331.0
DYD3_k127_1537028_32 associated with various cellular activities K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000648 338.0
DYD3_k127_1537028_33 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008958 336.0
DYD3_k127_1537028_34 Involved in formation and maintenance of cell shape K03570 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 312.0
DYD3_k127_1537028_35 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003081 317.0
DYD3_k127_1537028_36 Lysylphosphatidylglycerol synthase TM region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003545 307.0
DYD3_k127_1537028_37 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006372 304.0
DYD3_k127_1537028_38 Glutamine amidotransferases class-II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002036 296.0
DYD3_k127_1537028_39 Protein kinase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009575 297.0
DYD3_k127_1537028_4 NAD(P)-binding Rossmann-like domain - - - 1.533e-241 769.0
DYD3_k127_1537028_40 Saccharopine dehydrogenase NADP binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006021 279.0
DYD3_k127_1537028_41 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004395 266.0
DYD3_k127_1537028_42 Cupin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009113 249.0
DYD3_k127_1537028_43 Biopolymer transport protein ExbD/TolR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001366 249.0
DYD3_k127_1537028_44 PFAM RNP-1 like RNA-binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001498 256.0
DYD3_k127_1537028_45 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002612 257.0
DYD3_k127_1537028_46 Belongs to the pseudouridine synthase RsuA family K06178,K06182 - 5.4.99.21,5.4.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000001018 253.0
DYD3_k127_1537028_47 CBD_II K01728 - 4.2.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000472 259.0
DYD3_k127_1537028_48 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005655 256.0
DYD3_k127_1537028_49 Biopolymer transport protein ExbD/TolR - - - 0.00000000000000000000000000000000000000000000000000000000000000000002614 237.0
DYD3_k127_1537028_5 Penicillin-binding Protein dimerisation domain K05515 - 3.4.16.4 1.193e-223 720.0
DYD3_k127_1537028_50 Enoyl-CoA hydratase/isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000006332 239.0
DYD3_k127_1537028_51 repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000009685 244.0
DYD3_k127_1537028_52 Cellulase (glycosyl hydrolase family 5) K01179 - 3.2.1.4 0.00000000000000000000000000000000000000000000000000000000000000001469 241.0
DYD3_k127_1537028_54 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase - - - 0.00000000000000000000000000000000000000000000000000000000004644 216.0
DYD3_k127_1537028_55 Biopolymer transport protein ExbD/TolR - - - 0.000000000000000000000000000000000000000000000000000000002738 205.0
DYD3_k127_1537028_56 epimerase dehydratase K00091 - 1.1.1.219 0.00000000000000000000000000000000000000000000000000000000327 212.0
DYD3_k127_1537028_57 RNA polymerase K03088 - - 0.0000000000000000000000000000000000000000000000000000006901 199.0
DYD3_k127_1537028_58 - - - - 0.0000000000000000000000000000000000000000000000000000008523 197.0
DYD3_k127_1537028_59 C2 domain K06399 - 3.4.21.116 0.000000000000000000000000000000000000000000000000000002088 209.0
DYD3_k127_1537028_6 response regulator K07713 - - 1.799e-201 637.0
DYD3_k127_1537028_60 Biopolymer transport protein ExbD/TolR - - - 0.00000000000000000000000000000000000000000000000000003578 192.0
DYD3_k127_1537028_61 polysaccharide export K01991 - - 0.0000000000000000000000000000000000000000000000000002131 194.0
DYD3_k127_1537028_62 repeat protein - - - 0.00000000000000000000000000000000000000000000000003375 189.0
DYD3_k127_1537028_63 Maf-like protein K06287 - - 0.00000000000000000000000000000000000000000000000003917 185.0
DYD3_k127_1537028_64 Esterase PHB depolymerase K03932 - - 0.0000000000000000000000000000000000000000000000002994 188.0
DYD3_k127_1537028_67 Peptidase family M50 K06212,K06402 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000004663 181.0
DYD3_k127_1537028_68 Extensin-like protein C-terminus - - - 0.0000000000000000000000000000000000000000000001649 178.0
DYD3_k127_1537028_69 Belongs to the GcvT family K06980 - - 0.00000000000000000000000000000000000000000009441 177.0
DYD3_k127_1537028_7 Rod shape-determining protein K03569 - - 3.974e-198 621.0
DYD3_k127_1537028_71 Putative transposase - - - 0.00000000000000000000000000000000000000001697 166.0
DYD3_k127_1537028_72 - - - - 0.0000000000000000000000000000000000000001476 158.0
DYD3_k127_1537028_73 zinc-ribbon domain - - - 0.0000000000000000000000000000000000000003023 168.0
DYD3_k127_1537028_74 - - - - 0.00000000000000000000000000000000000002947 147.0
DYD3_k127_1537028_75 PFAM RNA recognition motif - - - 0.00000000000000000000000000000000001974 140.0
DYD3_k127_1537028_76 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.0000000000000000000000000000000001646 135.0
DYD3_k127_1537028_77 - - - - 0.0000000000000000000000000000000006907 135.0
DYD3_k127_1537028_8 helicase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005301 625.0
DYD3_k127_1537028_80 OmpA family - - - 0.0000000000000000000000000000005545 135.0
DYD3_k127_1537028_82 - - - - 0.000000000000000000000001372 115.0
DYD3_k127_1537028_83 Ribbon-helix-helix domain - - - 0.000000000000000000003311 95.0
DYD3_k127_1537028_84 oxidoreductase activity K07114 - - 0.000000000000000000004706 107.0
DYD3_k127_1537028_86 - - - - 0.000000000000000003218 96.0
DYD3_k127_1537028_87 Phosphopantetheine attachment site K02078 - - 0.0000000000000001813 92.0
DYD3_k127_1537028_89 Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme isoform in each plant tissue - - - 0.000000000000000829 89.0
DYD3_k127_1537028_9 Biotin carboxylase K01941,K01961,K01968 - 6.3.4.14,6.3.4.6,6.4.1.2,6.4.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007789 582.0
DYD3_k127_1537028_90 Protein of unknown function (DUF3892) - - - 0.00000000004445 66.0
DYD3_k127_1537028_91 - - - - 0.000000007125 58.0
DYD3_k127_1537028_92 His Kinase A (phosphoacceptor) domain - - - 0.00003617 53.0
DYD3_k127_1537028_93 Pyrophosphate-energized vacuolar membrane proton K01507 GO:0000325,GO:0001101,GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005768,GO:0005773,GO:0005774,GO:0005794,GO:0005886,GO:0006810,GO:0006811,GO:0006950,GO:0006970,GO:0007275,GO:0008150,GO:0009414,GO:0009415,GO:0009507,GO:0009526,GO:0009536,GO:0009628,GO:0009651,GO:0009678,GO:0009705,GO:0009914,GO:0009926,GO:0009941,GO:0010008,GO:0010035,GO:0010248,GO:0010817,GO:0012505,GO:0015399,GO:0015405,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0022804,GO:0022857,GO:0031090,GO:0031410,GO:0031967,GO:0031975,GO:0031982,GO:0032501,GO:0032502,GO:0034220,GO:0042221,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044433,GO:0044434,GO:0044435,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0048366,GO:0048367,GO:0048731,GO:0048827,GO:0048856,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0060918,GO:0065007,GO:0065008,GO:0071944,GO:0097708,GO:0098588,GO:0098805,GO:0099402,GO:1901700 3.6.1.1 0.00005897 56.0
DYD3_k127_1538654_0 Pyridine nucleotide-disulphide oxidoreductase K00362 - 1.7.1.15 0.0 1096.0
DYD3_k127_1538654_1 Protein kinase domain - - - 8.381e-224 735.0
DYD3_k127_1538654_10 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.0000000000000000000000000000000000003174 142.0
DYD3_k127_1538654_11 formate dehydrogenase (NAD+) activity - - - 0.0000000000000000000000000000000004583 135.0
DYD3_k127_1538654_13 Rieske-like [2Fe-2S] domain K00363 - 1.7.1.15 0.0000000000000000000000000003493 118.0
DYD3_k127_1538654_14 Belongs to the BolA IbaG family - - - 0.00000000000000000000002622 102.0
DYD3_k127_1538654_15 Furin-like repeats - - - 0.0000000000002168 85.0
DYD3_k127_1538654_16 Si dkey-21a6.5 - - - 0.00000003104 67.0
DYD3_k127_1538654_17 serine-type endopeptidase activity - - - 0.0001138 55.0
DYD3_k127_1538654_2 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002183 320.0
DYD3_k127_1538654_4 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004347 305.0
DYD3_k127_1538654_6 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.000000000000000000000000000000000000000000000000000000000000002266 224.0
DYD3_k127_1538654_7 PFAM Protein kinase domain K08309 - - 0.000000000000000000000000000000000000000000000000000000000009772 220.0
DYD3_k127_1538654_8 alpha beta - - - 0.0000000000000000000000000000000000000000000000000000000000759 231.0
DYD3_k127_1538654_9 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.0000000000000000000000000000000000000000001933 171.0
DYD3_k127_1546668_0 Methionine synthase K00548 - 2.1.1.13 0.0 2076.0
DYD3_k127_1546668_1 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system K01547 - 3.6.3.12 1.917e-321 998.0
DYD3_k127_1546668_10 Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system K02045 - 3.6.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000367 454.0
DYD3_k127_1546668_11 CAAX prenyl protease N-terminal, five membrane helices K06013 - 3.4.24.84 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002679 432.0
DYD3_k127_1546668_12 Cupin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009883 410.0
DYD3_k127_1546668_13 Bacterial extracellular solute-binding protein K02048 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007106 407.0
DYD3_k127_1546668_14 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006628 381.0
DYD3_k127_1546668_15 Parallel beta-helix repeats - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002883 370.0
DYD3_k127_1546668_16 TIGRFAM sulfate ABC transporter K02046 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001787 354.0
DYD3_k127_1546668_17 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001569 335.0
DYD3_k127_1546668_18 Response regulator receiver K07667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006419 308.0
DYD3_k127_1546668_19 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 313.0
DYD3_k127_1546668_2 Osmosensitive K+ channel His kinase sensor domain K07646 - 2.7.13.3 4.193e-287 907.0
DYD3_k127_1546668_20 PFAM SMP-30 Gluconolaconase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003006 320.0
DYD3_k127_1546668_21 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002037 312.0
DYD3_k127_1546668_22 Binding-protein-dependent transport system inner membrane component K02047 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 296.0
DYD3_k127_1546668_23 2OG-Fe(II) oxygenase superfamily K03919 - 1.14.11.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008614 282.0
DYD3_k127_1546668_24 PFAM Phosphate-selective porin O K07221 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001273 286.0
DYD3_k127_1546668_25 impB/mucB/samB family K02346 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000001805 256.0
DYD3_k127_1546668_26 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex K01548 - 3.6.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000409 236.0
DYD3_k127_1546668_27 CoA-binding protein K06929 - - 0.000000000000000000000000000000000000000000003008 167.0
DYD3_k127_1546668_28 Electron transfer DM13 - - - 0.000000000000000000000000000000000000006768 151.0
DYD3_k127_1546668_29 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000001466 156.0
DYD3_k127_1546668_3 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane K01546 GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0008556,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0030312,GO:0030955,GO:0031004,GO:0031224,GO:0031226,GO:0031420,GO:0032991,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043167,GO:0043169,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0046872,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0071944,GO:0090533,GO:0090662,GO:0098533,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1902494,GO:1902495,GO:1904949,GO:1990351 3.6.3.12 4.063e-252 793.0
DYD3_k127_1546668_31 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000006303 128.0
DYD3_k127_1546668_33 signal transduction histidine kinase - - - 0.0000000000000000000000007224 118.0
DYD3_k127_1546668_35 - - - - 0.0000000000003595 83.0
DYD3_k127_1546668_36 Cysteine-rich CWC - - - 0.0000000001425 65.0
DYD3_k127_1546668_38 23S rRNA-intervening sequence protein - - - 0.00000008952 63.0
DYD3_k127_1546668_39 SlyX K03745 - - 0.000002752 54.0
DYD3_k127_1546668_4 cellulose binding - - - 6.609e-198 644.0
DYD3_k127_1546668_5 Sphingolipid Delta4-desaturase (DES) K04712 - 1.14.18.5,1.14.19.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001954 520.0
DYD3_k127_1546668_6 alcohol dehydrogenase K00001,K13953 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007758 468.0
DYD3_k127_1546668_7 Sigma-54 interaction domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002891 471.0
DYD3_k127_1546668_8 SMART Tetratricopeptide domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002244 481.0
DYD3_k127_1546668_9 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000211 466.0
DYD3_k127_1551028_0 Carbamoyl-phosphate synthetase large chain domain protein K01941 - 6.3.4.6 0.0 1467.0
DYD3_k127_1551028_1 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 8.205e-318 998.0
DYD3_k127_1551028_10 Belongs to the methyltransferase superfamily K07444,K12297 - 2.1.1.173,2.1.1.264 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000505 375.0
DYD3_k127_1551028_11 Protein of unknown function (DUF1587) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003244 378.0
DYD3_k127_1551028_12 Sugar (and other) transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002157 370.0
DYD3_k127_1551028_13 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 362.0
DYD3_k127_1551028_14 Domain of unknown function (DUF1989) K09967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009053 332.0
DYD3_k127_1551028_15 Citrate synthase, C-terminal domain K01647 - 2.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003092 322.0
DYD3_k127_1551028_16 Domain of unknown function (DUF1989) K09967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009183 284.0
DYD3_k127_1551028_17 Uncharacterised protein family UPF0066 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007128 270.0
DYD3_k127_1551028_18 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 GO:0003674,GO:0003824,GO:0004139,GO:0005975,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009262,GO:0009264,GO:0009987,GO:0016052,GO:0016829,GO:0016830,GO:0016832,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 4.1.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000002922 250.0
DYD3_k127_1551028_19 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000008668 246.0
DYD3_k127_1551028_2 B12 binding domain - - - 2.971e-270 844.0
DYD3_k127_1551028_20 Alpha/beta hydrolase family K01563,K22318 - 3.8.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000002544 255.0
DYD3_k127_1551028_21 Outer membrane lipoprotein-sorting protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001888 246.0
DYD3_k127_1551028_22 Esterase PHB depolymerase K03932 - - 0.00000000000000000000000000000000000000000000000000000000000000004823 243.0
DYD3_k127_1551028_23 Protein of unknown function (DUF1552) - - - 0.0000000000000000000000000000000000000000000000005102 195.0
DYD3_k127_1551028_24 transcriptional regulator K09017 - - 0.000000000000000000000000000000000000000002248 164.0
DYD3_k127_1551028_27 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000008373 121.0
DYD3_k127_1551028_28 COG1278 Cold shock K03704 - - 0.00000000000000000000000003535 111.0
DYD3_k127_1551028_29 oxidoreductase activity K07114 - - 0.00000000000000000000005541 113.0
DYD3_k127_1551028_3 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II - - - 5.22e-219 690.0
DYD3_k127_1551028_31 rRNA binding - - - 0.00000000000004304 83.0
DYD3_k127_1551028_33 - - - - 0.000000008057 68.0
DYD3_k127_1551028_34 Arylsulfotransferase (ASST) - - - 0.000006383 59.0
DYD3_k127_1551028_4 PFAM Amidase K01457,K01941 - 3.5.1.54,6.3.4.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 600.0
DYD3_k127_1551028_5 PFAM NAD dependent epimerase dehydratase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 444.0
DYD3_k127_1551028_6 NMT1/THI5 like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005759 403.0
DYD3_k127_1551028_7 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008704 396.0
DYD3_k127_1551028_8 Binding-protein-dependent transport system inner membrane component K02050 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 389.0
DYD3_k127_1551028_9 ATPases associated with a variety of cellular activities - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002603 380.0
DYD3_k127_1579630_0 DNA internalization-related competence protein ComEC Rec2 K02238 - - 7.166e-203 659.0
DYD3_k127_1579630_1 AAA C-terminal domain K07478 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008025 541.0
DYD3_k127_1579630_2 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.000000000000000000000000000000000000000000000000000000000000000000001899 243.0
DYD3_k127_1579630_3 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.0000000000000000000000000000000000000000000000000000000000008928 214.0
DYD3_k127_1579630_4 - - - - 0.000000000000000000000000000000000000000000000000000000000001269 222.0
DYD3_k127_1579630_5 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000309 201.0
DYD3_k127_1579630_6 PFAM transposase IS116 IS110 IS902 family protein - - - 0.0000000000000000000000000000000000000000007695 160.0
DYD3_k127_1579630_7 Sulfatase-modifying factor enzyme 1 - - - 0.000000000002316 75.0
DYD3_k127_1580906_0 Molecular chaperone. Has ATPase activity K04079 GO:0000302,GO:0000303,GO:0000305,GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0009987,GO:0010035,GO:0016020,GO:0030312,GO:0033554,GO:0034599,GO:0034614,GO:0042221,GO:0044464,GO:0050896,GO:0051716,GO:0070887,GO:0071450,GO:0071451,GO:0071944,GO:1901700,GO:1901701 - 3.154e-207 662.0
DYD3_k127_1580906_1 cellulose 1,4-beta-cellobiosidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005302 461.0
DYD3_k127_1580906_10 bacterial-type flagellum-dependent cell motility - - - 0.0000000000000000000000000000000000000001285 172.0
DYD3_k127_1580906_11 - - - - 0.00000000000000000000000000000000000001489 153.0
DYD3_k127_1580906_12 Protein of unknown function (DUF1552) - - - 0.0000000000000000000000000000003914 143.0
DYD3_k127_1580906_13 Activator of Hsp90 ATPase - - - 0.000000000000000000001247 105.0
DYD3_k127_1580906_14 Glycosyl hydrolases family 43 - - - 0.000000000000000001383 101.0
DYD3_k127_1580906_15 cell envelope organization K05807,K08309 - - 0.000000000000009822 86.0
DYD3_k127_1580906_16 YCII-related domain - - - 0.000000009089 63.0
DYD3_k127_1580906_17 Sigma-70 region 2 K03088 - - 0.0001021 52.0
DYD3_k127_1580906_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 448.0
DYD3_k127_1580906_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007336 429.0
DYD3_k127_1580906_4 Sigma-70 region 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002205 324.0
DYD3_k127_1580906_5 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009358 324.0
DYD3_k127_1580906_6 Protein of unknown function (DUF1587) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001572 297.0
DYD3_k127_1580906_7 4-Hydroxyphenylpyruvate dioxygenase K00406,K05606,K17315 - 5.1.99.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000721 271.0
DYD3_k127_1580906_8 ATPase family associated with various cellular activities (AAA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000001157 263.0
DYD3_k127_1580906_9 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000000000000000000000001073 191.0
DYD3_k127_1585319_0 PFAM ABC transporter related K15738 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005988 517.0
DYD3_k127_1585319_1 Amino-transferase class IV K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003696 488.0
DYD3_k127_1585319_2 Zinc-binding dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000228 369.0
DYD3_k127_1585319_3 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 313.0
DYD3_k127_1585319_4 TIGRFAM DJ-1 family protein K03152 - 3.5.1.124 0.00000000000000000000000000000000000000000000001277 176.0
DYD3_k127_1593760_0 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 5.452e-222 694.0
DYD3_k127_1593760_1 cell adhesion involved in biofilm formation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004134 523.0
DYD3_k127_1593760_2 Right handed beta helix region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002607 378.0
DYD3_k127_1593760_3 DNA-templated transcription, initiation K03088 GO:0000988,GO:0000990,GO:0002791,GO:0003674,GO:0006355,GO:0006950,GO:0008150,GO:0009266,GO:0009405,GO:0009408,GO:0009628,GO:0009889,GO:0010468,GO:0010556,GO:0010565,GO:0016987,GO:0019216,GO:0019217,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0032879,GO:0032880,GO:0043254,GO:0044087,GO:0044419,GO:0050708,GO:0050789,GO:0050794,GO:0050896,GO:0051046,GO:0051049,GO:0051128,GO:0051171,GO:0051223,GO:0051252,GO:0051704,GO:0060255,GO:0062012,GO:0065007,GO:0070201,GO:0080090,GO:0090087,GO:0140110,GO:1903506,GO:1903530,GO:2000112,GO:2000142,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000936 201.0
DYD3_k127_1593760_4 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000008767 160.0
DYD3_k127_1593760_6 Involved in the tonB-independent uptake of proteins K03641 - - 0.0000000000000000000000000001864 128.0
DYD3_k127_1627588_0 Belongs to the binding-protein-dependent transport system permease family K02057,K10440 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003429 529.0
DYD3_k127_1627588_1 Converts alpha-aldose to the beta-anomer K01785 - 5.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002339 473.0
DYD3_k127_1627588_2 ATPases associated with a variety of cellular activities - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005961 486.0
DYD3_k127_1627588_3 (ABC) transporter K10439 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 445.0
DYD3_k127_1627588_4 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001315 262.0
DYD3_k127_1627588_5 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000004624 225.0
DYD3_k127_1627588_6 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000000000000000000000000000006132 198.0
DYD3_k127_1627588_7 PFAM Prephenate dehydrogenase K00210,K04517 - 1.3.1.12 0.000000000000000000000000000000001607 140.0
DYD3_k127_1627588_8 NeuB family K03856 - 2.5.1.54 0.000000000000008691 85.0
DYD3_k127_1627588_9 PilZ domain - - - 0.00000002182 65.0
DYD3_k127_1649672_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007425 543.0
DYD3_k127_1649672_1 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000009257 271.0
DYD3_k127_1684074_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002885 541.0
DYD3_k127_1684074_1 Belongs to the SAICAR synthetase family K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005208 464.0
DYD3_k127_1684074_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005475 395.0
DYD3_k127_1684074_3 Dienelactone hydrolase family K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 368.0
DYD3_k127_1685576_0 Male sterility protein K01897 - 6.2.1.3 0.0 1494.0
DYD3_k127_1685576_1 response regulator - - - 4.937e-263 831.0
DYD3_k127_1685576_10 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000002633 194.0
DYD3_k127_1685576_11 - - - - 0.0000000000000000000000000000000000000000000000001982 181.0
DYD3_k127_1685576_14 Avidin family - - - 0.00000000000000000002708 96.0
DYD3_k127_1685576_15 Belongs to the glycosyl hydrolase 5 (cellulase A) family K01179,K13276 - 3.2.1.4 0.000000000000003192 90.0
DYD3_k127_1685576_16 Acid phosphatase homologues - - - 0.000000000000004571 86.0
DYD3_k127_1685576_17 Beta-lactamase class C and other penicillin binding proteins - - - 0.00000000001695 78.0
DYD3_k127_1685576_18 - - - - 0.00000003734 60.0
DYD3_k127_1685576_19 Transposase zinc-binding domain - - - 0.0000004215 55.0
DYD3_k127_1685576_2 Peptidase S46 - - - 1.739e-205 664.0
DYD3_k127_1685576_20 Protein of unknown function (DUF1592) - - - 0.00000257 50.0
DYD3_k127_1685576_21 ORF located using - - - 0.0005518 50.0
DYD3_k127_1685576_3 Glycosylase K18785 - 2.4.1.319,2.4.1.320 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007259 463.0
DYD3_k127_1685576_4 Protein of unknown function (DUF1552) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009939 369.0
DYD3_k127_1685576_5 Zn-dependent hydrolases of the beta-lactamase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 365.0
DYD3_k127_1685576_6 Belongs to the peptidase M48B family K03799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004647 352.0
DYD3_k127_1685576_7 epimerase dehydratase K00091 - 1.1.1.219 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001811 342.0
DYD3_k127_1685576_8 Phosphodiester glycosidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002893 306.0
DYD3_k127_1685576_9 desaturase K00507 - 1.14.19.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004567 288.0
DYD3_k127_1696364_0 MMPL family K07003 - - 7.598e-258 820.0
DYD3_k127_1696364_1 synthase K01858 - 5.5.1.4 2.858e-217 682.0
DYD3_k127_1696364_10 PFAM Multi antimicrobial extrusion protein MatE K03327 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002853 383.0
DYD3_k127_1696364_11 Enoyl-(Acyl carrier protein) reductase K00065 - 1.1.1.127 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002467 359.0
DYD3_k127_1696364_12 PhoD-like phosphatase K01113 - 3.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000269 365.0
DYD3_k127_1696364_13 protein-(glutamine-N5) methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 303.0
DYD3_k127_1696364_14 PAP2 superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000006331 232.0
DYD3_k127_1696364_15 RNA pseudouridylate synthase K06175 - 5.4.99.26 0.0000000000000000000000000000000000000000000000000000000000000004653 228.0
DYD3_k127_1696364_16 CBD_II - - - 0.0000000000000000000000000000000000000000000000004555 198.0
DYD3_k127_1696364_17 glyoxalase III activity K16260 - - 0.000000000000000000000000000000000000000128 156.0
DYD3_k127_1696364_18 PFAM response regulator receiver K03413 - - 0.00000000000000000000000000000000000001191 153.0
DYD3_k127_1696364_19 Signal transducing histidine kinase homodimeric K03407 - 2.7.13.3 0.00000000000000000000000000000000000009189 160.0
DYD3_k127_1696364_2 Hydroxymethylglutaryl-coenzyme A synthase N terminal K01641 - 2.3.3.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000197 546.0
DYD3_k127_1696364_20 Transcriptional regulator K07506 - - 0.0000000000000000000000000000003943 134.0
DYD3_k127_1696364_21 Oxidoreductase NAD-binding domain K00528 - 1.18.1.2,1.19.1.1 0.00000000000000000000000000000944 127.0
DYD3_k127_1696364_24 FCD K05799 - - 0.00000000000000000009708 99.0
DYD3_k127_1696364_25 cell redox homeostasis - - - 0.00000000000000001677 96.0
DYD3_k127_1696364_26 - - - - 0.0005154 49.0
DYD3_k127_1696364_3 Protein of unknown function (DUF1552) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 476.0
DYD3_k127_1696364_4 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006255 457.0
DYD3_k127_1696364_5 xylan catabolic process K03932 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003149 450.0
DYD3_k127_1696364_6 L-lysine 6-monooxygenase (NADPH-requiring) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002552 437.0
DYD3_k127_1696364_7 Poly(3-hydroxybutyrate) depolymerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 431.0
DYD3_k127_1696364_8 Aldehyde dehydrogenase family K00129 - 1.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006699 434.0
DYD3_k127_1696364_9 GtrA-like protein K00995 - 2.7.8.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009568 395.0
DYD3_k127_1709790_0 Flavin containing amine oxidoreductase - - - 1.348e-203 650.0
DYD3_k127_1709790_1 TIGRFAM cytochrome C family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005793 349.0
DYD3_k127_1709790_10 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000004136 79.0
DYD3_k127_1709790_2 heat shock protein binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003064 340.0
DYD3_k127_1709790_3 NapC/NirT cytochrome c family, N-terminal region K02569 - - 0.00000000000000000000000000000000000000000000000000000001503 205.0
DYD3_k127_1709790_4 Cytochrome c7 and related cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000007649 214.0
DYD3_k127_1709790_5 integral membrane protein (DUF2270) - - - 0.000000000000000000000000000000000000000000000009475 176.0
DYD3_k127_1709790_8 Uncharacterized conserved protein (DUF2249) K07322 - - 0.00000000000002641 81.0
DYD3_k127_1709790_9 - - - - 0.0000000000008862 81.0
DYD3_k127_1765808_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002313 427.0
DYD3_k127_1765808_1 Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily K01911 - 6.2.1.26 0.00000000000000000000000000000000000007491 150.0
DYD3_k127_1765808_2 thioesterase K07107,K12073 - 3.1.2.28 0.00000000000000000000002831 106.0
DYD3_k127_1770398_0 Belongs to the glycosyl hydrolase 43 family K06113 - 3.2.1.99 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004937 451.0
DYD3_k127_1770398_1 Bacterial extracellular solute-binding proteins, family 5 Middle K15580 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008977 438.0
DYD3_k127_1770398_10 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000277 127.0
DYD3_k127_1770398_11 heat shock protein binding K03686,K05516 - - 0.000000002049 64.0
DYD3_k127_1770398_12 Sigma-70 region 2 - - - 0.00000001686 64.0
DYD3_k127_1770398_13 Belongs to the glycosyl hydrolase family 6 K19668,K20844 - 3.2.1.55,3.2.1.91 0.0000002797 63.0
DYD3_k127_1770398_14 - - - - 0.00004358 55.0
DYD3_k127_1770398_2 Belongs to the ABC transporter superfamily K02031,K12371,K15583 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000044 338.0
DYD3_k127_1770398_3 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009686 314.0
DYD3_k127_1770398_4 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002075 278.0
DYD3_k127_1770398_5 Binding-protein-dependent transport system inner membrane component K02033,K15581 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002311 284.0
DYD3_k127_1770398_6 N-terminal TM domain of oligopeptide transport permease C K02034,K15582 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003026 272.0
DYD3_k127_1770398_7 HxlR-like helix-turn-helix - - - 0.000000000000000000000000000000000000000000000000000000000000005107 225.0
DYD3_k127_1770398_8 Pyridoxamine 5'-phosphate oxidase - - - 0.000000000000000000000000000000000000000004646 158.0
DYD3_k127_1770398_9 polysaccharide catabolic process - - - 0.0000000000000000000000000000005056 136.0
DYD3_k127_1787358_0 AMP-binding enzyme K01897 - 6.2.1.3 1.705e-208 664.0
DYD3_k127_1787358_1 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000948 556.0
DYD3_k127_1787358_2 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 425.0
DYD3_k127_1787358_3 domain protein K21029 - 2.7.7.80 0.0000000000000000000000000000000000000000000000000000000000003131 220.0
DYD3_k127_1787358_4 vancomycin resistance protein K18346 - - 0.0000000000000000000000000000000000000000000000000000008556 205.0
DYD3_k127_1787358_5 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000003474 190.0
DYD3_k127_1787358_6 COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily - - - 0.000000000000000000000000000000000000000000006099 179.0
DYD3_k127_1787358_7 Thiamine biosynthesis K03154 - - 0.0000000000000000000001569 98.0
DYD3_k127_1789354_0 Sulfatase - - - 5.625e-293 932.0
DYD3_k127_1789354_1 Tetratricopeptide repeat - - - 7.063e-243 779.0
DYD3_k127_1789354_10 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005295 359.0
DYD3_k127_1789354_11 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006253 316.0
DYD3_k127_1789354_12 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002457 310.0
DYD3_k127_1789354_13 Pectate lyase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009524 295.0
DYD3_k127_1789354_14 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005061 266.0
DYD3_k127_1789354_15 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004134 272.0
DYD3_k127_1789354_16 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.0000000000000000000000000000000000000000000000000000000000245 219.0
DYD3_k127_1789354_17 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.000000000000000000000000000000000000000000000000000000000237 224.0
DYD3_k127_1789354_18 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000000000000000000000004088 199.0
DYD3_k127_1789354_19 - K21449 - - 0.0000000000000000000000000000000000000000000000000000001467 214.0
DYD3_k127_1789354_2 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 7.866e-205 657.0
DYD3_k127_1789354_20 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23 0.0000000000000000000000000000000000000000000008325 171.0
DYD3_k127_1789354_21 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.0000000000000000000000000000000000000002332 154.0
DYD3_k127_1789354_22 vancomycin resistance protein K18346 - - 0.000000000000000000000000000000000000007754 151.0
DYD3_k127_1789354_23 InterPro IPR007367 - - - 0.0000000000000000000000000000003122 129.0
DYD3_k127_1789354_24 Tetratricopeptide repeat - - - 0.000000000000000000000000000001964 134.0
DYD3_k127_1789354_25 Penicillin-binding protein 2 K05515 - 3.4.16.4 0.0000000000000000000000000008137 125.0
DYD3_k127_1789354_3 Bacterial regulatory protein, Fis family K13599 - - 1.087e-202 654.0
DYD3_k127_1789354_4 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 608.0
DYD3_k127_1789354_5 translation initiation factor activity K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002236 586.0
DYD3_k127_1789354_6 ErfK ybiS ycfS ynhG family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001836 532.0
DYD3_k127_1789354_7 PQQ enzyme repeat K17713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009683 496.0
DYD3_k127_1789354_8 histidyl-tRNA synthetase K01892 - 6.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000817 493.0
DYD3_k127_1789354_9 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002697 441.0
DYD3_k127_1812198_0 arylsulfatase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000006155 256.0
DYD3_k127_1812198_1 Sulfatase-modifying factor enzyme 1 - - - 0.00000000000000000000000000000000000000000000000000000000004163 217.0
DYD3_k127_1812198_2 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.0001907 45.0
DYD3_k127_1812471_0 Protein of unknown function DUF58 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 480.0
DYD3_k127_1812471_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004955 469.0
DYD3_k127_1812471_2 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 0.000000000000000000000000000000000000000000000002061 192.0
DYD3_k127_1812471_3 ADP-glyceromanno-heptose 6-epimerase activity - - - 0.0000000000000000000000000000000000000001188 174.0
DYD3_k127_1812471_4 Toxic component of a toxin-antitoxin (TA) module K07171 GO:0008150,GO:0040008,GO:0045926,GO:0048519,GO:0050789,GO:0065007 - 0.00000000000000000000006114 105.0
DYD3_k127_1812471_6 cellulose binding - - - 0.000000000001337 81.0
DYD3_k127_1812471_7 response regulator, receiver K02483,K07667 - - 0.0000000001779 70.0
DYD3_k127_1812471_8 Belongs to the glycosyl hydrolase family 6 - - - 0.0000004663 63.0
DYD3_k127_1812471_9 Trypsin-like serine protease - - - 0.0000006759 60.0
DYD3_k127_1833178_0 - - - - 5.878e-202 651.0
DYD3_k127_1833178_1 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005888 288.0
DYD3_k127_1833178_3 - - - - 0.0000000000000000000000000000000000000005308 159.0
DYD3_k127_1833178_4 Thioredoxin-like - - - 0.00000000000000000000000000000000000002436 160.0
DYD3_k127_1833178_5 Thiol disulfide interchange protein dsbA - - - 0.0000000000000000000000000000000002831 145.0
DYD3_k127_1833178_6 Thiol disulfide interchange protein K02199 GO:0003674,GO:0003756,GO:0003824,GO:0008150,GO:0009987,GO:0016043,GO:0016853,GO:0016860,GO:0016864,GO:0017004,GO:0022607,GO:0034622,GO:0043933,GO:0044085,GO:0065003,GO:0071840,GO:0140096 - 0.00000001067 64.0
DYD3_k127_1833178_7 Calcium ion binding - GO:0002009,GO:0002165,GO:0003674,GO:0005198,GO:0005201,GO:0005575,GO:0005576,GO:0007275,GO:0007424,GO:0007444,GO:0007472,GO:0007475,GO:0007476,GO:0007552,GO:0007560,GO:0007591,GO:0008150,GO:0008362,GO:0008587,GO:0009653,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0022404,GO:0031012,GO:0032501,GO:0032502,GO:0035107,GO:0035114,GO:0035120,GO:0035220,GO:0035239,GO:0035295,GO:0040003,GO:0040005,GO:0042303,GO:0042335,GO:0044421,GO:0044719,GO:0048513,GO:0048563,GO:0048569,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048856,GO:0060429,GO:0060541,GO:0060562,GO:0065007,GO:0065008,GO:0090066 - 0.000007279 57.0
DYD3_k127_1833178_8 peroxiredoxin activity K03386,K03564,K16922 - 1.11.1.15 0.00002951 55.0
DYD3_k127_1849202_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006663 552.0
DYD3_k127_1849202_1 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006122 449.0
DYD3_k127_1849202_10 Sequence-specific endonuclease that cleaves unmethylated GATC sequences. It is involved in DNA mismatch repair K03573 GO:0000018,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009036,GO:0009987,GO:0015666,GO:0016787,GO:0016788,GO:0016888,GO:0016893,GO:0019219,GO:0019222,GO:0031323,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0043765,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0051716,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1990391 - 0.00000000000000000000000000000000000000000000000000000000000002823 228.0
DYD3_k127_1849202_11 F COG0518 GMP synthase - Glutamine amidotransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000003548 230.0
DYD3_k127_1849202_12 Responsible for synthesis of pseudouridine from uracil- 13 in transfer RNAs K06176 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0016070,GO:0016853,GO:0016866,GO:0034641,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.27 0.000000000000000000000000000000000000000000000000000000000002156 223.0
DYD3_k127_1849202_13 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000004144 198.0
DYD3_k127_1849202_14 Peptidase family M23 - - - 0.0000000000000000000000000000000000000000003541 171.0
DYD3_k127_1849202_15 Alcohol dehydrogenase GroES-like domain - - - 0.00000000000000000000000000000000000000000953 158.0
DYD3_k127_1849202_16 protein conserved in bacteria - - - 0.00000001269 67.0
DYD3_k127_1849202_17 EGF domain - - - 0.000000208 63.0
DYD3_k127_1849202_2 Family membership K08884 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 392.0
DYD3_k127_1849202_3 ErfK ybiS ycfS ynhG family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008327 392.0
DYD3_k127_1849202_4 cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001873 296.0
DYD3_k127_1849202_5 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000153 291.0
DYD3_k127_1849202_6 Protein kinase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001432 281.0
DYD3_k127_1849202_7 Patatin-like phospholipase K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009408 263.0
DYD3_k127_1849202_8 Protein serine threonine phosphatase K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000002562 229.0
DYD3_k127_1849202_9 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000003038 232.0
DYD3_k127_1907784_0 - - - - 2.992e-248 825.0
DYD3_k127_1907784_1 Family membership K08884 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007857 378.0
DYD3_k127_1907784_10 Type III flagellar switch regulator (C-ring) FliN C-term K03225 - - 0.00000002218 63.0
DYD3_k127_1907784_11 PFAM Protein kinase domain K08309 - - 0.00000002818 66.0
DYD3_k127_1907784_2 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 368.0
DYD3_k127_1907784_3 Methylase involved in ubiquinone menaquinone biosynthesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 330.0
DYD3_k127_1907784_4 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001029 248.0
DYD3_k127_1907784_5 xylan catabolic process K03932 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003233 255.0
DYD3_k127_1907784_6 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000003707 226.0
DYD3_k127_1907784_7 cell envelope organization K05807,K08309 - - 0.000000000000000000000000000000000000000000000000000000000000001232 230.0
DYD3_k127_1907784_8 SMART helix-turn-helix domain protein K18831 - - 0.00000000000000000000000000000000000000000001959 166.0
DYD3_k127_1907784_9 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system K19166 - - 0.000000000000000000000000000001577 125.0
DYD3_k127_1922727_0 pyruvate dehydrogenase (acetyl-transferring) activity K00163 - 1.2.4.1 0.0 1028.0
DYD3_k127_1922727_1 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region K00336 - 1.6.5.3 1.02e-220 696.0
DYD3_k127_1922727_10 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K03309,K11102,K11103 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005403 397.0
DYD3_k127_1922727_11 ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001951 372.0
DYD3_k127_1922727_12 inositol monophosphate 1-phosphatase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 351.0
DYD3_k127_1922727_13 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003516 334.0
DYD3_k127_1922727_14 Papain family cysteine protease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006272 336.0
DYD3_k127_1922727_15 PFAM Methyltransferase type - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006393 319.0
DYD3_k127_1922727_16 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007283 304.0
DYD3_k127_1922727_17 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009118 273.0
DYD3_k127_1922727_18 A G-specific K03575 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001425 278.0
DYD3_k127_1922727_19 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000005814 271.0
DYD3_k127_1922727_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0016020,GO:0044424,GO:0044464,GO:0071944 1.6.5.3 3.881e-200 630.0
DYD3_k127_1922727_20 SMART Integrin alpha beta-propellor repeat protein - - - 0.0000000000000000000000000000000000000000000000000000004354 213.0
DYD3_k127_1922727_22 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.0000000000000000000000000000000000000002168 153.0
DYD3_k127_1922727_23 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.0000000000000000000000000002777 129.0
DYD3_k127_1922727_24 Adenine glycosylase K03574,K03575 - 3.6.1.55 0.000000000000000000000000002361 121.0
DYD3_k127_1922727_25 Carboxypeptidase regulatory-like domain - - - 0.0000000000000001623 93.0
DYD3_k127_1922727_27 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.00000000000271 74.0
DYD3_k127_1922727_28 - - - - 0.000000007803 67.0
DYD3_k127_1922727_29 Belongs to the GHMP kinase family. GalK subfamily K00849 - 2.7.1.6 0.00002597 51.0
DYD3_k127_1922727_3 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006021 592.0
DYD3_k127_1922727_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 584.0
DYD3_k127_1922727_5 5-formyltetrahydrofolate cyclo-ligase activity K07137 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006226 474.0
DYD3_k127_1922727_7 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016740,GO:0016782,GO:0016783,GO:0016992,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0070283,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 412.0
DYD3_k127_1922727_8 Calcineurin-like phosphoesterase K07098 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001406 415.0
DYD3_k127_1922727_9 RmuC family K09760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003245 416.0
DYD3_k127_1927575_0 involved in fatty acid biosynthesis. catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl- acp. kas III catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. possesses both acetoacetyl-acp synthase and acetyl transacylase activities catalytic activity acyl- acyl-carrier protein malonyl- acyl-carrier protein 3-oxoacyl- acyl-carrier protein CO2 acyl-carrier protein K00648,K21378 - 2.3.1.180,2.3.1.194 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 314.0
DYD3_k127_1927575_1 - - - - 0.000000000000000000000000000000000000000000000000002051 201.0
DYD3_k127_1927575_2 Arylsulfotransferase (ASST) - - - 0.0005633 53.0
DYD3_k127_193082_0 AcrB/AcrD/AcrF family - - - 0.0 1289.0
DYD3_k127_193082_1 FtsX-like permease family K02004 - - 1.271e-209 677.0
DYD3_k127_193082_10 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000381 282.0
DYD3_k127_193082_11 Helix-hairpin-helix domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000847 287.0
DYD3_k127_193082_12 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000274 261.0
DYD3_k127_193082_13 Serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000005148 180.0
DYD3_k127_193082_14 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K15727 - - 0.0000000000000000000000000000000003305 145.0
DYD3_k127_193082_15 Domain of unknown function (DUF3943) - - - 0.00000000000000000000000000000003527 142.0
DYD3_k127_193082_16 - - - - 0.0000000000000000000000000000004949 127.0
DYD3_k127_193082_17 OsmC-like protein - - - 0.0000000000000000000000000001434 130.0
DYD3_k127_193082_18 IMP dehydrogenase activity K04767 - - 0.0000000000000000000000000005989 120.0
DYD3_k127_193082_19 Universal stress protein family - - - 0.00000000000000000000000004447 113.0
DYD3_k127_193082_2 Domain present in PSD-95, Dlg, and ZO-1/2. K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 447.0
DYD3_k127_193082_20 Uncharacterised ACR, YagE family COG1723 - - - 0.000000000000000004433 98.0
DYD3_k127_193082_21 HEAT repeats - - - 0.000000000001137 78.0
DYD3_k127_193082_22 Tetratricopeptide repeat - - - 0.0000001389 61.0
DYD3_k127_193082_23 Protein of unknown function (DUF2892) - - - 0.00001985 54.0
DYD3_k127_193082_3 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003906 452.0
DYD3_k127_193082_4 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 376.0
DYD3_k127_193082_5 beta-ketoacyl-acyl-carrier-protein synthase III activity K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003439 353.0
DYD3_k127_193082_6 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006524 344.0
DYD3_k127_193082_7 HTH domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005323 321.0
DYD3_k127_193082_8 TIGRFAM efflux transporter, RND family, MFP subunit K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005106 332.0
DYD3_k127_193082_9 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005626 315.0
DYD3_k127_1933504_0 Domain of unknown function (DUF362) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006661 569.0
DYD3_k127_1933504_1 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002169 554.0
DYD3_k127_1933504_2 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000001792 145.0
DYD3_k127_1940726_0 Glycosyl hydrolase family 65, C-terminal domain - - - 0.0 1029.0
DYD3_k127_1940726_1 mannose-ethanolamine phosphotransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001737 608.0
DYD3_k127_1940726_2 Calcineurin-like phosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005527 353.0
DYD3_k127_1940726_3 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000001024 245.0
DYD3_k127_1940726_4 Domain of unknown function DUF302 - - - 0.00000000000000000000000000000000000000009141 154.0
DYD3_k127_1940726_5 - - - - 0.000000000000000000000000000000000002377 150.0
DYD3_k127_1940726_6 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.0000000000000000000000000000007996 124.0
DYD3_k127_1940726_7 Short C-terminal domain - - - 0.000001357 52.0
DYD3_k127_1956865_0 ABC transporter, ATP-binding protein - - - 2.235e-210 666.0
DYD3_k127_1956865_1 Phosphoglucomutase/phosphomannomutase, C-terminal domain K01840,K15778 - 5.4.2.2,5.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001409 479.0
DYD3_k127_1956865_2 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0032259,GO:0036009,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 2.1.1.297 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005952 304.0
DYD3_k127_1956865_3 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002313 304.0
DYD3_k127_1959425_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 2.597e-228 728.0
DYD3_k127_1959425_1 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005928 398.0
DYD3_k127_1959425_10 Belongs to the ompA family - - - 0.000000000004252 78.0
DYD3_k127_1959425_2 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002512 351.0
DYD3_k127_1959425_3 EAL domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000384 304.0
DYD3_k127_1959425_4 Redoxin - - - 0.000000000000000000000000000000000000000000000000000000000000000001282 235.0
DYD3_k127_1959425_5 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.0000000000000000000000000000000000000000000000005408 195.0
DYD3_k127_1959425_6 CAAX protease self-immunity K06177,K07052 - 5.4.99.28,5.4.99.29 0.000000000000000000000000000000000000000001489 169.0
DYD3_k127_1959425_7 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000191 126.0
DYD3_k127_1959425_8 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K13015 - 1.1.1.136 0.0000000000000000000001829 101.0
DYD3_k127_1969360_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 3.866e-221 724.0
DYD3_k127_1969360_1 SMART helicase c2 K03722 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009298 619.0
DYD3_k127_1969360_10 - - - - 0.00000000000000000000000000000000000000000003931 164.0
DYD3_k127_1969360_11 Belongs to the ompA family K03640 - - 0.00000000000000000000000000000000000184 147.0
DYD3_k127_1969360_17 PilZ domain - - - 0.000000000000000001596 89.0
DYD3_k127_1969360_19 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0000009454 51.0
DYD3_k127_1969360_2 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003377 447.0
DYD3_k127_1969360_21 Helix-turn-helix XRE-family like proteins - - - 0.000006386 53.0
DYD3_k127_1969360_22 Sterol carrier protein - - - 0.00001372 55.0
DYD3_k127_1969360_3 Belongs to the peptidase M16 family K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001875 383.0
DYD3_k127_1969360_4 AIR synthase related protein, N-terminal domain K01933 - 6.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 357.0
DYD3_k127_1969360_5 Involved in the TonB-independent uptake of proteins K03641 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002042 362.0
DYD3_k127_1969360_6 peptidylprolyl isomerase K03770 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000004678 265.0
DYD3_k127_1969360_7 MotA/TolQ/ExbB proton channel family K03562 - - 0.000000000000000000000000000000000000000000000000000000000000000009047 232.0
DYD3_k127_1969360_8 Biopolymer transport protein ExbD/TolR K03560 - - 0.00000000000000000000000000000000000000000000000000001629 191.0
DYD3_k127_1969360_9 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000002321 177.0
DYD3_k127_1976957_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0 1154.0
DYD3_k127_1976957_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 2.468e-210 674.0
DYD3_k127_1976957_10 Stigma-specific protein, Stig1 - - - 0.00000000000000001523 89.0
DYD3_k127_1976957_11 preprotein translocase subunit YajC K03210 - - 0.00000000145 64.0
DYD3_k127_1976957_2 single-stranded-DNA-specific exonuclease RecJ K07462 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001703 535.0
DYD3_k127_1976957_3 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007908 426.0
DYD3_k127_1976957_4 DegT/DnrJ/EryC1/StrS aminotransferase family K04127 - 5.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000147 400.0
DYD3_k127_1976957_5 ABC transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007474 360.0
DYD3_k127_1976957_6 ABC-type transport system involved in resistance to organic solvents periplasmic component K02067 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001781 338.0
DYD3_k127_1976957_7 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000001055 249.0
DYD3_k127_1976957_8 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000002937 156.0
DYD3_k127_1976957_9 Methyltransferase FkbM domain - - - 0.000000000000000000000000000000004657 141.0
DYD3_k127_1981187_0 PFAM Major Facilitator Superfamily K08191 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004359 560.0
DYD3_k127_1981187_1 Protein kinase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001905 476.0
DYD3_k127_1981187_10 EAL domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002246 279.0
DYD3_k127_1981187_11 Protein of unknown function (DUF1552) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001447 269.0
DYD3_k127_1981187_12 oxidoreductase activity K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003664 260.0
DYD3_k127_1981187_14 - - - - 0.000000000000000000000000000000000000000000000000000000000000000006778 241.0
DYD3_k127_1981187_15 Kelch motif - - - 0.000000000000000000000000000000000000000000000000000000000000002986 234.0
DYD3_k127_1981187_16 Protein of unknown function (DUF1565) - - - 0.000000000000000000000000000000000000000000000000000000000001794 228.0
DYD3_k127_1981187_17 protein heterodimerization activity - - - 0.000000000000000000000000000000000000001699 158.0
DYD3_k127_1981187_2 Alpha-tubulin suppressor and related RCC1 domain-containing - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003125 438.0
DYD3_k127_1981187_20 extracellular structure organization - GO:0003674,GO:0005198,GO:0005575,GO:0005576,GO:0008150,GO:0009987,GO:0010033,GO:0014070,GO:0016043,GO:0030198,GO:0030587,GO:0031012,GO:0031154,GO:0032502,GO:0042221,GO:0043062,GO:0044421,GO:0048856,GO:0050896,GO:0051703,GO:0051704,GO:0071840,GO:0080184,GO:0090702,GO:0099120,GO:1901700,GO:1902168,GO:1905395 - 0.000000000000000000001545 105.0
DYD3_k127_1981187_22 polygalacturonase activity - - - 0.0000000000000000005524 102.0
DYD3_k127_1981187_23 FHA domain - - - 0.000000000000000001681 96.0
DYD3_k127_1981187_24 DNA-templated transcription, initiation K03088 GO:0000988,GO:0000990,GO:0002791,GO:0003674,GO:0006355,GO:0006950,GO:0008150,GO:0009266,GO:0009405,GO:0009408,GO:0009628,GO:0009889,GO:0010468,GO:0010556,GO:0010565,GO:0016987,GO:0019216,GO:0019217,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0032879,GO:0032880,GO:0043254,GO:0044087,GO:0044419,GO:0050708,GO:0050789,GO:0050794,GO:0050896,GO:0051046,GO:0051049,GO:0051128,GO:0051171,GO:0051223,GO:0051252,GO:0051704,GO:0060255,GO:0062012,GO:0065007,GO:0070201,GO:0080090,GO:0090087,GO:0140110,GO:1903506,GO:1903530,GO:2000112,GO:2000142,GO:2001141 - 0.00000000000000002749 90.0
DYD3_k127_1981187_25 Tetratricopeptide repeat - - - 0.0000000000000007347 91.0
DYD3_k127_1981187_26 histidine kinase A domain protein K02482 - 2.7.13.3 0.000000000000001191 83.0
DYD3_k127_1981187_27 Amb_all K01728 - 4.2.2.2 0.0000000000002775 81.0
DYD3_k127_1981187_28 Glycosyl hydrolase family 59 - - - 0.0000008985 60.0
DYD3_k127_1981187_29 Low-density lipoprotein receptor domain class A - - - 0.0001887 52.0
DYD3_k127_1981187_3 Kazal type serine protease inhibitors - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 402.0
DYD3_k127_1981187_4 Protein of unknown function (DUF1592) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000511 407.0
DYD3_k127_1981187_5 Enoyl-(Acyl carrier protein) reductase K00065 - 1.1.1.127 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004466 358.0
DYD3_k127_1981187_6 Glycosyl hydrolases family 16 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000315 351.0
DYD3_k127_1981187_7 phosphoprotein phosphatase activity K07313 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007468 331.0
DYD3_k127_1981187_8 enzyme involved in inositol metabolism K03337 - 5.3.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 314.0
DYD3_k127_1981187_9 Pectate lyase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002971 282.0
DYD3_k127_1989600_0 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 7.556e-241 767.0
DYD3_k127_1989600_1 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 9.897e-208 662.0
DYD3_k127_1989600_10 Belongs to the peptidase M24B family K01262,K01271 - 3.4.11.9,3.4.13.9 0.0000000000000000007642 90.0
DYD3_k127_1989600_11 Filamentation induced by cAMP protein fic - - - 0.000000000000001074 80.0
DYD3_k127_1989600_13 23S rRNA-intervening sequence protein - - - 0.0000000000000815 79.0
DYD3_k127_1989600_14 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.0000000003493 72.0
DYD3_k127_1989600_2 protein conserved in bacteria K09930 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002521 374.0
DYD3_k127_1989600_3 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 - 2.7.7.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002442 336.0
DYD3_k127_1989600_4 Uncharacterised protein family (UPF0158) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007591 290.0
DYD3_k127_1989600_5 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796,K13941 - 2.5.1.15,2.7.6.3 0.00000000000000000000000000000000000000000000000000000000000000000000000004993 259.0
DYD3_k127_1989600_6 YbbR-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000001647 235.0
DYD3_k127_1989600_8 Putative DNA-binding domain - - - 0.00000000000000000000000000000000000481 153.0
DYD3_k127_1989600_9 - - - - 0.000000000000000000000000000000002866 142.0
DYD3_k127_2011933_0 GTP-binding protein K06207 - - 6.568e-266 831.0
DYD3_k127_2011933_1 Methyltransferase type 11 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006811 246.0
DYD3_k127_2011933_2 - - - - 0.000000000000000000000000000000000000000000002422 179.0
DYD3_k127_2011933_3 protein domain, possibly involved in tellurite resistance - - - 0.0000000000000000000000000000000000000000001054 163.0
DYD3_k127_2011933_4 pyrroloquinoline quinone binding - - - 0.0000000000000000000000000000000000001265 161.0
DYD3_k127_2011933_5 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04565 - 1.15.1.1 0.000000000000000000000000000000000008338 143.0
DYD3_k127_2014523_0 AbgT putative transporter family K12942 - - 3.147e-235 737.0
DYD3_k127_2014523_1 long-chain fatty acid transporting porin activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002648 386.0
DYD3_k127_2014523_10 cell redox homeostasis - - - 0.00000000000000000000004363 108.0
DYD3_k127_2014523_11 positive regulation of acetylcholine metabolic process K06910 GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 - 0.000000000000000001724 93.0
DYD3_k127_2014523_12 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000003956 78.0
DYD3_k127_2014523_13 Sigma-70, region 4 - - - 0.000000000004383 74.0
DYD3_k127_2014523_14 Domain of unknown function (DUF4880) K07165 - - 0.000000002271 69.0
DYD3_k127_2014523_2 Belongs to the glycosyl hydrolase family 6 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001565 353.0
DYD3_k127_2014523_3 Protein kinase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003651 342.0
DYD3_k127_2014523_4 A domain family that is part of the cupin metalloenzyme superfamily. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003693 301.0
DYD3_k127_2014523_5 Evidence 5 No homology to any previously reported sequences - - - 0.000000000000000000000000000000000000000000000000000000000001744 231.0
DYD3_k127_2014523_6 long-chain fatty acid transporting porin activity K07267 - - 0.000000000000000000000000000000000000000001054 175.0
DYD3_k127_2014523_7 - - - - 0.000000000000000000000000000000000000000001163 175.0
DYD3_k127_2014523_8 Flavin containing amine oxidoreductase K21677 - 1.17.8.1 0.00000000000000000000000000000000000000003641 168.0
DYD3_k127_2014523_9 Belongs to the glycosyl hydrolase family 6 - - - 0.00000000000000000000000000002127 136.0
DYD3_k127_2020942_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 - 6.3.5.3 0.0 1527.0
DYD3_k127_2020942_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001642 511.0
DYD3_k127_2020942_10 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000002455 223.0
DYD3_k127_2020942_11 pathogenesis - - - 0.0000000000000000000000000000000000000000000000000000000000003187 222.0
DYD3_k127_2020942_12 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000002334 178.0
DYD3_k127_2020942_13 Transcriptional - - - 0.0000000000000000000000000000001006 130.0
DYD3_k127_2020942_14 Ferric uptake regulator family K09825 - - 0.000000000000000000000000006465 115.0
DYD3_k127_2020942_15 Domain of unknown function (DUF4398) - - - 0.0000000000001701 75.0
DYD3_k127_2020942_16 ATP-binding region ATPase domain protein - - - 0.0000000004433 69.0
DYD3_k127_2020942_17 AhpC/TSA family - - - 0.00000001408 61.0
DYD3_k127_2020942_18 - - - - 0.00001284 57.0
DYD3_k127_2020942_2 Membrane bound O-acyl transferase MBOAT family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003707 437.0
DYD3_k127_2020942_3 PAS fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000439 385.0
DYD3_k127_2020942_4 Bacterial regulatory helix-turn-helix protein, lysR family K04761 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001635 350.0
DYD3_k127_2020942_5 Membrane protein, TerC - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 301.0
DYD3_k127_2020942_6 Inositol monophosphatase family K01092,K05602 - 3.1.3.15,3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000002425 274.0
DYD3_k127_2020942_7 Belongs to the Dps family K04047 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000156 248.0
DYD3_k127_2020942_8 Domain of unknown function (DUF4398) - - - 0.000000000000000000000000000000000000000000000000000000000000000000001241 252.0
DYD3_k127_2020942_9 DNA alkylation repair enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000001931 233.0
DYD3_k127_2028672_0 TamB, inner membrane protein subunit of TAM complex K09800 - - 1.273e-300 969.0
DYD3_k127_2028672_1 - - - - 0.00001606 54.0
DYD3_k127_2028672_2 DNA recombination-mediator protein A K04096 - - 0.00006005 55.0
DYD3_k127_2051594_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 9.125e-280 872.0
DYD3_k127_2051594_1 Phosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000008137 216.0
DYD3_k127_2051594_2 Lamin Tail Domain K07004 - - 0.00000000000000000000000000004687 130.0
DYD3_k127_2051594_3 - - - - 0.000008414 57.0
DYD3_k127_2062233_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 2352.0
DYD3_k127_2062233_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 1497.0
DYD3_k127_2062233_10 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002688 278.0
DYD3_k127_2062233_11 SMART serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008076 288.0
DYD3_k127_2062233_12 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.00000000000000000000000000000000000000000000000000000000000000008127 236.0
DYD3_k127_2062233_13 Belongs to the bacterial histone-like protein family K05788 - - 0.0000000000000000000000000000000000000000000000000001809 186.0
DYD3_k127_2062233_14 Gaf domain - - - 0.00000000000000000000000000000000000000000000000002045 201.0
DYD3_k127_2062233_15 Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.00000000000000000000000000000000000000000000002102 178.0
DYD3_k127_2062233_16 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000002326 177.0
DYD3_k127_2062233_17 Transcriptional regulator, CarD family K07736 - - 0.000000000000000000000000000000000000000005415 162.0
DYD3_k127_2062233_18 4 iron, 4 sulfur cluster binding K05524 GO:0001666,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0008150,GO:0009605,GO:0009607,GO:0009628,GO:0036293,GO:0043207,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0070482,GO:0075136 - 0.0000000000000000000000000001466 122.0
DYD3_k127_2062233_2 phosphoenolpyruvate carboxykinase (diphosphate) activity K20370 GO:0003674,GO:0003824,GO:0004611,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0009987,GO:0016043,GO:0016829,GO:0016830,GO:0016831,GO:0022607,GO:0030585,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0051259,GO:0051291,GO:0065003,GO:0070206,GO:0070208,GO:0071840 4.1.1.38 0.0 1439.0
DYD3_k127_2062233_20 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008773,GO:0016020,GO:0016740,GO:0016772,GO:0016779,GO:0030312,GO:0044464,GO:0070566,GO:0070569,GO:0071944,GO:0140096 2.7.7.59 0.00000003856 64.0
DYD3_k127_2062233_21 - - - - 0.00001898 52.0
DYD3_k127_2062233_3 HD domain - - - 8.452e-229 718.0
DYD3_k127_2062233_4 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008173 545.0
DYD3_k127_2062233_5 oligosaccharyl transferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002168 537.0
DYD3_k127_2062233_6 cytochrome C peroxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001747 468.0
DYD3_k127_2062233_7 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000185 420.0
DYD3_k127_2062233_8 Peptidase family M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 410.0
DYD3_k127_2092063_0 Belongs to the glycosyl hydrolase family 6 K19355 - 3.2.1.78 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007231 385.0
DYD3_k127_2092063_1 deaminase K01493 - 3.5.4.12 0.000000000000000000000000000000000000000000000000000000000000000008583 230.0
DYD3_k127_2092063_2 FecR protein - - - 0.00000000000000000000000000000000000000000000000000000000000003595 231.0
DYD3_k127_2092063_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000008295 176.0
DYD3_k127_2092063_5 - - - - 0.00000000002955 69.0
DYD3_k127_20950_0 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) K01214 - 3.2.1.68 1.51e-321 998.0
DYD3_k127_20950_1 synthase K06044 - 5.4.99.15 2.187e-304 957.0
DYD3_k127_20950_10 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000005832 71.0
DYD3_k127_20950_11 PFAM Smr protein MutS2 - - - 0.0000000002906 70.0
DYD3_k127_20950_2 TIGRFAM malto-oligosyltrehalose trehalohydrolase K01236 - 3.2.1.141 1.677e-212 679.0
DYD3_k127_20950_3 DNA RNA helicase - - - 2.968e-207 670.0
DYD3_k127_20950_4 Aminotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009341 587.0
DYD3_k127_20950_5 PFAM NAD dependent epimerase dehydratase family K12454 - 5.1.3.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 414.0
DYD3_k127_20950_6 Carbohydrate family 9 binding domain-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000398 327.0
DYD3_k127_20950_7 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002026 313.0
DYD3_k127_20950_8 PFAM glycosyl transferase group 1 K12995,K13668 - 2.4.1.346,2.4.1.348 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002309 289.0
DYD3_k127_20950_9 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.00000000000000000000000000000000000000000005464 182.0
DYD3_k127_2098073_0 bacterial-type flagellum organization - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001824 252.0
DYD3_k127_2098073_1 Rhs family - - - 0.000000000000000000000000003196 118.0
DYD3_k127_2098265_0 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001948 359.0
DYD3_k127_2098265_1 dehydrogenase reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 344.0
DYD3_k127_2098265_2 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000001216 209.0
DYD3_k127_2098265_3 A domain family that is part of the cupin metalloenzyme superfamily. K18850 - 1.14.11.47 0.00000000000000000000000000000000000008083 157.0
DYD3_k127_211510_0 OmpA family K02557 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001569 282.0
DYD3_k127_211510_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000002059 154.0
DYD3_k127_211510_2 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000006636 84.0
DYD3_k127_211510_3 Protein of unknown function (DUF1109) - - - 0.0001936 52.0
DYD3_k127_2140945_0 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by K00053 - 1.1.1.86 3.179e-208 676.0
DYD3_k127_2140945_1 4Fe-4S single cluster domain K06937 - - 6.227e-205 658.0
DYD3_k127_2140945_10 von Willebrand factor, type A K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000008423 256.0
DYD3_k127_2140945_11 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.000000000000000000000000000000000000000000000000000000000000000000000009707 250.0
DYD3_k127_2140945_12 Protein of unknown function (DUF1592) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005321 263.0
DYD3_k127_2140945_13 Protein of unknown function (DUF1552) - - - 0.00000000000000000000000000000000000000000000000000000000000000000002446 250.0
DYD3_k127_2140945_14 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 - 3.6.1.54 0.00000000000000000000000000000000000000000000000000000006498 211.0
DYD3_k127_2140945_15 PFAM Metal-dependent hydrolase HDOD - - - 0.0000000000000000000000000000000000000000000000000001612 204.0
DYD3_k127_2140945_16 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.00000000000000000000000000000000000000000000000796 186.0
DYD3_k127_2140945_17 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 - - 0.0000000000000000000000000000000000000000000359 167.0
DYD3_k127_2140945_18 Methyltransferase K00567 - 2.1.1.63 0.00000000000000000000000000004672 124.0
DYD3_k127_2140945_19 CmpX protein - - - 0.000000000000000000002034 108.0
DYD3_k127_2140945_2 Flavin containing amine oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 605.0
DYD3_k127_2140945_20 Belongs to the glycosyl hydrolase 5 (cellulase A) family K01179 - 3.2.1.4 0.000000000000001337 81.0
DYD3_k127_2140945_22 PA14 domain - GO:0005575,GO:0005576 - 0.00000000006346 75.0
DYD3_k127_2140945_23 Acts as a magnesium transporter K06213 - - 0.0000000002577 73.0
DYD3_k127_2140945_3 FGGY family of carbohydrate kinases, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 517.0
DYD3_k127_2140945_4 cytochrome C peroxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008557 418.0
DYD3_k127_2140945_5 Glycosyl transferase family 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005145 333.0
DYD3_k127_2140945_6 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004568 313.0
DYD3_k127_2140945_7 Acts as a magnesium transporter K06213 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005344 299.0
DYD3_k127_2140945_8 LysR substrate binding domain K02521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001638 267.0
DYD3_k127_2140945_9 von Willebrand factor, type A K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001944 261.0
DYD3_k127_2158756_0 E1-E2 ATPase K12955 - - 5.712e-320 1032.0
DYD3_k127_2158756_1 AAA ATPase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002578 640.0
DYD3_k127_2158756_10 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002778 278.0
DYD3_k127_2158756_11 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003196 250.0
DYD3_k127_2158756_12 PFAM Cytochrome C - - - 0.00000000000000000000000000000000000000000000000000000000000003219 226.0
DYD3_k127_2158756_13 Histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000004802 203.0
DYD3_k127_2158756_14 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 0.00000000000000000000000000000000000000000000000000004228 190.0
DYD3_k127_2158756_15 Transcriptional regulator PadR-like family - - - 0.0000000000000000000000000000000000000000000000000007058 190.0
DYD3_k127_2158756_16 PHB/PHA accumulation regulator DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000002169 183.0
DYD3_k127_2158756_17 Putative zinc-finger - - - 0.000000000000000000000000000000000000000000000757 184.0
DYD3_k127_2158756_18 Phospholipid methyltransferase - - - 0.000000000000000000000000000005679 136.0
DYD3_k127_2158756_19 Domain of Unknown Function (DUF1206) - - - 0.000000000000000000000000000008327 130.0
DYD3_k127_2158756_2 KaiC K08482 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 524.0
DYD3_k127_2158756_20 response regulator K02481,K07713 - - 0.000000000000000000000000001047 122.0
DYD3_k127_2158756_21 FHA domain - - - 0.000000000000001695 81.0
DYD3_k127_2158756_24 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07715 - - 0.0000000157 63.0
DYD3_k127_2158756_25 Specific class of high-redox-potential 4Fe-4S ferredoxins. Functions in anaerobic electron transport in most purple and in some other photosynthetic bacteria and in at least one genus (Paracoccus) of halophilic, denitrifying bacteria - - - 0.000002056 54.0
DYD3_k127_2158756_26 - - - - 0.000003532 55.0
DYD3_k127_2158756_27 SseB protein N-terminal domain - - - 0.00001137 57.0
DYD3_k127_2158756_28 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000102 55.0
DYD3_k127_2158756_3 Belongs to the peptidase S33 family K01259 - 3.4.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002346 505.0
DYD3_k127_2158756_4 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002051 400.0
DYD3_k127_2158756_5 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 355.0
DYD3_k127_2158756_6 gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 364.0
DYD3_k127_2158756_7 Tetraprenyl-beta-curcumene synthase K16188 - 4.2.3.130 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002577 338.0
DYD3_k127_2158756_8 Phosphate acyltransferases K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001673 291.0
DYD3_k127_2158756_9 Nitrate and nitrite sensing K03407 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000272 292.0
DYD3_k127_2170086_0 Phosphomethylpyrimidine kinase K00941,K14153,K21219 - 2.5.1.3,2.7.1.49,2.7.4.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003147 317.0
DYD3_k127_2170086_1 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002606 282.0
DYD3_k127_2170086_2 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000002492 248.0
DYD3_k127_2170086_4 Stigma-specific protein, Stig1 - - - 0.00001215 53.0
DYD3_k127_2173738_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K01834 - 5.4.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 359.0
DYD3_k127_2173738_1 Polysaccharide deacetylase K22278 - 3.5.1.104 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009791 302.0
DYD3_k127_2173738_2 carboxylic ester hydrolase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000003139 240.0
DYD3_k127_2173738_3 protein trimerization K06894,K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000006675 250.0
DYD3_k127_2173738_4 - - - - 0.00000001963 68.0
DYD3_k127_2212261_0 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 GO:0003674,GO:0003824,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001913 380.0
DYD3_k127_2212261_1 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000002054 224.0
DYD3_k127_2212261_2 3-demethylubiquinone-9 3-methyltransferase - - - 0.00000000000000000000000000000000000000000000001943 176.0
DYD3_k127_2212261_3 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.000000000000000000000000000000000000000002596 168.0
DYD3_k127_2212261_4 Family membership K08884 - 2.7.11.1 0.000000000000000000000007071 104.0
DYD3_k127_2220902_0 Tetratricopeptide repeat - - - 0.0 3304.0
DYD3_k127_2220902_1 Glycosyl hydrolase family 63 C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006889 484.0
DYD3_k127_2220902_10 Permease MlaE K02066 - - 0.00000000000000000000000000000000431 139.0
DYD3_k127_2220902_11 PFAM ABC transporter related K02065 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0008144,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.0000000000000000000000000001311 124.0
DYD3_k127_2220902_13 - - - - 0.000000003604 68.0
DYD3_k127_2220902_14 pathogenesis - - - 0.00000005791 65.0
DYD3_k127_2220902_2 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 475.0
DYD3_k127_2220902_3 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001353 421.0
DYD3_k127_2220902_4 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002383 418.0
DYD3_k127_2220902_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009248 351.0
DYD3_k127_2220902_6 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 312.0
DYD3_k127_2220902_7 Aminotransferase K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001055 275.0
DYD3_k127_2220902_8 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000003216 256.0
DYD3_k127_2220902_9 Phosphate acyltransferases K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000003073 196.0
DYD3_k127_2222396_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 1.71e-314 974.0
DYD3_k127_2222396_1 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02652 - - 2.113e-244 766.0
DYD3_k127_2222396_10 - - - - 0.000000000000000000000008867 109.0
DYD3_k127_2222396_11 peptidyl-tyrosine sulfation - - - 0.00000000000000000000002632 115.0
DYD3_k127_2222396_2 endonuclease exonuclease phosphatase K07004 - - 4.471e-226 734.0
DYD3_k127_2222396_3 domain protein K21147 - 2.7.7.80,2.8.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003224 608.0
DYD3_k127_2222396_4 twitching motility protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001451 563.0
DYD3_k127_2222396_5 Cell division protein FtsI penicillin-binding protein 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004657 273.0
DYD3_k127_2222396_6 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000145 248.0
DYD3_k127_2222396_7 PAP2 superfamily - - - 0.000000000000000000000000000000000000000000000000000000009474 211.0
DYD3_k127_2222396_8 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.00000000000000000000000000000000000000000000000004182 189.0
DYD3_k127_224118_0 Domain of unknown function (DUF3488) - - - 4.103e-232 741.0
DYD3_k127_224118_1 Converts alpha-aldose to the beta-anomer K01785 - 5.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008783 531.0
DYD3_k127_224118_10 Zn peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001205 265.0
DYD3_k127_224118_11 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000004424 223.0
DYD3_k127_224118_12 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000464 205.0
DYD3_k127_224118_13 ABC transporter K02193 - 3.6.3.41 0.000000000000000000000000000000000000000000000000000007014 200.0
DYD3_k127_224118_14 Protein of unknown function, DUF488 - - - 0.00000000000000000000000000000000000003372 155.0
DYD3_k127_224118_15 Prephenate dehydrogenase K04517 - 1.3.1.12 0.0000000000000000000000000000001801 137.0
DYD3_k127_224118_16 Protein of unknown function (DUF1587) - - - 0.0000000000000000000000000007845 127.0
DYD3_k127_224118_17 PFAM DAHP synthetase I K03856 - 2.5.1.54 0.00000000000000000004973 100.0
DYD3_k127_224118_18 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000331 94.0
DYD3_k127_224118_19 PilZ domain - - - 0.00000000000000002867 91.0
DYD3_k127_224118_2 Belongs to the binding-protein-dependent transport system permease family K02057,K10440 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004312 534.0
DYD3_k127_224118_20 - - - - 0.00051 51.0
DYD3_k127_224118_3 Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system K10441 - 3.6.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002691 493.0
DYD3_k127_224118_4 (ABC) transporter K10439 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 474.0
DYD3_k127_224118_5 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 470.0
DYD3_k127_224118_6 Protein of unknown function DUF58 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002713 440.0
DYD3_k127_224118_7 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002272 405.0
DYD3_k127_224118_8 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004075 280.0
DYD3_k127_224118_9 aldo keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001226 279.0
DYD3_k127_2244727_0 Thioredoxin-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000009629 233.0
DYD3_k127_2244727_1 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000000000000000000000000000009315 205.0
DYD3_k127_2244727_2 NUDIX domain - - - 0.00000000000000000000000000000000872 132.0
DYD3_k127_2244727_3 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain - - - 0.00000000000000000000000000000002464 136.0
DYD3_k127_2244727_4 Domain of unknown function (DUF4440) - - - 0.000000000000000000000000000001152 127.0
DYD3_k127_2244727_5 TIGRFAM periplasmic serine protease, Do DeqQ family K04771 - 3.4.21.107 0.0004734 47.0
DYD3_k127_2250192_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787,K15726 - - 0.0 1576.0
DYD3_k127_2250192_1 MMPL family K18138 - - 0.0 1449.0
DYD3_k127_2250192_10 With LivFGHM is involved in the high affinity leucine transport K01999 - - 0.000000000000000000000000000000000000004559 162.0
DYD3_k127_2250192_11 cheY-homologous receiver domain K03413 - - 0.0000000000000000000000000000001232 128.0
DYD3_k127_2250192_12 FecR protein - - - 0.00000000000000000002776 104.0
DYD3_k127_2250192_14 X-Pro dipeptidyl-peptidase (S15 family) - - - 0.00000000000000058 89.0
DYD3_k127_2250192_15 DNA-templated transcription, initiation K03088 - - 0.000000001874 68.0
DYD3_k127_2250192_16 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.00000003199 62.0
DYD3_k127_2250192_17 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.00000414 61.0
DYD3_k127_2250192_18 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.00005475 52.0
DYD3_k127_2250192_2 TonB dependent receptor K02014 - - 3.159e-249 790.0
DYD3_k127_2250192_3 COG0659 Sulfate permease and related transporters (MFS superfamily) K01673,K03321 - 4.2.1.1 9.624e-202 644.0
DYD3_k127_2250192_4 Pfam:HipA_N K07154 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000783 424.0
DYD3_k127_2250192_5 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00001 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003824 370.0
DYD3_k127_2250192_6 Biotin-lipoyl like K03585,K07799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 344.0
DYD3_k127_2250192_7 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008649 307.0
DYD3_k127_2250192_8 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K15727 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 284.0
DYD3_k127_2250192_9 carbohydrate transport K02027 - - 0.000000000000000000000000000000000000000000000000000000006567 218.0
DYD3_k127_2255854_0 Domain of unknown function (DUF4920) - - - 0.00000000000000000000000000000000001165 143.0
DYD3_k127_2255854_2 - - - - 0.00000000000509 78.0
DYD3_k127_2255854_3 Tetratricopeptide repeat - - - 0.0007333 52.0
DYD3_k127_2279268_0 negative regulation of DNA recombination K07456 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005889 471.0
DYD3_k127_2279268_1 hydrolase, family 9 K01179 - 3.2.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001961 423.0
DYD3_k127_2279268_2 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007147 310.0
DYD3_k127_2279268_3 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767,K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009917 301.0
DYD3_k127_2279268_4 alpha-L-arabinofuranosidase K00694,K15531,K20542 - 2.4.1.12,3.2.1.156,3.2.1.4 0.00000000000000000000000000000000000000000000000000000000000000001478 249.0
DYD3_k127_2279268_5 LysM domain protein K07261 - - 0.000000000000000000000000000000000000000000000000000006793 194.0
DYD3_k127_2279268_6 Protein of unknown function (DUF3105) - - - 0.000000000000000000000000000000002129 139.0
DYD3_k127_2279268_7 peptidase S9A prolyl oligopeptidase domain protein beta-propeller K01322 - 3.4.21.26 0.000000000000000000000005684 105.0
DYD3_k127_2279268_8 - - - - 0.0000000007706 70.0
DYD3_k127_2286276_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1289.0
DYD3_k127_2286276_1 serine threonine protein kinase - - - 9.541e-304 981.0
DYD3_k127_2286276_2 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001605 536.0
DYD3_k127_2286276_3 Outer membrane efflux protein K12340 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001236 263.0
DYD3_k127_2286276_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K18302 - - 0.00000000000000000000000000000000000000000000000000000000000006601 231.0
DYD3_k127_2286276_5 Histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000002652 195.0
DYD3_k127_2362484_0 Domain of unknown function (DUF5110) K01811 - 3.2.1.177 1.432e-258 820.0
DYD3_k127_2362484_1 response regulator K02481,K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004562 565.0
DYD3_k127_2362484_10 amine dehydrogenase activity - - - 0.000000000000003037 90.0
DYD3_k127_2362484_11 amino acid activation for nonribosomal peptide biosynthetic process K05996 - 3.4.17.18 0.0000000000002198 83.0
DYD3_k127_2362484_12 regulation of canonical Wnt signaling pathway involved in osteoblast differentiation - - - 0.0002109 54.0
DYD3_k127_2362484_13 peptidyl-tyrosine sulfation - - - 0.0006951 52.0
DYD3_k127_2362484_2 Phosphotransferase enzyme family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 409.0
DYD3_k127_2362484_3 Serine Threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000003715 244.0
DYD3_k127_2362484_4 Adenylylsulfate kinase K00860 - 2.7.1.25 0.000000000000000000000000000000000000000000001781 179.0
DYD3_k127_2362484_5 Protoglobin - - - 0.0000000000000000000000000000000000000008931 162.0
DYD3_k127_2362484_6 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000000001715 151.0
DYD3_k127_2362484_7 acid phosphatase activity - - - 0.000000000000000000000000000000000002682 157.0
DYD3_k127_2362484_8 Universal stress protein - - - 0.000000000000000000000000000000009863 139.0
DYD3_k127_2362484_9 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 - 0.0000000000000000000000000004576 117.0
DYD3_k127_238618_0 penicillin-binding protein K03587 - 3.4.16.4 3.913e-251 792.0
DYD3_k127_238618_1 Catalyzes the conversion of L-arabinose to L-ribulose K01804 - 5.3.1.4 1.79e-239 749.0
DYD3_k127_238618_10 Belongs to the SEDS family K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 468.0
DYD3_k127_238618_11 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005356 472.0
DYD3_k127_238618_12 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008765,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000895 417.0
DYD3_k127_238618_13 Surface antigen K07277,K07278 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008522 403.0
DYD3_k127_238618_14 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004732 367.0
DYD3_k127_238618_15 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006096 336.0
DYD3_k127_238618_16 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001998 364.0
DYD3_k127_238618_17 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001464 350.0
DYD3_k127_238618_18 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002923 301.0
DYD3_k127_238618_19 Alpha-L-arabinofuranosidase B, catalytic K20844 - 3.2.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001516 287.0
DYD3_k127_238618_2 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 7.559e-238 751.0
DYD3_k127_238618_20 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005772 261.0
DYD3_k127_238618_22 Diadenosine tetraphosphatase and related serine threonine protein phosphatases K07313 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000000000000005019 235.0
DYD3_k127_238618_23 Cell division protein FtsQ K03589 - - 0.0000000000000000000000000000000000000000000000000000000000008247 222.0
DYD3_k127_238618_24 Belongs to the glycosyl hydrolase 8 (cellulase D) family - - - 0.000000000000000000000000000000000000000000000000000000001136 222.0
DYD3_k127_238618_25 Belongs to the MraZ family K03925 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.000000000000000000000000000000000000000000000000001136 186.0
DYD3_k127_238618_26 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000000000000000000009618 151.0
DYD3_k127_238618_27 - - - - 0.0000000000000000000000000000000004104 142.0
DYD3_k127_238618_29 Class II Aldolase and Adducin N-terminal domain K03077 - 5.1.3.4 0.000000000000000000000000007956 111.0
DYD3_k127_238618_3 Belongs to the MurCDEF family K01924 - 6.3.2.8 3.915e-217 682.0
DYD3_k127_238618_31 23S rRNA-intervening sequence protein - - - 0.00000000000000000000008732 101.0
DYD3_k127_238618_34 BetI-type transcriptional repressor, C-terminal - - - 0.000002642 58.0
DYD3_k127_238618_4 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 5.931e-204 643.0
DYD3_k127_238618_5 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000263 526.0
DYD3_k127_238618_6 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 527.0
DYD3_k127_238618_7 helix_turn _helix lactose operon repressor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004089 488.0
DYD3_k127_238618_8 vancomycin resistance protein K18346 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009561 496.0
DYD3_k127_238618_9 cell adhesion involved in biofilm formation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001672 509.0
DYD3_k127_2441087_0 TonB-dependent Receptor Plug Domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000072 553.0
DYD3_k127_2462956_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 1.783e-229 724.0
DYD3_k127_2462956_1 Mur ligase family, catalytic domain K02558 - 6.3.2.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004788 608.0
DYD3_k127_2462956_10 PFAM SEC-C motif domain protein K09858 - - 0.000000000000000000000000000000000000000000000000000000003129 203.0
DYD3_k127_2462956_11 Alpha/beta hydrolase family K06889 - - 0.0000000000000000000000000000000000000000000000000001373 199.0
DYD3_k127_2462956_12 surface antigen - - - 0.0000000000000000000000000000000000000000000000000003043 203.0
DYD3_k127_2462956_14 - - - - 0.000000000000000000000000000008576 131.0
DYD3_k127_2462956_16 Histidine kinase K02482 - 2.7.13.3 0.0000000000000000000000001064 112.0
DYD3_k127_2462956_17 PFAM RNA recognition motif - - - 0.000000000000000000000005857 104.0
DYD3_k127_2462956_18 COG2346, Truncated hemoglobins K06886 - - 0.0000000000000000000003027 103.0
DYD3_k127_2462956_2 Converts alpha-aldose to the beta-anomer K01785 - 5.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002364 495.0
DYD3_k127_2462956_20 alpha beta - - - 0.0000000000000003989 90.0
DYD3_k127_2462956_21 Carbohydrate family 9 binding domain-like - - - 0.0000002246 61.0
DYD3_k127_2462956_23 sarcosine oxidase K00301 - 1.5.3.1 0.0000428 51.0
DYD3_k127_2462956_24 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.0006241 51.0
DYD3_k127_2462956_3 Carbohydrate family 9 binding domain-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002308 417.0
DYD3_k127_2462956_4 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086,K03089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001969 395.0
DYD3_k127_2462956_5 PFAM Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000953 359.0
DYD3_k127_2462956_6 enterobactin catabolic process K07214 - - 0.00000000000000000000000000000000000000000000000000000000000000000001004 244.0
DYD3_k127_2462956_7 3D domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000001208 243.0
DYD3_k127_2462956_9 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.000000000000000000000000000000000000000000000000000000002351 209.0
DYD3_k127_2464804_0 repeat protein - - - 0.0 3120.0
DYD3_k127_2464804_1 FHA domain - - - 7.902e-285 889.0
DYD3_k127_2464804_2 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006812 276.0
DYD3_k127_2464804_3 adventurous gliding protein T - - - 0.000000000000000000000000000000000001424 146.0
DYD3_k127_2478591_0 von Willebrand factor type A domain - - - 1.604e-317 1007.0
DYD3_k127_2478591_1 Aerotolerance regulator N-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007691 566.0
DYD3_k127_2478591_2 pyrroloquinoline quinone binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007553 402.0
DYD3_k127_2478591_3 Protein conserved in bacteria - - - 0.0000000000000000000000000000000009072 139.0
DYD3_k127_2505339_0 Alpha-2-Macroglobulin K06894 - - 0.0 1477.0
DYD3_k127_2505339_1 PFAM Glutamyl glutaminyl-tRNA synthetase, class Ic, catalytic K01886 - 6.1.1.18 1.361e-219 691.0
DYD3_k127_2505339_10 PFAM Formylglycine-generating sulfatase enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001102 276.0
DYD3_k127_2505339_11 Response regulator receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002497 266.0
DYD3_k127_2505339_12 Histidine biosynthesis bifunctional protein HisIE K01496,K11755 - 3.5.4.19,3.6.1.31 0.000000000000000000000000000000000000000000000000000000000000000000003015 241.0
DYD3_k127_2505339_13 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000001252 211.0
DYD3_k127_2505339_14 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000006384 124.0
DYD3_k127_2505339_15 Cytidine and deoxycytidylate deaminase zinc-binding region K01489 - 3.5.4.5 0.00000000000000000000000000007809 128.0
DYD3_k127_2505339_16 - - - - 0.0000000000000000000000000002802 119.0
DYD3_k127_2505339_17 COG0823 Periplasmic component of the Tol biopolymer transport system - - - 0.00000000000000000000008271 115.0
DYD3_k127_2505339_18 deoxyhypusine monooxygenase activity - - - 0.000000000000000000000593 107.0
DYD3_k127_2505339_2 Transglycosylase K05367 - 2.4.1.129 1.453e-206 679.0
DYD3_k127_2505339_20 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.000000000000000006451 85.0
DYD3_k127_2505339_23 zinc-ribbon domain - - - 0.00000000000008013 84.0
DYD3_k127_2505339_25 Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na( ) movement across the membrane K15987 - 3.6.1.1 0.000006107 49.0
DYD3_k127_2505339_3 protein containing a von Willebrand factor type A (vWA) domain K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 530.0
DYD3_k127_2505339_4 RelA SpoT domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007562 504.0
DYD3_k127_2505339_5 Involved in the tonB-independent uptake of proteins K03641 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 531.0
DYD3_k127_2505339_6 Copper type II ascorbate-dependent monooxygenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006039 398.0
DYD3_k127_2505339_7 Cytochrome c554 and c-prime - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 402.0
DYD3_k127_2505339_8 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003067 290.0
DYD3_k127_2505339_9 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007136 281.0
DYD3_k127_2513044_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1135.0
DYD3_k127_2513044_1 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 452.0
DYD3_k127_2513044_2 Serine Threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 374.0
DYD3_k127_2513044_3 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005535 306.0
DYD3_k127_2516598_0 Poly3-Hydroxybutyrate Depolymerase K03932 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006882 382.0
DYD3_k127_2516598_1 Belongs to the ompA family K03286 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002647 329.0
DYD3_k127_2516598_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003427 302.0
DYD3_k127_2516598_4 Belongs to the glycosyl hydrolase 28 family K01184 - 3.2.1.15 0.000000000000000000000000000000000000000000000000000000000000000000475 246.0
DYD3_k127_2516598_5 iron ion homeostasis - - - 0.000000000000000000000000000000000000000000000000000000000000000001988 251.0
DYD3_k127_2516598_6 dienelactone hydrolase - - - 0.00000000000000000000000000000000000000000000000000000001922 212.0
DYD3_k127_2516598_8 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000004433 69.0
DYD3_k127_2516598_9 attachment of spindle microtubules to kinetochore involved in meiotic chromosome segregation - - - 0.00008059 54.0
DYD3_k127_2517427_0 IgA Peptidase M64 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008823 511.0
DYD3_k127_2517427_1 ATPase domain of DNA mismatch repair MUTS family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 444.0
DYD3_k127_2517427_10 Nucleotidyl transferase AbiEii toxin, Type IV TA system - - - 0.00000000006083 73.0
DYD3_k127_2517427_11 Peptidase family M48 - - - 0.0000004229 57.0
DYD3_k127_2517427_13 alpha-L-arabinofuranosidase - - - 0.00006033 56.0
DYD3_k127_2517427_2 4Fe-4S single cluster domain K06937 - - 0.00000000000000000000000000000000000000000000000000003078 190.0
DYD3_k127_2517427_3 - - - - 0.000000000000000000000000000000000000000000000006046 188.0
DYD3_k127_2517427_4 NAT, N-acetyltransferase, of N-acetylglutamate synthase K12659,K22478 - 1.2.1.38,2.3.1.1,2.7.2.8 0.0000000000000000000000000000000000000000000006697 183.0
DYD3_k127_2517427_5 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000000000000000000000000000000000000004168 184.0
DYD3_k127_2517427_7 Protein of unknown function (DUF533) K11962 - - 0.000000000000000443 83.0
DYD3_k127_2517427_9 PFAM Glycosyl hydrolase family 32 domain protein K01212,K18775 - 3.2.1.64,3.2.1.65 0.00000000005134 76.0
DYD3_k127_2546303_0 Putative glutamine amidotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 617.0
DYD3_k127_2546303_1 Heat shock 70 kDa protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009468 403.0
DYD3_k127_2546303_12 PFAM EAL domain - - - 0.0000000000000000000000000000000002443 142.0
DYD3_k127_2546303_13 FecR protein - - - 0.0000000000000008198 90.0
DYD3_k127_2546303_14 HEAT repeat - - - 0.00000000000001089 89.0
DYD3_k127_2546303_15 - - - - 0.00000000000001747 74.0
DYD3_k127_2546303_17 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000005857 58.0
DYD3_k127_2546303_18 - - - - 0.0001034 52.0
DYD3_k127_2546303_19 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.0001351 46.0
DYD3_k127_2546303_2 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005285 314.0
DYD3_k127_2546303_3 N-terminal double-transmembrane domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007791 254.0
DYD3_k127_2546303_4 deoxyhypusine monooxygenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000006547 260.0
DYD3_k127_2546303_6 Redoxin K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000975 193.0
DYD3_k127_2546303_8 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000000000000000000001313 179.0
DYD3_k127_2549980_0 PFAM FGGY family of carbohydrate kinases, N-terminal domain - - - 1.195e-215 681.0
DYD3_k127_2549980_1 PFAM glycoside hydrolase family 39 K01198 - 3.2.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005323 422.0
DYD3_k127_2549980_2 Class II Aldolase and Adducin N-terminal domain K03077 - 5.1.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 391.0
DYD3_k127_2549980_3 Alpha-L-arabinofuranosidase B, catalytic - - - 0.0000000000000000000000000000000000000000000000000000000195 207.0
DYD3_k127_2549980_4 4-amino-4-deoxy-L-arabinose transferase activity K02277 - 1.9.3.1 0.00000000000000000000000000000000000000000000000004612 198.0
DYD3_k127_2549980_5 Catalyzes the conversion of L-arabinose to L-ribulose K01804 - 5.3.1.4 0.0000000000000000000000000007984 113.0
DYD3_k127_2549980_6 L-iduronidase activity K01217 GO:0000323,GO:0000902,GO:0001501,GO:0003674,GO:0003824,GO:0003940,GO:0004553,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005773,GO:0005775,GO:0005975,GO:0005984,GO:0006022,GO:0006026,GO:0006027,GO:0006029,GO:0006082,GO:0006790,GO:0006807,GO:0006996,GO:0007033,GO:0007040,GO:0007275,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009100,GO:0009311,GO:0009653,GO:0009887,GO:0009987,GO:0016043,GO:0016054,GO:0016787,GO:0016798,GO:0017144,GO:0019538,GO:0019752,GO:0030135,GO:0030203,GO:0030204,GO:0030205,GO:0030207,GO:0030209,GO:0031410,GO:0031974,GO:0031982,GO:0032501,GO:0032502,GO:0032787,GO:0032989,GO:0035107,GO:0035108,GO:0042592,GO:0042737,GO:0043170,GO:0043202,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044262,GO:0044273,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0046395,GO:0048513,GO:0048705,GO:0048731,GO:0048736,GO:0048856,GO:0048869,GO:0048878,GO:0050654,GO:0050655,GO:0060173,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0071840,GO:0072329,GO:0080171,GO:0097708,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575,GO:1903510 3.2.1.76 0.00000003709 61.0
DYD3_k127_2555944_0 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002964 447.0
DYD3_k127_2555944_2 phosphatidate phosphatase activity K19302 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000001691 204.0
DYD3_k127_2555944_3 Domain of unknown function (DUF3943) - - - 0.00000000000000000000000000000000000000000003443 181.0
DYD3_k127_2555944_4 ATPases associated with a variety of cellular activities K02003 - - 0.000000000000000000000000000000000000002511 148.0
DYD3_k127_2555944_5 Domain of unknown function (DUF3943) - - - 0.000000000000000000007905 99.0
DYD3_k127_2555944_7 Ca2 -binding protein (EF-Hand superfamily - - - 0.00001705 54.0
DYD3_k127_2562901_0 aminotransferase K14287 - 2.6.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002317 491.0
DYD3_k127_2562901_1 N-6 DNA Methylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002303 472.0
DYD3_k127_2562901_2 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000054 447.0
DYD3_k127_2562901_3 Protein of unknown function (DUF1592) - - - 0.0000000000000000000000000000000000000000000000000000000003005 224.0
DYD3_k127_2562901_5 Protein of unknown function (DUF1552) - - - 0.00000000000000000000000000002982 135.0
DYD3_k127_2581081_0 ErfK ybiS ycfS ynhG family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001417 550.0
DYD3_k127_2581081_1 ABC-type uncharacterized transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001355 520.0
DYD3_k127_2581081_2 ABC transporter, ATP-binding protein K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 359.0
DYD3_k127_2581081_3 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004581 270.0
DYD3_k127_2581081_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000868 271.0
DYD3_k127_2581081_5 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.0000000000000000000000000000000000000000000000000000000002504 213.0
DYD3_k127_2581081_6 Glycosyl transferases group 1 K16703 - - 0.0000000000000000000006318 100.0
DYD3_k127_2587818_0 Family membership K08884 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008422 357.0
DYD3_k127_2587818_1 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003963 337.0
DYD3_k127_2587818_2 phosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 342.0
DYD3_k127_2587818_3 Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N- methyltransferase family K05931 GO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006325,GO:0006355,GO:0006464,GO:0006479,GO:0006807,GO:0006950,GO:0006970,GO:0006996,GO:0007275,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008469,GO:0008757,GO:0009628,GO:0009651,GO:0009791,GO:0009889,GO:0009891,GO:0009893,GO:0009909,GO:0009987,GO:0010035,GO:0010038,GO:0010228,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016043,GO:0016273,GO:0016274,GO:0016277,GO:0016569,GO:0016570,GO:0016571,GO:0016740,GO:0016741,GO:0018193,GO:0018195,GO:0018216,GO:0019219,GO:0019222,GO:0019538,GO:0019919,GO:0022414,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032259,GO:0032501,GO:0032502,GO:0034969,GO:0034970,GO:0034971,GO:0034972,GO:0035241,GO:0035242,GO:0035246,GO:0035247,GO:0036211,GO:0042054,GO:0042221,GO:0042802,GO:0042803,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0045893,GO:0045935,GO:0046686,GO:0046982,GO:0046983,GO:0048518,GO:0048522,GO:0048580,GO:0048583,GO:0048584,GO:0048608,GO:0048731,GO:0048831,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051239,GO:0051252,GO:0051254,GO:0051276,GO:0060255,GO:0061458,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0080134,GO:0140096,GO:1901564,GO:1902680,GO:1902882,GO:1902884,GO:1903506,GO:1903508,GO:2000026,GO:2000112,GO:2000241,GO:2001141 2.1.1.319 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001841 289.0
DYD3_k127_2587818_4 arylsulfatase activity - - - 0.00000000000000000000000000000000000000000000000000000000000001556 230.0
DYD3_k127_2587818_5 - - - - 0.0000000000000000000000000000001301 138.0
DYD3_k127_2592682_0 NAD binding K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000628 353.0
DYD3_k127_2592682_1 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001004 276.0
DYD3_k127_2592682_2 Forkhead associated domain - - - 0.0000000000000000000000000000000000000000000000000000001028 203.0
DYD3_k127_2592682_3 Forkhead associated domain - - - 0.0000000000000000000000000000000000000000000000000000005568 203.0
DYD3_k127_2592682_4 Forkhead associated domain - - - 0.00000000000000000009043 99.0
DYD3_k127_2592682_5 Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives - - - 0.000002422 58.0
DYD3_k127_2593049_0 beta-galactosidase activity K01192 - 3.2.1.25 4.236e-243 775.0
DYD3_k127_2593049_1 Fe-S oxidoreductases K22226 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007545 512.0
DYD3_k127_2593049_10 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.000000000000000000000000000000000000000000000000000001254 202.0
DYD3_k127_2593049_11 Fatty acid hydroxylase superfamily - - - 0.0000000000000000000000000000000000000001043 166.0
DYD3_k127_2593049_12 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000000000000002161 147.0
DYD3_k127_2593049_13 ISFtu1 transposase K01152 - - - 0.000000000000000002977 89.0
DYD3_k127_2593049_15 23S rRNA-intervening sequence protein - - - 0.0000000000004695 74.0
DYD3_k127_2593049_16 histidine kinase HAMP region domain protein K03406 - - 0.0000000003263 73.0
DYD3_k127_2593049_2 Protein serine threonine phosphatase K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005266 413.0
DYD3_k127_2593049_3 PFAM Patatin-like phospholipase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005621 384.0
DYD3_k127_2593049_4 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007941 344.0
DYD3_k127_2593049_5 PFAM sigma-54 factor interaction domain-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000342 349.0
DYD3_k127_2593049_6 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004204 263.0
DYD3_k127_2593049_7 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007238 264.0
DYD3_k127_2593049_8 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000001055 231.0
DYD3_k127_2593049_9 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000003099 236.0
DYD3_k127_2623191_0 PFAM Glycosyl transferase, group 1 - - - 1.37e-251 799.0
DYD3_k127_2623191_1 beta-1,4-mannooligosaccharide phosphorylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004795 492.0
DYD3_k127_2623191_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000009686 230.0
DYD3_k127_262371_0 Putative amidoligase enzyme (DUF2126) - - - 0.0 1345.0
DYD3_k127_262371_1 Circularly permuted ATP-grasp type 2 - - - 1.001e-250 800.0
DYD3_k127_262371_2 Bacterial protein of unknown function (DUF839) K07093 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005698 377.0
DYD3_k127_262371_3 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004198 334.0
DYD3_k127_262371_4 transglutaminase-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001318 309.0
DYD3_k127_262371_5 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH K00033 - 1.1.1.343,1.1.1.44 0.00000000000000000000000000000000000000000000000138 192.0
DYD3_k127_2643110_0 4Fe-4S dicluster domain - - - 1.016e-303 945.0
DYD3_k127_2643110_1 deoxyhypusine monooxygenase activity - - - 9.364e-246 788.0
DYD3_k127_2643110_10 SNARE associated Golgi protein K03975 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000002552 244.0
DYD3_k127_2643110_11 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.000000000000000000000000000000000000000000000000000000004445 211.0
DYD3_k127_2643110_12 - - - - 0.00000000000000000000000000000000000000000000000000001082 198.0
DYD3_k127_2643110_13 negative regulation of canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment - - - 0.000000000000000000000000000000000000000000000000003989 195.0
DYD3_k127_2643110_14 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000005485 143.0
DYD3_k127_2643110_16 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.000000000000000000000000000003452 126.0
DYD3_k127_2643110_19 PHAX RNA-binding domain K14291 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0006139,GO:0006351,GO:0006366,GO:0006403,GO:0006405,GO:0006408,GO:0006725,GO:0006807,GO:0006810,GO:0006913,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009301,GO:0009987,GO:0010467,GO:0015630,GO:0015643,GO:0015931,GO:0016070,GO:0016073,GO:0018130,GO:0019438,GO:0031974,GO:0031981,GO:0032774,GO:0033036,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0036477,GO:0042795,GO:0043025,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044297,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0046907,GO:0050657,GO:0050658,GO:0051030,GO:0051168,GO:0051169,GO:0051179,GO:0051234,GO:0051236,GO:0051641,GO:0051649,GO:0070013,GO:0071702,GO:0071704,GO:0071705,GO:0090304,GO:0097064,GO:0097159,GO:0097458,GO:0097659,GO:0098781,GO:1901360,GO:1901362,GO:1901363,GO:1901576 - 0.00000002548 64.0
DYD3_k127_2643110_2 Domain of unknown function (DUF4175) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009357 556.0
DYD3_k127_2643110_20 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.0000005435 59.0
DYD3_k127_2643110_3 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004729 418.0
DYD3_k127_2643110_4 DNA methylase K00571 - 2.1.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001548 391.0
DYD3_k127_2643110_5 Sulfatase-modifying factor enzyme 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 372.0
DYD3_k127_2643110_6 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 377.0
DYD3_k127_2643110_7 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000792 302.0
DYD3_k127_2643110_8 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000001428 261.0
DYD3_k127_2643110_9 CAAX protease self-immunity K07052 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001804 258.0
DYD3_k127_2665085_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000497 260.0
DYD3_k127_2665085_1 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000003827 228.0
DYD3_k127_2665085_2 Prokaryotic N-terminal methylation motif K02650 - - 0.0000000000000000000000000000000000001101 150.0
DYD3_k127_2665085_3 Belongs to the N-Me-Phe pilin family K02650 - - 0.00000000000000000000000000000000007056 139.0
DYD3_k127_2665085_4 Prokaryotic N-terminal methylation motif K02456 - - 0.00000000000000000000000000000003508 133.0
DYD3_k127_2665085_5 Belongs to the N-Me-Phe pilin family K02650 - - 0.00004439 54.0
DYD3_k127_2668259_0 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain - - - 1.039e-235 760.0
DYD3_k127_2668259_1 Smr domain - - - 0.000000000000000000000000000000002189 133.0
DYD3_k127_2668259_2 DNA-templated transcription, initiation K03088 GO:0000988,GO:0000990,GO:0002791,GO:0003674,GO:0006355,GO:0006950,GO:0008150,GO:0009266,GO:0009405,GO:0009408,GO:0009628,GO:0009889,GO:0010468,GO:0010556,GO:0010565,GO:0016987,GO:0019216,GO:0019217,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0032879,GO:0032880,GO:0043254,GO:0044087,GO:0044419,GO:0050708,GO:0050789,GO:0050794,GO:0050896,GO:0051046,GO:0051049,GO:0051128,GO:0051171,GO:0051223,GO:0051252,GO:0051704,GO:0060255,GO:0062012,GO:0065007,GO:0070201,GO:0080090,GO:0090087,GO:0140110,GO:1903506,GO:1903530,GO:2000112,GO:2000142,GO:2001141 - 0.0000000000000000000000000000002633 136.0
DYD3_k127_2668259_3 Tetratricopeptide repeat - - - 0.0000000006065 72.0
DYD3_k127_2668259_4 helix_turn_helix, arabinose operon control protein K02099 - - 0.0009736 50.0
DYD3_k127_2693935_0 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein K00341 - 1.6.5.3 1.736e-280 885.0
DYD3_k127_2693935_1 Proton-conducting membrane transporter K00342 - 1.6.5.3 1.027e-232 737.0
DYD3_k127_2693935_10 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005815 254.0
DYD3_k127_2693935_11 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000002346 248.0
DYD3_k127_2693935_12 - - - - 0.0000000000000000000000000000000000000000000000000000000000000001963 244.0
DYD3_k127_2693935_13 Peptidase C26 K01951 - 6.3.5.2 0.0000000000000000000000000000000000000000000000000000004919 201.0
DYD3_k127_2693935_16 - - - - 0.00000000000000000000000000000000000000000005152 167.0
DYD3_k127_2693935_17 Biopolymer transport protein ExbD/TolR K03559 - - 0.000000000000000000000000000000000000000001318 161.0
DYD3_k127_2693935_18 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.000000000000000000000000000000000001079 154.0
DYD3_k127_2693935_19 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0030964,GO:0032991,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:0098797,GO:0098803,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1990204 1.6.5.3 0.00000000000000000000000000004873 119.0
DYD3_k127_2693935_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00334,K00335 - 1.6.5.3 5.825e-220 689.0
DYD3_k127_2693935_20 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000000000000000237 108.0
DYD3_k127_2693935_21 Gram-negative bacterial TonB protein C-terminal - - - 0.000000000000000001322 96.0
DYD3_k127_2693935_23 - - - - 0.000000001498 70.0
DYD3_k127_2693935_3 HAD superfamily (subfamily IG) hydrolase 5'-Nucleotidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001855 583.0
DYD3_k127_2693935_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009636 512.0
DYD3_k127_2693935_5 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002249 454.0
DYD3_k127_2693935_6 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004809 430.0
DYD3_k127_2693935_7 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141 3.4.21.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008771 338.0
DYD3_k127_2693935_8 Belongs to the mandelate racemase muconate lactonizing enzyme family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002344 321.0
DYD3_k127_2693935_9 MotA/TolQ/ExbB proton channel family K03561 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002173 266.0
DYD3_k127_2710900_0 Glycosyl hydrolase family 65, N-terminal domain K15923 - 3.2.1.51 0.0 1066.0
DYD3_k127_2710900_1 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.17 8.302e-288 894.0
DYD3_k127_2710900_10 Belongs to the glycosyl hydrolase family 6 - - - 0.000000000000000000000000000000000000000000000000004065 203.0
DYD3_k127_2710900_11 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.000000000000000000000000000000000000000004546 160.0
DYD3_k127_2710900_12 - - - - 0.0000000000000000000000000000000000003003 153.0
DYD3_k127_2710900_13 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000000000007735 140.0
DYD3_k127_2710900_14 - - - - 0.00000000000000000007842 97.0
DYD3_k127_2710900_15 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.00000000006488 68.0
DYD3_k127_2710900_16 FR47-like protein K03789 - 2.3.1.128 0.0000000008568 70.0
DYD3_k127_2710900_2 protein kinase activity - - - 3.491e-221 712.0
DYD3_k127_2710900_3 COG1233 Phytoene dehydrogenase and related proteins - - - 1.122e-213 675.0
DYD3_k127_2710900_4 Aminotransferase K01845 - 5.4.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004205 578.0
DYD3_k127_2710900_5 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07305,K12267 - 1.8.4.11,1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003477 529.0
DYD3_k127_2710900_6 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005865 325.0
DYD3_k127_2710900_7 PFAM Uracil-DNA glycosylase superfamily K10800 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001797 314.0
DYD3_k127_2710900_8 long-chain fatty acid transporting porin activity - - - 0.00000000000000000000000000000000000000000000000000000000004066 228.0
DYD3_k127_2710900_9 Activator of hsp90 atpase 1 family protein - - - 0.000000000000000000000000000000000000000000000000000000001032 208.0
DYD3_k127_2747865_0 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008892 571.0
DYD3_k127_2747865_1 NfeD-like C-terminal, partner-binding K07403 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 417.0
DYD3_k127_2747865_10 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000005737 79.0
DYD3_k127_2747865_11 helix_turn_helix, Lux Regulon - - - 0.00000000000002456 81.0
DYD3_k127_2747865_12 Surface antigen - - - 0.00000008363 65.0
DYD3_k127_2747865_2 Family membership K08884 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004411 349.0
DYD3_k127_2747865_4 oxidoreductase activity K07114 - - 0.000000000000000000000000000000000000000000000000000000000005204 226.0
DYD3_k127_2747865_5 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000001784 166.0
DYD3_k127_2747865_6 gluconolactonase activity - - - 0.000000000000000000000000000000001508 151.0
DYD3_k127_2747865_7 Tetratricopeptide repeat - - - 0.0000000000000000000000005328 108.0
DYD3_k127_2747865_8 PEGA domain - - - 0.0000000000000000000000006769 121.0
DYD3_k127_2748060_0 phage integrase domain protein SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000005867 246.0
DYD3_k127_2748060_1 Helix-turn-helix type 11 domain protein K13572 - - 0.000000000000000000004968 106.0
DYD3_k127_2748060_2 - - - - 0.00000000000000000085 93.0
DYD3_k127_2748060_3 PD-(D/E)XK nuclease superfamily - - - 0.000000002124 62.0
DYD3_k127_2748060_4 Cupin domain - - - 0.000009884 51.0
DYD3_k127_2757244_0 Heat shock 70 kDa protein K04043,K04045 - - 2.045e-199 637.0
DYD3_k127_2757244_1 Protein of unknown function (DUF1592) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002128 269.0
DYD3_k127_2757244_10 Putative restriction endonuclease - - - 0.00000000000001214 79.0
DYD3_k127_2757244_11 Trypsin-like serine protease - - - 0.000000000004937 78.0
DYD3_k127_2757244_13 Putative restriction endonuclease - - - 0.00004683 51.0
DYD3_k127_2757244_14 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.0001153 52.0
DYD3_k127_2757244_15 DnaJ molecular chaperone homology domain - - - 0.0002864 53.0
DYD3_k127_2757244_16 - - - - 0.0009772 47.0
DYD3_k127_2757244_2 Forkhead associated domain - - - 0.00000000000000000000000000000000000000000000000000000000001804 224.0
DYD3_k127_2757244_3 - - - - 0.00000000000000000000000000000000000000000000000000000000003306 224.0
DYD3_k127_2757244_5 Protein conserved in bacteria - - - 0.00000000000000000000000000000000002938 143.0
DYD3_k127_2757244_6 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000000000001252 137.0
DYD3_k127_2757244_7 Protein of unknown function (DUF1552) - - - 0.000000000000000000000000001799 129.0
DYD3_k127_2757244_8 Putative restriction endonuclease - - - 0.00000000000000001822 86.0
DYD3_k127_2761990_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1016.0
DYD3_k127_2761990_1 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008514 615.0
DYD3_k127_2761990_10 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.000000000000000000000000000000000000000000000000002178 187.0
DYD3_k127_2761990_11 Belongs to the peptidase S1B family K01318 - 3.4.21.19 0.00000000000000000000000000000000000000000000000002923 194.0
DYD3_k127_2761990_12 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000002135 187.0
DYD3_k127_2761990_13 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000008696 197.0
DYD3_k127_2761990_14 Regulator of chromosome condensation (RCC1) repeat - - - 0.0000000000000000000000000000000000000000000001288 183.0
DYD3_k127_2761990_15 Transcriptional regulator - - - 0.00000000000000000000000000000000000000002758 157.0
DYD3_k127_2761990_16 Belongs to the UPF0301 (AlgH) family K07735 - - 0.0000000000000000000000000000000000000009401 154.0
DYD3_k127_2761990_17 - - - - 0.0000000000000000000000000000000002274 141.0
DYD3_k127_2761990_18 PRC-barrel domain - - - 0.000000000000000000000000000000003977 135.0
DYD3_k127_2761990_19 beta-lactamase activity K07126 - - 0.00000000000000000000000003702 124.0
DYD3_k127_2761990_2 transferase activity, transferring glycosyl groups K03525 - 2.7.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000187 394.0
DYD3_k127_2761990_20 periplasmic protein thiol disulfide oxidoreductases, DsbE subfamily K02199 - - 0.000000000000000000007752 101.0
DYD3_k127_2761990_21 PFAM Protein kinase domain K08309 - - 0.00000000000000000003525 102.0
DYD3_k127_2761990_22 Versican core protein-like K06793,K06794 - - 0.000000000002766 77.0
DYD3_k127_2761990_23 Belongs to the MEMO1 family K06990 - - 0.0003331 51.0
DYD3_k127_2761990_3 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004672 322.0
DYD3_k127_2761990_4 PFAM Glucose Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 324.0
DYD3_k127_2761990_5 Glycosyltransferase Family 4 K14335 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000706 317.0
DYD3_k127_2761990_6 amidohydrolase K07046 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002825 293.0
DYD3_k127_2761990_7 PFAM Formylglycine-generating sulfatase enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005248 269.0
DYD3_k127_2761990_8 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000002322 255.0
DYD3_k127_2761990_9 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000002076 239.0
DYD3_k127_2767600_0 PFAM Formylglycine-generating sulfatase enzyme K20333 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007987 279.0
DYD3_k127_2767600_1 lipolytic protein G-D-S-L family - - - 0.0000000000000000000000000000000000000000000000002728 187.0
DYD3_k127_2767600_2 protein heterodimerization activity - - - 0.0000000000000000000000000000000000000001493 158.0
DYD3_k127_2792430_0 peptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006922 445.0
DYD3_k127_2792430_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000057 334.0
DYD3_k127_2792430_2 PFAM chorismate K01665 - 2.6.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001634 304.0
DYD3_k127_2792430_3 SPFH domain-Band 7 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008468 284.0
DYD3_k127_2792430_4 Nucleotidyl transferase K00966 - 2.7.7.13 0.000000000000000000000000000000000000000000000000000002545 205.0
DYD3_k127_2792430_5 Sporulation related domain - - - 0.0000000000000000000000000000000000000000000006136 179.0
DYD3_k127_2792430_8 Transcription elongation factor, GreA/GreB, C-term - - - 0.000000000000000005875 91.0
DYD3_k127_2796934_0 PFAM glycoside hydrolase family 3 domain protein K05349 - 3.2.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002109 589.0
DYD3_k127_2796934_1 Flavin-binding monooxygenase-like K07222 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 562.0
DYD3_k127_2796934_10 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001796 402.0
DYD3_k127_2796934_11 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008032 417.0
DYD3_k127_2796934_12 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 GO:0003674,GO:0003824,GO:0004349,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0018130,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001555 368.0
DYD3_k127_2796934_13 FKBP-type peptidyl-prolyl cis-trans isomerase K01802,K03772 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002935 357.0
DYD3_k127_2796934_15 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002157 304.0
DYD3_k127_2796934_16 TIGRFAM MSMEG_0572 family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000247 299.0
DYD3_k127_2796934_17 PFAM CMP dCMP deaminase zinc-binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001283 297.0
DYD3_k127_2796934_18 AIR synthase related protein, C-terminal domain K07123 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000183 299.0
DYD3_k127_2796934_19 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002037 295.0
DYD3_k127_2796934_2 von Willebrand factor, type A K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005297 565.0
DYD3_k127_2796934_20 Zn peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003183 267.0
DYD3_k127_2796934_21 (ABC) transporter K02013 - 3.6.3.34 0.00000000000000000000000000000000000000000000000000000000000000000007786 244.0
DYD3_k127_2796934_22 Belongs to the peptidase S1B family - - - 0.000000000000000000000000000000000000000000000000000000000000000002977 238.0
DYD3_k127_2796934_23 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000002072 245.0
DYD3_k127_2796934_24 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.000000000000000000000000000000000000000000000000000000000000009473 219.0
DYD3_k127_2796934_25 Protein kinase domain - - - 0.00000000000000000000000000000000000000000000000000000000000002858 234.0
DYD3_k127_2796934_26 domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000002872 236.0
DYD3_k127_2796934_27 Periplasmic binding protein K02016 - - 0.0000000000000000000000000000000000000000000000000000000000001197 229.0
DYD3_k127_2796934_28 Activator of Hsp90 ATPase - - - 0.00000000000000000000000000000000000000000002685 166.0
DYD3_k127_2796934_29 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000008406 157.0
DYD3_k127_2796934_3 Transcriptional regulator K12146,K15836 GO:0000976,GO:0000984,GO:0001017,GO:0001067,GO:0001150,GO:0001158,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016043,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0022607,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031334,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0035326,GO:0042802,GO:0043170,GO:0043254,GO:0043565,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045893,GO:0045935,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0060255,GO:0065003,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2000142,GO:2000144,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 520.0
DYD3_k127_2796934_30 4Fe-4S single cluster domain - - - 0.00000000000000000000000000000000009105 151.0
DYD3_k127_2796934_31 signal peptide processing K03100 - 3.4.21.89 0.00000000000000000000000000000005461 134.0
DYD3_k127_2796934_32 SNARE associated Golgi protein - - - 0.0000000000000000000000000000007063 130.0
DYD3_k127_2796934_33 ThiF family - - - 0.00000000000000000000000000001467 134.0
DYD3_k127_2796934_34 flavoprotein involved in K transport - - - 0.0000000000000000000000005136 113.0
DYD3_k127_2796934_35 pyrroloquinoline quinone binding - - - 0.000000000000000000000009357 116.0
DYD3_k127_2796934_36 DUF218 domain - - - 0.000000000000000000001301 101.0
DYD3_k127_2796934_37 Protein of unknown function (DUF962) - - - 0.00000000000000000005147 95.0
DYD3_k127_2796934_38 FMN reductase (NADPH) activity - - - 0.0000000000000000001372 94.0
DYD3_k127_2796934_39 SMART Elongator protein 3 MiaB NifB K04034 - 1.21.98.3 0.0000000000000000002815 103.0
DYD3_k127_2796934_4 Carbon-nitrogen hydrolase K01502 - 3.5.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007282 451.0
DYD3_k127_2796934_40 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000004535 99.0
DYD3_k127_2796934_41 - - - - 0.000000000000000006975 87.0
DYD3_k127_2796934_42 MafB19-like deaminase K01489 - 3.5.4.5 0.000000000000001394 83.0
DYD3_k127_2796934_43 Serine peptidase inhibitor, Kunitz type, 2 K03909 - - 0.000000000000004326 83.0
DYD3_k127_2796934_44 DNA-templated transcription, initiation K03088 - - 0.000000000007044 76.0
DYD3_k127_2796934_46 Tetratricopeptide repeat - - - 0.0000001625 62.0
DYD3_k127_2796934_47 base-excision repair, DNA ligation K10776,K10798 GO:0003674,GO:0003824,GO:0003909,GO:0003910,GO:0003950,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006464,GO:0006471,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0016874,GO:0016886,GO:0019538,GO:0033554,GO:0034641,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0070212,GO:0071704,GO:0090304,GO:0140097,GO:1901360,GO:1901564 2.4.2.30,6.5.1.1 0.000000559 61.0
DYD3_k127_2796934_48 - - - - 0.0000005819 55.0
DYD3_k127_2796934_49 WD-40 repeat - - - 0.000001201 61.0
DYD3_k127_2796934_5 Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000146 454.0
DYD3_k127_2796934_50 Helix-turn-helix domain - - - 0.00005057 48.0
DYD3_k127_2796934_6 FHA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001463 451.0
DYD3_k127_2796934_7 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970,K00974 - 2.7.7.19,2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 443.0
DYD3_k127_2796934_8 Forkhead associated domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001488 435.0
DYD3_k127_2796934_9 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001534 433.0
DYD3_k127_2812137_0 CHASE3 domain - - - 1.678e-286 919.0
DYD3_k127_2812137_1 peptidase K07386 - - 3.076e-231 735.0
DYD3_k127_2812137_10 Glutathione S-transferase, C-terminal domain K04097 - 2.5.1.18,5.3.99.2 0.00000000000000000000000000000008157 132.0
DYD3_k127_2812137_11 PFAM regulator of chromosome condensation, RCC1 - - - 0.00000000004546 74.0
DYD3_k127_2812137_12 SnoaL-like domain - - - 0.0000002055 58.0
DYD3_k127_2812137_13 Papain-like cysteine protease AvrRpt2 - - - 0.000004655 57.0
DYD3_k127_2812137_14 - - - - 0.00001187 54.0
DYD3_k127_2812137_2 Belongs to the glycosyl hydrolase family 6 - - - 1.378e-198 634.0
DYD3_k127_2812137_3 long-chain fatty acid transporting porin activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004294 544.0
DYD3_k127_2812137_4 PFAM MCP methyltransferase CheR-type K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003403 323.0
DYD3_k127_2812137_5 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004371 320.0
DYD3_k127_2812137_6 Belongs to the PdxA family K00097,K22024 - 1.1.1.262,1.1.1.408,1.1.1.409 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002984 294.0
DYD3_k127_2812137_7 Glutathione S-transferase K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000001678 218.0
DYD3_k127_2812137_8 CheB methylesterase K03412 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000000000000001304 190.0
DYD3_k127_2812137_9 Beta-L-arabinofuranosidase, GH127 - - - 0.00000000000000000000000000000001708 141.0
DYD3_k127_2833017_0 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004424 400.0
DYD3_k127_2833017_1 Tetratricopeptide repeats - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005006 393.0
DYD3_k127_2833017_2 Di-haem oxidoreductase, putative peroxidase - - - 0.00000000000000000000000000000000000000000000000000009699 207.0
DYD3_k127_2833017_3 Putative modulator of DNA gyrase K03568 - - 0.000000000000000000000000000000000000000000000001121 178.0
DYD3_k127_2833017_4 - - - - 0.000000000000000008136 98.0
DYD3_k127_2834680_0 Alpha-tubulin suppressor and related RCC1 domain-containing - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006022 325.0
DYD3_k127_2834680_1 Family membership K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000008834 263.0
DYD3_k127_2834680_2 Forkhead associated domain - - - 0.00000000000000000000000000000000000000000000000000000000000000001883 242.0
DYD3_k127_2834680_3 PFAM regulator of chromosome condensation, RCC1 - - - 0.0000000000000000000000000000000000000000000000000000000001322 223.0
DYD3_k127_2834680_4 Belongs to the glycosyl hydrolase 18 family - - - 0.000000000000000000000000004735 125.0
DYD3_k127_2834680_5 helix_turn_helix, Lux Regulon - - - 0.0000009332 54.0
DYD3_k127_2834680_6 PEGA domain - - - 0.000001698 59.0
DYD3_k127_2834680_7 helix_turn_helix, Lux Regulon K07684 - - 0.00005762 51.0
DYD3_k127_2839333_0 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003675 488.0
DYD3_k127_2839333_1 Thioredoxin K03672 - 1.8.1.8 0.00000000000000000000000000000000000000000000000006871 181.0
DYD3_k127_2839333_2 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.000000000000000000000000000000000001164 154.0
DYD3_k127_2839333_3 Universal stress protein - - - 0.0000000000000000000000000503 112.0
DYD3_k127_2839333_4 cellulose binding - - - 0.000000000000000000000004091 117.0
DYD3_k127_2839333_5 Universal stress protein - - - 0.00000000000000002792 87.0
DYD3_k127_2843401_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 1.775e-209 668.0
DYD3_k127_2843401_1 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000058 472.0
DYD3_k127_2843401_2 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002934 255.0
DYD3_k127_2843401_3 PFAM transferase hexapeptide repeat containing protein K00975 - 2.7.7.27 0.00000000000000000000000000000001793 131.0
DYD3_k127_2845482_0 Histidine Phosphotransfer domain K03407 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003431 507.0
DYD3_k127_2845482_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009782 495.0
DYD3_k127_2845482_11 Two component signalling adaptor domain K03408 - - 0.00000000000000000000000166 113.0
DYD3_k127_2845482_13 recombinase activity - - - 0.000006086 52.0
DYD3_k127_2845482_14 chemotaxis K03408,K03415 - - 0.00002982 53.0
DYD3_k127_2845482_2 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001895 402.0
DYD3_k127_2845482_3 PAS fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 406.0
DYD3_k127_2845482_4 Methyltransferase, chemotaxis proteins K13486 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009736 389.0
DYD3_k127_2845482_5 PFAM chemotaxis sensory transducer - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008168 387.0
DYD3_k127_2845482_6 PFAM Aminotransferase class I and II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008125 337.0
DYD3_k127_2845482_7 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000001326 251.0
DYD3_k127_2845482_8 GAF domain - - - 0.0000000000000000000000000000000000000000000000000000047 212.0
DYD3_k127_2861647_0 repeat protein - - - 0.0 1658.0
DYD3_k127_2861647_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1144.0
DYD3_k127_2861647_10 PFAM Type II secretion system protein E K02454 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007558 479.0
DYD3_k127_2861647_11 Type IV pilus assembly protein PilM; K02461 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007027 426.0
DYD3_k127_2861647_12 Type II secretion system (T2SS), protein K K02460 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 400.0
DYD3_k127_2861647_13 N-4 methylation of cytosine K00571 - 2.1.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002713 354.0
DYD3_k127_2861647_14 periplasmic protein kinase ArgK and related GTPases of G3E family K07588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004865 311.0
DYD3_k127_2861647_15 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 293.0
DYD3_k127_2861647_16 General secretion pathway protein C K02452 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 291.0
DYD3_k127_2861647_17 oxidoreductase activity K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001037 293.0
DYD3_k127_2861647_18 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001222 260.0
DYD3_k127_2861647_19 Alpha/beta hydrolase family K07020 - - 0.0000000000000000000000000000000000000000000000000000000000000331 220.0
DYD3_k127_2861647_2 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.0 1071.0
DYD3_k127_2861647_20 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K01759 - 4.4.1.5 0.00000000000000000000000000000000000000000000000000000000001669 222.0
DYD3_k127_2861647_21 Type II secretion system (T2SS), protein J K02459 - - 0.0000000000000000000000000000000000000000000000000000001145 214.0
DYD3_k127_2861647_22 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000002572 196.0
DYD3_k127_2861647_23 Prokaryotic N-terminal methylation motif K02457 - - 0.00000000000000000000000000000000000000000000000002196 187.0
DYD3_k127_2861647_24 Ferredoxin - - - 0.000000000000000000000000000000000000000000000005161 176.0
DYD3_k127_2861647_25 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000000000000000000000000000006608 179.0
DYD3_k127_2861647_26 Roadblock/LC7 domain - - - 0.0000000000000000000000000000000000000002438 155.0
DYD3_k127_2861647_27 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.0000000000000000000000000000000000000009777 154.0
DYD3_k127_2861647_28 Prokaryotic N-terminal methylation motif K02458 - - 0.0000000000000000000000000000000000001505 156.0
DYD3_k127_2861647_3 TIGRFAM methylmalonyl-CoA mutase N-terminal domain K01847,K01848 - 5.4.99.2 4.275e-279 879.0
DYD3_k127_2861647_32 Belongs to the mandelate racemase muconate lactonizing enzyme family - - - 0.000000000000000002135 100.0
DYD3_k127_2861647_33 General secretion pathway protein G K02456 - - 0.00000000000000004271 91.0
DYD3_k127_2861647_34 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589,K13052 - - 0.00000000000003306 78.0
DYD3_k127_2861647_36 Uroporphyrinogen decarboxylase (URO-D) K14080 - 2.1.1.246 0.0000000001753 64.0
DYD3_k127_2861647_4 Type II and III secretion system protein K02453 - - 1.456e-230 755.0
DYD3_k127_2861647_5 response regulator K07713 - - 2.211e-228 715.0
DYD3_k127_2861647_6 aconitate hydratase K01681 - 4.2.1.3 2.106e-212 676.0
DYD3_k127_2861647_7 Biotin carboxylase K01959,K01961 - 6.3.4.14,6.4.1.1,6.4.1.2 1.36e-205 647.0
DYD3_k127_2861647_8 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K00850 - 2.7.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006766 569.0
DYD3_k127_2861647_9 General secretion pathway protein F K02455,K02653 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003513 514.0
DYD3_k127_2878400_0 Succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003624 363.0
DYD3_k127_2878400_1 Fumarate reductase flavoprotein C-term K00239,K00278 GO:0000104,GO:0000166,GO:0001539,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006091,GO:0006113,GO:0006928,GO:0006950,GO:0006974,GO:0006996,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016043,GO:0016491,GO:0016627,GO:0022607,GO:0022900,GO:0030030,GO:0030031,GO:0032991,GO:0033554,GO:0036094,GO:0040011,GO:0043167,GO:0043168,GO:0044085,GO:0044237,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0044780,GO:0044781,GO:0045273,GO:0045274,GO:0045283,GO:0045284,GO:0045333,GO:0048037,GO:0048870,GO:0050660,GO:0050662,GO:0050896,GO:0051179,GO:0051674,GO:0051716,GO:0055114,GO:0070469,GO:0070470,GO:0070925,GO:0071840,GO:0071944,GO:0071949,GO:0071973,GO:0097159,GO:0097588,GO:0098796,GO:0098797,GO:0098803,GO:1901265,GO:1901363 1.3.5.1,1.3.5.4,1.4.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001765 276.0
DYD3_k127_2878400_2 Extensin-like protein C-terminus - - - 0.0000000000000000000000000003697 127.0
DYD3_k127_2878400_3 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S K00311 - 1.5.5.1 0.000000000000000008685 85.0
DYD3_k127_2881279_0 4-hydroxybenzoate 3-monooxygenase K00481 - 1.14.13.2 1.198e-204 643.0
DYD3_k127_2881279_1 Amidohydrolase K10220,K14333 - 4.1.1.46,4.2.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006285 596.0
DYD3_k127_2881279_10 belongs to the sigma-70 factor family, ECF subfamily K03088 - - 0.000000000000000002475 92.0
DYD3_k127_2881279_11 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000002854 81.0
DYD3_k127_2881279_12 Trehalose utilisation K09992 - - 0.00000000001937 76.0
DYD3_k127_2881279_13 Fe2 -dicitrate sensor, membrane component K07165 - - 0.0000006171 62.0
DYD3_k127_2881279_2 Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003336 550.0
DYD3_k127_2881279_3 Oxidoreductase family, NAD-binding Rossmann fold K10219 - 1.1.1.312 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004856 523.0
DYD3_k127_2881279_4 Catalytic LigB subunit of aromatic ring-opening dioxygenase K04099,K04101 - 1.13.11.57,1.13.11.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 510.0
DYD3_k127_2881279_5 aldo keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005229 411.0
DYD3_k127_2881279_6 Aldolase/RraA K10218 - 4.1.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001469 337.0
DYD3_k127_2881279_7 Bacterial extracellular solute-binding protein K02020 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003216 263.0
DYD3_k127_2881279_8 Aromatic-ring-opening dioxygenase LigAB, LigA subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001092 249.0
DYD3_k127_2881279_9 Concanavalin A-like lectin/glucanases superfamily - - - 0.0000000000000000000000000000000000000007438 160.0
DYD3_k127_2896207_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002825 601.0
DYD3_k127_2896207_1 ErfK ybiS ycfS ynhG family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007574 439.0
DYD3_k127_2896207_10 PFAM Uncharacterised protein family UPF0118 - - - 0.000000000000000000000000000000000000000000000000003031 205.0
DYD3_k127_2896207_11 NUDIX hydrolase K03574 - 3.6.1.55 0.00000000000000000000000000000000000000000000000004152 184.0
DYD3_k127_2896207_12 protein containing a von Willebrand factor type A (vWA) domain - - - 0.0000000000000000000000000000000000000131 161.0
DYD3_k127_2896207_13 Cytochrome c554 and c-prime - - - 0.000000000000000000000002283 120.0
DYD3_k127_2896207_14 Glutathione-dependent formaldehyde-activating enzyme - - - 0.00000000000000000001751 92.0
DYD3_k127_2896207_15 Belongs to the glycosyl hydrolase family 6 K19668,K20844 - 3.2.1.55,3.2.1.91 0.0000000000000003303 92.0
DYD3_k127_2896207_17 Forkhead associated domain - - - 0.00004371 57.0
DYD3_k127_2896207_2 Type II/IV secretion system protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006059 439.0
DYD3_k127_2896207_3 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002566 435.0
DYD3_k127_2896207_4 Protein of unknown function (DUF1592) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001433 404.0
DYD3_k127_2896207_5 Protein of unknown function (DUF1552) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002423 349.0
DYD3_k127_2896207_6 signal-transduction protein containing cAMP-binding and CBS domains K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000001052 260.0
DYD3_k127_2896207_7 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000008667 250.0
DYD3_k127_2896207_8 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000003965 223.0
DYD3_k127_2896207_9 EVE domain - - - 0.00000000000000000000000000000000000000000000000000003427 192.0
DYD3_k127_2961832_0 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016072,GO:0016075,GO:0019439,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 2.7.7.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 331.0
DYD3_k127_2961832_1 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.000000000000000000000000000000000000000000002456 175.0
DYD3_k127_2961832_2 Pfam S-adenosyl-l-methionine hydroxide adenosyltransferase K09134,K21153,K22205 GO:0003674,GO:0003824,GO:0016740,GO:0016765 2.5.1.63,2.5.1.94 0.0000000000000000000000000000000001659 145.0
DYD3_k127_2961832_3 - - - - 0.0000000000000000000000000002314 124.0
DYD3_k127_2961832_4 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.000000000003368 79.0
DYD3_k127_2961832_5 Cytochrome c - - - 0.000007318 57.0
DYD3_k127_297892_0 Sugar (and other) transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006517 345.0
DYD3_k127_297892_1 Belongs to the glycosyl hydrolase family 6 - - - 0.0000000000000000000000000000000000000000000000000000000000007535 222.0
DYD3_k127_298000_0 Type II IV secretion system protein K02283,K03609 - - 7.593e-202 643.0
DYD3_k127_298000_1 O-methyltransferase activity - - - 1.435e-196 634.0
DYD3_k127_298000_10 oligosaccharyl transferase activity - - - 0.00000000000000000000000000000000000003578 162.0
DYD3_k127_298000_15 RHS protein - - - 0.00000000000000000000001082 116.0
DYD3_k127_298000_17 - - - - 0.0000000000000000005007 101.0
DYD3_k127_298000_18 Glycosyltransferase family 87 - - - 0.000000000000009994 87.0
DYD3_k127_298000_2 Type II/IV secretion system protein K02283 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 529.0
DYD3_k127_298000_22 S-type Pyocin - - - 0.00002182 57.0
DYD3_k127_298000_3 Pilus formation protein N terminal region K02280 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005436 389.0
DYD3_k127_298000_4 ABC transporter K01990,K19340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001563 276.0
DYD3_k127_298000_5 Type II secretion system (T2SS), protein F K12511 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001447 283.0
DYD3_k127_298000_6 metal-dependent membrane protease K07052 - - 0.00000000000000000000000000000000000000000000000000000000000000000006986 262.0
DYD3_k127_298000_7 Type II secretion system (T2SS), protein F K12510 - - 0.0000000000000000000000000000000000000000000000000000002469 212.0
DYD3_k127_298000_9 Flp pilus assembly protein RcpC/CpaB K02279 - - 0.000000000000000000000000000000000000000000000002171 184.0
DYD3_k127_2982463_1 TM2 domain - - - 0.000000000000000000000000000000000000000000000000006983 186.0
DYD3_k127_2982463_2 PilZ domain - - - 0.000000000000000007384 90.0
DYD3_k127_3003427_0 Glycosyl hydrolases family 15 - - - 4.635e-271 866.0
DYD3_k127_3003427_1 ATPase components of ABC transporters with duplicated ATPase domains K06158 - - 5.416e-253 790.0
DYD3_k127_3003427_10 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007442 270.0
DYD3_k127_3003427_11 - - - - 0.00000000000000000000000000000000000000000000000000000008549 206.0
DYD3_k127_3003427_13 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000004349 158.0
DYD3_k127_3003427_16 Fic/DOC family - - - 0.0000000000000000001514 96.0
DYD3_k127_3003427_18 PFAM MULE transposase, conserved domain - - - 0.000000005719 67.0
DYD3_k127_3003427_3 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006908 529.0
DYD3_k127_3003427_4 ATP:ADP antiporter activity K01932,K03301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009871 396.0
DYD3_k127_3003427_5 Protein kinase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001458 360.0
DYD3_k127_3003427_6 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002458 357.0
DYD3_k127_3003427_7 membrane organization - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005345 342.0
DYD3_k127_3003427_8 Family membership K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008724 285.0
DYD3_k127_3003427_9 ATP ADP translocase K03301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000212 280.0
DYD3_k127_3023508_0 PFAM TPR repeat-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003881 591.0
DYD3_k127_3023508_2 PFAM Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase K01448 - 3.5.1.28 0.0000000000000000000000000000000000169 144.0
DYD3_k127_3023508_3 - - - - 0.0000000000000000000001407 104.0
DYD3_k127_3023508_4 PFAM Uncharacterised protein family UPF0150 K18843 - - 0.000000000000001168 80.0
DYD3_k127_3023508_5 PFAM Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase K01448 - 3.5.1.28 0.000000000000006979 80.0
DYD3_k127_3023508_6 mRNA binding - - - 0.000000000004183 69.0
DYD3_k127_3023508_7 23S rRNA-intervening sequence protein - - - 0.00000000004744 70.0
DYD3_k127_3023508_8 PFAM Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase K01448 - 3.5.1.28 0.0000000001368 67.0
DYD3_k127_302489_0 PFAM glutamine synthetase catalytic region K01915 - 6.3.1.2 2.734e-214 674.0
DYD3_k127_302489_1 protein kinase activity - - - 5.013e-204 664.0
DYD3_k127_302489_10 Serine aminopeptidase, S33 K03928 - 3.1.1.1 0.000000000000000000000000000000000000000000000000000001885 204.0
DYD3_k127_302489_12 Pro-kumamolisin, activation domain - - - 0.000000009111 67.0
DYD3_k127_302489_13 23S rRNA-intervening sequence protein - - - 0.0003874 48.0
DYD3_k127_302489_14 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.0007876 47.0
DYD3_k127_302489_2 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 578.0
DYD3_k127_302489_3 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 494.0
DYD3_k127_302489_4 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 GO:0003674,GO:0003824,GO:0004042,GO:0004358,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006592,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1,2.3.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000165 461.0
DYD3_k127_302489_5 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 441.0
DYD3_k127_302489_6 PhoQ Sensor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007217 333.0
DYD3_k127_302489_7 Acetyltransferase (GNAT) domain K03817 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005665 273.0
DYD3_k127_302489_8 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000003975 220.0
DYD3_k127_302489_9 Belongs to the P(II) protein family K04751 - - 0.000000000000000000000000000000000000000000000000000000009232 201.0
DYD3_k127_3031366_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07239 - - 5.233e-305 966.0
DYD3_k127_3031366_1 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 1.34e-238 751.0
DYD3_k127_3031366_10 Belongs to the glycosyl hydrolase family 6 K03932,K19668 - 3.2.1.91 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001078 301.0
DYD3_k127_3031366_11 GDSL-like Lipase/Acylhydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000898 291.0
DYD3_k127_3031366_12 Amidohydrolase K07045 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000178 280.0
DYD3_k127_3031366_13 Nitrate and nitrite sensing K03407 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000003671 289.0
DYD3_k127_3031366_14 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.000000000000000000000000000000000000000000000000000000000000000005665 241.0
DYD3_k127_3031366_15 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000003679 228.0
DYD3_k127_3031366_16 Haloacid dehalogenase-like hydrolase K01560 - 3.8.1.2 0.0000000000000000000000000000000000000000000000000000000002411 214.0
DYD3_k127_3031366_17 Glycosyl hydrolases family 16 - - - 0.000000000000000000000000000000000000000000000000000000346 209.0
DYD3_k127_3031366_18 Belongs to the glycosyl hydrolase family 6 K03932,K19668 - 3.2.1.91 0.00000000000000000000000000000000000000000000000000002713 210.0
DYD3_k127_3031366_19 Xylose operon regulatory protein K02529 - - 0.000000000000000000000000000000000000000000000001478 189.0
DYD3_k127_3031366_2 Belongs to the glycosyl hydrolase 43 family K01198,K01209 - 3.2.1.37,3.2.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001387 590.0
DYD3_k127_3031366_21 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) K03594 - 1.16.3.1 0.00000000000000000000000000000000000000000003523 171.0
DYD3_k127_3031366_22 PFAM conserved - - - 0.0000000000000000000000000000000000000000000526 169.0
DYD3_k127_3031366_23 Peptidase family M48 - - - 0.00000000000000000000000000000000000000001155 171.0
DYD3_k127_3031366_24 TRANSCRIPTIONal - - - 0.00000000000000000000000000000000000000002168 156.0
DYD3_k127_3031366_25 sequence-specific DNA binding K02099,K13529,K15051 - 3.2.2.21 0.0000000000000000000000000000000000000004518 160.0
DYD3_k127_3031366_26 cheY-homologous receiver domain K03413 - - 0.000000000000000000000000000004355 124.0
DYD3_k127_3031366_27 CBS domain K04767,K07168,K07182 - - 0.000000000000000000000000002813 117.0
DYD3_k127_3031366_28 - - - - 0.000000000000000000000000176 121.0
DYD3_k127_3031366_29 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) K03594 - 1.16.3.1 0.000000000000000000000004368 110.0
DYD3_k127_3031366_3 arylsulfatase activity K07014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009924 496.0
DYD3_k127_3031366_30 cheY-homologous receiver domain - - - 0.0000000000000000000001566 104.0
DYD3_k127_3031366_32 PFAM CBS domain containing protein - - - 0.00000000000000192 82.0
DYD3_k127_3031366_33 PFAM Outer membrane efflux protein K15725 - - 0.0000000002326 73.0
DYD3_k127_3031366_34 Arylsulfotransferase (ASST) - - - 0.000001901 61.0
DYD3_k127_3031366_35 Parallel beta-helix repeats - - - 0.000126 55.0
DYD3_k127_3031366_4 response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001673 397.0
DYD3_k127_3031366_5 IgA Peptidase M64 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003433 380.0
DYD3_k127_3031366_6 hydrolase family 62 protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 360.0
DYD3_k127_3031366_7 Regulator of chromosome condensation (RCC1) repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001811 365.0
DYD3_k127_3031366_8 xylan catabolic process K03932 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002385 323.0
DYD3_k127_3031366_9 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 307.0
DYD3_k127_304340_0 Angiotensin-converting enzyme K01283 - 3.4.15.1 4.654e-244 772.0
DYD3_k127_304340_1 XFP N-terminal domain K00615 - 2.2.1.1 2.316e-220 702.0
DYD3_k127_304340_11 Putative restriction endonuclease - - - 0.0000000000000000000000000000000000000000000000000000004497 199.0
DYD3_k127_304340_12 membrane - - - 0.00000000000000000000000000000000000000000000000001472 184.0
DYD3_k127_304340_13 TIGRFAM 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 - 3.1.3.45 0.000000000000000000000000000000000000000000000000853 191.0
DYD3_k127_304340_14 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000003249 161.0
DYD3_k127_304340_15 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000000000000000000000000000004229 143.0
DYD3_k127_304340_16 acetyltransferase - - - 0.00000000000000000000000000000001034 133.0
DYD3_k127_304340_17 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000000000000000000000000001298 135.0
DYD3_k127_304340_18 S4 RNA-binding domain K04762 - - 0.00000000000000000000000002878 113.0
DYD3_k127_304340_19 CDP-alcohol phosphatidyltransferase - - - 0.000000000000000000000753 103.0
DYD3_k127_304340_2 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00520 - 1.16.1.1 1.644e-216 680.0
DYD3_k127_304340_20 SET domain K07117 - - 0.00000000001673 73.0
DYD3_k127_304340_21 Protein of unknown function (DUF1439) - - - 0.000000009096 65.0
DYD3_k127_304340_3 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K01845 - 5.4.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000662 582.0
DYD3_k127_304340_4 Protein of unknown function (DUF1552) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004583 437.0
DYD3_k127_304340_5 PFAM N-acetylneuraminic acid synthase K01654 - 2.5.1.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005411 431.0
DYD3_k127_304340_6 Protein of unknown function (DUF1587) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 416.0
DYD3_k127_304340_7 iron ion binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000469 331.0
DYD3_k127_304340_8 oxidoreductase activity, acting on CH-OH group of donors - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004715 306.0
DYD3_k127_304340_9 Cytidylyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006255 275.0
DYD3_k127_3046115_0 Outer membrane protein beta-barrel family - - - 6.936e-230 748.0
DYD3_k127_3046115_1 domain, Protein - - - 0.00000000000000000000000000000000000000000000000000000000002106 226.0
DYD3_k127_3046115_2 Predicted methyltransferase regulatory domain - - - 0.00000000000000000000000000000000000000000000000000000007464 215.0
DYD3_k127_3083195_0 hydrolase, family 3 K05349 - 3.2.1.21 1.02e-308 960.0
DYD3_k127_3083195_1 secondary active sulfate transmembrane transporter activity - - - 3.429e-257 805.0
DYD3_k127_3083195_10 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001968 272.0
DYD3_k127_3083195_11 candidate b-glycosidase, glycoside hydrolase family 8 protein - - - 0.0000000000000000000000000000000000000000000000000000000005269 229.0
DYD3_k127_3083195_12 Belongs to the glycosyl hydrolase 67 family K01235 - 3.2.1.139 0.000000000000000000000000000000000000000000000003782 175.0
DYD3_k127_3083195_13 2-dehydro-3-deoxyphosphogluconate aldolase 4-hydroxy-2-oxoglutarate aldolase K01625 - 4.1.2.14,4.1.3.42 0.000000000000000000000000000000000000000000000004523 182.0
DYD3_k127_3083195_14 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K08323 - 4.2.1.8 0.000000000000000000000000000000000000000000000009907 173.0
DYD3_k127_3083195_15 protein containing a von Willebrand factor type A (vWA) domain - - - 0.000000000000000000000000000000000000000008117 169.0
DYD3_k127_3083195_16 SAF domain protein K01685 - 4.2.1.7 0.0000000000000000000000000000000006663 134.0
DYD3_k127_3083195_17 Stigma-specific protein, Stig1 - - - 0.00000000000000000000004316 116.0
DYD3_k127_3083195_18 mandelate racemase muconate lactonizing K08323 - 4.2.1.8 0.000003635 50.0
DYD3_k127_3083195_2 ABC-type dipeptide transport system periplasmic component K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 618.0
DYD3_k127_3083195_3 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003034 476.0
DYD3_k127_3083195_4 Belongs to the ABC transporter superfamily K02031 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002481 448.0
DYD3_k127_3083195_5 long-chain fatty acid transporting porin activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007327 404.0
DYD3_k127_3083195_6 pfkB family carbohydrate kinase K00874 - 2.7.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005134 380.0
DYD3_k127_3083195_7 Protein of unknown function (DUF1592) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009746 364.0
DYD3_k127_3083195_8 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001469 331.0
DYD3_k127_3083195_9 Belongs to the ABC transporter superfamily K02031,K02032,K10823,K10824 - 3.6.3.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000555 302.0
DYD3_k127_3120237_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003373 260.0
DYD3_k127_3120237_1 PFAM glutathione-dependent formaldehyde-activating - - - 0.00000000000000000000000000000000000009671 151.0
DYD3_k127_3120237_2 DNA-binding transcription factor activity - - - 0.0000000000000000000000000000000002267 136.0
DYD3_k127_3120237_3 YjbR - - - 0.00000000000000000000000000000003428 130.0
DYD3_k127_3120237_4 Bacterial PH domain - - - 0.00000000000000000000000009068 111.0
DYD3_k127_3120237_5 heme oxygenase (decyclizing) activity - - - 0.00000000000000000009581 98.0
DYD3_k127_3120693_0 MMPL family K07003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000464 532.0
DYD3_k127_3120693_1 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006173 345.0
DYD3_k127_3120693_2 D-isomer specific 2-hydroxyacid dehydrogenase K00018 - 1.1.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 334.0
DYD3_k127_3120693_3 Glycosyl transferases group 1 K13668 - 2.4.1.346 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001792 327.0
DYD3_k127_3120693_4 SMART Serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 312.0
DYD3_k127_3120693_5 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003631 275.0
DYD3_k127_3120693_6 GTP binding K06883 - - 0.000000000000000000000000000000000000001362 157.0
DYD3_k127_3120693_8 PFAM glycoside hydrolase family 10 - - - 0.000000000003871 68.0
DYD3_k127_3120693_9 Glycosyl hydrolase family 10 - - - 0.0000000006251 62.0
DYD3_k127_31291_0 Cytochrome C and Quinol oxidase polypeptide I K15862 - 1.9.3.1 0.0 1115.0
DYD3_k127_31291_1 Involved in the tonB-independent uptake of proteins K03641 - - 2.409e-276 876.0
DYD3_k127_31291_10 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.000000000000000000000000000007569 133.0
DYD3_k127_31291_11 Domain of Unknown Function (DUF1080) - - - 0.0000000000000000003488 102.0
DYD3_k127_31291_12 FixH - - - 0.0000000000000000006507 94.0
DYD3_k127_31291_13 - - - - 0.0000000000000000007434 100.0
DYD3_k127_31291_16 Cytochrome oxidase maturation protein cbb3-type - - - 0.0000000008047 68.0
DYD3_k127_31291_17 ATPases associated with a variety of cellular activities - - - 0.0002434 53.0
DYD3_k127_31291_2 Putative metal-binding domain of cation transport ATPase K01533 - 3.6.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007014 595.0
DYD3_k127_31291_3 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005002 441.0
DYD3_k127_31291_4 Protein of unknown function (DUF1592) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003515 296.0
DYD3_k127_31291_5 PFAM Endoribonuclease L-PSP - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002799 269.0
DYD3_k127_31291_6 CBD_II - - - 0.00000000000000000000000000000000000000000000000000000000000000005053 239.0
DYD3_k127_31291_7 Protein of unknown function (DUF1552) - - - 0.00000000000000000000000000000000000000000000000000000008285 212.0
DYD3_k127_31291_8 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000000000000000000006778 177.0
DYD3_k127_31291_9 N-terminal domain of cytochrome oxidase-cbb3, FixP K00406 - - 0.00000000000000000000000000000000000001441 154.0
DYD3_k127_3166300_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 4.962e-257 823.0
DYD3_k127_3166300_1 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 8.503e-217 684.0
DYD3_k127_3166300_10 Diguanylate cyclase - - - 0.00000000000000000000000003512 119.0
DYD3_k127_3166300_11 - - - - 0.0000000004854 70.0
DYD3_k127_3166300_12 SnoaL-like domain K06893 - - 0.00000004434 59.0
DYD3_k127_3166300_13 - - - - 0.0000001457 57.0
DYD3_k127_3166300_14 Response regulator receiver K03413 - - 0.0004054 48.0
DYD3_k127_3166300_2 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001622 554.0
DYD3_k127_3166300_3 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 329.0
DYD3_k127_3166300_4 FHA domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007662 326.0
DYD3_k127_3166300_5 Cyclic nucleotide-monophosphate binding domain K04739 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004475 276.0
DYD3_k127_3166300_6 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.00000000000000000000000000000000000000000000000000000000000000000001079 248.0
DYD3_k127_3166300_7 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.0000000000000000000000000000000000000000002482 171.0
DYD3_k127_3166300_8 cheY-homologous receiver domain - - - 0.00000000000000000000000000001643 127.0
DYD3_k127_3166300_9 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 - - 0.0000000000000000000000000103 114.0
DYD3_k127_3202521_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1175.0
DYD3_k127_3202521_1 C-terminal domain of alpha-glycerophosphate oxidase K00111 - 1.1.5.3 2.141e-223 717.0
DYD3_k127_3206689_0 O-Glycosyl hydrolase family 30 K18579 - 3.2.1.164 6.129e-203 666.0
DYD3_k127_3206689_1 Cation transport protein K03498 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009694 451.0
DYD3_k127_3206689_2 TrkA-C domain K03499 - - 0.000000000000000000000000000000000000000000000000000000000000007176 223.0
DYD3_k127_3206689_3 von Willebrand factor (vWF) type A domain - - - 0.00000000000001691 86.0
DYD3_k127_3206689_4 RNA polymerase sigma factor K03088 - - 0.00000000000001841 81.0
DYD3_k127_3206689_5 Belongs to the sigma-70 factor family. ECF subfamily - - - 0.00000000001075 76.0
DYD3_k127_321016_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.0 1469.0
DYD3_k127_321016_1 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 1.443e-301 944.0
DYD3_k127_321016_10 AAA domain - - - 0.000000000000000000000000000000000000000000000000000000000000001969 235.0
DYD3_k127_321016_11 FAD binding domain - - - 0.000000000000000000000000000000000000000000000000003526 198.0
DYD3_k127_321016_12 Major Facilitator - - - 0.0000000000000000000000000000000000000000009854 158.0
DYD3_k127_321016_13 DoxX-like family - - - 0.0000000000000000000000000000000003683 135.0
DYD3_k127_321016_15 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000001834 106.0
DYD3_k127_321016_2 Acetyl-CoA hydrolase/transferase N-terminal domain - - - 3.23e-252 794.0
DYD3_k127_321016_3 ATPase P-type (Transporting), HAD superfamily, subfamily IC K01535,K01537 - 3.6.3.6,3.6.3.8 2.006e-251 800.0
DYD3_k127_321016_4 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009681 390.0
DYD3_k127_321016_5 Catalyzes the conversion of dihydroorotate to orotate K00226 - 1.3.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 391.0
DYD3_k127_321016_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002706 295.0
DYD3_k127_321016_7 ABC1 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001382 259.0
DYD3_k127_321016_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000354 255.0
DYD3_k127_321016_9 ATPases associated with a variety of cellular activities K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000001353 239.0
DYD3_k127_3219477_0 polysaccharide biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 358.0
DYD3_k127_3219477_1 Nucleoside-diphosphate-sugar pyrophosphorylase family protein K00978 - 2.7.7.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001832 333.0
DYD3_k127_3219477_10 Trm112p-like protein K09791 - - 0.00003703 55.0
DYD3_k127_3219477_2 PFAM glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 337.0
DYD3_k127_3219477_3 NAD dependent epimerase dehydratase family K19180 - 1.1.1.339 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003189 308.0
DYD3_k127_3219477_4 Acyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000001915 225.0
DYD3_k127_3219477_5 PFAM aldo keto reductase - - - 0.00000000000000000000000000000000000000000000004086 185.0
DYD3_k127_3219477_6 PFAM transferase hexapeptide repeat containing protein K00661 - 2.3.1.79 0.00000000000000000000000000000000003527 151.0
DYD3_k127_3219477_7 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000004634 125.0
DYD3_k127_3219477_8 methyltransferase - - - 0.0000000000000000001661 100.0
DYD3_k127_3219477_9 GMC oxidoreductase - - - 0.000000000000000332 86.0
DYD3_k127_3222052_0 oligosaccharyl transferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005055 460.0
DYD3_k127_3222052_1 Aldo Keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008027 325.0
DYD3_k127_3222052_2 Tetratricopeptide repeats - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001181 283.0
DYD3_k127_3222052_3 Outer membrane protein (OmpH-like) K06142 - - 0.000000000000000000000000000000000000000000000000000522 191.0
DYD3_k127_3222052_4 Inositol monophosphatase family K01082 - 3.1.3.7 0.000000000000000000000000000000000000000000000000002368 202.0
DYD3_k127_3222052_5 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234 2.1.1.33 0.0000000000000000000006079 100.0
DYD3_k127_323105_0 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K13924 - 2.1.1.80,3.1.1.61 1.055e-269 889.0
DYD3_k127_323105_1 ATP dependent DNA ligase domain protein K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003016 612.0
DYD3_k127_323105_2 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002216 305.0
DYD3_k127_323105_3 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007273 289.0
DYD3_k127_323105_4 PFAM glycoside hydrolase, family 10 K01181 - 3.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000164 282.0
DYD3_k127_323105_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000005305 239.0
DYD3_k127_323105_6 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000001053 91.0
DYD3_k127_323105_7 - K13652 - - 0.0000001685 61.0
DYD3_k127_3249150_0 Bacterial regulatory protein, Fis family K02584 - - 3.129e-226 714.0
DYD3_k127_3249150_1 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000433 423.0
DYD3_k127_3249150_2 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003568 332.0
DYD3_k127_3249150_3 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009491 304.0
DYD3_k127_3249150_4 Sh3 type 3 domain protein K01185,K07184,K07260 - 3.2.1.17,3.4.17.14 0.000000000000000000000000000000000000000006264 177.0
DYD3_k127_3249150_5 Putative esterase K07017 - - 0.000000000000000000000000000000000000002912 154.0
DYD3_k127_3249150_6 Heavy-metal resistance - - - 0.000000000000000000000000001182 122.0
DYD3_k127_3249150_8 Trypsin-like serine protease - - - 0.0000000000000008966 91.0
DYD3_k127_3249150_9 - - - - 0.000000005384 58.0
DYD3_k127_3266226_0 NeuB family K01654,K15898,K18430 - 2.5.1.101,2.5.1.56,2.5.1.97 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008299 441.0
DYD3_k127_3266226_1 PFAM NAD-dependent epimerase dehydratase K08679 - 5.1.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000381 345.0
DYD3_k127_3266226_10 Methyltransferase - - - 0.0000002726 61.0
DYD3_k127_3266226_2 ABC-type multidrug transport system ATPase and permease K06147,K11085 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001179 275.0
DYD3_k127_3266226_3 Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM) K15256 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002482 252.0
DYD3_k127_3266226_4 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000105 231.0
DYD3_k127_3266226_5 Acyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000003456 221.0
DYD3_k127_3266226_6 Cytidylyltransferase K07257 - - 0.000000000000000000000000000000000000000007303 164.0
DYD3_k127_3266226_7 - - - - 0.0000000000000000000000000000000001014 150.0
DYD3_k127_3266226_8 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3 0.0000000000000000000000000000003285 130.0
DYD3_k127_3266226_9 COG3980 Spore coat polysaccharide biosynthesis protein - - - 0.00000000000000000003761 102.0
DYD3_k127_3285679_0 Belongs to the glycosyl hydrolase 31 family K01811 - 3.2.1.177 6.013e-265 841.0
DYD3_k127_3285679_1 Lamin Tail Domain - - - 1.225e-204 667.0
DYD3_k127_3285679_10 inorganic phosphate transmembrane transporter activity K02037,K02038 GO:0008150,GO:0040007,GO:0044110,GO:0044116,GO:0044117,GO:0044403,GO:0044419,GO:0051704 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001714 294.0
DYD3_k127_3285679_11 Glycoside hydrolase family 44 - - - 0.000000000000000000000000000000000000000000000000000000000000000271 250.0
DYD3_k127_3285679_12 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000001055 185.0
DYD3_k127_3285679_13 - - - - 0.00000000000000000000000000000000000000000249 174.0
DYD3_k127_3285679_14 Glycosyl transferases group 1 - - - 0.0000000000000000000000001256 122.0
DYD3_k127_3285679_15 Divergent 4Fe-4S mono-cluster K05337 - - 0.0000000000000000002224 93.0
DYD3_k127_3285679_16 Phospholipid-binding protein K06910 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044424,GO:0044464 - 0.0000000000004851 80.0
DYD3_k127_3285679_17 nucleoside-diphosphate sugar epimerase - - - 0.0000007086 54.0
DYD3_k127_3285679_2 long-chain fatty acid transporting porin activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001572 515.0
DYD3_k127_3285679_3 Belongs to the glycosyl hydrolase family 6 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000398 490.0
DYD3_k127_3285679_4 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 473.0
DYD3_k127_3285679_5 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003436 396.0
DYD3_k127_3285679_6 protein kinase activity K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004112 392.0
DYD3_k127_3285679_7 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003636 357.0
DYD3_k127_3285679_8 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008109 341.0
DYD3_k127_3285679_9 Histidine kinase K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000243 332.0
DYD3_k127_330691_0 protein kinase activity - - - 2.815e-272 846.0
DYD3_k127_330691_1 Surface antigen - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 518.0
DYD3_k127_330691_10 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K01104 - 3.1.3.48 0.00000000000000000000000000000000000000000000000000000001209 205.0
DYD3_k127_330691_11 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus K04760 - - 0.0000000000000000000000000000000000000000000000000006449 188.0
DYD3_k127_330691_12 gluconolactonase activity - - - 0.0000000000000000000000000000000000001116 164.0
DYD3_k127_330691_13 - - - - 0.0000000000000000000000000000000000001366 151.0
DYD3_k127_330691_14 - - - - 0.0000000000000000000000000000000008928 141.0
DYD3_k127_330691_17 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000001864 128.0
DYD3_k127_330691_18 6-phosphogluconolactonase activity - - - 0.000000000000000001933 100.0
DYD3_k127_330691_2 4-alpha-glucanotransferase K00705 - 2.4.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 490.0
DYD3_k127_330691_21 TIGRFAM siroheme synthase K02304 - 1.3.1.76,4.99.1.4 0.000000000000137 81.0
DYD3_k127_330691_22 Zinc metalloprotease (Elastase) K20274 - - 0.0000000005451 73.0
DYD3_k127_330691_23 Putative metal-binding motif - - - 0.0002336 55.0
DYD3_k127_330691_3 Vault protein inter-alpha-trypsin domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 408.0
DYD3_k127_330691_4 Family membership K08884 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003964 378.0
DYD3_k127_330691_5 Enoyl-(Acyl carrier protein) reductase K13775 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 364.0
DYD3_k127_330691_6 Fructosamine kinase - GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0044237 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003342 305.0
DYD3_k127_330691_7 protein trimerization - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003136 284.0
DYD3_k127_330691_8 PFAM Integral membrane protein TerC K05794 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005709 280.0
DYD3_k127_330691_9 Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon K01885,K01894 - 6.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000003438 237.0
DYD3_k127_3340617_0 Domain of unknown function (DUF3416) K16147 - 2.4.99.16 4.936e-229 726.0
DYD3_k127_3340617_1 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues K01299 - 3.4.17.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009181 558.0
DYD3_k127_3340617_2 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007091 267.0
DYD3_k127_3340617_3 serine-type endopeptidase activity K07261 - - 0.00000000000000000000000000000000000000000001224 183.0
DYD3_k127_3345861_0 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 456.0
DYD3_k127_3345861_10 leucine-rich repeat-containing protein typical subtype K13730 - - 0.000000000000005734 86.0
DYD3_k127_3345861_2 DNA helicase K03657 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 314.0
DYD3_k127_3345861_3 Reduction of activated sulfate into sulfite K00390 - 1.8.4.10,1.8.4.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 302.0
DYD3_k127_3345861_4 gluconolactonase activity K14274 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005273 254.0
DYD3_k127_3345861_5 Alpha/beta hydrolase family K06999 - - 0.00000000000000000000000000000000000000000000000000000000000002165 223.0
DYD3_k127_3345861_6 Sir2 family K12410 - - 0.00000000000000000000000000000000000000000000000000000001446 206.0
DYD3_k127_3345861_7 - - - - 0.0000000000000000000000000000000000000000000000000001499 194.0
DYD3_k127_3345861_8 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000000000000001804 138.0
DYD3_k127_3345861_9 SnoaL-like domain - - - 0.000000000000000000000000000001346 121.0
DYD3_k127_3360660_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002528 323.0
DYD3_k127_3360660_1 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000006265 235.0
DYD3_k127_3360660_2 PFAM Formylglycine-generating sulfatase enzyme - - - 0.00000005087 65.0
DYD3_k127_3395692_1 ABC transporter, ATP-binding protein K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001729 383.0
DYD3_k127_3395692_2 ATPase associated with K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006565 347.0
DYD3_k127_3404997_0 PFAM sigma-54 factor interaction domain-containing protein K07712 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002047 366.0
DYD3_k127_3404997_1 Band 7 protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 312.0
DYD3_k127_3404997_2 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001248 248.0
DYD3_k127_3404997_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000416 228.0
DYD3_k127_3404997_4 Histidine kinase K07641,K07711 GO:0000155,GO:0000160,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0007584,GO:0008150,GO:0008152,GO:0009605,GO:0009987,GO:0009991,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0031667,GO:0035556,GO:0036211,GO:0042221,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071704,GO:0071944,GO:0140096,GO:1901564 2.7.13.3 0.0000000000000000000000000000000000000000000000004105 195.0
DYD3_k127_3404997_5 Protein of unknown function (DUF1449) - - - 0.000001304 58.0
DYD3_k127_3417525_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 3.568e-234 734.0
DYD3_k127_3417525_1 Belongs to the citrate synthase family K01647 - 2.3.3.1 3.269e-200 636.0
DYD3_k127_3417525_10 Belongs to the PstS family K02040 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000546 278.0
DYD3_k127_3417525_11 Prephenate dehydratase K04518,K14170 - 4.2.1.51,5.4.99.5 0.000000000000000000000000000000000000000000000000000000000000000000002021 256.0
DYD3_k127_3417525_12 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000001717 200.0
DYD3_k127_3417525_13 Transglutaminase-like superfamily - - - 0.000000000000000000000000000000000000000000000000006479 202.0
DYD3_k127_3417525_14 Protein of unknown function (DUF502) - - - 0.000000000000000000000000000000000000000000000000007591 186.0
DYD3_k127_3417525_15 Methyltransferase - - - 0.000000000000000000000000000000000000000000000002939 180.0
DYD3_k127_3417525_16 Forkhead associated domain - - - 0.00000000000000000000000000000000000000000003993 172.0
DYD3_k127_3417525_17 Peptidyl-prolyl cis-trans isomerase K01802,K03772 - 5.2.1.8 0.000000000000000000000000000000000000008463 152.0
DYD3_k127_3417525_18 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000004032 106.0
DYD3_k127_3417525_19 Sterol carrier protein - - - 0.00000000000000000001284 100.0
DYD3_k127_3417525_2 ErfK ybiS ycfS ynhG family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 546.0
DYD3_k127_3417525_20 Protein of unknown function (DUF533) K11962 - - 0.00000000000000000008669 96.0
DYD3_k127_3417525_21 COG2801 Transposase and inactivated derivatives - - - 0.0000000005092 67.0
DYD3_k127_3417525_3 udp-glucose 4-epimerase K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006342 520.0
DYD3_k127_3417525_4 Mycolic acid cyclopropane synthetase K00574,K20238 - 2.1.1.317,2.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001986 443.0
DYD3_k127_3417525_5 Domain of unknown function (DUF4139) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005042 443.0
DYD3_k127_3417525_6 Domain of unknown function (DUF4139) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000146 431.0
DYD3_k127_3417525_7 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006043 390.0
DYD3_k127_3417525_8 ROK family K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001657 319.0
DYD3_k127_3417525_9 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005842 294.0
DYD3_k127_3474376_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 1.323e-196 631.0
DYD3_k127_3474376_1 PFAM tRNA synthetases class II (D, K and N) K01893 - 6.1.1.22 1.287e-194 615.0
DYD3_k127_3474376_2 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001373 380.0
DYD3_k127_3474376_3 Belongs to the glycosyl hydrolase 30 family - - - 0.000000000000000000000000000000000000000000000000000000003189 218.0
DYD3_k127_3474376_4 Forkhead associated domain - - - 0.0000000000001988 83.0
DYD3_k127_3474376_5 - - - - 0.00000001357 66.0
DYD3_k127_349119_0 COG0367 Asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 1.789e-256 804.0
DYD3_k127_349119_1 ATP-grasp K03802 - 6.3.2.29,6.3.2.30 7.951e-220 702.0
DYD3_k127_349119_10 fatty acid desaturase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 300.0
DYD3_k127_349119_11 DTW K05812 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001012 274.0
DYD3_k127_349119_12 GMC oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000007489 248.0
DYD3_k127_349119_13 Belongs to the ABC transporter superfamily K02031,K02032 - - 0.0000000000000000000000000000000000000000000000000000000000003154 229.0
DYD3_k127_349119_14 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000000000000000006218 193.0
DYD3_k127_349119_15 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000001097 138.0
DYD3_k127_349119_16 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K03741 - 1.20.4.1 0.0000000000000000000000001544 106.0
DYD3_k127_349119_17 Lysylphosphatidylglycerol synthase TM region - - - 0.00000000000000000000000368 117.0
DYD3_k127_349119_18 Domain of unknown function (DUF4833) - - - 0.000000000000000002712 92.0
DYD3_k127_349119_19 Arylsulfotransferase (ASST) - - - 0.000773 52.0
DYD3_k127_349119_2 COG0747 ABC-type dipeptide transport system, periplasmic component K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005911 578.0
DYD3_k127_349119_3 peptidase M42 family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 471.0
DYD3_k127_349119_4 Belongs to the ABC transporter superfamily K02031,K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007647 485.0
DYD3_k127_349119_5 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00836 - 2.6.1.76 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004798 426.0
DYD3_k127_349119_6 Trypsin-like peptidase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002063 358.0
DYD3_k127_349119_7 COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003509 337.0
DYD3_k127_349119_8 GH3 auxin-responsive promoter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004569 341.0
DYD3_k127_349119_9 Methyltransferase type 11 K07755 - 2.1.1.137 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007919 306.0
DYD3_k127_351031_0 CoA-substrate-specific enzyme activase - - - 0.0 1435.0
DYD3_k127_351031_1 4 iron, 4 sulfur cluster binding - - - 2.535e-216 690.0
DYD3_k127_351031_11 COGs COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.00001253 56.0
DYD3_k127_351031_12 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.0001519 53.0
DYD3_k127_351031_13 COG2217 Cation transport ATPase K17686 - 3.6.3.54 0.0003556 52.0
DYD3_k127_351031_2 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787,K15726 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003421 619.0
DYD3_k127_351031_3 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001634 305.0
DYD3_k127_351031_4 COG5285 Protein involved in biosynthesis of mitomycin antibiotics polyketide fumonisin K00477 - 1.14.11.18 0.0000000000000000000000000000000000000000000000000000001301 203.0
DYD3_k127_351031_5 PFAM LemA K03744 - - 0.000000000000000000000000000000000000000000000000000008974 197.0
DYD3_k127_351031_6 Beta-propeller domains of methanol dehydrogenase type K06872 - - 0.000000000000000000000000000000000000000000001863 178.0
DYD3_k127_351031_7 Membrane K08988 - - 0.0000000000000000000000000505 118.0
DYD3_k127_351031_8 cell redox homeostasis - - - 0.000000000000000006567 94.0
DYD3_k127_3512997_0 ErfK ybiS ycfS ynhG family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 400.0
DYD3_k127_3512997_1 Belongs to the methyltransferase superfamily K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002038 395.0
DYD3_k127_3512997_2 Short-chain dehydrogenase reductase sdr - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002234 321.0
DYD3_k127_3512997_3 CBS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009981 330.0
DYD3_k127_3512997_4 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.000000000000000000000000000000000000000000000000000000000000000000003334 241.0
DYD3_k127_3512997_5 Bacterial protein of unknown function (DUF924) - - - 0.00000000000000000000000000000000000000000000000405 182.0
DYD3_k127_3512997_6 - - - - 0.000000000000002702 79.0
DYD3_k127_3533304_0 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001241 275.0
DYD3_k127_3533304_1 AAA domain - - - 0.00000000000000000000000000000000000000000000000000000207 196.0
DYD3_k127_3533304_2 Outer membrane lipoprotein-sorting protein - - - 0.00000000000000000000000000000000000000000000000001487 192.0
DYD3_k127_3533304_3 of the RND superfamily K07003 - - 0.00000000000000000000000000000000000000000000000008913 204.0
DYD3_k127_3533304_4 Helix-turn-helix XRE-family like proteins - - - 0.00000000000000000000000000000000000000003947 162.0
DYD3_k127_3533304_5 - - - - 0.0000000004261 73.0
DYD3_k127_3539882_0 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.0 1367.0
DYD3_k127_3539882_1 PrkA AAA domain K07180 - - 0.0 1138.0
DYD3_k127_3539882_10 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003302 341.0
DYD3_k127_3539882_11 deoxyhypusine monooxygenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001957 338.0
DYD3_k127_3539882_12 ABC transporter K01990,K09695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002548 304.0
DYD3_k127_3539882_13 Fatty acid desaturase K00507 - 1.14.19.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002582 298.0
DYD3_k127_3539882_14 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001189 296.0
DYD3_k127_3539882_15 Nucleotidyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006903 277.0
DYD3_k127_3539882_16 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009169 297.0
DYD3_k127_3539882_17 Belongs to the glycosyl hydrolase family 6 K01179 - 3.2.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001198 282.0
DYD3_k127_3539882_18 Protein of unknown function (DUF1588) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000332 293.0
DYD3_k127_3539882_19 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000001204 249.0
DYD3_k127_3539882_2 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 1.293e-215 693.0
DYD3_k127_3539882_20 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000001292 246.0
DYD3_k127_3539882_21 Alg9-like mannosyltransferase family K05286 - - 0.0000000000000000000000000000000000000000000000000000000000000006441 248.0
DYD3_k127_3539882_22 hydrolase, HAD-superfamily, subfamily IIIA K03273 - 3.1.3.82,3.1.3.83 0.00000000000000000000000000000000000000000000000000000000000000228 223.0
DYD3_k127_3539882_23 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family K13687 - - 0.0000000000000000000000000000000000000000000000000000000000000158 243.0
DYD3_k127_3539882_24 Plays a role in the regulation of phosphate uptake K02039 - - 0.00000000000000000000000000000000000000000000000000000000000006589 220.0
DYD3_k127_3539882_25 protein conserved in cyanobacteria - - - 0.00000000000000000000000000000000000000000000000000000000001289 219.0
DYD3_k127_3539882_26 protein conserved in cyanobacteria - - - 0.00000000000000000000000000000000000000000000000000000000002104 213.0
DYD3_k127_3539882_27 Domain of unknown function (DUF4398) - - - 0.0000000000000000000000000000000000000000000000000000000001301 222.0
DYD3_k127_3539882_28 regulation of DNA-templated transcription, elongation - - - 0.0000000000000000000000000000000000000000000000000000000002614 218.0
DYD3_k127_3539882_3 Transcriptional regulator, Fis family - - - 6.28e-203 649.0
DYD3_k127_3539882_30 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000001846 211.0
DYD3_k127_3539882_31 - - - - 0.000000000000000000000000000000000000000000000000001585 201.0
DYD3_k127_3539882_32 PFAM glutathione-dependent formaldehyde-activating - - - 0.00000000000000000000000000000000000000000007729 163.0
DYD3_k127_3539882_33 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000004081 162.0
DYD3_k127_3539882_35 - - - - 0.00000000000000000000000000000005447 142.0
DYD3_k127_3539882_36 Stigma-specific protein, Stig1 - - - 0.000000000000000000000000000001179 136.0
DYD3_k127_3539882_37 Transglycosylase associated protein - - - 0.00000000000000000006856 91.0
DYD3_k127_3539882_38 Tetratricopeptide repeat - - - 0.00000000000000003505 95.0
DYD3_k127_3539882_39 ABC transporter K06147 - - 0.0000000000001029 73.0
DYD3_k127_3539882_4 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K06147 - - 2.147e-196 631.0
DYD3_k127_3539882_40 - - - - 0.0000000000002822 83.0
DYD3_k127_3539882_42 Bacterial membrane protein, YfhO - - - 0.000000000001632 77.0
DYD3_k127_3539882_43 Domain of unknown function (DUF4398) - - - 0.0000000001783 69.0
DYD3_k127_3539882_44 Transglycosylase associated protein - - - 0.000001632 57.0
DYD3_k127_3539882_45 Protein of unknown function (DUF1059) - - - 0.0005096 49.0
DYD3_k127_3539882_5 Sigma-54 interaction domain K02584 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003784 537.0
DYD3_k127_3539882_6 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 519.0
DYD3_k127_3539882_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001837 499.0
DYD3_k127_3539882_8 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001861 472.0
DYD3_k127_3539882_9 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004297 455.0
DYD3_k127_354135_0 Glucuronate isomerase K01812 GO:0005975,GO:0005996,GO:0006063,GO:0006064,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016052,GO:0016054,GO:0019585,GO:0019586,GO:0019698,GO:0019752,GO:0032787,GO:0042839,GO:0042840,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046365,GO:0046395,GO:0046396,GO:0046397,GO:0071704,GO:0072329,GO:1901575 5.3.1.12 2.142e-204 646.0
DYD3_k127_354135_2 Glycosyl hydrolase family 9 K01179 - 3.2.1.4 0.000000000000000000000000009293 120.0
DYD3_k127_354135_3 23S rRNA-intervening sequence protein - - - 0.00000000000003626 76.0
DYD3_k127_354135_4 Involved in the biosynthesis of porphyrin-containing compound - - - 0.00000000001597 66.0
DYD3_k127_3572302_0 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 431.0
DYD3_k127_3572302_1 Belongs to the N(4) N(6)-methyltransferase family K00571 - 2.1.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005078 309.0
DYD3_k127_3572302_2 Penicillin-insensitive murein endopeptidase K07261 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002053 265.0
DYD3_k127_3572302_3 COG2801 Transposase and inactivated derivatives K07497 - - 0.00000000002168 71.0
DYD3_k127_3572302_4 RNA polymerase II transcriptional preinitiation complex assembly - - - 0.000000002915 69.0
DYD3_k127_3577744_0 PFAM glycoside hydrolase, family 1 K05350 - 3.2.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006343 487.0
DYD3_k127_3577744_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005595 325.0
DYD3_k127_3577744_10 23S rRNA-intervening sequence protein - - - 0.0005045 47.0
DYD3_k127_3577744_2 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 341.0
DYD3_k127_3577744_3 Two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07713 - - 0.00000000000000000000000000000000000000000000000000000000000001972 231.0
DYD3_k127_3577744_4 Family membership K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000006551 228.0
DYD3_k127_3577744_5 Zinc-dependent metalloprotease - - - 0.0000000000000000000000000000000000000000000000002553 188.0
DYD3_k127_3577744_6 Domain of unknown function (DUF4215) - - - 0.0000000000000000000000000000000000000000001031 183.0
DYD3_k127_3577744_7 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000001704 165.0
DYD3_k127_3577744_8 Lipocalin-like domain K03098 - - 0.0000000000000000000000000000006141 131.0
DYD3_k127_3581044_0 Glycosyl hydrolase 36 superfamily, catalytic domain K13688 - - 0.0 2132.0
DYD3_k127_3581044_1 Helicase - - - 8.637e-247 768.0
DYD3_k127_3581044_10 von Willebrand factor (vWF) type A domain - - - 0.000000000000000000000000000000000000000000000000000000000000155 227.0
DYD3_k127_3581044_11 carboxylic ester hydrolase activity - - - 0.000000000000000000000000000000000000000000000000000000000000613 223.0
DYD3_k127_3581044_12 Tryptophan dimethylallyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000006021 216.0
DYD3_k127_3581044_13 PilT protein domain protein - - - 0.0000000000000000000000000000000000000000000000000000000008603 209.0
DYD3_k127_3581044_14 Belongs to the glycosyl hydrolase 8 (cellulase D) family - - - 0.00000000000000000000000000000000000000000000000000000001249 219.0
DYD3_k127_3581044_15 GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000001199 199.0
DYD3_k127_3581044_17 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040008,GO:0044464,GO:0045926,GO:0048519,GO:0050789,GO:0065007,GO:0071944 - 0.0000000000000000000000000000000000000000000002798 174.0
DYD3_k127_3581044_18 PFAM UspA domain protein - - - 0.00000000000000000000000000002421 130.0
DYD3_k127_3581044_19 AI-2E family transporter - - - 0.00000000000000000000000000005149 130.0
DYD3_k127_3581044_2 Carboxypeptidase regulatory-like domain - - - 7.196e-217 709.0
DYD3_k127_3581044_20 - - GO:0008150,GO:0040008,GO:0045927,GO:0048518,GO:0050789,GO:0065007 - 0.00000000000000000009906 93.0
DYD3_k127_3581044_21 Chorismate mutase type II K04093 - 5.4.99.5 0.000000000000000004032 87.0
DYD3_k127_3581044_22 - - - - 0.000000002863 65.0
DYD3_k127_3581044_3 Beta-eliminating lyase K01667 - 4.1.99.1 1.32e-197 626.0
DYD3_k127_3581044_4 Acyl-CoA dehydrogenase, C-terminal domain K00248 - 1.3.8.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005993 571.0
DYD3_k127_3581044_5 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002808 545.0
DYD3_k127_3581044_6 PFAM FAD linked oxidase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 423.0
DYD3_k127_3581044_7 SWIM zinc finger - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005761 394.0
DYD3_k127_3581044_8 Belongs to the glycosyl hydrolase 3 family K05349 - 3.2.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001968 388.0
DYD3_k127_3581044_9 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004719 287.0
DYD3_k127_3599420_0 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002303 484.0
DYD3_k127_3599420_1 domain, Protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009235 492.0
DYD3_k127_3599420_2 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008703 310.0
DYD3_k127_3599420_3 Predicted membrane protein (DUF2085) - - - 0.000000000257 72.0
DYD3_k127_3640981_0 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA K03582,K16898 - 3.1.11.5,3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 610.0
DYD3_k127_3640981_1 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity K03583 - 3.1.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002789 551.0
DYD3_k127_3640981_2 PFAM Formylglycine-generating sulfatase enzyme K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008725 490.0
DYD3_k127_3640981_3 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668 445.0
DYD3_k127_3640981_4 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD K03581 - 3.1.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001602 409.0
DYD3_k127_3640981_5 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.0000000000000000000000000000000000000000000000000000000000000000003133 232.0
DYD3_k127_3640981_6 PKD domain - - - 0.000000000000000000000000000002249 136.0
DYD3_k127_3640981_7 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.000000000000000000000001919 109.0
DYD3_k127_3641589_0 COG0451 Nucleoside-diphosphate-sugar epimerases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002275 367.0
DYD3_k127_3641589_1 Transcriptional regulator, LysR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001712 359.0
DYD3_k127_3641589_2 Bacterial regulatory helix-turn-helix protein, lysR family K04761 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 293.0
DYD3_k127_3641589_3 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004898 270.0
DYD3_k127_3641589_4 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000000000000000000000000001043 194.0
DYD3_k127_3641589_5 Bacterial regulatory helix-turn-helix protein, lysR family K04761 - - 0.00000000000000000000000000000003736 126.0
DYD3_k127_3641589_6 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.000000000000000000000000007581 116.0
DYD3_k127_3641589_7 Flavin containing amine oxidoreductase - - - 0.00000000000000000000006806 102.0
DYD3_k127_3641589_8 Ketosteroid isomerase-related protein - - - 0.000000000000000006309 88.0
DYD3_k127_3661289_0 B12 binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001413 294.0
DYD3_k127_3661289_1 cobalamin binding K03496,K22491 - - 0.000000000000000000000000000000000000000000000000000000002869 209.0
DYD3_k127_3661289_2 peptidyl-prolyl cis-trans isomerase activity K02597,K03769,K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000003284 209.0
DYD3_k127_3661289_3 Zn-dependent hydrolases of the beta-lactamase fold - - - 0.00000000000000000000000000001895 130.0
DYD3_k127_3661289_4 Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ K00836,K06137 - 1.3.3.11,2.6.1.76 0.00000000000000000000000000002571 130.0
DYD3_k127_3668628_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 4.831e-265 826.0
DYD3_k127_3668628_1 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009571 464.0
DYD3_k127_3668628_2 arylsulfatase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001873 374.0
DYD3_k127_3678235_0 ABC-type transport system involved in lipoprotein release permease component K09808 - - 4.584e-194 619.0
DYD3_k127_3678235_1 tRNA nucleotidyltransferase domain 2 putative K00970,K00974 - 2.7.7.19,2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005396 577.0
DYD3_k127_3678235_2 Serine Threonine protein kinase K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004457 417.0
DYD3_k127_3678235_3 Serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001546 338.0
DYD3_k127_3678235_4 cheY-homologous receiver domain K07657 - - 0.0000000000000000000000000000000000000000008635 166.0
DYD3_k127_3690062_0 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 490.0
DYD3_k127_3690062_1 threonyl-tRNA aminoacylation K01868 - 6.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004874 453.0
DYD3_k127_3690062_2 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008 - 0.000000000000000000000000000000000000000000000000000000000000000000000000007967 259.0
DYD3_k127_3712525_0 BNR repeat-containing family member - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002505 392.0
DYD3_k127_3712525_1 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002706 380.0
DYD3_k127_3712525_2 PAS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004575 342.0
DYD3_k127_3712525_3 DNA polymerase III K02341 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004162 311.0
DYD3_k127_3712525_4 peptidyl-tyrosine sulfation - - - 0.0000000000000000003995 103.0
DYD3_k127_3751275_0 gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002 451.0
DYD3_k127_3751275_1 Calcineurin-like phosphoesterase K07098 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001879 394.0
DYD3_k127_3751275_10 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.0000000000000000000000000001853 118.0
DYD3_k127_3751275_11 CHAD - - - 0.0000000000000000000392 102.0
DYD3_k127_3751275_12 Domain of unknown function (DU1801) - - - 0.000000000000000001247 93.0
DYD3_k127_3751275_13 FAD binding domain - - - 0.000002813 54.0
DYD3_k127_3751275_2 Protein of unknown function (DUF1592) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004438 366.0
DYD3_k127_3751275_3 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009804 286.0
DYD3_k127_3751275_4 PAS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000179 287.0
DYD3_k127_3751275_5 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002306 286.0
DYD3_k127_3751275_7 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000001032 225.0
DYD3_k127_3751275_8 Haloacid dehalogenase-like hydrolase K01838 - 5.4.2.6 0.00000000000000000000000000000000000000000000002764 178.0
DYD3_k127_3751275_9 Protein of unknown function (DUF971) K03593 - - 0.00000000000000000000000000000000000005827 146.0
DYD3_k127_3751571_0 penicillin-binding protein K05366 - 2.4.1.129,3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005204 604.0
DYD3_k127_3751571_1 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 466.0
DYD3_k127_3751571_2 Multi-copper polyphenol oxidoreductase laccase K05810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002093 255.0
DYD3_k127_3751571_3 PFAM Peptidase M11 gametolysin - - - 0.00000000000000000000000000000000000005553 164.0
DYD3_k127_3751571_4 cellulose binding - - - 0.0000000000000000000000000000000000002735 160.0
DYD3_k127_3758650_0 Glycosyl hydrolase family 9 K01179 - 3.2.1.4 6.561e-248 783.0
DYD3_k127_3758650_1 CHASE3 domain - - - 1.881e-197 657.0
DYD3_k127_3758650_11 phosphate ion binding K02040 - - 0.000000000000000000000002202 111.0
DYD3_k127_3758650_12 - - - - 0.0000000000000007736 91.0
DYD3_k127_3758650_13 PFAM SMP-30 Gluconolaconase - - - 0.0000000001276 67.0
DYD3_k127_3758650_14 - - - - 0.0001866 53.0
DYD3_k127_3758650_2 Belongs to the glycosyl hydrolase family 6 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002513 446.0
DYD3_k127_3758650_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005063 424.0
DYD3_k127_3758650_4 long-chain fatty acid transporting porin activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001862 377.0
DYD3_k127_3758650_5 PFAM CheR methyltransferase, SAM binding domain K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005745 295.0
DYD3_k127_3758650_6 His Kinase A (phosphoacceptor) domain K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007539 306.0
DYD3_k127_3758650_7 Esterase PHB depolymerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003088 286.0
DYD3_k127_3758650_8 EAL domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003438 279.0
DYD3_k127_3758650_9 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.000000000000000000000000000000000000000000000000000000000000002193 234.0
DYD3_k127_3761425_0 Protein kinase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001513 339.0
DYD3_k127_3761425_1 Sigma-54 dependent transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001574 263.0
DYD3_k127_3761425_2 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000000000000000000000005715 191.0
DYD3_k127_3761425_3 protein trimerization - - - 0.000000000000000000000000000000000000003436 159.0
DYD3_k127_3761425_4 Belongs to the glycosyl hydrolase family 6 - - - 0.00000000000000000005797 101.0
DYD3_k127_3761425_5 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K00950,K13940 - 2.7.6.3,4.1.2.25 0.0000001207 61.0
DYD3_k127_3762048_0 UPF0365 protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009301 482.0
DYD3_k127_3762048_1 nitric oxide reductase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009414 252.0
DYD3_k127_3762048_2 Regulator of chromosome condensation - - - 0.0000000000000000000000000000000000000000000000000000000000001928 242.0
DYD3_k127_3762048_3 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000001706 140.0
DYD3_k127_3762048_4 Sulphur transport K07112 - - 0.0000000000000000000005102 105.0
DYD3_k127_3762048_5 Sulphur transport K07112 - - 0.000000000000001677 82.0
DYD3_k127_3762048_8 Putative mono-oxygenase ydhR - - - 0.0000004655 57.0
DYD3_k127_3792373_0 C-terminal, D2-small domain, of ClpB protein K03696 - - 3.93e-250 797.0
DYD3_k127_3792373_1 Periplasmic protein TonB links inner and outer membranes - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003477 357.0
DYD3_k127_3796000_0 ABC-type multidrug transport system ATPase component K21397 - - 0.0 1055.0
DYD3_k127_3796000_1 Rhomboid family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005514 323.0
DYD3_k127_3796000_2 Horizontally Transferred TransMembrane Domain - - - 0.00000000000000000000000000000000000001133 149.0
DYD3_k127_3796000_3 methylamine metabolic process K15977,K16937 - 1.8.5.2 0.00000000000000000000006425 111.0
DYD3_k127_3796000_4 COG0477 Permeases of the major facilitator superfamily - - - 0.00003156 56.0
DYD3_k127_3823897_0 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009408 379.0
DYD3_k127_3823897_1 RibD C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668 308.0
DYD3_k127_3840391_0 Cys/Met metabolism PLP-dependent enzyme K01739,K01758,K01760,K17217 - 2.5.1.48,4.4.1.1,4.4.1.2,4.4.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000359 523.0
DYD3_k127_3840391_1 Sulfatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005093 518.0
DYD3_k127_3840391_2 COG0767 ABC-type transport system involved in resistance to organic solvents, permease component K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000539 309.0
DYD3_k127_3840391_4 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.0000000000000000000000000000000001091 145.0
DYD3_k127_3840391_5 COG2214 DnaJ-class molecular chaperone - - - 0.000000000000005314 79.0
DYD3_k127_3840391_6 succinate dehydrogenase K00241 - - 0.00000007749 61.0
DYD3_k127_3923783_0 Protein of unknown function (DUF1592) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004505 323.0
DYD3_k127_3923783_1 Belongs to the bacterial histone-like protein family - - - 0.0000000000000000000000000000000004858 134.0
DYD3_k127_3923783_2 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.0000000000000000000001162 114.0
DYD3_k127_3923783_3 - - - - 0.0000000000000000003479 102.0
DYD3_k127_3923783_4 Protein of unknown function (DUF1552) - - - 0.0000000613 65.0
DYD3_k127_3931656_0 DEAD/H associated K03724 - - 0.0 1580.0
DYD3_k127_3931656_1 ATPase components of ABC transporters with duplicated ATPase domains K06158 - - 4.807e-246 776.0
DYD3_k127_3931656_10 Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) K01433 - 3.5.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003252 334.0
DYD3_k127_3931656_11 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007911 335.0
DYD3_k127_3931656_12 metallopeptidase activity K01179 - 3.2.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005447 325.0
DYD3_k127_3931656_13 LysM domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004949 321.0
DYD3_k127_3931656_14 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006616 309.0
DYD3_k127_3931656_15 PhoQ Sensor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003531 304.0
DYD3_k127_3931656_16 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins - - - 0.000000000000000000000000000000000000000000000000000000000002395 218.0
DYD3_k127_3931656_17 Cytochrome C assembly protein - - - 0.00000000000000000000000000000000000000000000000000000000002626 214.0
DYD3_k127_3931656_18 cellulose binding - - - 0.0000000000000000000000000000000000000000000000000005325 202.0
DYD3_k127_3931656_19 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000001145 136.0
DYD3_k127_3931656_2 AAA ATPase domain - - - 1.658e-217 737.0
DYD3_k127_3931656_21 - - - - 0.000000000000000000000000000001944 125.0
DYD3_k127_3931656_22 YceI-like domain - - - 0.0000000000000001438 86.0
DYD3_k127_3931656_25 repeat protein - - - 0.000000000001647 81.0
DYD3_k127_3931656_3 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 7.95e-209 660.0
DYD3_k127_3931656_4 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 1.377e-196 620.0
DYD3_k127_3931656_5 DNA ligase K01971 - 6.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003757 552.0
DYD3_k127_3931656_6 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002736 465.0
DYD3_k127_3931656_7 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000218 396.0
DYD3_k127_3931656_8 PAS fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005955 405.0
DYD3_k127_3931656_9 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004271 357.0
DYD3_k127_3943216_0 Isocitrate dehydrogenase K00031 - 1.1.1.42 0.0 1147.0
DYD3_k127_3943216_1 Sulfite reductase K00366,K00381,K00392 - 1.7.7.1,1.8.1.2,1.8.7.1 1.021e-308 963.0
DYD3_k127_3943216_10 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002211 483.0
DYD3_k127_3943216_11 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002772 480.0
DYD3_k127_3943216_12 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002562 480.0
DYD3_k127_3943216_14 succinyl-diaminopimelate desuccinylase K01439 - 3.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002911 463.0
DYD3_k127_3943216_15 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000357 454.0
DYD3_k127_3943216_16 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 435.0
DYD3_k127_3943216_17 Cys/Met metabolism PLP-dependent enzyme K01739 - 2.5.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001883 404.0
DYD3_k127_3943216_18 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 384.0
DYD3_k127_3943216_19 Cytochrome c554 and c-prime - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003755 392.0
DYD3_k127_3943216_2 PhoQ Sensor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 631.0
DYD3_k127_3943216_20 desaturase K00507 - 1.14.19.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002936 362.0
DYD3_k127_3943216_21 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006285 313.0
DYD3_k127_3943216_22 - - - - 0.000000000000000000000000000000000000000000000000000000000000000001734 239.0
DYD3_k127_3943216_23 - - - - 0.000000000000000000000000000000000000000000000000000000000000000004819 246.0
DYD3_k127_3943216_24 4-amino-4-deoxy-L-arabinose transferase activity K05286 - - 0.00000000000000000000000000000000000000000000000000000000000001913 235.0
DYD3_k127_3943216_26 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000000000000000000000000000000000000000000000007227 206.0
DYD3_k127_3943216_27 Domain of unknown function (DUF4202) - - - 0.000000000000000000000000000000000000000000000000003479 189.0
DYD3_k127_3943216_28 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 0.00000000000000000000000000000000000000000000001633 175.0
DYD3_k127_3943216_29 Cytokinin dehydrogenase 1, FAD and cytokinin binding - - - 0.00000000000000000000000000000000000000000000001967 188.0
DYD3_k127_3943216_3 RecQ zinc-binding K03654 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003087 613.0
DYD3_k127_3943216_30 BPTI/Kunitz family of serine protease inhibitors. - - - 0.00000000000000000000000000000000000000003209 165.0
DYD3_k127_3943216_31 histone H2A K63-linked ubiquitination K07003 - - 0.00000000000000000000000000000003081 146.0
DYD3_k127_3943216_32 Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000000171 132.0
DYD3_k127_3943216_34 Putative lipopolysaccharide-modifying enzyme. - - - 0.0000000000000000000001932 110.0
DYD3_k127_3943216_35 - - - - 0.0000000000000000000001949 107.0
DYD3_k127_3943216_37 zinc ion binding - - - 0.00000000000266 76.0
DYD3_k127_3943216_38 Protein of unknown function (DUF2905) - - - 0.00000000001369 66.0
DYD3_k127_3943216_39 Cytochrome c K08685 - 1.4.9.1 0.0000000008365 66.0
DYD3_k127_3943216_4 Sigma-54 interaction domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001707 609.0
DYD3_k127_3943216_40 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.00001338 58.0
DYD3_k127_3943216_5 peptidase M20 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002088 604.0
DYD3_k127_3943216_6 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002057 590.0
DYD3_k127_3943216_7 Aminoacyl-tRNA editing domain K01881 - 6.1.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002007 574.0
DYD3_k127_3943216_8 ABC1 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002104 504.0
DYD3_k127_3943216_9 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00383 - 1.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002389 498.0
DYD3_k127_3947992_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 2103.0
DYD3_k127_3947992_1 FAD linked oxidases, C-terminal domain K00803 - 2.5.1.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004878 567.0
DYD3_k127_3947992_10 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005656 383.0
DYD3_k127_3947992_11 Belongs to the DegT DnrJ EryC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001919 379.0
DYD3_k127_3947992_12 Protein of unknown function (DUF1385) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005139 374.0
DYD3_k127_3947992_13 Mycolic acid cyclopropane synthetase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002395 374.0
DYD3_k127_3947992_14 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002671 349.0
DYD3_k127_3947992_15 3-beta hydroxysteroid dehydrogenase/isomerase family K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002453 356.0
DYD3_k127_3947992_16 glycosyl transferase group 1 K12995 - 2.4.1.348 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001693 324.0
DYD3_k127_3947992_17 LysM domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002571 299.0
DYD3_k127_3947992_18 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004231 287.0
DYD3_k127_3947992_19 ADP-glyceromanno-heptose 6-epimerase activity K01784,K13318,K13322,K16439,K19857 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000002526 275.0
DYD3_k127_3947992_2 Protein of unknown function (DUF1592) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 547.0
DYD3_k127_3947992_20 Protein kinase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004653 267.0
DYD3_k127_3947992_21 Protein of unknown function (DUF354) K09726 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005518 261.0
DYD3_k127_3947992_22 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000252 260.0
DYD3_k127_3947992_23 Protein kinase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004121 272.0
DYD3_k127_3947992_24 3-beta hydroxysteroid dehydrogenase/isomerase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000002207 244.0
DYD3_k127_3947992_25 Polysaccharide biosynthesis protein K13318,K13322,K16439,K19857 - - 0.00000000000000000000000000000000000000000000000000000000000000000003515 257.0
DYD3_k127_3947992_26 palmitoyl-(protein) hydrolase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000002377 239.0
DYD3_k127_3947992_27 SurA N-terminal domain K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000002061 226.0
DYD3_k127_3947992_28 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000009584 217.0
DYD3_k127_3947992_29 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.0000000000000000000000000000000000000000000000000003586 189.0
DYD3_k127_3947992_3 methyltransferase activity K00569,K16437,K21336 - 2.1.1.67 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007436 495.0
DYD3_k127_3947992_30 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.00000000000000000000000000000000000000000000000002359 186.0
DYD3_k127_3947992_31 Belongs to the sulfur carrier protein TusA family - - - 0.0000000000000000000000000000000000000000000000001229 184.0
DYD3_k127_3947992_32 integral membrane protein - - - 0.00000000000000000000000000000000000000000000002309 186.0
DYD3_k127_3947992_33 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000001894 181.0
DYD3_k127_3947992_34 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.00000000000000000000000000000000000000000003007 167.0
DYD3_k127_3947992_35 FHA domain - - - 0.000000000000000000000000000000000000000006484 171.0
DYD3_k127_3947992_36 Zinc-dependent metalloprotease - - - 0.0000000000000000000000000000000000001449 153.0
DYD3_k127_3947992_37 PIN domain - - - 0.00000000000000000000000000000961 123.0
DYD3_k127_3947992_38 M6 family metalloprotease domain protein - - - 0.0000000000000000000000000001241 132.0
DYD3_k127_3947992_39 Binds the 23S rRNA K02909 - - 0.0000000000000000000000000008381 113.0
DYD3_k127_3947992_4 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 475.0
DYD3_k127_3947992_40 Acetyltransferase K19429 - - 0.0000000000000000000000001518 115.0
DYD3_k127_3947992_42 - - - - 0.00000000000000000000002339 114.0
DYD3_k127_3947992_43 Redoxin - - - 0.0000000000000000000002375 103.0
DYD3_k127_3947992_44 - - - - 0.0000000000000000000003926 112.0
DYD3_k127_3947992_45 Methyltransferase domain - - - 0.000000000000000000001387 104.0
DYD3_k127_3947992_46 Periplasmic binding protein K01999 - - 0.000000000000000000002961 109.0
DYD3_k127_3947992_48 lysyltransferase activity K07027 - - 0.00000000000000001461 94.0
DYD3_k127_3947992_49 - - - - 0.000000000000005197 88.0
DYD3_k127_3947992_5 Protein of unknown function (DUF1552) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004823 477.0
DYD3_k127_3947992_50 iron ion homeostasis - - - 0.000000000001855 79.0
DYD3_k127_3947992_52 serine-type endopeptidase activity - - - 0.0000000001426 74.0
DYD3_k127_3947992_53 Sulfurtransferase TusA K04085 - - 0.000000001318 69.0
DYD3_k127_3947992_54 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.00000001419 68.0
DYD3_k127_3947992_55 Membrane - - - 0.0000000149 67.0
DYD3_k127_3947992_57 DsrE/DsrF-like family - - - 0.0000005113 57.0
DYD3_k127_3947992_58 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.00001738 57.0
DYD3_k127_3947992_59 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00002685 57.0
DYD3_k127_3947992_6 Male sterility protein K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008608 448.0
DYD3_k127_3947992_60 oxidoreductase activity K07114 - - 0.00002784 55.0
DYD3_k127_3947992_61 - - - - 0.0001283 47.0
DYD3_k127_3947992_7 Aerotolerance regulator N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003674 422.0
DYD3_k127_3947992_8 PFAM sigma-54 factor interaction domain-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002 400.0
DYD3_k127_3947992_9 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006845 389.0
DYD3_k127_3972578_0 protein involved in exopolysaccharide biosynthesis K16554 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008813 624.0
DYD3_k127_3972578_1 MBOAT, membrane-bound O-acyltransferase family K19294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007499 371.0
DYD3_k127_3972578_2 Glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004356 335.0
DYD3_k127_3972578_3 3-demethylubiquinone-9 3-O-methyltransferase activity K00568,K15257 - 2.1.1.222,2.1.1.64 0.00000000000000000000000000000000000000000000000000000004262 219.0
DYD3_k127_3972578_4 Glycosyl transferase 4-like domain - - - 0.0000000000000000000000000000000000000000000000003011 190.0
DYD3_k127_3972578_5 O-Antigen ligase - - - 0.0000000000000000000000000000000000000000003086 175.0
DYD3_k127_3972578_6 transferase activity, transferring glycosyl groups - - - 0.0000000000009453 80.0
DYD3_k127_3981686_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 1.788e-223 699.0
DYD3_k127_3981686_1 Peptidase family M50 K11749 - - 2.961e-196 650.0
DYD3_k127_3981686_10 Thioesterase-like superfamily K07107 - - 0.00000000000000000000000000000000000000000000929 166.0
DYD3_k127_3981686_11 PFAM thioesterase superfamily protein - - - 0.000000000000000000000000000000000000001586 168.0
DYD3_k127_3981686_12 xylan catabolic process K03932 - - 0.0000000000000000000000000000000006507 148.0
DYD3_k127_3981686_13 flavin-nucleotide-binding protein structurally related to pyridoxine 5-phosphate oxidase K01768 - 4.6.1.1 0.00000000000000000000009594 99.0
DYD3_k127_3981686_14 COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily - - - 0.000000000000000006879 91.0
DYD3_k127_3981686_15 COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily - - - 0.0000000004683 62.0
DYD3_k127_3981686_16 COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily - - - 0.0000005681 59.0
DYD3_k127_3981686_17 flavin-nucleotide-binding protein structurally related to pyridoxine 5-phosphate oxidase K01768 - 4.6.1.1 0.000001693 57.0
DYD3_k127_3981686_2 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008738 321.0
DYD3_k127_3981686_3 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003877 306.0
DYD3_k127_3981686_4 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001732 312.0
DYD3_k127_3981686_5 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005043 295.0
DYD3_k127_3981686_6 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576 1.17.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 294.0
DYD3_k127_3981686_7 PLD-like domain - - - 0.000000000000000000000000000000000000000000000000000000000009536 233.0
DYD3_k127_3981686_8 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000001527 198.0
DYD3_k127_3981686_9 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K03438,K13292 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0008961,GO:0009249,GO:0009987,GO:0010467,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0031224,GO:0031226,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0051604,GO:0071704,GO:0071944,GO:0140096,GO:1901564 2.1.1.199 0.000000000000000000000000000000000000000000000004915 187.0
DYD3_k127_4025742_0 Domain of unknown function (DUF1998) K06877 - - 2.098e-319 997.0
DYD3_k127_4025742_1 IgGFc binding protein - - - 2.505e-212 679.0
DYD3_k127_4025742_2 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 563.0
DYD3_k127_4025742_4 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003501 421.0
DYD3_k127_4025742_5 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003062 387.0
DYD3_k127_4025742_6 RNase_H superfamily K07502 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004146 371.0
DYD3_k127_4025742_7 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.0000000000000000000000000000000000000000000000000000000000000003223 227.0
DYD3_k127_4025742_8 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.0000000000000000000000000000000000000000008278 169.0
DYD3_k127_4025742_9 PQQ enzyme repeat - - - 0.00000001005 68.0
DYD3_k127_4033950_0 Family membership K08884 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004563 294.0
DYD3_k127_4033950_1 PFAM Formylglycine-generating sulfatase enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005405 262.0
DYD3_k127_4033950_10 Cysteine-rich CPXCG - - - 0.000000000008344 67.0
DYD3_k127_4033950_2 Peptidase C14 caspase catalytic subunit p20 - - - 0.00000000000000000000000000000000000000000000000000001035 210.0
DYD3_k127_4033950_3 Putative restriction endonuclease - - - 0.0000000000000000000000000000000000000000000003399 182.0
DYD3_k127_4033950_4 ribonuclease activity - - - 0.00000000000000000000000000000000000002781 153.0
DYD3_k127_4033950_5 - - - - 0.0000000000000000000000000000000003599 143.0
DYD3_k127_4033950_6 Cysteine-rich secretory protein family - - - 0.000000000000000000000000000003341 137.0
DYD3_k127_4033950_7 glyoxalase - - - 0.0000000000000000000000000003573 118.0
DYD3_k127_4033950_8 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000005951 112.0
DYD3_k127_4033950_9 positive regulation of growth - - - 0.000000000000000000000004936 102.0
DYD3_k127_4036722_0 ABC-type uncharacterized transport system - - - 7.923e-203 649.0
DYD3_k127_4036722_1 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002283 606.0
DYD3_k127_4036722_11 transcriptional regulator K09017 - - 0.00000003499 65.0
DYD3_k127_4036722_12 flagellar K02418 - - 0.0004145 53.0
DYD3_k127_4036722_2 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 499.0
DYD3_k127_4036722_3 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007053 494.0
DYD3_k127_4036722_4 Beta-xylanase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 481.0
DYD3_k127_4036722_5 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005384 308.0
DYD3_k127_4036722_6 Domain of unknown function (DUF4340) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007023 272.0
DYD3_k127_4036722_7 protein conserved in cyanobacteria - - - 0.0000000000000000000000000000000000000000000000000002672 198.0
DYD3_k127_4036722_8 Type III secretion K03226 - - 0.0000000000000000000000000000000000000000000000004133 186.0
DYD3_k127_4036722_9 PFAM ABC-2 type transporter K01992 - - 0.0000000000000000000000000000003459 126.0
DYD3_k127_4042591_0 Transport permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 315.0
DYD3_k127_4042591_1 ATPases associated with a variety of cellular activities K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003079 313.0
DYD3_k127_4042591_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K01993 - - 0.00000000000000000006643 104.0
DYD3_k127_4042591_3 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 0.0000000000007348 79.0
DYD3_k127_4042591_4 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.000005756 52.0
DYD3_k127_4047098_0 Receptor K02014 - - 8.639e-295 925.0
DYD3_k127_4047098_1 Reductase C-terminal K05297 - 1.18.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005008 546.0
DYD3_k127_4047098_10 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000002404 164.0
DYD3_k127_4047098_11 Domain of unknown function (DUF4154) - - - 0.00000000000000000000000000000000000000000241 163.0
DYD3_k127_4047098_12 cheY-homologous receiver domain K03413 - - 0.0000000000000000000000000000006647 125.0
DYD3_k127_4047098_13 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester - - - 0.000000000000000000000000001519 121.0
DYD3_k127_4047098_14 Ribosomal protein L11 methyltransferase K02687 - - 0.00000000000000000000000352 110.0
DYD3_k127_4047098_16 - - - - 0.0000000000001606 81.0
DYD3_k127_4047098_17 Chemotaxis phosphatase CheX K03409 - - 0.00003945 54.0
DYD3_k127_4047098_2 Alpha-tubulin suppressor and related RCC1 domain-containing - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 470.0
DYD3_k127_4047098_3 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002011 462.0
DYD3_k127_4047098_4 Acetyl xylan esterase (AXE1) K01060 - 3.1.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004557 454.0
DYD3_k127_4047098_5 Sulfatase K01133 - 3.1.6.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002732 362.0
DYD3_k127_4047098_6 Nitrate and nitrite sensing K03407 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000329 299.0
DYD3_k127_4047098_7 Protein of unknown function (DUF3095) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008893 280.0
DYD3_k127_4047098_8 membrane-bound metal-dependent K01993,K07038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002728 283.0
DYD3_k127_4047098_9 xylan catabolic process K01181 GO:0005575,GO:0005576 3.2.1.8 0.00000000000000000000000000000000000000000003894 177.0
DYD3_k127_4067317_0 Protein of unknown function (DUF1552) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003428 481.0
DYD3_k127_4067317_1 Protein of unknown function (DUF1587) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 420.0
DYD3_k127_4067317_10 Serine threonine-protein kinase-like protein - - - 0.000000000000000000000001965 117.0
DYD3_k127_4067317_13 - - - - 0.000000000000000000008209 108.0
DYD3_k127_4067317_15 transferase activity, transferring glycosyl groups K12996 - - 0.000000000001997 78.0
DYD3_k127_4067317_16 N-acetylmuramoyl-L-alanine amidase - - - 0.0000000001158 73.0
DYD3_k127_4067317_17 SMART Hedgehog intein hint domain protein - - - 0.00000001333 67.0
DYD3_k127_4067317_18 Putative transposase - - - 0.00005604 53.0
DYD3_k127_4067317_19 guanyl-nucleotide exchange factor activity - - - 0.0002384 53.0
DYD3_k127_4067317_2 Right handed beta helix region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002143 410.0
DYD3_k127_4067317_3 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003289 270.0
DYD3_k127_4067317_4 Cro/C1-type HTH DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000004976 240.0
DYD3_k127_4067317_5 Chaperone of endosialidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000852 252.0
DYD3_k127_4067317_6 Sulfatase-modifying factor enzyme 1 - - - 0.00000000000000000000000000000000000000000000000000009552 201.0
DYD3_k127_4067317_7 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K00375,K05825,K16422,K16423 - 1.1.3.46,2.6.1.103 0.0000000000000000000000000000000000000000000000000001007 205.0
DYD3_k127_4067317_8 Protein of unknown function (DUF1587) - - - 0.000000000000000000000000000000000000000008117 168.0
DYD3_k127_4067317_9 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.000000000000000000000000000000000000111 151.0
DYD3_k127_4086032_0 Non-ribosomal peptide synthetase modules and related proteins - - - 0.0 1407.0
DYD3_k127_4086032_1 polyketide synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 441.0
DYD3_k127_4086032_2 X-Pro dipeptidyl-peptidase (S15 family) K06889 - - 0.00000000000000000000000000000000000000000000000000005735 197.0
DYD3_k127_410490_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 1292.0
DYD3_k127_410490_1 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 2.148e-301 938.0
DYD3_k127_410490_10 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000003736 221.0
DYD3_k127_410490_11 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000002736 219.0
DYD3_k127_410490_12 Protein of unknown function (DUF1232) - - - 0.0000000000000000000000000000000000000000000000000009718 189.0
DYD3_k127_410490_13 Rieske [2Fe-2S] domain - - - 0.0000000000000000000000000002869 126.0
DYD3_k127_410490_15 WYL domain - - - 0.00000000000000000002316 93.0
DYD3_k127_410490_2 serine threonine protein kinase K08884,K12132 - 2.7.11.1 7.44e-238 748.0
DYD3_k127_410490_3 Aminotransferase K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007952 452.0
DYD3_k127_410490_4 The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis K00756,K00758 - 2.4.2.2,2.4.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002566 452.0
DYD3_k127_410490_5 Transglycosylase SLT domain K08306,K08309 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003126 376.0
DYD3_k127_410490_6 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002945 313.0
DYD3_k127_410490_7 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000001372 245.0
DYD3_k127_410490_8 PFAM peptidase M19 renal dipeptidase K01273 - 3.4.13.19 0.00000000000000000000000000000000000000000000000000000000000000001721 237.0
DYD3_k127_410490_9 Alkyl hydroperoxide reductase and or thiol-specific antioxidant family (AhpC TSA) protein - - - 0.0000000000000000000000000000000000000000000000000000000000000007461 232.0
DYD3_k127_4111858_0 AAA ATPase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141 616.0
DYD3_k127_4111858_1 TonB-dependent Receptor Plug Domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 495.0
DYD3_k127_4111858_10 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes - - - 0.0000000000000000000000000000000000000000002785 180.0
DYD3_k127_4111858_11 - - - - 0.00000000000000000000000002417 126.0
DYD3_k127_4111858_12 Stigma-specific protein, Stig1 - - - 0.0000000000000000000000006953 121.0
DYD3_k127_4111858_13 Carotenoid biosynthesis protein K22502 - 5.5.1.19 0.00000000007115 76.0
DYD3_k127_4111858_14 - - - - 0.000000006999 68.0
DYD3_k127_4111858_15 hydrolase family 5 K01218 - 3.2.1.78 0.000008129 59.0
DYD3_k127_4111858_2 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005676 402.0
DYD3_k127_4111858_3 phosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001949 320.0
DYD3_k127_4111858_4 Family membership K08884 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000536 278.0
DYD3_k127_4111858_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005806 259.0
DYD3_k127_4111858_6 FAD linked oxidase domain protein K16653 - 1.1.98.3 0.000000000000000000000000000000000000000000000000000000000000000000003821 263.0
DYD3_k127_4111858_7 Belongs to the glycosyl hydrolase 5 (cellulase A) family K01218 - 3.2.1.78 0.000000000000000000000000000000000000000000000000000000000000000007149 251.0
DYD3_k127_4111858_8 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000001215 226.0
DYD3_k127_4111858_9 Protein of unknown function (DUF2938) - - - 0.00000000000000000000000000000000000000000000000000000007557 201.0
DYD3_k127_4116887_0 archaeal or bacterial-type flagellum-dependent cell motility K02556 GO:0006935,GO:0008150,GO:0009605,GO:0040011,GO:0042221,GO:0042330,GO:0044403,GO:0044419,GO:0050896,GO:0051701,GO:0051704,GO:0052116,GO:0052126,GO:0052127,GO:0052143,GO:0052192,GO:0052195,GO:0052216,GO:0052243 - 0.000000000000000000000000000000000000000000000000000000000000000000000001144 256.0
DYD3_k127_4116887_2 Flagellar Motor Protein K02557 - - 0.0000000000000000000000000000000000000000000000009827 188.0
DYD3_k127_4116887_3 Flagellar basal body rod FlgEFG protein C-terminal K02391,K02392 - - 0.0000000000000000000000000000004856 137.0
DYD3_k127_4116887_4 cheY-homologous receiver domain - - - 0.0000000000000000182 87.0
DYD3_k127_4116887_5 Diguanylate cyclase (GGDEF) domain protein - - - 0.000000009257 66.0
DYD3_k127_4116887_6 Flagellar rod assembly protein muramidase FlgJ K02395 - - 0.000005274 58.0
DYD3_k127_41408_0 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003299 370.0
DYD3_k127_41408_1 - - - - 0.00000000000000000000000000000000000000000000000000006196 187.0
DYD3_k127_41408_2 - - - - 0.0000000000000000000000000000000000000000000003301 170.0
DYD3_k127_41408_3 DeoC/LacD family aldolase K11645 - 4.1.2.13 0.0000000000000000000000000003436 113.0
DYD3_k127_41408_5 Lysyl oxidase - - - 0.0000000002154 69.0
DYD3_k127_41408_6 - - - - 0.00004754 45.0
DYD3_k127_41408_7 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses K20276 - - 0.00005092 55.0
DYD3_k127_4171835_0 Histidine kinase K07716 - 2.7.13.3 1.576e-237 751.0
DYD3_k127_4171835_1 Belongs to the enoyl-CoA hydratase isomerase family K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 1.351e-234 765.0
DYD3_k127_4171835_10 - - - - 0.000000000000000000000000000000000000000000000000007648 194.0
DYD3_k127_4171835_11 - - - - 0.0000000000000000000000000000000000000000000007454 173.0
DYD3_k127_4171835_12 Sigma-70, region 4 - - - 0.000000000000000000000000000000000000001237 154.0
DYD3_k127_4171835_14 - - - - 0.000001126 57.0
DYD3_k127_4171835_2 Belongs to the thiolase family K00626,K00632 - 2.3.1.16,2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001544 540.0
DYD3_k127_4171835_3 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004482 454.0
DYD3_k127_4171835_4 Serine Threonine protein kinase K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008987 383.0
DYD3_k127_4171835_5 Zinc-binding dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003088 306.0
DYD3_k127_4171835_6 xylan catabolic process K03932 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006862 276.0
DYD3_k127_4171835_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000003383 246.0
DYD3_k127_4171835_8 - - - - 0.00000000000000000000000000000000000000000000000000000000001007 234.0
DYD3_k127_4171835_9 metallopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000001354 207.0
DYD3_k127_4191395_0 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003814 535.0
DYD3_k127_4191395_1 Haem-binding uptake, Tiki superfamily, ChaN - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002643 321.0
DYD3_k127_4191395_2 4-amino-4-deoxy-L-arabinose transferase activity K02277 - 1.9.3.1 0.00000000000000000000000006625 113.0
DYD3_k127_4191395_3 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.00000000000000002086 91.0
DYD3_k127_4191395_4 long-chain fatty acid transport protein - - - 0.0003825 53.0
DYD3_k127_4199649_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.0 1028.0
DYD3_k127_4199649_1 HB1, ASXL, restriction endonuclease HTH domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004752 412.0
DYD3_k127_4199649_10 HEAT repeats - - - 0.00000000005098 73.0
DYD3_k127_4199649_11 protein conserved in bacteria K09930 - - 0.0001834 50.0
DYD3_k127_4199649_2 Belongs to the ompA family K20276 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001454 396.0
DYD3_k127_4199649_3 Cell wall formation K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005341 340.0
DYD3_k127_4199649_4 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006331 282.0
DYD3_k127_4199649_6 Belongs to the arginase family K01480 - 3.5.3.11 0.0000000000000000000000000000000000000000000004188 180.0
DYD3_k127_4199649_7 PFAM ribonuclease H K03469,K06864 - 3.1.26.4 0.00000000000000000000000000000000000000001197 157.0
DYD3_k127_4199649_8 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000004426 161.0
DYD3_k127_4199649_9 Thioredoxin-like - - - 0.00000000000000000000000000000003092 142.0
DYD3_k127_4203668_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000652 598.0
DYD3_k127_4203668_1 Tryptophanyl-tRNA synthetase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003073 377.0
DYD3_k127_4203668_2 Flagellar Motor Protein K02557 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001691 304.0
DYD3_k127_4203668_3 Transcriptional regulator, CarD family K07736 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004965 293.0
DYD3_k127_4203668_4 Ppx GppA K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002605 297.0
DYD3_k127_4203668_5 HNH endonuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003566 263.0
DYD3_k127_4203668_6 Belongs to the N(4) N(6)-methyltransferase family K00571 - 2.1.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000001332 263.0
DYD3_k127_4203668_8 energy transducer activity K03832 - - 0.00000008931 60.0
DYD3_k127_4223790_0 Serine Threonine protein kinase K12132 - 2.7.11.1 0.0 1462.0
DYD3_k127_4223790_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005602 432.0
DYD3_k127_4223790_10 Domain of unknown function (DUF4112) - - - 0.00000000000000000000006114 105.0
DYD3_k127_4223790_11 Membrane protein involved in aromatic hydrocarbon degradation K06076 - - 0.0000000000003982 82.0
DYD3_k127_4223790_2 Semialdehyde dehydrogenase, NAD binding domain K00133 - 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003781 413.0
DYD3_k127_4223790_5 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant K03465 - 2.1.1.148 0.000000000000000000000000000000000000000000000000000000000000000000000000000000538 277.0
DYD3_k127_4223790_6 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000001311 272.0
DYD3_k127_4223790_7 Protein of unknown function (DUF1223) - - - 0.0000000000000000000000000000000000000000000756 170.0
DYD3_k127_4223790_8 PilZ domain K02676 - - 0.0000000000000000000000000000000000000000006797 163.0
DYD3_k127_4223790_9 Domain of unknown function (DUF1993) K09983 - - 0.0000000000000000000000000000000000158 141.0
DYD3_k127_4226219_0 CoA-substrate-specific enzyme activase - - - 0.0 1751.0
DYD3_k127_4226219_1 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K02481,K07714 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003428 393.0
DYD3_k127_4226219_2 Histidine kinase K02668,K07708 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000003303 209.0
DYD3_k127_4226219_3 4 iron, 4 sulfur cluster binding - - - 0.00000000000000000000000000000000000000000003524 165.0
DYD3_k127_4226219_4 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000017 156.0
DYD3_k127_4226219_5 E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate K00164 - 1.2.4.2 0.00005403 47.0
DYD3_k127_4233823_0 B-1 B cell differentiation K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000001895 276.0
DYD3_k127_4233823_1 Belongs to the glycosyl hydrolase 28 family - - - 0.0000000000000000000000000000000000000000000000000000000000000001258 250.0
DYD3_k127_4233823_10 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000001049 72.0
DYD3_k127_4233823_3 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.0000000000000000000000000000000000000000000000000000000004673 220.0
DYD3_k127_4233823_4 FG-GAP repeat - - - 0.00000000000000000000000000000000000000000000000000000004523 224.0
DYD3_k127_4233823_5 dipeptide transport - - - 0.00000000000000000000000000000000000000000004892 169.0
DYD3_k127_4233823_6 SIR2-like domain - - - 0.00000000000000000000000000002184 134.0
DYD3_k127_4233823_7 PhoD-like phosphatase K01113 - 3.1.3.1 0.00000000000000000000000002974 127.0
DYD3_k127_4233823_8 DNA-templated transcription, initiation K03088 - - 0.000000000000000000773 96.0
DYD3_k127_4233823_9 deazaflavin-dependent nitroreductase family protein - - - 0.0000000000001691 82.0
DYD3_k127_4244789_0 - - - - 0.000000000000003402 84.0
DYD3_k127_4244789_1 Glycoside hydrolase family 44 - - - 0.000000000001587 71.0
DYD3_k127_4244789_2 PFAM ATP-binding region ATPase domain protein - - - 0.000000000008271 77.0
DYD3_k127_4244789_4 Chain length determinant protein K16554 - - 0.0003087 53.0
DYD3_k127_4271097_0 PrkA serine protein kinase C-terminal domain - - - 1.1e-283 891.0
DYD3_k127_4271097_1 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 2.595e-199 634.0
DYD3_k127_4271097_10 Small GTP-binding protein K06883 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001572 295.0
DYD3_k127_4271097_11 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003429 280.0
DYD3_k127_4271097_12 Belongs to the pseudomonas-type ThrB family K02204 - 2.7.1.39 0.000000000000000000000000000000000000000000000000000000000000000000987 240.0
DYD3_k127_4271097_13 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.00000000000000000000000000000000000000000000000000000000001033 221.0
DYD3_k127_4271097_16 CAAX protease self-immunity K07052,K09696 - - 0.0000000000198 76.0
DYD3_k127_4271097_2 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001567 449.0
DYD3_k127_4271097_3 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003557 422.0
DYD3_k127_4271097_4 Argininosuccinate lyase C-terminal K01755 - 4.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003173 415.0
DYD3_k127_4271097_5 Electron transfer flavoprotein K03521 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004204 390.0
DYD3_k127_4271097_6 Electron transfer flavoprotein domain K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 382.0
DYD3_k127_4271097_7 Cro/C1-type HTH DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009786 328.0
DYD3_k127_4271097_8 TatD family K03424 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003659 309.0
DYD3_k127_4271097_9 Patatin-like phospholipase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 314.0
DYD3_k127_4294349_0 response regulator K07714 - - 1.113e-230 720.0
DYD3_k127_4294349_1 Protein of unknown function (DUF1343) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002386 405.0
DYD3_k127_4294349_2 Type II secretion system (T2SS), protein E, N-terminal domain - - - 0.000000000000000000000000000000000000000005071 158.0
DYD3_k127_4294349_3 Putative restriction endonuclease - - - 0.0000001059 57.0
DYD3_k127_4294349_4 Putative restriction endonuclease - - - 0.0001603 46.0
DYD3_k127_4309198_0 PFAM MMPL family K07003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 575.0
DYD3_k127_4309198_1 Domain of unknown function (DUF4139) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000088 542.0
DYD3_k127_4309198_10 - - - - 0.0000001172 59.0
DYD3_k127_4309198_11 - - - - 0.0003809 48.0
DYD3_k127_4309198_2 arylsulfatase activity K07014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004157 387.0
DYD3_k127_4309198_3 Protein of unknown function (DUF1592) - - - 0.00000000000000000000000000000000000000000000000000000000000000000001951 256.0
DYD3_k127_4309198_4 oxidoreductase activity, acting on CH-OH group of donors - - - 0.0000000000000000000000000000000000000000000000000000000000000000001219 242.0
DYD3_k127_4309198_6 alpha-L-arabinofuranosidase K01209 - 3.2.1.55 0.0000000000000000000000000000000000000000000000000000000000000926 234.0
DYD3_k127_4309198_7 - - - - 0.0000000000000000000000000000000000000000000000001794 181.0
DYD3_k127_4309198_8 Belongs to the peptidase S1B family K01318 - 3.4.21.19 0.000000000000000000000000000000000000000005194 172.0
DYD3_k127_4309198_9 - - - - 0.000000000000000000000000000000009528 138.0
DYD3_k127_4333393_0 IstB-like ATP binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000001387 230.0
DYD3_k127_4333393_2 PFAM Integrase catalytic region - - - 0.00000000000002083 78.0
DYD3_k127_4333393_3 - - - - 0.000000004609 59.0
DYD3_k127_4333393_4 - - - - 0.000000009166 67.0
DYD3_k127_4333393_5 Thioesterase-like superfamily K07107 - - 0.0001834 50.0
DYD3_k127_4375633_0 PFAM glutamine synthetase catalytic region K01915 - 6.3.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 569.0
DYD3_k127_4375633_1 phosphatidate phosphatase activity K19302 - 3.6.1.27 0.00000000000000000000000000000007577 134.0
DYD3_k127_4375633_2 Low-density lipoprotein receptor domain class A K20049 - - 0.000000000000000000000000000235 129.0
DYD3_k127_4375633_3 Iron-containing alcohol dehydrogenase K00048 - 1.1.1.77 0.00001857 47.0
DYD3_k127_4439829_0 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 - 1.11.1.21 0.0 1245.0
DYD3_k127_4439829_1 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001451 359.0
DYD3_k127_4439829_2 B12 binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 323.0
DYD3_k127_4439829_3 oxidoreductase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004054 269.0
DYD3_k127_4439829_4 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 0.00000000000000000000000000000000000000000000000000000000002232 211.0
DYD3_k127_4448660_0 DUF3160 - - - 1.14e-215 697.0
DYD3_k127_4448660_1 NADP Oxidoreductase K06988 - 1.5.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002943 336.0
DYD3_k127_4448660_2 lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 337.0
DYD3_k127_4448660_3 Pectinesterase K01051 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 3.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000001637 282.0
DYD3_k127_4448660_4 PFAM Ion transport protein K10716 - - 0.00000000000000000000000000000000000000000000000000000000000000002178 234.0
DYD3_k127_4448660_5 SnoaL-like domain - - - 0.0000000000000000000000000000000002056 147.0
DYD3_k127_4448660_6 Protein conserved in bacteria - - - 0.00000000000005657 79.0
DYD3_k127_4448660_7 amine dehydrogenase activity K01113 - 3.1.3.1 0.0000006193 63.0
DYD3_k127_4494061_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 2.784e-205 653.0
DYD3_k127_4494061_1 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K02768,K08483,K11183 - 2.7.1.202,2.7.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004729 538.0
DYD3_k127_4494061_2 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006914 368.0
DYD3_k127_4494061_3 Displays ATPase and GTPase activities K06958 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008804 323.0
DYD3_k127_4494061_5 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02806 - - 0.0000000000000000000000000000000000008323 145.0
DYD3_k127_4494061_6 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000001159 128.0
DYD3_k127_4494061_7 Phosphocarrier protein HPR K11189 - - 0.0000000000000000000000003258 108.0
DYD3_k127_4494061_8 Sigma 54 modulation protein / S30EA ribosomal protein K05808 - - 0.0000000000000000000001023 109.0
DYD3_k127_4494061_9 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004654,GO:0005488,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 0.0000000000000001299 83.0
DYD3_k127_4498212_0 Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate K00451 - 1.13.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004899 520.0
DYD3_k127_4498212_1 PFAM MscS Mechanosensitive ion channel K16052 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 421.0
DYD3_k127_4498212_2 beta-keto acid cleavage enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 398.0
DYD3_k127_4498212_3 Belongs to the class-II aminoacyl-tRNA synthetase family K01880 GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006426,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046983,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002392 301.0
DYD3_k127_4498212_4 Histidine kinase K15011 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000543 300.0
DYD3_k127_4498212_5 Bacterial regulatory protein, Fis family K15012 - - 0.000000000000000000000000000000000000000000000000000000002131 222.0
DYD3_k127_4498212_6 PFAM Glutathione-dependent formaldehyde-activating enzyme - - - 0.00000000000000000000000000000000000000000000001788 176.0
DYD3_k127_4504257_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003453 364.0
DYD3_k127_4504257_1 Histone deacetylase domain K04768 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006665 347.0
DYD3_k127_4504257_2 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005459 308.0
DYD3_k127_4504257_5 lyase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000002271 228.0
DYD3_k127_4534872_0 belongs to the CobB CobQ family K13788 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006083,GO:0006084,GO:0006085,GO:0006091,GO:0006113,GO:0006139,GO:0006163,GO:0006164,GO:0006520,GO:0006566,GO:0006567,GO:0006629,GO:0006631,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008959,GO:0009056,GO:0009058,GO:0009063,GO:0009066,GO:0009068,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015980,GO:0016053,GO:0016054,GO:0016407,GO:0016740,GO:0016746,GO:0016747,GO:0016999,GO:0017000,GO:0017001,GO:0017144,GO:0018130,GO:0019413,GO:0019427,GO:0019438,GO:0019541,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0042737,GO:0043167,GO:0043169,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044255,GO:0044271,GO:0044272,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045733,GO:0046390,GO:0046394,GO:0046395,GO:0046459,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0070689,GO:0071616,GO:0071704,GO:0072329,GO:0072330,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606 2.3.1.8 9.18e-227 736.0
DYD3_k127_4534872_1 arylsulfatase activity K07014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007267 588.0
DYD3_k127_4534872_10 WHG domain - - - 0.0000000000000000000000002034 121.0
DYD3_k127_4534872_11 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.000000000000000000000002723 114.0
DYD3_k127_4534872_12 metal cluster binding - - - 0.00000000000000000000001214 112.0
DYD3_k127_4534872_2 Protein of unknown function (DUF1587) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201 578.0
DYD3_k127_4534872_3 Divalent cation transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 487.0
DYD3_k127_4534872_4 Acetokinase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 483.0
DYD3_k127_4534872_5 Protein of unknown function (DUF1552) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 476.0
DYD3_k127_4534872_6 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 402.0
DYD3_k127_4534872_7 Belongs to the peptidase S16 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001705 406.0
DYD3_k127_4534872_8 mechanosensitive ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004609 312.0
DYD3_k127_4534872_9 Domain of unknown function (DUF4188) - - - 0.000000000000000000000000000000000000000000000000003018 186.0
DYD3_k127_4571233_0 PFAM asparagine synthase K06864 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002551 357.0
DYD3_k127_4571233_1 nucleotidyltransferase DNA polymerase involved in DNA repair K14161 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004556 347.0
DYD3_k127_4571233_2 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K02337,K14162 GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006873 327.0
DYD3_k127_4571233_3 Cellulase (glycosyl hydrolase family 5) K01179 - 3.2.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002286 313.0
DYD3_k127_4571233_4 HAD-hyrolase-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006757 273.0
DYD3_k127_4571233_5 CBD_II K01728 - 4.2.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000007321 262.0
DYD3_k127_4571233_6 recA bacterial DNA recombination protein - - - 0.0000000000000000000000000000000000000000000004005 176.0
DYD3_k127_4571233_7 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.000000000000000000000000000000000000000001952 167.0
DYD3_k127_4571233_8 Protein of unknown function (DUF1232) - - - 0.0000000000000000000000000000000000002265 159.0
DYD3_k127_4571233_9 TIGRFAM YihY family protein (not ribonuclease BN) K07058 - - 0.000000000001838 78.0
DYD3_k127_4571942_0 Beta-eliminating lyase K00639 - 2.3.1.29 5.436e-215 679.0
DYD3_k127_4571942_1 COG1233 Phytoene dehydrogenase and related - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004024 493.0
DYD3_k127_4571942_10 this gene contains a nucleotide ambiguity which may be the result of a sequencing error - - - 0.000000000000000003756 100.0
DYD3_k127_4571942_2 Belongs to the PstS family K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009628 366.0
DYD3_k127_4571942_3 FAD dependent oxidoreductase K03153 - 1.4.3.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006501 285.0
DYD3_k127_4571942_4 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000003387 272.0
DYD3_k127_4571942_5 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000001541 246.0
DYD3_k127_4571942_6 Conserved hypothetical protein 95 K08316 - 2.1.1.171 0.0000000000000000000000000000000000000000000001181 174.0
DYD3_k127_4571942_7 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000003165 116.0
DYD3_k127_4571942_8 acetyltransferase - - - 0.00000000000000000002884 92.0
DYD3_k127_4576259_0 Type II restriction enzyme, methylase subunits - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004983 444.0
DYD3_k127_4576259_1 Protein of unknown function (DUF1587) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 391.0
DYD3_k127_4576259_2 Protein of unknown function (DUF1552) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 310.0
DYD3_k127_4576259_3 LysM domain protein K07261 - - 0.0000000000000000000000000000000000000000000000000001163 197.0
DYD3_k127_4576259_4 Poly(3-hydroxybutyrate) depolymerase - - - 0.00000000000000000000000000000000000000000003872 177.0
DYD3_k127_4577447_0 Multicopper K04753 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001313 489.0
DYD3_k127_4577447_1 Transglycosylase SLT domain K08309 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 449.0
DYD3_k127_4577447_11 Protein of unknown function (DUF2933) - - - 0.0000000000007203 71.0
DYD3_k127_4577447_12 chitin binding K01183 - 3.2.1.14 0.000000000001632 77.0
DYD3_k127_4577447_13 COG0644 Dehydrogenases (flavoproteins) - - - 0.000000001175 63.0
DYD3_k127_4577447_2 Phytanoyl-CoA dioxygenase (PhyH) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002615 426.0
DYD3_k127_4577447_3 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 345.0
DYD3_k127_4577447_5 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001303 305.0
DYD3_k127_4577447_6 iron ion homeostasis - - - 0.0000000000000000000000000000000000000000000000000000000000000000009732 246.0
DYD3_k127_4577447_7 Glycosyl hydrolase family 57 - - - 0.00000000000000000000000000000000000000000000000000000000000000006376 228.0
DYD3_k127_4577447_8 Protein of unknown function (DUF938) - - - 0.000000000000000000000000000000000000000000000000007885 188.0
DYD3_k127_4577447_9 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000003787 183.0
DYD3_k127_4577931_0 COG0188 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) A subunit K02469 - 5.99.1.3 2.849e-286 900.0
DYD3_k127_4577931_1 COG0187 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) B subunit K02470,K02622 - 5.99.1.3 2.697e-278 880.0
DYD3_k127_4577931_10 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006312 340.0
DYD3_k127_4577931_11 Type II IV secretion system protein K02283,K03609 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004248 351.0
DYD3_k127_4577931_12 DNA methylase K00571 - 2.1.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007365 325.0
DYD3_k127_4577931_13 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002856 305.0
DYD3_k127_4577931_14 Site-specific DNA-methyltransferase (Adenine-specific) K06223 - 2.1.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005698 302.0
DYD3_k127_4577931_15 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K11206 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003072 304.0
DYD3_k127_4577931_16 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006113 283.0
DYD3_k127_4577931_17 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000003268 267.0
DYD3_k127_4577931_18 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002911 255.0
DYD3_k127_4577931_19 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000000000003299 228.0
DYD3_k127_4577931_2 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008746 582.0
DYD3_k127_4577931_21 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.00000000000000000000000000000000000000000000000000002684 192.0
DYD3_k127_4577931_22 OsmC-like protein K04063 - - 0.0000000000000000000000000000000000000000008787 160.0
DYD3_k127_4577931_23 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.0000000000000000000000000000000000002646 141.0
DYD3_k127_4577931_24 Uncharacterized ACR, COG1430 K09005 - - 0.000000000000000000000000000000000153 143.0
DYD3_k127_4577931_25 - - - - 0.0000000000000000000000000001894 126.0
DYD3_k127_4577931_29 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.0000000000000008331 78.0
DYD3_k127_4577931_3 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009054 565.0
DYD3_k127_4577931_30 - - - - 0.000000000000792 77.0
DYD3_k127_4577931_31 Uncharacterized ACR, COG1399 K07040 - - 0.00000000000224 75.0
DYD3_k127_4577931_4 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006195 526.0
DYD3_k127_4577931_5 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007375 465.0
DYD3_k127_4577931_6 HMGL-like K01640 - 4.1.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001595 449.0
DYD3_k127_4577931_7 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002185 446.0
DYD3_k127_4577931_8 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002722 443.0
DYD3_k127_4577931_9 Sigma-54 dependent transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004073 444.0
DYD3_k127_4591007_0 ABC transporter K10441 - 3.6.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005721 494.0
DYD3_k127_4591007_1 ABC-type sugar transport system periplasmic component K10439 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003672 403.0
DYD3_k127_4591007_2 Belongs to the binding-protein-dependent transport system permease family K02057,K10440 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005977 368.0
DYD3_k127_4591007_3 Cysteine-rich secretory protein family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003937 341.0
DYD3_k127_4591007_4 FecR protein - - - 0.00000000000000000000000000000001148 144.0
DYD3_k127_4591007_5 - - - - 0.000000000000000000000004576 103.0
DYD3_k127_4591007_6 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000003408 111.0
DYD3_k127_4623676_0 Raffinose synthase or seed imbibition protein Sip1 K06617 - 2.4.1.82 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003385 431.0
DYD3_k127_4623676_1 Belongs to the GARS family K01945 - 6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005846 407.0
DYD3_k127_4624624_1 Sulfatase-modifying factor enzyme 1 K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000001701 224.0
DYD3_k127_4624624_2 Putative metal-binding motif - - - 0.000000000000000000000000000000000000000000000000001447 203.0
DYD3_k127_4624624_3 General secretion pathway protein C K02452 - - 0.000000000000000000000000000000000000000006045 168.0
DYD3_k127_4663621_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 1.308e-299 943.0
DYD3_k127_4663621_1 Acyl-CoA dehydrogenase, C-terminal domain - - - 3.606e-239 752.0
DYD3_k127_4663621_10 - - - - 0.000000000000000000000000004941 116.0
DYD3_k127_4663621_11 Ferredoxin K04755,K11107 - - 0.00000000000000000000001024 104.0
DYD3_k127_4663621_2 Amidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 439.0
DYD3_k127_4663621_3 COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 400.0
DYD3_k127_4663621_4 Zinc-binding dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 306.0
DYD3_k127_4663621_5 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003154 253.0
DYD3_k127_4663621_6 PFAM ROK family protein K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000001487 191.0
DYD3_k127_4663621_7 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.000000000000000000000000000000000000000000000000347 179.0
DYD3_k127_4663621_8 Protein of unknown function (DUF420) K08976 - - 0.000000000000000000000000000000000007381 149.0
DYD3_k127_4672524_0 UTP--glucose-1-phosphate uridylyltransferase - - - 0.0 1290.0
DYD3_k127_4672524_1 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 1.091e-278 869.0
DYD3_k127_4672524_10 DNA-3-methyladenine glycosylase K01246 - 3.2.2.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008713 283.0
DYD3_k127_4672524_11 Rhomboid family K07059 - - 0.000000000000000000000000000000000000000000000000000000000000000009143 244.0
DYD3_k127_4672524_12 PFAM Nucleotidyl transferase K00963 - 2.7.7.9 0.000000000000000000000000000000000000000000000000000000000000001152 228.0
DYD3_k127_4672524_13 Belongs to the short-chain dehydrogenases reductases (SDR) family K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000006033 224.0
DYD3_k127_4672524_15 lysine 2,3-aminomutase K01843 - 5.4.3.2 0.00000000000000000000000000000000000000000000000000006731 188.0
DYD3_k127_4672524_16 Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( K02823 - - 0.000000000000000000000000000000000000000000003239 174.0
DYD3_k127_4672524_17 GTP cyclohydrolase I K01495 - 3.5.4.16 0.00000000000000000000000000000000000000000002439 169.0
DYD3_k127_4672524_18 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.0000000000000000000000000000000000000001463 159.0
DYD3_k127_4672524_19 - - - - 0.0000000000000000000000000000000000000008306 153.0
DYD3_k127_4672524_2 Carboxyl transferase domain K01966,K17489 - 2.1.3.1,2.1.3.15,6.4.1.3 4.051e-240 754.0
DYD3_k127_4672524_20 FR47-like protein K03789 - 2.3.1.128 0.00000000000000000000000000000000946 132.0
DYD3_k127_4672524_21 Uncharacterized conserved protein (DUF2203) - - - 0.00000000000000000000000000000005561 137.0
DYD3_k127_4672524_22 - - - - 0.0000000000000000000000000157 117.0
DYD3_k127_4672524_23 Psort location CytoplasmicMembrane, score - - - 0.000000000000000000000000037 125.0
DYD3_k127_4672524_3 PhoD-like phosphatase K01113 - 3.1.3.1 1.633e-198 644.0
DYD3_k127_4672524_4 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002387 593.0
DYD3_k127_4672524_5 Diadenosine tetraphosphatase and related serine threonine protein phosphatases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 426.0
DYD3_k127_4672524_6 Domain of unknown function (DUF4388) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005811 398.0
DYD3_k127_4672524_7 ABC transporter permease K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 335.0
DYD3_k127_4672524_8 Catalyzes the conversion of dihydroorotate to orotate K00254,K02823,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 327.0
DYD3_k127_4696313_0 NPCBM/NEW2 domain - - - 1.91e-252 807.0
DYD3_k127_4696313_1 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 432.0
DYD3_k127_4696313_2 Belongs to the glycosyl hydrolase 11 (cellulase G) family K01181 - 3.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008635 319.0
DYD3_k127_4696313_3 Belongs to the glycosyl hydrolase 5 (cellulase A) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001383 278.0
DYD3_k127_4696313_5 Trehalose utilisation K09992 - - 0.00000000000000000000000000000001474 142.0
DYD3_k127_4696313_6 protein TIM barrel - - - 0.0000000000000000000000003306 119.0
DYD3_k127_4696313_7 Membrane - - - 0.000000000000000000003896 105.0
DYD3_k127_4696313_8 amine dehydrogenase activity - - - 0.0000000000003239 82.0
DYD3_k127_4696313_9 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000009691 72.0
DYD3_k127_4714243_0 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K12251 - 3.5.1.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001464 391.0
DYD3_k127_4714243_1 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003736 384.0
DYD3_k127_4714243_2 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007852 304.0
DYD3_k127_4714243_3 Belongs to the agmatine deiminase family K10536 - 3.5.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000002679 267.0
DYD3_k127_4729800_0 deoxyhypusine monooxygenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006533 439.0
DYD3_k127_4729800_1 Belongs to the FtsK SpoIIIE SftA family K03466 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003334 289.0
DYD3_k127_4729800_2 Forkhead associated domain - - - 0.0000000000000000000000000000000000000000000000000000009966 201.0
DYD3_k127_4729800_3 protein conserved in bacteria - - - 0.000000000000000000000000000000000000007047 156.0
DYD3_k127_4737690_0 Ribosomal protein S1-like RNA-binding domain K02945 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003885 499.0
DYD3_k127_4737690_1 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007624 430.0
DYD3_k127_4737690_2 RNA polymerase sigma factor K03088 - - 0.000000000000000000000000000000000000000000000006149 176.0
DYD3_k127_4766676_0 Hydantoinase B/oxoprolinase K01469 - 3.5.2.9 0.0 1287.0
DYD3_k127_4766676_1 tRNA synthetases class II (D, K and N) K04568 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 380.0
DYD3_k127_4766676_2 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.00000000000000000000000000000000000000000000000000000000000000000002626 236.0
DYD3_k127_4766676_3 Domain of unknown function (DUF4336) - - - 0.000000000000000000000000000000000000000000001508 173.0
DYD3_k127_4766676_4 Pterin 4 alpha carbinolamine dehydratase K01724 - 4.2.1.96 0.000000000000000000000000000000004042 130.0
DYD3_k127_4766676_5 TIGRFAM type III secretion protein, HrpO family K03227 - - 0.00000004412 62.0
DYD3_k127_4784507_0 DJ-1/PfpI family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 432.0
DYD3_k127_4784507_1 COG2040 Homocysteine selenocysteine methylase (S-methylmethionine-dependent) K00547 - 2.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008791 429.0
DYD3_k127_4784507_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 353.0
DYD3_k127_4784507_3 - - - - 0.000000000000000000000000000000000000000000003681 181.0
DYD3_k127_4784507_4 Tetratricopeptide repeat - - - 0.00000000002094 77.0
DYD3_k127_4784507_5 - - - - 0.000000274 55.0
DYD3_k127_4792212_0 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 310.0
DYD3_k127_4792212_1 amino acid ABC transporter, ATP-binding protein K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003265 304.0
DYD3_k127_4792212_2 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 301.0
DYD3_k127_4792212_3 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003124 274.0
DYD3_k127_4792212_4 High-affinity branched-chain amino acid transport protein (ABC superfamily K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000007619 257.0
DYD3_k127_4792212_5 Macrocin-O-methyltransferase (TylF) - - - 0.0000000000000000000000002936 113.0
DYD3_k127_4792212_6 SPTR PIN domain protein like protein - - - 0.00000000000003794 74.0
DYD3_k127_4813147_0 Belongs to the 5'-nucleotidase family K01081 - 3.1.3.5 5.286e-199 640.0
DYD3_k127_4813147_1 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006799 591.0
DYD3_k127_4813147_10 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K00082,K11752 - 1.1.1.193,3.5.4.26 0.0003328 44.0
DYD3_k127_4813147_2 exo-alpha-(2->6)-sialidase activity K01186 GO:0001573,GO:0003674,GO:0003824,GO:0004308,GO:0004553,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006629,GO:0006643,GO:0006664,GO:0006665,GO:0006672,GO:0006687,GO:0006689,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009311,GO:0009313,GO:0009987,GO:0016020,GO:0016042,GO:0016052,GO:0016787,GO:0016798,GO:0016997,GO:0019377,GO:0030149,GO:0034641,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043603,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044424,GO:0044464,GO:0046466,GO:0046479,GO:0046514,GO:0071704,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575,GO:1903509 3.2.1.18 0.0000000000000000000000000000000000000000000000000000000000001557 236.0
DYD3_k127_4813147_3 PFAM RES domain protein - - - 0.000000000000000000000000000000000000000000000000000000007723 207.0
DYD3_k127_4813147_4 PFAM Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000001689 153.0
DYD3_k127_4813147_5 Belongs to the ompA family - - - 0.00000000000000000000000000000000009882 151.0
DYD3_k127_4813147_6 Sensors of blue-light using FAD - - - 0.000000000000000000000005215 106.0
DYD3_k127_4813147_7 pectinesterase activity K01224,K03932 - 3.2.1.89 0.00000000000000000007383 90.0
DYD3_k127_4813147_8 phage shock protein A, PspA K03969 - - 0.00000000000000002015 91.0
DYD3_k127_4813147_9 amino acid activation for nonribosomal peptide biosynthetic process K05996 - 3.4.17.18 0.0000000000000302 86.0
DYD3_k127_4840079_0 WD40-like Beta Propeller Repeat - - - 1.333e-257 837.0
DYD3_k127_4840079_1 ABC transporter K09812 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002296 350.0
DYD3_k127_4840079_10 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.0000004001 64.0
DYD3_k127_4840079_2 Protein kinase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004758 346.0
DYD3_k127_4840079_3 NAD(P)H-binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002236 325.0
DYD3_k127_4840079_4 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004417 278.0
DYD3_k127_4840079_5 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000003121 262.0
DYD3_k127_4840079_6 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000004339 246.0
DYD3_k127_4840079_7 Peptidase family M23 K21471 - - 0.00000000000000000000000000000000000000000000000000000000001751 229.0
DYD3_k127_4840079_8 PilZ domain - - - 0.0000000000000000000000000000000000000000001547 171.0
DYD3_k127_4840079_9 TIGRFAM cell envelope-related function transcriptional attenuator, LytR CpsA family - - - 0.00000000000000000000000000007726 129.0
DYD3_k127_4851857_0 acetolactate synthase K01576,K01652 - 2.2.1.6,4.1.1.7 3.199e-275 857.0
DYD3_k127_4851857_1 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 1.654e-232 732.0
DYD3_k127_4851857_2 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 1.612e-226 711.0
DYD3_k127_4851857_3 ACT domain K01653 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000002911 218.0
DYD3_k127_4851857_4 PFAM phosphoesterase, RecJ domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000001238 227.0
DYD3_k127_4851857_5 Zinc-binding dehydrogenase K00008,K00148,K18369 - 1.1.1.14,1.2.1.46 0.00000000000000000000000000000000000000000000000000000000002705 207.0
DYD3_k127_4851857_6 - - - - 0.0000000000000000000000000000000000000000001448 170.0
DYD3_k127_4851857_7 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000000001513 151.0
DYD3_k127_4851857_9 Involved in the tonB-independent uptake of proteins K03641 - - 0.000000000000000002371 98.0
DYD3_k127_4875329_1 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 1.697e-254 801.0
DYD3_k127_4875329_10 WYL domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004472 393.0
DYD3_k127_4875329_11 CAAX protease self-immunity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001338 386.0
DYD3_k127_4875329_13 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002557 308.0
DYD3_k127_4875329_14 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004462 270.0
DYD3_k127_4875329_15 FHA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008475 265.0
DYD3_k127_4875329_16 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000004102 257.0
DYD3_k127_4875329_19 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000002046 226.0
DYD3_k127_4875329_2 Signal transduction histidine kinase - - - 3.868e-219 700.0
DYD3_k127_4875329_20 Transglycosylase K08309 - - 0.00000000000000000000000000000000000000000000000000000000000006212 219.0
DYD3_k127_4875329_21 SpoU rRNA Methylase family K00556 - 2.1.1.34 0.000000000000000000000000000000000000000000000000000000000002482 216.0
DYD3_k127_4875329_22 Belongs to the NiCoT transporter (TC 2.A.52) family - - - 0.00000000000000000000000000000000000000000000000192 181.0
DYD3_k127_4875329_23 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.7.18 0.000000000000000000000000000000000000000000003975 170.0
DYD3_k127_4875329_24 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000004486 170.0
DYD3_k127_4875329_25 Belongs to the thioredoxin family K03671 - - 0.000000000000000000000000000000000000002597 149.0
DYD3_k127_4875329_26 transcriptional regulator K07722 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000001033 138.0
DYD3_k127_4875329_27 Integral membrane protein CcmA involved in cell shape determination - - - 0.0000000000000000000000000000000001202 138.0
DYD3_k127_4875329_28 Rhodanese Homology Domain - - - 0.000000000000000000000000000000001853 134.0
DYD3_k127_4875329_29 Redoxin K02199 - - 0.000000000000000000000000000000001983 136.0
DYD3_k127_4875329_3 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002591 608.0
DYD3_k127_4875329_32 - - - - 0.000000000000000000000000007163 117.0
DYD3_k127_4875329_33 Polymer-forming cytoskeletal - - - 0.000000000000000000000004822 108.0
DYD3_k127_4875329_34 - - - - 0.00000000000000000000001359 108.0
DYD3_k127_4875329_35 Protein of unknown function (DUF2505) - - - 0.0000000000000000000006689 102.0
DYD3_k127_4875329_36 Integral membrane protein CcmA involved in cell shape determination - - - 0.0000000000000000001292 96.0
DYD3_k127_4875329_4 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002093 549.0
DYD3_k127_4875329_5 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 467.0
DYD3_k127_4875329_6 M18 family aminopeptidase K01267 - 3.4.11.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005504 461.0
DYD3_k127_4875329_7 Signal transduction histidine kinase K13598 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009565 439.0
DYD3_k127_4875329_8 Di-haem oxidoreductase, putative peroxidase K01201 - 3.2.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 441.0
DYD3_k127_4875329_9 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003234 418.0
DYD3_k127_4878244_1 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 516.0
DYD3_k127_4878244_11 Belongs to the HesB IscA family K13628 - - 0.00000000000000000000000000000000000000000000001535 173.0
DYD3_k127_4878244_12 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000005089 137.0
DYD3_k127_4878244_13 Protein of unknown function (DUF533) K11962 - - 0.00000000000000000000000000000000307 133.0
DYD3_k127_4878244_14 - - - - 0.0000000000000000000001771 106.0
DYD3_k127_4878244_15 Biotin-requiring enzyme - - - 0.0000000000000009171 85.0
DYD3_k127_4878244_17 AMMECR1 K06990,K09141 - - 0.00000004095 58.0
DYD3_k127_4878244_2 Sulfatase K01133 - 3.1.6.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 524.0
DYD3_k127_4878244_3 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001959 377.0
DYD3_k127_4878244_4 Pyridoxal-phosphate dependent enzyme K05396 - 4.4.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003235 349.0
DYD3_k127_4878244_5 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003623 342.0
DYD3_k127_4878244_6 Belongs to the 'phage' integrase family. XerC subfamily K03733,K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008201 336.0
DYD3_k127_4878244_7 ABC-type transport system involved in multi-copper enzyme maturation permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000806 283.0
DYD3_k127_4878244_9 prohibitin homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000007892 241.0
DYD3_k127_4891998_0 cell adhesion involved in biofilm formation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005407 447.0
DYD3_k127_4891998_1 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005208 271.0
DYD3_k127_4891998_2 lipolytic protein G-D-S-L family - - - 0.00000000000000000000000000000000000000000000000000000000000001135 228.0
DYD3_k127_4891998_3 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000003465 128.0
DYD3_k127_4903002_0 Peptidase family M3 K01414 - 3.4.24.70 4.711e-246 776.0
DYD3_k127_4903002_1 Transcription factor zinc-finger - - - 0.000000000000000000000000000000000000000000000008158 180.0
DYD3_k127_4903002_2 Enoyl-(Acyl carrier protein) reductase K00208 - 1.3.1.10,1.3.1.9 0.000000000003767 68.0
DYD3_k127_491010_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 1.795e-247 782.0
DYD3_k127_491010_1 Peptidase family M50 K11749 - - 5.216e-207 658.0
DYD3_k127_491010_2 PFAM thioesterase superfamily protein - - - 0.000000000000000000000000000000000004017 157.0
DYD3_k127_491010_3 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.000000000000000000000005519 109.0
DYD3_k127_491010_4 Peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.0000000000000000001495 93.0
DYD3_k127_4929753_0 amine dehydrogenase activity - - - 5.656e-208 704.0
DYD3_k127_4929753_1 amine dehydrogenase activity K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004531 515.0
DYD3_k127_4929753_10 - - - - 0.00000000000007114 78.0
DYD3_k127_4929753_11 nuclease activity - - - 0.0000006825 53.0
DYD3_k127_4929753_12 - K18829 - - 0.0000007305 54.0
DYD3_k127_4929753_2 cell envelope organization K05807,K08309 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008065 312.0
DYD3_k127_4929753_3 D-alanyl-D-alanine carboxypeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003071 285.0
DYD3_k127_4929753_4 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000002831 230.0
DYD3_k127_4929753_5 Serine Threonine protein kinase K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000011 191.0
DYD3_k127_4929753_8 Toxic component of a toxin-antitoxin (TA) module. An RNase K18828 - - 0.000000000000000000000000000000203 128.0
DYD3_k127_4939922_0 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007381 528.0
DYD3_k127_4939922_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006461 351.0
DYD3_k127_4939922_2 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001853 321.0
DYD3_k127_4939922_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004341 285.0
DYD3_k127_4939922_4 pyrroloquinoline quinone binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001239 282.0
DYD3_k127_4948466_0 AMP-binding enzyme K12508 - 6.2.1.34 4.262e-225 714.0
DYD3_k127_4948466_1 Thiolase, C-terminal domain K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002833 560.0
DYD3_k127_4948466_10 ABC transporter K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001106 264.0
DYD3_k127_4948466_11 Sigma-54 dependent transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000002612 245.0
DYD3_k127_4948466_12 Belongs to the peptidase S8 family K12287,K12516,K20276 - - 0.000000000000000000000000000000000000000000000000001014 202.0
DYD3_k127_4948466_13 ATP-dependent protease La (LON) substrate-binding domain K01338,K07157 - 3.4.21.53 0.00000000000000000000000000000000000000000002449 169.0
DYD3_k127_4948466_14 histidine kinase A domain protein - - - 0.0000000002511 70.0
DYD3_k127_4948466_15 positive regulation of acetylcholine metabolic process K06910 GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 - 0.000008213 55.0
DYD3_k127_4948466_2 Receptor family ligand binding region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003841 479.0
DYD3_k127_4948466_3 ATP-binding region ATPase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006505 380.0
DYD3_k127_4948466_4 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 356.0
DYD3_k127_4948466_5 Branched-chain amino acid transport system / permease component K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005069 342.0
DYD3_k127_4948466_6 Branched-chain amino acid transport system / permease component K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000261 336.0
DYD3_k127_4948466_7 lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003998 317.0
DYD3_k127_4948466_8 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K15546 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005337 303.0
DYD3_k127_4948466_9 COG0411 ABC-type branched-chain amino acid transport systems, ATPase component K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003379 295.0
DYD3_k127_4952887_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 2.61e-205 648.0
DYD3_k127_4952887_1 - - - - 3.176e-197 647.0
DYD3_k127_4952887_2 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 GO:0003674,GO:0003824,GO:0004038,GO:0004151,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006145,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046390,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007778 591.0
DYD3_k127_4952887_3 TIGRFAM carbamoyl-phosphate synthase, small subunit K01956 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002136 447.0
DYD3_k127_4952887_4 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004891 338.0
DYD3_k127_4982134_0 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000427 569.0
DYD3_k127_4982134_1 Transketolase, pyrimidine binding domain K00162,K00167 - 1.2.4.1,1.2.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 519.0
DYD3_k127_4982134_10 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000001578 207.0
DYD3_k127_4982134_11 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.000000000000000000000000000000000000000000000000000000003856 212.0
DYD3_k127_4982134_12 - - - - 0.0000000000000000000000000000000000000000000000005345 190.0
DYD3_k127_4982134_13 Heat shock protein DnaJ domain protein - - - 0.0000000000000000000000000000000000000000000001245 178.0
DYD3_k127_4982134_15 Protein of unknown function (DUF533) K06596 - - 0.00000000000000000000000000000000000003611 149.0
DYD3_k127_4982134_16 Binds together with S18 to 16S ribosomal RNA K02990 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000115 151.0
DYD3_k127_4982134_17 binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000001495 136.0
DYD3_k127_4982134_18 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000006911 111.0
DYD3_k127_4982134_19 - - - - 0.000000000000000001466 95.0
DYD3_k127_4982134_2 Dehydrogenase E1 component K00161,K00166 - 1.2.4.1,1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001799 490.0
DYD3_k127_4982134_3 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002957 474.0
DYD3_k127_4982134_4 acetyltransferase component of pyruvate dehydrogenase complex K00627 - 2.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004591 475.0
DYD3_k127_4982134_5 Diacylglycerol kinase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009032 446.0
DYD3_k127_4982134_6 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 442.0
DYD3_k127_4982134_7 Protein kinase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002525 422.0
DYD3_k127_4982134_8 peroxidase activity K00435 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 344.0
DYD3_k127_4982134_9 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000513 250.0
DYD3_k127_5018849_0 PFAM FAD linked oxidase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008414 503.0
DYD3_k127_5018849_1 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000555 263.0
DYD3_k127_5018849_10 - - - - 0.00000003809 65.0
DYD3_k127_5018849_11 CBS domain K04767 - - 0.0000228 55.0
DYD3_k127_5018849_2 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000003342 241.0
DYD3_k127_5018849_3 Putative neutral zinc metallopeptidase K07054 - - 0.00000000000000000000000000000000000000000000000000000000000000006009 233.0
DYD3_k127_5018849_4 Protein of unknown function (DUF1592) - - - 0.000000000000000000000000000000000000000000000000000000000003392 231.0
DYD3_k127_5018849_5 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000001202 215.0
DYD3_k127_5018849_7 negative regulation of phosphate transmembrane transport K01104,K02039,K03741 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009892,GO:0010563,GO:0010966,GO:0019220,GO:0019222,GO:0031323,GO:0031324,GO:0032879,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0042802,GO:0042803,GO:0043269,GO:0043271,GO:0044070,GO:0044424,GO:0044464,GO:0045936,GO:0046983,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051049,GO:0051051,GO:0051174,GO:0065007,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 1.20.4.1,3.1.3.48 0.000000000000000000000000000000000001047 153.0
DYD3_k127_5018849_8 Zn peptidase - - - 0.000000008203 68.0
DYD3_k127_5029103_0 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007058 374.0
DYD3_k127_5029103_1 Belongs to the sigma-70 factor family K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 371.0
DYD3_k127_5029103_10 protein transport across the cell outer membrane - - - 0.000000000006323 73.0
DYD3_k127_5029103_11 protein conserved in bacteria - - - 0.000000004807 66.0
DYD3_k127_5029103_2 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006061 336.0
DYD3_k127_5029103_3 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005569 302.0
DYD3_k127_5029103_4 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.00000000000000000000000000000000000000000000000000000003567 205.0
DYD3_k127_5029103_6 Beta-L-arabinofuranosidase, GH127 - - - 0.0000000000000000000000000000000003691 146.0
DYD3_k127_5029103_9 YCII-related domain - - - 0.00000000000000000000000134 115.0
DYD3_k127_5037933_0 alpha beta - - - 8.479e-215 686.0
DYD3_k127_5037933_1 Protein of unknown function, DUF255 K06888 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002006 617.0
DYD3_k127_5037933_10 synthase homocitrate synthase family K01649 - 2.3.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002455 350.0
DYD3_k127_5037933_11 Galactose oxidase, central domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002309 298.0
DYD3_k127_5037933_12 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003265 270.0
DYD3_k127_5037933_13 Protein of unknown function (DUF1365) K09701 - - 0.00000000000000000000000000000000000000000000000000000000000003275 240.0
DYD3_k127_5037933_14 N-Acetylmuramoyl-L-alanine amidase K01447,K03806,K11066 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000002925 225.0
DYD3_k127_5037933_15 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000002404 184.0
DYD3_k127_5037933_16 protein containing a von Willebrand factor type A (vWA) domain - - - 0.0000000000000000000000000000000000000000000002259 181.0
DYD3_k127_5037933_17 purine nucleotide biosynthetic process K02529 - - 0.0000000000000000000000000000000000000000000003714 181.0
DYD3_k127_5037933_18 Belongs to the peptidase S1B family K04775 - - 0.00000000000000000000009675 106.0
DYD3_k127_5037933_19 Putative prokaryotic signal transducing protein - - - 0.0000000000000000002384 93.0
DYD3_k127_5037933_2 TIGRFAM 40-residue YVTN family beta-propeller repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001885 501.0
DYD3_k127_5037933_20 - - - - 0.0000000000000000002911 98.0
DYD3_k127_5037933_21 PFAM BNR Asp-box repeat - - - 0.0000000000007772 81.0
DYD3_k127_5037933_22 - - - - 0.00000000002441 73.0
DYD3_k127_5037933_24 Protein of unknown function (DUF2878) - - - 0.000000001515 67.0
DYD3_k127_5037933_26 domain, Protein - - - 0.0002219 53.0
DYD3_k127_5037933_27 PFAM Mo-dependent nitrogenase - - - 0.0002749 50.0
DYD3_k127_5037933_28 Major facilitator superfamily - - - 0.0003578 51.0
DYD3_k127_5037933_3 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00261,K00262 - 1.4.1.3,1.4.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003019 471.0
DYD3_k127_5037933_4 Protein of unknown function (DUF1624) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 436.0
DYD3_k127_5037933_5 FAD dependent oxidoreductase K06954 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004746 415.0
DYD3_k127_5037933_6 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002201 385.0
DYD3_k127_5037933_7 Belongs to the N(4) N(6)-methyltransferase family K00590 - 2.1.1.113 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009651 381.0
DYD3_k127_5037933_8 Bacterial regulatory protein, Fis family K02481,K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008198 381.0
DYD3_k127_5037933_9 synthase K00574 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003295 370.0
DYD3_k127_5076237_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1079.0
DYD3_k127_5076237_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001535 485.0
DYD3_k127_5076237_2 oxidoreductase activity K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003774 350.0
DYD3_k127_5076237_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004041 290.0
DYD3_k127_5076237_4 protein conserved in cyanobacteria - - - 0.00000000000000000000000000000000000000000000000000000000001798 211.0
DYD3_k127_5076237_5 Concanavalin A-like lectin/glucanases superfamily - - - 0.00000000000000000000000000000000000000000000000001474 201.0
DYD3_k127_5076237_6 Belongs to the ABC transporter superfamily K02031,K02032,K10823,K10824 - 3.6.3.24 0.00000000000000000000004989 99.0
DYD3_k127_5076237_7 lipolytic protein G-D-S-L family - - - 0.000000000000000000001102 110.0
DYD3_k127_5096743_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 4.832e-287 902.0
DYD3_k127_5096743_1 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000004172 229.0
DYD3_k127_5096743_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.0000000000000000000000000001678 124.0
DYD3_k127_512150_0 DNA-binding response regulator K07713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005028 503.0
DYD3_k127_512150_1 Phospholipase D. Active site motifs. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002278 388.0
DYD3_k127_512150_10 - - - - 0.0000000000000000000000000000000000006402 151.0
DYD3_k127_512150_11 - - - - 0.0000000000000000000000000000005624 132.0
DYD3_k127_512150_12 - - - - 0.00000000000000000000000000005618 121.0
DYD3_k127_512150_13 AI-2E family transporter - - - 0.00000000000000000000000002903 124.0
DYD3_k127_512150_14 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity - - - 0.0000000000000000003074 94.0
DYD3_k127_512150_15 MgtC family K07507 - - 0.00000000000000003318 92.0
DYD3_k127_512150_16 regulation of translation K05808 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006417,GO:0006448,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015935,GO:0017148,GO:0019222,GO:0022626,GO:0022627,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0043021,GO:0043022,GO:0043024,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0045900,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:1990904,GO:2000112,GO:2000113 - 0.00000000000000004836 85.0
DYD3_k127_512150_17 MgtC family K07507 - - 0.000001036 51.0
DYD3_k127_512150_18 BON domain - - - 0.000004674 53.0
DYD3_k127_512150_2 Integral membrane protein TerC family K05794 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002212 323.0
DYD3_k127_512150_3 PFAM Cation efflux - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001205 265.0
DYD3_k127_512150_4 PFAM Haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003218 244.0
DYD3_k127_512150_5 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000001505 241.0
DYD3_k127_512150_6 Bacterioferritin (cytochrome b1) K03594 - 1.16.3.1 0.00000000000000000000000000000000000000000000000000000000000001187 227.0
DYD3_k127_512150_7 PFAM Ribonuclease BN-like family K07058 - - 0.00000000000000000000000000000000000000000000000000112 198.0
DYD3_k127_512150_8 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000000000000000000000000000000000000000000001114 197.0
DYD3_k127_5143498_0 FGGY family of carbohydrate kinases, N-terminal domain K00854 - 2.7.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003204 593.0
DYD3_k127_5143498_1 COGs COG0076 Glutamate decarboxylase and related PLP-dependent protein K01634 - 4.1.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000327 584.0
DYD3_k127_5143498_10 Belongs to the sigma-70 factor family K02405 - - 0.0000000000000000000000000000000000001449 153.0
DYD3_k127_5143498_11 helix-turn-helix- domain containing protein AraC type - - - 0.0000000000000000000000008651 116.0
DYD3_k127_5143498_12 - - - - 0.00000000001787 73.0
DYD3_k127_5143498_14 Cupin domain - - - 0.00007829 52.0
DYD3_k127_5143498_2 Sel1-like repeats. K07126 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008982 549.0
DYD3_k127_5143498_3 Amidase K01426 - 3.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001902 524.0
DYD3_k127_5143498_4 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001965 417.0
DYD3_k127_5143498_5 Voltage gated chloride channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000162 356.0
DYD3_k127_5143498_6 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000000000000000000000000000000000000000000000000000000002132 255.0
DYD3_k127_5143498_8 CAAX protease self-immunity K07052 - - 0.00000000000000000000000000000000000000000000000002105 186.0
DYD3_k127_5143498_9 - - - - 0.00000000000000000000000000000000000004548 155.0
DYD3_k127_5153861_0 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 6.943e-210 672.0
DYD3_k127_5153861_1 Aconitase C-terminal domain K01703 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003679 587.0
DYD3_k127_5153861_10 - - - - 0.00000000000000000000001528 107.0
DYD3_k127_5153861_11 Peptidyl-prolyl cis-trans K03775 - 5.2.1.8 0.0000000000000000000006362 109.0
DYD3_k127_5153861_2 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002282 448.0
DYD3_k127_5153861_3 Domain present in PSD-95, Dlg, and ZO-1/2. K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 404.0
DYD3_k127_5153861_4 alpha beta - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006978 316.0
DYD3_k127_5153861_5 PFAM Formylglycine-generating sulfatase enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 314.0
DYD3_k127_5153861_6 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003993 300.0
DYD3_k127_5153861_7 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008209 263.0
DYD3_k127_5153861_9 Domain of unknown function (DUF1844) - - - 0.000000000000000000000000000000386 126.0
DYD3_k127_5162555_0 Two component, sigma54 specific, transcriptional regulator, Fis family - - - 2.562e-200 634.0
DYD3_k127_5162555_1 Protein of unknown function (DUF1552) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002508 415.0
DYD3_k127_5162555_12 Tetratricopeptide repeat - - - 0.00000000000000000000007265 103.0
DYD3_k127_5162555_14 beta-lactamase activity K01058,K07502 - 3.1.1.32,3.1.1.4 0.00000000000000000000126 108.0
DYD3_k127_5162555_16 - - - - 0.000000000007065 74.0
DYD3_k127_5162555_17 Kelch motif - - - 0.0000001355 65.0
DYD3_k127_5162555_2 Protein of unknown function (DUF1587) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 391.0
DYD3_k127_5162555_3 Belongs to the DNA photolyase family K01669 - 4.1.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002802 372.0
DYD3_k127_5162555_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003873 368.0
DYD3_k127_5162555_5 DnaJ molecular chaperone homology domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001504 274.0
DYD3_k127_5162555_6 Acetyltransferase (GNAT) domain K03823 - 2.3.1.183 0.00000000000000000000000000000000000000000000000000000000000000000002961 237.0
DYD3_k127_5162555_7 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.0000000000000000000000000000000000000000000000000000004108 198.0
DYD3_k127_5162555_8 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000132 209.0
DYD3_k127_5162555_9 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.0000000000000000000000000000000000000000000000000004584 202.0
DYD3_k127_5165225_0 Dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000008729 241.0
DYD3_k127_5165225_1 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000007126 209.0
DYD3_k127_5165225_2 Vitamin K epoxide reductase family - - - 0.00000000000000000000003376 111.0
DYD3_k127_5165225_3 COG2801 Transposase and inactivated derivatives K07497 GO:0008150,GO:0009987,GO:0032196 - 0.000000000000004712 79.0
DYD3_k127_5165225_4 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.00000006848 65.0
DYD3_k127_5165874_0 Belongs to the FtsK SpoIIIE SftA family K03466 - - 1.914e-243 779.0
DYD3_k127_5165874_1 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009868 555.0
DYD3_k127_5165874_11 histone H2A K63-linked ubiquitination - - - 0.000000000000000003202 86.0
DYD3_k127_5165874_2 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002449 463.0
DYD3_k127_5165874_3 deoxyhypusine monooxygenase activity K01256,K02563,K08776,K12132 - 2.4.1.227,2.7.11.1,3.4.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006185 449.0
DYD3_k127_5165874_4 Peptidase family M50 K11749 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009717 341.0
DYD3_k127_5165874_5 nucleotide metabolic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002786 295.0
DYD3_k127_5165874_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008636 266.0
DYD3_k127_5165874_7 CBS domain containing protein - - - 0.000000000000000000000000000000000000000000000000001762 198.0
DYD3_k127_5165874_8 - - - - 0.000000000000000000000000000000000000000000000003123 182.0
DYD3_k127_5180755_0 SNF2 family N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007087 556.0
DYD3_k127_5180755_1 Methionine biosynthesis protein MetW - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002369 257.0
DYD3_k127_5180755_2 TIR domain - - - 0.00000000000000000000000000000008204 134.0
DYD3_k127_5180755_3 Belongs to the phosphoglycerate mutase family K22305 - 3.1.3.3 0.0000000000000002714 92.0
DYD3_k127_5180755_4 PFAM DnaB domain protein helicase domain protein - - - 0.000000008264 67.0
DYD3_k127_5180755_5 glycosyl transferase group 1 - - - 0.0000009336 61.0
DYD3_k127_526963_1 Metal dependent phosphohydrolases with conserved 'HD' motif. K06885 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002318 512.0
DYD3_k127_526963_2 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008909 497.0
DYD3_k127_526963_3 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 451.0
DYD3_k127_526963_4 Protein kinase domain K08884 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001898 396.0
DYD3_k127_526963_5 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004179 290.0
DYD3_k127_526963_7 Cytochrome c554 and c-prime - - - 0.000000000000000000000000000000002322 135.0
DYD3_k127_526963_8 Tetratricopeptide repeat - - - 0.00000000000000000000000000002571 130.0
DYD3_k127_5320122_0 Carboxyl transferase domain K01966,K17489 - 2.1.3.1,2.1.3.15,6.4.1.3 4.355e-222 704.0
DYD3_k127_5320122_1 TonB-dependent Receptor Plug Domain - - - 4.245e-204 664.0
DYD3_k127_5320122_2 cytochrome C peroxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005551 391.0
DYD3_k127_5320122_4 Histidine triad (HIT) protein K02503 - - 0.0000003 62.0
DYD3_k127_5330607_0 Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family K01428 - 3.5.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002394 574.0
DYD3_k127_5330607_1 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001535 336.0
DYD3_k127_5330607_2 amine dehydrogenase activity K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000001034 257.0
DYD3_k127_5330607_3 Required for maturation of urease via the functional incorporation of the urease nickel metallocenter K03190 - - 0.0000000000000000000000000000000000000000000000000000000000000000004195 239.0
DYD3_k127_5330607_4 Belongs to the glycosyl hydrolase family 6 K01218 - 3.2.1.78 0.0000000000000000000000000000000000000000000000000001348 210.0
DYD3_k127_5330607_5 Urease, gamma subunit K01430,K14048 - 3.5.1.5 0.0000000000000000000000000000000000000000000000006766 179.0
DYD3_k127_5330607_6 in Brucella suis the urease encoded by this operon (one of two urease-encoding operons found in its genome) is involved with urease activity, optimum growth, resistance to low-pH killing in-vitro and persistence in-vivo, while the other operon does not seem to be active K01429 GO:0003674,GO:0003824,GO:0006807,GO:0008150,GO:0008152,GO:0009039,GO:0016787,GO:0016810,GO:0016811 3.5.1.5 0.000000000000000000000000000000000000000000002622 165.0
DYD3_k127_5338591_0 Lysin motif K08307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002518 493.0
DYD3_k127_5338591_1 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042,K11528 - 2.3.1.157,2.7.7.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006308 325.0
DYD3_k127_5338591_2 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679,K01744 - 4.2.1.2,4.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005708 287.0
DYD3_k127_5338591_3 Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate K01497 - 3.5.4.25 0.0000000000000000000000000000000000000000000000000000000003934 206.0
DYD3_k127_5338591_4 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042,K11528 - 2.3.1.157,2.7.7.23 0.00000000000000000000000000000000000000000000001494 172.0
DYD3_k127_5380756_0 N-terminal half of MaoC dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000355 323.0
DYD3_k127_5380756_1 Family membership K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003763 306.0
DYD3_k127_5380756_2 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004428 255.0
DYD3_k127_5380756_3 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.00000000000000000000000000000000000000000000000000000000000000002686 243.0
DYD3_k127_5380756_5 Type III secretion K03228 - - 0.0003013 51.0
DYD3_k127_538606_0 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000000000000000000005355 164.0
DYD3_k127_538606_1 Belongs to the TrpF family K01817 - 5.3.1.24 0.0000000000000000000000000000000000000001493 158.0
DYD3_k127_538606_2 Belongs to the glycosyl hydrolase family 6 K01179,K20628 - 3.2.1.4 0.0000000000002262 81.0
DYD3_k127_538606_3 Epidermal growth factor-like domain. - - - 0.00000000001419 78.0
DYD3_k127_538606_4 FecR protein - - - 0.0000000104 65.0
DYD3_k127_538606_5 serine-type endopeptidase inhibitor activity - GO:0003674,GO:0005198,GO:0005201,GO:0005575,GO:0005576,GO:0005604,GO:0008150,GO:0009987,GO:0016043,GO:0030198,GO:0031012,GO:0043062,GO:0044421,GO:0062023,GO:0071840 - 0.00000004434 65.0
DYD3_k127_5388640_0 Belongs to the glycosyl hydrolase 67 family K01235 GO:0000272,GO:0003674,GO:0003824,GO:0004553,GO:0005975,GO:0005976,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010383,GO:0010410,GO:0010413,GO:0016052,GO:0016787,GO:0016798,GO:0033939,GO:0043170,GO:0044036,GO:0044237,GO:0044238,GO:0044260,GO:0045491,GO:0045493,GO:0071554,GO:0071704,GO:1901575,GO:2000886 3.2.1.139 0.0 1056.0
DYD3_k127_5388640_1 GDSL-like Lipase/Acylhydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001707 453.0
DYD3_k127_5398617_0 Cation transport protein K03498 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000044 462.0
DYD3_k127_5398617_1 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001238 373.0
DYD3_k127_5398617_2 TrkA-C domain K03499 - - 0.000000000000000000000000000000000000000000000000000000000009755 214.0
DYD3_k127_5406631_0 von Willebrand factor type A domain - - - 0.0 1087.0
DYD3_k127_5406631_1 Aerotolerance regulator N-terminal - - - 2.961e-210 673.0
DYD3_k127_5406631_10 Cysteine-rich domain K18928 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004094 315.0
DYD3_k127_5406631_11 Protein of unknown function DUF89 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001299 253.0
DYD3_k127_5406631_12 oxidoreductase activity K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000005016 240.0
DYD3_k127_5406631_13 Putative glycolipid-binding K09957 - - 0.00000000000000000000000000000000000000000000000000000000000003181 221.0
DYD3_k127_5406631_14 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 GO:0003674,GO:0003824,GO:0004595,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 0.0000000000000000000000000000000000000000000000000000000005087 225.0
DYD3_k127_5406631_15 LUD domain K00782 - - 0.000000000000000000000000000000000000000000000002068 187.0
DYD3_k127_5406631_16 - - - - 0.0000000000000000000000000000000005353 152.0
DYD3_k127_5406631_17 Putative beta-barrel porin-2, OmpL-like. bbp2 - - - 0.000000000000000000000000002844 129.0
DYD3_k127_5406631_18 - - - - 0.000000000000000000000001085 113.0
DYD3_k127_5406631_19 Protein of unknown function (DUF2662) - GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944,GO:0097159,GO:1901363 - 0.0000000000002887 84.0
DYD3_k127_5406631_2 Domain of unknown function (DUF3390) K18929 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009624 594.0
DYD3_k127_5406631_3 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002191 559.0
DYD3_k127_5406631_4 ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003027 443.0
DYD3_k127_5406631_5 Von Willebrand factor type A - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001916 434.0
DYD3_k127_5406631_7 nuclear chromosome segregation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002536 385.0
DYD3_k127_5406631_8 Domain of unknown function (DUF4215) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009582 368.0
DYD3_k127_5406631_9 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 333.0
DYD3_k127_5427183_0 Alginate biosynthesis protein AlgI - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000167 549.0
DYD3_k127_5427183_1 COG2755 Lysophospholipase L1 and related esterases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009373 438.0
DYD3_k127_5427183_2 GDSL-like Lipase/Acylhydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002543 299.0
DYD3_k127_5427183_3 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.0000000000000000000000000000000000000000000000003683 181.0
DYD3_k127_5439098_0 coenzyme F390 K01912 - 6.2.1.30 0.0 1034.0
DYD3_k127_5439098_1 DbpA RNA binding domain K03732,K05592 - 3.6.4.13 4.602e-196 627.0
DYD3_k127_5439098_10 Belongs to the FPP GGPP synthase family K00805,K02523 - 2.5.1.30,2.5.1.90 0.00000000000000000000000000000000000000000000000000000000000000009693 235.0
DYD3_k127_5439098_11 Domain of unknown function (DUF1732) - - - 0.00000000000000000000000000000000000000000000000000000000000003422 224.0
DYD3_k127_5439098_13 Protein of unknown function (DUF507) K09804 - - 0.0000000000000000000000000000000000000000000000002803 182.0
DYD3_k127_5439098_14 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.0000000000000000000000000000000000000000000000002995 180.0
DYD3_k127_5439098_16 methyltransferase - - - 0.0000000000000000000000000000000000000001718 158.0
DYD3_k127_5439098_17 Predicted membrane protein (DUF2079) K07778 - 2.7.13.3 0.000000000000000000000000000000000000000409 170.0
DYD3_k127_5439098_18 Cytochrome c K00406,K03889 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0040007,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.000000000000000000000000000000002715 135.0
DYD3_k127_5439098_2 sigma54 specific, transcriptional regulator, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007911 453.0
DYD3_k127_5439098_20 PFAM NAD dependent epimerase dehydratase family K01784 - 5.1.3.2 0.000000000000000000000000000001707 139.0
DYD3_k127_5439098_21 Belongs to the ompA family K03286 - - 0.0000000000000000000000001775 111.0
DYD3_k127_5439098_22 Polysaccharide biosynthesis protein - - - 0.00000000000000000002492 102.0
DYD3_k127_5439098_24 Protein of unknown function (DUF3570) - - - 0.0000000000001854 83.0
DYD3_k127_5439098_26 - - - - 0.00000000188 63.0
DYD3_k127_5439098_29 Pkd domain containing protein - - - 0.000009841 58.0
DYD3_k127_5439098_3 L,D-transpeptidase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 457.0
DYD3_k127_5439098_30 Domain of unknown function (DUF4266) - - - 0.0001065 48.0
DYD3_k127_5439098_31 SH3 type 3 - - - 0.0004736 51.0
DYD3_k127_5439098_32 transferase activity, transferring glycosyl groups - - - 0.0005039 52.0
DYD3_k127_5439098_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 441.0
DYD3_k127_5439098_5 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 442.0
DYD3_k127_5439098_6 pfkB family carbohydrate kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004994 369.0
DYD3_k127_5439098_7 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009159 314.0
DYD3_k127_5439098_8 Cytochrome C assembly protein K02195 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001719 257.0
DYD3_k127_5439098_9 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.000000000000000000000000000000000000000000000000000000000000000000005457 241.0
DYD3_k127_5456671_0 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007399 439.0
DYD3_k127_5456671_1 Lipopolysaccharide kinase (Kdo/WaaP) family K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002681 440.0
DYD3_k127_5456671_3 Tellurite resistance protein TerB K05801 - - 0.000000002825 65.0
DYD3_k127_5456671_4 RmuC family K09760 - - 0.0003717 49.0
DYD3_k127_5459221_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 574.0
DYD3_k127_5459221_1 adenosine deaminase K01488 - 3.5.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007499 537.0
DYD3_k127_5459221_10 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000001072 184.0
DYD3_k127_5459221_12 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.0000000000000000000000009319 119.0
DYD3_k127_5459221_13 dioxygenase activity - - - 0.000000003836 67.0
DYD3_k127_5459221_14 Cytochrome C oxidase, cbb3-type, subunit III K08738 - - 0.00000005386 62.0
DYD3_k127_5459221_2 FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007157 429.0
DYD3_k127_5459221_3 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003124 400.0
DYD3_k127_5459221_4 PFAM NAD dependent epimerase dehydratase family K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002694 338.0
DYD3_k127_5459221_5 DnaJ C terminal domain K03686,K05516 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001825 316.0
DYD3_k127_5459221_6 Glycosyl transferase family group 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003296 330.0
DYD3_k127_5459221_7 domain, Protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002829 302.0
DYD3_k127_5459221_8 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002063 282.0
DYD3_k127_5459221_9 Glycosyl transferase WecB/TagA/CpsF family K05946 - 2.4.1.187 0.000000000000000000000000000000000000000000000000000000000000000000000000009124 272.0
DYD3_k127_5494837_0 Cysteine-rich domain K00113 - 1.1.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002547 605.0
DYD3_k127_5494837_1 Type II secretion system (T2SS), protein F K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001809 529.0
DYD3_k127_5494837_10 cell redox homeostasis - - - 0.0000000000000000000000001253 116.0
DYD3_k127_5494837_2 His Kinase A (phosphoacceptor) domain K02668 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001917 407.0
DYD3_k127_5494837_4 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 374.0
DYD3_k127_5494837_5 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009843 306.0
DYD3_k127_5494837_6 Rubrerythrin - GO:0003674,GO:0005488,GO:0005506,GO:0043167,GO:0043169,GO:0046872,GO:0046914 - 0.00000000000000000000000000000000000000000000000000000000000000000000004359 245.0
DYD3_k127_5494837_8 Protein of unknown function (DUF3501) - - - 0.00000000000000000000000000000000000000000000000001473 199.0
DYD3_k127_5494837_9 ABC-type transport system involved in resistance to organic solvents auxiliary component K07323 - - 0.00000000000000000000000000000000007132 143.0
DYD3_k127_55026_0 Periplasmic protein TonB links inner and outer membranes - - - 1.321e-211 692.0
DYD3_k127_55026_1 Malic enzyme, NAD binding domain K00029 - 1.1.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005574 572.0
DYD3_k127_5511014_0 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.0 1191.0
DYD3_k127_5511014_1 Tetratricopeptide repeat - - - 0.0 1044.0
DYD3_k127_5511014_10 Modulates RecA activity K03565 - - 0.0000000000000000000000207 106.0
DYD3_k127_5511014_11 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.00000000000000000002488 99.0
DYD3_k127_5511014_12 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.000000000000000144 88.0
DYD3_k127_5511014_13 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000007863 85.0
DYD3_k127_5511014_14 - - - - 0.0000000001422 75.0
DYD3_k127_5511014_16 FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02417 GO:0006935,GO:0008150,GO:0009605,GO:0040011,GO:0042221,GO:0042330,GO:0044403,GO:0044419,GO:0050896,GO:0051701,GO:0051704,GO:0052116,GO:0052126,GO:0052127,GO:0052143,GO:0052192,GO:0052195,GO:0052216,GO:0052243 - 0.0000276 56.0
DYD3_k127_5511014_17 Glycogen debranching enzyme - - - 0.0002144 53.0
DYD3_k127_5511014_2 Polysaccharide biosynthesis protein K20534 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006212 385.0
DYD3_k127_5511014_3 ADP-ribosylation factor family K06883 GO:0008150,GO:0032879,GO:0032880,GO:0050789,GO:0065007 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002418 362.0
DYD3_k127_5511014_4 Roadblock/LC7 domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002423 291.0
DYD3_k127_5511014_5 Alpha-L-arabinofuranosidase B, catalytic - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000632 278.0
DYD3_k127_5511014_6 PFAM Transketolase, thiamine diphosphate binding domain K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001802 279.0
DYD3_k127_5511014_7 Transketolase, pyrimidine binding domain K00615 - 2.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000004796 230.0
DYD3_k127_5511014_8 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000003538 119.0
DYD3_k127_5511014_9 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000004284 124.0
DYD3_k127_5532362_0 Domain of unknown function (DUF4388) K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007505 463.0
DYD3_k127_5532362_1 Cellulose biosynthesis protein BcsQ K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000539 359.0
DYD3_k127_5532362_2 Sigma-70, region 4 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005784 303.0
DYD3_k127_5532362_3 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004549 272.0
DYD3_k127_5532362_4 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.0000000000000000000000000000000000000000000000000001545 200.0
DYD3_k127_5532362_5 MerR HTH family regulatory protein - - - 0.00000000000000000000000000000000000000000000000002904 184.0
DYD3_k127_5532362_6 - - - - 0.000000000000000000000000000008758 121.0
DYD3_k127_5563998_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 9.438e-247 769.0
DYD3_k127_5563998_1 ammonium transporter K03320 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004093 572.0
DYD3_k127_5563998_10 Methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007042 265.0
DYD3_k127_5563998_11 MarC family integral membrane protein K05595 - - 0.0000000000000000000000000000000000000000000000002268 188.0
DYD3_k127_5563998_12 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000003914 194.0
DYD3_k127_5563998_13 - - - - 0.0000000000000000000000000000000000000000000006095 176.0
DYD3_k127_5563998_14 response regulator receiver - - - 0.00000000000000000000000000000000000000000004074 179.0
DYD3_k127_5563998_15 oxidoreductase activity - - - 0.00000000000000000000000000000000000000000005155 182.0
DYD3_k127_5563998_2 DinB superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001527 480.0
DYD3_k127_5563998_3 of ABC-type glycine betaine transport system K05845,K05846 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003192 457.0
DYD3_k127_5563998_4 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009026 449.0
DYD3_k127_5563998_5 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008982 386.0
DYD3_k127_5563998_6 Protein kinase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002967 367.0
DYD3_k127_5563998_7 ABC transporter K05847 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001161 279.0
DYD3_k127_5563998_8 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001211 274.0
DYD3_k127_5563998_9 DNA-binding transcription factor activity K02521 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005008 272.0
DYD3_k127_5574559_0 Putative zinc binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003117 536.0
DYD3_k127_5574559_1 winged helix-turn-helix - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001442 517.0
DYD3_k127_5574559_10 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.00000001594 59.0
DYD3_k127_5574559_11 Stigma-specific protein, Stig1 - - - 0.00001078 58.0
DYD3_k127_5574559_2 PFAM NAD-dependent epimerase dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005404 433.0
DYD3_k127_5574559_3 COGs COG2148 Sugar transferase involved in lipopolysaccharide synthesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000211 429.0
DYD3_k127_5574559_4 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001056 275.0
DYD3_k127_5574559_5 GlcNAc-PI de-N-acetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002118 276.0
DYD3_k127_5574559_6 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K00067,K01790 - 1.1.1.133,5.1.3.13 0.0000000000000000000000000000000000000000000000000000000000003005 220.0
DYD3_k127_5574559_7 polysaccharide export K01991 - - 0.00000000000000000000000000000000000000004376 159.0
DYD3_k127_5574559_8 - - - - 0.000000000000000000000000000000000002208 149.0
DYD3_k127_5574559_9 interspecies interaction between organisms K18353 - - 0.000000000000000000003262 106.0
DYD3_k127_5576894_0 Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006249 360.0
DYD3_k127_5576894_1 Dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 356.0
DYD3_k127_5576894_2 Lysylphosphatidylglycerol synthase TM region - - - 0.00000000000000000000000000000000000000000000000000000000001191 220.0
DYD3_k127_5576894_3 Cytidylyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000007357 205.0
DYD3_k127_559002_0 Required for chromosome condensation and partitioning K03529 - - 0.0 1110.0
DYD3_k127_559002_1 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 6.731e-271 846.0
DYD3_k127_559002_11 Lamin Tail Domain K07004 - - 0.0000000000000000000000000000000004949 143.0
DYD3_k127_559002_12 protein conserved in bacteria - - - 0.000000000000000000008475 96.0
DYD3_k127_559002_15 Calcium ion binding - - - 0.00002869 56.0
DYD3_k127_559002_2 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K02337,K14162 GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000037 554.0
DYD3_k127_559002_3 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002891 521.0
DYD3_k127_559002_4 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 GO:0003674,GO:0003824,GO:0003866,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0071704,GO:1901576 2.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003342 441.0
DYD3_k127_559002_5 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001702 374.0
DYD3_k127_559002_6 Prephenate dehydratase K14170 - 4.2.1.51,5.4.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000004088 259.0
DYD3_k127_559002_7 Glycosyl hydrolase family 45 - GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000002034 243.0
DYD3_k127_559002_9 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.00000000000000000000000000000000000000000000000000000000001258 231.0
DYD3_k127_5604233_0 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006796 336.0
DYD3_k127_5604233_1 Protein of unknown function (DUF1592) - - - 0.0000000000000000000000000000000000000000000000000000000000009258 223.0
DYD3_k127_5604233_2 Protein of unknown function (DUF1552) - - - 0.0000000000000000000000000000000000000000001802 177.0
DYD3_k127_5604233_4 Belongs to the glycosyl hydrolase 2 family - - - 0.00000000000000006748 94.0
DYD3_k127_5604233_5 Belongs to the glycosyl hydrolase 43 family - - - 0.0000002934 63.0
DYD3_k127_5628018_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1045.0
DYD3_k127_5628018_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003506 511.0
DYD3_k127_5628018_2 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006621 303.0
DYD3_k127_5628018_3 Imidazoleglycerol-phosphate dehydratase K01693 GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003808 283.0
DYD3_k127_5628018_4 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000005385 267.0
DYD3_k127_5628018_5 PFAM Formylglycine-generating sulfatase enzyme K20333 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002565 278.0
DYD3_k127_5628018_6 - - - - 0.0000000000000000000000000000000000000000000000000000000005366 210.0
DYD3_k127_5628018_7 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.00000000000000000000000000000000000000000000000000000004368 209.0
DYD3_k127_5628018_8 lipolytic protein G-D-S-L family - - - 0.0000000000000000000000000000000000000000004709 177.0
DYD3_k127_5628018_9 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000000001797 148.0
DYD3_k127_564707_0 succinate dehydrogenase, flavoprotein subunit K00239 GO:0000104,GO:0000166,GO:0001539,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006091,GO:0006113,GO:0006928,GO:0006950,GO:0006974,GO:0006996,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016043,GO:0016491,GO:0016627,GO:0022607,GO:0022900,GO:0030030,GO:0030031,GO:0032991,GO:0033554,GO:0036094,GO:0040011,GO:0043167,GO:0043168,GO:0044085,GO:0044237,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0044780,GO:0044781,GO:0045273,GO:0045274,GO:0045283,GO:0045284,GO:0045333,GO:0048037,GO:0048870,GO:0050660,GO:0050662,GO:0050896,GO:0051179,GO:0051674,GO:0051716,GO:0055114,GO:0070469,GO:0070470,GO:0070925,GO:0071840,GO:0071944,GO:0071949,GO:0071973,GO:0097159,GO:0097588,GO:0098796,GO:0098797,GO:0098803,GO:1901265,GO:1901363 1.3.5.1,1.3.5.4 1.886e-206 650.0
DYD3_k127_564707_1 Cytochrome P450 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001999 331.0
DYD3_k127_564707_2 Protein kinase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002511 308.0
DYD3_k127_564707_3 transcriptional regulator K21900 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002421 274.0
DYD3_k127_564707_4 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006053 258.0
DYD3_k127_5679981_0 PFAM cytochrome bd ubiquinol oxidase subunit I K00425 - 1.10.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002878 485.0
DYD3_k127_5679981_1 Trypsin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002078 361.0
DYD3_k127_5679981_2 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001831 312.0
DYD3_k127_5679981_3 Diacylglycerol kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002657 317.0
DYD3_k127_5679981_4 oxidase, subunit K00426 - 1.10.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002415 304.0
DYD3_k127_5679981_5 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.000000000000000000000000000000000000007366 150.0
DYD3_k127_5679981_6 response regulator - - - 0.0000000000000000001033 98.0
DYD3_k127_5679981_7 Cupin superfamily (DUF985) K09705 - - 0.0000000000000001335 81.0
DYD3_k127_5679981_8 - - - - 0.000001182 55.0
DYD3_k127_5721223_0 Tetratricopeptide repeat - - - 0.0 1378.0
DYD3_k127_5721223_1 Tetratricopeptide repeat - - - 3.627e-240 762.0
DYD3_k127_5721223_2 adventurous gliding protein T - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 366.0
DYD3_k127_5721223_4 Histidine kinase - - - 0.000000000000000000000000000000000000000000000001829 184.0
DYD3_k127_5721223_5 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.0000000000000000000000000000000000000000000008968 174.0
DYD3_k127_5721223_7 HEAT repeats - - - 0.00000000000000000000000000000000000000007464 165.0
DYD3_k127_5721223_8 nuclease activity K07460 - - 0.000000000000000000000001023 114.0
DYD3_k127_5721223_9 adventurous gliding protein T - - - 0.00000000001207 69.0
DYD3_k127_5741887_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1504.0
DYD3_k127_5741887_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002391 265.0
DYD3_k127_5745853_0 Enoyl-(Acyl carrier protein) reductase K00208 - 1.3.1.10,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007353 407.0
DYD3_k127_5745853_1 Insulinase (Peptidase family M16) K07263 - - 0.0005502 47.0
DYD3_k127_5754660_0 homoserine kinase activity K02204 - 2.7.1.39 0.0 1245.0
DYD3_k127_5754660_1 Glycogen debranching enzyme N terminal - - - 7.491e-212 676.0
DYD3_k127_5754660_10 cytochrome oxidase assembly K02259 - - 0.0000000000000000000000000000000000000000000000000000000000000000246 238.0
DYD3_k127_5754660_12 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000000000000000000000000000000001316 183.0
DYD3_k127_5754660_13 Histidine kinase A domain protein - - - 0.000000000000000000000000000000000000001135 162.0
DYD3_k127_5754660_14 Domain of unknown function DUF302 - - - 0.000000000000000000000000000000905 128.0
DYD3_k127_5754660_2 Transcriptional regulator - - - 7.598e-205 654.0
DYD3_k127_5754660_3 Belongs to the xylose isomerase family K01805 - 5.3.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002636 602.0
DYD3_k127_5754660_4 Insulinase (Peptidase family M16) K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006208 404.0
DYD3_k127_5754660_5 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000196 404.0
DYD3_k127_5754660_6 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005772 350.0
DYD3_k127_5754660_7 PFAM Methyltransferase type - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002126 327.0
DYD3_k127_5754660_9 Insulinase (Peptidase family M16) K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000038 247.0
DYD3_k127_5755946_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001981 557.0
DYD3_k127_5755946_1 UbiA prenyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001867 323.0
DYD3_k127_5755946_2 FtsJ-like methyltransferase K06442 - 2.1.1.226,2.1.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000002 268.0
DYD3_k127_5755946_3 CAAX protease self-immunity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001761 269.0
DYD3_k127_5755946_4 PFAM Formylglycine-generating sulfatase enzyme K08884,K12132,K18912 - 1.14.99.50,2.7.11.1 0.00000000000000000000000000000000000000000000000000000000008416 214.0
DYD3_k127_5760618_0 heat shock protein 70 K04043 - - 9.744e-306 945.0
DYD3_k127_5760618_1 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 3.441e-215 680.0
DYD3_k127_5760618_10 - - - - 0.0000000000000000000000000002596 124.0
DYD3_k127_5760618_2 Peptidase family M1 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007482 577.0
DYD3_k127_5760618_3 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003064 359.0
DYD3_k127_5760618_4 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000467 365.0
DYD3_k127_5760618_5 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000192 336.0
DYD3_k127_5760618_6 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006222 261.0
DYD3_k127_5760618_7 DnaJ molecular chaperone homology domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001487 256.0
DYD3_k127_5760618_8 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000001368 229.0
DYD3_k127_5760618_9 - - - - 0.0000000000000000000000000000000000137 147.0
DYD3_k127_5766346_0 COG0488 ATPase components of ABC transporters with duplicated ATPase domains - - - 2.197e-249 780.0
DYD3_k127_5766346_1 Domain of unknown function (DUF4105) - - - 0.0000000000000000000000000000000000000000000000000000000000000005963 239.0
DYD3_k127_5766346_2 PA14 domain - - - 0.000000000000000000000000000000000000000000000000000000000000001153 237.0
DYD3_k127_5766346_3 radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000001116 213.0
DYD3_k127_5766346_4 PFAM MULE transposase, conserved domain - - - 0.00000005216 64.0
DYD3_k127_5781127_0 Belongs to the UPF0061 (SELO) family K08997 - - 4.535e-217 685.0
DYD3_k127_5781127_1 DNA-templated transcription, initiation K03088 GO:0000988,GO:0000990,GO:0002791,GO:0003674,GO:0006355,GO:0006950,GO:0008150,GO:0009266,GO:0009405,GO:0009408,GO:0009628,GO:0009889,GO:0010468,GO:0010556,GO:0010565,GO:0016987,GO:0019216,GO:0019217,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0032879,GO:0032880,GO:0043254,GO:0044087,GO:0044419,GO:0050708,GO:0050789,GO:0050794,GO:0050896,GO:0051046,GO:0051049,GO:0051128,GO:0051171,GO:0051223,GO:0051252,GO:0051704,GO:0060255,GO:0062012,GO:0065007,GO:0070201,GO:0080090,GO:0090087,GO:0140110,GO:1903506,GO:1903530,GO:2000112,GO:2000142,GO:2001141 - 0.0000000000000000000000000000000001961 149.0
DYD3_k127_5781127_2 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.000000000000000000000000000000001497 141.0
DYD3_k127_5781127_3 Tetratricopeptide repeat - - - 0.000002143 59.0
DYD3_k127_5789251_0 Psort location CytoplasmicMembrane, score 10.00 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 372.0
DYD3_k127_5789251_1 Toxic component of a toxin-antitoxin (TA) module K07171 - - 0.00000000000000000000007504 104.0
DYD3_k127_5789251_2 - - - - 0.000001652 59.0
DYD3_k127_5789251_3 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.0001975 48.0
DYD3_k127_5800567_0 ABC transporter - - - 0.0 1072.0
DYD3_k127_5800567_1 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455,K11747 - - 3.066e-251 799.0
DYD3_k127_5800567_2 DNA alkylation repair - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004981 372.0
DYD3_k127_5800567_3 transcriptional regulator - - - 0.0000000001331 68.0
DYD3_k127_5833975_1 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005507 520.0
DYD3_k127_5833975_10 Methionine biosynthesis protein MetW - - - 0.000000000000000000000000000000000000000000000004345 194.0
DYD3_k127_5833975_11 methyltransferase activity - - - 0.00000000000000000000000000000000106 139.0
DYD3_k127_5833975_12 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.00000000000000000000000000000001774 138.0
DYD3_k127_5833975_13 Predicted membrane protein (DUF2079) - - - 0.00000000000000001776 97.0
DYD3_k127_5833975_14 - - GO:0008150,GO:0040008,GO:0045927,GO:0048518,GO:0050789,GO:0065007 - 0.000000000000003143 79.0
DYD3_k127_5833975_15 - - - - 0.00000068 62.0
DYD3_k127_5833975_2 GDP-mannose 4,6 dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004775 404.0
DYD3_k127_5833975_3 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007512 347.0
DYD3_k127_5833975_4 SIS domain K03271 - 5.3.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003604 295.0
DYD3_k127_5833975_5 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003289 283.0
DYD3_k127_5833975_6 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000001411 242.0
DYD3_k127_5833975_7 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000004327 229.0
DYD3_k127_5833975_8 PIN domain - - - 0.00000000000000000000000000000000000000000000000000000005591 199.0
DYD3_k127_5880804_0 Cation transporting ATPase, C-terminus K01531 - 3.6.3.2 9.228e-266 844.0
DYD3_k127_5880804_1 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 5.063e-251 807.0
DYD3_k127_5880804_10 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000001951 106.0
DYD3_k127_5880804_11 mechanosensitive ion channel - - - 0.0000000008633 68.0
DYD3_k127_5880804_12 His Kinase A (phosphoacceptor) domain - - - 0.000000002355 63.0
DYD3_k127_5880804_2 Histidine kinase K07716 - 2.7.13.3 7.258e-214 688.0
DYD3_k127_5880804_3 Carbohydrate phosphorylase K00688 - 2.4.1.1 1.355e-197 639.0
DYD3_k127_5880804_4 (ABC) transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001803 436.0
DYD3_k127_5880804_5 Small-conductance mechanosensitive channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004152 294.0
DYD3_k127_5880804_6 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000001885 165.0
DYD3_k127_5880804_7 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 0.000000000000000000000000000000001047 140.0
DYD3_k127_5880804_8 PFAM MscS Mechanosensitive ion channel - - - 0.000000000000000000000000000003982 126.0
DYD3_k127_5880804_9 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.000000000000000000000005395 114.0
DYD3_k127_5892664_0 TIGRFAM chromate transporter, chromate ion transporter (CHR) family K07240 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006592 452.0
DYD3_k127_5892664_1 Chromate resistance exported protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005359 318.0
DYD3_k127_5892664_2 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 291.0
DYD3_k127_5892664_3 Phytanoyl-CoA dioxygenase (PhyH) - - - 0.00000000000000000000000000000000000000000000000000000000000000004693 236.0
DYD3_k127_5892664_4 NADH dehydrogenase, FAD-containing subunit K03885 - 1.6.99.3 0.000000000000000000000000000000000000000008824 167.0
DYD3_k127_5892664_5 - - - - 0.000000000000000000000000000000000000002457 156.0
DYD3_k127_5892664_6 cellulose 1,4-beta-cellobiosidase activity - - - 0.000000000000000000000000000000000001162 147.0
DYD3_k127_5892664_7 - - - - 0.000000000000000009478 86.0
DYD3_k127_5898941_0 PFAM aldo keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004181 345.0
DYD3_k127_5898941_1 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009672 283.0
DYD3_k127_5898941_2 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000007666 228.0
DYD3_k127_5898941_3 - - - - 0.0001653 55.0
DYD3_k127_5934793_0 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) - - - 4.688e-215 677.0
DYD3_k127_5934793_1 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000009126 253.0
DYD3_k127_5934793_2 Flagellar basal body rod FlgEFG protein C-terminal K02396 - - 0.00000000000000000000000000000000000000000000000000003071 203.0
DYD3_k127_5934793_3 Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end K02407 - - 0.0000000000000000000000000000000000001051 158.0
DYD3_k127_5934793_4 Belongs to the bacterial flagellin family K02397 - - 0.00000000000000000000002088 111.0
DYD3_k127_5934793_5 flagellar protein FliS K02422 - - 0.000000001291 64.0
DYD3_k127_5934793_6 A translational regulator that binds mRNA to regulate translation initiation and or mRNA stability. Usually binds in the 5'-UTR at or near the Shine-Dalgarno sequence preventing ribosome- binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW K03563 - - 0.0000005918 61.0
DYD3_k127_5939162_0 Multicopper oxidase K22348 - 1.16.3.3 1.36e-206 651.0
DYD3_k127_5939162_1 May be the GTPase, regulating ATP sulfurylase activity K00955 GO:0006790,GO:0008150,GO:0008152,GO:0009987,GO:0044237 2.7.1.25,2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004339 612.0
DYD3_k127_5939162_10 Binding-protein-dependent transport system inner membrane component K02025,K05814 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001233 304.0
DYD3_k127_5939162_11 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000002094 254.0
DYD3_k127_5939162_12 Outer membrane efflux protein K15725 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004069 261.0
DYD3_k127_5939162_13 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000003611 239.0
DYD3_k127_5939162_14 PFAM Bacterial extracellular solute-binding proteins, family 5 Middle K02035,K13893 - - 0.0000000000000000000000000000000000000000000000000000000000000000004056 253.0
DYD3_k127_5939162_15 binding-protein-dependent transport systems inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000038 249.0
DYD3_k127_5939162_16 PFAM Binding-protein-dependent transport system inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000005334 229.0
DYD3_k127_5939162_17 4-vinyl reductase, 4VR K06382,K07013 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000008601 209.0
DYD3_k127_5939162_18 - - - - 0.0000000000000000000000000000000000000000000001131 176.0
DYD3_k127_5939162_19 high-affinity sulfate:proton symporter activity K06203 GO:0000096,GO:0000097,GO:0000103,GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006082,GO:0006520,GO:0006534,GO:0006790,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0008150,GO:0008152,GO:0008271,GO:0008272,GO:0008324,GO:0008509,GO:0008512,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009675,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015103,GO:0015116,GO:0015291,GO:0015293,GO:0015294,GO:0015295,GO:0015296,GO:0015318,GO:0015672,GO:0015698,GO:0016020,GO:0016021,GO:0016053,GO:0019344,GO:0019752,GO:0022804,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0034220,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044425,GO:0044459,GO:0044464,GO:0046394,GO:0051179,GO:0051234,GO:0055085,GO:0071704,GO:0071944,GO:0072348,GO:0098655,GO:0098656,GO:0098660,GO:0098661,GO:0098662,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901682,GO:1902358,GO:1902600 - 0.0000000000000000000000000000000000000113 154.0
DYD3_k127_5939162_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009293 612.0
DYD3_k127_5939162_21 Uncharacterized conserved protein (DUF2277) - - - 0.00000000000000000000000000000006825 126.0
DYD3_k127_5939162_22 GDSL-like Lipase/Acylhydrolase family - - - 0.000000000000000000000000001048 126.0
DYD3_k127_5939162_23 serine threonine protein kinase K08884,K12132 GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018107,GO:0018193,GO:0018210,GO:0019216,GO:0019217,GO:0019222,GO:0019538,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0036211,GO:0042304,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046777,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:0140096,GO:1901564 2.7.11.1 0.00000000004039 73.0
DYD3_k127_5939162_24 - - - - 0.000005072 56.0
DYD3_k127_5939162_25 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 2.5.1.16 0.00001571 57.0
DYD3_k127_5939162_26 - - - - 0.0002259 52.0
DYD3_k127_5939162_3 FAD linked oxidases, C-terminal domain K00102,K00104 - 1.1.2.4,1.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006634 580.0
DYD3_k127_5939162_4 Phosphoadenosine phosphosulfate reductase family K00957 - 2.7.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006427 493.0
DYD3_k127_5939162_5 Bacterial extracellular solute-binding protein K02027,K05813 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002407 466.0
DYD3_k127_5939162_6 Belongs to the ABC transporter superfamily K02031,K15583 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002565 383.0
DYD3_k127_5939162_7 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005302 320.0
DYD3_k127_5939162_8 Calcineurin-like phosphoesterase K03651 - 3.1.4.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 299.0
DYD3_k127_5939162_9 Binding-protein-dependent transport system inner membrane component K05815 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003444 306.0
DYD3_k127_5943249_0 NMT1-like family K15576 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003862 611.0
DYD3_k127_5943249_1 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004799 434.0
DYD3_k127_5943249_2 BFD-like [2Fe-2S] binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 398.0
DYD3_k127_5943249_3 PFAM Binding-protein-dependent transport systems inner membrane component K15577 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009757 360.0
DYD3_k127_5943249_4 TIGRFAM Nitrate transport ATP-binding K15578 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001982 339.0
DYD3_k127_5943249_5 COG1116 ABC-type nitrate sulfonate K15579 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009566 326.0
DYD3_k127_5943249_6 transmembrane signaling receptor activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003597 259.0
DYD3_k127_5943249_7 nitric oxide dioxygenase activity - - - 0.000000000000000000000000000000000000000000000005393 176.0
DYD3_k127_5943249_8 Globin - - - 0.000000000000000000000000000000000004019 142.0
DYD3_k127_5943249_9 Alginate export - - - 0.00000000000109 80.0
DYD3_k127_5947206_0 NAD(P) transhydrogenase alpha subunit K00324 - 1.6.1.2 2.075e-204 651.0
DYD3_k127_5947206_1 NAD(P) transhydrogenase beta subunit K00325 - 1.6.1.2 7.952e-194 615.0
DYD3_k127_5947206_2 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000008555 194.0
DYD3_k127_5947206_4 Methyltransferase FkbM domain - - - 0.0000000000000000000000000000001147 138.0
DYD3_k127_5947206_5 Cupin superfamily (DUF985) K09705 - - 0.00000000000000000001865 98.0
DYD3_k127_5990939_0 Family membership K08884 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002894 282.0
DYD3_k127_5990939_1 UTP--glucose-1-phosphate uridylyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000048 261.0
DYD3_k127_5990939_2 Peptidase S46 - - - 0.00000000000000000000000000000000000000000000000000000000000006589 220.0
DYD3_k127_5990939_3 nitric oxide dioxygenase activity K05916,K06886 GO:0000041,GO:0000166,GO:0001505,GO:0003674,GO:0003824,GO:0004155,GO:0005488,GO:0005504,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006826,GO:0006873,GO:0006875,GO:0006879,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008289,GO:0008941,GO:0009056,GO:0009987,GO:0015669,GO:0015671,GO:0015893,GO:0016491,GO:0016645,GO:0016646,GO:0016667,GO:0016671,GO:0016705,GO:0016708,GO:0017144,GO:0019725,GO:0019825,GO:0020037,GO:0030001,GO:0030003,GO:0031406,GO:0032843,GO:0033293,GO:0033554,GO:0034641,GO:0036094,GO:0042133,GO:0042135,GO:0042221,GO:0042493,GO:0042592,GO:0042737,GO:0043167,GO:0043168,GO:0043177,GO:0044237,GO:0044248,GO:0044270,GO:0044424,GO:0044464,GO:0046209,GO:0046210,GO:0046906,GO:0046916,GO:0048037,GO:0048878,GO:0050660,GO:0050662,GO:0050801,GO:0050896,GO:0051179,GO:0051213,GO:0051234,GO:0051409,GO:0051716,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0055114,GO:0065007,GO:0065008,GO:0071500,GO:0071949,GO:0072593,GO:0097159,GO:0098771,GO:1901265,GO:1901363,GO:2001057 1.14.12.17 0.00000000000000000000000000000000002644 141.0
DYD3_k127_5990939_4 Cellulose biosynthesis protein BcsQ - - - 0.000000000000000000000000000002953 138.0
DYD3_k127_5994919_0 Type I restriction-modification system methyltransferase subunit K03427 - 2.1.1.72 1.813e-210 660.0
DYD3_k127_5994919_1 MlaD protein K02067 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003541 545.0
DYD3_k127_5994919_2 Cytochrome c554 and c-prime - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001983 495.0
DYD3_k127_5994919_3 Cysteine-rich secretory protein family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001226 279.0
DYD3_k127_5994919_4 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000005771 275.0
DYD3_k127_6005988_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 7.028e-195 623.0
DYD3_k127_6005988_1 Sugar (and other) transporter K08178 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000251 489.0
DYD3_k127_6005988_10 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004468 272.0
DYD3_k127_6005988_11 with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine K01658,K01664 - 2.6.1.85,4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000002873 266.0
DYD3_k127_6005988_12 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000003976 254.0
DYD3_k127_6005988_13 Transporter associated domain K03699 - - 0.0000000000000000000000000000000000000000000000000000000000003433 229.0
DYD3_k127_6005988_14 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000002605 227.0
DYD3_k127_6005988_15 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.00000000000000000000000000000000000000000000000000000003516 222.0
DYD3_k127_6005988_16 alpha beta - - - 0.00000000000000000000000000000000000000000000000001089 192.0
DYD3_k127_6005988_17 Belongs to the TrpC family K01609 GO:0000162,GO:0000287,GO:0003674,GO:0003824,GO:0004425,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016020,GO:0016053,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0030312,GO:0034641,GO:0040007,GO:0042401,GO:0042430,GO:0042435,GO:0043167,GO:0043169,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046219,GO:0046391,GO:0046394,GO:0046483,GO:0046872,GO:0071704,GO:0071944,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.1.1.48 0.000000000000000000000000000000000000000005563 166.0
DYD3_k127_6005988_18 PAS fold - - - 0.000000000000000000000000000000000000002006 169.0
DYD3_k127_6005988_19 Acetyltransferase (GNAT) family - - - 0.000000000000000000000000000000000001471 149.0
DYD3_k127_6005988_2 NAD dependent epimerase/dehydratase family K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006567 437.0
DYD3_k127_6005988_20 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000007572 148.0
DYD3_k127_6005988_22 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00000000000001158 77.0
DYD3_k127_6005988_23 Universal stress protein A-like protein - - - 0.000000000000185 82.0
DYD3_k127_6005988_24 - - - - 0.000000000000614 72.0
DYD3_k127_6005988_25 UDP-glucuronate 4-epimerase K08679 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005794,GO:0005802,GO:0005975,GO:0005996,GO:0006063,GO:0006082,GO:0006950,GO:0006952,GO:0008150,GO:0008152,GO:0009058,GO:0009605,GO:0009607,GO:0009617,GO:0009620,GO:0009987,GO:0012505,GO:0016051,GO:0016053,GO:0019586,GO:0019752,GO:0031410,GO:0031982,GO:0031984,GO:0032787,GO:0033481,GO:0042742,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0046364,GO:0046394,GO:0050829,GO:0050832,GO:0050896,GO:0051704,GO:0051707,GO:0071704,GO:0072330,GO:0097708,GO:0098542,GO:0098791,GO:1901576 5.1.3.6 0.000000002566 59.0
DYD3_k127_6005988_26 - - - - 0.0001807 53.0
DYD3_k127_6005988_3 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.8.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005679 399.0
DYD3_k127_6005988_4 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002216 387.0
DYD3_k127_6005988_5 Phosphate acyltransferases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 402.0
DYD3_k127_6005988_6 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000371 338.0
DYD3_k127_6005988_7 polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000394 332.0
DYD3_k127_6005988_8 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007857 292.0
DYD3_k127_6005988_9 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001341 289.0
DYD3_k127_6018833_0 Surface antigen - - - 5.75e-248 812.0
DYD3_k127_6018833_1 Phosphodiester glycosidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000236 449.0
DYD3_k127_6018833_2 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006882 312.0
DYD3_k127_6018833_3 Pectate lyase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001662 296.0
DYD3_k127_6018833_4 Methyltransferase type 11 K07755 - 2.1.1.137 0.000000000000000000000000000000000000000000000000000000000000000000000000006122 255.0
DYD3_k127_6018833_5 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.000000000000000000000000000000000000000000000000000000003243 209.0
DYD3_k127_6018833_6 serine-type endopeptidase activity K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000028 207.0
DYD3_k127_6018833_7 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000000008609 203.0
DYD3_k127_6018833_8 Protein of unknown function DUF45 - - - 0.000000000000000000004837 100.0
DYD3_k127_6051771_0 alpha-N-arabinofuranosidase K01209 - 3.2.1.55 8.796e-212 668.0
DYD3_k127_6051771_1 Also exhibits in vitro acyl transferase activity, transferring the acyl moiety of short-chain amides to hydroxylamine to form hydroxamates K01455 GO:0003674,GO:0003824,GO:0004040,GO:0016787,GO:0016810,GO:0016811 3.5.1.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 547.0
DYD3_k127_6051771_10 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000000000000000000000000001077 218.0
DYD3_k127_6051771_11 - - - - 0.0000000000000000000000000000000000000000000000000000000001253 214.0
DYD3_k127_6051771_12 glutathione transferase activity - - - 0.00000000000000000000000000000000000000000000000000008714 194.0
DYD3_k127_6051771_13 Uncharacterized protein conserved in bacteria (DUF2184) - - - 0.00000000000000000000000000000000000000000000000000805 198.0
DYD3_k127_6051771_14 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000000000000000000000000000000000000001632 163.0
DYD3_k127_6051771_15 Belongs to the ompA family K03640 - - 0.000000000000000000000000000000000007769 142.0
DYD3_k127_6051771_16 glutathione transferase activity K00799,K04097 - 2.5.1.18,5.3.99.2 0.0000000000000000000000000000001473 136.0
DYD3_k127_6051771_17 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.00000000000000000000000000008168 123.0
DYD3_k127_6051771_18 Protein of unknown function (DUF433) - - - 0.00000000000000000000000001078 111.0
DYD3_k127_6051771_19 TfoX N-terminal domain - - - 0.0000000000000000000000001463 113.0
DYD3_k127_6051771_2 Trehalase K01194 - 3.2.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004445 446.0
DYD3_k127_6051771_20 PFAM Formylglycine-generating sulfatase enzyme - - - 0.000000000000000000000007984 113.0
DYD3_k127_6051771_22 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.00000000000000000003441 96.0
DYD3_k127_6051771_23 toxin-antitoxin pair type II binding - - - 0.0000000000000168 76.0
DYD3_k127_6051771_24 DNA integration - - - 0.00000000000007322 76.0
DYD3_k127_6051771_27 - - - - 0.00000002763 65.0
DYD3_k127_6051771_28 Bacterial regulatory proteins, tetR family - - - 0.00000583 57.0
DYD3_k127_6051771_3 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K03309 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007501 391.0
DYD3_k127_6051771_30 - - - - 0.0001349 53.0
DYD3_k127_6051771_4 cell volume homeostasis K03316,K11105 GO:0003674,GO:0005215,GO:0005451,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0006884,GO:0008150,GO:0008324,GO:0008361,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015079,GO:0015291,GO:0015297,GO:0015298,GO:0015299,GO:0015318,GO:0015386,GO:0015491,GO:0015672,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022804,GO:0022821,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0031226,GO:0032535,GO:0034220,GO:0042592,GO:0044425,GO:0044459,GO:0044464,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0065007,GO:0065008,GO:0071804,GO:0071805,GO:0071840,GO:0071944,GO:0090066,GO:0098655,GO:0098660,GO:0098662,GO:0099516,GO:1902600 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002656 383.0
DYD3_k127_6051771_5 PFAM MscS Mechanosensitive ion channel K16052 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 340.0
DYD3_k127_6051771_6 Mycolic acid cyclopropane synthetase K00574,K20238 - 2.1.1.317,2.1.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004003 329.0
DYD3_k127_6051771_7 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000951 333.0
DYD3_k127_6051771_8 NmrA-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007028 282.0
DYD3_k127_6051771_9 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002701 269.0
DYD3_k127_6064789_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1359.0
DYD3_k127_6064789_1 tagaturonate epimerase - - - 1.514e-244 771.0
DYD3_k127_6064789_2 pfkB family carbohydrate kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005663 589.0
DYD3_k127_6064789_3 Domain of unknown function (DUF2088) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000157 463.0
DYD3_k127_6064789_4 Transcriptional regulator sugar kinase K00886 - 2.7.1.63 0.0000000000000000000000000000000000000000000000000000000000000000000000000009148 264.0
DYD3_k127_6064789_5 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000001911 206.0
DYD3_k127_6064789_6 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.0000000000000000000000000000004474 128.0
DYD3_k127_6064789_7 2OG-Fe(II) oxygenase superfamily - - - 0.0000000000000000000000006148 112.0
DYD3_k127_6064789_8 protein heterodimerization activity - - - 0.00000000000000811 79.0
DYD3_k127_6068715_0 A circularly permuted ATPgrasp - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006259 591.0
DYD3_k127_6068715_1 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 309.0
DYD3_k127_6068715_2 N-acetylglucosaminylinositol deacetylase activity K01463 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000281 269.0
DYD3_k127_6068715_4 transglutaminase-like - - - 0.00000000000000000000000000000000000000000000000000000002093 213.0
DYD3_k127_6068715_5 A predicted alpha-helical domain with a conserved ER motif. - - - 0.0000000000000000000000000000000000000000000001208 180.0
DYD3_k127_6068715_7 Bor protein - - - 0.000000000000004286 78.0
DYD3_k127_6069474_0 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002525 366.0
DYD3_k127_6069474_1 PFAM NAD dependent epimerase dehydratase family K07071 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002243 263.0
DYD3_k127_6069474_2 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.000000000000000000000000000000000000000196 152.0
DYD3_k127_6069474_5 Helix-turn-helix domain - - - 0.000000000001086 70.0
DYD3_k127_6075705_0 Di-haem oxidoreductase, putative peroxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001844 520.0
DYD3_k127_6075705_1 Belongs to the class-II aminoacyl-tRNA synthetase family K01880 GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006426,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046983,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003344 498.0
DYD3_k127_6075705_2 Imelysin K07231 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003805 368.0
DYD3_k127_6075705_3 Horizontally Transferred TransMembrane Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000338 302.0
DYD3_k127_6075705_4 Imelysin K07338 - - 0.000000000000000000000000000000000000000000001627 182.0
DYD3_k127_6084793_0 Maltogenic Amylase, C-terminal domain K05343 - 3.2.1.1,5.4.99.16 0.0 1273.0
DYD3_k127_6084793_1 Aldo Keto reductase K13315 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002932 464.0
DYD3_k127_6084793_10 ATPase-coupled phosphate ion transmembrane transporter activity K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003602 361.0
DYD3_k127_6084793_11 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007788 338.0
DYD3_k127_6084793_12 enterobactin catabolic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006323 326.0
DYD3_k127_6084793_13 TIGRFAM phosphate binding protein K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003885 323.0
DYD3_k127_6084793_14 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000002929 242.0
DYD3_k127_6084793_15 Protein of unknown function (DUF1552) - - - 0.000000000000000000000000000000000000000000000000000000000000001405 237.0
DYD3_k127_6084793_16 Family membership K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000002583 229.0
DYD3_k127_6084793_17 methyltransferase - - - 0.0000000000000000000000000000000000000000001664 178.0
DYD3_k127_6084793_18 negative regulation of phosphate transmembrane transport K01104,K02039,K03741 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009892,GO:0010563,GO:0010966,GO:0019220,GO:0019222,GO:0031323,GO:0031324,GO:0032879,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0042802,GO:0042803,GO:0043269,GO:0043271,GO:0044070,GO:0044424,GO:0044464,GO:0045936,GO:0046983,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051049,GO:0051051,GO:0051174,GO:0065007,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 1.20.4.1,3.1.3.48 0.00000000000000000000000000000001508 141.0
DYD3_k127_6084793_19 Putative transmembrane protein (PGPGW) - - - 0.0000000000000000000000000006811 119.0
DYD3_k127_6084793_2 Periplasmic protein TonB links inner and outer membranes - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001891 481.0
DYD3_k127_6084793_20 - - - - 0.0000000000000000000000001221 120.0
DYD3_k127_6084793_21 - - - - 0.0000000000000002456 93.0
DYD3_k127_6084793_23 Predicted membrane protein (DUF2079) - - - 0.0000000000001669 84.0
DYD3_k127_6084793_24 NmrA-like family K01784 - 5.1.3.2 0.000004127 48.0
DYD3_k127_6084793_25 MotA/TolQ/ExbB proton channel family K03561 - - 0.00002978 52.0
DYD3_k127_6084793_3 PFAM H transporting two-sector ATPase alpha beta subunit central region K02412,K03224 - 3.6.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 458.0
DYD3_k127_6084793_4 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001423 449.0
DYD3_k127_6084793_5 TIGRFAM phosphate ABC transporter, inner membrane subunit PstA K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 434.0
DYD3_k127_6084793_6 TIGRFAM phosphate ABC transporter, inner membrane subunit PstC K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 429.0
DYD3_k127_6084793_7 Protein of unknown function (DUF1587) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002763 396.0
DYD3_k127_6084793_8 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 382.0
DYD3_k127_6084793_9 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004014 373.0
DYD3_k127_6087008_0 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07497 - - 4.331e-202 635.0
DYD3_k127_6087008_1 Glycosyl Hydrolase Family 88 K18581 - 3.2.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002702 386.0
DYD3_k127_6087008_10 cyclic nucleotide binding K10914 GO:0000166,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0005515,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0017076,GO:0019219,GO:0019222,GO:0030551,GO:0030552,GO:0030554,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032553,GO:0032555,GO:0032559,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0046983,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0097367,GO:0140110,GO:1901265,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 - 0.00000000000000000000001251 109.0
DYD3_k127_6087008_11 Domain in cystathionine beta-synthase and other proteins. K00974,K03281 - 2.7.7.72 0.00000000000000000005662 98.0
DYD3_k127_6087008_12 Ribosome-binding factor A K02834 - - 0.00000004711 61.0
DYD3_k127_6087008_13 hydrolase K01048 - 3.1.1.5 0.00006045 46.0
DYD3_k127_6087008_14 Helix-turn-helix XRE-family like proteins K07334,K21498 - - 0.0001065 50.0
DYD3_k127_6087008_2 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001545 336.0
DYD3_k127_6087008_3 unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008826 333.0
DYD3_k127_6087008_4 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004142 254.0
DYD3_k127_6087008_5 SMART Elongator protein 3 MiaB NifB - - - 0.000000000000000000000000000000000000000000000000000000003547 222.0
DYD3_k127_6087008_6 Helix-turn-helix domain - - - 0.0000000000000000000000000000000000000000000000000002241 188.0
DYD3_k127_6087008_7 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000000000000000000000000000000000000000000003131 188.0
DYD3_k127_6087008_8 Oxidoreductase - - - 0.000000000000000000000000000000000000438 157.0
DYD3_k127_6087008_9 Glycoprotease family K01409,K14742 - 2.3.1.234 0.000000000000000000000000003091 120.0
DYD3_k127_6112811_0 Chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB K04044 - - 2.373e-251 790.0
DYD3_k127_6112811_1 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 4.04e-202 638.0
DYD3_k127_6112811_10 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003039 263.0
DYD3_k127_6112811_11 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0006807,GO:0006873,GO:0006875,GO:0006879,GO:0008150,GO:0008152,GO:0008198,GO:0009987,GO:0010467,GO:0016043,GO:0016226,GO:0016740,GO:0016782,GO:0019538,GO:0019725,GO:0022607,GO:0030003,GO:0031163,GO:0036455,GO:0042592,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0046916,GO:0048037,GO:0048878,GO:0050801,GO:0051186,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0051604,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0071704,GO:0071840,GO:0097428,GO:0098771,GO:1901564 - 0.000000000000000000000000000000000000000000000000000000000000001078 221.0
DYD3_k127_6112811_12 Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA K04082 - - 0.00000000000000000000000000000000000000001468 160.0
DYD3_k127_6112811_13 Belongs to the HesB IscA family K13628 - - 0.0000000000000000000000000000000000000000305 160.0
DYD3_k127_6112811_14 MerR, DNA binding K19591 - - 0.000000000000000000000000000000000000001287 154.0
DYD3_k127_6112811_15 Zincin-like metallopeptidase K00930 - 2.7.2.8 0.0000000000000000000000000000000000000195 153.0
DYD3_k127_6112811_16 2Fe-2S iron-sulfur cluster binding domain K04755 - - 0.00000000000000000000000000000000000003604 150.0
DYD3_k127_6112811_17 Domain of unknown function (DUF4215) - - - 0.000000000000000000000000001357 117.0
DYD3_k127_6112811_18 Tyrosine phosphatase family K01104 - 3.1.3.48 0.000000000000000000000002033 113.0
DYD3_k127_6112811_19 RNA-binding protein - - - 0.000000000000000000000005396 106.0
DYD3_k127_6112811_2 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003237 522.0
DYD3_k127_6112811_20 Preprotein translocase SecG subunit K03075 - - 0.00000000000000001094 87.0
DYD3_k127_6112811_21 - - - - 0.000003836 57.0
DYD3_k127_6112811_3 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009059 484.0
DYD3_k127_6112811_4 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002786 466.0
DYD3_k127_6112811_5 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962,K01963 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002409 457.0
DYD3_k127_6112811_6 Membrane protein, TerC K05794 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001619 385.0
DYD3_k127_6112811_7 Transcriptional regulator K03717 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007671 354.0
DYD3_k127_6112811_8 PFAM metallophosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005474 311.0
DYD3_k127_6112811_9 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005617 300.0
DYD3_k127_6128072_0 TonB-dependent Receptor Plug Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002481 590.0
DYD3_k127_6128072_1 Regulator of chromosome condensation (RCC1) repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001531 361.0
DYD3_k127_6128072_2 PA14 - - - 0.000004384 54.0
DYD3_k127_6131757_0 Two component, sigma54 specific, transcriptional regulator, Fis family K07712 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004286 561.0
DYD3_k127_6131757_1 PFAM Formylglycine-generating sulfatase enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 339.0
DYD3_k127_6131757_2 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000001306 147.0
DYD3_k127_6147267_0 Alginate lyase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005545 553.0
DYD3_k127_6147267_1 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833 - 2.6.1.62 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004838 524.0
DYD3_k127_6147267_10 Putative antitoxin - - - 0.000000000000003003 78.0
DYD3_k127_6147267_11 HipA-like C-terminal domain K07154 - 2.7.11.1 0.000000000004342 71.0
DYD3_k127_6147267_12 Putative transposase, YhgA-like - - - 0.00000003367 59.0
DYD3_k127_6147267_2 Domain of unknown function (DUF4105) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005245 529.0
DYD3_k127_6147267_3 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000031 414.0
DYD3_k127_6147267_4 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001221 280.0
DYD3_k127_6147267_5 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001577 245.0
DYD3_k127_6147267_6 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000001288 190.0
DYD3_k127_6147267_7 Endoribonuclease L-PSP K09022 - 3.5.99.10 0.000000000000000000000000000000000000004011 151.0
DYD3_k127_6147267_8 Protein of unknown function (DUF3015) - - - 0.000000000000000000000000000000000003928 145.0
DYD3_k127_6147267_9 PIN domain K18828 - - 0.000000000000000000000002978 109.0
DYD3_k127_6171580_0 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005651 339.0
DYD3_k127_6171580_1 Cellulase (glycosyl hydrolase family 5) K01179 - 3.2.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008918 322.0
DYD3_k127_6171580_2 3-oxo-5-alpha-steroid 4-dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000003082 223.0
DYD3_k127_6171580_3 cobalamin binding K03496,K22491 - - 0.00000000000000000000000000000000000000000000000000000000002397 216.0
DYD3_k127_6171580_4 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain - - - 0.00000000000000000001257 95.0
DYD3_k127_6173753_0 HAMP domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004901 461.0
DYD3_k127_6173753_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001195 250.0
DYD3_k127_6173753_2 domain, Protein - - - 0.000000000000000000000000000000000001082 152.0
DYD3_k127_6173753_3 chlorophyll binding - - - 0.00000000000000000000000003338 117.0
DYD3_k127_6173753_5 membrane K06377 - - 0.00000000000000000005042 98.0
DYD3_k127_617453_0 Peptide-N-glycosidase F, N terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003177 467.0
DYD3_k127_617453_1 Protein of unknown function (DUF1592) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004059 376.0
DYD3_k127_617453_3 Protein of unknown function (DUF1592) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007897 302.0
DYD3_k127_617453_4 Protein of unknown function (DUF1552) - - - 0.000000000000000000184 103.0
DYD3_k127_617453_5 Transposase - - - 0.00000000004276 76.0
DYD3_k127_6174880_0 Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate K01815 - 5.3.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001353 404.0
DYD3_k127_6174880_1 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004558 355.0
DYD3_k127_6174880_10 Biopolymer transport protein ExbD/TolR K03559 - - 0.0000000000000000005727 94.0
DYD3_k127_6174880_12 Peptidase C14 caspase catalytic subunit p20 - - - 0.0000000000000007472 92.0
DYD3_k127_6174880_13 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.000000000000007562 85.0
DYD3_k127_6174880_14 PFAM membrane protein involved in aromatic hydrocarbon degradation K06076 - - 0.000000002604 70.0
DYD3_k127_6174880_2 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000002884 230.0
DYD3_k127_6174880_3 protein conserved in cyanobacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000001706 228.0
DYD3_k127_6174880_4 Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000001562 228.0
DYD3_k127_6174880_5 - - - - 0.0000000000000000000000000000000000000000000000000002388 194.0
DYD3_k127_6174880_6 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.00000000000000000000000000000000000000000000003053 183.0
DYD3_k127_6174880_7 MotA/TolQ/ExbB proton channel family K03561 - - 0.0000000000000000000000000000000000000000005835 167.0
DYD3_k127_6174880_9 TRAP transporter T-component - - - 0.00000000000000000000000000002363 131.0
DYD3_k127_6188674_0 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001559 461.0
DYD3_k127_6188674_1 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000345 377.0
DYD3_k127_6188674_2 Arabinogalactan endo-beta-1,4-galactanase K01224 - 3.2.1.89 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007915 353.0
DYD3_k127_6188674_3 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. - - - 0.0000000000000000000000000000000000000000000000000000000000000008676 235.0
DYD3_k127_6188674_4 addiction module antidote protein HigA K07110,K21686 - - 0.0000000000000000000000000000000000000000000001314 182.0
DYD3_k127_6188674_5 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000001309 153.0
DYD3_k127_6188674_6 YXWGXW repeat (2 copies) - - - 0.000004593 55.0
DYD3_k127_6192512_0 Histidine kinase-like ATPases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005223 292.0
DYD3_k127_6192512_1 COG2771 DNA-binding HTH domain-containing proteins - - - 0.00000000000000000000000000000000000000000000000000000000006306 211.0
DYD3_k127_6192512_2 Domain of unknown function (DUF3520) K07114 - - 0.0000000000000000000000000000000000000000000000000000000009387 214.0
DYD3_k127_6192512_3 - - - - 0.000000000000000000000000000000000000000000000000000000001911 207.0
DYD3_k127_6192512_4 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.0000000000000000000000000000000000000000005723 169.0
DYD3_k127_6192512_5 Glyoxalase-like domain K01759 - 4.4.1.5 0.000000000000000000000000000000008662 142.0
DYD3_k127_6192512_6 nitric oxide dioxygenase activity K17247 - - 0.0000000000000000000000000003075 124.0
DYD3_k127_6192512_7 lactoylglutathione lyase activity K01759 - 4.4.1.5 0.000000000000000171 83.0
DYD3_k127_6192512_8 Chondroitinase B K01729 - 4.2.2.3 0.00000009435 64.0
DYD3_k127_6199022_0 DNA polymerase K02337,K14162 - 2.7.7.7 0.0 1385.0
DYD3_k127_6199022_1 Glycosyl transferase K00702 - 2.4.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005403 587.0
DYD3_k127_6199022_11 Glycosyl hydrolase family 9 K01179 - 3.2.1.4 0.00000000000000000000000000000000000000000000000006325 190.0
DYD3_k127_6199022_12 - - - - 0.00000000000000000000000001948 121.0
DYD3_k127_6199022_13 repeat protein - - - 0.0000000000000000000000005009 122.0
DYD3_k127_6199022_16 - - - - 0.0000000000000000215 94.0
DYD3_k127_6199022_2 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006493 552.0
DYD3_k127_6199022_3 ABC transporter K10112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000393 431.0
DYD3_k127_6199022_4 Domain of unknown function (DUF4388) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 400.0
DYD3_k127_6199022_5 protein kinase activity K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005019 376.0
DYD3_k127_6199022_6 Galactokinase galactose-binding signature K00849 - 2.7.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005349 346.0
DYD3_k127_6199022_7 carbohydrate transport K17234 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001185 262.0
DYD3_k127_6199022_8 transmembrane transport K02025,K10118,K15771,K17235,K17245 - - 0.00000000000000000000000000000000000000000000000000000000000000001781 237.0
DYD3_k127_6199022_9 Binding-protein-dependent transport system inner membrane component K02026 - - 0.000000000000000000000000000000000000000000000000001188 205.0
DYD3_k127_621349_0 signal peptide peptidase SppA, 36K type K04773 - - 6.164e-218 704.0
DYD3_k127_621349_1 UTP--glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.00000000000000000000000000000000000000000000000000000000000000000001577 238.0
DYD3_k127_621349_2 ATPase activity K01990 - - 0.00000000000000002818 93.0
DYD3_k127_621349_3 nucleic acid-binding protein contains PIN domain K18828 - - 0.00000000001467 71.0
DYD3_k127_6221865_0 PFAM outer membrane efflux protein K15725 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006033 501.0
DYD3_k127_6221865_1 Peptidase family S49 K04773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004665 505.0
DYD3_k127_6221865_10 Phosphoglycerate mutase family K08296 - - 0.00000000000000000000000000000000006783 140.0
DYD3_k127_6221865_12 Bacterial regulatory proteins, tetR family - - - 0.0000009869 57.0
DYD3_k127_6221865_2 Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde K01620 - 4.1.2.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 472.0
DYD3_k127_6221865_3 GHKL domain K07641 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002036 448.0
DYD3_k127_6221865_4 Transcriptional regulatory protein, C terminal K07663,K07664 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006118 314.0
DYD3_k127_6221865_5 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002872 288.0
DYD3_k127_6221865_6 zinc-ribbon domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001154 303.0
DYD3_k127_6221865_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K15727 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002558 291.0
DYD3_k127_6221865_8 Stringent starvation protein B K03600 - - 0.0000000000000000000000000000000000000000003846 168.0
DYD3_k127_6221865_9 Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate K03785 - 4.2.1.10 0.00000000000000000000000000000000006546 145.0
DYD3_k127_6225552_1 Domain of unknown function (DUF4215) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003562 483.0
DYD3_k127_6225552_3 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000001612 246.0
DYD3_k127_6225552_4 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.0000000000000000000000000000000000000000000000000000000003631 216.0
DYD3_k127_6225552_5 Belongs to the peptidase S1B family K01318 - 3.4.21.19 0.0000000000000000000000000000000000000000002459 175.0
DYD3_k127_6225552_6 - - - - 0.000000000000000000000000002071 114.0
DYD3_k127_6225552_7 Leucine-rich repeats, outliers - - - 0.00000000008106 74.0
DYD3_k127_6225552_8 PFAM Pentapeptide repeats (8 copies) - - - 0.00000000008232 73.0
DYD3_k127_6233222_0 Tetratricopeptide repeat - - - 0.0 1347.0
DYD3_k127_6233222_1 GDP-mannose 4,6 dehydratase K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001554 374.0
DYD3_k127_6233222_2 Acyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004182 360.0
DYD3_k127_6233222_3 LD-carboxypeptidase K01297 - 3.4.17.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000007537 271.0
DYD3_k127_6253570_0 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K06147 - - 2.769e-262 825.0
DYD3_k127_6253570_1 Family membership K08884 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 351.0
DYD3_k127_6253570_2 Nitroreductase family - - - 0.000000000000000000000000000000000000000000007139 185.0
DYD3_k127_6253570_3 pseudouridine synthase activity K06178,K06183,K07058 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0040007,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.19,5.4.99.22 0.0000000000000000000000000000000006331 144.0
DYD3_k127_6253570_4 Nitroreductase family - - - 0.0000000002067 74.0
DYD3_k127_6253570_5 Periplasmic copper-binding protein (NosD) - - - 0.0005903 52.0
DYD3_k127_6272056_0 - - - - 3.308e-234 767.0
DYD3_k127_6272056_1 Lipase maturation factor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001546 568.0
DYD3_k127_6272056_2 associated with various cellular activities - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 499.0
DYD3_k127_6272056_3 VWA domain containing CoxE-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002154 487.0
DYD3_k127_6272056_4 Pentapeptide repeats (9 copies) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003053 389.0
DYD3_k127_6272056_5 - - - - 0.00000000000000000000000000000000000000000000000000000774 207.0
DYD3_k127_6272056_7 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain - - - 0.0000000000005406 72.0
DYD3_k127_6282932_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 2.356e-308 977.0
DYD3_k127_6282932_1 Belongs to the GppA Ppx family K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009059 542.0
DYD3_k127_6282932_2 Belongs to the radical SAM superfamily. RlmN family K06941 - 2.1.1.192 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 353.0
DYD3_k127_6282932_4 xylan catabolic process K01181,K07004 GO:0005575,GO:0005576 3.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002229 338.0
DYD3_k127_6282932_5 PFAM Ion transport protein K10716 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003462 322.0
DYD3_k127_6282932_6 PFAM Formylglycine-generating sulfatase enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001425 288.0
DYD3_k127_6282932_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004492 277.0
DYD3_k127_6282932_8 glucose sorbosone - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003984 255.0
DYD3_k127_6282932_9 - - - - 0.00000000000000000000000000000000000000000000000000000001343 209.0
DYD3_k127_6343621_0 Cation transporter/ATPase, N-terminus K01539 - 3.6.3.9 3.249e-239 771.0
DYD3_k127_6343621_1 OmpA family K02557 - - 0.000000000000000000000000000000000000000000000000000000000000000000000467 252.0
DYD3_k127_6343621_2 Serine Threonine protein kinase K08884,K12132 - 2.7.11.1 0.000000000000000000000000000008037 130.0
DYD3_k127_6343621_3 Domain of unknown function (DUF3817) - - - 0.000000000000000000000000001002 115.0
DYD3_k127_6343621_5 Cupin - - - 0.000000000000000001479 96.0
DYD3_k127_6343621_6 Cytochrome C oxidase, cbb3-type, subunit III K08738 - - 0.00001281 55.0
DYD3_k127_6351482_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003014 441.0
DYD3_k127_6351482_1 riboflavin synthase, alpha subunit K00793 - 2.5.1.9 0.00000000000000000000000000000000000000000000000000000002146 203.0
DYD3_k127_6351482_2 Endonuclease Exonuclease Phosphatase - - - 0.0000000000000000000000000007117 129.0
DYD3_k127_6351482_3 5'-nucleotidase, C-terminal domain K01081 - 3.1.3.5 0.00003692 49.0
DYD3_k127_6351482_4 Acid phosphatase homologues - - - 0.00008356 55.0
DYD3_k127_6353014_0 ATP-dependent helicase HrpB K03579 - 3.6.4.13 4.358e-250 800.0
DYD3_k127_6353014_1 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 4.77e-207 675.0
DYD3_k127_6353014_10 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001112 296.0
DYD3_k127_6353014_11 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008447 296.0
DYD3_k127_6353014_12 slime layer polysaccharide biosynthetic process K16710 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002502 294.0
DYD3_k127_6353014_13 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008696 280.0
DYD3_k127_6353014_14 haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001744 256.0
DYD3_k127_6353014_15 COG2755 Lysophospholipase L1 and related esterases - - - 0.000000000000000000000000000000000000000000000000000000000000000000007298 239.0
DYD3_k127_6353014_16 asparagine synthase K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000007916 233.0
DYD3_k127_6353014_17 Male sterility protein - - - 0.000000000000000000000000000000000000000000000000000000000000000009836 241.0
DYD3_k127_6353014_18 GDSL-like Lipase/Acylhydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000005702 239.0
DYD3_k127_6353014_19 Phosphoribulokinase / Uridine kinase family K00855,K00876 - 2.7.1.19,2.7.1.48 0.00000000000000000000000000000000000000000000000000000000000007297 225.0
DYD3_k127_6353014_2 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 5.054e-200 652.0
DYD3_k127_6353014_20 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.00000000000000000000000000000000000000000000000000000006411 199.0
DYD3_k127_6353014_21 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.0000000000000000000000000000000000000000000000008688 176.0
DYD3_k127_6353014_22 helix_turn_helix, mercury resistance - - - 0.00000000000000000000000000000000000000001265 156.0
DYD3_k127_6353014_23 DnaJ molecular chaperone homology domain - - - 0.0000000000000000000000000000000000003763 158.0
DYD3_k127_6353014_24 Diacylglycerol kinase K00901 - 2.7.1.107 0.00000000000000000000000004391 111.0
DYD3_k127_6353014_26 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.00002103 55.0
DYD3_k127_6353014_3 Glycosyl transferase family 21 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003125 584.0
DYD3_k127_6353014_4 Flavin containing amine oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002708 565.0
DYD3_k127_6353014_5 MCM2/3/5 family K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006472 465.0
DYD3_k127_6353014_6 PFAM polysaccharide biosynthesis protein K03328 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003546 406.0
DYD3_k127_6353014_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009539 353.0
DYD3_k127_6353014_9 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008036 333.0
DYD3_k127_6354618_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 471.0
DYD3_k127_6354618_1 phosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001342 456.0
DYD3_k127_6354618_11 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000000000000000000001077 176.0
DYD3_k127_6354618_14 - - - - 0.0000000000000000000002178 105.0
DYD3_k127_6354618_15 PilZ domain - - - 0.000000000000000000009171 97.0
DYD3_k127_6354618_18 TPR repeat - - - 0.0000003555 62.0
DYD3_k127_6354618_19 phosphorelay signal transduction system - - - 0.0000254 55.0
DYD3_k127_6354618_2 Peptidogalycan biosysnthesis/recognition K09919 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 433.0
DYD3_k127_6354618_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 392.0
DYD3_k127_6354618_4 Protein kinase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 341.0
DYD3_k127_6354618_5 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009842 331.0
DYD3_k127_6354618_6 von Willebrand factor (vWF) type A domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008574 272.0
DYD3_k127_6354618_7 SMART Integrin alpha beta-propellor repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002795 267.0
DYD3_k127_6354618_8 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000003289 241.0
DYD3_k127_6354618_9 Phospholipase D. Active site motifs. K06131 - - 0.0000000000000000000000000000000000000000000000000000000000000008968 229.0
DYD3_k127_637114_0 Belongs to the glycosyl hydrolase 2 family K01190 - 3.2.1.23 0.0 1020.0
DYD3_k127_637114_1 PFAM Formylglycine-generating sulfatase enzyme K12132 - 2.7.11.1 0.000000000000000000000000000000000009123 138.0
DYD3_k127_6379048_0 nitrite reductase (NAD(P)H) large subunit - - - 0.0 1199.0
DYD3_k127_6379048_1 nitrate reductase (NAP). Only expressed at high levels during aerobic growth. NapAB complex receives electrons from the membrane-anchored tetraheme protein NapC K00372 - - 0.0 1052.0
DYD3_k127_6379048_2 4Fe-4S dicluster domain - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004678 509.0
DYD3_k127_6379048_3 MoeA C-terminal region (domain IV) K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008394 374.0
DYD3_k127_6379048_4 May be involved in the biosynthesis of molybdopterin K03638 - 2.7.7.75 0.00000000000000000000000000000000000000000000000118 184.0
DYD3_k127_6379048_5 - - - - 0.00000000000000000001295 107.0
DYD3_k127_6379048_6 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03635,K21142 - 2.8.1.12 0.000000005576 63.0
DYD3_k127_6407716_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 7.794e-242 755.0
DYD3_k127_6407716_1 Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005116 574.0
DYD3_k127_6407716_2 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 565.0
DYD3_k127_6407716_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002082 393.0
DYD3_k127_6407716_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000001517 244.0
DYD3_k127_6407716_5 PEGA domain - - - 0.00000000000000000000000000000000000000000000000000000000007116 220.0
DYD3_k127_6407716_6 Chlorite dismutase - - - 0.00000000000000000000000000000000000000000000000000000004462 201.0
DYD3_k127_6407716_7 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000000000000000000000000000003139 166.0
DYD3_k127_6407716_8 Protein kinase domain K08884 - 2.7.11.1 0.00005899 51.0
DYD3_k127_640803_0 ADP-glyceromanno-heptose 6-epimerase activity K01784,K12454 - 5.1.3.10,5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007391 573.0
DYD3_k127_640803_1 PFAM NAD dependent epimerase dehydratase family K12454 - 5.1.3.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002235 424.0
DYD3_k127_640803_10 Methyltransferase domain - - - 0.000000000000000000000001549 110.0
DYD3_k127_640803_11 - - - - 0.0000000000000000003631 98.0
DYD3_k127_640803_13 transferase activity, transferring glycosyl groups - - - 0.000000000005115 78.0
DYD3_k127_640803_2 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001291 297.0
DYD3_k127_640803_3 Polysaccharide biosynthesis protein K15894,K17716 - 4.2.1.115,5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000001002 272.0
DYD3_k127_640803_4 Hexapeptide repeat of succinyl-transferase - - - 0.0000000000000000000000000000000000000000000000000000000001831 213.0
DYD3_k127_640803_5 PFAM glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000001505 196.0
DYD3_k127_640803_6 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000007222 171.0
DYD3_k127_640803_7 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000001131 151.0
DYD3_k127_640803_8 Belongs to the frataxin family K06202 - - 0.000000000000000000000000000000719 129.0
DYD3_k127_640803_9 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000007277 129.0
DYD3_k127_6416702_0 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 2.419e-217 686.0
DYD3_k127_6416702_1 Belongs to the glycosyl hydrolase 5 (cellulase A) family K01179 - 3.2.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008418 309.0
DYD3_k127_6416702_2 Belongs to the glycosyl hydrolase 8 (cellulase D) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003039 301.0
DYD3_k127_6416702_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000001755 184.0
DYD3_k127_6416702_6 Cupin K18991 - - 0.00000000000000000005375 90.0
DYD3_k127_6437103_0 dehydrogenase e1 component K00164 - 1.2.4.2 0.0 1176.0
DYD3_k127_6437103_1 CoA-substrate-specific enzyme activase - - - 4.994e-268 835.0
DYD3_k127_6437103_2 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00627,K00658 - 2.3.1.12,2.3.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003901 459.0
DYD3_k127_6437103_3 PFAM Polyphosphate kinase 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002827 467.0
DYD3_k127_6437103_4 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000001496 168.0
DYD3_k127_6437103_5 Transcriptional regulatory protein, C terminal - - - 0.0001077 51.0
DYD3_k127_6443204_0 Two component regulator propeller - - - 1.759e-212 680.0
DYD3_k127_6443204_1 Predicted membrane protein (DUF2254) - - - 1.26e-204 649.0
DYD3_k127_6443204_10 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003504 263.0
DYD3_k127_6443204_11 deoxyhypusine monooxygenase activity K01932 - - 0.00000000000000000000000000000000000000000000000000000000000000000001062 261.0
DYD3_k127_6443204_12 Belongs to the UPF0758 family K03630 - - 0.00000000000000000000000000000000000000000000000000000000004886 216.0
DYD3_k127_6443204_13 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.000000000000000000000000000000000000000000000000000004053 212.0
DYD3_k127_6443204_14 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000000000005858 203.0
DYD3_k127_6443204_15 Fatty acid hydroxylase superfamily - - - 0.0000000000000000000000000000000000000000000000022 182.0
DYD3_k127_6443204_16 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) K06169 - - 0.000000000000000000000000000000000000000000000006465 179.0
DYD3_k127_6443204_19 - - - - 0.00000000000000000000000000005599 130.0
DYD3_k127_6443204_2 translation initiation factor activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005605 588.0
DYD3_k127_6443204_20 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.000000000000004533 79.0
DYD3_k127_6443204_21 Stigma-specific protein, Stig1 - - - 0.00000000000002075 86.0
DYD3_k127_6443204_22 DNA uptake protein and related DNA-binding proteins K02237 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000004655 79.0
DYD3_k127_6443204_25 - - - - 0.0007259 45.0
DYD3_k127_6443204_3 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000593 505.0
DYD3_k127_6443204_4 SMART protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002542 506.0
DYD3_k127_6443204_5 Belongs to the ompA family K20276 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002455 443.0
DYD3_k127_6443204_6 Transporter K03305 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006554 371.0
DYD3_k127_6443204_7 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 GO:0003674,GO:0003824,GO:0004590,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000177 328.0
DYD3_k127_6443204_8 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001958 315.0
DYD3_k127_6443204_9 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000006822 265.0
DYD3_k127_6468420_0 DNA-binding response regulator K07713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003847 409.0
DYD3_k127_6468420_1 DNA-binding response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000508 293.0
DYD3_k127_6468420_2 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304,K12267 - 1.8.4.11,1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000000000369 239.0
DYD3_k127_6468420_3 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.00000000000000000000000000000000000000000000000000000000000000008063 236.0
DYD3_k127_6468420_4 oxidoreductase activity K07114 - - 0.00000000000000000000000000000000000001896 159.0
DYD3_k127_6468420_5 cheY-homologous receiver domain - - - 0.000000000000000000000000001969 115.0
DYD3_k127_6468420_7 N,N-dimethylaniline monooxygenase activity K07222 - - 0.000008878 51.0
DYD3_k127_6468420_8 Low-density lipoprotein receptor domain class A - - - 0.0009203 51.0
DYD3_k127_6480835_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003659 499.0
DYD3_k127_6480835_1 Vitamin K epoxide reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001887 413.0
DYD3_k127_6480835_2 chlorophyll binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005965 288.0
DYD3_k127_6480835_3 Glutathione-dependent formaldehyde-activating enzyme - - - 0.000000000000000000000000000000000000000000000004686 177.0
DYD3_k127_6480835_4 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000000000000000000000000000000007073 180.0
DYD3_k127_6480835_5 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.0000000000000000000005639 106.0
DYD3_k127_6480835_6 Tetratricopeptide repeat - - - 0.000009774 58.0
DYD3_k127_6480835_7 carboxylic ester hydrolase activity - - - 0.00002042 46.0
DYD3_k127_6561413_0 Helicase - - - 6.845e-214 678.0
DYD3_k127_6561413_1 Pectate lyase K01728 - 4.2.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 464.0
DYD3_k127_6561413_10 Putative restriction endonuclease - - - 0.0000000000000000001878 93.0
DYD3_k127_6561413_11 Toxic component of a toxin-antitoxin (TA) module. An RNase - GO:0008150,GO:0040008,GO:0045926,GO:0048519,GO:0050789,GO:0065007 - 0.00000003525 65.0
DYD3_k127_6561413_12 Bacterial antitoxin of type II TA system, VapB - - - 0.0002009 46.0
DYD3_k127_6561413_2 HEAT repeats - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004173 348.0
DYD3_k127_6561413_3 NAD-dependent epimerase dehydratase K00091 - 1.1.1.219 0.00000000000000000000000000000000000000000000000000000003822 210.0
DYD3_k127_6561413_4 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.0000000000000000000000000000000000000000000000000000007146 207.0
DYD3_k127_6561413_5 - K07283 - - 0.0000000000000000000000000000000000000000000000001863 187.0
DYD3_k127_6561413_6 aminopeptidase N - - - 0.0000000000000000000000000000000000000000000000003465 200.0
DYD3_k127_6561413_7 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000003772 189.0
DYD3_k127_6561413_8 mechanosensitive ion channel activity K03282 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0032535,GO:0042592,GO:0044425,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0090066 - 0.0000000000000000000000000000003059 127.0
DYD3_k127_6561413_9 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.00000000000000000003174 97.0
DYD3_k127_6580814_0 Helicase K17675 - 3.6.4.13 3.236e-221 712.0
DYD3_k127_6580814_1 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate K08289 - 2.1.2.2 2.246e-194 612.0
DYD3_k127_6580814_10 Flagellar basal body rod K02396 - - 0.0000000001839 74.0
DYD3_k127_6580814_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002868 310.0
DYD3_k127_6580814_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 292.0
DYD3_k127_6580814_5 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000000000000000006588 153.0
DYD3_k127_6580814_6 Hydantoinase/oxoprolinase N-terminal region K01469 - 3.5.2.9 0.000000000000000000000000000000002786 130.0
DYD3_k127_6580814_8 Thioredoxin-like domain - - - 0.0000000000000000000000000000001134 130.0
DYD3_k127_6623107_0 Fibronectin type III-like domain K05349 - 3.2.1.21 5.14e-255 805.0
DYD3_k127_6623107_1 C-terminal, D2-small domain, of ClpB protein K03696 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007809 531.0
DYD3_k127_6623107_10 hemolysin - - - 0.000006774 55.0
DYD3_k127_6623107_2 Heat shock 70 kDa protein K04043 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002135 279.0
DYD3_k127_6623107_3 Serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000004377 194.0
DYD3_k127_6623107_4 Clostripain family - - - 0.00000000000000000000000000000000000000000000001936 189.0
DYD3_k127_6623107_6 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000001554 98.0
DYD3_k127_6623107_8 GrpE K03687 - - 0.000001985 59.0
DYD3_k127_6623107_9 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006457,GO:0006810,GO:0008104,GO:0008150,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0022607,GO:0031224,GO:0031226,GO:0032977,GO:0033036,GO:0034613,GO:0042886,GO:0043933,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051205,GO:0051234,GO:0051259,GO:0051260,GO:0051641,GO:0061024,GO:0065003,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072657,GO:0090150 - 0.000002686 61.0
DYD3_k127_6649088_0 histone H2A K63-linked ubiquitination K03404,K07114 - 6.6.1.1 1.034e-230 735.0
DYD3_k127_6649088_1 cellulose binding - - - 2.84e-214 689.0
DYD3_k127_6649088_2 Melibiase K07407 - 3.2.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002306 472.0
DYD3_k127_6649088_3 ABC-type multidrug transport system ATPase component K21397 - - 0.00000000000000000000000000000000000000000000000000009949 196.0
DYD3_k127_6649088_4 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000278 167.0
DYD3_k127_6649088_5 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000005555 168.0
DYD3_k127_6649088_6 histone H2A K63-linked ubiquitination - - - 0.0000000000000000000000000000001807 136.0
DYD3_k127_6649088_7 Belongs to the UPF0235 family K09131 - - 0.000000000002079 72.0
DYD3_k127_6649088_8 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 GO:0008150,GO:0040007 1.2.1.70 0.00002396 53.0
DYD3_k127_6654969_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007114 418.0
DYD3_k127_6654969_1 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 334.0
DYD3_k127_6654969_2 it plays a direct role in the translocation of protons across the membrane K02108 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016021,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0042777,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003763 292.0
DYD3_k127_6654969_3 Cysteine-rich domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000002375 247.0
DYD3_k127_6654969_4 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.00000000000000000000000000000000000000000000000000000000001146 214.0
DYD3_k127_6654969_5 Forkhead associated domain - - - 0.0000000000000000000000000000000000000000001901 160.0
DYD3_k127_6654969_6 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.0000000000000000000007315 99.0
DYD3_k127_6654969_7 GAF domain - - - 0.000000000008185 66.0
DYD3_k127_6654969_8 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter - - - 0.000000000008962 70.0
DYD3_k127_6690634_0 Glycosyl hydrolase 36 superfamily, catalytic domain K00702 - 2.4.1.20 0.0 1157.0
DYD3_k127_6690634_1 Ribonuclease E/G family K08301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004382 476.0
DYD3_k127_6690634_2 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005386 362.0
DYD3_k127_6690634_3 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.000000000000000000000000000000000000000000000000000001421 199.0
DYD3_k127_6690634_4 unfolded protein binding K04043 - - 0.00000000000000000000000001467 127.0
DYD3_k127_6693247_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009465 496.0
DYD3_k127_6693247_1 Protein of unknown function (DUF1587) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005343 323.0
DYD3_k127_6693247_2 Protein of unknown function (DUF1552) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001664 265.0
DYD3_k127_6693247_3 - - - - 0.00000000000000000000000000000000000000000000000001794 198.0
DYD3_k127_6693247_4 TonB-dependent Receptor Plug Domain - - - 0.00000000000000000000000000000000000000000008986 168.0
DYD3_k127_6693271_0 Belongs to the ABC transporter superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002275 416.0
DYD3_k127_6693271_1 - - - - 0.000000000000000000000000000000000000002582 158.0
DYD3_k127_6693271_2 Sigma-70, region 4 K03088 - - 0.0000000004914 62.0
DYD3_k127_6693271_3 - - - - 0.00005061 52.0
DYD3_k127_6693271_4 Heavy-metal resistance - - - 0.0005777 51.0
DYD3_k127_6700412_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0 1027.0
DYD3_k127_6700412_1 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.0 1011.0
DYD3_k127_6700412_10 COG0618 Exopolyphosphatase-related proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009048 323.0
DYD3_k127_6700412_11 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004469 305.0
DYD3_k127_6700412_12 Mediates influx of magnesium ions K03284,K16074 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 305.0
DYD3_k127_6700412_13 cellulose 1,4-beta-cellobiosidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007808 241.0
DYD3_k127_6700412_14 protein containing a von Willebrand factor type A (vWA) domain - - - 0.000000000000000000000000000000000000000000000000000000007508 214.0
DYD3_k127_6700412_15 DNA recombination-mediator protein A K04096 - - 0.00000000000000000000000000000000000000000000000000162 194.0
DYD3_k127_6700412_16 protein conserved in bacteria K09930 - - 0.00000000000000000000000000000000000000000000000003758 183.0
DYD3_k127_6700412_17 Cytidine and deoxycytidylate deaminase zinc-binding region - - - 0.000000000000000000000000000000000000000000000006377 181.0
DYD3_k127_6700412_18 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000002771 175.0
DYD3_k127_6700412_19 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.00000000000000000000000000000000000000000004269 181.0
DYD3_k127_6700412_2 unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins - - - 1.946e-312 981.0
DYD3_k127_6700412_20 CDP-alcohol phosphatidyltransferase K00995,K08744 - 2.7.8.41,2.7.8.5 0.0000000000000000000000000000000003769 142.0
DYD3_k127_6700412_22 Putative DNA-binding domain - - - 0.000000000000004091 84.0
DYD3_k127_6700412_23 Family of unknown function (DUF1028) - - - 0.000000000000005308 86.0
DYD3_k127_6700412_25 Non-lysosomal glucosylceramidase that catalyzes the conversion of glucosylceramide to free glucose and ceramide K17108 GO:0003674,GO:0003824,GO:0004348,GO:0004553,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005790,GO:0005886,GO:0006082,GO:0006629,GO:0006643,GO:0006664,GO:0006665,GO:0006687,GO:0006807,GO:0007275,GO:0007399,GO:0007417,GO:0008150,GO:0008152,GO:0008202,GO:0008206,GO:0008422,GO:0009056,GO:0009987,GO:0012505,GO:0015926,GO:0016020,GO:0016021,GO:0016137,GO:0016139,GO:0016787,GO:0016798,GO:0019752,GO:0021953,GO:0021954,GO:0022008,GO:0030154,GO:0030182,GO:0031224,GO:0032501,GO:0032502,GO:0032787,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0044424,GO:0044425,GO:0044444,GO:0044464,GO:0048468,GO:0048666,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0071704,GO:0071944,GO:1901135,GO:1901136,GO:1901360,GO:1901564,GO:1901575,GO:1901615,GO:1901657,GO:1901658,GO:1903509 3.2.1.45 0.0000000001493 75.0
DYD3_k127_6700412_3 3-hydroxyacyl-CoA dehydrogenase K07516 - 1.1.1.35 6.064e-240 768.0
DYD3_k127_6700412_4 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 2.1.1.74 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000327 544.0
DYD3_k127_6700412_5 Belongs to the thiolase family K00632 - 2.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005446 461.0
DYD3_k127_6700412_6 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002262 467.0
DYD3_k127_6700412_7 Voltage gated chloride channel K03281 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006109 460.0
DYD3_k127_6700412_8 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002149 454.0
DYD3_k127_6700412_9 Mechanosensitive ion channel K22044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003611 341.0
DYD3_k127_6703254_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 8.928e-200 631.0
DYD3_k127_6703254_1 pilus assembly protein K02662 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005287 466.0
DYD3_k127_6703254_2 Cytidylyltransferase family K00981 - 2.7.7.41 0.0000000000000000000000000000000000000000000000000000000000000000000000002953 255.0
DYD3_k127_6703254_3 Fimbrial assembly protein (PilN) K02663 - - 0.0000000000000000000000000000000000000000000000000000000000001498 224.0
DYD3_k127_6703254_4 Pilus assembly protein, PilO K02664 - - 0.0000000000000000000000000000000000000000000037 182.0
DYD3_k127_6703254_5 Pilus assembly protein, PilP K02665 - - 0.0000000000000000000000000000000000000000009133 171.0
DYD3_k127_6703254_6 Sigma-70, region 4 K02405 - - 0.00000000000000000000000000000000001161 146.0
DYD3_k127_6703254_7 type IV pilus secretin PilQ K02666 - - 0.0000000000000001536 87.0
DYD3_k127_6719316_0 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 5.972e-213 668.0
DYD3_k127_6719316_1 Aldehyde dehydrogenase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001891 403.0
DYD3_k127_6719316_2 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005209 402.0
DYD3_k127_6719316_3 Bacterial protein of unknown function (DUF882) - - - 0.00000000000000000000000000000000000000000002661 174.0
DYD3_k127_6719316_5 serine threonine protein kinase - - - 0.00000000000000000000001183 116.0
DYD3_k127_6719316_7 peptidyl-tyrosine sulfation - - - 0.0000000000000003275 91.0
DYD3_k127_6719316_8 Lysin motif - - - 0.0000000000002896 80.0
DYD3_k127_6719316_9 serine threonine protein kinase - - - 0.00000000002466 77.0
DYD3_k127_6765577_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004195 401.0
DYD3_k127_6765577_1 Kinase, PfkB family K00874 - 2.7.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005735 364.0
DYD3_k127_6765577_2 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000002194 213.0
DYD3_k127_6796622_0 serine threonine protein kinase K08884,K12132 - 2.7.11.1 9.256e-210 672.0
DYD3_k127_6796622_1 High confidence in function and specificity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004153 551.0
DYD3_k127_6796622_10 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 GO:0000166,GO:0003674,GO:0003824,GO:0004764,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576,GO:1901615 1.1.1.25 0.0000000000000000000000000000000000000000000000000000005035 206.0
DYD3_k127_6796622_11 Immune inhibitor A peptidase M6 - - - 0.0000000000006441 81.0
DYD3_k127_6796622_12 Binding-protein-dependent transport system inner membrane component K02026 - - 0.000001522 51.0
DYD3_k127_6796622_13 Bacterial extracellular solute-binding protein - - - 0.000008844 51.0
DYD3_k127_6796622_2 Biotin carboxylase C-terminal domain K01941,K01961 - 6.3.4.14,6.3.4.6,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002491 531.0
DYD3_k127_6796622_3 Binding-protein-dependent transport system inner membrane component K17319 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002964 507.0
DYD3_k127_6796622_4 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006392 456.0
DYD3_k127_6796622_5 binding-protein-dependent transport systems inner membrane component K02026,K17320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 419.0
DYD3_k127_6796622_6 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002065 368.0
DYD3_k127_6796622_7 PFAM extracellular solute-binding protein family 1 K17318 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005183 269.0
DYD3_k127_6796622_8 histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001136 280.0
DYD3_k127_6796622_9 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001935 263.0
DYD3_k127_6813575_0 DNA-binding response regulator K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 533.0
DYD3_k127_6813575_1 dioxygenase K00457,K16421 - 1.13.11.27,1.13.11.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 520.0
DYD3_k127_6813575_10 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000134 117.0
DYD3_k127_6813575_11 extracellular ligand-gated ion channel activity K00771,K03068,K03240,K03927,K04814,K05094,K08843,K12826,K17495 GO:0000245,GO:0000375,GO:0000377,GO:0000398,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005681,GO:0005684,GO:0005686,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016071,GO:0022607,GO:0022613,GO:0022618,GO:0030532,GO:0032991,GO:0034622,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0071004,GO:0071010,GO:0071013,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0097525,GO:0120114,GO:1901360,GO:1901363,GO:1902494,GO:1990904 2.4.2.26,2.7.10.1,2.7.11.1,3.1.1.1,3.1.1.56,3.1.1.84 0.00000001275 66.0
DYD3_k127_6813575_2 homogentisate 12-dioxygenase K00451 - 1.13.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003721 507.0
DYD3_k127_6813575_3 Fumarylacetoacetate (FAA) hydrolase family K16171 - 3.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007618 432.0
DYD3_k127_6813575_4 Biopterin-dependent aromatic amino acid hydroxylase K00500 - 1.14.16.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005112 371.0
DYD3_k127_6813575_5 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002722 342.0
DYD3_k127_6813575_6 ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 322.0
DYD3_k127_6813575_7 maleylacetoacetate isomerase K01800,K01801 - 5.2.1.2,5.2.1.4 0.000000000000000000000000000000000000000000000000000000001563 219.0
DYD3_k127_6813575_8 Histidine kinase A domain protein K02030 - - 0.0000000000000000000000000000000000000000000000000008223 203.0
DYD3_k127_6813575_9 PFAM Protein kinase domain K08309 - - 0.00000000000000000000000000000000000008914 158.0
DYD3_k127_6837542_0 Vault protein inter-alpha-trypsin domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 624.0
DYD3_k127_6837542_1 Ammonium Transporter Family K03320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002018 505.0
DYD3_k127_6837542_2 Belongs to the FPG family K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 403.0
DYD3_k127_6837542_3 Predicted membrane protein (DUF2238) K08984 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002578 296.0
DYD3_k127_6837542_4 PFAM beta-lactamase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000009399 229.0
DYD3_k127_6837542_5 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000000000002197 158.0
DYD3_k127_6837542_6 Mediates influx of magnesium ions K03284 - - 0.000000000000000000000000000000000000001659 160.0
DYD3_k127_6837542_7 PFAM Polyketide cyclase dehydrase and lipid transport - - - 0.0000000000000000000000000000000000007295 145.0
DYD3_k127_6837542_8 Thioesterase-like superfamily K07107 - - 0.00000000000000000000000000005329 128.0
DYD3_k127_6837542_9 (FHA) domain - - - 0.0000000001311 66.0
DYD3_k127_68389_0 UPF0313 protein - - - 5.266e-299 929.0
DYD3_k127_68389_1 endo-1,4-beta-xylanase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002779 446.0
DYD3_k127_68389_2 lipolytic protein G-D-S-L family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009829 443.0
DYD3_k127_68389_3 Forkhead associated domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006294 395.0
DYD3_k127_68389_4 Cytochrome C biogenesis protein transmembrane region K04084 - 1.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005493 394.0
DYD3_k127_68389_5 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000002687 213.0
DYD3_k127_68389_6 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000114 230.0
DYD3_k127_68389_7 Nudix hydrolase K03574 - 3.6.1.55 0.0000000000000000000000000000000000000000000000000000003376 198.0
DYD3_k127_68389_9 competence protein - - - 0.0000000000000000000000000001907 125.0
DYD3_k127_6892174_0 AMP-binding enzyme C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002855 527.0
DYD3_k127_6892174_1 Psort location CytoplasmicMembrane, score 10.00 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002179 417.0
DYD3_k127_6892174_10 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000001457 130.0
DYD3_k127_6892174_11 Phosphopantetheine attachment site - - - 0.00000000000000000000000000001804 120.0
DYD3_k127_6892174_12 Belongs to the P-Pant transferase superfamily K06133 - - 0.0000000000000000000001338 107.0
DYD3_k127_6892174_13 Glycosyl transferases group 1 - - - 0.000000000009105 68.0
DYD3_k127_6892174_2 Belongs to the short-chain dehydrogenases reductases (SDR) family K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006312 369.0
DYD3_k127_6892174_4 Acyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006196 280.0
DYD3_k127_6892174_5 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000002683 237.0
DYD3_k127_6892174_6 Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate - - - 0.0000000000000000000000000000000000000000000000000009575 203.0
DYD3_k127_6892174_7 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000005051 151.0
DYD3_k127_6892174_8 Calcineurin-like phosphoesterase K07098 - - 0.0000000000000000000000000000002537 138.0
DYD3_k127_6892174_9 integral membrane protein - - - 0.000000000000000000000000000000611 135.0
DYD3_k127_6897201_0 DNA-binding response regulator K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 564.0
DYD3_k127_6897201_1 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955 - 2.7.1.25,2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009812 503.0
DYD3_k127_6897201_2 HAMP domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002031 385.0
DYD3_k127_6897201_3 hydrolase activity, acting on ester bonds - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005873 383.0
DYD3_k127_6897201_4 Sulfotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003739 255.0
DYD3_k127_6897201_5 growth of symbiont in host cell - - - 0.00000000000000000000000000000005926 129.0
DYD3_k127_6897201_6 Pkd domain containing protein - - - 0.000009283 51.0
DYD3_k127_6897201_7 protein import - - - 0.0004148 51.0
DYD3_k127_6907678_0 Domain of unknown function (DUF362) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002089 574.0
DYD3_k127_6907678_1 MBOAT, membrane-bound O-acyltransferase family K19294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005516 540.0
DYD3_k127_6907678_10 nUDIX hydrolase K01515 - 3.6.1.13 0.0000000000000000000000000000000000000000000000000001836 194.0
DYD3_k127_6907678_12 membrane - - - 0.000000000000000000000000000000000000000006685 169.0
DYD3_k127_6907678_13 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000003674 136.0
DYD3_k127_6907678_14 homocysteine K00547 - 2.1.1.10 0.0000000000000000000000000000004351 141.0
DYD3_k127_6907678_18 domain, Protein - - - 0.0000000000000116 85.0
DYD3_k127_6907678_19 - - - - 0.00000000009476 73.0
DYD3_k127_6907678_2 GGDEF domain K03412,K03413 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001766 541.0
DYD3_k127_6907678_21 AAA domain - - - 0.0001534 49.0
DYD3_k127_6907678_3 glutamate--cysteine ligase K01919 - 6.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 452.0
DYD3_k127_6907678_4 xylan catabolic process K03932 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004905 420.0
DYD3_k127_6907678_5 Belongs to the heat shock protein 70 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002159 372.0
DYD3_k127_6907678_6 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004347 382.0
DYD3_k127_6907678_7 ATP-NAD kinase K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003167 296.0
DYD3_k127_6907678_8 FIST N domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002314 297.0
DYD3_k127_6907678_9 Nitrate and nitrite sensing K03407 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000002389 266.0
DYD3_k127_6922692_0 AcrB/AcrD/AcrF family K03296 - - 2.326e-278 891.0
DYD3_k127_6922692_1 Alpha-L-fucosidase K15923 - 3.2.1.51 7.518e-204 684.0
DYD3_k127_6922692_10 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000001584 164.0
DYD3_k127_6922692_11 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000004811 162.0
DYD3_k127_6922692_12 - - - - 0.000000000000000000002071 103.0
DYD3_k127_6922692_13 protein kinase activity - - - 0.000000007343 70.0
DYD3_k127_6922692_14 zinc-ribbon domain - - - 0.000001646 61.0
DYD3_k127_6922692_2 Mitochondrial biogenesis AIM24 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005226 306.0
DYD3_k127_6922692_3 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 298.0
DYD3_k127_6922692_4 Mitochondrial biogenesis AIM24 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004701 284.0
DYD3_k127_6922692_5 Mitochondrial biogenesis AIM24 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002768 289.0
DYD3_k127_6922692_6 Outer membrane efflux protein K12340 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000494 285.0
DYD3_k127_6922692_7 Involved in the biosynthesis of porphyrin-containing compound - GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000008549 221.0
DYD3_k127_6922692_8 Haem-binding domain - - - 0.000000000000000000000000000000000000000000000001104 179.0
DYD3_k127_6922692_9 Hydrolase, NUDIX family - - - 0.0000000000000000000000000000000000000000000003981 183.0
DYD3_k127_6926648_0 Acts as a magnesium transporter K06213 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002686 486.0
DYD3_k127_6926648_1 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 465.0
DYD3_k127_6926648_2 EAL domain - - - 0.00000000000000000000000000000000000000000000000000002991 203.0
DYD3_k127_6926648_3 HDOD domain - - - 0.00000000000000000000000000000000000000000000000001882 198.0
DYD3_k127_6926648_4 Type II secretion system (T2SS), protein E, N-terminal domain - - - 0.0000000000000000000000000000000000000000000003822 190.0
DYD3_k127_6926648_5 diguanylate cyclase - - - 0.00000000000000000000000000000000000007273 160.0
DYD3_k127_6926648_6 Extensin-like protein C-terminus - - - 0.0000000000000000000000000000000000004148 155.0
DYD3_k127_6926648_7 Putative restriction endonuclease - - - 0.0000000000000000000000118 109.0
DYD3_k127_6926648_8 EAL domain - - - 0.000000963 57.0
DYD3_k127_6933511_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.0 1093.0
DYD3_k127_6933511_1 Transport of potassium into the cell K03549 - - 3.07e-216 689.0
DYD3_k127_6933511_10 xylan catabolic process K03932 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004044 263.0
DYD3_k127_6933511_11 Belongs to the glycosyl hydrolase 12 (cellulase H) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003895 263.0
DYD3_k127_6933511_12 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009888 248.0
DYD3_k127_6933511_13 transferase activity, transferring acyl groups other than amino-acyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000004676 251.0
DYD3_k127_6933511_14 - - - - 0.0000000000000000000000000000000000000000000000000009356 197.0
DYD3_k127_6933511_15 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000001737 189.0
DYD3_k127_6933511_16 2-oxoacid dehydrogenases acyltransferase (catalytic domain) - - - 0.0000000000000000000000000000000008947 140.0
DYD3_k127_6933511_17 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.0000000000000000000000001332 116.0
DYD3_k127_6933511_19 stigma-specific Stig1 family protein - GO:0000003,GO:0000302,GO:0001101,GO:0003006,GO:0005575,GO:0005576,GO:0005615,GO:0006950,GO:0006952,GO:0006979,GO:0007154,GO:0007165,GO:0007275,GO:0008150,GO:0009605,GO:0009607,GO:0009617,GO:0009719,GO:0009725,GO:0009751,GO:0009753,GO:0009755,GO:0009791,GO:0009863,GO:0009867,GO:0009889,GO:0009987,GO:0010033,GO:0010035,GO:0010154,GO:0010193,GO:0010337,GO:0010565,GO:0010817,GO:0010941,GO:0010942,GO:0014070,GO:0019216,GO:0019217,GO:0019222,GO:0022414,GO:0023052,GO:0031323,GO:0031326,GO:0032350,GO:0032501,GO:0032502,GO:0032870,GO:0035690,GO:0042221,GO:0042304,GO:0042493,GO:0042742,GO:0043207,GO:0044421,GO:0046677,GO:0046885,GO:0046890,GO:0048316,GO:0048518,GO:0048522,GO:0048608,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051704,GO:0051707,GO:0051716,GO:0061458,GO:0062012,GO:0065007,GO:0065008,GO:0070887,GO:0071229,GO:0071236,GO:0071310,GO:0071395,GO:0071407,GO:0071446,GO:0071495,GO:0080090,GO:0080140,GO:0080141,GO:0080142,GO:0098542,GO:1901700,GO:1901701 - 0.00000000000000006913 95.0
DYD3_k127_6933511_2 ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003174 531.0
DYD3_k127_6933511_20 protein kinase activity - - - 0.0000000000000001659 93.0
DYD3_k127_6933511_21 amine dehydrogenase activity - - - 0.000000000000002272 89.0
DYD3_k127_6933511_23 Glycoside hydrolase family 44 - - - 0.0000000003275 70.0
DYD3_k127_6933511_24 Protein kinase domain - - - 0.000000002403 70.0
DYD3_k127_6933511_26 Neurogenic locus notch homolog protein 2 K02599,K20994,K20995 GO:0000003,GO:0000122,GO:0000139,GO:0000278,GO:0000578,GO:0000902,GO:0000904,GO:0001525,GO:0001568,GO:0001654,GO:0001655,GO:0001667,GO:0001700,GO:0001701,GO:0001708,GO:0001709,GO:0001736,GO:0001738,GO:0001745,GO:0001751,GO:0001752,GO:0001754,GO:0001773,GO:0001775,GO:0001816,GO:0001822,GO:0001889,GO:0001890,GO:0001894,GO:0001932,GO:0001933,GO:0001934,GO:0001944,GO:0001947,GO:0002009,GO:0002011,GO:0002052,GO:0002064,GO:0002065,GO:0002066,GO:0002164,GO:0002165,GO:0002213,GO:0002252,GO:0002263,GO:0002274,GO:0002285,GO:0002312,GO:0002313,GO:0002315,GO:0002335,GO:0002366,GO:0002376,GO:0002437,GO:0002520,GO:0002521,GO:0002573,GO:0002682,GO:0002683,GO:0002684,GO:0002761,GO:0002763,GO:0002790,GO:0003002,GO:0003006,GO:0003007,GO:0003008,GO:0003143,GO:0003170,GO:0003177,GO:0003179,GO:0003184,GO:0003205,GO:0003206,GO:0003209,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0003682,GO:0004888,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005768,GO:0005770,GO:0005783,GO:0005789,GO:0005794,GO:0005829,GO:0005886,GO:0005887,GO:0005911,GO:0005912,GO:0005929,GO:0006109,GO:0006110,GO:0006139,GO:0006140,GO:0006351,GO:0006352,GO:0006355,GO:0006357,GO:0006366,GO:0006367,GO:0006725,GO:0006807,GO:0006810,GO:0006915,GO:0006928,GO:0006935,GO:0006950,GO:0006952,GO:0006954,GO:0006955,GO:0006959,GO:0006996,GO:0007010,GO:0007015,GO:0007049,GO:0007050,GO:0007154,GO:0007155,GO:0007157,GO:0007162,GO:0007163,GO:0007164,GO:0007165,GO:0007166,GO:0007219,GO:0007267,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007293,GO:0007297,GO:0007298,GO:0007304,GO:0007306,GO:0007308,GO:0007309,GO:0007314,GO:0007346,GO:0007350,GO:0007351,GO:0007368,GO:0007386,GO:0007389,GO:0007391,GO:0007398,GO:0007399,GO:0007400,GO:0007403,GO:0007405,GO:0007409,GO:0007411,GO:0007417,GO:0007419,GO:0007422,GO:0007423,GO:0007424,GO:0007440,GO:0007442,GO:0007443,GO:0007444,GO:0007446,GO:0007447,GO:0007449,GO:0007450,GO:0007451,GO:0007455,GO:0007460,GO:0007464,GO:0007472,GO:0007473,GO:0007474,GO:0007476,GO:0007478,GO:0007480,GO:0007483,GO:0007484,GO:0007485,GO:0007498,GO:0007507,GO:0007517,GO:0007519,GO:0007521,GO:0007548,GO:0007552,GO:0007560,GO:0007568,GO:0007610,GO:0007611,GO:0007613,GO:0007616,GO:0008045,GO:0008052,GO:0008104,GO:0008134,GO:0008150,GO:0008152,GO:0008219,GO:0008283,GO:0008284,GO:0008340,GO:0008347,GO:0008356,GO:0008358,GO:0008407,GO:0008587,GO:0008593,GO:0008595,GO:0009058,GO:0009059,GO:0009306,GO:0009605,GO:0009607,GO:0009608,GO:0009611,GO:0009617,GO:0009653,GO:0009790,GO:0009791,GO:0009792,GO:0009798,GO:0009799,GO:0009855,GO:0009880,GO:0009886,GO:0009887,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009948,GO:0009950,GO:0009952,GO:0009953,GO:0009954,GO:0009966,GO:0009967,GO:0009968,GO:0009986,GO:0009987,GO:0009994,GO:0009996,GO:0010001,GO:0010160,GO:0010259,GO:0010453,GO:0010454,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010563,GO:0010564,GO:0010604,GO:0010605,GO:0010623,GO:0010628,GO:0010629,GO:0010631,GO:0010646,GO:0010647,GO:0010648,GO:0010720,GO:0010721,GO:0010927,GO:0010941,GO:0010942,GO:0012501,GO:0012505,GO:0014016,GO:0014017,GO:0014019,GO:0014706,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016070,GO:0016330,GO:0016331,GO:0016333,GO:0016348,GO:0016360,GO:0016477,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019827,GO:0019899,GO:0019953,GO:0021700,GO:0021781,GO:0022008,GO:0022402,GO:0022407,GO:0022408,GO:0022412,GO:0022414,GO:0022416,GO:0022603,GO:0022607,GO:0022610,GO:0022612,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030029,GO:0030030,GO:0030036,GO:0030054,GO:0030097,GO:0030098,GO:0030099,GO:0030139,GO:0030154,GO:0030155,GO:0030182,GO:0030183,GO:0030326,GO:0030510,GO:0030513,GO:0030539,GO:0030703,GO:0030707,GO:0030708,GO:0030713,GO:0030718,GO:0030720,GO:0030808,GO:0030811,GO:0030855,GO:0031090,GO:0031099,GO:0031175,GO:0031224,GO:0031226,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031329,GO:0031344,GO:0031399,GO:0031400,GO:0031401,GO:0031410,GO:0031974,GO:0031981,GO:0031982,GO:0031984,GO:0032268,GO:0032269,GO:0032270,GO:0032501,GO:0032502,GO:0032504,GO:0032633,GO:0032774,GO:0032835,GO:0032872,GO:0032873,GO:0032940,GO:0032989,GO:0032990,GO:0032991,GO:0033036,GO:0034641,GO:0034645,GO:0034654,GO:0035003,GO:0035050,GO:0035107,GO:0035108,GO:0035112,GO:0035113,GO:0035114,GO:0035120,GO:0035126,GO:0035153,GO:0035155,GO:0035157,GO:0035161,GO:0035162,GO:0035163,GO:0035165,GO:0035166,GO:0035167,GO:0035168,GO:0035170,GO:0035171,GO:0035172,GO:0035203,GO:0035204,GO:0035214,GO:0035215,GO:0035218,GO:0035220,GO:0035222,GO:0035239,GO:0035264,GO:0035265,GO:0035282,GO:0035285,GO:0035295,GO:0035622,GO:0035850,GO:0036011,GO:0036099,GO:0036335,GO:0038023,GO:0040007,GO:0040008,GO:0040009,GO:0040011,GO:0042051,GO:0042060,GO:0042063,GO:0042067,GO:0042113,GO:0042127,GO:0042175,GO:0042221,GO:0042246,GO:0042325,GO:0042326,GO:0042327,GO:0042330,GO:0042386,GO:0042387,GO:0042461,GO:0042462,GO:0042478,GO:0042480,GO:0042592,GO:0042659,GO:0042675,GO:0042676,GO:0042686,GO:0042688,GO:0042689,GO:0042691,GO:0042692,GO:0042693,GO:0042706,GO:0042742,GO:0042886,GO:0042981,GO:0042995,GO:0043009,GO:0043010,GO:0043011,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043235,GO:0043296,GO:0043408,GO:0043409,GO:0043410,GO:0043467,GO:0043470,GO:0043523,GO:0043525,GO:0043696,GO:0043697,GO:0044085,GO:0044087,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0044703,GO:0045165,GO:0045168,GO:0045184,GO:0045314,GO:0045316,GO:0045321,GO:0045463,GO:0045465,GO:0045466,GO:0045468,GO:0045595,GO:0045596,GO:0045597,GO:0045610,GO:0045611,GO:0045612,GO:0045613,GO:0045614,GO:0045637,GO:0045639,GO:0045664,GO:0045665,GO:0045670,GO:0045672,GO:0045747,GO:0045786,GO:0045787,GO:0045892,GO:0045893,GO:0045926,GO:0045931,GO:0045934,GO:0045935,GO:0045936,GO:0045937,GO:0045944,GO:0045967,GO:0046328,GO:0046329,GO:0046331,GO:0046483,GO:0046530,GO:0046532,GO:0046533,GO:0046552,GO:0046578,GO:0046579,GO:0046649,GO:0046661,GO:0046666,GO:0046667,GO:0046843,GO:0046849,GO:0046903,GO:0048052,GO:0048056,GO:0048138,GO:0048139,GO:0048190,GO:0048468,GO:0048469,GO:0048477,GO:0048513,GO:0048514,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048542,GO:0048546,GO:0048562,GO:0048563,GO:0048565,GO:0048568,GO:0048569,GO:0048580,GO:0048581,GO:0048583,GO:0048584,GO:0048585,GO:0048589,GO:0048592,GO:0048593,GO:0048598,GO:0048599,GO:0048608,GO:0048609,GO:0048619,GO:0048645,GO:0048646,GO:0048663,GO:0048666,GO:0048667,GO:0048699,GO:0048707,GO:0048729,GO:0048731,GO:0048732,GO:0048736,GO:0048737,GO:0048749,GO:0048771,GO:0048803,GO:0048805,GO:0048806,GO:0048808,GO:0048812,GO:0048856,GO:0048858,GO:0048859,GO:0048863,GO:0048864,GO:0048865,GO:0048867,GO:0048869,GO:0048870,GO:0048871,GO:0048872,GO:0050663,GO:0050673,GO:0050767,GO:0050768,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0050877,GO:0050890,GO:0050896,GO:0051056,GO:0051057,GO:0051059,GO:0051093,GO:0051094,GO:0051128,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051193,GO:0051196,GO:0051234,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051301,GO:0051489,GO:0051674,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0051890,GO:0051960,GO:0051961,GO:0051962,GO:0055123,GO:0060089,GO:0060173,GO:0060249,GO:0060250,GO:0060255,GO:0060284,GO:0060288,GO:0060289,GO:0060411,GO:0060413,GO:0060429,GO:0060491,GO:0060537,GO:0060538,GO:0060541,GO:0060548,GO:0060562,GO:0060571,GO:0060581,GO:0060582,GO:0060674,GO:0060972,GO:0061005,GO:0061008,GO:0061009,GO:0061061,GO:0061073,GO:0061311,GO:0061314,GO:0061318,GO:0061326,GO:0061331,GO:0061333,GO:0061351,GO:0061371,GO:0061382,GO:0061437,GO:0061438,GO:0061439,GO:0061440,GO:0061458,GO:0061525,GO:0061564,GO:0062012,GO:0065007,GO:0065008,GO:0070013,GO:0070161,GO:0070302,GO:0070303,GO:0070372,GO:0070374,GO:0070986,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0072001,GO:0072002,GO:0072006,GO:0072009,GO:0072010,GO:0072012,GO:0072014,GO:0072015,GO:0072073,GO:0072080,GO:0072089,GO:0072091,GO:0072102,GO:0072103,GO:0072104,GO:0072112,GO:0072310,GO:0072311,GO:0072358,GO:0072359,GO:0072574,GO:0072575,GO:0072576,GO:0072602,GO:0080090,GO:0080134,GO:0080135,GO:0090068,GO:0090092,GO:0090100,GO:0090130,GO:0090132,GO:0090287,GO:0090304,GO:0090596,GO:0090598,GO:0097028,GO:0097150,GO:0097435,GO:0097485,GO:0097659,GO:0097708,GO:0098542,GO:0098588,GO:0098609,GO:0098727,GO:0098742,GO:0098791,GO:0098796,GO:0098797,GO:0098827,GO:0120025,GO:0120032,GO:0120035,GO:0120036,GO:0120039,GO:1900087,GO:1900371,GO:1900542,GO:1901214,GO:1901216,GO:1901360,GO:1901362,GO:1901576,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902105,GO:1902107,GO:1902531,GO:1902532,GO:1902533,GO:1902679,GO:1902680,GO:1902692,GO:1902806,GO:1902808,GO:1903010,GO:1903506,GO:1903507,GO:1903508,GO:1903578,GO:1903706,GO:1903707,GO:1903708,GO:1905207,GO:1905314,GO:1990705,GO:2000026,GO:2000027,GO:2000043,GO:2000045,GO:2000047,GO:2000048,GO:2000112,GO:2000113,GO:2000177,GO:2000179,GO:2000648,GO:2000736,GO:2001013,GO:2001141,GO:2001169,GO:2001204 - 0.0003125 53.0
DYD3_k127_6933511_3 Pectate lyase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008761 503.0
DYD3_k127_6933511_4 protein containing a von Willebrand factor type A (vWA) domain K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 452.0
DYD3_k127_6933511_5 protein containing a von Willebrand factor type A (vWA) domain K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003965 410.0
DYD3_k127_6933511_6 Domain of unknown function (DUF4215) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001547 371.0
DYD3_k127_6933511_7 Oxygen tolerance - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007692 351.0
DYD3_k127_6933511_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006379 326.0
DYD3_k127_6933511_9 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006343 309.0
DYD3_k127_6947826_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003722 599.0
DYD3_k127_6947826_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006105 569.0
DYD3_k127_6947826_10 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000005809 213.0
DYD3_k127_6947826_11 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000003229 204.0
DYD3_k127_6947826_12 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000006362 203.0
DYD3_k127_6947826_13 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000000000000000005013 192.0
DYD3_k127_6947826_14 binds to the 23S rRNA K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000000000009204 191.0
DYD3_k127_6947826_15 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000000000000002715 183.0
DYD3_k127_6947826_16 Ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000000000000006707 192.0
DYD3_k127_6947826_17 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000001518 167.0
DYD3_k127_6947826_18 protein with SCP PR1 domains - - - 0.000000000000000000000000000000000000000001337 163.0
DYD3_k127_6947826_19 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000003621 147.0
DYD3_k127_6947826_2 GAF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000309 514.0
DYD3_k127_6947826_20 acylphosphatase activity K01512 GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818 3.6.1.7 0.0000000000000000000000000000000000002331 145.0
DYD3_k127_6947826_21 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000008037 112.0
DYD3_k127_6947826_22 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000001834 116.0
DYD3_k127_6947826_23 HDOD domain - - - 0.0000000000000000000005639 106.0
DYD3_k127_6947826_24 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000003835 102.0
DYD3_k127_6947826_25 Ribosomal protein L30 K02907 - - 0.000000000000001603 90.0
DYD3_k127_6947826_26 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.00000000000002292 72.0
DYD3_k127_6947826_27 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877 - 0.000000001415 61.0
DYD3_k127_6947826_28 glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000007625 51.0
DYD3_k127_6947826_29 Belongs to the universal ribosomal protein uL29 family K02904 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000007749 61.0
DYD3_k127_6947826_3 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007296 399.0
DYD3_k127_6947826_30 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.0000375 54.0
DYD3_k127_6947826_4 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001661 295.0
DYD3_k127_6947826_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003573 303.0
DYD3_k127_6947826_6 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001085 269.0
DYD3_k127_6947826_7 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002011 265.0
DYD3_k127_6947826_8 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 GO:0003674,GO:0003824,GO:0004017,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000008724 250.0
DYD3_k127_6947826_9 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000006954 212.0
DYD3_k127_6958801_0 Glutamine synthetase type III K01915 - 6.3.1.2 3.057e-303 946.0
DYD3_k127_6958801_1 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 3.874e-278 869.0
DYD3_k127_6958801_10 Belongs to the glycosyl hydrolase family 6 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007578 561.0
DYD3_k127_6958801_11 Protein of unknown function (DUF3341) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003014 435.0
DYD3_k127_6958801_12 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002694 430.0
DYD3_k127_6958801_13 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 392.0
DYD3_k127_6958801_14 D-alanyl-D-alanine carboxypeptidase K07259 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001339 377.0
DYD3_k127_6958801_15 ABC-type Zn2 transport system, periplasmic component surface adhesin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 349.0
DYD3_k127_6958801_16 Cytochrome c7 and related cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 316.0
DYD3_k127_6958801_17 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007452 320.0
DYD3_k127_6958801_18 Heme copper-type cytochrome quinol oxidase, subunit K02276 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001477 287.0
DYD3_k127_6958801_19 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001339 266.0
DYD3_k127_6958801_2 Molybdopterin oxidoreductase, iron-sulfur binding subunit K00184 - - 6.13e-278 893.0
DYD3_k127_6958801_20 protein SCO1 SenC PrrC involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007457 273.0
DYD3_k127_6958801_21 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000008416 271.0
DYD3_k127_6958801_22 Protein kinase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007766 280.0
DYD3_k127_6958801_23 PilZ domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000008116 248.0
DYD3_k127_6958801_24 enterobactin catabolic process K07214 - - 0.0000000000000000000000000000000000000000000000000000000001365 218.0
DYD3_k127_6958801_25 short chain amide porin - - - 0.00000000000000000000000000000000000000000000000002708 198.0
DYD3_k127_6958801_27 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.000000000000000000000000000000000005563 139.0
DYD3_k127_6958801_28 Thioredoxin - - - 0.00000000000000000000000000000000004063 147.0
DYD3_k127_6958801_29 ABC transporter substrate-binding protein K02058 - - 0.000000000000000000000000000000002475 134.0
DYD3_k127_6958801_3 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 4.395e-237 749.0
DYD3_k127_6958801_31 Prokaryotic Cytochrome C oxidase subunit IV K02277 - 1.9.3.1 0.00000000000000007152 91.0
DYD3_k127_6958801_32 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000001933 85.0
DYD3_k127_6958801_35 zinc-ribbon domain - - - 0.000000001179 70.0
DYD3_k127_6958801_37 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07497 - - 0.00000001116 63.0
DYD3_k127_6958801_39 transposition K07483,K07497 - - 0.000009638 51.0
DYD3_k127_6958801_4 Thioredoxin - - - 5.744e-236 753.0
DYD3_k127_6958801_40 PFAM Protein kinase domain K08309 - - 0.00008576 51.0
DYD3_k127_6958801_5 Polysulphide reductase K00185 - - 9.507e-212 666.0
DYD3_k127_6958801_6 Protein kinase; unclassified specificity. K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002265 626.0
DYD3_k127_6958801_7 drug transmembrane transporter activity K03327 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007292 583.0
DYD3_k127_6958801_8 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004547 566.0
DYD3_k127_6958801_9 long-chain fatty acid transporting porin activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 555.0
DYD3_k127_6961112_0 Diguanylate cyclase - - - 3.092e-212 694.0
DYD3_k127_6961112_1 Aldehyde dehydrogenase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008639 602.0
DYD3_k127_6961112_2 PFAM glutamine synthetase catalytic region K01915 - 6.3.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004291 582.0
DYD3_k127_6961112_3 Sugar (and other) transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 427.0
DYD3_k127_6961112_4 Alcohol dehydrogenase class IV - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002748 425.0
DYD3_k127_6961112_5 Serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002231 331.0
DYD3_k127_6961112_6 Serine acetyltransferase K00640 - 2.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003313 274.0
DYD3_k127_6961112_7 GDP-mannose 4,6 dehydratase K18981 - 1.1.1.203 0.0000000000000000000000005579 120.0
DYD3_k127_6961112_8 HAD-hyrolase-like - - - 0.0000000000000000000001153 113.0
DYD3_k127_6961112_9 Glutathione S-transferase, N-terminal domain - - - 0.00000001744 64.0
DYD3_k127_6969438_0 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 3.969e-245 775.0
DYD3_k127_6969438_1 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007604 499.0
DYD3_k127_6969438_2 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962,K01963 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006829 457.0
DYD3_k127_6969438_3 Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system K02045 - 3.6.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006098 433.0
DYD3_k127_6969438_4 Binding-protein-dependent transport system inner membrane component K02047 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006804 301.0
DYD3_k127_6969438_5 - - - - 0.0000000000000000000001847 112.0
DYD3_k127_696993_0 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006621 608.0
DYD3_k127_696993_1 protein secretion by the type III secretion system K02412,K03224 - 3.6.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008341 436.0
DYD3_k127_696993_10 Flagellar basal body rod FlgEFG protein C-terminal K02392 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002573 283.0
DYD3_k127_696993_11 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000038 247.0
DYD3_k127_696993_12 Plays a role in the flagellum-specific transport system K02419 - - 0.00000000000000000000000000000000000000000000000000000000000002543 224.0
DYD3_k127_696993_13 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02401 - - 0.0000000000000000000000000000000000000000000000007966 193.0
DYD3_k127_696993_14 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes K02405 - - 0.000000000000000000000000000000000000000000001289 178.0
DYD3_k127_696993_15 flagellar motor switch protein FliG K02410 - - 0.00000000000000000000000000000000000000000002743 174.0
DYD3_k127_696993_16 Belongs to the flagella basal body rod proteins family K02388 - - 0.000000000000000000000000000000000000127 153.0
DYD3_k127_696993_17 PFAM GTP-binding signal recognition particle SRP54 G- domain K02404 - - 0.000000000000000000000000000000000009691 150.0
DYD3_k127_696993_18 Required for flagellar hook formation. May act as a scaffolding protein K02389 - - 0.000000000000000000000000000007086 134.0
DYD3_k127_696993_19 HDOD domain - - - 0.00000000000000000000003511 116.0
DYD3_k127_696993_2 Flagellar hook protein FlgE K02390 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004297 384.0
DYD3_k127_696993_20 Type III flagellar switch regulator (C-ring) FliN C-term K02417 - - 0.000000000000000000001281 104.0
DYD3_k127_696993_21 Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum K13626 - - 0.00000000000004304 83.0
DYD3_k127_696993_22 Flagellar biosynthetic protein FliQ K02420 - - 0.00000000007646 70.0
DYD3_k127_696993_23 Role in flagellar biosynthesis K02421 - - 0.0000000002385 72.0
DYD3_k127_696993_24 Flagellar hook-basal body complex protein FliE K02408 - - 0.0000000002508 64.0
DYD3_k127_696993_25 Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body K02387 - - 0.000000001184 66.0
DYD3_k127_696993_27 PFAM Flagellar assembly protein FliH Type III secretion system HrpE K02411 - - 0.00000006604 64.0
DYD3_k127_696993_28 Histidine kinase - - - 0.00001123 50.0
DYD3_k127_696993_29 FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02416 - - 0.00003987 55.0
DYD3_k127_696993_3 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 372.0
DYD3_k127_696993_30 Flagellar biosynthesis protein, FliO K02418 - - 0.00005781 55.0
DYD3_k127_696993_4 Histidine kinase K03320 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005296 364.0
DYD3_k127_696993_5 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001736 347.0
DYD3_k127_696993_6 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002736 322.0
DYD3_k127_696993_7 HDOD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003003 316.0
DYD3_k127_696993_8 The M ring may be actively involved in energy transduction K02409 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001958 303.0
DYD3_k127_696993_9 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006014 310.0
DYD3_k127_701892_0 HD domain - - - 3.282e-243 771.0
DYD3_k127_701892_1 Belongs to the aldehyde dehydrogenase family K13821 - 1.2.1.88,1.5.5.2 1.38e-234 772.0
DYD3_k127_701892_10 3-beta hydroxysteroid dehydrogenase/isomerase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005031 283.0
DYD3_k127_701892_11 long-chain fatty acid transporting porin activity - - - 0.0000000000000000000000000000000000000000000000000000000000000007885 239.0
DYD3_k127_701892_12 Belongs to the glycosyl hydrolase family 6 - - - 0.00000000000000000000000000000000000000000000000001982 201.0
DYD3_k127_701892_13 PFAM Class I peptide chain release factor K15034 - - 0.0000000000000000000000000000000000004704 150.0
DYD3_k127_701892_14 Glutathione S-transferase K00799 - 2.5.1.18 0.000000000000000001775 93.0
DYD3_k127_701892_17 DNA-templated transcription, initiation - - - 0.000003157 59.0
DYD3_k127_701892_2 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000681 567.0
DYD3_k127_701892_3 Belongs to the glycosyl hydrolase 28 family K15532 - 3.2.1.172 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002553 493.0
DYD3_k127_701892_4 Belongs to the mandelate racemase muconate lactonizing enzyme family K19802 - 5.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 473.0
DYD3_k127_701892_5 Histidine kinase K13598 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 444.0
DYD3_k127_701892_6 Transglutaminase-like superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 435.0
DYD3_k127_701892_7 PhoH-like protein K06217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007178 399.0
DYD3_k127_701892_8 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007373 362.0
DYD3_k127_701892_9 Cell division protein FtsI penicillin-binding protein 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 341.0
DYD3_k127_7079272_0 glucose-6-phosphate isomerase activity K01810 - 5.3.1.9 4.327e-251 788.0
DYD3_k127_7079272_1 Receptor - - - 7.098e-201 657.0
DYD3_k127_7079272_2 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001454 343.0
DYD3_k127_7079272_3 Protein serine threonine phosphatase K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000002181 256.0
DYD3_k127_7079272_4 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003187 254.0
DYD3_k127_7079272_5 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000001555 246.0
DYD3_k127_7079272_6 Family membership K08884 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000136 250.0
DYD3_k127_7079272_7 HIT domain K02503 - - 0.00000000000000000000000000000000000000000000000000001364 191.0
DYD3_k127_7079272_8 - - - - 0.00000000000000000000000000000000000000000000003937 188.0
DYD3_k127_7079272_9 Lytic polysaccharide mono-oxygenase, cellulose-degrading - - - 0.000000000000000000000000000000001137 142.0
DYD3_k127_7092036_0 ABC-type transport system involved in lipoprotein release permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005959 592.0
DYD3_k127_7092036_1 ThiF family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009758 584.0
DYD3_k127_7092036_10 - - - - 0.000000000000000009592 95.0
DYD3_k127_7092036_11 peptidyl-tyrosine sulfation - - - 0.00000000000001517 85.0
DYD3_k127_7092036_12 UBA THIF-type NAD FAD binding - - - 0.000000000006163 71.0
DYD3_k127_7092036_13 membrane protein (DUF2078) K08982 - - 0.0000005975 53.0
DYD3_k127_7092036_2 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009289 310.0
DYD3_k127_7092036_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009805 274.0
DYD3_k127_7092036_4 Domain of unknown function DUF302 - - - 0.000000000000000000000000000000000000003318 151.0
DYD3_k127_7092036_5 DNA-templated transcription, initiation K03088 GO:0000988,GO:0000990,GO:0002791,GO:0003674,GO:0006355,GO:0006950,GO:0008150,GO:0009266,GO:0009405,GO:0009408,GO:0009628,GO:0009889,GO:0010468,GO:0010556,GO:0010565,GO:0016987,GO:0019216,GO:0019217,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0032879,GO:0032880,GO:0043254,GO:0044087,GO:0044419,GO:0050708,GO:0050789,GO:0050794,GO:0050896,GO:0051046,GO:0051049,GO:0051128,GO:0051171,GO:0051223,GO:0051252,GO:0051704,GO:0060255,GO:0062012,GO:0065007,GO:0070201,GO:0080090,GO:0090087,GO:0140110,GO:1903506,GO:1903530,GO:2000112,GO:2000142,GO:2001141 - 0.000000000000000000000000000000000000008047 153.0
DYD3_k127_7092036_6 - - - - 0.00000000000000000000000000000001639 137.0
DYD3_k127_7092036_7 Astacin (Peptidase family M12A) - - - 0.0000000000000000000000000000001973 138.0
DYD3_k127_7092036_8 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.000000000000000000000000000006971 122.0
DYD3_k127_7092036_9 Belongs to the peptidase S1B family - - - 0.0000000000000000000004581 108.0
DYD3_k127_7104469_0 Converts the aldose L-fucose into the corresponding ketose L-fuculose - - - 9.635e-245 764.0
DYD3_k127_7104469_1 ABC transporter K06147,K18889 - - 5.377e-200 640.0
DYD3_k127_7104469_10 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 411.0
DYD3_k127_7104469_11 Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system K02056,K10441 - 3.6.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008157 367.0
DYD3_k127_7104469_12 arsenite transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008482 357.0
DYD3_k127_7104469_13 Branched-chain amino acid transport system / permease component K02057 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007958 341.0
DYD3_k127_7104469_14 fatty acid desaturase K00507 - 1.14.19.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003853 323.0
DYD3_k127_7104469_15 Protein of unknown function (DUF1592) - - - 0.000000000000000000000002248 117.0
DYD3_k127_7104469_16 - - - - 0.000000000000000000009805 97.0
DYD3_k127_7104469_17 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.00000000001531 74.0
DYD3_k127_7104469_18 Universal stress protein - - - 0.00000000001609 71.0
DYD3_k127_7104469_19 Acetyltransferase (GNAT) domain - - - 0.0000000000792 72.0
DYD3_k127_7104469_2 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 2.876e-196 631.0
DYD3_k127_7104469_3 ABC transporter transmembrane region K06147,K18890 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006462 631.0
DYD3_k127_7104469_4 FGGY family of carbohydrate kinases, N-terminal domain K00853 - 2.7.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002379 557.0
DYD3_k127_7104469_5 Ammonium Transporter K03320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002655 529.0
DYD3_k127_7104469_6 von Willebrand factor (vWF) type A domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 535.0
DYD3_k127_7104469_7 ammonium transporter K03320 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006021 518.0
DYD3_k127_7104469_8 Saccharopine dehydrogenase C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001458 482.0
DYD3_k127_7104469_9 Periplasmic binding protein domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 412.0
DYD3_k127_7115829_0 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002785 562.0
DYD3_k127_7115829_1 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 491.0
DYD3_k127_7115829_2 GDSL-like Lipase/Acylhydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002808 312.0
DYD3_k127_7115829_3 Pfam Zn-finger in ubiquitin-hydrolases and other protein - - - 0.00000000000000000000000000001785 121.0
DYD3_k127_7115829_4 Belongs to the glycosyl hydrolase 5 (cellulase A) family K01190 - 3.2.1.23 0.00000000008491 72.0
DYD3_k127_7132622_0 Transglutaminase/protease-like homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007144 451.0
DYD3_k127_7132622_1 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000924 427.0
DYD3_k127_7132622_12 Tetratricopeptide repeat - - - 0.00000000000002227 85.0
DYD3_k127_7132622_13 Domain of unknown function (DUF4880) K07165 - - 0.0000000004501 72.0
DYD3_k127_7132622_2 Diguanylate cyclase, GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002699 395.0
DYD3_k127_7132622_3 proteasome-type protease K07395 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 347.0
DYD3_k127_7132622_4 N-formylglutamate amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004518 281.0
DYD3_k127_7132622_5 Domain of unknown function (DUF4388) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006306 289.0
DYD3_k127_7132622_6 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000002168 235.0
DYD3_k127_7132622_7 Specifically catalyzes the N1-methylation of pseudouridine at position 54 (Psi54) in tRNAs K16317 - 2.1.1.257 0.000000000000000000000000000000000001033 156.0
DYD3_k127_7132622_8 DNA-templated transcription, initiation K03088 GO:0000988,GO:0000990,GO:0002791,GO:0003674,GO:0006355,GO:0006950,GO:0008150,GO:0009266,GO:0009405,GO:0009408,GO:0009628,GO:0009889,GO:0010468,GO:0010556,GO:0010565,GO:0016987,GO:0019216,GO:0019217,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0032879,GO:0032880,GO:0043254,GO:0044087,GO:0044419,GO:0050708,GO:0050789,GO:0050794,GO:0050896,GO:0051046,GO:0051049,GO:0051128,GO:0051171,GO:0051223,GO:0051252,GO:0051704,GO:0060255,GO:0062012,GO:0065007,GO:0070201,GO:0080090,GO:0090087,GO:0140110,GO:1903506,GO:1903530,GO:2000112,GO:2000142,GO:2001141 - 0.0000000000000000000000000000000001979 141.0
DYD3_k127_7132622_9 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000175 123.0
DYD3_k127_7165610_0 Large family of predicted nucleotide-binding domains K07175 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 595.0
DYD3_k127_7165610_1 heat shock protein binding K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003597 344.0
DYD3_k127_7165610_2 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 - 3.6.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007542 302.0
DYD3_k127_7165610_3 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003942 272.0
DYD3_k127_7165610_4 phosphorelay signal transduction system K02282,K20971 - - 0.00000000000000000000000000000000000000000000007935 182.0
DYD3_k127_7165610_5 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000007207 182.0
DYD3_k127_7165610_6 TIGRFAM 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 - 2.7.6.3 0.0000000000000000000000000000000000000008272 158.0
DYD3_k127_7165610_7 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.0000000000000000000000000000000000000648 151.0
DYD3_k127_7165610_8 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.00000000000000000000000000001648 127.0
DYD3_k127_7165610_9 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.000000000000000000000000004466 121.0
DYD3_k127_7167297_0 Anion-transporting ATPase K01551 - 3.6.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003809 299.0
DYD3_k127_7167297_1 ABC transporter ATP-binding protein K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003871 299.0
DYD3_k127_7167297_2 TIGRFAM Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000001813 199.0
DYD3_k127_7167297_3 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.0000000000000000000000000000000000000000000495 175.0
DYD3_k127_7167297_5 transport system, permease component K01992 - - 0.0000000000000000000000982 109.0
DYD3_k127_7167297_6 ABC-2 family transporter protein K01992 - - 0.0000000000000000000004805 111.0
DYD3_k127_7167297_7 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.00000000000001304 80.0
DYD3_k127_7167297_8 - - - - 0.0001063 47.0
DYD3_k127_7169144_0 Cytochrome c-type biogenesis protein K02198 - - 1.129e-287 902.0
DYD3_k127_7169144_1 lysine 2,3-aminomutase K01843 - 5.4.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007775 545.0
DYD3_k127_7169144_2 Catalyzes the reversible phosphorylation of UMP to UDP K09903 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 346.0
DYD3_k127_7169144_3 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03769,K03770 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000001357 271.0
DYD3_k127_7169144_4 - - - - 0.0000000000000000000000000003052 129.0
DYD3_k127_7171271_0 Glutamate synthase central domain K00265,K00284 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006541,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0015930,GO:0016020,GO:0016053,GO:0016491,GO:0016638,GO:0019676,GO:0019740,GO:0019752,GO:0040007,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.13,1.4.1.14,1.4.7.1 0.0 1836.0
DYD3_k127_7171271_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.0 1270.0
DYD3_k127_7171271_10 Forkhead associated domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003191 364.0
DYD3_k127_7171271_11 Fic/DOC family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002001 346.0
DYD3_k127_7171271_12 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001965 288.0
DYD3_k127_7171271_13 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000000108 269.0
DYD3_k127_7171271_14 DNA methylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000003422 242.0
DYD3_k127_7171271_15 Serine Threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000005404 231.0
DYD3_k127_7171271_16 SAM-dependent RNA methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000003058 212.0
DYD3_k127_7171271_17 Bacterial lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.00000000000000000000000000000000000000000000000006766 198.0
DYD3_k127_7171271_18 Putative restriction endonuclease - - - 0.0000000000000000000000000000000000000000000001991 173.0
DYD3_k127_7171271_2 Glutamate synthase K00266 - 1.4.1.13,1.4.1.14 1.418e-200 636.0
DYD3_k127_7171271_21 Polymer-forming cytoskeletal - - - 0.00000000000000000000000000000000000002052 149.0
DYD3_k127_7171271_22 TonB-dependent Receptor Plug Domain K02014 - - 0.00000000000000000000000000000000000007168 158.0
DYD3_k127_7171271_23 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000003197 141.0
DYD3_k127_7171271_24 TonB-dependent Receptor Plug Domain K02014 - - 0.000000000000000000000000000003079 135.0
DYD3_k127_7171271_25 Protein conserved in bacteria - - - 0.00000000000000000000000000002186 138.0
DYD3_k127_7171271_26 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000004199 129.0
DYD3_k127_7171271_27 negative regulation of translational initiation - - - 0.0000000000000000000000000001113 127.0
DYD3_k127_7171271_28 - - - - 0.0000000000000000000001455 106.0
DYD3_k127_7171271_29 PFAM methyltransferase K15460 - 2.1.1.223 0.000000000000000000008477 108.0
DYD3_k127_7171271_3 Pectate lyase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 531.0
DYD3_k127_7171271_30 Belongs to the UPF0109 family K06960 - - 0.00000000000000000007179 91.0
DYD3_k127_7171271_31 iron-sulfur cluster assembly K07126,K13819 - - 0.0000000000000000008654 88.0
DYD3_k127_7171271_32 Carbohydrate binding module (family 35) - - - 0.00000000000000002347 93.0
DYD3_k127_7171271_33 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000001196 81.0
DYD3_k127_7171271_35 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.00000000000006664 81.0
DYD3_k127_7171271_36 Ketosteroid isomerase-related protein - - - 0.0000000000005988 76.0
DYD3_k127_7171271_37 Tetratricopeptide repeat - - - 0.0000002224 63.0
DYD3_k127_7171271_4 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003256 508.0
DYD3_k127_7171271_40 - - - - 0.00000391 61.0
DYD3_k127_7171271_41 regulation of response to stimulus K13730 - - 0.00007059 52.0
DYD3_k127_7171271_42 Pregnancy-associated plasma protein-A - - - 0.0004098 54.0
DYD3_k127_7171271_5 two component, sigma54 specific, transcriptional regulator, Fis family K07713,K07714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005083 456.0
DYD3_k127_7171271_6 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005554 430.0
DYD3_k127_7171271_7 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002503 438.0
DYD3_k127_7171271_8 Methionine aminopeptidase K01265 - 3.4.11.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006674 379.0
DYD3_k127_7171271_9 glutamine-fructose-6-phosphate transaminase (isomerizing) activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002596 385.0
DYD3_k127_7178840_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1253.0
DYD3_k127_7178840_1 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 1.288e-254 812.0
DYD3_k127_7178840_10 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009837 325.0
DYD3_k127_7178840_11 Protein of unknown function (DUF790) K09744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000265 311.0
DYD3_k127_7178840_12 Zinc-dependent metalloprotease - - - 0.00000000000000000000000000000000000000000000000000005258 206.0
DYD3_k127_7178840_13 Tetratricopeptide repeat - - - 0.0000000000000000000000000000008191 134.0
DYD3_k127_7178840_14 PFAM macrophage migration inhibitory factor - - - 0.00000000000000000000000000002696 120.0
DYD3_k127_7178840_15 - - - - 0.000000000000000000000002239 112.0
DYD3_k127_7178840_16 - - - - 0.000007525 49.0
DYD3_k127_7178840_2 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 2.189e-232 722.0
DYD3_k127_7178840_3 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007166 499.0
DYD3_k127_7178840_4 Protein of unknown function (DUF3237) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007892 421.0
DYD3_k127_7178840_5 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003062 407.0
DYD3_k127_7178840_6 twitching motility protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003296 404.0
DYD3_k127_7178840_7 protoporphyrinogen oxidase activity K00231,K14266 - 1.14.19.9,1.3.3.15,1.3.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003594 374.0
DYD3_k127_7178840_8 NUBPL iron-transfer P-loop NTPase K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002538 334.0
DYD3_k127_7178840_9 Belongs to the ParB family K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 337.0
DYD3_k127_7192777_0 RNA polymerase sigma factor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004499 537.0
DYD3_k127_7192777_1 Sodium/hydrogen exchanger family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001869 483.0
DYD3_k127_7192777_2 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000472 342.0
DYD3_k127_7192777_3 mechanosensitive ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005055 359.0
DYD3_k127_7192777_4 Putative zinc-finger K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 338.0
DYD3_k127_7192777_5 Sodium/hydrogen exchanger family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005563 304.0
DYD3_k127_7192777_6 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004394 248.0
DYD3_k127_7192777_7 Belongs to the thioredoxin family K03671,K03672 - 1.8.1.8 0.00000000000000000000000000000000000000000004299 164.0
DYD3_k127_7192777_8 - - - - 0.0000000000000000000000000000000000000000289 161.0
DYD3_k127_7192777_9 domain protein - - - 0.000000000000000000000000000002516 125.0
DYD3_k127_7212171_0 ABC transporter K06147,K06148 - - 6.929e-240 756.0
DYD3_k127_7212171_1 Ammonium Transporter K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 501.0
DYD3_k127_7212171_10 Phosphorylase superfamily K01243 - 3.2.2.9 0.00000000000000000000000000000000000000000004011 167.0
DYD3_k127_7212171_11 Zinc metalloprotease (Elastase) K01183,K20274 - 3.2.1.14 0.000000000000000000000000000000000000003883 168.0
DYD3_k127_7212171_12 diguanylate cyclase - - - 0.000000000000000000000000000000002125 140.0
DYD3_k127_7212171_13 Concanavalin A-like lectin/glucanases superfamily - - - 0.00000000000000000000002016 110.0
DYD3_k127_7212171_14 COGs COG2114 Adenylate cyclase family 3 (some protein contain HAMP domain) - - - 0.00000000000001046 77.0
DYD3_k127_7212171_15 protein-glutamate methylesterase activity K03412,K03413,K18876 GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0097159,GO:1901363 3.1.1.61,3.5.1.44 0.0000000000001906 80.0
DYD3_k127_7212171_16 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 0.000000000005434 70.0
DYD3_k127_7212171_17 Trehalose utilisation K09992 - - 0.0000008043 55.0
DYD3_k127_7212171_18 Domain of unknown function (DUF4340) - - - 0.00001576 58.0
DYD3_k127_7212171_19 Roadblock/LC7 domain K07131 - - 0.00007186 53.0
DYD3_k127_7212171_2 Sodium:dicarboxylate symporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 449.0
DYD3_k127_7212171_3 Belongs to the D-alanine--D-alanine ligase family K01921,K01955 - 6.3.2.4,6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000242 432.0
DYD3_k127_7212171_4 Fatty acid desaturase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001433 379.0
DYD3_k127_7212171_5 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002934 366.0
DYD3_k127_7212171_6 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003706 348.0
DYD3_k127_7212171_7 ABC-type uncharacterized transport system K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006472 359.0
DYD3_k127_7212171_8 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000157 290.0
DYD3_k127_737508_0 Sodium/hydrogen exchanger family K03455,K11745,K11747 - - 1.407e-208 674.0
DYD3_k127_737508_1 Outer membrane lipoprotein-sorting protein K07003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000672 482.0
DYD3_k127_737508_2 PFAM response regulator receiver K07657 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 316.0
DYD3_k127_737508_3 PFAM response regulator receiver K07657 - - 0.000000000000000000000000000000000000000000000000000000000004108 210.0
DYD3_k127_737508_4 NADPH-quinone reductase (modulator of drug activity B) K00355,K11746,K11748 - 1.6.5.2 0.000000000000000000000000000000000000000000000000000000000004558 213.0
DYD3_k127_737508_5 Two component transcriptional regulator, winged helix family K07657 - - 0.0000000000000000000000002778 117.0
DYD3_k127_737508_6 Histidine kinase K07636 - 2.7.13.3 0.00000003861 56.0
DYD3_k127_740894_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 5.484e-225 725.0
DYD3_k127_740894_2 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003976 461.0
DYD3_k127_740894_3 Cation efflux family K16264 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005796 289.0
DYD3_k127_740894_4 R3H domain K06346 - - 0.00000000000000000000000000000000000000000000000000000000000003618 222.0
DYD3_k127_740894_5 Collagen-binding surface adhesin SpaP (antigen I II family) K07337 - - 0.000000000000000000000000000000000000000000000000000000005363 204.0
DYD3_k127_740894_6 Protein conserved in bacteria K09859 - - 0.00000000000000000000000000000000002393 153.0
DYD3_k127_740894_7 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K10943 - - 0.00000000000000003757 87.0
DYD3_k127_771022_0 Hydrolase K20444 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009124 450.0
DYD3_k127_771022_1 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000002499 215.0
DYD3_k127_771022_2 acid phosphatase activity - - - 0.000000000000000000000000000000000000000000000000000000002125 210.0
DYD3_k127_771022_4 Belongs to the glycosyl hydrolase 5 (cellulase A) family K01179 - 3.2.1.4 0.0000001081 63.0
DYD3_k127_814671_0 Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 - 3.4.21.26 4.431e-199 657.0
DYD3_k127_814671_1 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007725 612.0
DYD3_k127_814671_10 ErfK ybiS ycfS ynhG family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000004747 251.0
DYD3_k127_814671_11 Forkhead associated domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000001056 246.0
DYD3_k127_814671_12 Thioredoxin - - - 0.00000000000000000000000000000000000000000000007532 187.0
DYD3_k127_814671_13 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000001396 159.0
DYD3_k127_814671_14 Beta-L-arabinofuranosidase, GH127 - - - 0.0000000000000000000000000007715 127.0
DYD3_k127_814671_15 Protein of unknown function (DUF1109) - - - 0.0000001318 62.0
DYD3_k127_814671_16 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase K02395 - - 0.000000392 59.0
DYD3_k127_814671_2 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007698 575.0
DYD3_k127_814671_3 NUBPL iron-transfer P-loop NTPase K04562 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003146 514.0
DYD3_k127_814671_4 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000832 454.0
DYD3_k127_814671_5 PFAM Glycosyl transferase family 2 K20534 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007365 323.0
DYD3_k127_814671_6 Serine Threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004127 315.0
DYD3_k127_814671_7 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342,K10857 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000001732 260.0
DYD3_k127_814671_8 Thioredoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001774 264.0
DYD3_k127_814671_9 Protein kinase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004796 272.0
DYD3_k127_827333_0 Tfp pilus assembly protein tip-associated adhesin K02674 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002701 638.0
DYD3_k127_827333_1 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000374 537.0
DYD3_k127_827333_10 PPIC-type PPIASE domain - - - 0.000000000000000000000000000001614 127.0
DYD3_k127_827333_13 protein transport across the cell outer membrane K02246,K08084 - - 0.00000000000000001263 91.0
DYD3_k127_827333_14 type IV pilus modification protein PilV K02671,K02681 - - 0.00000000000223 79.0
DYD3_k127_827333_2 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003738 499.0
DYD3_k127_827333_3 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 402.0
DYD3_k127_827333_4 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003464 299.0
DYD3_k127_827333_5 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000000000000000000000000001212 212.0
DYD3_k127_827333_7 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000000000000000008313 174.0
DYD3_k127_827333_8 pilus assembly protein PilW K02672 - - 0.000000000000000000000000000000000000000000003041 183.0
DYD3_k127_827333_9 peptidyl-prolyl cis-trans isomerase activity K03769,K03770,K07533 - 5.2.1.8 0.0000000000000000000000000000002195 132.0
DYD3_k127_832683_0 protein involved in exopolysaccharide biosynthesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007869 625.0
DYD3_k127_832683_1 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003689 552.0
DYD3_k127_832683_10 VanW like protein - - - 0.00000000000000000000000000000000000000000000000000000000002098 228.0
DYD3_k127_832683_11 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000002083 204.0
DYD3_k127_832683_12 iron ion homeostasis - - - 0.0000000000000000000000000000000000000000003568 175.0
DYD3_k127_832683_13 Mate efflux family protein K03327 - - 0.000000000000000000000000000000000000000002831 174.0
DYD3_k127_832683_15 cellulose binding - - - 0.00000000000000000000000000000005146 146.0
DYD3_k127_832683_18 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.00000002085 59.0
DYD3_k127_832683_2 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase K00322 - 1.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002555 445.0
DYD3_k127_832683_20 - - - - 0.00008585 53.0
DYD3_k127_832683_3 RNA-DNA hybrid ribonuclease activity K03470 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004198 352.0
DYD3_k127_832683_4 depolymerase K03932 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004288 340.0
DYD3_k127_832683_5 Phosphomannose isomerase type I K01809,K01840 - 5.3.1.8,5.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009332 344.0
DYD3_k127_832683_6 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003431 261.0
DYD3_k127_832683_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000001811 247.0
DYD3_k127_832683_9 Copper amine oxidase N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000003926 220.0
DYD3_k127_844225_0 Belongs to the glycosyl hydrolase 35 family K12308 - 3.2.1.23 2.456e-223 713.0
DYD3_k127_844225_1 copper-translocating P-type ATPase K01534 - 3.6.3.3,3.6.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002762 505.0
DYD3_k127_844225_10 Belongs to the SUA5 family K07566 - 2.7.7.87 0.000000000000000000000000000000000000000000000000000000000000000000000000001158 261.0
DYD3_k127_844225_11 Periplasmic binding protein domain K10439 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004139 250.0
DYD3_k127_844225_12 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000001614 244.0
DYD3_k127_844225_13 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.00000000000000000000000000000000000000000000000000000000000001789 230.0
DYD3_k127_844225_14 haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000005085 214.0
DYD3_k127_844225_15 Protease prsW family - - - 0.000000000000000000000000000000000000000000000000000000001198 214.0
DYD3_k127_844225_16 Belongs to the Fur family K03711 - - 0.0000000000000000000000000000000000000000000000000003873 195.0
DYD3_k127_844225_17 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.000000000000000000000000000000000000000000004704 164.0
DYD3_k127_844225_18 penicillin-binding protein K05366 - 2.4.1.129,3.4.16.4 0.000000000000000000000000000000000000000008531 159.0
DYD3_k127_844225_2 acetylornithine aminotransferase K00821 - 2.6.1.11,2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000497 485.0
DYD3_k127_844225_20 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.000000000000000000000000000000000000002803 154.0
DYD3_k127_844225_22 META domain K03668 - - 0.00000000000000000000000000000000003245 145.0
DYD3_k127_844225_23 Belongs to the glycosyl hydrolase 43 family - - - 0.00000000000000000000000000000000003777 153.0
DYD3_k127_844225_24 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000005874 137.0
DYD3_k127_844225_25 TIGRFAM cysteine-rich repeat protein - - - 0.000000000000000000000000000000005915 143.0
DYD3_k127_844225_27 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.0000000000000000000000000000001964 133.0
DYD3_k127_844225_28 Belongs to the bacterial histone-like protein family - - - 0.0000000000000000000000000000002704 126.0
DYD3_k127_844225_29 Flagellar Motor Protein K02557 - - 0.0000000000000000000000000005086 124.0
DYD3_k127_844225_3 Peptidase dimerisation domain K12941 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006669 475.0
DYD3_k127_844225_30 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.000000000000000000000000001104 117.0
DYD3_k127_844225_32 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.0000000000000000000000000193 119.0
DYD3_k127_844225_33 - - - - 0.00000000000000000000000007782 121.0
DYD3_k127_844225_35 ChrR Cupin-like domain K07167 - - 0.00000000000001673 82.0
DYD3_k127_844225_36 Glycosyl hydrolase family 10 - - - 0.00000001926 67.0
DYD3_k127_844225_37 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000002249 59.0
DYD3_k127_844225_38 YceI-like domain - - - 0.000004765 56.0
DYD3_k127_844225_39 serine-type endopeptidase activity - - - 0.00002419 57.0
DYD3_k127_844225_4 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 445.0
DYD3_k127_844225_40 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.00004098 46.0
DYD3_k127_844225_5 Flagellar Motor Protein K11892 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006541 441.0
DYD3_k127_844225_6 Mannose-6-phosphate isomerase K00971 - 2.7.7.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000396 389.0
DYD3_k127_844225_7 Helix-hairpin-helix class 2 (Pol1 family) motifs - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003142 353.0
DYD3_k127_844225_8 Choline/ethanolamine kinase K07102 - 2.7.1.221 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001863 308.0
DYD3_k127_844225_9 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001065 289.0
DYD3_k127_865010_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1112.0
DYD3_k127_865010_1 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 4.273e-216 675.0
DYD3_k127_865010_2 ABC transporter K06147 - - 8.069e-211 668.0
DYD3_k127_865010_3 Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)-succinylornithine, ammonia and CO(2) K01484 - 3.5.3.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002105 497.0
DYD3_k127_865010_4 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003965 266.0
DYD3_k127_865010_5 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.00000000000000000000000000000000000000000000000000000000000000001057 231.0
DYD3_k127_95758_0 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH K00033 - 1.1.1.343,1.1.1.44 7.817e-216 679.0
DYD3_k127_95758_1 Catalytic LigB subunit of aromatic ring-opening dioxygenase K15777 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000025 347.0
DYD3_k127_95758_2 Family membership K08884 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000009611 220.0
DYD3_k127_95758_3 Serine/threonine phosphatases, family 2C, catalytic domain K01090,K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000004961 184.0
DYD3_k127_95758_4 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000002022 102.0
DYD3_k127_95758_5 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000001837 92.0
DYD3_k127_989536_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0 1536.0
DYD3_k127_989536_1 Histidine kinase - - - 2.55e-254 796.0
DYD3_k127_989536_10 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000000000000005441 167.0
DYD3_k127_989536_11 PFAM response regulator receiver - - - 0.0000000000000000002128 103.0
DYD3_k127_989536_12 Histidine kinase K00936 - 2.7.13.3 0.0000000000000000002229 96.0
DYD3_k127_989536_13 Tryptophan halogenase - - - 0.00000000000000006828 93.0
DYD3_k127_989536_14 cheY-homologous receiver domain - - - 0.00000000000000007083 87.0
DYD3_k127_989536_15 DNA-binding response regulator K07713 - - 0.000000000001619 75.0
DYD3_k127_989536_16 Domain of unknown function (DUF4328) - - - 0.000000000004334 75.0
DYD3_k127_989536_17 Aldose 1-epimerase K01785 GO:0003674,GO:0003824,GO:0004034,GO:0005975,GO:0005996,GO:0006006,GO:0006012,GO:0008150,GO:0008152,GO:0009056,GO:0016052,GO:0016853,GO:0016854,GO:0016857,GO:0019318,GO:0019320,GO:0019388,GO:0033499,GO:0044238,GO:0044281,GO:0044282,GO:0046365,GO:0071704,GO:1901575 5.1.3.3 0.00000001619 61.0
DYD3_k127_989536_18 protein with SCP PR1 domains - - - 0.00000002914 64.0
DYD3_k127_989536_2 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004029 461.0
DYD3_k127_989536_20 - - - - 0.00004737 53.0
DYD3_k127_989536_3 PAS fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003985 389.0
DYD3_k127_989536_4 depolymerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001338 376.0
DYD3_k127_989536_5 Histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002698 259.0
DYD3_k127_989536_6 Phosphoadenosine phosphosulfate reductase K00390 - 1.8.4.10,1.8.4.8 0.0000000000000000000000000000000000000000000000000000000000000005476 229.0
DYD3_k127_989536_7 iron ion homeostasis - - - 0.000000000000000000000000000000000000000000000000000000000000005062 239.0
DYD3_k127_989536_8 DSBA-like thioredoxin domain - - - 0.0000000000000000000000000000000000000000000000000000000000003237 219.0
DYD3_k127_989536_9 AAA ATPase domain - - - 0.000000000000000000000000000000000000000000000000000000001408 210.0