Overview

ID MAG00955
Name DYD3_bin.24
Sample SMP0027
Taxonomy
Kingdom Bacteria
Phylum Actinomycetota
Class AC-67
Order AC-67
Family AC-67
Genus DASWHR01
Species
Assembly information
Completeness (%) 93.24
Contamination (%) 2.57
GC content (%) 67.0
N50 (bp) 22,740
Genome size (bp) 3,131,648

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2617

Gene name Description KEGG GOs EC E-value Score Sequence
DYD3_k127_1008267_0 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 - 2.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004853 552.0
DYD3_k127_1008267_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 489.0
DYD3_k127_1008267_10 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000007735 140.0
DYD3_k127_1008267_11 methyltransferase activity K20444 - - 0.000000000000000000000003048 111.0
DYD3_k127_1008267_12 BNR repeat-like domain - - - 0.0000007013 62.0
DYD3_k127_1008267_2 PFAM bifunctional deaminase-reductase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003263 394.0
DYD3_k127_1008267_3 Activator of hsp90 atpase 1 family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007258 308.0
DYD3_k127_1008267_4 Polysaccharide biosynthesis protein K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000001544 275.0
DYD3_k127_1008267_5 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000003422 224.0
DYD3_k127_1008267_6 Sugar-specific transcriptional regulator TrmB - - - 0.000000000000000000000000000000000000000000000000000000000003656 223.0
DYD3_k127_1008267_7 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000000000000000000000000003129 195.0
DYD3_k127_1008267_8 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000007997 190.0
DYD3_k127_1008267_9 - - - - 0.00000000000000000000000000000000000000000001163 169.0
DYD3_k127_1029892_0 Glutamate synthase K00265 - 1.4.1.13,1.4.1.14 1.901e-278 865.0
DYD3_k127_1029892_1 TIGRFAM glutamate synthase, NADH NADPH, small subunit K00266 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 1.4.1.13,1.4.1.14 1.386e-211 667.0
DYD3_k127_1029892_2 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003991 580.0
DYD3_k127_1029892_3 Multicopper oxidase K06324 - 1.16.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002816 353.0
DYD3_k127_1029892_4 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004999 301.0
DYD3_k127_1029892_5 Subtilase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000238 290.0
DYD3_k127_1029892_6 Sigma factor PP2C-like phosphatases - - - 0.000000000000000000000000000000000000000000000000000000000674 231.0
DYD3_k127_1029892_7 sulfurtransferase - - - 0.000000000000000001331 93.0
DYD3_k127_1029892_8 Belongs to the binding-protein-dependent transport system permease family K01997 GO:0003333,GO:0003674,GO:0005215,GO:0005304,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006855,GO:0006865,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015173,GO:0015175,GO:0015179,GO:0015188,GO:0015190,GO:0015192,GO:0015238,GO:0015318,GO:0015658,GO:0015711,GO:0015801,GO:0015803,GO:0015804,GO:0015807,GO:0015818,GO:0015820,GO:0015823,GO:0015829,GO:0015849,GO:0015893,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0042221,GO:0042493,GO:0043090,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0089718,GO:0098655,GO:0098656,GO:0098657,GO:0098713,GO:0098739,GO:1902475,GO:1903714,GO:1903785,GO:1903825,GO:1905039 - 0.0000000000000001143 79.0
DYD3_k127_1029892_9 STAS domain K04749 - - 0.00008575 52.0
DYD3_k127_1035729_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 5.117e-293 942.0
DYD3_k127_1035729_1 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 4.357e-194 613.0
DYD3_k127_1035729_2 Folylpolyglutamate synthase K11754 GO:0003674,GO:0003824,GO:0004326,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006761,GO:0006807,GO:0008150,GO:0008152,GO:0008841,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046452,GO:0046483,GO:0046900,GO:0046901,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.12,6.3.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002242 329.0
DYD3_k127_1035729_3 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006950,GO:0007154,GO:0008150,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0016020,GO:0030312,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0042221,GO:0042594,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0050896,GO:0051716,GO:0071496,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001548 306.0
DYD3_k127_1035729_4 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003303 286.0
DYD3_k127_1035729_5 - - - - 0.00000000000000000000002127 117.0
DYD3_k127_1035729_6 Transposase - - - 0.00000000000000027 89.0
DYD3_k127_1035729_7 pathogenesis - - - 0.000000000007039 79.0
DYD3_k127_1035729_8 alginic acid biosynthetic process K20276 - - 0.000000003126 70.0
DYD3_k127_1035729_9 - - - - 0.0000001722 53.0
DYD3_k127_1041895_0 Intein splicing domain K02469 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0003916,GO:0003918,GO:0005488,GO:0005524,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006265,GO:0006725,GO:0006807,GO:0006996,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017076,GO:0017111,GO:0030312,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034335,GO:0034641,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0046872,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:0097367,GO:0140097,GO:1901265,GO:1901360,GO:1901363 5.99.1.3 6.065e-314 983.0
DYD3_k127_1041895_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0003916,GO:0003918,GO:0005488,GO:0005524,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006265,GO:0006725,GO:0006807,GO:0006996,GO:0007059,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017076,GO:0017111,GO:0030312,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034335,GO:0034641,GO:0035639,GO:0036094,GO:0040007,GO:0042623,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0046872,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:0097367,GO:0140097,GO:1901265,GO:1901360,GO:1901363 5.99.1.3 1.302e-232 738.0
DYD3_k127_1041895_10 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007088 286.0
DYD3_k127_1041895_11 Ami_3 K01448 GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009227 282.0
DYD3_k127_1041895_12 Belongs to the ParB family K03497 GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005694,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044464,GO:0060187,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001322 283.0
DYD3_k127_1041895_13 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002627 278.0
DYD3_k127_1041895_14 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0071944,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000009568 260.0
DYD3_k127_1041895_15 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0000000000000000000000000000000000000000000000000003163 198.0
DYD3_k127_1041895_16 -acetyltransferase - - - 0.000000000000000000000000000000000000000000000000004778 187.0
DYD3_k127_1041895_17 Sigma-70, region 4 K03088 GO:0001101,GO:0005575,GO:0005623,GO:0005886,GO:0006355,GO:0008150,GO:0009410,GO:0009415,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0010035,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0042221,GO:0044464,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:1901700,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000008989 160.0
DYD3_k127_1041895_18 belongs to the thioredoxin family K03671 GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006091,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009055,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0015037,GO:0015038,GO:0016020,GO:0016209,GO:0016491,GO:0016651,GO:0016657,GO:0016667,GO:0016668,GO:0016671,GO:0019725,GO:0022900,GO:0030312,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0071944,GO:0080007,GO:0097237,GO:0098754,GO:0098869,GO:1990748 - 0.0000000000000000000000000000000000005386 145.0
DYD3_k127_1041895_19 SNARE associated Golgi protein - - - 0.00000000000000000000000000001864 127.0
DYD3_k127_1041895_2 PFAM Aminotransferase class I and II K10206,K14261 - 2.6.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001829 552.0
DYD3_k127_1041895_20 Belongs to the Nudix hydrolase family - - - 0.0000000000000000000000000002045 119.0
DYD3_k127_1041895_21 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.000000000000000000000000001619 126.0
DYD3_k127_1041895_22 Putative single-stranded nucleic acids-binding domain K06346 - - 0.000000000000000000000002521 117.0
DYD3_k127_1041895_23 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000002218 85.0
DYD3_k127_1041895_24 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.00000000000000006337 90.0
DYD3_k127_1041895_25 Belongs to the UPF0232 family - - - 0.00000000000001467 84.0
DYD3_k127_1041895_26 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.0000000000003019 70.0
DYD3_k127_1041895_27 general stress protein B in uncultured methanogenic archaeon (Q0W564) - - - 0.00000000001227 70.0
DYD3_k127_1041895_28 Tfp pilus assembly protein FimV - - - 0.000000001943 71.0
DYD3_k127_1041895_3 tRNA nucleotidyltransferase poly(A) polymerase K00970,K00974 - 2.7.7.19,2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 501.0
DYD3_k127_1041895_4 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006172,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009133,GO:0009135,GO:0009136,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009179,GO:0009180,GO:0009185,GO:0009188,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016311,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030312,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046031,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090304,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990837 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001342 491.0
DYD3_k127_1041895_5 Type II/IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007893 409.0
DYD3_k127_1041895_6 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384,K03671 GO:0000166,GO:0001666,GO:0003674,GO:0003824,GO:0004791,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0008150,GO:0008152,GO:0009628,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0019725,GO:0036094,GO:0036293,GO:0040007,GO:0042221,GO:0042592,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0048037,GO:0050660,GO:0050661,GO:0050662,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070402,GO:0070482,GO:0070887,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901265,GO:1901363,GO:1990748 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002587 389.0
DYD3_k127_1041895_7 PFAM Cobyrinic acid a,c-diamide synthase K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 308.0
DYD3_k127_1041895_8 Methicillin resistance protein K05363,K11693 - 2.3.2.10,2.3.2.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004157 289.0
DYD3_k127_1041895_9 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003903 308.0
DYD3_k127_1080977_0 Fe-S oxidoreductase - - - 2.942e-262 826.0
DYD3_k127_1080977_1 Heterodisulfide reductase, subunit B K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 3.492e-203 638.0
DYD3_k127_1080977_10 FAD dependent oxidoreductase K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002518 462.0
DYD3_k127_1080977_11 geranylgeranyl reductase K21401 - 1.3.99.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003747 452.0
DYD3_k127_1080977_12 Histone deacetylase domain K04768 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006159 426.0
DYD3_k127_1080977_13 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003416 406.0
DYD3_k127_1080977_14 Elongator protein 3, MiaB family, Radical SAM K09711 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 406.0
DYD3_k127_1080977_15 Cytochrome b K03887 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001944 385.0
DYD3_k127_1080977_16 PFAM NAD-dependent epimerase dehydratase K01784 GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0044424,GO:0044444,GO:0044464,GO:0071944 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001989 390.0
DYD3_k127_1080977_17 4Fe-4S dicluster domain K03390 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006526 383.0
DYD3_k127_1080977_18 Acyltransferase - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004844 388.0
DYD3_k127_1080977_19 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001983 393.0
DYD3_k127_1080977_2 TIGRFAM NADH-quinone oxidoreductase, chain G K00336 GO:0003674,GO:0003824,GO:0003954,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0009405,GO:0010941,GO:0016020,GO:0016491,GO:0016651,GO:0030312,GO:0033668,GO:0035821,GO:0042981,GO:0043067,GO:0043069,GO:0044003,GO:0044068,GO:0044403,GO:0044419,GO:0044464,GO:0044531,GO:0044532,GO:0048037,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051536,GO:0051540,GO:0051701,GO:0051704,GO:0051817,GO:0052040,GO:0052041,GO:0052150,GO:0052248,GO:0052433,GO:0052490,GO:0055114,GO:0060548,GO:0065007,GO:0071944 1.6.5.3 3.79e-199 646.0
DYD3_k127_1080977_20 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000658 376.0
DYD3_k127_1080977_21 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002826 355.0
DYD3_k127_1080977_22 penicillin-binding protein, 1A family K05366 - 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008441 363.0
DYD3_k127_1080977_23 Electron transfer flavoprotein alpha subunit K03522 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004728 316.0
DYD3_k127_1080977_24 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003466 293.0
DYD3_k127_1080977_25 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 GO:0000287,GO:0003674,GO:0003824,GO:0004735,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016020,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0018130,GO:0019752,GO:0030145,GO:0040007,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0046914,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005974 290.0
DYD3_k127_1080977_26 Belongs to the binding-protein-dependent transport system permease family K01995,K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003224 300.0
DYD3_k127_1080977_27 ResB-like family K07399 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007604 289.0
DYD3_k127_1080977_28 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005124 275.0
DYD3_k127_1080977_29 HI0933-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002746 282.0
DYD3_k127_1080977_3 Fe-S oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001686 609.0
DYD3_k127_1080977_30 transferase activity, transferring alkyl or aryl (other than methyl) groups K22205 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001344 267.0
DYD3_k127_1080977_31 Lipoate-protein ligase K03800 - 6.3.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000004157 273.0
DYD3_k127_1080977_32 Cytochrome c-type biogenesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001485 258.0
DYD3_k127_1080977_33 Proline dehydrogenase K00318 - - 0.0000000000000000000000000000000000000000000000000000000000000000000008939 246.0
DYD3_k127_1080977_34 ABC transporter, ATP-binding protein K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000002316 242.0
DYD3_k127_1080977_35 Electron transfer flavoprotein domain K03521 - - 0.00000000000000000000000000000000000000000000000000000000000000000002724 240.0
DYD3_k127_1080977_36 Belongs to the FPP GGPP synthase family K00805 - 2.5.1.30 0.0000000000000000000000000000000000000000000000000000000000000000008142 253.0
DYD3_k127_1080977_37 - - - - 0.000000000000000000000000000000000000000000000000000000000000002286 225.0
DYD3_k127_1080977_38 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338,K12143 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000001783 220.0
DYD3_k127_1080977_39 response regulator, receiver - - - 0.00000000000000000000000000000000000000000000000000000000007457 211.0
DYD3_k127_1080977_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 577.0
DYD3_k127_1080977_40 Cytochrome b(C-terminal)/b6/petD - - - 0.000000000000000000000000000000000000000000000000000000004742 209.0
DYD3_k127_1080977_41 DsrE/DsrF/DrsH-like family - - - 0.0000000000000000000000000000000000000000000000000000000093 205.0
DYD3_k127_1080977_42 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000000000000000000003037 201.0
DYD3_k127_1080977_43 Cytochrome c biogenesis protein K06196 - - 0.0000000000000000000000000000000000000000000000000000005288 205.0
DYD3_k127_1080977_44 COG0411 ABC-type branched-chain amino acid transport systems, ATPase component K01995 GO:0000166,GO:0003333,GO:0003674,GO:0005215,GO:0005304,GO:0005342,GO:0005488,GO:0005524,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006855,GO:0006865,GO:0008144,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015173,GO:0015175,GO:0015179,GO:0015188,GO:0015192,GO:0015238,GO:0015318,GO:0015658,GO:0015711,GO:0015801,GO:0015803,GO:0015804,GO:0015807,GO:0015818,GO:0015823,GO:0015829,GO:0015849,GO:0015893,GO:0016020,GO:0017076,GO:0022857,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034220,GO:0035639,GO:0036094,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0097159,GO:0097367,GO:0098655,GO:0098656,GO:1901265,GO:1901363,GO:1902475,GO:1903714,GO:1903785,GO:1903825,GO:1905039 - 0.000000000000000000000000000000000000000000000000000001072 220.0
DYD3_k127_1080977_45 glycine decarboxylation via glycine cleavage system K02437 - - 0.000000000000000000000000000000000000000000000000000005082 193.0
DYD3_k127_1080977_46 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein - - - 0.00000000000000000000000000000000000000000000000000001089 194.0
DYD3_k127_1080977_47 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.0000000000000000000000000000000000000000000000000007858 196.0
DYD3_k127_1080977_48 DsrE/DsrF-like family K07092 - - 0.000000000000000000000000000000000000000000000000002624 184.0
DYD3_k127_1080977_49 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000003686 193.0
DYD3_k127_1080977_5 Aldehyde dehydrogenase family K00141,K22187 - 1.2.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002543 574.0
DYD3_k127_1080977_50 Cytochrome C and Quinol oxidase polypeptide I K00404 - 1.9.3.1 0.00000000000000000000000000000000000000000000001344 196.0
DYD3_k127_1080977_51 PFAM Xylose isomerase - - - 0.000000000000000000000000000000000000000000001134 179.0
DYD3_k127_1080977_52 PFAM Biotin lipoate A B protein ligase - - - 0.000000000000000000000000000000000000000000007903 183.0
DYD3_k127_1080977_53 Phosphatase - GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0042578,GO:0044237 - 0.00000000000000000000000000000000000000000001196 183.0
DYD3_k127_1080977_54 PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0008137,GO:0008150,GO:0008152,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0022900,GO:0022904,GO:0030964,GO:0032991,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.00000000000000000000000000000000000000000005886 176.0
DYD3_k127_1080977_55 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.0000000000000000000000000000000000000004806 163.0
DYD3_k127_1080977_56 Rieske 2Fe-2S - - - 0.0000000000000000000000000000000000000007757 164.0
DYD3_k127_1080977_57 Rieske [2Fe-2S] domain - - - 0.00000000000000000000000000000000000000154 158.0
DYD3_k127_1080977_58 Psort location CytoplasmicMembrane, score K07777 - 2.7.13.3 0.00000000000000000000000000000000000000836 163.0
DYD3_k127_1080977_59 Glycine cleavage H-protein - - - 0.0000000000000000000000000000000000006837 143.0
DYD3_k127_1080977_6 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 526.0
DYD3_k127_1080977_60 Thioredoxin-like - - - 0.0000000000000000000000000000000002217 139.0
DYD3_k127_1080977_61 polynucleotide 5'-hydroxyl-kinase activity K06947 - - 0.000000000000000000000000000000001601 141.0
DYD3_k127_1080977_62 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000000000003996 132.0
DYD3_k127_1080977_63 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0030964,GO:0032991,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0098796,GO:1901135,GO:1901360,GO:1901564,GO:1902494 1.6.5.3 0.00000000000000000000000000000000994 133.0
DYD3_k127_1080977_64 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340,K05576 - 1.6.5.3 0.00000000000000000000000000005475 128.0
DYD3_k127_1080977_65 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000006773 123.0
DYD3_k127_1080977_66 4Fe-4S dicluster domain - - - 0.0000000000000000000000002594 108.0
DYD3_k127_1080977_67 cell redox homeostasis K02199 - - 0.0000000000000000000000006005 111.0
DYD3_k127_1080977_68 Belongs to the sulfur carrier protein TusA family - GO:0008150,GO:0009987,GO:0019725,GO:0042592,GO:0048878,GO:0055082,GO:0065007,GO:0065008 - 0.000000000000000000000001059 106.0
DYD3_k127_1080977_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000244 512.0
DYD3_k127_1080977_70 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.00000000000000000000001218 116.0
DYD3_k127_1080977_71 membrane transporter protein K07090 - - 0.00000000000000000000003096 109.0
DYD3_k127_1080977_72 - - - - 0.0000000000000000000002557 102.0
DYD3_k127_1080977_73 Cytochrome C oxidase, mono-heme subunit/FixO - - - 0.00000000000000000001196 98.0
DYD3_k127_1080977_74 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000003989 99.0
DYD3_k127_1080977_75 helix_turn_helix, Lux Regulon - - - 0.000000000000000008119 89.0
DYD3_k127_1080977_76 Helix-turn-helix domain - - - 0.0000000000000004003 79.0
DYD3_k127_1080977_77 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.000000000000001386 84.0
DYD3_k127_1080977_78 peptidase inhibitor activity K21449 - - 0.00000000000001116 83.0
DYD3_k127_1080977_79 Receptor family ligand binding region - - - 0.00000000000003673 87.0
DYD3_k127_1080977_8 NADH-quinone oxidoreductase chain L K00341 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002179 518.0
DYD3_k127_1080977_80 Domain of unknown function (DUF4352) - - - 0.0000000000806 70.0
DYD3_k127_1080977_81 EamA-like transporter family - - - 0.000000001097 70.0
DYD3_k127_1080977_83 - - - - 0.00000003009 63.0
DYD3_k127_1080977_85 Heavy metal translocating P-type atpase - - - 0.0000003453 60.0
DYD3_k127_1080977_86 Tfp pilus assembly protein FimV - - - 0.0002586 53.0
DYD3_k127_1080977_9 Elongator protein 3, MiaB family, Radical SAM K01012 - 2.8.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005855 499.0
DYD3_k127_1084173_0 Histidine kinase K13924 - 2.1.1.80,3.1.1.61 0.00000000000000000000000000000000000000000000000000002202 211.0
DYD3_k127_1084173_1 PFAM SMP-30 Gluconolaconase - - - 0.0000000000000000000007365 112.0
DYD3_k127_1084173_2 TIGRFAM 40-residue YVTN family beta-propeller repeat protein - - - 0.0000000000000002462 94.0
DYD3_k127_1195499_0 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005546 498.0
DYD3_k127_1195499_1 Acyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005411 317.0
DYD3_k127_1195499_2 protein homotetramerization - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001405 256.0
DYD3_k127_1195499_3 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000003593 172.0
DYD3_k127_1195499_4 Domain of unknown function (DUF202) K00389 - - 0.000000000000000000000000002261 117.0
DYD3_k127_1195499_5 TIGRFAM 40-residue YVTN family beta-propeller repeat - - - 0.0006113 52.0
DYD3_k127_1311912_0 PFAM glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000001138 184.0
DYD3_k127_1311912_1 Glycosyl transferases group 1 K21001 - - 0.000000000000000000000000000000000000000000005649 179.0
DYD3_k127_1338606_0 DNA translocase ftsK K03466 GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0030312,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 1.034e-198 657.0
DYD3_k127_1338606_1 Endoribonuclease that initiates mRNA decay K18682 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004835 546.0
DYD3_k127_1338606_10 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.00000000000000000000002977 107.0
DYD3_k127_1338606_11 chitinase K01183 - 3.2.1.14 0.00000000000000001584 98.0
DYD3_k127_1338606_12 Domain of unknown function (DUF4115) - - - 0.00000000000003306 83.0
DYD3_k127_1338606_13 regulation of DNA repair K03565 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000003538 68.0
DYD3_k127_1338606_14 PKD domain - - - 0.0001322 56.0
DYD3_k127_1338606_2 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0000150,GO:0000166,GO:0000287,GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0009314,GO:0009411,GO:0009416,GO:0009432,GO:0009605,GO:0009628,GO:0009650,GO:0009987,GO:0009991,GO:0016462,GO:0016787,GO:0016788,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0030145,GO:0030554,GO:0031668,GO:0032553,GO:0032555,GO:0032559,GO:0033554,GO:0034641,GO:0035639,GO:0036094,GO:0042148,GO:0042221,GO:0042623,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046677,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0090304,GO:0090305,GO:0097159,GO:0097367,GO:0140097,GO:1901265,GO:1901360,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002518 508.0
DYD3_k127_1338606_3 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal K00457 - 1.13.11.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001539 479.0
DYD3_k127_1338606_4 Belongs to the CinA family K03742,K03743 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 3.5.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006378 360.0
DYD3_k127_1338606_5 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004363 309.0
DYD3_k127_1338606_6 Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate K00451 - 1.13.11.5 0.000000000000000000000000000000000000000000000000768 180.0
DYD3_k127_1338606_7 Serine protease with a broad substrate specificity K17734 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005488,GO:0005509,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0046872,GO:0070011,GO:0071704,GO:0140096,GO:1901564 - 0.000000000000000000000000000000004118 150.0
DYD3_k127_1338606_8 Stage V sporulation protein S (SpoVS) K06416 - - 0.000000000000000000000000000004016 123.0
DYD3_k127_1338606_9 CDP-alcohol phosphatidyltransferase K00995 GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0090407,GO:1901576 2.7.8.5 0.00000000000000000000000001681 115.0
DYD3_k127_1380950_0 PFAM regulatory protein LuxR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 392.0
DYD3_k127_1380950_1 Thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000000004084 101.0
DYD3_k127_138951_0 Belongs to the thiolase family K00626,K00632 - 2.3.1.16,2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 471.0
DYD3_k127_138951_1 Putative cyclase K07130 - 3.5.1.9 0.00000000000000000000000000000000000000000000000000002675 195.0
DYD3_k127_138951_2 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000002282 150.0
DYD3_k127_138951_3 Metal-sensitive transcriptional repressor K21600 - - 0.00000000000000000000004305 101.0
DYD3_k127_138951_4 Putative peptidoglycan binding domain - - - 0.0000000000000000001952 100.0
DYD3_k127_138951_5 CsbD-like - - - 0.0000000002237 65.0
DYD3_k127_138951_6 involved in cell division - - - 0.00000003136 59.0
DYD3_k127_138951_7 Regulatory protein, FmdB family - - - 0.0000006023 54.0
DYD3_k127_1465733_0 amino acid - - - 1.323e-253 788.0
DYD3_k127_1465733_1 Domains in Na-Ca exchangers and integrin-beta4 K01406 - 3.4.24.40 0.0000000000000000000000000000000000000000006827 183.0
DYD3_k127_1465733_2 Toxic component of a toxin-antitoxin (TA) module K07171 - - 0.000000000000000000000000007197 113.0
DYD3_k127_1465733_3 response to nickel cation - GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0008150,GO:0040008,GO:0045926,GO:0045927,GO:0048518,GO:0048519,GO:0050789,GO:0065007,GO:0097159,GO:1901363 - 0.000000000000000003202 86.0
DYD3_k127_1465733_4 Sodium alanine symporter K03310 - - 0.0000000000023 71.0
DYD3_k127_1465733_5 domain, Protein - - - 0.0008701 53.0
DYD3_k127_1482059_0 Thioesterase superfamily - - - 0.00000000000000000000000000000000000000004168 169.0
DYD3_k127_1482059_1 Glycosyltransferase family 87 - - - 0.00000000000000000000000005148 124.0
DYD3_k127_1482059_3 lyase activity K01387,K03301 - 3.4.24.3 0.00000001088 68.0
DYD3_k127_151500_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 1.403e-258 807.0
DYD3_k127_151500_1 AAA domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006916 570.0
DYD3_k127_151500_10 TIGRFAM transcriptional regulator, Rrf2 family - - - 0.0000000000000000000000000002261 125.0
DYD3_k127_151500_11 Protein of unknown function (DUF3263) - - - 0.000000000000000000000000008052 116.0
DYD3_k127_151500_12 PemK-like, MazF-like toxin of type II toxin-antitoxin system K07171 GO:0008150,GO:0040008,GO:0045926,GO:0048519,GO:0050789,GO:0065007 - 0.00000000000000000002686 94.0
DYD3_k127_151500_13 LytR cell envelope-related transcriptional attenuator - - - 0.00004097 53.0
DYD3_k127_151500_2 Threonine synthase K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008557 521.0
DYD3_k127_151500_3 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 511.0
DYD3_k127_151500_4 Glycosyl transferases group 1 K13057 - 2.4.1.245 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003783 401.0
DYD3_k127_151500_5 Glycosyltransferase family 20 K00697 - 2.4.1.15,2.4.1.347 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001768 392.0
DYD3_k127_151500_6 Haloacid dehalogenase domain protein hydrolase, type 3 - - - 0.00000000000000000000000000000000000000001412 164.0
DYD3_k127_151500_7 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000002333 172.0
DYD3_k127_151500_8 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.0000000000000000000000000000000001074 143.0
DYD3_k127_151500_9 ThiS family K03636 - - 0.000000000000000000000000000001434 123.0
DYD3_k127_1540468_0 Carboxyl transferase domain - - - 1.207e-226 713.0
DYD3_k127_1540468_1 Glycosyl hydrolases family 15 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002792 530.0
DYD3_k127_1540468_10 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000004192 177.0
DYD3_k127_1540468_11 Alpha/beta hydrolase family K06889,K07397 - - 0.00000000000000000000000000000000000000003696 169.0
DYD3_k127_1540468_12 D-Ala-D-Ala carboxypeptidase 3 (S13) family K07259 - 3.4.16.4 0.000000000000000000000000000000000000003489 163.0
DYD3_k127_1540468_13 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor region - - - 0.0000000000000000000000000000000000002607 160.0
DYD3_k127_1540468_14 NUDIX domain - - - 0.000000000000000000000000000005115 123.0
DYD3_k127_1540468_15 PFAM Cyclic nucleotide-binding - - - 0.00000000000000000000000000009708 123.0
DYD3_k127_1540468_16 protein, possibly involved in aromatic compounds catabolism - - - 0.00000000000000004189 87.0
DYD3_k127_1540468_17 - - - - 0.000000003393 69.0
DYD3_k127_1540468_2 Putative modulator of DNA gyrase K03568 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006393 471.0
DYD3_k127_1540468_3 acyl-CoA dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008927 454.0
DYD3_k127_1540468_4 Putative modulator of DNA gyrase K03592 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003844 294.0
DYD3_k127_1540468_5 Luciferase-like monooxygenase K14728 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000373 284.0
DYD3_k127_1540468_6 DNA polymerase alpha chain like domain K07053,K20859 - 3.1.3.97,3.1.4.57 0.00000000000000000000000000000000000000000000000000000000000000000000000000001163 280.0
DYD3_k127_1540468_7 O-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000006609 243.0
DYD3_k127_1540468_8 helix_turn_helix, cAMP Regulatory protein - - - 0.000000000000000000000000000000000000000000000000000001342 201.0
DYD3_k127_1540468_9 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000002802 183.0
DYD3_k127_1584509_0 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000004193 246.0
DYD3_k127_1584509_1 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.00000000006106 71.0
DYD3_k127_166284_0 -acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001638 265.0
DYD3_k127_166284_1 pectinesterase activity - - - 0.000000000000000000000000001724 129.0
DYD3_k127_166284_2 Phosphodiester glycosidase - - - 0.000000000000000006815 97.0
DYD3_k127_166284_3 PKD domain - - - 0.00000000000000004053 96.0
DYD3_k127_166284_4 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.0000000000009776 70.0
DYD3_k127_166284_5 Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA K18955 - - 0.000000002931 63.0
DYD3_k127_166284_6 FHA domain containing protein - - - 0.0000001453 59.0
DYD3_k127_166284_7 amine dehydrogenase activity - - - 0.0000003601 61.0
DYD3_k127_166284_8 cellulose binding K13735,K20276 - - 0.000005833 55.0
DYD3_k127_166284_9 Belongs to the anti-sigma-factor antagonist family K06378 - - 0.0001904 52.0
DYD3_k127_1681652_0 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 - 1.11.1.21 0.0 1200.0
DYD3_k127_1681652_1 E1-E2 ATPase K01533,K12954,K17686,K21887 - 3.6.3.4,3.6.3.54 0.0 1133.0
DYD3_k127_1681652_10 AAA ATPase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008763 431.0
DYD3_k127_1681652_11 Protein of unknown function (DUF3494) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005428 259.0
DYD3_k127_1681652_12 PFAM Adenylate and Guanylate cyclase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000001126 252.0
DYD3_k127_1681652_13 Peptidase M50 K16922 - - 0.0000000000000000000000000000000000000000000000000000000000000000006387 255.0
DYD3_k127_1681652_14 Enoyl-CoA hydratase K01692 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000001118 236.0
DYD3_k127_1681652_15 Pfam SNARE associated Golgi protein K03975 - - 0.00000000000000000000000000000000000000000000000000000000000000231 224.0
DYD3_k127_1681652_16 X-Pro dipeptidyl-peptidase (S15 family) K01990 - - 0.000000000000000000000000000000000000000000000000000000000001223 232.0
DYD3_k127_1681652_17 PFAM Translin K07477 - - 0.000000000000000000000000000000000000000000000000000000000001898 215.0
DYD3_k127_1681652_18 3-demethylubiquinone-9 3-methyltransferase K04750 - - 0.0000000000000000000000000000000000000000000000000000000002707 205.0
DYD3_k127_1681652_19 methyltransferase - - - 0.0000000000000000000000000000000000000000002787 170.0
DYD3_k127_1681652_2 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 2.583e-292 940.0
DYD3_k127_1681652_20 OsmC-like protein - - - 0.0000000000000000000000000000000008406 141.0
DYD3_k127_1681652_21 Sortilin, neurotensin receptor 3, - - - 0.0000000000000000000000000000000327 137.0
DYD3_k127_1681652_22 - - - - 0.00000000000000000000000000000008238 128.0
DYD3_k127_1681652_23 Cupin 2, conserved barrel domain protein K00452 GO:0000334,GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0044237,GO:0044248,GO:0051213,GO:0055114 1.13.11.6 0.000000000000000000000000000001512 132.0
DYD3_k127_1681652_24 - - - - 0.000000000000000000000000000009084 122.0
DYD3_k127_1681652_25 PHP domain protein - - - 0.00000000000000000000000001018 124.0
DYD3_k127_1681652_26 transcriptional regulator - - - 0.0000000000000000000000002709 113.0
DYD3_k127_1681652_27 helix_turn_helix, cAMP Regulatory protein K10914 GO:0000166,GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006109,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010565,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010675,GO:0016020,GO:0017076,GO:0019219,GO:0019222,GO:0030312,GO:0030551,GO:0030552,GO:0030554,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0032993,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043565,GO:0044212,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0062012,GO:0065007,GO:0071944,GO:0080090,GO:0097159,GO:0097367,GO:0140110,GO:1901265,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2000874,GO:2001141 - 0.000000000000000000000009213 109.0
DYD3_k127_1681652_28 - - - - 0.00000000000000000000001509 105.0
DYD3_k127_1681652_29 Protein of unknown function (DUF433) - - - 0.0000000000000000000006346 107.0
DYD3_k127_1681652_3 Glycosyl Transferase - - - 1.062e-280 879.0
DYD3_k127_1681652_30 - - - - 0.00000000000000000004766 93.0
DYD3_k127_1681652_31 PFAM Uncharacterised protein family UPF0150 - - - 0.000000000000000102 81.0
DYD3_k127_1681652_32 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000006883 76.0
DYD3_k127_1681652_33 transcriptional regulator - - - 0.00000000001226 77.0
DYD3_k127_1681652_34 Lipase (class 3) - - - 0.00000000002487 78.0
DYD3_k127_1681652_36 HicA toxin of bacterial toxin-antitoxin, - - - 0.00000008543 63.0
DYD3_k127_1681652_37 PFAM Polyketide cyclase dehydrase - - - 0.00003229 52.0
DYD3_k127_1681652_38 AntiSigma factor - - - 0.0004264 51.0
DYD3_k127_1681652_39 Protein of unknown function (DUF4242) - - - 0.0007322 46.0
DYD3_k127_1681652_4 FAD binding domain - - - 7.886e-211 679.0
DYD3_k127_1681652_5 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000138 508.0
DYD3_k127_1681652_6 peptidase M36 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 534.0
DYD3_k127_1681652_7 DNA helicase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007146 471.0
DYD3_k127_1681652_8 BNR repeat-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003228 437.0
DYD3_k127_1681652_9 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007207 437.0
DYD3_k127_1698298_0 DNA polymerase X family K02347 - - 1.132e-205 654.0
DYD3_k127_1698298_1 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.20 2.277e-194 636.0
DYD3_k127_1698298_10 ATP phosphoribosyltransferase K00765 - 2.4.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 344.0
DYD3_k127_1698298_11 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002025 338.0
DYD3_k127_1698298_12 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003114 329.0
DYD3_k127_1698298_13 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008123 322.0
DYD3_k127_1698298_14 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009927 322.0
DYD3_k127_1698298_15 Belongs to the binding-protein-dependent transport system permease family K01995,K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 329.0
DYD3_k127_1698298_16 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 316.0
DYD3_k127_1698298_17 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005881 290.0
DYD3_k127_1698298_18 PAS domain K18350 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000003507 282.0
DYD3_k127_1698298_19 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005098 270.0
DYD3_k127_1698298_2 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008767 532.0
DYD3_k127_1698298_20 Branched-chain amino acid ATP-binding cassette transporter K01995,K01998 GO:0003333,GO:0003674,GO:0005215,GO:0005304,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006855,GO:0006865,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015173,GO:0015175,GO:0015179,GO:0015188,GO:0015192,GO:0015238,GO:0015318,GO:0015658,GO:0015711,GO:0015801,GO:0015803,GO:0015804,GO:0015807,GO:0015818,GO:0015823,GO:0015829,GO:0015849,GO:0015893,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0042221,GO:0042493,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098655,GO:0098656,GO:1902475,GO:1903714,GO:1903785,GO:1903825,GO:1905039 - 0.000000000000000000000000000000000000000000000000000000000000000000000002286 275.0
DYD3_k127_1698298_21 ABC transporter, ATP-binding protein K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000012 255.0
DYD3_k127_1698298_22 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0040007,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008 - 0.00000000000000000000000000000000000000000000000000000000000000000009087 239.0
DYD3_k127_1698298_23 PFAM ABC transporter related K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000597 247.0
DYD3_k127_1698298_24 Protein of unknown function (DUF1015) - - - 0.000000000000000000000000000000000000000000000000000000000000000006197 247.0
DYD3_k127_1698298_25 Ribosomal RNA methyltransferase RrmJ FtsJ K06442 GO:0000154,GO:0001510,GO:0001897,GO:0001906,GO:0001907,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0019835,GO:0019836,GO:0022613,GO:0031167,GO:0031640,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0035821,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044003,GO:0044004,GO:0044085,GO:0044179,GO:0044237,GO:0044238,GO:0044260,GO:0044364,GO:0044403,GO:0044419,GO:0044764,GO:0046483,GO:0051701,GO:0051704,GO:0051715,GO:0051801,GO:0051817,GO:0051818,GO:0051883,GO:0052331,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.226,2.1.1.227 0.00000000000000000000000000000000000000000000000000000001137 205.0
DYD3_k127_1698298_26 PFAM Rhomboid family - - - 0.000000000000000000000000000000000000000000000000000000234 202.0
DYD3_k127_1698298_27 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 GO:0000166,GO:0003674,GO:0003824,GO:0003951,GO:0005488,GO:0005524,GO:0006082,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006741,GO:0006753,GO:0006793,GO:0006796,GO:0006797,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.23 0.0000000000000000000000000000000000000000000000000000002823 206.0
DYD3_k127_1698298_28 riboflavin synthase, alpha K00793 GO:0003674,GO:0003824,GO:0004746,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.9 0.0000000000000000000000000000000000000000000000000007016 198.0
DYD3_k127_1698298_29 Belongs to the ribulose-phosphate 3-epimerase family K01783 GO:0003674,GO:0003824,GO:0004750,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009052,GO:0009056,GO:0009117,GO:0009987,GO:0016052,GO:0016853,GO:0016854,GO:0016857,GO:0019321,GO:0019323,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046483,GO:0046496,GO:0046872,GO:0051156,GO:0051186,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564,GO:1901575 5.1.3.1 0.0000000000000000000000000000000000000000000000001095 185.0
DYD3_k127_1698298_3 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007053 505.0
DYD3_k127_1698298_30 Haloacid dehalogenase-like hydrolase K01101 - 3.1.3.41 0.0000000000000000000000000000000000000000001086 176.0
DYD3_k127_1698298_31 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.0000000000000000000000000000000000000000003674 173.0
DYD3_k127_1698298_32 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000233 165.0
DYD3_k127_1698298_33 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016020,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:0071944,GO:1990904 - 0.0000000000000000000000000000000000000000347 158.0
DYD3_k127_1698298_34 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.000000000000000000000000000000000002224 145.0
DYD3_k127_1698298_35 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000001258 145.0
DYD3_k127_1698298_36 COG NOG14600 non supervised orthologous group - - - 0.00000000000000000000000000000008766 124.0
DYD3_k127_1698298_37 Regulates arginine biosynthesis genes K03402 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 - 0.0000000000000000000000000000003193 135.0
DYD3_k127_1698298_38 Unextendable partial coding region - - - 0.000000000000000000000000000000387 123.0
DYD3_k127_1698298_39 Belongs to the binding-protein-dependent transport system permease family K06020 - 3.6.3.25 0.000000000000000000000000000001049 132.0
DYD3_k127_1698298_4 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006385 470.0
DYD3_k127_1698298_40 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.00000000000000000000000001314 126.0
DYD3_k127_1698298_41 'Cold-shock' DNA-binding domain K03704 - - 0.00000000000000000000008514 103.0
DYD3_k127_1698298_42 copper ion homeostasis - GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0006810,GO:0006811,GO:0008150,GO:0009279,GO:0015267,GO:0015288,GO:0016020,GO:0016021,GO:0019867,GO:0022803,GO:0022829,GO:0022857,GO:0030312,GO:0030313,GO:0031224,GO:0031975,GO:0032991,GO:0044425,GO:0044462,GO:0044464,GO:0046930,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098796 - 0.0000000000000000000003171 109.0
DYD3_k127_1698298_43 LAGLIDADG endonuclease - - - 0.000000000000000000002371 99.0
DYD3_k127_1698298_44 - - - - 0.000000000000000000007046 94.0
DYD3_k127_1698298_45 Kelch - GO:0000003,GO:0000133,GO:0000278,GO:0000281,GO:0000746,GO:0000747,GO:0000755,GO:0000910,GO:0000935,GO:0001100,GO:0005575,GO:0005622,GO:0005623,GO:0005628,GO:0005737,GO:0005856,GO:0005874,GO:0005875,GO:0005881,GO:0005933,GO:0005934,GO:0005935,GO:0005937,GO:0005938,GO:0007049,GO:0007088,GO:0007096,GO:0007163,GO:0007346,GO:0008104,GO:0008150,GO:0008360,GO:0009987,GO:0010564,GO:0010639,GO:0010948,GO:0015630,GO:0016020,GO:0019953,GO:0022402,GO:0022413,GO:0022414,GO:0022603,GO:0022604,GO:0030427,GO:0030428,GO:0031110,GO:0031111,GO:0031113,GO:0031115,GO:0031333,GO:0031500,GO:0032153,GO:0032155,GO:0032187,GO:0032231,GO:0032271,GO:0032272,GO:0032465,GO:0032505,GO:0032506,GO:0032878,GO:0032879,GO:0032886,GO:0032956,GO:0032970,GO:0032991,GO:0033036,GO:0033043,GO:0034613,GO:0035371,GO:0035838,GO:0035839,GO:0035840,GO:0036214,GO:0042763,GO:0042764,GO:0042995,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043254,GO:0043332,GO:0044087,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044448,GO:0044463,GO:0044464,GO:0044703,GO:0044764,GO:0045786,GO:0045839,GO:0045930,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050793,GO:0050794,GO:0051049,GO:0051128,GO:0051129,GO:0051179,GO:0051285,GO:0051286,GO:0051301,GO:0051302,GO:0051493,GO:0051494,GO:0051641,GO:0051704,GO:0051726,GO:0051783,GO:0051784,GO:0060627,GO:0061160,GO:0061172,GO:0061245,GO:0061246,GO:0061640,GO:0065007,GO:0065008,GO:0070507,GO:0070727,GO:0071944,GO:0071963,GO:0072697,GO:0090337,GO:0097427,GO:0099070,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0099568,GO:0099738,GO:0110053,GO:0120025,GO:0120038,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902405,GO:1902410,GO:1902486,GO:1902903,GO:1902904,GO:1903047,GO:1904511,GO:1904758,GO:1990151,GO:1990615,GO:1990752,GO:1990778,GO:1990896,GO:2000099,GO:2000100,GO:2000114,GO:2000769,GO:2000771 - 0.000000000000000000007604 106.0
DYD3_k127_1698298_46 - - - - 0.00000000000000000003934 94.0
DYD3_k127_1698298_47 - - - - 0.0000000000000000003432 89.0
DYD3_k127_1698298_48 LAGLIDADG endonuclease - - - 0.0000000000000000009024 91.0
DYD3_k127_1698298_49 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K10697 - - 0.000000000000000009321 93.0
DYD3_k127_1698298_5 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006572 421.0
DYD3_k127_1698298_50 COG NOG15344 non supervised orthologous group - - - 0.000000000000000115 82.0
DYD3_k127_1698298_51 Tetratricopeptide repeat - - - 0.0000000000000001412 84.0
DYD3_k127_1698298_52 pseudouridine synthase activity - - - 0.000000000000000286 89.0
DYD3_k127_1698298_53 - - - - 0.0000000000000009893 78.0
DYD3_k127_1698298_54 - - - - 0.000000000000009124 75.0
DYD3_k127_1698298_55 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.0000000000000167 75.0
DYD3_k127_1698298_57 Cysteine-rich secretory protein family - - - 0.000000000000566 79.0
DYD3_k127_1698298_58 branched-chain amino acid K01999 - - 0.00000000001894 77.0
DYD3_k127_1698298_6 argininosuccinate lyase K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0030312,GO:0040007,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009907 423.0
DYD3_k127_1698298_60 Cytochrome c K00406 - - 0.000000004739 63.0
DYD3_k127_1698298_61 Acetyltransferase (GNAT) family K00619 - 2.3.1.1 0.00000001165 67.0
DYD3_k127_1698298_62 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.00000006502 64.0
DYD3_k127_1698298_63 SCP-2 sterol transfer family - - - 0.0000001716 61.0
DYD3_k127_1698298_64 LAGLIDADG endonuclease - - - 0.0000003356 57.0
DYD3_k127_1698298_66 - - - - 0.000004518 54.0
DYD3_k127_1698298_7 Thiamine pyrophosphokinase C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002103 418.0
DYD3_k127_1698298_8 Aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001891 396.0
DYD3_k127_1698298_9 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0040007,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004005 368.0
DYD3_k127_1730888_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 1.552e-206 651.0
DYD3_k127_1730888_1 Mg-chelatase subunit ChlI K03405 - 6.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009916 563.0
DYD3_k127_1730888_10 tRNA processing K06864 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002612 279.0
DYD3_k127_1730888_11 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003852 289.0
DYD3_k127_1730888_12 Belongs to the P(II) protein family K04751 GO:0000166,GO:0003674,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0008144,GO:0008150,GO:0016020,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043531,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044403,GO:0044419,GO:0044464,GO:0051704,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.000000000000000000000000000000000000000000001247 167.0
DYD3_k127_1730888_13 Polysaccharide deacetylase K22278 - 3.5.1.104 0.00000000000000000000000000000000000000003706 165.0
DYD3_k127_1730888_14 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000001106 156.0
DYD3_k127_1730888_15 PFAM Peptidase family M23 - - - 0.00000000000000000000000000000000000004456 146.0
DYD3_k127_1730888_16 COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family K16048 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006066,GO:0006629,GO:0006694,GO:0006706,GO:0006707,GO:0008150,GO:0008152,GO:0008202,GO:0008203,GO:0008610,GO:0009056,GO:0009058,GO:0016042,GO:0016125,GO:0016127,GO:0016491,GO:0016645,GO:0016646,GO:0036094,GO:0042602,GO:0043167,GO:0043168,GO:0044238,GO:0044281,GO:0044282,GO:0046164,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1901615,GO:1901616,GO:1902652 - 0.0000000000000000000000000000000000002208 154.0
DYD3_k127_1730888_17 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833 - 2.6.1.62 0.000000000000000000000000000000000212 143.0
DYD3_k127_1730888_18 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.00000000000000000000000000000732 136.0
DYD3_k127_1730888_19 Protein of unknown function (DUF1232) - - - 0.00000000000000000004227 97.0
DYD3_k127_1730888_2 von Willebrand factor (vWF) type A domain - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001808 554.0
DYD3_k127_1730888_20 NIL - - - 0.00000000000006798 74.0
DYD3_k127_1730888_21 AAA domain - - - 0.00000001721 65.0
DYD3_k127_1730888_3 AlkA N-terminal domain K13529,K13530 - 3.2.2.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006669 511.0
DYD3_k127_1730888_4 TIGRFAM Ammonium transporter K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004484 481.0
DYD3_k127_1730888_5 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 445.0
DYD3_k127_1730888_6 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism K00990 - 2.7.7.59 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002248 369.0
DYD3_k127_1730888_7 Putative esterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 338.0
DYD3_k127_1730888_8 Belongs to the FPP GGPP synthase family K13787 - 2.5.1.1,2.5.1.10,2.5.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004724 293.0
DYD3_k127_1730888_9 VIT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001711 293.0
DYD3_k127_1796259_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 GO:0000428,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0030880,GO:0032991,GO:0040007,GO:0044424,GO:0044464,GO:0061695,GO:0071944,GO:1902494,GO:1990234 2.7.7.6 0.0 1090.0
DYD3_k127_1796259_1 SAF K01654 - 2.5.1.56 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 453.0
DYD3_k127_1796259_2 Virulence factor BrkB K07058 - - 0.0000000000000000000000000000000000000000000000000000006773 206.0
DYD3_k127_1796259_3 transferase activity, transferring hexosyl groups K15897 - 3.6.1.57 0.000000000000000000000000000693 120.0
DYD3_k127_1808873_0 Bacterial transcriptional activator domain - - - 3.384e-262 818.0
DYD3_k127_1808873_1 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005118 537.0
DYD3_k127_1808873_2 repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002838 476.0
DYD3_k127_1808873_3 SnoaL-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002623 270.0
DYD3_k127_1808873_4 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001014 246.0
DYD3_k127_1808873_5 DsrE/DsrF-like family K06039,K07092 - - 0.000000000000000000000000000000000000000000000000000000000000002218 218.0
DYD3_k127_1808873_6 SnoaL-like domain - - - 0.0000000000000000000000000000000000000000003533 162.0
DYD3_k127_1808873_7 Protein of unknown function (DUF4242) - - - 0.00000000000000000000000000000000000004693 143.0
DYD3_k127_1808873_8 Lysyl oxidase - - - 0.000000000000000002693 100.0
DYD3_k127_1820300_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 466.0
DYD3_k127_1820300_1 Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP K07067 - 2.7.7.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002753 415.0
DYD3_k127_1820300_10 AAA ATPase domain - - - 0.000000000000000000000000000000000000000000000002542 199.0
DYD3_k127_1820300_11 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.000000000000000000000000000000000000000003959 163.0
DYD3_k127_1820300_12 Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl- D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2- phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4- cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF) K01770,K12506 - 2.7.7.60,4.6.1.12 0.00000000000000000000000000000000005056 143.0
DYD3_k127_1820300_13 PFAM GCN5-related N-acetyltransferase - - - 0.0000000000000000000000000000000000678 152.0
DYD3_k127_1820300_14 exo-alpha-(2->6)-sialidase activity - - - 0.000000000000000000000000008473 129.0
DYD3_k127_1820300_15 Family of unknown function (DUF5317) - - - 0.00000003577 62.0
DYD3_k127_1820300_2 GMC oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001826 424.0
DYD3_k127_1820300_3 RNA polymerase sigma factor, sigma-70 family K03091 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006716 262.0
DYD3_k127_1820300_4 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009603 274.0
DYD3_k127_1820300_5 FES K03575 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001037 255.0
DYD3_k127_1820300_6 COG4956 Integral membrane protein (PIN domain superfamily) - GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000002256 253.0
DYD3_k127_1820300_7 bacterial-type flagellum-dependent cell motility - - - 0.00000000000000000000000000000000000000000000000000000000000000003038 254.0
DYD3_k127_1820300_8 CarD-like/TRCF domain K07736 - - 0.00000000000000000000000000000000000000000000000000000000008128 208.0
DYD3_k127_1820300_9 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.00000000000000000000000000000000000000000000000000000000234 213.0
DYD3_k127_1821760_0 drug exporters of the RND superfamily K06994 - - 2.067e-260 814.0
DYD3_k127_1821760_1 PFAM peptidase S8 and S53, subtilisin, kexin, sedolisin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002726 488.0
DYD3_k127_1821760_2 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000007792 238.0
DYD3_k127_1821760_3 Protein of unknown function (DUF3179) - - - 0.00000000000000000000000000000000000000000000000000000000005572 220.0
DYD3_k127_1821760_4 RNA polymerase sigma factor K03088 GO:0000988,GO:0000990,GO:0003674,GO:0005575,GO:0005618,GO:0005623,GO:0006355,GO:0006950,GO:0006979,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0016987,GO:0019219,GO:0019222,GO:0030312,GO:0031323,GO:0031326,GO:0033554,GO:0034605,GO:0043254,GO:0044087,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051252,GO:0051409,GO:0051716,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2000142,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000001055 211.0
DYD3_k127_1821760_5 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.0000000000000000000000000000000000000000000000000001349 203.0
DYD3_k127_1821760_6 PFAM nuclease (SNase K01174 - 3.1.31.1 0.0000000000000000000000000000000000000000000000001619 188.0
DYD3_k127_1821760_7 peptidase - - - 0.00000000000000002422 96.0
DYD3_k127_1821760_8 AntiSigma factor - GO:0000988,GO:0000989,GO:0003674,GO:0005488,GO:0006950,GO:0006979,GO:0008150,GO:0008270,GO:0009266,GO:0009408,GO:0009593,GO:0009628,GO:0009889,GO:0010556,GO:0016989,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0032502,GO:0042221,GO:0043167,GO:0043169,GO:0043934,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051606,GO:0051775,GO:0051776,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2001141 - 0.000000007863 62.0
DYD3_k127_1821760_9 - - - - 0.0000007273 59.0
DYD3_k127_1851476_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009057,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0030163,GO:0042623,GO:0042802,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001957 520.0
DYD3_k127_1851476_1 cellulose binding K13735 - - 0.0000000000000001162 96.0
DYD3_k127_1867821_0 Bacterial Ig-like domain (group 3) K20276 - - 0.0000000000000000000000000000000000000004348 172.0
DYD3_k127_1867821_1 - K01406 - 3.4.24.40 0.0000000000006942 78.0
DYD3_k127_1878095_0 Multicopper oxidase K00368,K07233,K22349 - 1.16.3.3,1.7.2.1 5.373e-272 888.0
DYD3_k127_1878095_1 Zn-dependent dipeptidase, microsomal dipeptidase - - - 3.324e-196 644.0
DYD3_k127_1878095_10 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.00000000000000000000000000000000000000000000000000007324 208.0
DYD3_k127_1878095_11 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor domain - - - 0.000000000000000000000000000000000000000000000000000367 201.0
DYD3_k127_1878095_12 Adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.000000000000000000000000000000000000000000001083 174.0
DYD3_k127_1878095_13 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.00000000000000000000000000000000000000007261 165.0
DYD3_k127_1878095_14 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000007717 146.0
DYD3_k127_1878095_15 O-octanoyltransferase activity - GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008374,GO:0009987,GO:0016020,GO:0016043,GO:0016414,GO:0016415,GO:0016740,GO:0016746,GO:0016747,GO:0022607,GO:0040007,GO:0043933,GO:0044085,GO:0044464,GO:0051259,GO:0051262,GO:0065003,GO:0071840,GO:0071944 - 0.0000000000000000000000000009956 123.0
DYD3_k127_1878095_16 GAF domain K02480 - 2.7.13.3 0.000000000000000000000000874 118.0
DYD3_k127_1878095_17 helix_turn_helix, mercury resistance - - - 0.000000000000004234 85.0
DYD3_k127_1878095_18 RES domain - - - 0.000000000000005965 81.0
DYD3_k127_1878095_19 - - - - 0.0000000000000129 88.0
DYD3_k127_1878095_2 pilus assembly protein ATPase CpaF K02283 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004565 603.0
DYD3_k127_1878095_20 Flp pilus assembly protein CpaB K02279 - - 0.00000000009607 71.0
DYD3_k127_1878095_21 Flp/Fap pilin component K02651 - - 0.000000007515 61.0
DYD3_k127_1878095_22 TadE-like protein - - - 0.00002077 55.0
DYD3_k127_1878095_23 Putative Flp pilus-assembly TadE/G-like - - - 0.00003038 57.0
DYD3_k127_1878095_24 Flp Fap pilin component K02651 - - 0.0004119 48.0
DYD3_k127_1878095_3 COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007438 496.0
DYD3_k127_1878095_4 chorismate binding enzyme K02361,K02552 - 5.4.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006893 290.0
DYD3_k127_1878095_5 Type II secretion system K12511 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004692 254.0
DYD3_k127_1878095_6 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002083 251.0
DYD3_k127_1878095_7 NUBPL iron-transfer P-loop NTPase K02282 - - 0.00000000000000000000000000000000000000000000000000000000000000000096 251.0
DYD3_k127_1878095_8 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000000000000002487 238.0
DYD3_k127_1878095_9 Type ii secretion system K12510 - - 0.000000000000000000000000000000000000000000000000000000000001972 235.0
DYD3_k127_1881210_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0030312,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001642 418.0
DYD3_k127_1881210_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000002793 190.0
DYD3_k127_1881257_0 Bacterial DNA polymerase III alpha subunit K14162 - 2.7.7.7 6.203e-200 644.0
DYD3_k127_1881257_1 ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004524 391.0
DYD3_k127_1881257_10 Protein of unknown function (DUF3040) - - - 0.00000000000001579 78.0
DYD3_k127_1881257_2 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001764 388.0
DYD3_k127_1881257_3 ATPases associated with a variety of cellular activities K11710,K19973 - 3.6.3.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003433 322.0
DYD3_k127_1881257_4 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 322.0
DYD3_k127_1881257_5 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000000000000000000000000000000001398 226.0
DYD3_k127_1881257_6 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.00000000000000000000000000000000000000000000000000000006705 216.0
DYD3_k127_1881257_7 PFAM transglutaminase domain protein - - - 0.000000000000000000000000000000000000000000000000000003664 217.0
DYD3_k127_1881257_8 Belongs to the enoyl-CoA hydratase isomerase family - GO:0003674,GO:0003824,GO:0004300,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0019395,GO:0019752,GO:0030258,GO:0032787,GO:0034440,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:1901575 - 0.0000000000000000000000000000000000000000000000001185 186.0
DYD3_k127_1881257_9 helix_turn_helix, mercury resistance - - - 0.000000000000000000000000002898 118.0
DYD3_k127_1892132_0 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 3.934e-238 745.0
DYD3_k127_1892132_1 Thiolase, C-terminal domain K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005681 504.0
DYD3_k127_1892132_10 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.00000000000006514 83.0
DYD3_k127_1892132_11 Protein conserved in bacteria - - - 0.00000000001467 71.0
DYD3_k127_1892132_2 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003781 321.0
DYD3_k127_1892132_3 Dehydrogenase K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000361 261.0
DYD3_k127_1892132_4 ThiJ PfpI - - - 0.000000000000000000000000000000000000000000000000000000000000000003915 231.0
DYD3_k127_1892132_5 Glycosyltransferase Family 4 K13668 - 2.4.1.346 0.000000000000000000000000000000000000000000000000000000000000007293 231.0
DYD3_k127_1892132_6 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000491 213.0
DYD3_k127_1892132_7 PFAM Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.0000000000000000000000000000000000000000001728 173.0
DYD3_k127_1892132_8 ATP- GTP-binding protein - - - 0.000000000000000009738 87.0
DYD3_k127_1892132_9 - - - - 0.00000000000005011 81.0
DYD3_k127_1906768_0 Enoyl-CoA hydratase/isomerase K01692 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 373.0
DYD3_k127_1906768_1 Allophanate hydrolase subunit 2 K06350 - - 0.000000000000000000000000000000000000000000000000000003652 208.0
DYD3_k127_1906768_2 LamB/YcsF family K07160 - - 0.000000000000000000000000000000000000000000000000000005188 213.0
DYD3_k127_1906768_3 Belongs to the FPG family K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000000000001245 198.0
DYD3_k127_1906768_4 Allophanate hydrolase subunit 1 - - - 0.00000000000000000000000000000000000000000000000003815 184.0
DYD3_k127_1906768_5 Zinc carboxypeptidase - - - 0.000000000000000007972 98.0
DYD3_k127_1906768_6 - - - - 0.0000000000000008313 79.0
DYD3_k127_1906768_7 PFAM blue (type 1) copper domain protein - - - 0.0002279 49.0
DYD3_k127_1911297_0 Alcohol dehydrogenase GroES-like domain K00001,K14446,K17829 - 1.1.1.1,1.3.1.85,1.3.1.86 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 597.0
DYD3_k127_1911297_1 Peptidase S9 prolyl oligopeptidase active site K01278,K01322 - 3.4.14.5,3.4.21.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008166 518.0
DYD3_k127_1911297_2 Thiolase, N-terminal domain K00626,K00632 - 2.3.1.16,2.3.1.9 0.00000000000000000000000000000000000000000000000001339 180.0
DYD3_k127_1911297_3 Winged helix DNA-binding domain - - - 0.000000000000000000278 96.0
DYD3_k127_1944193_0 - - - - 3.644e-204 665.0
DYD3_k127_1944193_1 ATPase family associated with various cellular activities (AAA) K06027 - 3.6.4.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001178 378.0
DYD3_k127_1944193_2 Adenylate K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 327.0
DYD3_k127_1944193_3 Belongs to the ompA family K20276 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001812 276.0
DYD3_k127_1944193_4 Glycogen debranching enzyme - - - 0.000000000000000000000000000000000000000000000000000000001969 227.0
DYD3_k127_1944193_5 ubiE/COQ5 methyltransferase family K15942 - 2.1.1.288 0.0001479 46.0
DYD3_k127_2021331_0 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006065 305.0
DYD3_k127_2021331_1 Participates in transcription elongation, termination and antitermination K02601 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0016020,GO:0019219,GO:0019222,GO:0030312,GO:0031323,GO:0031326,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000006868 235.0
DYD3_k127_2021331_2 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000004945 216.0
DYD3_k127_2021331_3 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000001902 158.0
DYD3_k127_2021331_4 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000302 143.0
DYD3_k127_2021331_5 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000156 124.0
DYD3_k127_2021331_6 Protein of unknown function (DUF559) - - - 0.00000000000000000009891 102.0
DYD3_k127_2021331_7 P-P-bond-hydrolysis-driven protein transmembrane transporter activity K03073 GO:0002790,GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0031522,GO:0032940,GO:0032978,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0042887,GO:0043952,GO:0044425,GO:0044459,GO:0044464,GO:0045047,GO:0045184,GO:0046903,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.00000000007074 66.0
DYD3_k127_2027371_0 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.0000000000000000000000000000005962 143.0
DYD3_k127_2027371_1 belongs to the sigma-70 factor family, ECF subfamily - - - 0.0000000000000000000002592 104.0
DYD3_k127_2027371_2 TIGRFAM Outer membrane protein K20276 - - 0.00000000000000000008403 106.0
DYD3_k127_2043022_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0003674,GO:0003824,GO:0004812,GO:0004825,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006431,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001653 607.0
DYD3_k127_2043022_1 NADPH:quinone reductase activity K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 452.0
DYD3_k127_2043022_10 Domain of unknown function (DUF4352) - - - 0.0001574 51.0
DYD3_k127_2043022_2 TatD related DNase K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001291 253.0
DYD3_k127_2043022_3 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0070677,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000000167 253.0
DYD3_k127_2043022_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003197 258.0
DYD3_k127_2043022_5 Neutral/alkaline non-lysosomal ceramidase, C-terminal K12349 - 3.5.1.23 0.000000000000000000000000000000000000000000000000000001598 215.0
DYD3_k127_2043022_6 PFAM glycosyl transferase family 39 K00728 - 2.4.1.109 0.00000000000000000000000000000000000000000002404 186.0
DYD3_k127_2043022_7 Subtilase family K17734 - - 0.0000000000000000000000000000952 128.0
DYD3_k127_2043022_8 Transcriptional regulator, AbrB family K06284 - - 0.0000000000000008895 91.0
DYD3_k127_2043022_9 G5 K21688 - - 0.00004968 51.0
DYD3_k127_2047012_0 - - - - 0.00000000000000000000000000000000000001523 151.0
DYD3_k127_2047012_1 Protein of unknown function (DUF559) - - - 0.00000000000000000000000000006385 128.0
DYD3_k127_2047012_2 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 0.0000000108 56.0
DYD3_k127_2063097_0 Catalyzes the oxidative sulfurization of hercynine (N- alpha,N-alpha,N-alpha-trimethyl-L-histidine) into hercynyl-gamma- L-glutamyl-L-cysteine sulfoxide, a step in the biosynthesis pathway of ergothioneine K18912 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0006082,GO:0006520,GO:0006547,GO:0006548,GO:0006575,GO:0006577,GO:0006578,GO:0006725,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009987,GO:0016053,GO:0016054,GO:0016491,GO:0019439,GO:0019752,GO:0034641,GO:0042398,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044272,GO:0044281,GO:0044282,GO:0044283,GO:0046394,GO:0046395,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0052698,GO:0052699,GO:0052701,GO:0052703,GO:0052704,GO:0052708,GO:0052803,GO:0052805,GO:0055114,GO:0071704,GO:0097164,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606 1.14.99.50 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005592 526.0
DYD3_k127_2063097_1 Glutamate-cysteine ligase family 2(GCS2) K01919 - 6.3.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000182 316.0
DYD3_k127_2063097_2 Catalyzes the hydrolysis of the gamma-glutamyl amide bond of hercynyl-gamma-L-glutamyl-L-cysteine sulfoxide to produce hercynylcysteine sulfoxide, a step in the biosynthesis pathway of ergothioneine K07008 GO:0000096,GO:0000097,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006082,GO:0006518,GO:0006520,GO:0006547,GO:0006548,GO:0006575,GO:0006577,GO:0006578,GO:0006725,GO:0006749,GO:0006751,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009987,GO:0016020,GO:0016053,GO:0016054,GO:0019439,GO:0019752,GO:0032991,GO:0034641,GO:0042219,GO:0042398,GO:0043171,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044272,GO:0044273,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046395,GO:0046483,GO:0046700,GO:0051186,GO:0051187,GO:0052698,GO:0052699,GO:0052701,GO:0052703,GO:0052704,GO:0052708,GO:0052803,GO:0052805,GO:0061672,GO:0071704,GO:0071944,GO:0097164,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1902494,GO:1905368 3.5.1.118 0.000000000000000000001711 103.0
DYD3_k127_2133036_0 Adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000276 642.0
DYD3_k127_2133036_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001383 284.0
DYD3_k127_2133036_10 Evidence 4 Homologs of previously reported genes of - - - 0.000000000000000000000000000000001718 140.0
DYD3_k127_2133036_11 Peptidase family M50 - - - 0.00000000000000000000000000001797 133.0
DYD3_k127_2133036_12 GCN5-related N-acetyl-transferase K06975 - - 0.0000000000000000000000002057 112.0
DYD3_k127_2133036_13 Extracellular repeat protein, HAF family - - - 0.00000000000000000000003589 116.0
DYD3_k127_2133036_14 Methyltransferase domain K15942 - 2.1.1.288 0.000000000000000000003111 104.0
DYD3_k127_2133036_15 Cellulase (glycosyl hydrolase family 5) K01179 - 3.2.1.4 0.0000000000001253 85.0
DYD3_k127_2133036_16 - - - - 0.000000000003393 74.0
DYD3_k127_2133036_17 Belongs to the universal stress protein A family - - - 0.00000002623 64.0
DYD3_k127_2133036_18 Belongs to the ompA family - - - 0.000003833 59.0
DYD3_k127_2133036_2 TIGRFAM RecB family nuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001106 272.0
DYD3_k127_2133036_20 amino acid K03294 - - 0.0007134 51.0
DYD3_k127_2133036_3 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000008195 235.0
DYD3_k127_2133036_4 Dienelactone hydrolase family K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000005943 203.0
DYD3_k127_2133036_5 ADP binding - - - 0.0000000000000000000000000000000000000000000002082 190.0
DYD3_k127_2133036_6 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000000000000000000000000000000000072 179.0
DYD3_k127_2133036_7 Thioesterase superfamily - - - 0.00000000000000000000000000000000000002287 148.0
DYD3_k127_2133036_8 Protein of unknown function (DUF664) - - - 0.00000000000000000000000000000000000433 150.0
DYD3_k127_2133036_9 Rieske [2Fe-2S] domain - - - 0.000000000000000000000000000000000236 148.0
DYD3_k127_2153608_0 Ribulose bisphosphate carboxylase large chain, catalytic domain K01601,K08965 - 4.1.1.39,5.3.2.5 1.418e-247 772.0
DYD3_k127_2153608_1 Transketolase, thiamine diphosphate binding domain K00615 - 2.2.1.1 9.204e-236 763.0
DYD3_k127_2153608_10 PFAM Ribulose bisphosphate carboxylase, small chain K01602 - 4.1.1.39 0.00000000000000000000000000000000000000000000000003812 194.0
DYD3_k127_2153608_11 Bacterial regulatory helix-turn-helix protein, lysR family K21703 - - 0.0000000000000000000000000000000000000000000000003594 187.0
DYD3_k127_2153608_12 PFAM ATP-binding region, ATPase-like histidine kinase, HAMP region histidine kinase A-like PAS fold-4 K02484 - 2.7.13.3 0.0000000000000000000000000000000000000009663 157.0
DYD3_k127_2153608_13 IrrE N-terminal-like domain - - - 0.00001881 53.0
DYD3_k127_2153608_2 Pyruvate 2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit K00162 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 424.0
DYD3_k127_2153608_3 TIGRFAM Glyceraldehyde-3-phosphate dehydrogenase, type I K00134 - 1.2.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005099 357.0
DYD3_k127_2153608_4 e3 binding domain K00627 - 2.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004174 365.0
DYD3_k127_2153608_5 Dehydrogenase E1 component K00161,K00166 - 1.2.4.1,1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 344.0
DYD3_k127_2153608_6 Belongs to the Glu Leu Phe Val dehydrogenases family K00263 - 1.4.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004429 337.0
DYD3_k127_2153608_7 Rossmann fold nucleotide-binding protein K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000197 332.0
DYD3_k127_2153608_8 Phosphoribulokinase / Uridine kinase family K00855 - 2.7.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003118 324.0
DYD3_k127_2153608_9 AIR synthase related protein, C-terminal domain K01933 - 6.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004801 294.0
DYD3_k127_219815_0 AMP-binding enzyme C-terminal domain - - - 1.74e-201 653.0
DYD3_k127_219815_1 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003507 563.0
DYD3_k127_219815_10 Rubredoxin-like zinc ribbon domain (DUF35_N) - - - 0.0000000000000000000000000000002294 130.0
DYD3_k127_219815_11 MaoC like domain - - - 0.00000000000000000000000000001457 129.0
DYD3_k127_219815_12 ATPases associated with a variety of cellular activities K01995 - - 0.00000000000000000000000000002444 138.0
DYD3_k127_219815_13 Belongs to the short-chain dehydrogenases reductases (SDR) family K00059 - 1.1.1.100 0.000000000000000000000000001456 122.0
DYD3_k127_219815_14 Sigma-70, region 4 - - - 0.00000000000000000000004626 106.0
DYD3_k127_219815_15 PFAM Neutral alkaline nonlysosomal ceramidase - - - 0.00000000000000000001086 107.0
DYD3_k127_219815_16 Nuclease-related domain - - - 0.00000000000000006602 89.0
DYD3_k127_219815_17 Branched-chain amino acid transport system / permease component K01997,K01998 - - 0.000000000000001221 91.0
DYD3_k127_219815_18 Matrixin - - - 0.00001899 57.0
DYD3_k127_219815_2 Acetyl-CoA acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 506.0
DYD3_k127_219815_3 MmgE PrpD family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005183 356.0
DYD3_k127_219815_4 Cleaves both 3' and 5' ssDNA extremities of branched DNA structures K07503 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002389 256.0
DYD3_k127_219815_5 Belongs to the HpcH HpaI aldolase family K01644 - 4.1.3.34 0.000000000000000000000000000000000000000000000000000000000000000000002464 246.0
DYD3_k127_219815_6 major facilitator superfamily K08226 - - 0.00000000000000000000000000000000000000000000000002319 207.0
DYD3_k127_219815_7 N-terminal half of MaoC dehydratase - - - 0.000000000000000000000000000000000000000000000002693 196.0
DYD3_k127_219815_8 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000001635 179.0
DYD3_k127_219815_9 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.000000000000000000000000000000000001856 161.0
DYD3_k127_2200248_0 Peptidoglycan-binding domain 1 protein - - - 0.0000000000000000000000000000000000000000000000002919 196.0
DYD3_k127_2200248_1 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000000000000000000000000003994 145.0
DYD3_k127_2200248_2 Berberine and berberine like - - - 0.00000000000000007349 86.0
DYD3_k127_2200846_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 1.434e-296 924.0
DYD3_k127_2200846_1 Protein synonym NADH dehydrogenase I subunit M K00342 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002189 567.0
DYD3_k127_2200846_10 COG0189 Glutathione synthase Ribosomal protein S6 modification enzyme (glutaminyl transferase) - - - 0.00000000000000000000000000000000000000000000000000000000000000025 231.0
DYD3_k127_2200846_11 Response regulator receiver domain protein - - - 0.0000000000000000000000000000000000000000000000000000001843 202.0
DYD3_k127_2200846_12 Belongs to the UPF0234 family K09767 - - 0.0000000000000000000000000000000000000000000000000002081 190.0
DYD3_k127_2200846_13 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00330 - 1.6.5.3 0.0000000000000000000000000000000000000000001013 163.0
DYD3_k127_2200846_14 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000000000000000001612 181.0
DYD3_k127_2200846_15 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339,K05578 - 1.6.5.3 0.0000000000000000000000000000000000005461 145.0
DYD3_k127_2200846_16 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00332 - 1.6.5.3 0.00000000000000000000000000000000002024 140.0
DYD3_k127_2200846_17 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0008137,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.000000000000000000000000002864 115.0
DYD3_k127_2200846_18 PFAM Peptidase family M23 K21472 - - 0.0000000000000000000000488 114.0
DYD3_k127_2200846_19 Ribosomal protein L33 K02913 - - 0.0000000000000002976 81.0
DYD3_k127_2200846_2 4Fe-4S binding domain K07307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 514.0
DYD3_k127_2200846_20 methyltransferase - - - 0.00000000000003234 85.0
DYD3_k127_2200846_21 Predicted integral membrane protein (DUF2269) - - - 0.000002134 56.0
DYD3_k127_2200846_3 Subunit A of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali K00341 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001387 476.0
DYD3_k127_2200846_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006877 440.0
DYD3_k127_2200846_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003461 393.0
DYD3_k127_2200846_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004896 385.0
DYD3_k127_2200846_7 Belongs to the peptidase M48B family K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 298.0
DYD3_k127_2200846_8 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000122 277.0
DYD3_k127_2200846_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000006794 252.0
DYD3_k127_2206046_0 Carboxyl transferase domain - - - 2.775e-208 661.0
DYD3_k127_2206046_1 COG2931, RTX toxins and related Ca2 -binding proteins K20276 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006205 357.0
DYD3_k127_2206046_10 Family of unknown function (DUF5317) - - - 0.000000000000006369 82.0
DYD3_k127_2206046_11 Protein of unknown function (DUF3105) - - - 0.00000000001565 72.0
DYD3_k127_2206046_12 TIGRFAM DNA binding domain protein, excisionase family - - - 0.0000000007877 64.0
DYD3_k127_2206046_13 Transcriptional regulator K08282,K13419 - 2.7.11.1 0.000000002416 65.0
DYD3_k127_2206046_2 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000002669 238.0
DYD3_k127_2206046_3 Peptidase family S58 K01266 - 3.4.11.19 0.000000000000000000000000000000000000000000000000000000000001827 220.0
DYD3_k127_2206046_4 histidine kinase, dimerisation phosphoacceptor K00936 GO:0000155,GO:0000160,GO:0000166,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0005488,GO:0005524,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0017076,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035556,GO:0035639,GO:0036094,GO:0036211,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564 2.7.13.3 0.0000000000000000000000000000000000000000031 171.0
DYD3_k127_2206046_5 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.0000000000000000000000000000000000001914 142.0
DYD3_k127_2206046_6 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.000000000000000000000000000002326 136.0
DYD3_k127_2206046_7 - - - - 0.0000000000000000000005013 106.0
DYD3_k127_2206046_8 Biotin lipoyl attachment domain-containing protein - - - 0.000000000000000000005159 96.0
DYD3_k127_2206046_9 Domain of unknown function (DUF2017) - - - 0.000000000000001142 88.0
DYD3_k127_2240616_0 acyl-CoA dehydrogenase K09456 - - 6.458e-223 707.0
DYD3_k127_2240616_1 DNA helicase K03654 - 3.6.4.12 7.507e-218 696.0
DYD3_k127_2240616_10 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 351.0
DYD3_k127_2240616_11 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001469 337.0
DYD3_k127_2240616_12 Multicopper oxidase K00368 - 1.7.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005042 329.0
DYD3_k127_2240616_13 Phosphotransferase enzyme family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003517 321.0
DYD3_k127_2240616_14 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009603 320.0
DYD3_k127_2240616_15 Transmembrane secretion effector - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003931 297.0
DYD3_k127_2240616_16 PFAM Fatty acid desaturase K00507 - 1.14.19.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008022 291.0
DYD3_k127_2240616_17 Serine phosphatase RsbU, regulator of sigma subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001346 303.0
DYD3_k127_2240616_18 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001585 253.0
DYD3_k127_2240616_19 belongs to the sigma-70 factor family K03090 GO:0000988,GO:0000990,GO:0003674,GO:0005488,GO:0005515,GO:0006355,GO:0006629,GO:0006950,GO:0006979,GO:0006995,GO:0007154,GO:0008150,GO:0008152,GO:0009266,GO:0009267,GO:0009409,GO:0009605,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0009991,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016987,GO:0019219,GO:0019222,GO:0019899,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0034059,GO:0036293,GO:0042221,GO:0042594,GO:0043175,GO:0043254,GO:0043562,GO:0044087,GO:0044238,GO:0045893,GO:0045935,GO:0046677,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051716,GO:0060255,GO:0065007,GO:0070063,GO:0070417,GO:0070482,GO:0071496,GO:0071704,GO:0080090,GO:0140110,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2000142,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000001471 249.0
DYD3_k127_2240616_2 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001259 559.0
DYD3_k127_2240616_20 KR domain K00065 - 1.1.1.127 0.000000000000000000000000000000000000000000000000000000000000001835 231.0
DYD3_k127_2240616_21 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000000000000000000000000000009422 220.0
DYD3_k127_2240616_22 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000001703 218.0
DYD3_k127_2240616_23 DsrE/DsrF/DrsH-like family - - - 0.000000000000000000000000000000000000000000000000005457 192.0
DYD3_k127_2240616_24 - - - - 0.0000000000000000000000000000000000000000000000006045 186.0
DYD3_k127_2240616_25 Methyltransferase - - - 0.0000000000000000000000000000000000000000000002758 178.0
DYD3_k127_2240616_26 Catalyzes the hydrolysis of the gamma-glutamyl amide bond of hercynyl-gamma-L-glutamyl-L-cysteine sulfoxide to produce hercynylcysteine sulfoxide, a step in the biosynthesis pathway of ergothioneine K07008 GO:0000096,GO:0000097,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006082,GO:0006518,GO:0006520,GO:0006547,GO:0006548,GO:0006575,GO:0006577,GO:0006578,GO:0006725,GO:0006749,GO:0006751,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009987,GO:0016020,GO:0016053,GO:0016054,GO:0019439,GO:0019752,GO:0032991,GO:0034641,GO:0042219,GO:0042398,GO:0043171,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044272,GO:0044273,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046395,GO:0046483,GO:0046700,GO:0051186,GO:0051187,GO:0052698,GO:0052699,GO:0052701,GO:0052703,GO:0052704,GO:0052708,GO:0052803,GO:0052805,GO:0061672,GO:0071704,GO:0071944,GO:0097164,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1902494,GO:1905368 3.5.1.118 0.000000000000000000000000000000000000000000000717 173.0
DYD3_k127_2240616_27 SnoaL-like domain - - - 0.0000000000000000000000000000000000000000000009241 171.0
DYD3_k127_2240616_28 Anti-sigma factor - - - 0.000000000000000000000000000000000000000000002243 181.0
DYD3_k127_2240616_29 PucR C-terminal helix-turn-helix domain - - - 0.00000000000000000000000000000000000000000006734 184.0
DYD3_k127_2240616_3 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003247 505.0
DYD3_k127_2240616_30 - - - - 0.000000000000000000000000000000000000000001884 160.0
DYD3_k127_2240616_31 Cupin domain - - - 0.000000000000000000000000000008748 121.0
DYD3_k127_2240616_32 Belongs to the anti-sigma-factor antagonist family K04749 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.00000000000000000000000002465 123.0
DYD3_k127_2240616_33 PAS domain - - - 0.00000000000000000000000009983 124.0
DYD3_k127_2240616_34 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000001696 113.0
DYD3_k127_2240616_35 Multicopper oxidase K00368 - 1.7.2.1 0.0000000000000000000001904 113.0
DYD3_k127_2240616_36 sulfur carrier activity - - - 0.0000000000000000000005069 97.0
DYD3_k127_2240616_37 DsrE/DsrF-like family - - - 0.00000000000000000000764 99.0
DYD3_k127_2240616_38 Cys-tRNA(Pro) hydrolase activity K09759,K19055 GO:0002161,GO:0002196,GO:0003674,GO:0003824,GO:0006139,GO:0006399,GO:0006417,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0016070,GO:0016787,GO:0016788,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0034248,GO:0034250,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0045727,GO:0045903,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0052689,GO:0060255,GO:0065007,GO:0065008,GO:0071704,GO:0080090,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360,GO:2000112 6.1.1.23 0.00000000000000000005537 100.0
DYD3_k127_2240616_39 - - - - 0.00000000000000002507 96.0
DYD3_k127_2240616_4 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003498 449.0
DYD3_k127_2240616_40 Belongs to the sulfur carrier protein TusA family K04085 - - 0.00000000000000009875 87.0
DYD3_k127_2240616_41 - - - - 0.0000000000000001856 87.0
DYD3_k127_2240616_42 PFAM blue (type 1) copper domain protein K00368,K02638 - 1.7.2.1 0.0000000000000002312 93.0
DYD3_k127_2240616_43 anti-sigma regulatory factor - - - 0.000000000000004139 81.0
DYD3_k127_2240616_44 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000001427 83.0
DYD3_k127_2240616_45 - - - - 0.000000000001661 74.0
DYD3_k127_2240616_46 superoxide dismutase activity K02674,K04565 - 1.15.1.1 0.00000000001237 72.0
DYD3_k127_2240616_47 anti-sigma regulatory factor K04757 GO:0000166,GO:0000988,GO:0000989,GO:0003674,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016989,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0036094,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901265,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 2.7.11.1 0.0000000000162 69.0
DYD3_k127_2240616_48 Iron-storage protein, whose ferroxidase center binds Fe(2 ) ions, oxidizes them by dioxygen to Fe(3 ), and participates in the subsequent Fe(3 ) oxide mineral core formation within the central cavity of the protein complex K03594 - 1.16.3.1 0.000000000219 68.0
DYD3_k127_2240616_49 Belongs to the universal stress protein A family - - - 0.0000001138 59.0
DYD3_k127_2240616_5 COG0655 Multimeric flavodoxin WrbA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002535 418.0
DYD3_k127_2240616_50 alpha beta - - - 0.000001455 61.0
DYD3_k127_2240616_51 - - - - 0.00002531 53.0
DYD3_k127_2240616_52 Histidine Phosphotransfer domain K03407 - 2.7.13.3 0.0000707 51.0
DYD3_k127_2240616_6 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 424.0
DYD3_k127_2240616_7 Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine K18911 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006082,GO:0006464,GO:0006479,GO:0006520,GO:0006547,GO:0006548,GO:0006575,GO:0006577,GO:0006578,GO:0006725,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008213,GO:0008276,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009987,GO:0016020,GO:0016053,GO:0016054,GO:0016740,GO:0016741,GO:0019439,GO:0019538,GO:0019752,GO:0032259,GO:0034641,GO:0036211,GO:0042398,GO:0043170,GO:0043412,GO:0043414,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044270,GO:0044271,GO:0044272,GO:0044281,GO:0044282,GO:0044283,GO:0044464,GO:0046394,GO:0046395,GO:0046483,GO:0046700,GO:0052698,GO:0052699,GO:0052701,GO:0052703,GO:0052704,GO:0052707,GO:0052708,GO:0052709,GO:0052803,GO:0052805,GO:0071704,GO:0071944,GO:0097164,GO:0140096,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607 2.1.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000195 393.0
DYD3_k127_2240616_8 membrane protein terC K05794 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002851 370.0
DYD3_k127_2240616_9 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001751 362.0
DYD3_k127_2247184_0 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003632 307.0
DYD3_k127_2247184_1 - - - - 0.0000000000000000000000000000000000000000000000004238 182.0
DYD3_k127_2247184_2 integral membrane protein TIGR02587 - - - 0.00000000000000000000000000000000001484 145.0
DYD3_k127_2247184_3 Lysin motif - - - 0.0000000000000000000000000002536 123.0
DYD3_k127_2247184_4 - - - - 0.00000000000000000002531 93.0
DYD3_k127_2247184_5 SnoaL-like domain K06893 - - 0.000000000000000008249 88.0
DYD3_k127_2247184_6 - - - - 0.0000000000002777 70.0
DYD3_k127_2247184_7 Peptidase s1 and s6 chymotrypsin hap K18547 - - 0.000000000001053 81.0
DYD3_k127_2247184_8 CarboxypepD_reg-like domain K13276,K17734 - - 0.0000000009437 70.0
DYD3_k127_2247184_9 BNR Asp-box repeat K01186 - 3.2.1.18 0.00005455 56.0
DYD3_k127_2253082_0 UvrD-like helicase C-terminal domain K03657 GO:0000018,GO:0000166,GO:0000287,GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009650,GO:0009892,GO:0009987,GO:0010605,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0030312,GO:0030554,GO:0031323,GO:0031324,GO:0032392,GO:0032508,GO:0032552,GO:0032554,GO:0032558,GO:0032564,GO:0032991,GO:0033202,GO:0033554,GO:0034641,GO:0036094,GO:0040007,GO:0042623,GO:0043138,GO:0043140,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0045910,GO:0045934,GO:0046483,GO:0046872,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051276,GO:0051716,GO:0060255,GO:0060542,GO:0060543,GO:0065007,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:0140097,GO:1901265,GO:1901360,GO:1901363,GO:1902494 3.6.4.12 2.254e-238 757.0
DYD3_k127_2253082_1 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0005575,GO:0005618,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030312,GO:0034404,GO:0034641,GO:0034654,GO:0040007,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 5.577e-228 715.0
DYD3_k127_2253082_10 with the alpha beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000002262 205.0
DYD3_k127_2253082_11 Methylmalonyl-CoA mutase K01849 - 5.4.99.2 0.0000000000000000000000000000000000000000000000000002994 194.0
DYD3_k127_2253082_12 PAS domain - - - 0.0000000000000000000000000000000000000000000326 180.0
DYD3_k127_2253082_13 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000002073 177.0
DYD3_k127_2253082_14 PFAM MgtC SapB transporter K07507 - - 0.00000000000000000000000000000000003556 139.0
DYD3_k127_2253082_15 copper resistance D domain protein K14166 - - 0.000000000000000000000000000001781 139.0
DYD3_k127_2253082_16 metallopeptidase activity - - - 0.0000000000000000000008213 106.0
DYD3_k127_2253082_17 - - - - 0.0000000000000000000245 105.0
DYD3_k127_2253082_18 - - - - 0.00000000000000000068 95.0
DYD3_k127_2253082_19 response regulator receiver - - - 0.000000000000000007686 96.0
DYD3_k127_2253082_2 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001457 637.0
DYD3_k127_2253082_20 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.0000000000005309 82.0
DYD3_k127_2253082_21 Nodulation protein S (NodS) - - - 0.00000004816 58.0
DYD3_k127_2253082_23 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.000003517 51.0
DYD3_k127_2253082_3 IMP dehydrogenase / GMP reductase domain K00088 - 1.1.1.205 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003709 578.0
DYD3_k127_2253082_4 CoA-transferase family III K14470 - 5.4.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002086 547.0
DYD3_k127_2253082_5 PFAM FAD linked oxidase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002417 521.0
DYD3_k127_2253082_6 catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the K01962,K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000312 349.0
DYD3_k127_2253082_7 Acyl dehydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 323.0
DYD3_k127_2253082_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006662 281.0
DYD3_k127_2253082_9 Predicted membrane protein (DUF2207) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004871 286.0
DYD3_k127_2296479_0 PFAM aminotransferase, class I K10907 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009607 520.0
DYD3_k127_2296479_1 AMP-binding enzyme K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004427 529.0
DYD3_k127_2296479_2 chloride channel K03281 - - 0.0000000000000000000000000000000000000000000000000000000000000003347 242.0
DYD3_k127_2296479_3 trisaccharide binding - - - 0.00000000000000000000000000000000000000000000000000000000483 207.0
DYD3_k127_2296479_4 Sugar (and other) transporter - - - 0.000000000000000000000000000000000000000000308 169.0
DYD3_k127_2296479_5 Acetyltransferase (GNAT) domain - - - 0.00000000004026 70.0
DYD3_k127_2304900_0 peptidase activity, acting on L-amino acid peptides K13735,K20276,K21449 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001781 635.0
DYD3_k127_2304900_1 Cellulase (glycosyl hydrolase family 5) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001005 299.0
DYD3_k127_2304900_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000004073 233.0
DYD3_k127_2304900_4 GlcNAc-PI de-N-acetylase K22135 - - 0.00000000000000000000000000000000000000000000000000000000002203 227.0
DYD3_k127_2304900_5 Anti-sigma-K factor rskA - - - 0.000000002986 61.0
DYD3_k127_2304900_6 Multicopper oxidase K06324 - 1.16.3.3 0.0005426 49.0
DYD3_k127_2317092_0 PFAM Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007204 584.0
DYD3_k127_2317092_1 oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007379 397.0
DYD3_k127_2317092_10 Protein of unknown function (DUF523) K03783 - 2.4.2.1 0.00000000000000000000000000000000000000000000004643 174.0
DYD3_k127_2317092_11 Phage derived protein Gp49-like (DUF891) - - - 0.0000000000000000000000000000000000000004264 151.0
DYD3_k127_2317092_12 PFAM Adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.000000000000000000000000000000000005051 160.0
DYD3_k127_2317092_13 addiction module antidote protein HigA K21498 - - 0.0000000000000000000000000000000005381 132.0
DYD3_k127_2317092_14 RelE-like toxin of type II toxin-antitoxin system HigB K07334 - - 0.0000000000000000000000000000006629 124.0
DYD3_k127_2317092_15 - - - - 0.0000000000000000000000002116 107.0
DYD3_k127_2317092_16 DinB superfamily - - - 0.0000000000000000000004194 106.0
DYD3_k127_2317092_17 Acetyltransferase (GNAT) domain - - - 0.000000000000000000007752 101.0
DYD3_k127_2317092_18 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.00000000000000000002927 106.0
DYD3_k127_2317092_19 flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase - - - 0.00000000000000000006045 94.0
DYD3_k127_2317092_2 nitroreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002739 326.0
DYD3_k127_2317092_20 Helix-turn-helix XRE-family like proteins - - - 0.00000000000000005291 85.0
DYD3_k127_2317092_21 Acetyltransferase (GNAT) domain - - - 0.0000000000000001835 91.0
DYD3_k127_2317092_22 glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000002328 78.0
DYD3_k127_2317092_23 - - - - 0.000000003148 62.0
DYD3_k127_2317092_24 PFAM Plasmid stabilisation system protein - - - 0.00000001245 58.0
DYD3_k127_2317092_25 Carbohydrate esterase family 3 protein - - - 0.0002942 54.0
DYD3_k127_2317092_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002027 331.0
DYD3_k127_2317092_4 Phosphoenolpyruvate phosphomutase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 311.0
DYD3_k127_2317092_5 Penicillin acylase K01434 - 3.5.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003191 310.0
DYD3_k127_2317092_6 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002769 285.0
DYD3_k127_2317092_7 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000001239 253.0
DYD3_k127_2317092_8 PFAM AhpC TSA family K03386 GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016684,GO:0020012,GO:0030682,GO:0042221,GO:0043207,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051409,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0051805,GO:0051807,GO:0051832,GO:0051834,GO:0051920,GO:0052060,GO:0052173,GO:0052200,GO:0052376,GO:0052551,GO:0052564,GO:0052565,GO:0052572,GO:0055114,GO:0070887,GO:0075136,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.11.1.15 0.00000000000000000000000000000000000000000000002695 175.0
DYD3_k127_2317092_9 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.00000000000000000000000000000000000000000000004415 182.0
DYD3_k127_2343587_0 Peptidase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 533.0
DYD3_k127_2343587_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002661 321.0
DYD3_k127_2343587_2 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000002637 246.0
DYD3_k127_2343587_3 PFAM zinc iron permease K16267 - - 0.00000000000000000000000000000000000000000000000009009 199.0
DYD3_k127_2343587_4 PFAM Peptidase family M23 K21471 - - 0.00000000000000000000000000000000000000004617 167.0
DYD3_k127_2343587_5 heme binding K21471,K21472 - - 0.0000000000000000000000008135 116.0
DYD3_k127_2343587_7 Uncharacterized conserved protein (DUF2277) - - - 0.000000000000000004259 89.0
DYD3_k127_2343587_8 Sigma-70, region 4 K03088 - - 0.000000000000005253 87.0
DYD3_k127_242394_0 PFAM glycosyl transferase family 51 K05366,K21464 - 2.4.1.129,3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009644 452.0
DYD3_k127_242394_1 Elongation factor SelB, winged helix K03833 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 421.0
DYD3_k127_242394_10 Membrane-bound serine protease (ClpP class) K07403 - - 0.0000000000000000000000000000000000001259 158.0
DYD3_k127_242394_11 Belongs to the PstS family K02040 - - 0.0000000000000000000000000000000000006511 156.0
DYD3_k127_242394_12 Yqey-like protein K09117 - - 0.0000000000000000000000000000000006897 145.0
DYD3_k127_242394_13 Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA K18955 - - 0.000000000000000002094 92.0
DYD3_k127_242394_14 - - - - 0.000000000004961 69.0
DYD3_k127_242394_15 Beta-propeller repeat - - - 0.000000009558 69.0
DYD3_k127_242394_16 cGMP-dependent protein kinase activity K10273,K10577,K19477 - 2.7.11.12 0.000001061 60.0
DYD3_k127_242394_2 PFAM Anion-transporting ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006836 344.0
DYD3_k127_242394_3 PFAM Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001376 299.0
DYD3_k127_242394_4 Glycerophosphoryl diester phosphodiesterase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000198 284.0
DYD3_k127_242394_5 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000207 267.0
DYD3_k127_242394_6 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004595 281.0
DYD3_k127_242394_7 Calcineurin-like phosphoesterase K07098 - - 0.00000000000000000000000000000000000000000000000000000000000002219 234.0
DYD3_k127_242394_8 PFAM Anion-transporting ATPase - GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000006541 217.0
DYD3_k127_242394_9 translation initiation inhibitor, yjgF family - - - 0.0000000000000000000000000000000000000000000002513 172.0
DYD3_k127_2513825_0 Belongs to the ABC transporter superfamily K02032,K10823 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000377 426.0
DYD3_k127_2513825_1 ABC transporter, ATP-binding protein K15583 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003106 383.0
DYD3_k127_2513825_10 Preprotein translocase subunit SecG K03075 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000001246 76.0
DYD3_k127_2513825_11 Protein of unknown function (DUF2442) - - - 0.00000002371 60.0
DYD3_k127_2513825_2 ABC transporter (Permease) K02033,K15581 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004624 295.0
DYD3_k127_2513825_3 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004185 308.0
DYD3_k127_2513825_4 Bacterial extracellular solute-binding proteins, family 5 Middle - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001805 297.0
DYD3_k127_2513825_5 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001462 252.0
DYD3_k127_2513825_6 pathway, signal sequence K02035,K15580 - - 0.0000000000000000000000000000000000000000000000001185 197.0
DYD3_k127_2513825_7 PFAM extracellular solute-binding protein, family 5 K02035 - - 0.00000000000000000000000000000000000005396 164.0
DYD3_k127_2513825_8 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000000009144 150.0
DYD3_k127_2513825_9 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.000000000000000000000000002386 118.0
DYD3_k127_2564026_0 PFAM CoA-transferase family III K07749 - 2.8.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 563.0
DYD3_k127_2564026_1 Amidohydrolase family K01464,K01465,K01466 - 3.5.2.2,3.5.2.3,3.5.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003835 522.0
DYD3_k127_2564026_2 protein involved in propionate catabolism - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 504.0
DYD3_k127_2564026_3 Putative cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 359.0
DYD3_k127_2564026_4 Domain of unknown function (DUF4437) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 324.0
DYD3_k127_2576079_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 1.879e-257 819.0
DYD3_k127_2576079_1 DEAD DEAH box helicase K06877 - - 1.607e-211 680.0
DYD3_k127_2576079_10 Uncharacterised protein family UPF0047 - - - 0.000000000000000000000000000000000000000000000000000000003085 201.0
DYD3_k127_2576079_11 PFAM metal-dependent phosphohydrolase, HD sub domain K06951 - - 0.0000000000000000000000000000000000009883 147.0
DYD3_k127_2576079_12 Cell envelope-related transcriptional attenuator domain - - - 0.0000000000000000000000000005804 128.0
DYD3_k127_2576079_13 Nucleic acid binding, OB-fold, tRNA - - - 0.000000000000000001024 91.0
DYD3_k127_2576079_14 40-residue YVTN family beta-propeller repeat - - - 0.0000000000000006976 91.0
DYD3_k127_2576079_15 peptidase inhibitor activity - - - 0.000000000000001098 89.0
DYD3_k127_2576079_16 TIGRFAM 40-residue YVTN family beta-propeller repeat protein - - - 0.000000001483 69.0
DYD3_k127_2576079_2 Amino acid permease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003789 509.0
DYD3_k127_2576079_3 amino acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002804 514.0
DYD3_k127_2576079_4 Sodium/calcium exchanger protein K07301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005085 337.0
DYD3_k127_2576079_5 TrkA-C domain K03499 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000007903 246.0
DYD3_k127_2576079_6 Two component transcriptional regulator, winged helix family K07667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004971 255.0
DYD3_k127_2576079_7 Osmosensitive K+ channel His kinase sensor domain K07646 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000001486 237.0
DYD3_k127_2576079_8 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.000000000000000000000000000000000000000000000000000000000001099 218.0
DYD3_k127_2576079_9 PFAM TrkA-N domain protein K03499 - - 0.000000000000000000000000000000000000000000000000000000002891 207.0
DYD3_k127_2584792_0 Enoyl-CoA hydratase/isomerase K01661 - 4.1.3.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002308 434.0
DYD3_k127_2584792_1 Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) K02551 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944 2.2.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002193 368.0
DYD3_k127_2584792_2 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K01911,K02549 GO:0003674,GO:0003824,GO:0008150,GO:0008756,GO:0016405,GO:0016874,GO:0016877,GO:0016878,GO:0040007 4.2.1.113,6.2.1.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004647 287.0
DYD3_k127_2584792_3 Belongs to the MenA family. Type 1 subfamily K02548 GO:0003674,GO:0003824,GO:0004659,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0006766,GO:0006775,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009233,GO:0009234,GO:0009987,GO:0016740,GO:0016765,GO:0032194,GO:0042180,GO:0042181,GO:0042362,GO:0042371,GO:0042373,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 2.5.1.74 0.00000000000000000000000000000000000000000000000000000000000000001095 237.0
DYD3_k127_2584792_4 Putative esterase - - - 0.0000000000000000000000000000000000000001158 173.0
DYD3_k127_2586180_0 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 3.141e-271 861.0
DYD3_k127_2586180_1 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001963 537.0
DYD3_k127_2586180_10 Drug metabolite transporter (DMT) superfamily - - - 0.0000000000000000000000005664 115.0
DYD3_k127_2586180_11 Binds together with S18 to 16S ribosomal RNA K02990 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0015935,GO:0016020,GO:0019843,GO:0022626,GO:0022627,GO:0030312,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0071944,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000005694 106.0
DYD3_k127_2586180_12 - - - - 0.0000000000000000002224 93.0
DYD3_k127_2586180_13 Bacterial antitoxin of type II TA system, VapB - - - 0.0000000001662 70.0
DYD3_k127_2586180_14 PFAM blue (type 1) copper domain protein K00368 - 1.7.2.1 0.000000004435 63.0
DYD3_k127_2586180_15 Cupredoxin-like domain - - - 0.00002796 54.0
DYD3_k127_2586180_2 dUTP biosynthetic process K01494 - 3.5.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006852 444.0
DYD3_k127_2586180_3 PFAM NUDIX hydrolase - - - 0.0000000000000000000000000000000000000000000000000000001943 200.0
DYD3_k127_2586180_4 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000005974 200.0
DYD3_k127_2586180_5 Single-stranded DNA-binding protein K03111 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0016020,GO:0033554,GO:0042221,GO:0044464,GO:0046677,GO:0050896,GO:0051716,GO:0071944,GO:0097159,GO:1901363 - 0.00000000000000000000000000000000000000000000000003128 186.0
DYD3_k127_2586180_6 binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000008428 176.0
DYD3_k127_2586180_7 Mycothiol maleylpyruvate isomerase N-terminal domain - - - 0.00000000000000000000000000000007192 132.0
DYD3_k127_2586180_8 Toxic component of a toxin-antitoxin (TA) module. An RNase - GO:0003674,GO:0003824,GO:0004518,GO:0004540,GO:0006139,GO:0006417,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0016070,GO:0016787,GO:0016788,GO:0017148,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0034248,GO:0034249,GO:0034641,GO:0040008,GO:0043170,GO:0043207,GO:0044237,GO:0044238,GO:0044403,GO:0044419,GO:0045926,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051701,GO:0051704,GO:0051707,GO:0060255,GO:0065007,GO:0071704,GO:0075136,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0140098,GO:1901360,GO:2000112,GO:2000113 - 0.000000000000000000000000000001337 127.0
DYD3_k127_2586180_9 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000001147 114.0
DYD3_k127_2658382_0 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003552 301.0
DYD3_k127_2658382_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086,K03087 GO:0000988,GO:0000990,GO:0001666,GO:0002791,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006355,GO:0006950,GO:0008150,GO:0009266,GO:0009408,GO:0009410,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010565,GO:0010604,GO:0010628,GO:0016020,GO:0016987,GO:0019216,GO:0019217,GO:0019219,GO:0019222,GO:0019899,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032879,GO:0032880,GO:0036293,GO:0040007,GO:0042221,GO:0043175,GO:0043254,GO:0044087,GO:0044424,GO:0044444,GO:0044464,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050708,GO:0050789,GO:0050794,GO:0050896,GO:0051046,GO:0051049,GO:0051128,GO:0051171,GO:0051173,GO:0051223,GO:0051252,GO:0051254,GO:0060255,GO:0062012,GO:0065007,GO:0070063,GO:0070201,GO:0070482,GO:0071944,GO:0080090,GO:0090087,GO:0140110,GO:1902680,GO:1903506,GO:1903508,GO:1903530,GO:2000112,GO:2000142,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002948 288.0
DYD3_k127_2658382_10 trisaccharide binding - - - 0.00000000000000000000000000003886 130.0
DYD3_k127_2658382_11 Family of unknown function (DUF5319) - - - 0.000000000000000000000000002386 118.0
DYD3_k127_2658382_12 sortase family K07284 - 3.4.22.70 0.0000000000000000000000004269 117.0
DYD3_k127_2658382_13 gamma-glutamylcyclotransferase activity - - - 0.000000000000000000000004121 107.0
DYD3_k127_2658382_14 HNH endonuclease K07451 - - 0.000000000000000000000005325 115.0
DYD3_k127_2658382_15 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000007257 111.0
DYD3_k127_2658382_16 - - - - 0.0000000000000000000002147 108.0
DYD3_k127_2658382_17 Alpha/beta hydrolase family - - - 0.000000000000000001706 97.0
DYD3_k127_2658382_18 PFAM Fibronectin type III domain - - - 0.000000000205 73.0
DYD3_k127_2658382_19 Tissue inhibitor of metalloproteinase - - - 0.0000000002552 70.0
DYD3_k127_2658382_2 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004991 278.0
DYD3_k127_2658382_20 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000001942 66.0
DYD3_k127_2658382_21 FHA domain protein - GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944,GO:0097159,GO:1901363 - 0.000008779 54.0
DYD3_k127_2658382_22 Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress K16509 - - 0.00001324 51.0
DYD3_k127_2658382_3 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001757 280.0
DYD3_k127_2658382_4 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000004333 241.0
DYD3_k127_2658382_5 GlcNAc-PI de-N-acetylase - - - 0.0000000000000000000000000000000000000000000000000000000003211 210.0
DYD3_k127_2658382_6 F420-dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000752 209.0
DYD3_k127_2658382_7 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000001492 195.0
DYD3_k127_2658382_8 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000002532 191.0
DYD3_k127_2658382_9 protein involved in propionate catabolism - - - 0.000000000000000000000000000000001509 145.0
DYD3_k127_26675_0 Peptidase s1 and s6 chymotrypsin hap K08372 - - 0.000000000000000000000000000000000000000000000000000000000003811 235.0
DYD3_k127_26675_1 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.0000001242 59.0
DYD3_k127_26675_2 - - - - 0.000009606 57.0
DYD3_k127_26675_3 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes K20276 - - 0.0004983 49.0
DYD3_k127_2756268_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005149 351.0
DYD3_k127_2756268_1 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000001645 160.0
DYD3_k127_2756268_2 D-Ala-D-Ala carboxypeptidase 3 (S13) family K07259 - 3.4.16.4 0.00000000000000000000000000000000000001291 168.0
DYD3_k127_2756268_3 Secreted trypsin-like serine protease - - - 0.00000000000000000000000000000001028 137.0
DYD3_k127_2756268_4 PhoQ Sensor - - - 0.00000000000000000000000000000002021 146.0
DYD3_k127_2756268_5 LGFP repeat - - - 0.000000000000000000000000000001148 135.0
DYD3_k127_2756268_6 - - - - 0.000000000000000005203 89.0
DYD3_k127_2756268_8 Belongs to the peptidase S8 family - - - 0.0002709 52.0
DYD3_k127_2761622_0 PFAM FAD linked oxidase domain protein - - - 3.223e-216 679.0
DYD3_k127_2761622_1 PFAM polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004909 462.0
DYD3_k127_2761622_10 Belongs to the UPF0312 family - - - 0.00000000000000000000000000000000000000000000000000002273 194.0
DYD3_k127_2761622_11 Protein of unknown function (DUF4012) - - - 0.00000000000000000000000000000000000000000000000385 194.0
DYD3_k127_2761622_12 - - - - 0.000000000000000000000000000000000000000000002433 175.0
DYD3_k127_2761622_13 IclR helix-turn-helix domain - - - 0.00000000000000000000000005517 116.0
DYD3_k127_2761622_14 Cold shock protein K03704 - - 0.0000000000000000000009284 109.0
DYD3_k127_2761622_15 amine dehydrogenase activity - - - 0.0000000001508 68.0
DYD3_k127_2761622_16 TIGRFAM cell envelope-related function transcriptional attenuator - - - 0.0000194 56.0
DYD3_k127_2761622_2 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 434.0
DYD3_k127_2761622_3 6-phosphogluconate dehydrogenase, C-terminal domain K00033 - 1.1.1.343,1.1.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006527 359.0
DYD3_k127_2761622_4 PFAM NAD-dependent epimerase dehydratase K01784,K02473 - 5.1.3.2,5.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002651 321.0
DYD3_k127_2761622_5 PFAM lipopolysaccharide biosynthesis protein K08252,K08253 - 2.7.10.1,2.7.10.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000004254 282.0
DYD3_k127_2761622_6 Chain length determinant protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001792 263.0
DYD3_k127_2761622_7 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000005957 242.0
DYD3_k127_2761622_8 HNH endonuclease - - - 0.000000000000000000000000000000000000000000000000000000000000003427 236.0
DYD3_k127_2761622_9 Transcriptional regulator, LuxR family - - - 0.0000000000000000000000000000000000000000000000000000003215 203.0
DYD3_k127_2763200_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016020,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:0071944,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 2.23e-234 739.0
DYD3_k127_2763200_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003987 492.0
DYD3_k127_2763200_10 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000006018 200.0
DYD3_k127_2763200_11 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.000000000000000000000000000000000000000004287 158.0
DYD3_k127_2763200_12 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.000000000000000000000000000000002394 140.0
DYD3_k127_2763200_13 amidohydrolase - - - 0.00000000000000000000000000000001307 136.0
DYD3_k127_2763200_14 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0030312,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0040007,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:1901360 5.4.99.12 0.00000000000000000000000000000002401 131.0
DYD3_k127_2763200_15 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.000000000000000000000000000009824 125.0
DYD3_k127_2763200_16 PIN domain - - - 0.0000000000000000000000008546 109.0
DYD3_k127_2763200_17 - - - - 0.0000000000000000007128 94.0
DYD3_k127_2763200_18 acetyltransferases and hydrolases with the alpha beta hydrolase fold K01046 - 3.1.1.3 0.000000000000001779 90.0
DYD3_k127_2763200_19 methyltransferase - - - 0.00000000001889 77.0
DYD3_k127_2763200_2 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 GO:0008150,GO:0040007 5.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003823 412.0
DYD3_k127_2763200_20 Reprolysin (M12B) family zinc metalloprotease - - - 0.000000003173 70.0
DYD3_k127_2763200_21 Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I K02638 - - 0.000004726 55.0
DYD3_k127_2763200_3 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000748 376.0
DYD3_k127_2763200_4 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006102 328.0
DYD3_k127_2763200_5 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000145 303.0
DYD3_k127_2763200_6 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine - - - 0.0000000000000000000000000000000000000000000000000000000000000005831 242.0
DYD3_k127_2763200_7 tRNA threonylcarbamoyladenosine modification K01409,K14742 GO:0002949,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140096,GO:1901360,GO:1901564 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000005919 223.0
DYD3_k127_2763200_8 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000001973 210.0
DYD3_k127_2763200_9 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000004499 213.0
DYD3_k127_2772593_0 ANTAR K22010 GO:0000160,GO:0003674,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0007154,GO:0007165,GO:0008150,GO:0009987,GO:0016020,GO:0023052,GO:0030312,GO:0035556,GO:0040007,GO:0043167,GO:0043168,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000004097 225.0
DYD3_k127_2772593_1 PFAM Extracellular ligand-binding receptor K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000005134 235.0
DYD3_k127_2772593_2 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000005883 78.0
DYD3_k127_2772593_3 - - - - 0.0003437 49.0
DYD3_k127_2798737_0 Class II vitamin B12-dependent ribonucleotide reductase K00525 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 1.17.4.1 0.0 1225.0
DYD3_k127_2798737_1 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23 0.000000000000000000000000000000000000000000003788 172.0
DYD3_k127_2798737_2 - - - - 0.000019 51.0
DYD3_k127_2832030_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 7.719e-258 809.0
DYD3_k127_2832030_1 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002467 573.0
DYD3_k127_2832030_10 cellular response to dsDNA K07178 - 2.7.11.1 0.000000000000000000000000000000000000000000000000008059 190.0
DYD3_k127_2832030_11 Protein of unknown function (DUF3090) - - - 0.000000000000000000000000000000000005622 149.0
DYD3_k127_2832030_12 Pyridoxamine 5'-phosphate oxidase - - - 0.0000000000000000000000000000000001215 138.0
DYD3_k127_2832030_13 Toxic component of a toxin-antitoxin (TA) module. An RNase K19686 - - 0.00000000000000000000000000000002472 133.0
DYD3_k127_2832030_14 Rv0623-like transcription factor K19687 - - 0.00000000000000000003989 93.0
DYD3_k127_2832030_15 Sigma-70 region 2 K03088 - - 0.000000000000002508 85.0
DYD3_k127_2832030_16 glycosyl hydrolase, BNR repeat-containing protein - - - 0.00000000000000446 88.0
DYD3_k127_2832030_17 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.00001003 50.0
DYD3_k127_2832030_2 Malic enzyme, NAD binding domain K00027 - 1.1.1.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002193 544.0
DYD3_k127_2832030_3 aminotransferase K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008871 416.0
DYD3_k127_2832030_4 F420-dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006114 371.0
DYD3_k127_2832030_5 PFAM Glucose Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001357 353.0
DYD3_k127_2832030_6 PFAM FIST C domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002025 332.0
DYD3_k127_2832030_7 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007013 249.0
DYD3_k127_2832030_8 phosphatidylinositol kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000006848 244.0
DYD3_k127_2832030_9 alpha-ribazole phosphatase activity K02226,K15634,K22305 - 3.1.3.3,3.1.3.73,5.4.2.12 0.000000000000000000000000000000000000000000000000000001487 203.0
DYD3_k127_2832550_0 ATPases associated with a variety of cellular activities K09812 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0008144,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0030145,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0044464,GO:0046872,GO:0046914,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004887 336.0
DYD3_k127_2832550_1 PFAM Transketolase, C-terminal domain K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004871 284.0
DYD3_k127_2832550_2 1-deoxy-D-xylulose-5-phosphate synthase K00615 - 2.2.1.1 0.0000000000000000000000000000000000000000000000000000005832 196.0
DYD3_k127_2832550_3 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000002978 190.0
DYD3_k127_2832550_4 PFAM Peptidase M23 K21471 - - 0.000000000000000000000000000000000000000000000000365 194.0
DYD3_k127_2832550_5 Part of the ABC transporter FtsEX involved in cellular division K09811 GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0009987,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0040007,GO:0044425,GO:0044459,GO:0044464,GO:0051301,GO:0071944 - 0.0000000000000000000000000000000000000000000000412 181.0
DYD3_k127_2832550_6 - - - - 0.000000000000000000000000008776 117.0
DYD3_k127_2835572_0 lysine 2,3-aminomutase K01843 - 5.4.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007176 584.0
DYD3_k127_2835572_1 ABC transporter transmembrane region K06147 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 556.0
DYD3_k127_2835572_2 helix_turn_helix isocitrate lyase regulation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008136 276.0
DYD3_k127_2835572_3 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000001285 228.0
DYD3_k127_2835572_4 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000002435 209.0
DYD3_k127_2835572_5 metal cluster binding K06940,K18475 - - 0.0000000000000000000000000000000000000001286 162.0
DYD3_k127_2835572_6 Heme oxygenase K21480 - 1.14.15.20 0.0000000000000000000000000000000000000007582 158.0
DYD3_k127_2835572_7 ATP-grasp domain - - - 0.000000000000000000000000000000000001771 143.0
DYD3_k127_2863007_0 Oxidoreductase molybdopterin binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004883 424.0
DYD3_k127_2863007_1 protein conserved in bacteria K09931 - - 0.00000000000000000000000000000000000000005638 157.0
DYD3_k127_2871456_0 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003872 445.0
DYD3_k127_2871456_1 Thiamine pyrophosphate enzyme, central domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002667 415.0
DYD3_k127_2871456_10 PFAM Cys Met metabolism K01739 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003962,GO:0004123,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006534,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009070,GO:0009086,GO:0009092,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0017144,GO:0019279,GO:0019343,GO:0019344,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071265,GO:0071266,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.48 0.0000000000000000000000000000000000000000000000398 171.0
DYD3_k127_2871456_11 Psort location CytoplasmicMembrane, score - - - 0.0000000000000000000000000000000000000000004056 173.0
DYD3_k127_2871456_12 EamA-like transporter family - - - 0.000000000000000000000000000000000005864 155.0
DYD3_k127_2871456_13 Sulfur transfer protein involved in thiamine biosynthesis K03154 - - 0.00000000003045 69.0
DYD3_k127_2871456_14 - - - - 0.00000004847 63.0
DYD3_k127_2871456_2 CoA-transferase family III K07749 - 2.8.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003642 403.0
DYD3_k127_2871456_3 serine threonine protein kinase K08884,K12132 GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018107,GO:0018193,GO:0018210,GO:0019216,GO:0019217,GO:0019222,GO:0019538,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0036211,GO:0042304,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046777,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:0140096,GO:1901564 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000805 368.0
DYD3_k127_2871456_4 Biotin and Thiamin Synthesis associated domain K03150 - 4.1.99.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 362.0
DYD3_k127_2871456_5 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.8.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007792 340.0
DYD3_k127_2871456_6 Threonine aldolase K01620 - 4.1.2.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 337.0
DYD3_k127_2871456_7 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07669,K07672 GO:0000160,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006355,GO:0007154,GO:0007165,GO:0008150,GO:0009268,GO:0009628,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010446,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016020,GO:0019219,GO:0019222,GO:0023052,GO:0030312,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0035556,GO:0043254,GO:0044087,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051716,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0090034,GO:0097159,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009107 265.0
DYD3_k127_2871456_8 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007121 265.0
DYD3_k127_2871456_9 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.0000000000000000000000000000000000000000000000000000000001916 215.0
DYD3_k127_2897815_0 Putative modulator of DNA gyrase K03568 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 429.0
DYD3_k127_2897815_1 PFAM peptidase U62 modulator of DNA gyrase K03592 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002298 358.0
DYD3_k127_2897815_2 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002962 287.0
DYD3_k127_2897815_3 PAS domain - - - 0.0000000000000000000000000008825 117.0
DYD3_k127_2897815_4 arylsulfatase activity - - - 0.00000000000000005823 95.0
DYD3_k127_2897815_5 TIGRFAM Diguanylate cyclase - - - 0.0000001812 54.0
DYD3_k127_2941193_0 - - - - 0.00000000000000000000003389 106.0
DYD3_k127_2941193_1 Subtilase family K14743 - - 0.00000006852 66.0
DYD3_k127_2946814_0 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002136 286.0
DYD3_k127_2946814_1 Transmembrane secretion effector - - - 0.000002983 57.0
DYD3_k127_2946814_2 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0034641,GO:0034645,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901576 2.7.7.7 0.0006313 48.0
DYD3_k127_2969495_0 Male sterility protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000019 415.0
DYD3_k127_2969495_1 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000645 293.0
DYD3_k127_2969495_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001813 263.0
DYD3_k127_2969495_3 ABC transporter K02003,K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000002329 238.0
DYD3_k127_2969495_4 FtsX-like permease family K02004 - - 0.00000000000000000000000000000000000000000000000000000000004173 230.0
DYD3_k127_2969495_5 Uncharacterized protein conserved in bacteria (DUF2064) - - - 0.0000000000003204 78.0
DYD3_k127_2969495_6 Acetyltransferase (GNAT) family - - - 0.0004057 51.0
DYD3_k127_298815_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 2.09e-295 926.0
DYD3_k127_298815_1 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 1.658e-294 930.0
DYD3_k127_298815_10 HD domain - - - 0.00000000000000000000000000000000000000000000000000004113 207.0
DYD3_k127_298815_11 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0000166,GO:0001882,GO:0001884,GO:0002135,GO:0003674,GO:0003824,GO:0004140,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0018130,GO:0019103,GO:0019438,GO:0019637,GO:0019693,GO:0030554,GO:0032549,GO:0032551,GO:0032552,GO:0032553,GO:0032554,GO:0032557,GO:0032558,GO:0032564,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.00000000000000000000000000000000000000000000000005075 187.0
DYD3_k127_298815_12 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000003153 183.0
DYD3_k127_298815_13 amino acid ABC transporter K02029 - - 0.000000000000000000000000000000000001347 153.0
DYD3_k127_298815_14 Involved in manganese homeostasis. Might activate the transcription of the mntABCD operon K03709 - - 0.00000000000000000000000000000000214 145.0
DYD3_k127_298815_15 Methyltransferase domain - - - 0.000000000000000000000000000001238 141.0
DYD3_k127_298815_16 hydrolase K07025 - - 0.00000000000000000000000000001526 130.0
DYD3_k127_298815_17 Uncharacterized conserved protein (DUF2203) - - - 0.00000000000000000000008403 104.0
DYD3_k127_298815_18 cheY-homologous receiver domain - - - 0.000000000000000000007252 97.0
DYD3_k127_298815_19 Domain of unknown function (DUF222) - - - 0.00000000000000000005382 103.0
DYD3_k127_298815_2 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 GO:0003674,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0030312,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0071944,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901362,GO:1901576 2.7.7.7 2.823e-243 790.0
DYD3_k127_298815_20 Acetyltransferase (GNAT) domain - - - 0.000001544 58.0
DYD3_k127_298815_21 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.00006877 53.0
DYD3_k127_298815_3 Belongs to the AAA ATPase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004226 590.0
DYD3_k127_298815_4 Ribosomal protein S1 K02945 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005643 550.0
DYD3_k127_298815_5 PFAM Glycosyl transferase, family 2 K11936 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003561 353.0
DYD3_k127_298815_6 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791 - 5.1.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000504 327.0
DYD3_k127_298815_7 ATPases associated with a variety of cellular activities K02028,K17076 - 3.6.3.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005263 311.0
DYD3_k127_298815_8 PFAM Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 303.0
DYD3_k127_298815_9 Histidine kinase K13924 - 2.1.1.80,3.1.1.61 0.00000000000000000000000000000000000000000000000000000008025 220.0
DYD3_k127_3081801_0 succinate dehydrogenase K00239,K00278 GO:0000104,GO:0000166,GO:0001539,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006091,GO:0006113,GO:0006928,GO:0006950,GO:0006974,GO:0006996,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016043,GO:0016491,GO:0016627,GO:0022607,GO:0022900,GO:0030030,GO:0030031,GO:0032991,GO:0033554,GO:0036094,GO:0040011,GO:0043167,GO:0043168,GO:0044085,GO:0044237,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0044780,GO:0044781,GO:0045273,GO:0045274,GO:0045283,GO:0045284,GO:0045333,GO:0048037,GO:0048870,GO:0050660,GO:0050662,GO:0050896,GO:0051179,GO:0051674,GO:0051716,GO:0055114,GO:0070469,GO:0070470,GO:0070925,GO:0071840,GO:0071944,GO:0071949,GO:0071973,GO:0097159,GO:0097588,GO:0098796,GO:0098797,GO:0098803,GO:1901265,GO:1901363 1.3.5.1,1.3.5.4,1.4.3.16 1.592e-263 822.0
DYD3_k127_3081801_1 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K01848 - 5.4.99.2 1.469e-219 692.0
DYD3_k127_3081801_10 succinate dehydrogenase K00241 - - 0.0000000000000000000000000000004738 131.0
DYD3_k127_3081801_11 - - - - 0.0000000000000000000000001217 116.0
DYD3_k127_3081801_12 Cysteine-rich secretory protein family - - - 0.00000000000005617 77.0
DYD3_k127_3081801_2 Biotin-lipoyl like K11263 - 6.3.4.14,6.4.1.2,6.4.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 512.0
DYD3_k127_3081801_3 Catalyzes the reduction of nonspecific electron acceptors such as 2,6-dimethyl-1,4-benzoquinone and 5-hydroxy-1,4-naphthaquinone K00382 GO:0000166,GO:0003674,GO:0003824,GO:0003955,GO:0005488,GO:0008150,GO:0008152,GO:0009405,GO:0016491,GO:0016651,GO:0016655,GO:0036094,GO:0043167,GO:0043168,GO:0044419,GO:0048037,GO:0050660,GO:0050661,GO:0050662,GO:0051704,GO:0055114,GO:0070401,GO:0097159,GO:1901265,GO:1901363 1.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004845 503.0
DYD3_k127_3081801_4 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002668 353.0
DYD3_k127_3081801_5 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.000000000000000000000000000000000000000000000000000000000000000000000313 267.0
DYD3_k127_3081801_6 Iron-containing redox enzyme K06137 - 1.3.3.11 0.00000000000000000000000000000000000000000000000000000000009215 213.0
DYD3_k127_3081801_7 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000000000000000000000000000000002422 215.0
DYD3_k127_3081801_8 LemA family K03744 - - 0.000000000000000000000000000000000000000000000000000004117 195.0
DYD3_k127_3081801_9 Succinate dehydrogenase hydrophobic K00242 - - 0.0000000000000000000000000000000001132 141.0
DYD3_k127_3156198_0 O-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005067 414.0
DYD3_k127_3156198_1 aldo keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000003283 246.0
DYD3_k127_3192231_0 ubiE/COQ5 methyltransferase family K15942 - 2.1.1.288 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 295.0
DYD3_k127_3192231_1 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000002776 256.0
DYD3_k127_3192231_2 alpha/beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000002943 219.0
DYD3_k127_3203159_0 reductase K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000008185 225.0
DYD3_k127_3203159_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.000000000000000000000000000000000000000000000002772 185.0
DYD3_k127_3203159_2 Belongs to the UPF0336 family - - - 0.0000000000000000000000000000000000000000000002161 173.0
DYD3_k127_3203159_3 MaoC like domain - - - 0.000000000000000000000000000000000000000001238 164.0
DYD3_k127_3203159_4 PFAM pentapeptide repeat protein - - - 0.00000000000005424 86.0
DYD3_k127_327727_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000528 430.0
DYD3_k127_327727_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006896 412.0
DYD3_k127_327727_10 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 315.0
DYD3_k127_327727_11 haloacid dehalogenase-like hydrolase - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003745 280.0
DYD3_k127_327727_12 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000017 276.0
DYD3_k127_327727_13 Pfam Adenylate and Guanylate cyclase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000039 276.0
DYD3_k127_327727_14 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004112 258.0
DYD3_k127_327727_15 PFAM blue (type 1) copper domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005414 271.0
DYD3_k127_327727_16 ABC-2 type transporter K09694 - - 0.000000000000000000000000000000000000000000000000000000000000000000002372 246.0
DYD3_k127_327727_17 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000007549 247.0
DYD3_k127_327727_18 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000008325 198.0
DYD3_k127_327727_19 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000003007 167.0
DYD3_k127_327727_2 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 403.0
DYD3_k127_327727_20 serine-type peptidase activity - - - 0.00000000000000000000000000000000000000000003594 176.0
DYD3_k127_327727_21 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.000000000000000000000000000000000000000002231 168.0
DYD3_k127_327727_22 glyoxalase III activity - - - 0.0000000000000000000000000000000000000009908 152.0
DYD3_k127_327727_23 PQQ enzyme repeat K05889,K12132 - 1.1.2.6,2.7.11.1 0.00000000000000000000000000000000000002465 163.0
DYD3_k127_327727_24 PFAM blue (type 1) copper domain protein - - - 0.0000000000000000000000000000000321 144.0
DYD3_k127_327727_25 Evidence 2b Function of strongly homologous gene - - - 0.000000000000000000000000000003263 129.0
DYD3_k127_327727_26 SnoaL-like domain - - - 0.00000000000000000000000000001179 122.0
DYD3_k127_327727_27 TfoX N-terminal domain - - - 0.0000000000000000000000000000904 119.0
DYD3_k127_327727_28 TIGRFAM polymorphic outer membrane protein - - - 0.00000000000000000000000005578 125.0
DYD3_k127_327727_29 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000001319 98.0
DYD3_k127_327727_3 Type II/IV secretion system protein K02283 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002666 377.0
DYD3_k127_327727_30 Type II secretion system protein F domain-containing protein 1 K12510 - - 0.0000000000000000004424 102.0
DYD3_k127_327727_31 PFAM ErfK YbiS YcfS YnhG family protein - - - 0.000000000000000001972 93.0
DYD3_k127_327727_32 Type ii secretion system K12511 - - 0.0000000000000008575 88.0
DYD3_k127_327727_34 Protein of unknown function (DUF1778) - - - 0.00000000000002433 76.0
DYD3_k127_327727_35 - - - - 0.000000000003889 80.0
DYD3_k127_327727_36 PQQ-like domain - - - 0.000000000004683 79.0
DYD3_k127_327727_37 Antibiotic biosynthesis monooxygenase - - - 0.000001989 50.0
DYD3_k127_327727_38 bacterial-type flagellum organization - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0040007,GO:0044424,GO:0044444,GO:0044464 - 0.0007664 51.0
DYD3_k127_327727_4 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001661 365.0
DYD3_k127_327727_5 transport, permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002835 333.0
DYD3_k127_327727_6 Zinc-binding dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004594 339.0
DYD3_k127_327727_7 a CheY-like receiver domain and an HD-GYP domain K07814 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004848 338.0
DYD3_k127_327727_8 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007163 351.0
DYD3_k127_327727_9 AAA domain, putative AbiEii toxin, Type IV TA system K09695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000606 339.0
DYD3_k127_3282093_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951,K01139 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0008728,GO:0008893,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009150,GO:0009152,GO:0009163,GO:0009165,GO:0009259,GO:0009260,GO:0009267,GO:0009405,GO:0009605,GO:0009987,GO:0009991,GO:0015968,GO:0015969,GO:0015970,GO:0016020,GO:0016740,GO:0016772,GO:0016778,GO:0016787,GO:0016788,GO:0016794,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030145,GO:0030312,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034035,GO:0034036,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0042578,GO:0042594,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044419,GO:0044464,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0046872,GO:0046914,GO:0050896,GO:0051704,GO:0051716,GO:0055086,GO:0071496,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.7.6.5,3.1.7.2 8.185e-269 847.0
DYD3_k127_3282093_1 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 2.2e-220 712.0
DYD3_k127_3282093_10 Bacterial protein of unknown function (DUF948) - - - 0.00000000000000001014 89.0
DYD3_k127_3282093_2 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 7.095e-198 643.0
DYD3_k127_3282093_3 ATPase family associated with various cellular activities (AAA) K07478 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001798 457.0
DYD3_k127_3282093_4 tRNA synthetase class II core domain (G, H, P, S and T) K01892 - 6.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002591 395.0
DYD3_k127_3282093_5 Metallo-beta-lactamase superfamily K01069 - 3.1.2.6 0.0000000000000000000000000000000000000000000000000000000000005776 218.0
DYD3_k127_3282093_6 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.00000000000000000000000000000000000000000000000000000001521 217.0
DYD3_k127_3282093_7 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.0000000000000000000000000000000000000000000000000000003339 212.0
DYD3_k127_3282093_8 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.00000000000000000000000000000000000000000000006505 172.0
DYD3_k127_3282093_9 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.00000000000000000000000000002692 121.0
DYD3_k127_329044_0 PEP-utilising enzyme, TIM barrel domain K01006 - 2.7.9.1 0.0 1126.0
DYD3_k127_329044_1 Catalyzes the attachment of glycine to tRNA(Gly) K01880 GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006426,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046983,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.14 2.498e-195 623.0
DYD3_k127_329044_10 Acetyltransferase (GNAT) domain K03817 - - 0.0000000000000000004807 102.0
DYD3_k127_329044_11 ABC-type transport system involved in multi-copper enzyme maturation permease component - - - 0.000000000000000005322 99.0
DYD3_k127_329044_2 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003862 370.0
DYD3_k127_329044_3 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006 314.0
DYD3_k127_329044_4 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806,K12503 GO:0000287,GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016020,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0030145,GO:0033850,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0046872,GO:0046914,GO:0071704,GO:0071944,GO:1901576,GO:1901615,GO:1901617 2.5.1.31,2.5.1.68 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002045 304.0
DYD3_k127_329044_5 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806,K14215,K21273 GO:0000287,GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008834,GO:0009058,GO:0009987,GO:0016020,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0030145,GO:0033850,GO:0040007,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0046872,GO:0046914,GO:0050347,GO:0071704,GO:0071944,GO:1901576,GO:1901615,GO:1901617 2.5.1.31,2.5.1.86,2.5.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002589 291.0
DYD3_k127_329044_6 Involved in DNA repair and RecF pathway recombination K03584 GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000002497 244.0
DYD3_k127_329044_7 Acetyltransferase (GNAT) domain K03790 - 2.3.1.128 0.00000000000000000000000000000000000000000014 181.0
DYD3_k127_329044_8 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.00000000000000000000000001227 124.0
DYD3_k127_329044_9 Pyridoxamine 5'-phosphate oxidase - - - 0.00000000000000000000001827 104.0
DYD3_k127_3298955_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944 6.1.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000006178 259.0
DYD3_k127_3298955_1 Glycosyl transferase family 2 K11936,K14666 - - 0.000000000000000000000000000000000000000000000000006932 203.0
DYD3_k127_330727_0 FAD linked oxidases, C-terminal domain K00104 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 1.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003335 587.0
DYD3_k127_330727_1 alpha beta - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002031 552.0
DYD3_k127_330727_10 HNH endonuclease - - - 0.0000000000000000000009787 108.0
DYD3_k127_330727_2 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004035 471.0
DYD3_k127_330727_3 Type III restriction enzyme, res subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003474 404.0
DYD3_k127_330727_4 - K07403 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007881 400.0
DYD3_k127_330727_5 PFAM Penicillin binding protein transpeptidase domain K05366,K21464 - 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 375.0
DYD3_k127_330727_6 PFAM Band 7 protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001499 359.0
DYD3_k127_330727_7 Dienelactone hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004017 340.0
DYD3_k127_330727_8 Phosphodiester glycosidase - - - 0.000000000000000000000000000000000001021 154.0
DYD3_k127_3325144_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000173 448.0
DYD3_k127_3325144_1 PFAM Glucose Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004587 376.0
DYD3_k127_3325144_2 Acetyltransferase (GNAT) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000006856 247.0
DYD3_k127_3325144_3 response regulator, receiver K07776 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009405,GO:0009889,GO:0010468,GO:0010556,GO:0010565,GO:0019216,GO:0019217,GO:0019219,GO:0019220,GO:0019222,GO:0031323,GO:0031326,GO:0044419,GO:0048583,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051252,GO:0051704,GO:0060255,GO:0062012,GO:0065007,GO:0080090,GO:0080134,GO:0097159,GO:1901363,GO:1902882,GO:1903506,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000000000004525 192.0
DYD3_k127_3325144_4 ErfK YbiS YcfS YnhG family protein - - - 0.0000000000000001958 87.0
DYD3_k127_3352194_0 PFAM Glycosyl transferase, group 1 K13668 GO:0000009,GO:0000030,GO:0003674,GO:0003824,GO:0004376,GO:0005575,GO:0005623,GO:0005886,GO:0006629,GO:0006643,GO:0006664,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009247,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0016758,GO:0033164,GO:0040007,GO:0043750,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044464,GO:0046467,GO:0070085,GO:0071704,GO:0071944,GO:0097502,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.4.1.346 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004667 358.0
DYD3_k127_3352194_1 PFAM peptidase M48 Ste24p K06013 - 3.4.24.84 0.000000000000000000000000000000000000000000000000000000000000000000005869 256.0
DYD3_k127_3352194_2 L-carnitine dehydratase bile acid-inducible protein F - - - 0.0000000000002908 72.0
DYD3_k127_3352194_3 Psort location Cytoplasmic, score - GO:0008150,GO:0040007 - 0.0000000000009755 80.0
DYD3_k127_3352194_4 - - - - 0.0000016 53.0
DYD3_k127_3354789_0 Leucyl-tRNA synthetase, Domain 2 K01869 - 6.1.1.4 6.296e-309 966.0
DYD3_k127_3354789_1 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 5.445e-263 822.0
DYD3_k127_3354789_10 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.0000000000000000000000000000000000000000000000000000000000000006998 231.0
DYD3_k127_3354789_11 NmrA-like family K00091 - 1.1.1.219 0.0000000000000000000000000000000000000000000000000000000000000326 226.0
DYD3_k127_3354789_12 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 GO:0005575,GO:0005623,GO:0005886,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0044464,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000006328 207.0
DYD3_k127_3354789_13 PFAM helix-turn-helix domain protein - - - 0.00000000000000000000000000000000000000009253 158.0
DYD3_k127_3354789_14 TIGRFAM competence protein ComEA helix-hairpin-helix K02237 - - 0.0000000000000000000000000000000000001095 154.0
DYD3_k127_3354789_15 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016436,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070042,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.193 0.0000000000000000000000000000000003433 143.0
DYD3_k127_3354789_16 PFAM Histidine triad (HIT) protein K02503 - - 0.000000000000000000000000000000009103 141.0
DYD3_k127_3354789_17 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000003458 134.0
DYD3_k127_3354789_18 Enoyl-CoA hydratase/isomerase K01692,K08299 - 4.2.1.149,4.2.1.17 0.0000000000000000000000000000389 136.0
DYD3_k127_3354789_19 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.0000000000000000000003419 102.0
DYD3_k127_3354789_2 Dipeptidyl aminopeptidase acylaminoacyl peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001872 614.0
DYD3_k127_3354789_20 DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.000000000000000000004277 108.0
DYD3_k127_3354789_21 Binds directly to 16S ribosomal RNA K02968 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0040007,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000309 91.0
DYD3_k127_3354789_22 Cupin domain - - - 0.0000000000005421 76.0
DYD3_k127_3354789_3 PhoH-like protein K06217 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004187 422.0
DYD3_k127_3354789_4 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004252 418.0
DYD3_k127_3354789_5 PFAM CBS domain K03699 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 388.0
DYD3_k127_3354789_6 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 GO:0005575,GO:0005618,GO:0005623,GO:0008150,GO:0030312,GO:0040007,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005607 347.0
DYD3_k127_3354789_7 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006275,GO:0008150,GO:0008156,GO:0009889,GO:0009890,GO:0009892,GO:0010556,GO:0010558,GO:0010605,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0019219,GO:0019222,GO:0030174,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032297,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0045934,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051302,GO:0051781,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0090329,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:2000104,GO:2000112,GO:2000113 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001679 318.0
DYD3_k127_3354789_8 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000422 303.0
DYD3_k127_3354789_9 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000848 310.0
DYD3_k127_3370629_0 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily K17828 - 1.3.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005024 299.0
DYD3_k127_3370629_1 Belongs to the CarB family K01955 GO:0000050,GO:0003674,GO:0003824,GO:0004087,GO:0004088,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016020,GO:0016053,GO:0016874,GO:0016879,GO:0016884,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 292.0
DYD3_k127_3370629_2 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B K02823 - - 0.000000000000000000000000000000000000000000000000000000004184 209.0
DYD3_k127_3371406_0 cellular manganese ion homeostasis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003079 365.0
DYD3_k127_3371406_1 Protein of unknown function (DUF1838) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007047 289.0
DYD3_k127_3371406_2 MASE1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000008304 252.0
DYD3_k127_3371406_3 Histidine kinase K07646 - 2.7.13.3 0.00000000000000000000000000001499 136.0
DYD3_k127_3371406_4 - - - - 0.0000000000000000000000000001161 116.0
DYD3_k127_3371406_5 Protein of unknown function (DUF1706) - - - 0.0000002981 59.0
DYD3_k127_342697_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 8.259e-216 686.0
DYD3_k127_342697_1 elongation factor Tu domain 2 protein K02355 - - 1.544e-211 679.0
DYD3_k127_342697_10 nuclease activity K06218 - - 0.0000000000000000009883 88.0
DYD3_k127_342697_11 aminopeptidase N - - - 0.00000000000000001583 96.0
DYD3_k127_342697_2 Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively K06215 - 4.3.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003884 434.0
DYD3_k127_342697_3 Peptidase family M48 K03799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009385 294.0
DYD3_k127_342697_4 PFAM Glycosyl transferase, group 1 K08256 GO:0000026,GO:0000030,GO:0000287,GO:0003674,GO:0003824,GO:0004376,GO:0004377,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006629,GO:0006643,GO:0006644,GO:0006650,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009247,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0016758,GO:0019637,GO:0043167,GO:0043169,GO:0043750,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044464,GO:0046467,GO:0046486,GO:0046488,GO:0046872,GO:0070085,GO:0071704,GO:0071944,GO:0097502,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.4.1.345 0.00000000000000000000000000000000000000000000000000000000000000000001224 255.0
DYD3_k127_342697_5 LemA family K03744 - - 0.000000000000000000000000000000000000000000000000000000000000000204 225.0
DYD3_k127_342697_6 PFAM histidine triad (HIT) protein K19710 - 2.7.7.53 0.0000000000000000000000000000000000000000000000000000002005 213.0
DYD3_k127_342697_7 Bacterial lipid A biosynthesis acyltransferase K22311 GO:0003674,GO:0003824,GO:0005575,GO:0006629,GO:0006643,GO:0006664,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009247,GO:0009987,GO:0016020,GO:0016740,GO:0016746,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.3.1.265 0.0000000000000000000000000000000000000000000000000001154 205.0
DYD3_k127_342697_8 Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS K08681 - 4.3.3.6 0.000000000000000000000000000000000000006685 148.0
DYD3_k127_342697_9 toxin-antitoxin pair type II binding K08591,K19159 GO:0003674,GO:0005488,GO:0005515,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0040008,GO:0045927,GO:0048518,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097351,GO:1903506,GO:2000112,GO:2001141 2.3.1.15 0.000000000000000000000000006233 117.0
DYD3_k127_348289_0 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005819 509.0
DYD3_k127_348289_1 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002531 366.0
DYD3_k127_348289_2 Endoribonuclease L-PSP - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002328 368.0
DYD3_k127_348289_3 YCII-related domain - - - 0.0000000000000000000000000000000000000197 146.0
DYD3_k127_348289_4 D-alanyl-D-alanine carboxypeptidase - - - 0.000000000000000000000000000000004633 143.0
DYD3_k127_348289_5 - - - - 0.00000000000000000000000000000004361 132.0
DYD3_k127_348289_6 metallopeptidase activity - - - 0.000000000000000000000000000009839 131.0
DYD3_k127_348289_7 MaoC like domain - - - 0.00000000000741 74.0
DYD3_k127_348289_8 Enoyl-CoA hydratase/isomerase K18570 - - 0.0001414 46.0
DYD3_k127_3548107_0 His Kinase A (phosphoacceptor) domain K07654 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000005776 220.0
DYD3_k127_3548107_1 - - - - 0.000000000000000000000000000000000000002582 158.0
DYD3_k127_3548107_2 PFAM Glycosyl transferase family 2 K13693 - 2.4.1.266 0.00000000000000000000000000001978 132.0
DYD3_k127_3548107_3 Helix-turn-helix domain - - - 0.00000000000000000000001492 104.0
DYD3_k127_3548107_4 PFAM response regulator receiver - - - 0.0000000000000000003916 87.0
DYD3_k127_3548107_5 Immunoglobulin-like domain of bacterial spore germination - - - 0.00000004849 63.0
DYD3_k127_3614319_0 acyl-CoA dehydrogenase K00248 - 1.3.8.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002868 490.0
DYD3_k127_3614319_1 Belongs to the HpcH HpaI aldolase family K01644,K14447 - 4.1.3.34,5.4.99.63 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 325.0
DYD3_k127_3614319_2 Maoc domain protein dehydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001552 272.0
DYD3_k127_3614319_3 transcriptional regulator - - - 0.000000000000000000000005251 110.0
DYD3_k127_3614319_4 Colicin V production protein - - - 0.0000000000000000002316 101.0
DYD3_k127_3614319_5 Mycothiol maleylpyruvate isomerase N-terminal domain - - - 0.00000000000000001295 96.0
DYD3_k127_3647133_0 Methylmalonyl-CoA mutase K14447 - 5.4.99.63 3.504e-277 867.0
DYD3_k127_3647133_1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004225 472.0
DYD3_k127_3647133_2 Belongs to the DegT DnrJ EryC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000283 329.0
DYD3_k127_3647133_3 PFAM Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000002968 205.0
DYD3_k127_3647133_4 polysaccharide biosynthetic process K03980 - - 0.00000000000000000000000000000000000000000000003765 188.0
DYD3_k127_3647133_5 Acyl-CoA hydrolase K01075,K10806 - 3.1.2.23 0.0000000000000000000000000000000000000000001323 175.0
DYD3_k127_3647133_6 O-Antigen ligase K18814 - - 0.00000001062 69.0
DYD3_k127_3678719_0 Isocitrate/isopropylmalate dehydrogenase K00030 - 1.1.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008722 525.0
DYD3_k127_3678719_1 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000053 524.0
DYD3_k127_3678719_10 Molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 - - 0.0000000000000000000000000000000000000000000000000003248 197.0
DYD3_k127_3678719_11 Formyl transferase K11175 - 2.1.2.2 0.000000000000000000000000000000000000000000000000001029 198.0
DYD3_k127_3678719_12 PD-(D/E)XK nuclease superfamily - - - 0.00000000000000000000000000000000000000000000853 179.0
DYD3_k127_3678719_13 - K14340 - - 0.000000000000000000000000000000000001087 157.0
DYD3_k127_3678719_14 TOBE domain - - - 0.000000000000000000000000000001534 138.0
DYD3_k127_3678719_15 Rieske 2Fe-2S - - - 0.000000000000000000000000000008555 126.0
DYD3_k127_3678719_16 PFAM CBS domain - - - 0.00000000000000000000009556 104.0
DYD3_k127_3678719_17 Receptor family ligand binding region - - - 0.000004563 59.0
DYD3_k127_3678719_18 Cupredoxin-like domain - - - 0.00002986 56.0
DYD3_k127_3678719_19 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000531 56.0
DYD3_k127_3678719_2 Citrate synthase, C-terminal domain K01647 - 2.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002668 452.0
DYD3_k127_3678719_3 lactate/malate dehydrogenase, NAD binding domain K00016,K00024 - 1.1.1.27,1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001636 416.0
DYD3_k127_3678719_4 Methyltransferase type 11 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 411.0
DYD3_k127_3678719_5 Tryptophanyl-tRNA synthetase K01867 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944 6.1.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000144 399.0
DYD3_k127_3678719_6 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005151 302.0
DYD3_k127_3678719_7 Belongs to the ABC transporter superfamily K02017,K02018 - 3.6.3.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002692 297.0
DYD3_k127_3678719_8 Molybdate ABC transporter K02017,K02018 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 3.6.3.29 0.00000000000000000000000000000000000000000000000000000000000000000000002495 250.0
DYD3_k127_3678719_9 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000004768 241.0
DYD3_k127_3689694_0 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 483.0
DYD3_k127_3689694_1 PFAM Aminotransferase class I and II K10206 - 2.6.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000152 476.0
DYD3_k127_3689694_2 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 1.17.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000539 304.0
DYD3_k127_3689694_3 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005352 299.0
DYD3_k127_3689694_4 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0006355,GO:0006950,GO:0006974,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032991,GO:0032993,GO:0033554,GO:0042221,GO:0043565,GO:0044212,GO:0044464,GO:0045892,GO:0045934,GO:0046677,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051716,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141 3.4.21.88 0.00000000000000000000000000000000000000000000000000000000000002004 221.0
DYD3_k127_3689694_5 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.0000000000000000000000000000000000000000004426 163.0
DYD3_k127_3689694_6 LysM domain - - - 0.000000007106 60.0
DYD3_k127_3689694_7 Sortilin, neurotensin receptor 3, - - - 0.0000707 51.0
DYD3_k127_3691422_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 9.16e-199 642.0
DYD3_k127_3691422_1 Homocysteine S-methyltransferase K00297,K00547 - 1.5.1.20,2.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004162 622.0
DYD3_k127_3691422_10 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000714 344.0
DYD3_k127_3691422_11 Belongs to the ABC transporter superfamily K05816,K10112 - 3.6.3.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009228 348.0
DYD3_k127_3691422_12 acyl-CoA dehydrogenase K06446 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005086 321.0
DYD3_k127_3691422_13 TIGRFAM phosphate ABC transporter, inner membrane subunit PstA K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003794 319.0
DYD3_k127_3691422_14 ABC 3 transport family K09819,K11602,K19975,K19976 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 297.0
DYD3_k127_3691422_15 ATPases associated with a variety of cellular activities K09820,K11710,K19973 - 3.6.3.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001423 293.0
DYD3_k127_3691422_16 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002869 294.0
DYD3_k127_3691422_17 Response regulator receiver K07776 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009405,GO:0009889,GO:0010468,GO:0010556,GO:0010565,GO:0019216,GO:0019217,GO:0019219,GO:0019220,GO:0019222,GO:0031323,GO:0031326,GO:0044419,GO:0048583,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051252,GO:0051704,GO:0060255,GO:0062012,GO:0065007,GO:0080090,GO:0080134,GO:0097159,GO:1901363,GO:1902882,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001387 272.0
DYD3_k127_3691422_18 transmembrane transport K02025,K15771 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002596 265.0
DYD3_k127_3691422_19 binding-protein-dependent transport systems inner membrane component K02026 - - 0.000000000000000000000000000000000000000000000000000000000000000000003261 244.0
DYD3_k127_3691422_2 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005466 497.0
DYD3_k127_3691422_20 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000005658 235.0
DYD3_k127_3691422_21 Iron permease FTR1 K07243 - - 0.00000000000000000000000000000000000000000000000000000000000000002978 233.0
DYD3_k127_3691422_22 His Kinase A (phosphoacceptor) domain K07768 GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009405,GO:0009987,GO:0016020,GO:0016310,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044419,GO:0044464,GO:0046777,GO:0051704,GO:0071704,GO:0071944,GO:1901564 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000004492 228.0
DYD3_k127_3691422_23 Inositol monophosphatase family K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000001531 224.0
DYD3_k127_3691422_24 COG0491 Zn-dependent hydrolases, including glyoxylases K01069 - 3.1.2.6 0.0000000000000000000000000000000000000000000000000000000003321 214.0
DYD3_k127_3691422_25 protein histidine kinase activity K03320 - - 0.000000000000000000000000000000000000000000000000000000002263 227.0
DYD3_k127_3691422_26 Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol K15520 GO:0000302,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0006950,GO:0006979,GO:0008080,GO:0008150,GO:0008152,GO:0009058,GO:0009268,GO:0009628,GO:0009636,GO:0009987,GO:0010035,GO:0010125,GO:0010126,GO:0010447,GO:0016137,GO:0016138,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0033554,GO:0034599,GO:0034614,GO:0035447,GO:0035690,GO:0040007,GO:0042221,GO:0042493,GO:0042542,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044237,GO:0044249,GO:0044272,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0050896,GO:0051186,GO:0051188,GO:0051704,GO:0051716,GO:0070301,GO:0070887,GO:0071214,GO:0071236,GO:0071467,GO:0071468,GO:0071704,GO:0097237,GO:0104004,GO:1901135,GO:1901137,GO:1901576,GO:1901657,GO:1901659,GO:1901700,GO:1901701 2.3.1.189 0.00000000000000000000000000000000000000000000000000000004205 207.0
DYD3_k127_3691422_27 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000002327 200.0
DYD3_k127_3691422_28 pfam nudix - - - 0.00000000000000000000000000000000000000000000000405 184.0
DYD3_k127_3691422_29 Plays a role in the regulation of phosphate uptake K02039 - - 0.000000000000000000000000000000000000000000001095 173.0
DYD3_k127_3691422_3 Adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003478 473.0
DYD3_k127_3691422_30 Hydrolase - - - 0.00000000000000000000000000000000000000000000982 181.0
DYD3_k127_3691422_31 PFAM SMP-30 Gluconolaconase - - - 0.00000000000000000000000000000000000000000002807 178.0
DYD3_k127_3691422_32 Bacterial PH domain - - - 0.00000000000000000000000000000000005932 153.0
DYD3_k127_3691422_33 Ferric uptake regulator family K03711,K09825 - - 0.000000000000000000000000000000001983 136.0
DYD3_k127_3691422_34 COG COG0589 Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms - - - 0.000000000000000000000000000000005247 132.0
DYD3_k127_3691422_35 Ferric uptake regulator family K03711 - - 0.00000000000000000000000000000000872 132.0
DYD3_k127_3691422_36 PFAM UspA - - - 0.000000000000000000000000000001019 132.0
DYD3_k127_3691422_37 - - - - 0.000000000000000000000000000001175 132.0
DYD3_k127_3691422_38 Alpha beta hydrolase - - - 0.000000000000000000000000000005729 136.0
DYD3_k127_3691422_39 Chaperonin 10 Kd subunit K04078 - - 0.00000000000000000000000000002464 123.0
DYD3_k127_3691422_4 PFAM Adenylate and Guanylate cyclase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006967 404.0
DYD3_k127_3691422_40 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.0000000000000000000000001084 115.0
DYD3_k127_3691422_41 Immune inhibitor A peptidase M6 K09607 GO:0003674,GO:0003824,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0071704,GO:0140096,GO:1901564 - 0.0000000000000000000000003751 124.0
DYD3_k127_3691422_42 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.000000000000000000000001119 109.0
DYD3_k127_3691422_43 Transcriptional regulatory protein, C terminal K02483 - - 0.0000000000000000000002959 100.0
DYD3_k127_3691422_44 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.00000000000000000002609 100.0
DYD3_k127_3691422_45 Photosynthesis system II assembly factor YCF48 - - - 0.00000000001186 79.0
DYD3_k127_3691422_46 Protein conserved in bacteria - - - 0.00000000004822 71.0
DYD3_k127_3691422_47 Integral membrane protein TerC family - - - 0.0000001679 63.0
DYD3_k127_3691422_48 - - - - 0.00006608 51.0
DYD3_k127_3691422_5 Belongs to the bacterial solute-binding protein 9 family K09818 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001677 380.0
DYD3_k127_3691422_6 TIGRFAM phosphate binding protein K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002676 380.0
DYD3_k127_3691422_7 PFAM extracellular solute-binding protein family 1 K02027 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002537 392.0
DYD3_k127_3691422_8 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005884 368.0
DYD3_k127_3691422_9 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 - 2.9.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002141 359.0
DYD3_k127_3732431_0 Peptidase inhibitor I9 K20754 - 3.4.21.111 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 369.0
DYD3_k127_3732431_1 Subtilase family K14743 - - 0.0000002404 64.0
DYD3_k127_3732431_2 Protein of unknown function (DUF3105) - - - 0.00003299 53.0
DYD3_k127_3770733_0 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007609 349.0
DYD3_k127_3770733_1 Belongs to the TPP enzyme family K01652 GO:0000287,GO:0003674,GO:0003824,GO:0003984,GO:0005488,GO:0006082,GO:0006520,GO:0006549,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009097,GO:0009099,GO:0009987,GO:0016053,GO:0016740,GO:0016744,GO:0019752,GO:0019842,GO:0030976,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901681 2.2.1.6 0.0000000000000000000000000000000000000000000000000000109 192.0
DYD3_k127_3770733_2 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016020,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0040007,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.17 0.0000000000000000000000000000000000000000000007249 166.0
DYD3_k127_3792104_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 6.832e-312 972.0
DYD3_k127_3792104_1 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 1.033e-208 653.0
DYD3_k127_3792104_10 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000002477 236.0
DYD3_k127_3792104_11 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000001952 223.0
DYD3_k127_3792104_12 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000001071 218.0
DYD3_k127_3792104_13 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0008150,GO:0015934,GO:0016020,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0071944,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000007382 217.0
DYD3_k127_3792104_14 Forms part of the polypeptide exit tunnel K02926 - - 0.00000000000000000000000000000000000000000000000000000000002165 218.0
DYD3_k127_3792104_15 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008150,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000002467 205.0
DYD3_k127_3792104_16 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000001477 210.0
DYD3_k127_3792104_17 Involved in the binding of tRNA to the ribosomes K02946 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0019538,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000004542 183.0
DYD3_k127_3792104_18 binds to the 23S rRNA K02876 - - 0.000000000000000000000000000000000000000004072 158.0
DYD3_k127_3792104_19 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.0000000000000000000000000000000000000002372 152.0
DYD3_k127_3792104_2 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001128 522.0
DYD3_k127_3792104_20 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008150,GO:0015934,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071944,GO:1990904 - 0.00000000000000000000000000000000002615 143.0
DYD3_k127_3792104_21 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0008150,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000106 138.0
DYD3_k127_3792104_22 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000004459 133.0
DYD3_k127_3792104_23 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000003697 120.0
DYD3_k127_3792104_24 - - - - 0.0000000000000000000000000002048 126.0
DYD3_k127_3792104_25 One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000003889 118.0
DYD3_k127_3792104_26 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.0000000000000000000000005109 105.0
DYD3_k127_3792104_27 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.000000000000000003269 88.0
DYD3_k127_3792104_28 Ribosomal protein L30 K02907 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008150,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000106 75.0
DYD3_k127_3792104_29 structural constituent of ribosome K02919 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009536,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464 - 0.0005102 43.0
DYD3_k127_3792104_3 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005371 428.0
DYD3_k127_3792104_4 Metallopeptidase family M24 K01265 - 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 304.0
DYD3_k127_3792104_5 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0019538,GO:0022626,GO:0022627,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002976 291.0
DYD3_k127_3792104_6 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000005071 258.0
DYD3_k127_3792104_7 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000001292 251.0
DYD3_k127_3792104_8 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001773 240.0
DYD3_k127_3792104_9 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000004065 242.0
DYD3_k127_3796501_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 2.461e-274 865.0
DYD3_k127_3821170_0 5'-3' exonuclease - GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000771 275.0
DYD3_k127_3821170_1 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0040007,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.7.18 0.000000000000000000000000000000000000000000000000000000000000000000000000001257 259.0
DYD3_k127_3821170_10 COG3794 Plastocyanin - - - 0.000000001185 64.0
DYD3_k127_3821170_2 Domain of unknown function (DUF1996) - - - 0.000000000000000000000000000000000000000000000000000000000000000111 232.0
DYD3_k127_3821170_3 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000000000002003 209.0
DYD3_k127_3821170_4 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.00000000000000000000000001901 113.0
DYD3_k127_3821170_5 glyoxalase bleomycin resistance protein dioxygenase K06996 - - 0.00000000000000000005466 99.0
DYD3_k127_3821170_6 TIGRFAM cell envelope-related function transcriptional attenuator - - - 0.0000000000000000002486 103.0
DYD3_k127_3821170_7 translation initiation factor activity - - - 0.000000000000002303 85.0
DYD3_k127_3821170_8 Cupredoxin-like domain - - - 0.00000000002293 71.0
DYD3_k127_3821170_9 repeat protein - - - 0.0000000002351 61.0
DYD3_k127_3878567_0 ThiC-associated domain K03147 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.17 1.687e-255 795.0
DYD3_k127_3878567_1 Enoyl-CoA hydratase/isomerase K15866 - 5.3.3.18 0.0000000000000000000000000000000000000000000000000000000000000000001327 238.0
DYD3_k127_3878567_2 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000003535 218.0
DYD3_k127_3878567_3 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000000000000000000000000002234 189.0
DYD3_k127_3878567_4 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 0.00000002135 63.0
DYD3_k127_3878567_5 EthD domain - - - 0.00004881 53.0
DYD3_k127_3878567_6 Transcriptional regulatory protein, C terminal - - - 0.00006939 52.0
DYD3_k127_3884259_0 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001133 269.0
DYD3_k127_3884259_1 3-methyladenine DNA glycosylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008624 264.0
DYD3_k127_3884259_2 peptidase S8 and S53, subtilisin, kexin, sedolisin - - - 0.0000000000000000000000000000000000000000000000000000004522 218.0
DYD3_k127_3884259_3 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.0000000000000000000000000000000000000002593 158.0
DYD3_k127_3884259_4 Protein of unknown function (DUF983) - - - 0.00000000000000000000000005878 116.0
DYD3_k127_3884259_5 Inner membrane component of T3SS, cytoplasmic domain - GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0006109,GO:0006110,GO:0006140,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009892,GO:0009894,GO:0009895,GO:0009987,GO:0010563,GO:0010675,GO:0010677,GO:0016020,GO:0016310,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0030312,GO:0030808,GO:0030809,GO:0030811,GO:0030812,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031329,GO:0031330,GO:0036211,GO:0042325,GO:0042326,GO:0042802,GO:0043170,GO:0043412,GO:0043457,GO:0043467,GO:0043470,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0045820,GO:0045912,GO:0045934,GO:0045936,GO:0045980,GO:0046777,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051174,GO:0051193,GO:0051195,GO:0051196,GO:0051198,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:1900371,GO:1900372,GO:1900542,GO:1900543,GO:1901564,GO:1903578,GO:1903579,GO:2001169,GO:2001170 - 0.000000000000001524 84.0
DYD3_k127_3884259_6 response regulator - - - 0.00000000001528 72.0
DYD3_k127_3933205_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944 6.3.4.2 7.143e-238 746.0
DYD3_k127_3933205_1 COG0433 Predicted ATPase K06915 - - 2.358e-228 721.0
DYD3_k127_3933205_10 Putative exonuclease SbcCD, C subunit K03546 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003322 408.0
DYD3_k127_3933205_11 NADH dehydrogenase K12138 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001896 369.0
DYD3_k127_3933205_12 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008704 360.0
DYD3_k127_3933205_13 Cellulose biosynthesis protein BcsQ K03496 GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0008150,GO:0009295,GO:0016020,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044424,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 349.0
DYD3_k127_3933205_14 SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity K03547 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003929 319.0
DYD3_k127_3933205_15 tyrosine recombinase K04763 GO:0008150,GO:0040007 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002139 297.0
DYD3_k127_3933205_16 COGs COG2380 conserved - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007993 287.0
DYD3_k127_3933205_17 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000001646 263.0
DYD3_k127_3933205_18 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003954 276.0
DYD3_k127_3933205_19 Prephenate dehydrogenase K00210,K04517 - 1.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000009973 250.0
DYD3_k127_3933205_2 Proton-conducting membrane transporter K12137 - - 2.07e-205 663.0
DYD3_k127_3933205_20 NADH ubiquinone oxidoreductase, 20 - - - 0.00000000000000000000000000000000000000000000000000000000000000000004014 237.0
DYD3_k127_3933205_21 acyl esterases K06978 - - 0.0000000000000000000000000000000000000000000000000000000000000000000773 254.0
DYD3_k127_3933205_22 RNA pseudouridylate synthase K06178,K06183 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0040007,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.19,5.4.99.22 0.0000000000000000000000000000000000000000000000000000000000000000001748 245.0
DYD3_k127_3933205_23 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.0000000000000000000000000000000000000000000000000000000000002602 223.0
DYD3_k127_3933205_24 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.0000000000000000000000000000000000000000000000000000000001542 209.0
DYD3_k127_3933205_25 helix_turn_helix, mercury resistance - - - 0.00000000000000000000000000000000000000000000000000002014 193.0
DYD3_k127_3933205_26 Alternative locus ID - - - 0.0000000000000000000000000000000000000000000000000001497 191.0
DYD3_k127_3933205_27 Bifunctional nuclease K08999 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000001018 188.0
DYD3_k127_3933205_28 FHA domain containing protein - - - 0.000000000000000000000000000000000000000000000000002443 188.0
DYD3_k127_3933205_29 PFAM regulatory protein, MerR - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0040007,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000001279 189.0
DYD3_k127_3933205_3 Respiratory-chain NADH dehydrogenase, 30 Kd subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001843 599.0
DYD3_k127_3933205_30 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.000000000000000000000000000000000000000000001007 169.0
DYD3_k127_3933205_31 Hydrogenase 4 membrane K12140 GO:0008150,GO:0040007 - 0.000000000000000000000000000000000000000001232 168.0
DYD3_k127_3933205_32 Cytidylate kinase-like family K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.000000000000000000000000000000000000000002584 171.0
DYD3_k127_3933205_33 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.0000000000000000000000000000000000000001972 164.0
DYD3_k127_3933205_34 Bacterial protein of unknown function (DUF881) - GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000001244 154.0
DYD3_k127_3933205_35 Cytidylate kinase-like family K00760 - 2.4.2.8 0.00000000000000000000000000000000000002137 149.0
DYD3_k127_3933205_36 Protein of unknown function (DUF1290) - - - 0.000000000000000000000000000000002257 132.0
DYD3_k127_3933205_37 Chorismate mutase type I K06208 - 5.4.99.5 0.00000000000000000000000000000001277 131.0
DYD3_k127_3933205_38 Peptidase M50 - - - 0.00000000000000000000000000000006924 133.0
DYD3_k127_3933205_39 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan - - - 0.0000000000000000000000000000001067 137.0
DYD3_k127_3933205_4 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005601 571.0
DYD3_k127_3933205_40 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 GO:0003674,GO:0003824,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008444,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016740,GO:0016772,GO:0016780,GO:0017169,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0090407,GO:1901576 2.7.8.41,2.7.8.5 0.000000000000000000000000000002462 128.0
DYD3_k127_3933205_41 protein conserved in bacteria - GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.000000000000000000000000000004639 135.0
DYD3_k127_3933205_42 transcriptional K03892 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000002218 115.0
DYD3_k127_3933205_44 - - - - 0.000000000000000001261 92.0
DYD3_k127_3933205_45 CarD family transcriptional regulator K07736 GO:0006950,GO:0007154,GO:0008150,GO:0009267,GO:0009405,GO:0009605,GO:0009987,GO:0009991,GO:0015968,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0040007,GO:0042594,GO:0044419,GO:0050896,GO:0051704,GO:0051716,GO:0071496 - 0.00000000000000002832 91.0
DYD3_k127_3933205_46 COG0500 SAM-dependent methyltransferases K03183 - 2.1.1.163,2.1.1.201 0.00000000000000006046 96.0
DYD3_k127_3933205_47 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.0000000000000381 76.0
DYD3_k127_3933205_48 Domain of unknown function (DUF4193) - - - 0.0000000000003197 72.0
DYD3_k127_3933205_49 Glycosyltransferase, group 2 family - - - 0.000000000003659 68.0
DYD3_k127_3933205_5 Formate hydrogenlyase subunit 3 Multisubunit Na H antiporter, MnhD subunit K12141 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002491 519.0
DYD3_k127_3933205_50 exo-alpha-(2->6)-sialidase activity - - - 0.00000001739 67.0
DYD3_k127_3933205_6 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001984 456.0
DYD3_k127_3933205_7 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000044 449.0
DYD3_k127_3933205_8 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003631 445.0
DYD3_k127_3933205_9 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001773 421.0
DYD3_k127_3938516_0 DSHCT K03727 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009056,GO:0009057,GO:0009987,GO:0016020,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019439,GO:0030312,GO:0034641,GO:0034655,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0070035,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:1901360,GO:1901361,GO:1901575 - 3.082e-242 790.0
DYD3_k127_3938516_1 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009028 477.0
DYD3_k127_3938516_10 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.0000000000000000000000000000000000000000000000003625 184.0
DYD3_k127_3938516_11 SnoaL-like domain - - - 0.00000000000000000000000000000000000000000000003234 186.0
DYD3_k127_3938516_12 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000379 187.0
DYD3_k127_3938516_13 Diacylglycerol kinase catalytic domain - - - 0.00000000000000000000000000000000000000000001098 178.0
DYD3_k127_3938516_14 Belongs to the DsbB family K03611 - - 0.000000000000000000000000000000000000001237 154.0
DYD3_k127_3938516_15 - - - - 0.00000000000000000000000000000003632 136.0
DYD3_k127_3938516_16 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000002604 137.0
DYD3_k127_3938516_17 Redoxin - - - 0.0000000000000000000000003062 115.0
DYD3_k127_3938516_18 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000000711 72.0
DYD3_k127_3938516_19 PFAM NLP P60 protein - - - 0.00000000000165 76.0
DYD3_k127_3938516_2 Belongs to the peptidase M24B family K01271,K01274 - 3.4.13.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002643 383.0
DYD3_k127_3938516_3 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00111 - 1.1.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009211 389.0
DYD3_k127_3938516_4 amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 319.0
DYD3_k127_3938516_5 FAD linked oxidases, C-terminal domain K00803 - 2.5.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002675 314.0
DYD3_k127_3938516_6 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001879 284.0
DYD3_k127_3938516_7 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002102 273.0
DYD3_k127_3938516_8 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000002813 225.0
DYD3_k127_3938516_9 Diacylglycerol kinase catalytic domain K07029 GO:0003674,GO:0003824,GO:0004143,GO:0005575,GO:0005623,GO:0005886,GO:0006629,GO:0006643,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009247,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044464,GO:0046467,GO:0071704,GO:0071944,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.1.107 0.0000000000000000000000000000000000000000000000000000000001086 230.0
DYD3_k127_3940180_0 Circularly permuted ATP-grasp type 2 - - - 5.198e-223 702.0
DYD3_k127_3940180_1 - - - - 3.302e-199 661.0
DYD3_k127_3940180_10 dioxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000006976 243.0
DYD3_k127_3940180_11 COG1305 Transglutaminase-like enzymes - - - 0.000000000000000000000000000000000000000000000000000000001442 211.0
DYD3_k127_3940180_12 Mycothiol maleylpyruvate isomerase N-terminal domain - - - 0.000000000000000000000000000000000000000000003188 169.0
DYD3_k127_3940180_14 MDMPI C-terminal domain - - - 0.000000000000000000000000000000000000001523 160.0
DYD3_k127_3940180_15 - - - - 0.000000000000000000000000000000001564 145.0
DYD3_k127_3940180_16 histidyl-tRNA synthetase - - - 0.0000000000000000000000001208 119.0
DYD3_k127_3940180_17 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.000000000005668 75.0
DYD3_k127_3940180_18 HD domain - - - 0.000000003518 65.0
DYD3_k127_3940180_19 pyrroloquinoline quinone binding - - - 0.000003218 61.0
DYD3_k127_3940180_2 antibiotic catabolic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006315 451.0
DYD3_k127_3940180_20 Matrixin - - - 0.0002341 54.0
DYD3_k127_3940180_3 PFAM fumarylacetoacetate (FAA) hydrolase K01555 - 3.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007551 422.0
DYD3_k127_3940180_4 PFAM Bacterial domain of - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002856 381.0
DYD3_k127_3940180_5 PHP domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005495 367.0
DYD3_k127_3940180_6 GlcNAc-PI de-N-acetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 324.0
DYD3_k127_3940180_7 HAD-superfamily subfamily IB hydrolase, TIGR01490 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000555 321.0
DYD3_k127_3940180_8 PFAM 20S proteasome, A and B subunits K07395 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 312.0
DYD3_k127_3940180_9 NAD dependent epimerase/dehydratase family K05281 - 1.3.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001482 288.0
DYD3_k127_395283_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 6.215e-249 818.0
DYD3_k127_395283_1 Flavin containing amine oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 388.0
DYD3_k127_395283_2 Acetyltransferase (GNAT) family K06976 - - 0.000000000000000000000000000000000000000000000000006328 195.0
DYD3_k127_395283_3 Domain of unknown function (DUF2088) - - - 0.00000000000000000000000000000000000000000000000001073 198.0
DYD3_k127_395283_4 domain, Protein K12132 - 2.7.11.1 0.000000000000000000000000000000000000000003949 172.0
DYD3_k127_395283_5 Domain of unknown function (DUF4159) - - - 0.00000000000000000000002592 100.0
DYD3_k127_395283_6 Sigma-70, region 4 - - - 0.00000000000000000001597 100.0
DYD3_k127_395283_8 thiolester hydrolase activity K06889 - - 0.000002921 61.0
DYD3_k127_3954032_0 Polysaccharide biosynthesis protein K03328 - - 0.0000000000000000000000000000000000000000000000000000000000001737 233.0
DYD3_k127_3954032_1 Glycosyl transferase, family 2 K20444 - - 0.0000000000000000000000000000000000000000001911 169.0
DYD3_k127_3954032_2 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000008532 162.0
DYD3_k127_3954032_3 glycogen (starch) synthase activity - - - 0.000000000000000000000000000000157 135.0
DYD3_k127_3954032_4 O-acyltransferase activity - - - 0.000000000000000000000000317 115.0
DYD3_k127_3954032_5 Methyltransferase type 11 - - - 0.00000000000000000000002858 113.0
DYD3_k127_3954032_6 Methyltransferase domain - - - 0.0000000000000000000000307 112.0
DYD3_k127_3954032_7 Methyltransferase domain - - - 0.00000000000000000000007522 111.0
DYD3_k127_3956375_0 CHASE2 K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008627 293.0
DYD3_k127_3956375_1 Protein of unknown function (DUF2283) - - - 0.0001959 47.0
DYD3_k127_3969758_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000366 379.0
DYD3_k127_3969758_1 TIGRFAM parallel beta-helix - - - 0.00004658 56.0
DYD3_k127_3971543_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 551.0
DYD3_k127_3971543_1 belongs to the aldehyde dehydrogenase family K00130 - 1.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002814 534.0
DYD3_k127_3971543_10 Iron-sulfur cluster assembly protein K02612 - - 0.000000000000000000000000000000000000002234 155.0
DYD3_k127_3971543_11 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000005867 162.0
DYD3_k127_3971543_12 Belongs to the peptidase S8 family K08651 - 3.4.21.66 0.000000000000000000000000000000000001095 157.0
DYD3_k127_3971543_13 HIT domain K02503 - - 0.000000000000000000000000000000003166 135.0
DYD3_k127_3971543_14 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000165 95.0
DYD3_k127_3971543_15 Phenylacetate-CoA oxygenase subunit PaaH K02610 - - 0.00000000004079 67.0
DYD3_k127_3971543_16 glyoxalase III activity - - - 0.0000004056 63.0
DYD3_k127_3971543_2 TIGRFAM Ammonium transporter K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001935 499.0
DYD3_k127_3971543_3 TIGRFAM phenylacetate-CoA oxygenase, PaaG subunit K02609 - 1.14.13.149 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004662 400.0
DYD3_k127_3971543_4 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007172 393.0
DYD3_k127_3971543_5 Von Willebrand factor type A K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001143 267.0
DYD3_k127_3971543_6 Methyltransferase type 11 - - - 0.0000000000000000000000000000000000000000000000000000000000001808 220.0
DYD3_k127_3971543_7 Protein of unknown function DUF58 - - - 0.0000000000000000000000000000000000000000000000000000000000004988 224.0
DYD3_k127_3971543_8 Phenylacetate-CoA oxygenase K02611 - 1.14.13.149 0.000000000000000000000000000000000000000000000000000000000205 213.0
DYD3_k127_3971543_9 PFAM Inositol monophosphatase K01092,K05602 - 3.1.3.15,3.1.3.25 0.0000000000000000000000000000000000000000000000000000003262 209.0
DYD3_k127_4002207_0 CoA-binding domain K15894,K17716 - 4.2.1.115,5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004905 425.0
DYD3_k127_4002207_1 DegT/DnrJ/EryC1/StrS aminotransferase family K13010 - 2.6.1.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006041 377.0
DYD3_k127_4002207_2 Polysaccharide biosynthesis protein K01710,K01784 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944 4.2.1.46,5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008188 286.0
DYD3_k127_4002207_3 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000007774 125.0
DYD3_k127_4002207_4 ECF sigma factor K03088 - - 0.000000000000000000009001 106.0
DYD3_k127_4029425_0 Peptidase inhibitor I9 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000664 454.0
DYD3_k127_4029425_1 family outer membrane protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003427 477.0
DYD3_k127_4029425_2 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001451 392.0
DYD3_k127_4029425_3 Carbon-nitrogen hydrolase K01501 - 3.5.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005326 343.0
DYD3_k127_4029425_4 tRNA rRNA methyltransferase K00556 - 2.1.1.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001463 319.0
DYD3_k127_4029425_5 acetyltransferase K03823 - 2.3.1.183 0.0000000000000000000000000000000000000000000000000000000003029 220.0
DYD3_k127_4029425_6 mitochondrial respiratory chain complex IV assembly K14998 GO:0005575,GO:0005618,GO:0005623,GO:0008150,GO:0030312,GO:0040007,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044403,GO:0044419,GO:0044464,GO:0051704,GO:0071944 - 0.00000000000000000000000000000000000000002892 164.0
DYD3_k127_4029425_7 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K01281 - 3.4.14.11 0.0000000000000000000000000000000000001659 156.0
DYD3_k127_4029425_8 YceI-like domain - - - 0.00000000000000000000000000008668 127.0
DYD3_k127_4029425_9 addiction module antidote protein HigA K21498 - - 0.00000000000001291 75.0
DYD3_k127_4068345_0 associated with various cellular activities K03696 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006457,GO:0008150,GO:0009987,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030312,GO:0040007,GO:0042802,GO:0042803,GO:0044183,GO:0044424,GO:0044444,GO:0044464,GO:0046983,GO:0071944 - 0.0 1298.0
DYD3_k127_4068345_1 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 529.0
DYD3_k127_4068345_2 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000913 285.0
DYD3_k127_4068345_3 Putative restriction endonuclease - - - 0.000000000000000000000000000000000000007635 154.0
DYD3_k127_4068345_4 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281 - 1.4.4.2 0.00000000000000000000000005076 109.0
DYD3_k127_4068345_5 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.000000000004625 66.0
DYD3_k127_4139951_0 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 GO:0003674,GO:0003824,GO:0004038,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006145,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009112,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0019439,GO:0034641,GO:0040007,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 496.0
DYD3_k127_4139951_1 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016491,GO:0016651,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 418.0
DYD3_k127_4139951_10 Type IV leader peptidase family K02654 - 3.4.23.43 0.00000000000000000000000000000000000000000000000000000000000001411 224.0
DYD3_k127_4139951_11 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant K02825 GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 2.4.2.9 0.00000000000000000000000000000000000000000000000000000000000002067 220.0
DYD3_k127_4139951_12 Belongs to the CarA family K01956 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000006005 207.0
DYD3_k127_4139951_14 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000157 161.0
DYD3_k127_4139951_15 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0019438,GO:0019632,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0035639,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0046872,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 0.000000000000000000000000000005462 127.0
DYD3_k127_4139951_16 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 GO:0008150,GO:0040007 - 0.0000000000000000000000009756 115.0
DYD3_k127_4139951_17 polysaccharide biosynthetic process - - - 0.00000000000000000000007786 113.0
DYD3_k127_4139951_18 Methionine biosynthesis protein MetW K18827 - 2.1.1.294,2.7.1.181 0.00000000000000000002699 104.0
DYD3_k127_4139951_19 transcriptional regulator - - - 0.0000000000001472 72.0
DYD3_k127_4139951_2 Belongs to the ATCase OTCase family K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030312,GO:0034641,GO:0034654,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 394.0
DYD3_k127_4139951_20 Type II secretion system (T2SS), protein M K02664 - - 0.000000003873 68.0
DYD3_k127_4139951_21 cellulase activity - - - 0.000000006148 68.0
DYD3_k127_4139951_22 sugar transferase - - - 0.0000001066 53.0
DYD3_k127_4139951_23 Prokaryotic N-terminal methylation motif K02456,K02650 - - 0.0000001768 60.0
DYD3_k127_4139951_24 PFAM Fimbrial assembly family protein K02663 - - 0.0000005911 59.0
DYD3_k127_4139951_3 Glycosyl transferase WecB/TagA/CpsF family K05946 - 2.4.1.187 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003369 322.0
DYD3_k127_4139951_4 Type IV pilus assembly protein PilM; K02662 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003643 317.0
DYD3_k127_4139951_5 Creatinase/Prolidase N-terminal domain K01262,K01271 GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0016787,GO:0019538,GO:0030145,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.11.9,3.4.13.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002124 314.0
DYD3_k127_4139951_6 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005823 282.0
DYD3_k127_4139951_7 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001249 267.0
DYD3_k127_4139951_8 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 GO:0003674,GO:0003824,GO:0003856,GO:0005488,GO:0005507,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0016020,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0030312,GO:0040007,GO:0043167,GO:0043169,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0046872,GO:0046914,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.71,4.2.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000004035 265.0
DYD3_k127_4139951_9 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.000000000000000000000000000000000000000000000000000000000000002244 231.0
DYD3_k127_4258396_0 NAD(P)H-binding K17947 - 5.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 321.0
DYD3_k127_4258396_1 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009482 301.0
DYD3_k127_4258396_10 biosynthesis protein K08253 - 2.7.10.2 0.000000000000000000000000000000003361 148.0
DYD3_k127_4258396_11 Methionine biosynthesis protein MetW - - - 0.00000000000000000000000000004687 130.0
DYD3_k127_4258396_12 Glycosyl transferases group 1 - - - 0.0000000000000000000000000003417 133.0
DYD3_k127_4258396_13 PFAM glycosyl transferase group 1 K02844,K14335 - - 0.0000000000000000000000008726 119.0
DYD3_k127_4258396_14 - - - - 0.000000000000000000000193 104.0
DYD3_k127_4258396_15 Glycosyl transferases group 1 - - - 0.000000000000000003958 96.0
DYD3_k127_4258396_2 GHMP kinases C terminal K07031 - 2.7.1.168 0.00000000000000000000000000000000000000000000000000000000000000002227 238.0
DYD3_k127_4258396_3 Nucleotidyl transferase K16881 - 2.7.7.13,5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000269 216.0
DYD3_k127_4258396_4 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000001556 200.0
DYD3_k127_4258396_5 TIGRFAM histidinol-phosphate phosphatase family protein K03273 - 3.1.3.82,3.1.3.83 0.00000000000000000000000000000000000000000002505 174.0
DYD3_k127_4258396_6 PFAM sugar transferase - - - 0.000000000000000000000000000000000000000000457 182.0
DYD3_k127_4258396_7 GHMP kinases C terminal K07031 - 2.7.1.168 0.0000000000000000000000000000000000000000005888 172.0
DYD3_k127_4258396_8 - - - - 0.0000000000000000000000000000000000006789 158.0
DYD3_k127_4258396_9 glycosyl transferase group 1 K13668 - 2.4.1.346 0.0000000000000000000000000000000003766 146.0
DYD3_k127_4266727_0 PFAM AMP-dependent synthetase and ligase K00666 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002012 504.0
DYD3_k127_4266727_1 Belongs to the binding-protein-dependent transport system permease family K01995,K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000503 301.0
DYD3_k127_4266727_10 RDD family - - - 0.0003862 51.0
DYD3_k127_4266727_2 carboxylic ester hydrolase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000002915 234.0
DYD3_k127_4266727_3 Abc transporter K01996 - - 0.000000000000000000000000000000000000000000000000000005266 217.0
DYD3_k127_4266727_4 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000008626 197.0
DYD3_k127_4266727_5 Psort location CytoplasmicMembrane, score 10.00 K01997 - - 0.000000000000000000000003642 115.0
DYD3_k127_4266727_6 acetyltransferases and hydrolases with the alpha beta hydrolase fold K01046 - 3.1.1.3 0.000000000000004168 89.0
DYD3_k127_4266727_7 acetyltransferases and hydrolases with the alpha beta hydrolase fold K01046 - 3.1.1.3 0.000000000007754 76.0
DYD3_k127_4266727_8 PFAM response regulator receiver K07689 - - 0.00000000005342 68.0
DYD3_k127_4266727_9 Receptor family ligand binding region - - - 0.000001346 61.0
DYD3_k127_4271402_0 ERAP1-like C-terminal domain K01256,K08776 - 3.4.11.2 4.044e-273 871.0
DYD3_k127_4271402_1 Acyclic terpene utilisation family protein AtuA - - - 1.688e-210 669.0
DYD3_k127_4271402_10 Cupredoxin-like domain - - - 0.000000000000000000001091 102.0
DYD3_k127_4271402_11 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000009718 83.0
DYD3_k127_4271402_12 Bacterial Ig-like domain 2 - - - 0.00000000002845 73.0
DYD3_k127_4271402_13 Neutral/alkaline non-lysosomal ceramidase, N-terminal - - - 0.000000001574 70.0
DYD3_k127_4271402_14 cellulase activity K08884 - 2.7.11.1 0.000002203 57.0
DYD3_k127_4271402_15 Extracellular liganD-binding receptor - - - 0.0004225 54.0
DYD3_k127_4271402_2 Pyridoxal-dependent decarboxylase conserved domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 554.0
DYD3_k127_4271402_3 Threonine aldolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 398.0
DYD3_k127_4271402_4 Arylsulfotransferase (ASST) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003014 393.0
DYD3_k127_4271402_5 ATPase activity K15073 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002191 331.0
DYD3_k127_4271402_6 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 293.0
DYD3_k127_4271402_7 Alpha beta hydrolase K01055 - 3.1.1.24 0.00000000000000000000000000000000000000000000000009633 197.0
DYD3_k127_4271402_8 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.000000000000000000000000000000000000000000000005901 196.0
DYD3_k127_4271402_9 Alpha/beta hydrolase family - - - 0.000000000000000000000001448 114.0
DYD3_k127_4308623_0 TIGRFAM Acetolactate synthase, large subunit, biosynthetic K01652 GO:0000287,GO:0003674,GO:0003824,GO:0003984,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0006082,GO:0006520,GO:0006549,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009097,GO:0009099,GO:0009987,GO:0016053,GO:0016740,GO:0016744,GO:0019752,GO:0019842,GO:0030312,GO:0030976,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0046872,GO:0048037,GO:0050662,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901681 2.2.1.6 3.485e-249 781.0
DYD3_k127_4308623_1 Belongs to the IlvD Edd family K01687 GO:0003674,GO:0003824,GO:0004160,GO:0005575,GO:0005623,GO:0005886,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009987,GO:0016020,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0019752,GO:0040007,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576 4.2.1.9 2.737e-219 694.0
DYD3_k127_4308623_10 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 6.3.5.6,6.3.5.7 0.000000000000000000000007115 102.0
DYD3_k127_4308623_11 Domain of unknown function (DUF4190) - - - 0.000000000857 65.0
DYD3_k127_4308623_12 Sigma-70, region 4 - - - 0.000000004155 62.0
DYD3_k127_4308623_13 Domain of unknown function (DUF4190) - - - 0.000006375 54.0
DYD3_k127_4308623_14 - - - - 0.0003859 52.0
DYD3_k127_4308623_2 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002538 580.0
DYD3_k127_4308623_3 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001627 484.0
DYD3_k127_4308623_4 transposase IS116 IS110 IS902 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002116 477.0
DYD3_k127_4308623_5 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007806 481.0
DYD3_k127_4308623_6 Acetolactate synthase K01653 GO:0003674,GO:0003824,GO:0003984,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005948,GO:0006082,GO:0006520,GO:0006549,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009097,GO:0009099,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016744,GO:0019752,GO:0030312,GO:0032991,GO:0040007,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494,GO:1990234 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000003302 225.0
DYD3_k127_4308623_7 Isochorismatase family - - - 0.0000000000000000000000000000000000006974 149.0
DYD3_k127_4308623_8 - - - - 0.0000000000000000000000000000003342 134.0
DYD3_k127_4308623_9 Peptidase family S51 - - - 0.0000000000000000000000000003343 124.0
DYD3_k127_4314144_0 MoeA C-terminal region (domain IV) K00963,K03750 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006163,GO:0006464,GO:0006725,GO:0006732,GO:0006753,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009144,GO:0009150,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0018315,GO:0019538,GO:0019637,GO:0019693,GO:0019720,GO:0032324,GO:0034641,GO:0036211,GO:0042040,GO:0042278,GO:0043170,GO:0043412,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046039,GO:0046128,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0061598,GO:0061599,GO:0070566,GO:0071704,GO:0071944,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657 2.10.1.1,2.7.7.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004133 287.0
DYD3_k127_4314144_1 Mo-molybdopterin cofactor metabolic process K03635,K03831,K09121 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009144,GO:0009150,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019538,GO:0019637,GO:0019693,GO:0032324,GO:0034641,GO:0042278,GO:0042802,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046039,GO:0046128,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0061598,GO:0070566,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657 2.7.7.75,2.8.1.12,4.99.1.12 0.0000000000000000000000000000000000000098 156.0
DYD3_k127_4314144_2 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.0000000000000000000000000000001205 132.0
DYD3_k127_4314144_3 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.7.7.77 0.0000000000000006303 87.0
DYD3_k127_4314144_4 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.00000000136 59.0
DYD3_k127_4337454_0 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000177 151.0
DYD3_k127_4337454_1 Anti-sigma-K factor rskA - - - 0.00000000000002537 82.0
DYD3_k127_4337454_2 Multicopper - - - 0.0000000000000391 83.0
DYD3_k127_4337454_3 amine dehydrogenase activity - - - 0.0001189 51.0
DYD3_k127_4339773_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 565.0
DYD3_k127_4339773_1 DUF35 OB-fold domain, acyl-CoA-associated - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001934 563.0
DYD3_k127_4339773_10 Protein of unknown function (DUF2442) - - - 0.00000000000000008165 85.0
DYD3_k127_4339773_2 Mo-co oxidoreductase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005733 457.0
DYD3_k127_4339773_3 acyl-CoA dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003917 437.0
DYD3_k127_4339773_4 RES - - - 0.0000000000000000000000000000000000000000000000000000000000003684 218.0
DYD3_k127_4339773_5 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase K03660 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000001604 219.0
DYD3_k127_4339773_6 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins - - - 0.000000000000000000000000000000000000000000003354 174.0
DYD3_k127_4339773_7 Protein of unknown function (DUF2384) - - - 0.000000000000000000000000000000000006114 141.0
DYD3_k127_4339773_8 CGNR zinc finger - - - 0.00000000000000000000000000000000001262 147.0
DYD3_k127_4339773_9 Domain of unknown function (DUF4160) - - - 0.0000000000000000000000003515 106.0
DYD3_k127_434357_0 ABC-type multidrug transport system, ATPase and permease K06147 - - 1.252e-212 677.0
DYD3_k127_4347006_0 Carboxyl transferase domain - - - 4.215e-221 703.0
DYD3_k127_4347006_1 acyl-CoA dehydrogenase K00248,K11410 GO:0000062,GO:0000166,GO:0003674,GO:0003824,GO:0003995,GO:0004085,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005759,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0006950,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009605,GO:0009719,GO:0009725,GO:0009987,GO:0009991,GO:0010033,GO:0014070,GO:0016020,GO:0016042,GO:0016043,GO:0016054,GO:0016491,GO:0016627,GO:0017076,GO:0019395,GO:0019605,GO:0019626,GO:0019752,GO:0022607,GO:0030258,GO:0030554,GO:0031090,GO:0031667,GO:0031960,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0033218,GO:0033539,GO:0033993,GO:0034440,GO:0036094,GO:0042221,GO:0042594,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046359,GO:0046395,GO:0046459,GO:0048037,GO:0048545,GO:0050660,GO:0050662,GO:0050896,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0051384,GO:0052890,GO:0055114,GO:0065003,GO:0070013,GO:0071704,GO:0071840,GO:0072329,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901567,GO:1901575,GO:1901681 1.3.8.1,1.3.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 505.0
DYD3_k127_4347006_10 Tfp pilus assembly protein FimV - - - 0.0001105 54.0
DYD3_k127_4347006_2 potassium ion transport - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004827 391.0
DYD3_k127_4347006_3 HMGL-like K01640 - 4.1.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 336.0
DYD3_k127_4347006_4 Integral membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003779 331.0
DYD3_k127_4347006_5 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001405 284.0
DYD3_k127_4347006_6 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.0000000000000000000000000000000000000008116 157.0
DYD3_k127_4347006_7 Phosphodiester glycosidase - - - 0.0000000000000000000000000000000008114 149.0
DYD3_k127_4347006_8 ECF sigma factor K03088 - - 0.0000000000000000000000000000006332 130.0
DYD3_k127_4347006_9 Pfam:Pyridox_oxidase - - - 0.000004518 54.0
DYD3_k127_4403620_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001733 413.0
DYD3_k127_4412648_0 Camelysin metallo-endopeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000001158 225.0
DYD3_k127_4412648_1 Belongs to the peptidase S26 family K13280 - 3.4.21.89 0.00000000000000000000000000000001013 136.0
DYD3_k127_4412648_2 Glycosyl hydrolase family 9 K01179 - 3.2.1.4 0.000004184 54.0
DYD3_k127_4447326_0 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005083 417.0
DYD3_k127_4447326_1 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 GO:0000287,GO:0003674,GO:0003824,GO:0004749,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006015,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016778,GO:0019637,GO:0019693,GO:0030145,GO:0030312,GO:0040007,GO:0043167,GO:0043169,GO:0044237,GO:0044464,GO:0046390,GO:0046391,GO:0046872,GO:0046914,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901576 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001894 390.0
DYD3_k127_4447326_10 CarboxypepD_reg-like domain K13276,K17734 - - 0.00000003638 67.0
DYD3_k127_4447326_2 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000004815 254.0
DYD3_k127_4447326_3 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0016787,GO:0016788,GO:0040007,GO:0044464,GO:0052689,GO:0071944,GO:0140098,GO:0140101 3.1.1.29 0.000000000000000000000000000000000000000000000000000000000000000002024 232.0
DYD3_k127_4447326_4 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 0.00000000000000000000000000000000000000000000000000000000002088 220.0
DYD3_k127_4447326_5 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0040007,GO:0044237,GO:0050515 2.7.1.148 0.000000000000000000000000000000000000000000000000000000007527 220.0
DYD3_k127_4447326_6 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000001493 141.0
DYD3_k127_4447326_7 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K21688 GO:0005575,GO:0005576,GO:0008150,GO:0009892,GO:0009893,GO:0010468,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019222,GO:0022611,GO:0032502,GO:0040008,GO:0040009,GO:0040010,GO:0044111,GO:0044114,GO:0044115,GO:0044403,GO:0044419,GO:0045927,GO:0048518,GO:0048519,GO:0050789,GO:0051704,GO:0060255,GO:0065007,GO:0085016 - 0.000000000000000000000000004932 122.0
DYD3_k127_4447326_8 Belongs to the peptidase S8 family K13276,K17734 - - 0.000000000000000000000227 113.0
DYD3_k127_4447326_9 Transposase IS200 like K07491 - - 0.00000003189 58.0
DYD3_k127_45307_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005608 405.0
DYD3_k127_45307_1 TIGRFAM stage V sporulation protein E, cell division protein FtsW K03588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003552 319.0
DYD3_k127_45307_2 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001734 282.0
DYD3_k127_45307_3 Cell wall formation K00075 - 1.3.1.98 0.0000000000000000000000000000000000000000000000000006691 202.0
DYD3_k127_45307_4 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0040007,GO:0044424,GO:0044444,GO:0044464 6.3.2.9 0.000000000000000000000000000000009484 136.0
DYD3_k127_45307_5 Cell division protein FtsQ K03589 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0040007,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0071944 - 0.000000000000000000002069 105.0
DYD3_k127_4611615_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0 1045.0
DYD3_k127_4611615_1 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002415 544.0
DYD3_k127_4611615_10 Sigma 54 modulation protein / S30EA ribosomal protein K05808 - - 0.0000000000000000000004581 104.0
DYD3_k127_4611615_11 - - - - 0.0000000000000001096 90.0
DYD3_k127_4611615_12 Trm112p-like protein K09791 - - 0.000000000000001653 77.0
DYD3_k127_4611615_2 Phosphoglucomutase/phosphomannomutase, C-terminal domain K01840 GO:0000271,GO:0000287,GO:0003674,GO:0003824,GO:0004614,GO:0004615,GO:0005488,GO:0005975,GO:0005976,GO:0006082,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009243,GO:0009244,GO:0009311,GO:0009312,GO:0009405,GO:0009987,GO:0016051,GO:0016053,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0019752,GO:0033692,GO:0034637,GO:0034645,GO:0042120,GO:0042121,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044283,GO:0044419,GO:0046394,GO:0046401,GO:0046402,GO:0046872,GO:0051704,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002613 536.0
DYD3_k127_4611615_3 Response regulator receiver K02479 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000043 347.0
DYD3_k127_4611615_4 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 307.0
DYD3_k127_4611615_5 COG2931, RTX toxins and related Ca2 -binding proteins K20276 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001968 325.0
DYD3_k127_4611615_6 TIGRFAM bifunctional phosphoglucose phosphomannose isomerase K15916 - 5.3.1.8,5.3.1.9 0.00000000000000000000000000000000000000000000000000000001158 212.0
DYD3_k127_4611615_7 Evidence 5 No homology to any previously reported sequences - - - 0.0000000000000000000000000000000000000000000000002599 192.0
DYD3_k127_4611615_8 Belongs to the peptidase S8 family K08651,K13274,K13276,K13277 - 3.4.21.66 0.00000000000000000000000002866 129.0
DYD3_k127_4611615_9 competence protein - - - 0.000000000000000000000431 113.0
DYD3_k127_4638404_0 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003375 523.0
DYD3_k127_4638404_1 Carbon-nitrogen hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003203 346.0
DYD3_k127_4638404_2 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.00000000000000000000000000000000000000004949 160.0
DYD3_k127_4656920_0 Acyl-CoA dehydrogenase, middle domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007951 327.0
DYD3_k127_4656920_1 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000003142 237.0
DYD3_k127_4656920_2 Probable molybdopterin binding domain - - - 0.000000000000000000000000000000000000000352 151.0
DYD3_k127_4656920_3 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03635,K21142 - 2.8.1.12 0.00000000000000000000000004821 117.0
DYD3_k127_4656920_4 - - - - 0.000009878 53.0
DYD3_k127_4698623_0 PFAM transferase hexapeptide repeat containing protein K00966 - 2.7.7.13 0.00000000000000000000000000000000000000000000000000000000000000001518 235.0
DYD3_k127_4701638_0 P-aminobenzoate N-oxygenase AurF - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007808 437.0
DYD3_k127_4701638_1 Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate molecules. Involved in purine salvage K00772 - 2.4.2.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003569 365.0
DYD3_k127_4701638_2 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002098 291.0
DYD3_k127_4701638_3 TIGRFAM UTP--glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.00000000000000000000000000000000000000000000000000001022 203.0
DYD3_k127_4701638_4 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP) K06153 - 3.6.1.27 0.0000000000000000000000000000000000000000000002725 179.0
DYD3_k127_4701638_5 phosphorelay sensor kinase activity - - - 0.0000000000000000000000000000000000000000006342 175.0
DYD3_k127_4701638_6 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 GO:0003674,GO:0003824,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0018130,GO:0019438,GO:0019752,GO:0022611,GO:0030272,GO:0032502,GO:0034641,GO:0035999,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0046653,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.3.2 0.00000000000000000000000000006405 125.0
DYD3_k127_4701638_7 Putative regulatory protein - - - 0.000000000000000000000005928 105.0
DYD3_k127_4701638_8 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000023 102.0
DYD3_k127_4823318_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 2.7.7.8 3.842e-258 819.0
DYD3_k127_4823318_1 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005109 572.0
DYD3_k127_4823318_2 Insulinase (Peptidase family M16) - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002908 442.0
DYD3_k127_4823318_3 DHH family K06881 GO:0008150,GO:0040007 3.1.13.3,3.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005639 301.0
DYD3_k127_4823318_4 Riboflavin kinase K11753 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006139,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006771,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008531,GO:0009058,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009124,GO:0009156,GO:0009161,GO:0009165,GO:0009231,GO:0009259,GO:0009260,GO:0009398,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019866,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0034641,GO:0034654,GO:0042364,GO:0042726,GO:0042727,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046390,GO:0046444,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000672 278.0
DYD3_k127_4823318_5 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016020,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0030312,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0048037,GO:0050661,GO:0050662,GO:0051287,GO:0055114,GO:0070402,GO:0070404,GO:0071704,GO:0071944,GO:0097159,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.17.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000714 262.0
DYD3_k127_4823318_6 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0030312,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.0000000000000000000000000000000000000000000000000000000000000000000000008364 256.0
DYD3_k127_4823318_7 NHL repeat - - - 0.000000000000000000000000000000000000000000000000001117 201.0
DYD3_k127_4823318_8 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0015935,GO:0016020,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071944,GO:1990904 - 0.000000000000000000000000000000153 125.0
DYD3_k127_4823318_9 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000000000000000897 105.0
DYD3_k127_4834758_0 Belongs to the CarB family K01955 GO:0000050,GO:0003674,GO:0003824,GO:0004087,GO:0004088,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016020,GO:0016053,GO:0016874,GO:0016879,GO:0016884,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.5.5 0.0 1135.0
DYD3_k127_4834758_1 TIGRFAM carbamoyl-phosphate synthase, small subunit K01956 - 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008656 429.0
DYD3_k127_48594_0 Domain of unknown function (DUF2088) - - - 1.607e-228 726.0
DYD3_k127_48594_1 peptidase activity, acting on L-amino acid peptides K13735,K20276,K21449 - - 2.305e-214 710.0
DYD3_k127_48594_10 ABC-type branched-chain amino acid transport systems, periplasmic component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003818 296.0
DYD3_k127_48594_11 - - - - 0.000000000000000000000000000000000000000000000000000000000048 225.0
DYD3_k127_48594_12 - - - - 0.000000000000000521 88.0
DYD3_k127_48594_13 Bacterial-like globin K06886 - - 0.000000000000001261 79.0
DYD3_k127_48594_14 YcdC-like protein, C-terminal region K09017 - - 0.000000002207 68.0
DYD3_k127_48594_2 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 8.731e-194 622.0
DYD3_k127_48594_3 Alcohol dehydrogenase GroES-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002849 461.0
DYD3_k127_48594_4 HAD-superfamily subfamily IB hydrolase, TIGR01490 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 410.0
DYD3_k127_48594_5 pfam abc K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002098 355.0
DYD3_k127_48594_6 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001557 359.0
DYD3_k127_48594_7 ATPases associated with a variety of cellular activities K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007314 338.0
DYD3_k127_48594_8 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004154 304.0
DYD3_k127_48594_9 Phosphate acyltransferases K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005281 313.0
DYD3_k127_4867634_0 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003875 505.0
DYD3_k127_4867634_1 Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate K00451 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0055114 1.13.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001984 322.0
DYD3_k127_4867634_2 Domain of unknown function DUF11 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005043 292.0
DYD3_k127_4867634_3 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0040007,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000003429 263.0
DYD3_k127_487934_0 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008765,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004317 461.0
DYD3_k127_487934_1 Penicillin-binding protein, dimerisation domain K03587 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004214 402.0
DYD3_k127_487934_2 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 GO:0008150,GO:0040007 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006194 385.0
DYD3_k127_487934_3 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 346.0
DYD3_k127_487934_4 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0040007,GO:0044424,GO:0044444,GO:0044464 6.3.2.9 0.000000000000000000000000000000000000000002943 175.0
DYD3_k127_4880437_0 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006669 316.0
DYD3_k127_4880437_1 PFAM ABC transporter related K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002722 302.0
DYD3_k127_4880437_2 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005241 301.0
DYD3_k127_4880437_3 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001234 282.0
DYD3_k127_4880437_4 amino acid transport K02029,K02030 - - 0.00000000000000000000000000000000000000000000006494 181.0
DYD3_k127_5005040_0 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.0 1194.0
DYD3_k127_5005040_1 Zinc metalloprotease (Elastase) K01399,K08604 - 3.4.24.25,3.4.24.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003876 478.0
DYD3_k127_5005040_10 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000000003763 82.0
DYD3_k127_5005040_11 Zinc carboxypeptidase - - - 0.000000000008581 76.0
DYD3_k127_5005040_2 TIGRFAM daunorubicin resistance ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003051 362.0
DYD3_k127_5005040_3 Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety K00453 GO:0003674,GO:0003824,GO:0004833,GO:0005488,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016043,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019441,GO:0019752,GO:0020037,GO:0022607,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043436,GO:0043933,GO:0044085,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046906,GO:0048037,GO:0051213,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0070189,GO:0071704,GO:0071840,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.13.11.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007969 302.0
DYD3_k127_5005040_4 3-oxo-5-alpha-steroid 4-dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001474 293.0
DYD3_k127_5005040_5 Transport permease protein K01992,K18233 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008569 288.0
DYD3_k127_5005040_6 Conserved Protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004563 294.0
DYD3_k127_5005040_7 Belongs to the ompA family K20276 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003613 284.0
DYD3_k127_5005040_8 integral membrane protein - - - 0.00000000000000000000000000000000000000000007133 178.0
DYD3_k127_5005040_9 Glycogen debranching enzyme - - - 0.0000000000000000000008004 112.0
DYD3_k127_5027325_0 Belongs to the GPI family K01810,K13810 - 2.2.1.2,5.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002089 402.0
DYD3_k127_5027325_1 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00529 - 1.18.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001777 355.0
DYD3_k127_5027325_10 Pyridoxamine 5'-phosphate oxidase - - - 0.0000000000000000000000000000000000000000002964 179.0
DYD3_k127_5027325_11 Class II Aldolase and Adducin N-terminal domain K08967 - 1.13.11.53,1.13.11.54 0.0000000000000000000000000000000000000001151 158.0
DYD3_k127_5027325_12 PAS fold K07636 - 2.7.13.3 0.0000000000000000000000000000000000001336 162.0
DYD3_k127_5027325_14 Peptidyl-prolyl cis-trans isomerase K01802 - 5.2.1.8 0.0000000000000000000000000000002656 140.0
DYD3_k127_5027325_15 peptide chain release factor K15034 - - 0.00000000000000000000000000001883 122.0
DYD3_k127_5027325_16 PFAM response regulator receiver K02483,K07658,K07668 - - 0.0000000000000000000000000001376 120.0
DYD3_k127_5027325_17 Copper binding proteins, plastocyanin/azurin family - - - 0.00000000000000000244 91.0
DYD3_k127_5027325_18 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE)-like - - - 0.000000000000000004305 98.0
DYD3_k127_5027325_19 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000006612 86.0
DYD3_k127_5027325_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008501 324.0
DYD3_k127_5027325_20 PFAM L,D-transpeptidase catalytic domain - - - 0.0000000000000002326 87.0
DYD3_k127_5027325_21 Bacterial transferase hexapeptide (six repeats) - - - 0.00002868 47.0
DYD3_k127_5027325_22 Cupin domain - - - 0.0003029 50.0
DYD3_k127_5027325_23 Peptidase family M23 - - - 0.0005626 51.0
DYD3_k127_5027325_3 Short-chain alcohol dehydrogenase K16066 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.1.1.381 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004339 321.0
DYD3_k127_5027325_4 Electron transfer flavoprotein K03522 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003039 269.0
DYD3_k127_5027325_5 Electron transfer flavoprotein domain K03521 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007563 249.0
DYD3_k127_5027325_6 Oxidoreductase molybdopterin binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000001675 240.0
DYD3_k127_5027325_7 May play a role in the intracellular transport of hydrophobic ligands - - - 0.000000000000000000000000000000000000000000000000000001722 195.0
DYD3_k127_5027325_8 Pfam Wyosine base formation - - - 0.0000000000000000000000000000000000000000000000006016 185.0
DYD3_k127_5027325_9 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000004934 182.0
DYD3_k127_5066823_0 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007745 291.0
DYD3_k127_5066823_1 Galactose oxidase, central domain K08282 - 2.7.11.1 0.000000000000000000000000000000000000002539 154.0
DYD3_k127_5073402_0 Heavy-metal-associated domain K17686 - 3.6.3.54 3.814e-208 671.0
DYD3_k127_5073402_1 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 - 2.7.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 562.0
DYD3_k127_5073402_10 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000004963 164.0
DYD3_k127_5073402_11 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000000000000005671 153.0
DYD3_k127_5073402_12 phosphatase activity K07025 - - 0.0000000000000000000000005535 117.0
DYD3_k127_5073402_13 endonuclease exonuclease phosphatase - - - 0.000000000000000000004375 103.0
DYD3_k127_5073402_14 Heavy-metal-associated domain K07213 - - 0.000000000009902 69.0
DYD3_k127_5073402_15 negative regulation of translational initiation - - - 0.000000003314 64.0
DYD3_k127_5073402_2 CobW/HypB/UreG, nucleotide-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001954 549.0
DYD3_k127_5073402_3 PFAM LOR SDH bifunctional - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002913 460.0
DYD3_k127_5073402_4 Anion-transporting ATPase K01551 - 3.6.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005923 408.0
DYD3_k127_5073402_5 PFAM Phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005107 286.0
DYD3_k127_5073402_6 ROK family K00845 GO:0003674,GO:0003824,GO:0004340,GO:0004396,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019200,GO:0019637,GO:0044237,GO:0044238,GO:0044262,GO:0044424,GO:0044464,GO:0046835,GO:0051156,GO:0071704,GO:1901135 2.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007836 288.0
DYD3_k127_5073402_7 Belongs to the carbamate kinase family K00926 - 2.7.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000001167 249.0
DYD3_k127_5073402_8 Serine aminopeptidase, S33 K03928 - 3.1.1.1 0.00000000000000000000000000000000000000000000000000000000003048 227.0
DYD3_k127_5073402_9 translation release factor activity K03265 - - 0.00000000000000000000000000000000000000000008866 174.0
DYD3_k127_5135864_0 Cys/Met metabolism PLP-dependent enzyme K04127,K21174 - 5.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001411 315.0
DYD3_k127_5135864_1 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005959 263.0
DYD3_k127_5135864_2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000003412 241.0
DYD3_k127_5135864_3 - - - - 0.0000000000000000000000000000000000000000000000000000000006181 205.0
DYD3_k127_5135864_4 Neutral/alkaline non-lysosomal ceramidase, N-terminal - - - 0.000000000000000000000000000000000000000000000000000008788 212.0
DYD3_k127_5157405_0 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003264 536.0
DYD3_k127_5157405_1 Thioredoxin reductase K07222 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 430.0
DYD3_k127_5157405_10 Branched-chain amino acid ATP-binding cassette transporter K01995,K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000002731 239.0
DYD3_k127_5157405_11 PFAM ABC transporter related K01996 - - 0.0000000000000000000000000000000000000000000000000000000005771 211.0
DYD3_k127_5157405_12 Branched-chain amino acid ATP-binding cassette transporter K01995,K01998 - - 0.000000000000000000000000000000000000000000000002016 177.0
DYD3_k127_5157405_13 TIGRFAM degV family protein - - - 0.000000000000000000000000000000000000000000006536 178.0
DYD3_k127_5157405_14 Hydrolase of the alpha beta-hydrolase K07020 - - 0.00000000000000000000000000000000000000000007913 178.0
DYD3_k127_5157405_15 PFAM FGGY family of carbohydrate kinases, N-terminal domain K00854 - 2.7.1.17 0.00000000000000000000000000000000000000000901 173.0
DYD3_k127_5157405_16 Rhomboid family K19225 - 3.4.21.105 0.00000000000000000000000000000000001984 147.0
DYD3_k127_5157405_17 - - - - 0.0000000000000000000000000000001526 136.0
DYD3_k127_5157405_18 Methylase involved in ubiquinone menaquinone biosynthesis - - - 0.0000000000000000000000000001238 127.0
DYD3_k127_5157405_19 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000003652 110.0
DYD3_k127_5157405_2 Coenzyme A transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003561 429.0
DYD3_k127_5157405_20 PFAM Extracellular ligand-binding receptor K01999 - - 0.000000000000000000155 104.0
DYD3_k127_5157405_21 - - - - 0.0000000000002981 78.0
DYD3_k127_5157405_22 - - - - 0.000000004845 69.0
DYD3_k127_5157405_23 Tfp pilus assembly protein FimV - - - 0.0000000104 66.0
DYD3_k127_5157405_24 Thiamine pyrophosphate protein TPP binding domain protein K01652 - 2.2.1.6 0.000000567 61.0
DYD3_k127_5157405_25 - - - - 0.000127 52.0
DYD3_k127_5157405_3 FMN-dependent dehydrogenase K16422 - 1.1.3.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000218 376.0
DYD3_k127_5157405_4 Branched-chain amino acid transport system / permease component K01997,K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006261 353.0
DYD3_k127_5157405_5 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030312,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001435 331.0
DYD3_k127_5157405_6 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005393 295.0
DYD3_k127_5157405_7 Phenylacetate-CoA oxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001641 271.0
DYD3_k127_5157405_8 ATPases associated with a variety of cellular activities K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001235 266.0
DYD3_k127_5157405_9 Belongs to the aldehyde dehydrogenase family K00128,K00130 - 1.2.1.3,1.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000006642 269.0
DYD3_k127_5162142_0 peptidase M36 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006692 565.0
DYD3_k127_5162142_1 NlpC/P60 family - - - 0.00000000000000001833 96.0
DYD3_k127_5176538_0 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K03151 - 2.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 323.0
DYD3_k127_5176538_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001549 284.0
DYD3_k127_5198325_0 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 585.0
DYD3_k127_5198325_1 Stage II sporulation K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006013 284.0
DYD3_k127_5198325_2 MaoC like domain K18290 - 4.2.1.56 0.000000000000000000000000000000000000000000000000000000000000000000002731 242.0
DYD3_k127_5198325_3 family 18 - - - 0.000000000000000000000000000000000000000000000000000000000000000000006074 251.0
DYD3_k127_5198325_4 Glycosyl transferase family 2 K11936,K14666 - - 0.0000000000000000000000000000000000000000000000000001958 206.0
DYD3_k127_5198325_5 PAS domain - - - 0.00000000000000000000000000000000000009474 165.0
DYD3_k127_5198325_6 Sigma-70, region 4 K07685 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.0000004815 61.0
DYD3_k127_5235318_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 557.0
DYD3_k127_5235318_1 COG0025 NhaP-type Na H and K H - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000193 499.0
DYD3_k127_5235318_10 - - - - 0.000000548 58.0
DYD3_k127_5235318_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 411.0
DYD3_k127_5235318_3 Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007001 351.0
DYD3_k127_5235318_4 mechanosensitive ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000315 326.0
DYD3_k127_5235318_7 COG2940 Proteins containing SET domain K07117 - - 0.00000000000000000000000000000002548 132.0
DYD3_k127_5235318_8 PFAM Peptidase M23 K21471 - - 0.00000000000000000000000000001022 134.0
DYD3_k127_5235318_9 TIGRFAM 40-residue YVTN family beta-propeller repeat protein - - - 0.00000000000007141 85.0
DYD3_k127_5262164_0 Domain of unknown function (DUF4143) K07133 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001708 306.0
DYD3_k127_5262164_1 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.000000000000000000000000000000000000000000000000000000003094 226.0
DYD3_k127_5262164_3 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877 - 0.0000000000000000000000000000000799 127.0
DYD3_k127_5262164_4 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system - - - 0.000000000000000000000000001004 115.0
DYD3_k127_5262164_5 HNH nucleases - - - 0.00000000000000000000000522 108.0
DYD3_k127_5262164_6 - - - - 0.000000000003871 68.0
DYD3_k127_5262164_7 Carboxypeptidase regulatory-like domain - - - 0.000003858 59.0
DYD3_k127_5262164_8 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.0005231 44.0
DYD3_k127_5314198_0 Uncharacterised protein family (UPF0182) K09118 GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 3.274e-220 715.0
DYD3_k127_5314198_1 PFAM Glycoside hydrolase, family 38 K01191,K15524 - 3.2.1.170,3.2.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005866 567.0
DYD3_k127_5314198_10 Belongs to the peptidase S16 family K07177 - - 0.0000000000000000000000000000000000000000624 168.0
DYD3_k127_5314198_11 PFAM Stage II sporulation protein K06381 - - 0.00000000000000000000000000000000554 146.0
DYD3_k127_5314198_12 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA - - - 0.00000000000000000000000000000471 130.0
DYD3_k127_5314198_13 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K05606 - 5.1.99.1 0.000000000000000000000007231 111.0
DYD3_k127_5314198_14 D-alanyl-D-alanine carboxypeptidase - - - 0.0000000000000000000000158 113.0
DYD3_k127_5314198_15 CBS domain - - - 0.00000000000000000005663 95.0
DYD3_k127_5314198_16 DUF72 domain containing protein - - - 0.00000000000002569 85.0
DYD3_k127_5314198_17 - - - - 0.00000003585 59.0
DYD3_k127_5314198_2 Type II/IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004384 391.0
DYD3_k127_5314198_3 mannose-ethanolamine phosphotransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004546 390.0
DYD3_k127_5314198_4 Cell shape determining protein MreB Mrl K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002391 308.0
DYD3_k127_5314198_5 Enoyl-CoA hydratase/isomerase K01692 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000005185 272.0
DYD3_k127_5314198_6 Belongs to the peptidase S8 family K14743 - - 0.0000000000000000000000000000000000000000000000000000000007701 229.0
DYD3_k127_5314198_7 Zincin-like metallopeptidase - - - 0.000000000000000000000000000000000000000000001891 180.0
DYD3_k127_5314198_8 metal-dependent hydrolase K07043 - - 0.00000000000000000000000000000000000000000002258 169.0
DYD3_k127_5314198_9 Histidine kinase K07636 - 2.7.13.3 0.00000000000000000000000000000000000000005723 175.0
DYD3_k127_5323529_0 ABC1 family K03688 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008798 491.0
DYD3_k127_5323529_1 Belongs to the TPP enzyme family K01576 - 4.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002489 394.0
DYD3_k127_5323529_10 Phenazine biosynthesis PhzC PhzF protein K06998 - 5.3.3.17 0.0000000000000000000000000000000000000005488 159.0
DYD3_k127_5323529_11 Interacts with the core proteasome alpha-subunit (PrcA) through its C-terminal hydrophobic-tyrosine-X motif (HbYX motif). Interaction of Bpa with the proteasome stimulates proteosomal peptidase and casein degradation activity, which suggests Bpa could play a role in the removal of non-native or damaged proteins by influencing the conformation of the proteasome complex upon interaction - GO:0000502,GO:0003674,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0008150,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010604,GO:0016020,GO:0016043,GO:0019222,GO:0022607,GO:0022624,GO:0030162,GO:0030312,GO:0031323,GO:0031325,GO:0031329,GO:0031331,GO:0032268,GO:0032270,GO:0032991,GO:0042176,GO:0043933,GO:0044085,GO:0044424,GO:0044464,GO:0044877,GO:0045732,GO:0045862,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051259,GO:0051260,GO:0060255,GO:0061136,GO:0065003,GO:0065007,GO:0070628,GO:0071840,GO:0071944,GO:0080090,GO:1901800,GO:1902494,GO:1903050,GO:1903052,GO:1903362,GO:1903364,GO:1905368,GO:1905369 - 0.000000000000000000000000000000000000001905 154.0
DYD3_k127_5323529_12 Domain of unknown function DUF11 - - - 0.0000000000000000000000000000000000009536 163.0
DYD3_k127_5323529_14 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000004393 134.0
DYD3_k127_5323529_16 Serine aminopeptidase, S33 - - - 0.00000000000000000000009645 111.0
DYD3_k127_5323529_17 peptidase inhibitor activity - - - 0.0000000000000000000003538 107.0
DYD3_k127_5323529_18 - - - - 0.0000000000000000005016 102.0
DYD3_k127_5323529_19 ABC1 family K03688 - - 0.00000000000000005443 93.0
DYD3_k127_5323529_2 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000343 397.0
DYD3_k127_5323529_20 PFAM peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.0000000000000001439 96.0
DYD3_k127_5323529_21 CDP-alcohol phosphatidyltransferase K00995,K00999 GO:0003674,GO:0003824,GO:0003881,GO:0003882,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016740,GO:0016772,GO:0016780,GO:0017169,GO:0019637,GO:0030312,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044464,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0071944,GO:0090407,GO:1901576 2.7.8.11,2.7.8.5 0.0000000000000006216 85.0
DYD3_k127_5323529_22 Helix-turn-helix XRE-family like proteins - - - 0.000000000000003387 88.0
DYD3_k127_5323529_24 Acetyltransferase (GNAT) family - - - 0.000000000000782 74.0
DYD3_k127_5323529_25 MDMPI C-terminal domain - - - 0.000000000003511 77.0
DYD3_k127_5323529_26 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000003168 72.0
DYD3_k127_5323529_28 protein, possibly involved in aromatic compounds catabolism - - - 0.0000000106 68.0
DYD3_k127_5323529_29 Belongs to the eIF-2B alpha beta delta subunits family K03680 - - 0.0000003811 61.0
DYD3_k127_5323529_3 ABC transporter K06147 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008664 359.0
DYD3_k127_5323529_30 Acetyltransferase (GNAT) domain - - - 0.0001086 51.0
DYD3_k127_5323529_4 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004615 336.0
DYD3_k127_5323529_5 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000409 271.0
DYD3_k127_5323529_6 Major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000435 238.0
DYD3_k127_5323529_7 PFAM molybdopterin binding domain K03742 - 3.5.1.42 0.000000000000000000000000000000000000000000000000000000007836 213.0
DYD3_k127_5323529_8 transport, permease protein K01992 - - 0.00000000000000000000000000000000000000000000001848 181.0
DYD3_k127_5323529_9 PFAM GGDEF domain containing protein - - - 0.0000000000000000000000000000000000000000000009637 186.0
DYD3_k127_5326822_0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 - 1.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002124 472.0
DYD3_k127_5326822_1 The glycine cleavage system catalyzes the degradation of glycine K00605 GO:0005575,GO:0005618,GO:0005623,GO:0008150,GO:0030312,GO:0040007,GO:0044464,GO:0071944 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 306.0
DYD3_k127_5326822_2 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016740,GO:0016782,GO:0016783,GO:0016992,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0070283,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000003747 206.0
DYD3_k127_5326822_3 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.00000000000000000000000000000000000000000000000000000002176 204.0
DYD3_k127_5333532_0 Belongs to the peptidase S8 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002451 531.0
DYD3_k127_5333532_1 hydrolase activity, acting on ester bonds K01563 - 3.8.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001862 454.0
DYD3_k127_5333532_10 Kelch motif - - - 0.0000000000000000000000000000000009254 146.0
DYD3_k127_5333532_11 - - - - 0.0000000000000000000000000000003074 143.0
DYD3_k127_5333532_12 PQQ enzyme repeat K05889,K12132 - 1.1.2.6,2.7.11.1 0.00000000000000005546 95.0
DYD3_k127_5333532_13 HNH nucleases - GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.00000002956 66.0
DYD3_k127_5333532_2 Protein of unknown function (DUF1298) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006092 413.0
DYD3_k127_5333532_3 Alpha beta - - - 0.0000000000000000000000000000000000000000000000000000000000000000003759 244.0
DYD3_k127_5333532_4 acyl esterases K06978 - - 0.000000000000000000000000000000000000000000000000000000000000000004368 250.0
DYD3_k127_5333532_5 Nitroreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000001186 250.0
DYD3_k127_5333532_6 acyl esterases K06978 - - 0.00000000000000000000000000000000000000000000000000000001069 221.0
DYD3_k127_5333532_7 Scramblase - - - 0.000000000000000000000000000000000000000000000000000001511 197.0
DYD3_k127_5333532_8 - - - - 0.000000000000000000000000000000000000000000000004735 188.0
DYD3_k127_5333532_9 Belongs to the ompA family K20276 - - 0.000000000000000000000000000000000004285 158.0
DYD3_k127_5363538_0 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.0000000000000000000000000000000000000000000006662 170.0
DYD3_k127_5363538_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000001197 110.0
DYD3_k127_5363538_2 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.00000000000000000001273 104.0
DYD3_k127_5363538_4 PFAM blue (type 1) copper domain protein - - - 0.00000000000000002562 95.0
DYD3_k127_5364177_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001451 491.0
DYD3_k127_5364177_1 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K13019 - 5.1.3.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002564 417.0
DYD3_k127_5364177_10 Subtilase family K14743 - - 0.0000002443 64.0
DYD3_k127_5364177_2 Polysaccharide biosynthesis protein K01711,K15856 - 1.1.1.281,4.2.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001682 397.0
DYD3_k127_5364177_3 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02472,K13015 - 1.1.1.136,1.1.1.336 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002 362.0
DYD3_k127_5364177_4 Glycosyl transferase 4-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005096 256.0
DYD3_k127_5364177_5 PFAM Stage II sporulation D domain protein - - - 0.000000000000000000000000000000000000000000000000000000000001298 239.0
DYD3_k127_5364177_6 Bacterial transferase hexapeptide repeat protein - - - 0.00000000000000000000000000000000000000000000000000000045 206.0
DYD3_k127_5364177_7 Pro-kumamolisin, activation domain K05999 - 3.4.21.101 0.000000000000000000003841 97.0
DYD3_k127_5364177_8 Subtilase family K14743 - - 0.00000000000008716 85.0
DYD3_k127_5364177_9 UDP-N-acetylglucosamine 2-epimerase K01791 - 5.1.3.14 0.000000006897 68.0
DYD3_k127_5385758_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 2.279e-237 745.0
DYD3_k127_5385758_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944 3.6.3.14 8.138e-218 691.0
DYD3_k127_5385758_10 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 413.0
DYD3_k127_5385758_11 Catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002166 385.0
DYD3_k127_5385758_12 Starch synthase catalytic domain K16150 GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016740,GO:0016757,GO:0033692,GO:0034637,GO:0034645,GO:0040007,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.4.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008342 366.0
DYD3_k127_5385758_13 LAO AO transport system ATPase K07588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023 359.0
DYD3_k127_5385758_14 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003288 346.0
DYD3_k127_5385758_15 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007716 341.0
DYD3_k127_5385758_16 Catalyzes the formation of cyclic 2,3-diphosphoglycerate (cDPG) by formation of an intramolecular phosphoanhydride bond at the expense of ATP K05716 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004766 322.0
DYD3_k127_5385758_17 Enoyl-CoA hydratase/isomerase K01692 GO:0003674,GO:0003824,GO:0004300,GO:0005575,GO:0005623,GO:0005886,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0016020,GO:0016042,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0019395,GO:0019752,GO:0030258,GO:0032787,GO:0034440,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044464,GO:0046395,GO:0055114,GO:0071704,GO:0071944,GO:0072329,GO:1901575 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005098 308.0
DYD3_k127_5385758_18 acid phosphatase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007345 301.0
DYD3_k127_5385758_19 Methionine biosynthesis protein MetW - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002789 300.0
DYD3_k127_5385758_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 3.6.3.14 5.465e-215 692.0
DYD3_k127_5385758_20 Psort location CytoplasmicMembrane, score 10.00 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008636 286.0
DYD3_k127_5385758_21 PFAM Glycosyl transferase family 4 K02851 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0016043,GO:0016740,GO:0016772,GO:0016780,GO:0030145,GO:0034645,GO:0042546,GO:0043167,GO:0043169,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044464,GO:0045229,GO:0046872,GO:0046914,GO:0070589,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071944,GO:1901576 2.7.8.33,2.7.8.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000165 275.0
DYD3_k127_5385758_22 Glycosyl hydrolase family 57 K16149 GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944 2.4.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000007503 277.0
DYD3_k127_5385758_23 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000003337 262.0
DYD3_k127_5385758_24 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000003337 255.0
DYD3_k127_5385758_25 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001986 246.0
DYD3_k127_5385758_26 Bacterial transferase hexapeptide (six repeats) K00661 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 2.3.1.79 0.00000000000000000000000000000000000000000000000000000000000000000782 235.0
DYD3_k127_5385758_27 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.0000000000000000000000000000000000000000000000000000000000002192 226.0
DYD3_k127_5385758_28 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464 2.1.1.297 0.00000000000000000000000000000000000000000000000000000000001354 217.0
DYD3_k127_5385758_29 2-phosphoglycerate kinase K05715 - - 0.00000000000000000000000000000000000000000000000000000000001429 222.0
DYD3_k127_5385758_3 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0000287,GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016874,GO:0016886,GO:0030312,GO:0033554,GO:0034641,GO:0040007,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0071944,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 7.015e-214 683.0
DYD3_k127_5385758_30 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 GO:0008150,GO:0040007 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000003977 215.0
DYD3_k127_5385758_31 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. - - - 0.000000000000000000000000000000000000000000000000000000003616 224.0
DYD3_k127_5385758_32 3-demethylubiquinone-9 3-O-methyltransferase activity K00568 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016020,GO:0016740,GO:0016741,GO:0032259,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 2.1.1.222,2.1.1.64 0.0000000000000000000000000000000000000000000000000000001375 204.0
DYD3_k127_5385758_33 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004413,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006555,GO:0006566,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009088,GO:0009092,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019202,GO:0019752,GO:0040007,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.1.39 0.000000000000000000000000000000000000000000000000000003088 201.0
DYD3_k127_5385758_34 Reversible hydration of carbon dioxide K01673 GO:0003674,GO:0003824,GO:0004089,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008270,GO:0016020,GO:0016829,GO:0016835,GO:0016836,GO:0040007,GO:0043167,GO:0043169,GO:0044464,GO:0046872,GO:0046914,GO:0071944 4.2.1.1 0.0000000000000000000000000000000000000000000005199 181.0
DYD3_k127_5385758_35 Belongs to the SUA5 family K07566 GO:0000049,GO:0002949,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006450,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0034470,GO:0034641,GO:0034660,GO:0040007,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0065007,GO:0065008,GO:0070525,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 2.7.7.87 0.0000000000000000000000000000000000000000000009087 180.0
DYD3_k127_5385758_36 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000001329 168.0
DYD3_k127_5385758_37 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000008565 163.0
DYD3_k127_5385758_38 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000000000000000000000000000000000000002711 159.0
DYD3_k127_5385758_39 Sterol carrier protein - - - 0.0000000000000000000000000000000000001413 145.0
DYD3_k127_5385758_4 N-terminal domain of (some) glycogen debranching enzymes - - - 3.468e-206 664.0
DYD3_k127_5385758_40 AMP-binding enzyme - - - 0.000000000000000000000000000000000001803 155.0
DYD3_k127_5385758_41 sugar-phosphate isomerases, RpiB LacA LacB family K01808 - 5.3.1.6 0.000000000000000000000000000000000002078 156.0
DYD3_k127_5385758_42 Peptidase S8 and S53 subtilisin kexin sedolisin K13274,K14645 - - 0.0000000000000000000000000000000002122 153.0
DYD3_k127_5385758_43 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000001938 143.0
DYD3_k127_5385758_44 PFAM NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.00000000000000000000000000000003231 134.0
DYD3_k127_5385758_45 Binds the 23S rRNA K02909 - - 0.0000000000000000000000000001447 119.0
DYD3_k127_5385758_46 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000000000000000000000000005043 119.0
DYD3_k127_5385758_47 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 6.3.5.6,6.3.5.7 0.000000000000000000000004299 104.0
DYD3_k127_5385758_48 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.00000000000000000002775 93.0
DYD3_k127_5385758_49 Toxic component of a toxin-antitoxin (TA) module K07171 GO:0008150,GO:0040008,GO:0045926,GO:0048519,GO:0050789,GO:0065007 - 0.000000000000000004483 87.0
DYD3_k127_5385758_5 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 GO:0003674,GO:0003824,GO:0004795,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006566,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009088,GO:0009987,GO:0016020,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668 504.0
DYD3_k127_5385758_50 protease K07052 - - 0.00000000000006001 81.0
DYD3_k127_5385758_51 HNH endonuclease - - - 0.0000000000005042 76.0
DYD3_k127_5385758_52 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000715 76.0
DYD3_k127_5385758_53 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter - - - 0.000000007705 61.0
DYD3_k127_5385758_55 BNR repeat-like domain - - - 0.00005225 56.0
DYD3_k127_5385758_56 CAAX protease self-immunity K07052 - - 0.0008753 49.0
DYD3_k127_5385758_6 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 501.0
DYD3_k127_5385758_7 Belongs to the EPSP synthase family. MurA subfamily K00790 GO:0008150,GO:0040007 2.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003813 468.0
DYD3_k127_5385758_8 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005591 473.0
DYD3_k127_5385758_9 Homoserine dehydrogenase K00003,K12524 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944 1.1.1.3,2.7.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002868 461.0
DYD3_k127_5458031_0 Helix-turn-helix domain - - - 0.0000000001739 69.0
DYD3_k127_5461255_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.0 1122.0
DYD3_k127_5461255_1 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 GO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.5 0.0 1069.0
DYD3_k127_5461255_10 Responsible for synthesis of pseudouridine from uracil K06180 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000439 241.0
DYD3_k127_5461255_11 Transcriptional regulatory protein, C terminal K07776 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009405,GO:0009889,GO:0010468,GO:0010556,GO:0010565,GO:0019216,GO:0019217,GO:0019219,GO:0019220,GO:0019222,GO:0031323,GO:0031326,GO:0044419,GO:0048583,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051252,GO:0051704,GO:0060255,GO:0062012,GO:0065007,GO:0080090,GO:0080134,GO:0097159,GO:1901363,GO:1902882,GO:1903506,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000003329 232.0
DYD3_k127_5461255_12 Belongs to the TrpC family K01609 GO:0000162,GO:0000287,GO:0003674,GO:0003824,GO:0004425,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016020,GO:0016053,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0030312,GO:0034641,GO:0040007,GO:0042401,GO:0042430,GO:0042435,GO:0043167,GO:0043169,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046219,GO:0046391,GO:0046394,GO:0046483,GO:0046872,GO:0071704,GO:0071944,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.1.1.48 0.00000000000000000000000000000000000000000000000000000000891 211.0
DYD3_k127_5461255_13 His Kinase A (phosphoacceptor) domain K07642 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000194 212.0
DYD3_k127_5461255_14 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000001964 196.0
DYD3_k127_5461255_15 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.0000000000000000000000000000000000000000000000006547 190.0
DYD3_k127_5461255_16 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.00000000000000000000000000000000000000000000007944 180.0
DYD3_k127_5461255_17 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496,K11755 - 3.5.4.19,3.6.1.31 0.0000000000000000000000000000000000000000000001281 169.0
DYD3_k127_5461255_18 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.000000000000000000000000000000000000000000001297 183.0
DYD3_k127_5461255_19 ribonuclease activity - - - 0.00000000000000000000000000000000001394 143.0
DYD3_k127_5461255_2 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 GO:0000162,GO:0003674,GO:0003824,GO:0004834,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0040007,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008107 564.0
DYD3_k127_5461255_20 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 GO:0006464,GO:0006497,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009405,GO:0009987,GO:0019538,GO:0034645,GO:0036211,GO:0040007,GO:0042157,GO:0042158,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044419,GO:0051704,GO:0071704,GO:1901564,GO:1901566,GO:1901576 3.4.23.36 0.0000000000000000000000000000000004661 141.0
DYD3_k127_5461255_21 Belongs to the peptidase S8 family - - - 0.00000000000000000000000000000002225 145.0
DYD3_k127_5461255_22 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944 4.2.1.20 0.0000000000000000000000000000007998 128.0
DYD3_k127_5461255_23 PD-(D/E)XK nuclease superfamily K03657 - 3.6.4.12 0.000000000000000000000000000006312 133.0
DYD3_k127_5461255_24 Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA K09772 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000002821 115.0
DYD3_k127_5461255_25 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.00000000000000000000005446 109.0
DYD3_k127_5461255_26 toxin-antitoxin pair type II binding - - - 0.00000000000000002959 84.0
DYD3_k127_5461255_27 metallopeptidase activity - - - 0.0000000001166 72.0
DYD3_k127_5461255_28 PFAM DivIVA family protein K04074 - - 0.000000006405 67.0
DYD3_k127_5461255_29 integral membrane protein K02221 - - 0.000000294 55.0
DYD3_k127_5461255_3 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657,K01665 - 2.6.1.85,4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005199 499.0
DYD3_k127_5461255_30 - - - - 0.000004913 56.0
DYD3_k127_5461255_31 response regulator - - - 0.00000745 54.0
DYD3_k127_5461255_32 Belongs to the UPF0235 family K09131 - - 0.00001016 52.0
DYD3_k127_5461255_33 - - - - 0.0006326 49.0
DYD3_k127_5461255_4 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 GO:0000166,GO:0000287,GO:0000910,GO:0000921,GO:0000935,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006996,GO:0007010,GO:0007049,GO:0008150,GO:0009987,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0022402,GO:0022607,GO:0030428,GO:0031106,GO:0032153,GO:0032155,GO:0032185,GO:0032506,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034622,GO:0035639,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043169,GO:0043933,GO:0044085,GO:0044424,GO:0044464,GO:0045787,GO:0046872,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051258,GO:0051301,GO:0051726,GO:0065003,GO:0065007,GO:0070925,GO:0071840,GO:0071944,GO:0090529,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005629 481.0
DYD3_k127_5461255_5 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003894 339.0
DYD3_k127_5461255_6 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K01663,K02500 GO:0000105,GO:0000107,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009382,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0032991,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494,GO:1990234 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 320.0
DYD3_k127_5461255_7 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006912 306.0
DYD3_k127_5461255_8 Histidine biosynthesis protein K01814,K01817 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0040007,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16,5.3.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000002686 256.0
DYD3_k127_5461255_9 Imidazoleglycerol-phosphate dehydratase K01089,K01693 GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0040007,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.1.3.15,4.2.1.19 0.0000000000000000000000000000000000000000000000000000000000000000001139 235.0
DYD3_k127_5469482_0 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 316.0
DYD3_k127_5469482_1 NAD(P)H-binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002432 298.0
DYD3_k127_5469482_2 major facilitator superfamily - - - 0.0000000000000000000000000000000000000000006106 172.0
DYD3_k127_5469482_3 tRNA (adenine(22)-N(1))-methyltransferase K06967 - 2.1.1.217 0.000000000000000000000000000000000000001964 152.0
DYD3_k127_5469482_4 C4-type zinc ribbon domain K07164 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944 - 0.0000000000000000000000000000007995 130.0
DYD3_k127_5469482_5 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000003396 119.0
DYD3_k127_5469482_6 PFAM Activator of Hsp90 ATPase 1 family protein - - - 0.00000000000000000000000000007787 126.0
DYD3_k127_5488567_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1089.0
DYD3_k127_5488567_1 Heat shock 70 kDa protein K04043 - - 4.355e-262 820.0
DYD3_k127_5488567_10 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686,K05516 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0010468,GO:0016020,GO:0019222,GO:0030312,GO:0040007,GO:0043388,GO:0044093,GO:0044464,GO:0050789,GO:0051098,GO:0051099,GO:0051101,GO:0060255,GO:0065007,GO:0065009,GO:0071944,GO:2000677,GO:2000679 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 349.0
DYD3_k127_5488567_11 Putative peptidoglycan binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002695 299.0
DYD3_k127_5488567_12 HD domain K07814 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008435 303.0
DYD3_k127_5488567_13 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.3.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000001198 269.0
DYD3_k127_5488567_14 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 GO:0008150,GO:0040007 5.4.99.18 0.00000000000000000000000000000000000000000001702 170.0
DYD3_k127_5488567_15 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000000001843 169.0
DYD3_k127_5488567_16 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000009421 141.0
DYD3_k127_5488567_17 ACT domain K03567 - - 0.00000000000000000000000000000665 130.0
DYD3_k127_5488567_18 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.00000000000000000000000000124 123.0
DYD3_k127_5488567_19 MerR HTH family regulatory protein K13640 GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.0000000000000000000000000279 113.0
DYD3_k127_5488567_2 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.5.3 1.28e-240 768.0
DYD3_k127_5488567_20 Belongs to the TPP enzyme family - - - 0.0000000000000000000000002432 119.0
DYD3_k127_5488567_21 - - - - 0.0000000000000000000000006455 115.0
DYD3_k127_5488567_22 protein possibly involved in aromatic compounds catabolism - - - 0.0000000000000000000000114 110.0
DYD3_k127_5488567_23 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000002207 96.0
DYD3_k127_5488567_24 Uncharacterized ACR, COG1430 K09005 - - 0.0000000000000000000401 99.0
DYD3_k127_5488567_25 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 GO:0008150,GO:0040007 2.4.2.14 0.000000000000000003118 84.0
DYD3_k127_5488567_26 Dodecin K09165 - - 0.0000000005243 66.0
DYD3_k127_5488567_3 Fe-S oxidoreductase - - - 2.966e-234 745.0
DYD3_k127_5488567_4 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0040007,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002093 567.0
DYD3_k127_5488567_5 Adenylosuccinate lyase C-terminus K01756 GO:0003674,GO:0003824,GO:0004018,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016829,GO:0016840,GO:0016842,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046033,GO:0046390,GO:0046483,GO:0055086,GO:0070626,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.3.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 483.0
DYD3_k127_5488567_6 Belongs to the GARS family K01945 - 6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001618 443.0
DYD3_k127_5488567_7 Fructose-bisphosphate aldolase class-I K01623 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008634 426.0
DYD3_k127_5488567_8 SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 353.0
DYD3_k127_5488567_9 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002833 366.0
DYD3_k127_5538923_0 PFAM AMP-dependent synthetase and ligase K00666 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001629 477.0
DYD3_k127_5538923_1 PFAM 3-Oxoacyl- acyl-carrier-protein (ACP) synthase III K00648 - 2.3.1.180 0.00000000000000000000000003526 113.0
DYD3_k127_5631827_0 Glycosyl transferase - - - 0.000000000000000000000000000000000000000000000001757 194.0
DYD3_k127_5631827_1 Belongs to the peptidase S8 family - - - 0.000000000008407 77.0
DYD3_k127_5631827_2 - - - - 0.00000000009534 65.0
DYD3_k127_5631827_4 Redoxin - - - 0.0000001192 57.0
DYD3_k127_5631827_5 sterol carrier protein - - - 0.0000005678 57.0
DYD3_k127_569556_0 Kef-type K transport systems K10716 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000382 256.0
DYD3_k127_569556_1 IMG reference gene - - - 0.0000000000000000000000000000000000000001021 176.0
DYD3_k127_569556_2 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944 4.2.1.20 0.00000000000000000000000000000000000003271 148.0
DYD3_k127_569556_3 Kelch motif - - - 0.000000000000002821 92.0
DYD3_k127_569556_4 Belongs to the peptidase S1B family - - - 0.000000001987 72.0
DYD3_k127_569556_6 LVIVD repeat - - - 0.00002989 57.0
DYD3_k127_5703053_0 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 1.327e-264 824.0
DYD3_k127_5703053_1 cellulose binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002782 545.0
DYD3_k127_5703053_10 alginic acid biosynthetic process K20276 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001933 255.0
DYD3_k127_5703053_11 PFAM helix-turn-helix HxlR type - - - 0.000000000000000000000000000000000000000000000000000471 192.0
DYD3_k127_5703053_12 Arginase family K01479,K01480 - 3.5.3.11,3.5.3.8 0.0000000000000000000000000000000000000000000000008686 186.0
DYD3_k127_5703053_13 o-methyltransferase K21377 - 2.1.1.302 0.000000000000000000000000000000000000000000000003389 186.0
DYD3_k127_5703053_14 NifU-like N terminal domain K04488 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006807,GO:0006873,GO:0006875,GO:0006879,GO:0008150,GO:0008152,GO:0008198,GO:0009987,GO:0010467,GO:0016740,GO:0016782,GO:0019538,GO:0019725,GO:0030003,GO:0036455,GO:0042592,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0044424,GO:0044464,GO:0046872,GO:0046914,GO:0046916,GO:0048037,GO:0048878,GO:0050801,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0051604,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0071704,GO:0097428,GO:0098771,GO:1901564 - 0.000000000000000000000000000000000000000000004301 167.0
DYD3_k127_5703053_15 PFAM ABC transporter related K09013 - - 0.0000000000000000000000000000000000000000005723 169.0
DYD3_k127_5703053_16 Iron-sulphur cluster biosynthesis K13628 GO:0003674,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0016226,GO:0019538,GO:0022607,GO:0031163,GO:0043167,GO:0043169,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0048037,GO:0051186,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0051604,GO:0071704,GO:0071840,GO:0071944,GO:1901564 - 0.0000000000000000000000000000000000002638 149.0
DYD3_k127_5703053_17 YbaK prolyl-tRNA synthetase associated region - - - 0.000000000000000000000000000001698 134.0
DYD3_k127_5703053_18 WD40-like Beta Propeller Repeat K03641 - - 0.00000000000000000000000000003064 130.0
DYD3_k127_5703053_19 Protein of unknown function (DUF4242) - - - 0.00000000000000000000000000004411 118.0
DYD3_k127_5703053_2 FeS assembly protein SufB K07033,K09014 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0034641,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002189 536.0
DYD3_k127_5703053_20 Rieske 2Fe-2S K05710 - - 0.0000000000000000000000000001643 118.0
DYD3_k127_5703053_21 Pfam:DUF59 - - - 0.0000000000000000000000006995 107.0
DYD3_k127_5703053_22 belongs to the sigma-70 factor family, ECF subfamily K03088 - - 0.0000000000384 72.0
DYD3_k127_5703053_23 PFAM Uncharacterised protein family UPF0150 - - - 0.000000001625 70.0
DYD3_k127_5703053_24 pathogenesis K01390,K08643,K21471,K21687 GO:0005575,GO:0005618,GO:0005623,GO:0016020,GO:0030312,GO:0044464,GO:0071944 3.4.24.13 0.000000005265 68.0
DYD3_k127_5703053_25 Sigma-70, region 4 K03088 - - 0.00000004518 64.0
DYD3_k127_5703053_26 Leishmanolysin - - - 0.000002841 56.0
DYD3_k127_5703053_3 Aromatic amino acid lyase K01745 - 4.3.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007185 522.0
DYD3_k127_5703053_4 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008987,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016053,GO:0017144,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0019805,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046496,GO:0046874,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.5.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005376 490.0
DYD3_k127_5703053_5 Beta-eliminating lyase K11717 - 2.8.1.7,4.4.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003703 464.0
DYD3_k127_5703053_6 sulfurtransferase K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002409 352.0
DYD3_k127_5703053_7 Uncharacterized protein family (UPF0051) K09015 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 340.0
DYD3_k127_5703053_8 Catalyzes the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway K01468 - 3.5.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005198 304.0
DYD3_k127_5703053_9 Belongs to the glycerate kinase type-1 family K00865 - 2.7.1.165 0.0000000000000000000000000000000000000000000000000000000000000000000000000002729 271.0
DYD3_k127_5737896_0 PFAM AMP-dependent synthetase and ligase K00666 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006982 615.0
DYD3_k127_5737896_1 repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004202 448.0
DYD3_k127_5737896_2 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003629 401.0
DYD3_k127_5737896_3 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003 251.0
DYD3_k127_5737896_4 AhpC/TSA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000001103 253.0
DYD3_k127_5737896_5 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000000000000000725 205.0
DYD3_k127_5737896_6 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000000000000000001512 103.0
DYD3_k127_5737896_7 DNA binding domain with preference for A/T rich regions K18958 GO:0001101,GO:0008150,GO:0010033,GO:0033993,GO:0042221,GO:0046677,GO:0050896,GO:0070542,GO:1901700 - 0.0000000000000000000005809 101.0
DYD3_k127_5737896_8 Fungalysin/Thermolysin Propeptide Motif - - - 0.0002358 53.0
DYD3_k127_5750416_0 Methionine synthase K00548 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008652,GO:0008705,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016741,GO:0019752,GO:0030312,GO:0032259,GO:0042084,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.1.13 0.0 1296.0
DYD3_k127_5750416_1 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002567 494.0
DYD3_k127_5750416_10 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000005111 260.0
DYD3_k127_5750416_11 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002791 256.0
DYD3_k127_5750416_12 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002993 256.0
DYD3_k127_5750416_13 ABC-type branched-chain amino acid transport systems, periplasmic component - - - 0.00000000000000000000000000000000000000000000000000000000000001049 238.0
DYD3_k127_5750416_14 - K01406 - 3.4.24.40 0.000000000000000000000000000000000000000000000000000000000001168 228.0
DYD3_k127_5750416_15 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 - 5.1.3.13 0.0000000000000000000000000000000000000000000000000000000003529 207.0
DYD3_k127_5750416_16 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000001389 194.0
DYD3_k127_5750416_17 alpha beta - - - 0.000000000000000000000000000000000000000000000001727 194.0
DYD3_k127_5750416_18 Ferredoxin K05524 - - 0.000000000000000000000000000000000000000000000005536 179.0
DYD3_k127_5750416_19 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000008798 185.0
DYD3_k127_5750416_2 P-aminobenzoate N-oxygenase AurF - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002252 467.0
DYD3_k127_5750416_20 Domain of unknown function (DUF4173) - - - 0.000000000000000000000000000000000000000004691 171.0
DYD3_k127_5750416_21 Branched-chain amino acid ATP-binding cassette transporter K01995,K01998 - - 0.00000000000000000000000000000000000000000573 160.0
DYD3_k127_5750416_22 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000005118 168.0
DYD3_k127_5750416_23 Protein of unknown function (DUF3152) - - - 0.000000000000000000000000000000000000004374 158.0
DYD3_k127_5750416_24 NUDIX domain - - - 0.000000000000000000000000000000005748 138.0
DYD3_k127_5750416_25 PFAM NHL repeat containing protein - - - 0.000000000000000000000000000008189 133.0
DYD3_k127_5750416_26 GDSL-like Lipase/Acylhydrolase - - - 0.000000000000000000000000005653 129.0
DYD3_k127_5750416_27 Ferredoxin - - - 0.00000000000000000000000002006 117.0
DYD3_k127_5750416_28 - K07018 - - 0.00000000000000000000000004322 115.0
DYD3_k127_5750416_29 response to heat K07090 - - 0.0000000000000000000001261 102.0
DYD3_k127_5750416_3 tRNA synthetases class I (C) catalytic domain K01883 - 6.1.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000345 440.0
DYD3_k127_5750416_30 Uncharacterised protein family UPF0047 - - - 0.0000000000000000000006078 100.0
DYD3_k127_5750416_31 hydrolase of the alpha beta superfamily K07018 - - 0.0000000000000001779 88.0
DYD3_k127_5750416_32 Domain of unknown function (DUF222) - - - 0.0000000000000004917 91.0
DYD3_k127_5750416_34 - - - - 0.00000000000002021 87.0
DYD3_k127_5750416_35 Protein of unknown function (DUF3105) - - - 0.00000002578 66.0
DYD3_k127_5750416_37 - - - - 0.0000007834 58.0
DYD3_k127_5750416_38 acetyltransferase K22476 - 2.3.1.1 0.000008581 51.0
DYD3_k127_5750416_4 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005645 405.0
DYD3_k127_5750416_5 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term K00441 - 1.12.98.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003552 406.0
DYD3_k127_5750416_6 Alcohol dehydrogenase GroES-like domain K00121,K00148 - 1.1.1.1,1.1.1.284,1.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002605 347.0
DYD3_k127_5750416_7 TIGRFAM acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase K01439 - 3.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004884 292.0
DYD3_k127_5750416_8 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002949 280.0
DYD3_k127_5750416_9 Belongs to the binding-protein-dependent transport system permease family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005221 282.0
DYD3_k127_57516_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030312,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005727 412.0
DYD3_k127_57516_1 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0016020,GO:0019222,GO:0019843,GO:0030312,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0071944,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006568 268.0
DYD3_k127_57516_2 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000008281 211.0
DYD3_k127_57516_3 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000004376 203.0
DYD3_k127_57516_4 Ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0015934,GO:0016020,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071944,GO:1990904 - 0.0000000000000000000000000000000000000000000004735 169.0
DYD3_k127_57516_5 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0030312,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0040007,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:1901360 5.4.99.12 0.000000000000000000000000001017 117.0
DYD3_k127_57516_6 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.00000000000001024 74.0
DYD3_k127_5803800_0 Molybdopterin oxidoreductase Fe4S4 domain - - - 3.832e-274 861.0
DYD3_k127_5803800_1 GTP-binding protein K06207 - - 1.581e-203 653.0
DYD3_k127_5803800_10 domain protein - - - 0.0000000002278 75.0
DYD3_k127_5803800_2 AAA domain, putative AbiEii toxin, Type IV TA system K16786,K16787 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000483 425.0
DYD3_k127_5803800_3 Molybdenum Cofactor Synthesis C K03639 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944 4.1.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004188 389.0
DYD3_k127_5803800_4 ECF transporter, substrate-specific component K16927 - - 0.00000000000000000000000000000000000000000000000000000006623 210.0
DYD3_k127_5803800_5 COG3118 Thioredoxin domain-containing protein K03671,K05838 - - 0.0000000000000000000000000000000000000000001043 174.0
DYD3_k127_5803800_6 cobalt transport K16785 - - 0.000000000000000000000000000007235 136.0
DYD3_k127_5803800_7 Psort location Cytoplasmic, score - - - 0.0000000000000000000000000001516 128.0
DYD3_k127_5803800_8 PFAM Prenyltransferase squalene oxidase - - - 0.000000000001724 76.0
DYD3_k127_5803800_9 peroxiredoxin activity - - - 0.000000000002236 72.0
DYD3_k127_5820655_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 GO:0003674,GO:0003824,GO:0004176,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006508,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009057,GO:0010468,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019222,GO:0019538,GO:0030163,GO:0040007,GO:0042623,GO:0043170,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 1.023e-248 784.0
DYD3_k127_5820655_1 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007943 552.0
DYD3_k127_5820655_10 Domain of unknown function (DUF2520) - - - 0.000000000000000000000000000000000000000000000000004381 192.0
DYD3_k127_5820655_11 DNA polymerase III, delta K02341 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0032991,GO:0034641,GO:0034645,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:1901360,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 0.00000000000000000000000000000000000000000000000008006 194.0
DYD3_k127_5820655_12 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.000000000000000000000000000000000000000000000005698 175.0
DYD3_k127_5820655_13 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 - 2.7.6.3 0.000000000000000000000000000000003562 139.0
DYD3_k127_5820655_14 Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA K18955 - - 0.000000000000000004418 86.0
DYD3_k127_5820655_15 Extension to Ser/Thr-type protein kinases K07376 - 2.7.11.12 0.00000000000001084 82.0
DYD3_k127_5820655_16 Pterin binding enzyme K00796 - 2.5.1.15 0.0000000000002487 82.0
DYD3_k127_5820655_17 Carboxypeptidase regulatory-like domain - - - 0.0000000001644 74.0
DYD3_k127_5820655_18 Belongs to the peptidase S8 family - - - 0.000003467 60.0
DYD3_k127_5820655_19 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.000006116 59.0
DYD3_k127_5820655_2 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005597 443.0
DYD3_k127_5820655_3 Pterin binding enzyme K00796,K13941 - 2.5.1.15,2.7.6.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002092 293.0
DYD3_k127_5820655_4 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002374 286.0
DYD3_k127_5820655_5 quinolinate catabolic process K00278,K00767 GO:0003674,GO:0003824,GO:0004514,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016054,GO:0016740,GO:0016757,GO:0016763,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034213,GO:0034641,GO:0034654,GO:0042737,GO:0043436,GO:0043648,GO:0043649,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046395,GO:0046483,GO:0046496,GO:0046700,GO:0046874,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0072526,GO:0090407,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 1.4.3.16,2.4.2.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008846 274.0
DYD3_k127_5820655_6 Zincin-like metallopeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004523 265.0
DYD3_k127_5820655_7 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000002557 248.0
DYD3_k127_5820655_8 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.0000000000000000000000000000000000000000000000000000000000000004432 241.0
DYD3_k127_5820655_9 GTP cyclohydrolase K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0040007,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 0.0000000000000000000000000000000000000000000000000003061 191.0
DYD3_k127_5946381_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004586 444.0
DYD3_k127_5946381_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005502 333.0
DYD3_k127_5946381_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K03074 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009285 294.0
DYD3_k127_5946381_3 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 GO:0003674,GO:0003824,GO:0003999,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006144,GO:0006168,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009113,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0034641,GO:0034654,GO:0042440,GO:0043094,GO:0043096,GO:0043101,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044464,GO:0046083,GO:0046084,GO:0046112,GO:0046148,GO:0046483,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.4.2.7 0.00000000000000000000000000000000000000000000000000000000000000000005658 235.0
DYD3_k127_5946381_4 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.0000000000000000000000000000000000000000000016 178.0
DYD3_k127_5946381_5 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.00000000000000000000000000000000001461 142.0
DYD3_k127_5946381_6 Preprotein translocase subunit K03210 - - 0.00000000000000000003046 94.0
DYD3_k127_5946381_7 antibiotic catabolic process - - - 0.0002645 52.0
DYD3_k127_5949450_0 dna ligase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001873 446.0
DYD3_k127_5949450_1 Belongs to the GarS family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006043 387.0
DYD3_k127_5949450_2 dna ligase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004796 381.0
DYD3_k127_5949450_3 histidine kinase HAMP region domain protein K02484 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002692 376.0
DYD3_k127_5949450_4 Two component transcriptional regulator, winged helix family K02483 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002522 312.0
DYD3_k127_5949450_5 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000005286 172.0
DYD3_k127_5949450_6 Cytotoxic translational repressor of toxin-antitoxin stability system - - - 0.000000000000000000000000000000000000000000582 159.0
DYD3_k127_5949450_7 sequence-specific DNA binding - - - 0.00000000000000000000000000000000000008352 145.0
DYD3_k127_5950899_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0016020,GO:0030312,GO:0032991,GO:0033554,GO:0040007,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:0071944,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 2.33e-220 723.0
DYD3_k127_5950899_1 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0036094,GO:0043891,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001986 482.0
DYD3_k127_5950899_2 Belongs to the phosphoglycerate kinase family K00927,K01803 - 2.7.2.3,5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007627 418.0
DYD3_k127_5950899_3 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity K15635 - 5.4.2.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005497 407.0
DYD3_k127_5950899_4 ABC transporter substrate-binding protein K02035,K15580 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005818 349.0
DYD3_k127_5950899_5 Displays ATPase and GTPase activities K06958 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004357 333.0
DYD3_k127_5950899_6 Required for morphogenesis under gluconeogenic growth conditions - - - 0.000000000000000000000000000000000000000000000000000000000000007033 230.0
DYD3_k127_5950899_7 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0040007,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 5.3.1.1 0.000000000000000000000000000000000000000000000000000000000000472 215.0
DYD3_k127_5950899_8 May be required for sporulation K09762 - - 0.0000000000000000000000000000000000000000000004353 180.0
DYD3_k127_5950899_9 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0040007,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 5.3.1.1 0.0000000000000000000000000002248 115.0
DYD3_k127_5972421_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008601 504.0
DYD3_k127_5972421_1 DNA primase DnaG DnaB-binding K02316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002251 409.0
DYD3_k127_5972421_2 Belongs to the dGTPase family. Type 2 subfamily K01129 - 3.1.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001935 355.0
DYD3_k127_5998912_0 amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 496.0
DYD3_k127_5998912_1 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000002472 100.0
DYD3_k127_5998912_2 belongs to the sigma-70 factor family, ECF subfamily K03088 - - 0.00000000002255 68.0
DYD3_k127_6000132_0 drug exporters of the RND superfamily K06994 - - 0.0000000000000000000000000000000000000000000000000000000000000006025 225.0
DYD3_k127_6000132_1 N-acetylmuramoyl-L-alanine amidase - - - 0.00000000000000000000000000000000000000000000000000000002715 218.0
DYD3_k127_6000132_3 Peptidoglycan binding domain - - - 0.000006589 59.0
DYD3_k127_6000132_4 Belongs to the peptidase S8 family - - - 0.00001463 58.0
DYD3_k127_6017971_0 Ferredoxin oxidoreductase K00174 - 1.2.7.11,1.2.7.3 4.183e-260 814.0
DYD3_k127_6017971_1 cellulose binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005862 590.0
DYD3_k127_6017971_10 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009399 279.0
DYD3_k127_6017971_11 Crp-like helix-turn-helix domain K10914 - - 0.000000000000000000000000000000000000000000000000000000000000000001589 233.0
DYD3_k127_6017971_12 Belongs to the MIP aquaporin (TC 1.A.8) family - - - 0.0000000000000000000000000000000000000000000002918 179.0
DYD3_k127_6017971_13 TIGRFAM sugar-phosphate isomerase, RpiB LacA LacB family K01808 - 5.3.1.6 0.0000000000000000000000000000000000000000000005692 171.0
DYD3_k127_6017971_14 Mediates influx of magnesium ions K03284 - - 0.000000000000000000000000000000000000000000001031 181.0
DYD3_k127_6017971_15 Acyltransferase family - - - 0.0000000000000000000000000000000000000004337 164.0
DYD3_k127_6017971_16 RmlD substrate binding domain - - - 0.000000000000000000000000000000000001071 160.0
DYD3_k127_6017971_17 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin - - - 0.000000000000000000000000000000000006367 152.0
DYD3_k127_6017971_18 COG2931, RTX toxins and related Ca2 -binding proteins K20276 - - 0.000000000000000000000000000000001612 152.0
DYD3_k127_6017971_19 Oxidoreductase K15977 - - 0.0000000000000000000000000000002056 130.0
DYD3_k127_6017971_2 Ferredoxin oxidoreductase K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003297 469.0
DYD3_k127_6017971_20 InterPro IPR007367 - - - 0.00000000000000000000000000001016 119.0
DYD3_k127_6017971_21 AsnC family - - - 0.00000000000000000000000000001885 120.0
DYD3_k127_6017971_22 - - - - 0.0000000000000000000000000001096 118.0
DYD3_k127_6017971_23 amine oxidase K00276 - 1.4.3.21 0.0000000000000000000000001689 117.0
DYD3_k127_6017971_24 - - - - 0.0000000000000000001928 91.0
DYD3_k127_6017971_25 Sigma-70, region 4 - - - 0.000000000000000002387 93.0
DYD3_k127_6017971_26 response regulator - GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 - 0.00000000000000000826 92.0
DYD3_k127_6017971_27 - - - - 0.00000000000000007812 84.0
DYD3_k127_6017971_28 Belongs to the peptidase S1B family - - - 0.0000000000000009899 93.0
DYD3_k127_6017971_29 Belongs to the TPP enzyme family K07004 - - 0.00000000003387 78.0
DYD3_k127_6017971_3 GIY-YIG type nucleases (URI domain) K02342 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0016020,GO:0030312,GO:0032991,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0071944,GO:1902494,GO:1905347,GO:1905348,GO:1990391 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 424.0
DYD3_k127_6017971_30 Subtilase family K14743 - - 0.0002828 54.0
DYD3_k127_6017971_4 PFAM L-carnitine dehydratase bile acid-inducible protein F K01796 - 5.1.99.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003598 378.0
DYD3_k127_6017971_5 GMC oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009787 382.0
DYD3_k127_6017971_6 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 375.0
DYD3_k127_6017971_7 AAA ATPase domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002503 357.0
DYD3_k127_6017971_8 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007116 325.0
DYD3_k127_6017971_9 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0040007,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 334.0
DYD3_k127_6138708_0 exo-alpha-(2->6)-sialidase activity - - - 0.0000000000000000000000000000000000000295 166.0
DYD3_k127_6138708_2 undecaprenyl-phosphate glucose phosphotransferase activity K05946,K13657,K13660,K21303 GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009243,GO:0009987,GO:0016051,GO:0016740,GO:0016772,GO:0016780,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0046402,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.4.1.187,2.4.1.252,2.7.8.40 0.00002192 52.0
DYD3_k127_6148842_0 Belongs to the cysteine synthase cystathionine beta- synthase family K01697 GO:0003674,GO:0005488,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008144,GO:0016020,GO:0019842,GO:0030170,GO:0030312,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0048037,GO:0050662,GO:0070279,GO:0071944,GO:0097159,GO:1901363 4.2.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 600.0
DYD3_k127_6148842_1 Bacterial fructose-1,6-bisphosphatase, glpX-encoded K02446 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0019318,GO:0019319,GO:0019637,GO:0030145,GO:0030388,GO:0042132,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0046872,GO:0046914,GO:0050308,GO:0071704,GO:1901135,GO:1901576 3.1.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006612 419.0
DYD3_k127_6148842_2 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K14162 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006183 363.0
DYD3_k127_6148842_3 lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000000000000000000000000000000000003231 219.0
DYD3_k127_6148842_5 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000000005507 108.0
DYD3_k127_6148842_6 - - - - 0.000003143 56.0
DYD3_k127_6148842_7 - - - - 0.000005963 57.0
DYD3_k127_6211002_0 TIGRFAM glutamine synthetase, type I K01915 - 6.3.1.2 2.559e-242 754.0
DYD3_k127_6211002_1 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 GO:0000820,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006521,GO:0008150,GO:0008882,GO:0010565,GO:0016020,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0030312,GO:0031323,GO:0033238,GO:0040007,GO:0042221,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0060359,GO:0062012,GO:0065007,GO:0070566,GO:0071944,GO:0080090,GO:1901698 2.7.7.42,2.7.7.89 8.232e-214 698.0
DYD3_k127_6211002_2 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001355 571.0
DYD3_k127_6211002_3 PFAM glutamine synthetase catalytic region K01915 - 6.3.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000671 553.0
DYD3_k127_6211002_4 Enoyl-CoA hydratase/isomerase - - - 0.00000000000000000000000000000000000007841 151.0
DYD3_k127_6211002_5 Alpha beta hydrolase K01561 - 3.8.1.3 0.0000000000000000000000000000001284 135.0
DYD3_k127_6211002_6 IMP dehydrogenase activity - - - 0.00000000000000002978 91.0
DYD3_k127_6211002_7 Helix-turn-helix domain - - - 0.0000000003749 65.0
DYD3_k127_621342_0 TIGRFAM Cell shape determining protein MreB Mrl K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003633 522.0
DYD3_k127_621342_1 ribonuclease, Rne Rng family K08300,K08301 - 3.1.26.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 511.0
DYD3_k127_621342_10 Belongs to the SEDS family K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004979 330.0
DYD3_k127_621342_11 Involved in formation and maintenance of cell shape K03570 - - 0.00000000000000000000000000000000000000000002152 174.0
DYD3_k127_621342_12 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K07032 - - 0.00000000000000000000000000000000000000000005649 165.0
DYD3_k127_621342_13 Toxic component of a toxin-antitoxin (TA) module. An RNase K07065 - - 0.0000000000000000000000000000000000000001148 154.0
DYD3_k127_621342_14 PIN domain - - - 0.0000000000000000000000000000000000007329 147.0
DYD3_k127_621342_15 Putative restriction endonuclease - - - 0.000000000000000000000000000000000001495 147.0
DYD3_k127_621342_16 Acyltransferase K00655 - 2.3.1.51 0.0000000000000000000000000000000001652 151.0
DYD3_k127_621342_17 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0008150,GO:0015934,GO:0016020,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071944,GO:1990904 - 0.0000000000000000000000000000007633 124.0
DYD3_k127_621342_18 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.0000000000000000001061 90.0
DYD3_k127_621342_19 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944 - 0.000000000000000004941 94.0
DYD3_k127_621342_2 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 - 1.2.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001786 474.0
DYD3_k127_621342_20 rod shape-determining protein (MreD) K03571 - - 0.0000000000000001162 90.0
DYD3_k127_621342_21 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.0000000000003188 84.0
DYD3_k127_621342_22 Protein of unknown function (DUF1706) - - - 0.000000003525 66.0
DYD3_k127_621342_3 N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity K00821,K05830,K09251 - 2.6.1.11,2.6.1.17,2.6.1.82 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002752 476.0
DYD3_k127_621342_4 VWA domain containing CoxE-like protein K07161 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007057 447.0
DYD3_k127_621342_5 Aldehyde dehydrogenase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008386 446.0
DYD3_k127_621342_6 Penicillin-binding Protein dimerisation domain K05515 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003027 418.0
DYD3_k127_621342_7 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009045 392.0
DYD3_k127_621342_8 PFAM ATPase associated with various cellular activities - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004128 373.0
DYD3_k127_621342_9 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 GO:0003674,GO:0003824,GO:0004349,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0018130,GO:0019202,GO:0019752,GO:0040007,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000079 347.0
DYD3_k127_6233078_0 Cytochrome c oxidase subunit III K02276,K02299 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000002214 252.0
DYD3_k127_6233078_1 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) K02862 - - 0.000000000000000000000000000000000000000000000000000009311 204.0
DYD3_k127_6233078_2 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274,K02298,K02827 GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005507,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009055,GO:0009060,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009319,GO:0009486,GO:0009987,GO:0015002,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015453,GO:0015672,GO:0015980,GO:0015988,GO:0015990,GO:0016020,GO:0016021,GO:0016310,GO:0016491,GO:0016679,GO:0016682,GO:0017144,GO:0019637,GO:0019646,GO:0019693,GO:0020037,GO:0022804,GO:0022857,GO:0022890,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0034220,GO:0034641,GO:0042773,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0046872,GO:0046906,GO:0046914,GO:0048037,GO:0048038,GO:0048039,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0055114,GO:0070069,GO:0071704,GO:0071944,GO:0072521,GO:0097159,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901360,GO:1901363,GO:1901564,GO:1902494,GO:1902600 1.10.3.10,1.10.3.12,1.9.3.1 0.000000000000000000000000000000000000000000001041 171.0
DYD3_k127_6233078_3 Prokaryotic Cytochrome C oxidase subunit IV K02277 - 1.9.3.1 0.00000000001301 68.0
DYD3_k127_6233078_4 COG2133 Glucose sorbosone dehydrogenases - - - 0.00004178 55.0
DYD3_k127_6233078_5 PFAM blue (type 1) copper domain protein - - - 0.0003077 52.0
DYD3_k127_6246529_0 PFAM UvrD REP helicase K03657 GO:0000287,GO:0003674,GO:0003678,GO:0003824,GO:0004386,GO:0005488,GO:0006996,GO:0008094,GO:0008150,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0040007,GO:0042623,GO:0043167,GO:0043169,GO:0046872,GO:0051276,GO:0071103,GO:0071840,GO:0140097 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002857 433.0
DYD3_k127_6246529_1 Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB) K02549 - 4.2.1.113 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005345 402.0
DYD3_k127_6246529_11 - - - - 0.0000000000148 77.0
DYD3_k127_6246529_2 Peptidase dimerisation domain K01295 - 3.4.17.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002717 323.0
DYD3_k127_6246529_3 Sir2 family K12410 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002678 316.0
DYD3_k127_6246529_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001731 305.0
DYD3_k127_6246529_5 haloacid dehalogenase-like hydrolase - GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000001392 246.0
DYD3_k127_6246529_6 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.00000000000000000000000000000000000000000000000000000008118 204.0
DYD3_k127_6246529_7 carboxylic acid catabolic process K01736 - 4.2.3.5 0.0000000000000000000000000000000000000001072 170.0
DYD3_k127_6246529_8 RES domain - - - 0.0000000000000000000000000000000002137 139.0
DYD3_k127_6246529_9 amine dehydrogenase activity - - - 0.0000000000000005679 91.0
DYD3_k127_6297872_0 Transketolase, pyrimidine binding domain K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009214 347.0
DYD3_k127_6297872_1 Transketolase, thiamine diphosphate binding domain K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004358 289.0
DYD3_k127_6297872_2 40-residue YVTN family beta-propeller repeat - - - 0.000000000000000000000008175 116.0
DYD3_k127_6297872_3 - - - - 0.00000000001292 71.0
DYD3_k127_631996_0 Histidine kinase K00936 GO:0000155,GO:0000160,GO:0000166,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0005488,GO:0005524,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0017076,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035556,GO:0035639,GO:0036094,GO:0036211,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000226 353.0
DYD3_k127_631996_1 Diacylglycerol kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000007257 233.0
DYD3_k127_631996_2 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000003507 223.0
DYD3_k127_631996_3 Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA K18955 - - 0.000000000000000000000000000004415 124.0
DYD3_k127_631996_4 alpha/beta hydrolase fold - - - 0.0000000000000000000000000000991 133.0
DYD3_k127_631996_5 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.00000000000000000001166 104.0
DYD3_k127_631996_6 SPTR CHU large protein - - - 0.0000000000002487 82.0
DYD3_k127_631996_7 Rdx family K07401 - - 0.00000000003495 65.0
DYD3_k127_6345976_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 9.188e-221 692.0
DYD3_k127_6345976_1 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 1.454e-214 687.0
DYD3_k127_6345976_10 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944 6.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003163 475.0
DYD3_k127_6345976_11 ATPase with chaperone activity K07391 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008592 460.0
DYD3_k127_6345976_12 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004573 441.0
DYD3_k127_6345976_13 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016020,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030312,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044464,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001411 421.0
DYD3_k127_6345976_14 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016616,GO:0040007,GO:0044424,GO:0044464,GO:0055114 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001679 396.0
DYD3_k127_6345976_15 Participates in both transcription termination and antitermination K02600 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0016020,GO:0019219,GO:0019222,GO:0030312,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0040007,GO:0043244,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006296 397.0
DYD3_k127_6345976_16 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0050897,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 391.0
DYD3_k127_6345976_17 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004522 383.0
DYD3_k127_6345976_18 Aminotransferase, class V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002198 372.0
DYD3_k127_6345976_19 AAA domain, putative AbiEii toxin, Type IV TA system K02028,K09972,K10041 - 3.6.3.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008606 382.0
DYD3_k127_6345976_2 Required for chromosome condensation and partitioning K03529 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 1.671e-204 677.0
DYD3_k127_6345976_20 extracellular solute-binding protein, family 3 K09969 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003426 375.0
DYD3_k127_6345976_21 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0019538,GO:0022626,GO:0022627,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 361.0
DYD3_k127_6345976_22 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K02405 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002493 349.0
DYD3_k127_6345976_23 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus K00057 - 1.1.1.94 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005146 350.0
DYD3_k127_6345976_24 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K01761 - 4.4.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000254 338.0
DYD3_k127_6345976_25 Catalyzes the reversible phosphorylation of UMP to UDP K09903 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006213,GO:0006220,GO:0006221,GO:0006225,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009163,GO:0009165,GO:0009185,GO:0009188,GO:0009193,GO:0009194,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0033862,GO:0034404,GO:0034641,GO:0034654,GO:0040007,GO:0042455,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046048,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0046872,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002884 325.0
DYD3_k127_6345976_26 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002214 307.0
DYD3_k127_6345976_27 TIGRFAM polar amino acid ABC transporter, inner membrane subunit K09970 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009868 294.0
DYD3_k127_6345976_28 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007231 291.0
DYD3_k127_6345976_29 phosphoenolpyruvate carboxykinase (ATP) activity K01610 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004611,GO:0004612,GO:0005488,GO:0005509,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0016051,GO:0016829,GO:0016830,GO:0016831,GO:0017076,GO:0019318,GO:0019319,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0046872,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901576 4.1.1.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008335 304.0
DYD3_k127_6345976_3 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017101,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002064 584.0
DYD3_k127_6345976_30 acid ABC transporter, permease protein, 3-TM region, His Glu Gln Arg opine K09971 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001718 287.0
DYD3_k127_6345976_31 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000003632 270.0
DYD3_k127_6345976_32 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000000411 261.0
DYD3_k127_6345976_33 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000195 260.0
DYD3_k127_6345976_34 Dak phosphatase K07030 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000018 267.0
DYD3_k127_6345976_35 TIGRFAM Tyrosine recombinase XerD K03733,K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000001125 246.0
DYD3_k127_6345976_36 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000724 223.0
DYD3_k127_6345976_37 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000003595 226.0
DYD3_k127_6345976_38 Peptidase family M50 K11749 GO:0008150,GO:0040007 - 0.0000000000000000000000000000000000000000000000000000000000000189 237.0
DYD3_k127_6345976_39 - - - - 0.00000000000000000000000000000000000000000000000000000000000004431 241.0
DYD3_k127_6345976_4 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008014 572.0
DYD3_k127_6345976_40 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0030312,GO:0032984,GO:0034641,GO:0034645,GO:0040007,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000005804 222.0
DYD3_k127_6345976_41 Sterol carrier protein domain - - - 0.000000000000000000000000000000000000000000000000000000000001146 226.0
DYD3_k127_6345976_42 Helix-turn-helix XRE-family like proteins - - - 0.0000000000000000000000000000000000000000000000000000000004576 207.0
DYD3_k127_6345976_43 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.0000000000000000000000000000000000000000000000000000001152 198.0
DYD3_k127_6345976_44 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0019538,GO:0030312,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000005843 206.0
DYD3_k127_6345976_45 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 GO:0008150,GO:0040007 2.7.4.16 0.000000000000000000000000000000000000000000000000000001588 207.0
DYD3_k127_6345976_46 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.0000000000000000000000000000000000000000000000000001678 192.0
DYD3_k127_6345976_47 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000002217 193.0
DYD3_k127_6345976_48 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.000000000000000000000000000000000000000000000000002368 193.0
DYD3_k127_6345976_49 PFAM Phosphoribosyltransferase - - - 0.000000000000000000000000000000000000000000000000005138 188.0
DYD3_k127_6345976_5 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005844 569.0
DYD3_k127_6345976_50 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.00000000000000000000000000000000000000000000003615 179.0
DYD3_k127_6345976_51 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0008150,GO:0015934,GO:0016020,GO:0022625,GO:0022626,GO:0032991,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071944,GO:1990904 - 0.000000000000000000000000000000000000000000008903 168.0
DYD3_k127_6345976_52 TIGRFAM DNA protecting protein DprA K04096 - - 0.000000000000000000000000000000000000000004277 167.0
DYD3_k127_6345976_53 Subtilase family K17734 - - 0.000000000000000000000000000000000000000004599 177.0
DYD3_k127_6345976_54 Cytidylyltransferase family K00981 GO:0003674,GO:0003824,GO:0004605,GO:0005575,GO:0005618,GO:0005623,GO:0006139,GO:0006220,GO:0006221,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016020,GO:0016024,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0030312,GO:0034641,GO:0034654,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044281,GO:0044464,GO:0045017,GO:0046341,GO:0046471,GO:0046474,GO:0046483,GO:0046486,GO:0055086,GO:0070567,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.41 0.00000000000000000000000000000000000000002434 170.0
DYD3_k127_6345976_55 Acyltransferase K00655 - 2.3.1.51 0.000000000000000000000000000000000000004615 160.0
DYD3_k127_6345976_56 Protein of unknown function (DUF2469) - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000009896 150.0
DYD3_k127_6345976_57 MDMPI C-terminal domain - - - 0.00000000000000000000000000000000000001275 168.0
DYD3_k127_6345976_58 carboxylic ester hydrolase activity K01055 - 3.1.1.24 0.000000000000000000000000000000000004283 147.0
DYD3_k127_6345976_59 Conserved hypothetical protein 95 K08316 - 2.1.1.171 0.000000000000000000000000000000000009654 145.0
DYD3_k127_6345976_6 Dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis K21147 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006732,GO:0006777,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008146,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009108,GO:0009605,GO:0009607,GO:0009987,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0016782,GO:0018130,GO:0019344,GO:0019538,GO:0019637,GO:0019720,GO:0019752,GO:0020012,GO:0030312,GO:0030682,GO:0042783,GO:0043170,GO:0043207,GO:0043436,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0050896,GO:0051186,GO:0051188,GO:0051189,GO:0051701,GO:0051704,GO:0051707,GO:0051805,GO:0051807,GO:0051810,GO:0051832,GO:0051834,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0061605,GO:0070566,GO:0071704,GO:0071944,GO:0075136,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.7.80,2.8.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002125 546.0
DYD3_k127_6345976_60 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 GO:0008150,GO:0040007 - 0.0000000000000000000000000000000002571 138.0
DYD3_k127_6345976_61 Evidence 2b Function of strongly homologous gene - - - 0.0000000000000000000000000000000004072 145.0
DYD3_k127_6345976_62 Periplasmic component of the Tol biopolymer transport system - - - 0.00000000000000000000000000000008612 143.0
DYD3_k127_6345976_63 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000003322 124.0
DYD3_k127_6345976_64 Uncharacterized ACR, COG1399 K07040 GO:0008150,GO:0040007 - 0.000000000000000000000000000001072 130.0
DYD3_k127_6345976_65 PFAM regulatory protein AsnC Lrp family - - - 0.000000000000000000000000000001225 128.0
DYD3_k127_6345976_66 COG1404 Subtilisin-like serine proteases K13276 - - 0.0000000000000000000000000000268 135.0
DYD3_k127_6345976_67 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198 - 0.000000000000000000000000005088 112.0
DYD3_k127_6345976_68 Required for maturation of 30S ribosomal subunits K09748 - - 0.000000000000000000000002437 108.0
DYD3_k127_6345976_69 Belongs to the UPF0102 family K07460 - - 0.000000000000000000000005553 106.0
DYD3_k127_6345976_7 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 521.0
DYD3_k127_6345976_70 belongs to the sigma-70 factor family, ECF subfamily - - - 0.0000000000000000000000112 108.0
DYD3_k127_6345976_71 PFAM peptidase - - - 0.000000000000000000002425 106.0
DYD3_k127_6345976_72 nucleotidyltransferase activity K14941 GO:0003674,GO:0003824,GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0043814,GO:0044237,GO:0044249,GO:0051186,GO:0051188,GO:0070568 2.7.7.68 0.000000000000000001297 96.0
DYD3_k127_6345976_73 Belongs to the peptidase S8 family K13276,K17734 - - 0.00000000000000000327 100.0
DYD3_k127_6345976_74 Peptidase C13 family - - - 0.000000000000000003512 94.0
DYD3_k127_6345976_75 Protein of unknown function (DUF503) K09764 - - 0.0000000000000000109 85.0
DYD3_k127_6345976_76 Belongs to the UPF0109 family K06960 - - 0.00000000000000002056 87.0
DYD3_k127_6345976_77 Peptidase C13 family - - - 0.0000000000000000621 93.0
DYD3_k127_6345976_78 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.000000000000005897 76.0
DYD3_k127_6345976_79 - - - - 0.0000000000001163 79.0
DYD3_k127_6345976_8 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002393 531.0
DYD3_k127_6345976_80 Belongs to the bacterial histone-like protein family K03530 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006355,GO:0006725,GO:0006807,GO:0006873,GO:0006875,GO:0006879,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0009267,GO:0009605,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0009991,GO:0010106,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016020,GO:0016043,GO:0019219,GO:0019222,GO:0019725,GO:0030003,GO:0030312,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031667,GO:0031668,GO:0031669,GO:0032991,GO:0032993,GO:0033554,GO:0034641,GO:0040007,GO:0042262,GO:0042592,GO:0042594,GO:0043170,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0045893,GO:0045935,GO:0046483,GO:0046916,GO:0048518,GO:0048522,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051716,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0060255,GO:0065007,GO:0065008,GO:0071496,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0090143,GO:0090304,GO:0097100,GO:0097159,GO:0098771,GO:0140110,GO:1901360,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 - 0.0000000000003113 79.0
DYD3_k127_6345976_81 Protein of unknown function (DUF448) K07742 - - 0.000000000007794 71.0
DYD3_k127_6345976_83 CarboxypepD_reg-like domain K13276 GO:0005575,GO:0005576 - 0.000000009175 68.0
DYD3_k127_6345976_84 Cell division initiation protein - GO:0008150,GO:0040007 - 0.0000001062 60.0
DYD3_k127_6345976_85 Dodecin K09165 - - 0.0000005755 58.0
DYD3_k127_6345976_86 GTP binding - - - 0.0000007376 54.0
DYD3_k127_6345976_87 protein conserved in bacteria K09607 - - 0.00002501 57.0
DYD3_k127_6345976_88 - - - - 0.0001496 55.0
DYD3_k127_6345976_9 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002635 494.0
DYD3_k127_6386889_0 Belongs to the binding-protein-dependent transport system permease family K01995,K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008254 387.0
DYD3_k127_6386889_1 ATPases associated with a variety of cellular activities K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006312 272.0
DYD3_k127_6386889_10 Fibronectin type 3 domain - - - 0.0006987 52.0
DYD3_k127_6386889_2 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000009328 188.0
DYD3_k127_6386889_3 DEAD DEAH box helicase K06877 - - 0.00000000000000000000000000000000000000001379 154.0
DYD3_k127_6386889_4 pyridoxamine 5-phosphate K07005 - - 0.000000000000000000000000000000006712 134.0
DYD3_k127_6386889_5 Sortase family K07284 - 3.4.22.70 0.00000000000000000000000003026 121.0
DYD3_k127_6386889_6 ABC transporter substrate-binding protein K01999 - - 0.00000000000000000000004057 116.0
DYD3_k127_6386889_7 Sortase family - - - 0.0000000203 68.0
DYD3_k127_6386889_8 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.000007746 59.0
DYD3_k127_6386889_9 Receptor family ligand binding region K01999 - - 0.0002631 54.0
DYD3_k127_63931_0 Protein of unknown function, DUF255 K06888 - - 6.365e-214 685.0
DYD3_k127_63931_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 309.0
DYD3_k127_63931_2 Purple acid Phosphatase, N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002381 302.0
DYD3_k127_63931_3 Transmembrane secretion effector - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009262 273.0
DYD3_k127_63931_4 Phosphoesterase family K01114 - 3.1.4.3 0.0000000000000000000000000000000000000000000000000000000004287 223.0
DYD3_k127_63931_5 Ubiquinone biosynthesis protein UbiA K02548 - 2.5.1.74 0.000000000000000000000000000000000000000000001792 178.0
DYD3_k127_63931_6 Domain of unknown function (DUF309) K09763 - - 0.000000000000000000000000004955 115.0
DYD3_k127_63931_7 RDD family - GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.0000000000000000006523 99.0
DYD3_k127_63931_8 RDD domain containing protein - GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.00000000000001232 85.0
DYD3_k127_63931_9 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000001503 61.0
DYD3_k127_6447103_0 Elongator protein 3, MiaB family, Radical SAM K11779 - 2.5.1.77 1.126e-321 1005.0
DYD3_k127_6447103_1 TIGRFAM LPPG domain protein containing protein K11212 - 2.7.8.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006979 304.0
DYD3_k127_6447103_10 - - - - 0.0000002869 55.0
DYD3_k127_6447103_2 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000617 285.0
DYD3_k127_6447103_3 Catalyzes the GTP-dependent successive addition of multiple gamma-linked L-glutamates to the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) to form polyglutamated F420 derivatives K12234 GO:0005575,GO:0005623,GO:0005886,GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016020,GO:0044237,GO:0044249,GO:0044464,GO:0051186,GO:0051188,GO:0071944 6.3.2.31,6.3.2.34 0.00000000000000000000000000000000000000000000000000000000000000000003292 242.0
DYD3_k127_6447103_4 Zincin-like metallopeptidase - - - 0.00000000000000000000000000000000007527 137.0
DYD3_k127_6447103_5 Belongs to the peptidase S8 family K20276 - - 0.0000000000000000000000000000000003547 151.0
DYD3_k127_6447103_6 Transcription factor WhiB K18955 - - 0.0000000000000000000000000000001492 129.0
DYD3_k127_6447103_7 Protein of unknown function (DUF3105) - - - 0.000000000000001224 88.0
DYD3_k127_6447103_8 Transcriptional activator domain - - - 0.0000000000002091 73.0
DYD3_k127_6447103_9 Protein of unknown function (DUF3499) - - - 0.000000000009747 68.0
DYD3_k127_6457512_0 ACT domain K00928 - 2.7.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004586 476.0
DYD3_k127_6457512_1 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 310.0
DYD3_k127_6457512_2 Transmembrane secretion effector K00943 - 2.7.4.9 0.0000000000000000000000000000000004493 148.0
DYD3_k127_6457512_3 Pilus assembly protein PilX - - - 0.00001013 58.0
DYD3_k127_6457512_4 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.0000191 54.0
DYD3_k127_652480_0 ATPase which is responsible for recognizing, binding, unfolding and translocation of pupylated proteins into the bacterial 20S proteasome core particle. May be essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase may function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis K13527 GO:0000302,GO:0000502,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009405,GO:0009987,GO:0010035,GO:0010498,GO:0010499,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0019941,GO:0022623,GO:0022624,GO:0030163,GO:0030312,GO:0032991,GO:0033554,GO:0034599,GO:0034614,GO:0035690,GO:0042221,GO:0042493,GO:0042802,GO:0043170,GO:0043335,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044419,GO:0044424,GO:0044464,GO:0044877,GO:0050896,GO:0051409,GO:0051603,GO:0051704,GO:0051716,GO:0070628,GO:0070887,GO:0071241,GO:0071704,GO:0071731,GO:0071732,GO:0071944,GO:0097366,GO:0140030,GO:0140035,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902170,GO:1902494,GO:1905368,GO:1905369 - 2.178e-251 788.0
DYD3_k127_652480_1 Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine K13571 GO:0000166,GO:0000302,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006464,GO:0006508,GO:0006807,GO:0006950,GO:0006979,GO:0008144,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009405,GO:0009987,GO:0010035,GO:0010498,GO:0016020,GO:0016740,GO:0016874,GO:0016879,GO:0016881,GO:0017076,GO:0018193,GO:0018205,GO:0019538,GO:0019787,GO:0019941,GO:0030163,GO:0030312,GO:0030554,GO:0032446,GO:0032553,GO:0032555,GO:0032559,GO:0033554,GO:0034599,GO:0034614,GO:0035639,GO:0035690,GO:0036094,GO:0036211,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044419,GO:0044464,GO:0050896,GO:0051409,GO:0051603,GO:0051704,GO:0051716,GO:0070490,GO:0070647,GO:0070887,GO:0071241,GO:0071704,GO:0071731,GO:0071732,GO:0071944,GO:0097159,GO:0097366,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902170 6.3.1.19 8.353e-234 729.0
DYD3_k127_652480_10 Arginase family K01480 - 3.5.3.11 0.000000000000000000000000000000000000000000000000000000000005026 217.0
DYD3_k127_652480_11 WYL domain K13573 GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000005219 220.0
DYD3_k127_652480_12 belongs to the sigma-70 factor family, ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000001331 184.0
DYD3_k127_652480_13 transcriptional regulator K13572,K13573 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000001283 168.0
DYD3_k127_652480_14 Belongs to the peptidase M50B family - - - 0.0000000000000000000000000000000004485 146.0
DYD3_k127_652480_15 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000001645 138.0
DYD3_k127_652480_16 PFAM Pyruvoyl-dependent arginine decarboxylase K02626 - 4.1.1.19 0.0000000000000000000000000000002862 128.0
DYD3_k127_652480_17 S-adenosylmethionine decarboxylase K01611 - 4.1.1.50 0.00000000000000000000000000001376 121.0
DYD3_k127_652480_18 Recombination endonuclease VII - - - 0.00000000000004677 75.0
DYD3_k127_652480_19 Pup-like protein K13570 - - 0.00000000000295 69.0
DYD3_k127_652480_2 Pup-ligase protein K20814 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0006464,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0010498,GO:0016787,GO:0016810,GO:0016811,GO:0017076,GO:0018193,GO:0018205,GO:0019538,GO:0019941,GO:0030163,GO:0030554,GO:0032446,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0036211,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0051603,GO:0070490,GO:0070647,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 3.5.1.119 7.432e-200 634.0
DYD3_k127_652480_20 His Kinase A (phosphoacceptor) domain - - - 0.000000000005822 76.0
DYD3_k127_652480_21 Tfp pilus assembly protein FimV - - - 0.0000005949 63.0
DYD3_k127_652480_22 thiamine diphosphate biosynthetic process K03154 - - 0.000003509 59.0
DYD3_k127_652480_23 Transposase IS116/IS110/IS902 family - - - 0.00009551 44.0
DYD3_k127_652480_24 - - - - 0.0001043 53.0
DYD3_k127_652480_3 PP-loop family K21947 - 2.8.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 336.0
DYD3_k127_652480_4 Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation K03433 GO:0000502,GO:0003674,GO:0003824,GO:0004175,GO:0004298,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005839,GO:0005886,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009405,GO:0009987,GO:0010498,GO:0016020,GO:0016787,GO:0019538,GO:0019774,GO:0019899,GO:0019941,GO:0030163,GO:0032991,GO:0035375,GO:0040007,GO:0043170,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044419,GO:0044424,GO:0044464,GO:0051603,GO:0051704,GO:0070003,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1905368,GO:1905369 3.4.25.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006003 292.0
DYD3_k127_652480_5 Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation K03432 GO:0000502,GO:0003674,GO:0003824,GO:0004175,GO:0004298,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005839,GO:0005886,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009405,GO:0009987,GO:0010498,GO:0016020,GO:0016787,GO:0019538,GO:0019773,GO:0019941,GO:0030163,GO:0030312,GO:0032991,GO:0040007,GO:0043170,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044419,GO:0044424,GO:0044464,GO:0051603,GO:0051704,GO:0070003,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1905368,GO:1905369 3.4.25.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001548 283.0
DYD3_k127_652480_6 Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA K07442 GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016426,GO:0016429,GO:0016740,GO:0016741,GO:0030488,GO:0031515,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234 2.1.1.219,2.1.1.220 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002671 280.0
DYD3_k127_652480_7 Protein of unknown function (DUF3866) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001248 280.0
DYD3_k127_652480_8 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000003938 250.0
DYD3_k127_652480_9 Zn peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000008563 232.0
DYD3_k127_6625400_0 Acyl-CoA dehydrogenase, N-terminal domain K11731 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009223 496.0
DYD3_k127_6625400_1 Acyl-CoA dehydrogenase, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 445.0
DYD3_k127_6625400_2 SH3 domain of SH3b2 type - - - 0.0002275 51.0
DYD3_k127_6659260_0 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001403 277.0
DYD3_k127_6659260_1 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001794 278.0
DYD3_k127_6659260_10 PFAM Protein kinase domain K08884 - 2.7.11.1 0.0003438 51.0
DYD3_k127_6659260_2 PAS fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000004649 254.0
DYD3_k127_6659260_3 Glycogen debranching enzyme - - - 0.000000000000000000000000000000000000000000000000000000001139 215.0
DYD3_k127_6659260_4 Glycogen debranching enzyme - - - 0.000000000000000000000000000000000000000000000000008249 198.0
DYD3_k127_6659260_5 Prenyltransferase and squalene oxidase repeat - - - 0.000000000000000000000000000009608 136.0
DYD3_k127_6659260_6 PFAM ABC transporter K01990 - - 0.00000000000000000000000000002112 125.0
DYD3_k127_6659260_7 B-1 B cell differentiation - - - 0.000000000000000000000000005233 122.0
DYD3_k127_6659260_8 COG0842 ABC-type multidrug transport system, permease component K01992 - - 0.00000000003409 76.0
DYD3_k127_6659260_9 PFAM Coenzyme PQQ synthesis protein D (PqqD) - - - 0.00000000004365 66.0
DYD3_k127_6659712_0 Glutamate synthase K00265,K00284 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006541,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0015930,GO:0016020,GO:0016053,GO:0016491,GO:0016638,GO:0019676,GO:0019740,GO:0019752,GO:0040007,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.13,1.4.1.14,1.4.7.1 0.0 1337.0
DYD3_k127_6659712_1 AAA domain - - - 2.431e-241 785.0
DYD3_k127_6659712_10 Lysylphosphatidylglycerol synthase TM region K07027,K14205,K20468 - 2.3.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008783 306.0
DYD3_k127_6659712_11 PFAM Fatty acid desaturase K00507 - 1.14.19.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001743 300.0
DYD3_k127_6659712_12 PFAM Bacterial regulatory protein, arsR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007194 292.0
DYD3_k127_6659712_13 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000356 297.0
DYD3_k127_6659712_14 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002487 284.0
DYD3_k127_6659712_15 Truncated hemoglobins K06886 - - 0.000000000000000000000000000000000000000000000000000000000000000002275 230.0
DYD3_k127_6659712_17 DNA-binding transcriptional activator of the SARP family - - - 0.0000000000000000000000000000000000000000000000000000001115 207.0
DYD3_k127_6659712_18 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000000000000000000000000002125 192.0
DYD3_k127_6659712_19 Iron-binding zinc finger CDGSH type - - - 0.0000000000000000000000000000000000000000000000000001929 196.0
DYD3_k127_6659712_2 PFAM Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001582 526.0
DYD3_k127_6659712_20 Glycosyl transferase family 2 K11936,K14666 - - 0.00000000000000000000000000000000000000000000000004819 198.0
DYD3_k127_6659712_21 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000003467 194.0
DYD3_k127_6659712_22 ANTAR - - - 0.0000000000000000000000000000000000000000000005614 178.0
DYD3_k127_6659712_23 Multicopper oxidase K22348 - 1.16.3.3 0.00000000000000000000000000000000000000000006359 173.0
DYD3_k127_6659712_24 transcription factor binding - - - 0.00000000000000000000000000000000000000001949 167.0
DYD3_k127_6659712_25 transcriptional - - - 0.00000000000000000000000000000000000000053 151.0
DYD3_k127_6659712_26 IMP dehydrogenase activity K02902 - - 0.00000000000000000000000000000003071 131.0
DYD3_k127_6659712_27 membrane - - - 0.000000000000000000000000000002384 132.0
DYD3_k127_6659712_28 Transcriptional regulator - - - 0.00000000000000000000000008798 109.0
DYD3_k127_6659712_29 Virulence activator alpha C-term - - - 0.00000000000000000000003599 108.0
DYD3_k127_6659712_3 Cytochrome P450 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005284 425.0
DYD3_k127_6659712_30 'Cold-shock' DNA-binding domain K03704 - - 0.0000000000000000000004817 99.0
DYD3_k127_6659712_31 ANTAR - - - 0.00000000003788 67.0
DYD3_k127_6659712_33 Sortase family - - - 0.0000000000876 75.0
DYD3_k127_6659712_34 antisigma factor binding K06378 - - 0.000000006595 66.0
DYD3_k127_6659712_35 - - - - 0.00000002747 58.0
DYD3_k127_6659712_36 - - - - 0.00000002747 58.0
DYD3_k127_6659712_37 - - - - 0.00000002759 59.0
DYD3_k127_6659712_38 - - - - 0.000001267 53.0
DYD3_k127_6659712_39 Psort location Cytoplasmic, score 8.96 - - - 0.0005687 47.0
DYD3_k127_6659712_4 COGs COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 382.0
DYD3_k127_6659712_5 Fatty acid desaturase K03921 - 1.14.19.11,1.14.19.2,1.14.19.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002904 355.0
DYD3_k127_6659712_6 PFAM beta-lactamase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002092 339.0
DYD3_k127_6659712_7 Protein of unknown function (DUF3494) K11904 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003198 340.0
DYD3_k127_6659712_8 Peptidase S8 and S53 subtilisin kexin sedolisin K17734 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 346.0
DYD3_k127_6659712_9 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001437 323.0
DYD3_k127_6675770_0 PFAM TadE family protein - - - 0.0000009124 61.0
DYD3_k127_6677530_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003864 570.0
DYD3_k127_6677530_1 Ppx/GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000000000000001004 244.0
DYD3_k127_6677530_10 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.0000000000000000000002381 104.0
DYD3_k127_6677530_12 septum formation initiator K13052 - - 0.00000000002394 77.0
DYD3_k127_6677530_2 response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000001243 249.0
DYD3_k127_6677530_3 Phosphate acyltransferases K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000003223 190.0
DYD3_k127_6677530_4 - - - - 0.000000000000000000000000000000000000000000009287 175.0
DYD3_k127_6677530_5 Cytidylyltransferase family K00981 - 2.7.7.41 0.0000000000000000000000000000000000000000001339 170.0
DYD3_k127_6677530_6 Protein of unknown function (DUF501) K09009 - - 0.000000000000000000000000000000000291 143.0
DYD3_k127_6677530_7 Histidine kinase-like ATPases - - - 0.000000000000000000000000000000004086 138.0
DYD3_k127_6677530_8 von willebrand factor, type A K20276 - - 0.000000000000000000000000001185 127.0
DYD3_k127_6677530_9 Ribosomal protein S1 K07570,K07571 - - 0.00000000000000000000000001778 112.0
DYD3_k127_6683852_0 ATP dependent DNA ligase C terminal region K01971,K10747 GO:0000166,GO:0000287,GO:0000726,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0003896,GO:0003899,GO:0003909,GO:0003910,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0004652,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006266,GO:0006269,GO:0006281,GO:0006302,GO:0006303,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008144,GO:0008150,GO:0008152,GO:0008296,GO:0008297,GO:0008310,GO:0008408,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016874,GO:0016886,GO:0016895,GO:0017076,GO:0018130,GO:0019438,GO:0030145,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032774,GO:0033554,GO:0034061,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0070566,GO:0071704,GO:0071897,GO:0071944,GO:0090304,GO:0090305,GO:0097159,GO:0097367,GO:0097747,GO:0140097,GO:0140098,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576 6.5.1.1,6.5.1.6,6.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004681 499.0
DYD3_k127_6683852_1 Protein tyrosine kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000006625 236.0
DYD3_k127_6683852_2 MEDS: MEthanogen/methylotroph, DcmR Sensory domain - - - 0.00000000000000000000000000000000000000000000000000000000000002566 226.0
DYD3_k127_6683852_3 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.00000000000000000000000000000000000001989 161.0
DYD3_k127_6683852_4 Helix-turn-helix domain - - - 0.0000000000000000000000000001473 119.0
DYD3_k127_6683852_5 Acetyltransferase (GNAT) family - - - 0.0000000000000001015 89.0
DYD3_k127_6684106_0 belongs to the sigma-70 factor family K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001674 560.0
DYD3_k127_6684106_1 PFAM Transposase, IS116 IS110 IS902 K07486 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 337.0
DYD3_k127_6684106_2 PFAM YibE F-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001926 287.0
DYD3_k127_6684106_3 - K01406 - 3.4.24.40 0.000000000000000000000000000000000000000000000000000001414 211.0
DYD3_k127_6684106_4 Hemerythrin hhe cation binding - - - 0.000000000000000000000000000000002095 136.0
DYD3_k127_6684106_5 Dodecin K09165 - - 0.000000000000000000000002226 109.0
DYD3_k127_6684106_6 SMP-30/Gluconolaconase/LRE-like region - - - 0.00000000000000000001088 108.0
DYD3_k127_6684106_7 - - - - 0.000000001293 68.0
DYD3_k127_6703037_0 PFAM sugar transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002557 301.0
DYD3_k127_6703037_1 Aminotransferase class-III K01845,K07257,K21585 - 2.6.1.111,5.4.3.8 0.000000000000000000000000000000000000000000000000000000002264 209.0
DYD3_k127_6703037_2 Glycosyl transferase WecB/TagA/CpsF family K05946 - 2.4.1.187 0.000000000000000000000002946 106.0
DYD3_k127_6703037_3 polysaccharide biosynthetic process - - - 0.0000000000000000000008102 112.0
DYD3_k127_6703037_4 -O-antigen - - - 0.000007113 59.0
DYD3_k127_6713828_0 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 GO:0003674,GO:0003824,GO:0004518,GO:0004550,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006464,GO:0006468,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016787,GO:0016788,GO:0018995,GO:0019205,GO:0019538,GO:0019637,GO:0033643,GO:0033646,GO:0033647,GO:0033648,GO:0034641,GO:0036211,GO:0042025,GO:0043170,GO:0043412,GO:0043656,GO:0043657,GO:0044215,GO:0044216,GO:0044217,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0044464,GO:0046483,GO:0046777,GO:0046939,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072527,GO:0090304,GO:0090305,GO:1901360,GO:1901564 2.7.4.6 0.00000000000000000000000000000000000000000000000000000001576 201.0
DYD3_k127_6713828_1 Belongs to the UPF0758 family K03630 - - 0.00000000000000000000000000000000000000000000001493 180.0
DYD3_k127_671741_0 PFAM Myo-inositol-1-phosphate synthase K01858 GO:0003674,GO:0003824,GO:0004512,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009405,GO:0009987,GO:0010125,GO:0010126,GO:0016137,GO:0016138,GO:0016853,GO:0016872,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044272,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0051704,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1901657,GO:1901659 5.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001974 545.0
DYD3_k127_671741_1 PFAM glycosyl transferase, family 51 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005161 440.0
DYD3_k127_671741_10 Family of unknown function (DUF5318) - - - 0.000000000000000000000000000416 119.0
DYD3_k127_671741_11 PFAM Methyltransferase domain K00568 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016020,GO:0016740,GO:0016741,GO:0032259,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 2.1.1.222,2.1.1.64 0.0000000000000000000000007025 116.0
DYD3_k127_671741_12 tRNA nucleotidyltransferase poly(A) polymerase K00970,K00974 - 2.7.7.19,2.7.7.72 0.00000000000000000001912 93.0
DYD3_k127_671741_13 signal peptide processing - - - 0.0000000000000002752 83.0
DYD3_k127_671741_15 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 0.000000000002566 67.0
DYD3_k127_671741_16 Periplasmic binding protein - - - 0.0000008777 61.0
DYD3_k127_671741_2 ATPase activity K15073 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000473 296.0
DYD3_k127_671741_3 Patatin-like phospholipase K07001 - - 0.00000000000000000000000000000000000000000000000000000000000007297 225.0
DYD3_k127_671741_4 ATPases associated with a variety of cellular activities K01995,K01996 - - 0.00000000000000000000000000000000000000000000000000000000001081 224.0
DYD3_k127_671741_5 Superoxide dismutase K00518 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.15.1.1 0.000000000000000000000000000000000000000000000000000002553 195.0
DYD3_k127_671741_6 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000008518 185.0
DYD3_k127_671741_7 Transcriptional regulator - - - 0.00000000000000000000000000000000000007841 151.0
DYD3_k127_671741_8 Glycosyltransferase family 87 - - - 0.0000000000000000000000000000001119 142.0
DYD3_k127_671741_9 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000007709 128.0
DYD3_k127_6718491_0 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003996 542.0
DYD3_k127_6718491_1 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002433 378.0
DYD3_k127_6718491_2 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001788 276.0
DYD3_k127_6718491_3 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.00000000000000000000000000000000000000000000000000000004325 204.0
DYD3_k127_6718491_4 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.0000000000000000000000000000000000000000000000000000001322 201.0
DYD3_k127_6718491_5 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000000007067 184.0
DYD3_k127_6718491_6 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000001685 167.0
DYD3_k127_6718491_7 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.00000000000000000000000000000000000000008353 170.0
DYD3_k127_6718491_8 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 GO:0005575,GO:0005618,GO:0005623,GO:0008150,GO:0030312,GO:0040007,GO:0044464,GO:0071944 2.7.7.6 0.0000000000000000000003735 100.0
DYD3_k127_6718491_9 Domain of unknown function (DUF4328) - - - 0.00000000001139 77.0
DYD3_k127_6733431_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 3.676e-283 884.0
DYD3_k127_6733431_1 Peptidase S8 and S53 subtilisin kexin sedolisin K17734 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002361 298.0
DYD3_k127_6733431_2 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000001245 178.0
DYD3_k127_6733431_3 Peptidase family S51 K13282 - 3.4.15.6 0.00000000003654 73.0
DYD3_k127_6733431_4 TIR domain - - - 0.0000005783 57.0
DYD3_k127_6744927_0 Cobyrinic acid ac-diamide synthase K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001636 324.0
DYD3_k127_6744927_1 Belongs to the TPP enzyme family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003156 330.0
DYD3_k127_6744927_2 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 GO:0008150,GO:0040007 1.4.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009156 323.0
DYD3_k127_6744927_3 Tfp pilus assembly protein FimV - - - 0.00000000000000000001881 99.0
DYD3_k127_6744927_4 Major facilitator Superfamily - - - 0.0000000000001228 76.0
DYD3_k127_6744927_5 - - - - 0.0003731 53.0
DYD3_k127_6744927_6 Luciferase-like monooxygenase - - - 0.0008887 51.0
DYD3_k127_6756390_0 cobalamin transport - - - 0.000000000000005892 87.0
DYD3_k127_6756390_1 Transposase IS116 IS110 IS902 family protein - - - 0.000000000002485 68.0
DYD3_k127_6781911_0 acyl-CoA dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006041 285.0
DYD3_k127_6781911_1 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000002945 269.0
DYD3_k127_6781911_2 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000004004 245.0
DYD3_k127_6781911_3 Acyl-CoA dehydrogenase, middle domain - - - 0.000000000000000000000000000000000000000000000619 172.0
DYD3_k127_6781911_4 adenosyltransferase K00798 - 2.5.1.17 0.000000000000000000000000000000000000001679 157.0
DYD3_k127_6781911_5 O-Antigen ligase - - - 0.000000000000000000000000000000000001555 155.0
DYD3_k127_6781911_6 Domain of unknown function DUF11 - - - 0.0000000000000004939 88.0
DYD3_k127_6781911_7 Domain of unknown function (DUF4399) - - - 0.0000000009058 69.0
DYD3_k127_6798697_0 TIGRFAM MazG family protein K02428,K02499 - 3.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000003205 251.0
DYD3_k127_6798697_1 SCP-2 sterol transfer family - - - 0.00000000000000000000000000000000000000000000000000000000000000001403 242.0
DYD3_k127_6798697_10 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.00006917 55.0
DYD3_k127_6798697_2 Peptidase family S51 - - - 0.00000000000000000000000000000000000132 157.0
DYD3_k127_6798697_3 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000005567 136.0
DYD3_k127_6798697_4 Putative esterase - - - 0.00000000000000000000000000000001708 141.0
DYD3_k127_6798697_5 - - - - 0.000000000000000000000002399 106.0
DYD3_k127_6798697_6 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000001029 102.0
DYD3_k127_6798697_7 TIGRFAM peptidase S26B, signal peptidase K13280 - 3.4.21.89 0.0000000000000000000001056 108.0
DYD3_k127_6798697_8 PFAM thioesterase superfamily protein K02614 - - 0.0000000000000001035 85.0
DYD3_k127_6798697_9 Histidine kinase - - - 0.00001639 54.0
DYD3_k127_679942_0 Belongs to the ABC transporter superfamily K02032,K10823 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004242 445.0
DYD3_k127_679942_1 Belongs to the ABC transporter superfamily K02031 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002988 366.0
DYD3_k127_679942_2 Binding-protein-dependent transport system inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006321 306.0
DYD3_k127_679942_3 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000001795 210.0
DYD3_k127_679942_4 PFAM HNH endonuclease - - - 0.00000000000000000000000000000000000000000000000000004435 199.0
DYD3_k127_679942_5 Belongs to the MraZ family K03925 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0040007,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.0000000000000000000000004554 109.0
DYD3_k127_6804855_0 DEAD-like helicases superfamily K03724,K06877 - - 0.0 1742.0
DYD3_k127_6804855_1 peptidase M36 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004308 608.0
DYD3_k127_6804855_10 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000001868 214.0
DYD3_k127_6804855_11 Restriction endonuclease K07448 - - 0.0000000000000000000000000000000000000000000000000002019 200.0
DYD3_k127_6804855_12 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000002235 194.0
DYD3_k127_6804855_13 glyoxalase bleomycin resistance protein dioxygenase - GO:0008150,GO:0010035,GO:0010038,GO:0042221,GO:0046686,GO:0050896 - 0.00000000000000000000000000000000000000000001129 179.0
DYD3_k127_6804855_14 Uncharacterized protein conserved in bacteria (DUF2236) - - - 0.000000000000000000000000000000000000000005841 168.0
DYD3_k127_6804855_15 PFAM Thioesterase superfamily - - - 0.00000000000000000000000000000000000002956 149.0
DYD3_k127_6804855_16 Domain of unknown function (DUF4118) K13924 - 2.1.1.80,3.1.1.61 0.00000000000000000000000000000000009584 151.0
DYD3_k127_6804855_17 PFAM Metallophosphoesterase - - - 0.0000000000000000000000000004865 130.0
DYD3_k127_6804855_18 - - - - 0.000000000000000000002872 106.0
DYD3_k127_6804855_19 polygalacturonase activity - - - 0.0000000000000001146 93.0
DYD3_k127_6804855_2 Flavin containing amine oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 449.0
DYD3_k127_6804855_20 - - - - 0.0000000000008386 76.0
DYD3_k127_6804855_21 belongs to the sigma-70 factor family, ECF subfamily K03088 - - 0.000000000002662 68.0
DYD3_k127_6804855_22 Subtilase family K14743 - - 0.000001998 59.0
DYD3_k127_6804855_23 exo-alpha-(2->6)-sialidase activity - - - 0.00005558 55.0
DYD3_k127_6804855_3 Domain of unknown function (DUF1929) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001641 349.0
DYD3_k127_6804855_4 Short-chain dehydrogenase reductase sdr K00046 - 1.1.1.69 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001498 325.0
DYD3_k127_6804855_5 Glycogen debranching enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006427 278.0
DYD3_k127_6804855_6 A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics K18455 GO:0003674,GO:0005488,GO:0006790,GO:0008150,GO:0008152,GO:0008270,GO:0009636,GO:0009987,GO:0010126,GO:0010127,GO:0016137,GO:0042221,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0050896,GO:0051186,GO:0071704,GO:0098754,GO:1901135,GO:1901657 3.5.1.115 0.000000000000000000000000000000000000000000000000000000000000000000000000000009836 269.0
DYD3_k127_6804855_7 Domain of unknown function (DUF1731) K07071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002052 265.0
DYD3_k127_6804855_8 Multicopper oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007551 273.0
DYD3_k127_6804855_9 metal-dependent phosphohydrolase, HD sub domain K07814 - - 0.0000000000000000000000000000000000000000000000000000000000000000004708 243.0
DYD3_k127_6847691_0 Transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000006803 172.0
DYD3_k127_6847691_1 S-layer homology domain - - - 0.00000000000000000000000000005587 135.0
DYD3_k127_6847691_2 Right handed beta helix region - - - 0.00000000006671 76.0
DYD3_k127_6891018_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 9.766e-312 970.0
DYD3_k127_6891018_1 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001358 264.0
DYD3_k127_6891018_2 Helix-turn-helix domain - - - 0.0000000000000000000000000000000000001597 149.0
DYD3_k127_6891018_3 Predicted membrane protein (DUF2231) - - - 0.0000000000005114 78.0
DYD3_k127_6949312_0 Adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000001786 256.0
DYD3_k127_7090261_0 (ABC) transporter - - - 0.000000000000000000000000000000000006184 154.0
DYD3_k127_7090261_1 Lactonase, 7-bladed beta-propeller - - - 0.0000000008359 71.0
DYD3_k127_7090261_2 asparagine K01953 - 6.3.5.4 0.0000002996 63.0
DYD3_k127_7090261_3 Transglutaminase-like superfamily - - - 0.000004607 55.0
DYD3_k127_7118640_0 PFAM AMP-dependent synthetase and ligase K01897,K18661 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004024 597.0
DYD3_k127_7118640_1 type II secretion system protein E K02652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002292 561.0
DYD3_k127_7118640_10 Prephenate dehydratase K04518 - 4.2.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000102 259.0
DYD3_k127_7118640_11 acyl-CoA dehydrogenase K06446 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001562 259.0
DYD3_k127_7118640_12 Protein phosphatase 2C K20074 GO:0000287,GO:0001932,GO:0001933,GO:0003674,GO:0003824,GO:0004647,GO:0004721,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0006464,GO:0006469,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009892,GO:0009987,GO:0010563,GO:0010605,GO:0016020,GO:0016021,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019220,GO:0019222,GO:0019538,GO:0030145,GO:0030312,GO:0031224,GO:0031226,GO:0031323,GO:0031324,GO:0031399,GO:0031400,GO:0032268,GO:0032269,GO:0033673,GO:0036211,GO:0042325,GO:0042326,GO:0042578,GO:0043085,GO:0043086,GO:0043167,GO:0043169,GO:0043170,GO:0043392,GO:0043412,GO:0043549,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0045859,GO:0045936,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051098,GO:0051100,GO:0051101,GO:0051171,GO:0051172,GO:0051174,GO:0051246,GO:0051248,GO:0051338,GO:0051348,GO:0060255,GO:0065007,GO:0065009,GO:0071704,GO:0071944,GO:0080090,GO:0140096,GO:1901564 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000004948 252.0
DYD3_k127_7118640_13 PFAM glutamine amidotransferase class-I K01658 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000684 249.0
DYD3_k127_7118640_14 AIR carboxylase K06898 - - 0.00000000000000000000000000000000000000000000000000000000002965 231.0
DYD3_k127_7118640_15 Bacterial protein of unknown function (DUF881) - - - 0.00000000000000000000000000000000000000002648 161.0
DYD3_k127_7118640_16 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000001698 162.0
DYD3_k127_7118640_17 PFAM Fibronectin type III domain - - - 0.000000000000000000000000000000000000002632 169.0
DYD3_k127_7118640_18 Protein of unknown function (DUF2662) - GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944,GO:0097159,GO:1901363 - 0.00000000000000000000000000000000000001881 153.0
DYD3_k127_7118640_19 nucleotidyltransferase activity - - - 0.0000000000000000000000000000000000554 137.0
DYD3_k127_7118640_2 Penicillin amidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004977 544.0
DYD3_k127_7118640_20 Sortase family K07284 - 3.4.22.70 0.000000000000000000000000000006105 129.0
DYD3_k127_7118640_21 Inner membrane component of T3SS, cytoplasmic domain - GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0009987,GO:0016020,GO:0040007,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044403,GO:0044419,GO:0044464,GO:0050896,GO:0051301,GO:0051704,GO:0071944 - 0.0000000000000000000000000004164 119.0
DYD3_k127_7118640_22 Protein of unknown function (DUF4446) - - - 0.000000000000000000004411 101.0
DYD3_k127_7118640_23 Alpha-lytic protease prodomain K18546 - - 0.0000000000000005358 92.0
DYD3_k127_7118640_24 LVIVD repeat - - - 0.00000000000000843 88.0
DYD3_k127_7118640_25 Protein of unknown function DUF86 - - - 0.000000001102 68.0
DYD3_k127_7118640_26 metal-dependent phosphoesterases (PHP family) - - - 0.00000006547 64.0
DYD3_k127_7118640_27 Mannosyltransferase (PIG-V) - - - 0.0000262 57.0
DYD3_k127_7118640_3 PFAM peptidase S45 penicillin amidase K01434 - 3.5.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001691 487.0
DYD3_k127_7118640_4 PFAM penicillin-binding protein transpeptidase K05364 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005419 392.0
DYD3_k127_7118640_5 Cell cycle protein K03588 GO:0002682,GO:0002684,GO:0008150,GO:0009605,GO:0009607,GO:0009987,GO:0035821,GO:0043207,GO:0044003,GO:0044403,GO:0044419,GO:0048518,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050896,GO:0051301,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0052031,GO:0052173,GO:0052200,GO:0052255,GO:0052552,GO:0052553,GO:0052555,GO:0052556,GO:0052564,GO:0052572,GO:0065007,GO:0075136 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002174 379.0
DYD3_k127_7118640_6 Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes K09121 - 4.99.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001778 360.0
DYD3_k127_7118640_7 Serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002069 357.0
DYD3_k127_7118640_8 Alcohol dehydrogenase GroES-like domain K00004 - 1.1.1.303,1.1.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007972 323.0
DYD3_k127_7118640_9 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944 6.1.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000004725 257.0
DYD3_k127_813037_0 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002258 430.0
DYD3_k127_813037_1 Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2- acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway K15521 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008150,GO:0008152,GO:0008194,GO:0008375,GO:0009058,GO:0009987,GO:0010125,GO:0010126,GO:0016137,GO:0016138,GO:0016740,GO:0016757,GO:0016758,GO:0044237,GO:0044249,GO:0044272,GO:0044424,GO:0044444,GO:0044464,GO:0051186,GO:0051188,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1901657,GO:1901659 2.4.1.250 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006018 384.0
DYD3_k127_813037_10 Putative bacterial sensory transduction regulator - - - 0.000000000000000000001191 109.0
DYD3_k127_813037_11 Proline dehydrogenase K00318 - - 0.000001536 51.0
DYD3_k127_813037_12 peptidyl-tyrosine sulfation - - - 0.00002363 56.0
DYD3_k127_813037_2 L-asparaginase II - - - 0.00000000000000000000000000000000000000000000000000000000001598 217.0
DYD3_k127_813037_3 HD domain - - - 0.00000000000000000000000000000000000000000000000000002211 196.0
DYD3_k127_813037_4 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000007348 156.0
DYD3_k127_813037_5 Transcriptional regulator - - - 0.00000000000000000000000000000000004931 141.0
DYD3_k127_813037_6 - - - - 0.0000000000000000000000000000002364 133.0
DYD3_k127_813037_7 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins - - - 0.0000000000000000000000004721 111.0
DYD3_k127_813037_8 GGDEF domain K01768,K20977 - 4.6.1.1 0.00000000000000000000001521 108.0
DYD3_k127_813037_9 lactoylglutathione lyase activity - - - 0.000000000000000000001128 101.0
DYD3_k127_836338_0 PFAM Nucleotidyl transferase K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003881 472.0
DYD3_k127_836338_1 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 372.0
DYD3_k127_836338_2 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 293.0
DYD3_k127_836338_3 TIGRFAM cell envelope-related function transcriptional attenuator - - - 0.0000000000000000000000000000000000000000000000004922 193.0
DYD3_k127_836338_4 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008831,GO:0009058,GO:0009059,GO:0009225,GO:0009226,GO:0009987,GO:0016051,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019305,GO:0019438,GO:0033692,GO:0034637,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044271,GO:0044281,GO:0045226,GO:0046379,GO:0046383,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901576 1.1.1.133 0.000000000000000000000007388 115.0
DYD3_k127_836338_5 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.0005311 42.0
DYD3_k127_879546_0 Iron-sulfur cluster assembly protein K03593 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004674 407.0
DYD3_k127_879546_1 Nucleotidyl transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 411.0
DYD3_k127_879546_2 Alcohol dehydrogenase GroES-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001903 371.0
DYD3_k127_879546_3 Transglutaminase-like superfamily - - - 0.00000000000000000000000000000000000000000000006512 178.0
DYD3_k127_879546_4 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000002075 175.0
DYD3_k127_879546_5 Putative restriction endonuclease - - - 0.000000000000000000000000000000000000000006191 161.0
DYD3_k127_879546_6 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K03741 - 1.20.4.1 0.000000000000000000000000000002127 127.0
DYD3_k127_879546_7 - - - - 0.00000000000001725 80.0
DYD3_k127_879546_8 Acid phosphatase homologues K19302 - 3.6.1.27 0.00000000000007318 81.0
DYD3_k127_879546_9 Protein tyrosine kinase - - - 0.000000003044 69.0
DYD3_k127_956527_0 cellulose binding - - - 0.0000000000000000000000000000000000000000000000000009749 212.0
DYD3_k127_961260_0 ABC transporter K06022,K06158,K10834 - 3.6.3.29,3.6.3.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005031 566.0
DYD3_k127_961260_1 Cysteine synthase K21148 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019344,GO:0019752,GO:0019842,GO:0030170,GO:0032991,GO:0033847,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.113 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008657 397.0
DYD3_k127_961260_2 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003505 295.0
DYD3_k127_961260_3 Provides the (R)-glutamate required for cell wall biosynthesis K01776 GO:0000270,GO:0003674,GO:0003824,GO:0004857,GO:0005575,GO:0005623,GO:0005886,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008657,GO:0008881,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0010911,GO:0016020,GO:0016853,GO:0016854,GO:0016855,GO:0030203,GO:0030234,GO:0032780,GO:0034645,GO:0036361,GO:0042030,GO:0042546,GO:0043086,GO:0043170,GO:0043462,GO:0044036,GO:0044038,GO:0044085,GO:0044092,GO:0044237,GO:0044249,GO:0044260,GO:0044464,GO:0047661,GO:0050790,GO:0051336,GO:0051346,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:0072586,GO:0098772,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:2000371,GO:2000372 5.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000003226 272.0
DYD3_k127_961260_4 Beta-lactamase superfamily domain - GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0031123,GO:0034414,GO:0034470,GO:0034641,GO:0034660,GO:0040007,GO:0042779,GO:0042780,GO:0042781,GO:0043170,GO:0043628,GO:0044237,GO:0044238,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1905267 - 0.0000000000000000000000000000000000000000000000000003463 202.0
DYD3_k127_961260_5 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.0000000000000000000000000000000000000000000000000009038 199.0
DYD3_k127_961260_6 PFAM thiamineS protein K03636 GO:0000096,GO:0000097,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0019344,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 - 0.0000000000000000000000000000000001178 134.0
DYD3_k127_961260_7 Mov34 MPN PAD-1 family K21140 - 3.13.1.6 0.0000000000000000000000001201 115.0
DYD3_k127_961260_8 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.000000004605 60.0