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Overview

ID MAG00958
Name DYD3_bin.3
Sample SMP0027
Taxonomy
Kingdom Bacteria
Phylum Desulfobacterota_B
Class Binatia
Order UBA9968
Family UBA9968
Genus DP-20
Species
Assembly information
Completeness (%) 75.87
Contamination (%) 4.96
GC content (%) 58.0
N50 (bp) 11,212
Genome size (bp) 3,264,194

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2987

Gene name Description KEGG GOs EC E-value Score Sequence
DYD3_k127_1013991_0 TIR domain - - - 0.00000000000000000000000000000000007348 147.0
DYD3_k127_1013991_1 Probable zinc-ribbon domain - - - 0.000000000000000000000000000003729 126.0
DYD3_k127_1013991_2 Peptidyl-prolyl cis-trans K01802,K03772 - 5.2.1.8 0.0000000000168 69.0
DYD3_k127_1013991_3 Belongs to the peptidase S1C family K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.00007583 54.0
DYD3_k127_1013991_4 Protein of unknown function (DUF4019) K12132 - 2.7.11.1 0.0004035 45.0
DYD3_k127_1031788_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006449 570.0
DYD3_k127_1031788_1 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000007029 197.0
DYD3_k127_1031788_2 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000003471 189.0
DYD3_k127_1031788_3 PFAM luciferase-like - - - 0.00000000000000000000000000000000009202 142.0
DYD3_k127_1031788_4 phosphatase activity K05967 - - 0.00000000000000000000000017 111.0
DYD3_k127_1031788_5 Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione K01759 GO:0003674,GO:0003824,GO:0004462,GO:0006518,GO:0006575,GO:0006749,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016846,GO:0034641,GO:0043603,GO:0044237,GO:0051186,GO:0071704,GO:1901564 4.4.1.5 0.000000000000000000000007245 107.0
DYD3_k127_1031944_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 6.933e-240 759.0
DYD3_k127_1032300_0 alkylbase DNA N-glycosylase activity K03652 - 3.2.2.21 0.0000000000000000000000000000000000000000000000000000000000000000003638 234.0
DYD3_k127_1032300_1 dienelactone hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000009441 235.0
DYD3_k127_1032300_2 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) - - - 0.000000000000000000000000000004139 127.0
DYD3_k127_1032300_3 ankyrin 3, node of Ranvier (ankyrin G) - - - 0.0000000000000000000001749 108.0
DYD3_k127_1032300_4 NMT1-like family K02051 - - 0.000000000000002156 87.0
DYD3_k127_1032300_5 snoRNA binding - - - 0.00000007233 58.0
DYD3_k127_1032300_6 F420H(2)-dependent quinone reductase - GO:0003674,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0016020,GO:0030312,GO:0031406,GO:0036094,GO:0043167,GO:0043168,GO:0043177,GO:0044464,GO:0048037,GO:0050662,GO:0055114,GO:0070967,GO:0071944,GO:0097159,GO:0097367,GO:1901363 - 0.00008761 51.0
DYD3_k127_1032300_7 EamA-like transporter family - - - 0.0001725 52.0
DYD3_k127_1035930_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 1.689e-212 666.0
DYD3_k127_1035930_1 PFAM ABC transporter related K02028 - 3.6.3.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 359.0
DYD3_k127_1035930_2 Extradiol ring-cleavage dioxygenase K04101,K05713 - 1.13.11.16,1.13.11.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000001702 273.0
DYD3_k127_1035930_3 Lytic transglycosylase catalytic K08307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001445 262.0
DYD3_k127_1035930_4 Bacterial periplasmic substrate-binding proteins K02030,K10001 - - 0.0000000000000000000000000000000000000000000000000000000000004562 221.0
DYD3_k127_1035930_5 Uncharacterized protein family UPF0016 - - - 0.0000000000000000000000000000001682 125.0
DYD3_k127_1035930_6 Histidine phosphatase superfamily (branch 1) K03574,K08296 - 3.6.1.55 0.000000000000000000000000003456 118.0
DYD3_k127_1035930_7 - - - - 0.0000000000000000753 83.0
DYD3_k127_1035930_8 Binding-protein-dependent transport system inner membrane component K02029,K10003 - - 0.000006361 48.0
DYD3_k127_1035930_9 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.0001024 46.0
DYD3_k127_1067673_0 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002832 518.0
DYD3_k127_1067673_1 Isocitrate/isopropylmalate dehydrogenase K00030 - 1.1.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003719 430.0
DYD3_k127_1067673_2 ATPases associated with a variety of cellular activities K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002164 250.0
DYD3_k127_1067673_3 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000004179 169.0
DYD3_k127_1067673_4 PFAM OmpA MotB domain protein K03640 - - 0.0000000000000000000000000004068 120.0
DYD3_k127_1067673_5 VanZ like family - - - 0.0000000000000000000001064 104.0
DYD3_k127_1067673_6 Domain of unknown function (DUF309) K09763 - - 0.000000000000000003638 89.0
DYD3_k127_1067673_7 EamA-like transporter family - - - 0.00000000704 64.0
DYD3_k127_1095808_0 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003031 569.0
DYD3_k127_1095808_1 Amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004631 412.0
DYD3_k127_1095808_2 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000005095 123.0
DYD3_k127_1095808_3 Major facilitator superfamily K05819 - - 0.00000000000000006648 93.0
DYD3_k127_1115463_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 7.452e-252 786.0
DYD3_k127_1115463_1 NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003064 590.0
DYD3_k127_1115463_10 Belongs to the LarC family K09121 - 4.99.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005098 308.0
DYD3_k127_1115463_11 Aldo/keto reductase family K00002 - 1.1.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 304.0
DYD3_k127_1115463_12 Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000002049 250.0
DYD3_k127_1115463_13 Glutathione S-transferase, N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000008933 231.0
DYD3_k127_1115463_14 Transmembrane secretion effector K08225 - - 0.0000000000000000000000000000000000000000000000000000000000361 221.0
DYD3_k127_1115463_15 Histone methylation protein DOT1 - - - 0.000000000000000000000000000000000000000000000000000001834 197.0
DYD3_k127_1115463_16 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000004247 192.0
DYD3_k127_1115463_17 Kelch motif - - - 0.0000000000000000000000000000000000000000000000001417 186.0
DYD3_k127_1115463_18 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338,K05580 - 1.6.5.3 0.0000000000000000000000000000000000000000000003438 173.0
DYD3_k127_1115463_19 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000061 165.0
DYD3_k127_1115463_2 COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter MnhA subunit K00341 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000783 570.0
DYD3_k127_1115463_20 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00330 - 1.6.5.3 0.000000000000000000000000000000000000002841 149.0
DYD3_k127_1115463_21 MlaC protein K07323 - - 0.00000000000000000000000000000000000003071 151.0
DYD3_k127_1115463_22 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.0000000000000000000000000000000000005461 145.0
DYD3_k127_1115463_23 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.000000000000000000000000000000000007505 138.0
DYD3_k127_1115463_24 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.00000000000000000000000000000001196 130.0
DYD3_k127_1115463_25 Cytochrome c K12263 - - 0.00000000000000000006223 93.0
DYD3_k127_1115463_26 Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes K09121 - 4.99.1.12 0.000958 45.0
DYD3_k127_1115463_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0016020,GO:0044424,GO:0044464,GO:0071944 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001753 475.0
DYD3_k127_1115463_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004013 426.0
DYD3_k127_1115463_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 GO:0003674,GO:0003824,GO:0003954,GO:0008137,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004177 393.0
DYD3_k127_1115463_6 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 377.0
DYD3_k127_1115463_7 Transketolase, pyrimidine binding domain K21417 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005128 328.0
DYD3_k127_1115463_8 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161,K21416 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001342 314.0
DYD3_k127_1115463_9 Alpha/beta hydrolase of unknown function (DUF1100) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004708 310.0
DYD3_k127_1151728_0 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002674 580.0
DYD3_k127_1151728_1 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006568 419.0
DYD3_k127_1151728_2 Belongs to the glycosyl hydrolase 57 family - - - 0.0000000000000000005871 87.0
DYD3_k127_1172247_0 Nitrile hydratase, alpha chain K01721 - 4.2.1.84 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001755 325.0
DYD3_k127_1172247_1 NHase catalyzes the hydration of various nitrile compounds to the corresponding amides K20807 - 4.2.1.84 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008712 314.0
DYD3_k127_1172247_2 Nitrile hydratase beta subunit - - - 0.00000000000000000000000000000000000000000000000000006611 189.0
DYD3_k127_1172247_3 PFAM Phage derived protein Gp49-like (DUF891) - - - 0.000000000000000000000000000000000000000000002136 166.0
DYD3_k127_1172247_4 Helix-turn-helix domain - - - 0.0000000000000000000000000002593 117.0
DYD3_k127_1172247_5 KR domain K00059 - 1.1.1.100 0.00000000000000003474 83.0
DYD3_k127_1172247_6 Transposase K07491 - - 0.000000000000009225 78.0
DYD3_k127_1173600_0 Maltooligosyl trehalose synthase K06044 - 5.4.99.15 0.0 1052.0
DYD3_k127_1173600_1 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) K01214 - 3.2.1.68 0.0 1044.0
DYD3_k127_1174288_0 Isocitrate dehydrogenase K00031 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.42 2.311e-207 651.0
DYD3_k127_1174288_1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00174 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000583 584.0
DYD3_k127_1174288_2 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000143 404.0
DYD3_k127_1174288_3 Belongs to the ClpA ClpB family K03694 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001511 401.0
DYD3_k127_1174288_4 molybdopterin binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001714 354.0
DYD3_k127_1174288_5 PFAM CBS domain K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000393 329.0
DYD3_k127_1174288_6 Isochorismatase family K09020 - 3.5.1.110 0.0000000000000000000000000000000000000000000000000000002238 201.0
DYD3_k127_1174288_7 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.000000000000000000000000000000002998 134.0
DYD3_k127_1174288_8 PFAM ATP-binding region ATPase domain protein - - - 0.00000000000000000003247 102.0
DYD3_k127_1178678_0 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K16874 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 320.0
DYD3_k127_1178678_1 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000007916 233.0
DYD3_k127_1178678_2 Histone methylation protein DOT1 - - - 0.000000000000000000000000000000000000000007564 164.0
DYD3_k127_1178678_3 NMT1-like family K02051 - - 0.00003504 55.0
DYD3_k127_1216611_0 Rieske [2Fe-2S] domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 351.0
DYD3_k127_1216611_1 4,5-dihydroxyphthalate decarboxylase K04102 - 4.1.1.55 0.0000000000000000000000000000000000000000006677 169.0
DYD3_k127_1216611_2 Class II Aldolase and Adducin N-terminal domain K01628 - 4.1.2.17 0.000000000000000000001281 104.0
DYD3_k127_1216611_3 Bacterial extracellular solute-binding protein K02012 - - 0.000000000000006634 86.0
DYD3_k127_1216611_4 Amidohydrolase K14333 - 4.1.1.46 0.00000000001378 73.0
DYD3_k127_1231276_0 Belongs to the aldehyde dehydrogenase family K13821 - 1.2.1.88,1.5.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008364 551.0
DYD3_k127_1231276_1 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000004426 249.0
DYD3_k127_1231276_2 alpha/beta hydrolase fold K07019 - - 0.00000000000000000000000000000000000000000000000000000000000000000005689 240.0
DYD3_k127_1259987_0 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000001151 141.0
DYD3_k127_1259987_1 protein conserved in bacteria - - - 0.0000000000000000000000000001194 128.0
DYD3_k127_1259987_2 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000007547 114.0
DYD3_k127_1259987_3 protein conserved in bacteria - - - 0.00002848 49.0
DYD3_k127_1263848_0 Amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 310.0
DYD3_k127_1263848_1 dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003222 280.0
DYD3_k127_1263848_2 Belongs to the glutaminase family K01425 - 3.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000009365 247.0
DYD3_k127_1263848_3 Glyoxalase-like domain K01759,K05606 - 4.4.1.5,5.1.99.1 0.000009077 56.0
DYD3_k127_1279124_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1803.0
DYD3_k127_1279124_1 Transglycosylase - - - 2.16e-238 773.0
DYD3_k127_1279124_10 Amidohydrolase K07045 - - 0.0000000000000000000000000001923 128.0
DYD3_k127_1279124_11 coenzyme F420-1:gamma-L-glutamate ligase activity K04719 - 1.13.11.79 0.0000000000000000000000000009516 121.0
DYD3_k127_1279124_12 FR47-like protein - - - 0.00000000000000000000000002466 114.0
DYD3_k127_1279124_13 Protein of unknown function (DUF983) - - - 0.0000000000000000000004736 103.0
DYD3_k127_1279124_14 NMT1-like family - - - 0.00000000005944 73.0
DYD3_k127_1279124_15 DNA mediated transformation K04096 - - 0.0000000001518 70.0
DYD3_k127_1279124_16 - - - - 0.000000002365 61.0
DYD3_k127_1279124_17 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 0.00004754 45.0
DYD3_k127_1279124_2 Binding-protein-dependent transport system inner membrane component K02011 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001941 494.0
DYD3_k127_1279124_3 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002779 315.0
DYD3_k127_1279124_4 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009496 295.0
DYD3_k127_1279124_5 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000002247 265.0
DYD3_k127_1279124_6 DinB superfamily - - - 0.0000000000000000000000000000000000000000000000000000006218 200.0
DYD3_k127_1279124_7 COG2513 PEP phosphonomutase and related enzymes - - - 0.000000000000000000000000000000000000000000000001651 184.0
DYD3_k127_1279124_8 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000005569 158.0
DYD3_k127_1279124_9 Bacterial extracellular solute-binding protein K02012 - - 0.00000000000000000000000000000000002902 149.0
DYD3_k127_1286353_0 Amidohydrolase K03392 - 4.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004235 275.0
DYD3_k127_1286353_1 PFAM Formylglycine-generating sulfatase enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002718 244.0
DYD3_k127_1286353_10 hydroperoxide reductase activity K07486 - - 0.00000000004904 66.0
DYD3_k127_1286353_11 asparagine catabolic process via L-aspartate K13051 GO:0003674,GO:0003824,GO:0004067,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006508,GO:0006520,GO:0006528,GO:0006530,GO:0006558,GO:0006559,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008242,GO:0008798,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009066,GO:0009068,GO:0009072,GO:0009074,GO:0009987,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0017144,GO:0019439,GO:0019538,GO:0019752,GO:0032787,GO:0033345,GO:0034641,GO:0042737,GO:0043170,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0070011,GO:0071704,GO:0072329,GO:0140096,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1902221,GO:1902222 3.4.19.5 0.00002656 46.0
DYD3_k127_1286353_2 Asparaginase K13051 - 3.4.19.5 0.0000000000000000000000000000000000000000000000000000000003721 207.0
DYD3_k127_1286353_3 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000001311 203.0
DYD3_k127_1286353_4 Peptidase family M23 - - - 0.000000000000000000000000000000001472 140.0
DYD3_k127_1286353_5 thiamine-containing compound biosynthetic process K02051 - - 0.000000000000000000000000000007256 131.0
DYD3_k127_1286353_6 Polymer-forming cytoskeletal - - - 0.00000000000000000000147 98.0
DYD3_k127_1286353_7 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000000002854 94.0
DYD3_k127_1286353_8 NMT1-like family K02051 - - 0.000000000000000002845 96.0
DYD3_k127_1286353_9 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K02051 - - 0.000000000001584 78.0
DYD3_k127_1289960_0 PFAM Conserved region in glutamate synthase K00284 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006541,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0015930,GO:0016053,GO:0016491,GO:0016638,GO:0019676,GO:0019740,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.7.1 0.0 2168.0
DYD3_k127_1289960_1 penicillin-binding protein K05366 - 2.4.1.129,3.4.16.4 4.182e-272 860.0
DYD3_k127_1289960_10 Amidohydrolase - - - 0.00000000000006572 83.0
DYD3_k127_1289960_11 PFAM adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.0001194 53.0
DYD3_k127_1289960_2 TIGRFAM glutamate synthases, NADH NADPH, small subunit K00266 - 1.4.1.13,1.4.1.14 2.058e-253 790.0
DYD3_k127_1289960_3 Glutathione S-transferase K07393 GO:0003674,GO:0003824,GO:0004364,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0016491,GO:0016667,GO:0016672,GO:0016740,GO:0016765,GO:0042221,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.8.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 392.0
DYD3_k127_1289960_4 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003379 358.0
DYD3_k127_1289960_5 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000138 284.0
DYD3_k127_1289960_6 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000002388 177.0
DYD3_k127_1289960_7 helix_turn_helix ASNC type K03719 - - 0.00000000000000000000000000000000000005414 148.0
DYD3_k127_1289960_8 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020,K00042 GO:0003674,GO:0003824,GO:0005975,GO:0006082,GO:0008150,GO:0008152,GO:0008679,GO:0009056,GO:0009987,GO:0016052,GO:0016054,GO:0016491,GO:0016614,GO:0016616,GO:0017144,GO:0019392,GO:0019394,GO:0019577,GO:0019579,GO:0019580,GO:0019752,GO:0042737,GO:0042836,GO:0042838,GO:0043436,GO:0043648,GO:0043649,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046392,GO:0046395,GO:0055114,GO:0071704,GO:1901575 1.1.1.31,1.1.1.60 0.00000000000000000000000000000254 130.0
DYD3_k127_1289960_9 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000002534 87.0
DYD3_k127_1297733_0 SMART Resolvase, RNase H domain protein fold K06959 - - 0.0 1136.0
DYD3_k127_1297733_1 ATP-dependent helicase C-terminal K03579 - 3.6.4.13 1.3e-322 1008.0
DYD3_k127_1297733_10 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000008258 193.0
DYD3_k127_1297733_11 Putative peptidoglycan binding domain - - - 0.00000000000000000000000002221 121.0
DYD3_k127_1297733_12 NMT1-like family K02051 - - 0.0000000005682 70.0
DYD3_k127_1297733_13 PFAM PfkB domain protein K00856 - 2.7.1.20 0.00000006263 54.0
DYD3_k127_1297733_2 DNA topoisomerase II activity K03167 - 5.99.1.3 3.198e-298 928.0
DYD3_k127_1297733_3 DNA topoisomerase VI subunit A K03166 - 5.99.1.3 9.326e-204 637.0
DYD3_k127_1297733_4 Protein of unknown function (DUF763) K09003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 607.0
DYD3_k127_1297733_5 Animal haem peroxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000354 563.0
DYD3_k127_1297733_6 Peptidase family M48 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002008 484.0
DYD3_k127_1297733_7 Beta-lactamase class C and other penicillin binding proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001932 319.0
DYD3_k127_1297733_8 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000738 240.0
DYD3_k127_1297733_9 Protein of unknown function (DUF3014) - - - 0.000000000000000000000000000000000000000000000000000000000003275 218.0
DYD3_k127_1302897_0 repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003806 374.0
DYD3_k127_1302897_1 Tyrosine phosphatase family - - - 0.000000000000000000000001259 110.0
DYD3_k127_1302897_2 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000003491 100.0
DYD3_k127_1309902_0 ATP dependent DNA ligase C terminal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001845 483.0
DYD3_k127_1309902_1 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000472 372.0
DYD3_k127_1309902_2 Transcriptional regulator K20968 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006089,GO:0006355,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009438,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0019172,GO:0019219,GO:0019222,GO:0019243,GO:0019249,GO:0019752,GO:0031323,GO:0031326,GO:0032787,GO:0042180,GO:0042182,GO:0043436,GO:0044237,GO:0044248,GO:0044249,GO:0044281,GO:0044282,GO:0044283,GO:0046185,GO:0046394,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0051596,GO:0060255,GO:0061727,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:1901575,GO:1901576,GO:1901615,GO:1901617,GO:1903506,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006165 297.0
DYD3_k127_1327649_0 UPF0365 protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001944 501.0
DYD3_k127_1327649_1 NfeD-like C-terminal, partner-binding K07403 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004292 450.0
DYD3_k127_1327649_11 NMT1/THI5 like K02051 - - 0.000000000000000000000001228 112.0
DYD3_k127_1327649_12 Endoribonuclease L-PSP - - - 0.00000000000000000000114 100.0
DYD3_k127_1327649_13 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000001389 103.0
DYD3_k127_1327649_14 photosynthesis K02656 - - 0.000000000005245 74.0
DYD3_k127_1327649_2 Peptidogalycan biosysnthesis/recognition K09919 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000152 355.0
DYD3_k127_1327649_3 Branched-chain-amino-acid aminotransferase-like protein 3 K18482 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008153,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016053,GO:0019438,GO:0019752,GO:0032787,GO:0042537,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046482,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.3.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003032 342.0
DYD3_k127_1327649_4 ornithine cyclodeaminase K01750 - 4.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002047 341.0
DYD3_k127_1327649_5 Transglycosylase SLT domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003948 261.0
DYD3_k127_1327649_6 Binding-protein-dependent transport system inner membrane component K02050 - - 0.00000000000000000000000000000000000000000000000000000000004916 214.0
DYD3_k127_1327649_7 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.0000000000000000000000000000000000000000000000001279 190.0
DYD3_k127_1327649_9 Protein of unknown function (DUF1178) - - - 0.00000000000000000000000000002085 124.0
DYD3_k127_1350521_0 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000004709 266.0
DYD3_k127_1350521_1 major facilitator superfamily MFS_1 - - - 0.00000000000000000000000000000000000000000000000000000008271 212.0
DYD3_k127_1350521_2 PFAM thiamine pyrophosphate enzyme-like TPP-binding thiamine pyrophosphate K01576,K01652 - 2.2.1.6,4.1.1.7 0.00000000000000004771 82.0
DYD3_k127_1355267_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 2.057e-217 701.0
DYD3_k127_1355267_1 Tripartite tricarboxylate transporter TctA family K07793 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004384 546.0
DYD3_k127_1355267_10 Protein conserved in bacteria K18480 - - 0.000000000000000000000000000000000000000000007514 171.0
DYD3_k127_1355267_11 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000005032 138.0
DYD3_k127_1355267_12 NMT1-like family K07080 - - 0.000000000000000000000000000005524 131.0
DYD3_k127_1355267_13 FAD dependent oxidoreductase - - - 0.00000000000000000000000000000666 125.0
DYD3_k127_1355267_14 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K08234 - - 0.000000001316 64.0
DYD3_k127_1355267_15 - - - - 0.0000003835 57.0
DYD3_k127_1355267_2 DNA photolyase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000886 436.0
DYD3_k127_1355267_3 Belongs to the MlaE permease family K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002831 400.0
DYD3_k127_1355267_4 ABC transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 337.0
DYD3_k127_1355267_5 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001937 276.0
DYD3_k127_1355267_6 Mammalian cell entry related domain protein K02067,K06192 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003861 268.0
DYD3_k127_1355267_7 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000001543 217.0
DYD3_k127_1355267_8 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000003533 210.0
DYD3_k127_1355267_9 Protein of unknown function (DUF456) K09793 - - 0.0000000000000000000000000000000000000000000000000002667 189.0
DYD3_k127_1370239_0 Pterin binding enzyme K00548,K15023 - 2.1.1.13,2.1.1.258 7.21e-219 691.0
DYD3_k127_1450260_0 Tripartite tricarboxylate transporter TctA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000239 390.0
DYD3_k127_1450260_1 Conserved carboxylase domain K01571 - 4.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001896 362.0
DYD3_k127_1450260_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004455 256.0
DYD3_k127_1450260_3 Amidohydrolase K07045 - - 0.0000000000000000000000000000000000000000000000000000000005622 216.0
DYD3_k127_1450260_4 Protein of unknown function (DUF2459) - - - 0.00000000000000000000000000000000003447 142.0
DYD3_k127_1450260_6 THIoesterase K18700 - 3.1.2.29 0.0000000000000000002668 93.0
DYD3_k127_1450260_7 Tripartite tricarboxylate transporter TctA family - - - 0.000000000000578 75.0
DYD3_k127_1456050_0 Nitronate monooxygenase K00459 - 1.13.12.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006091 438.0
DYD3_k127_1456050_1 RNA cap guanine-N2 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008697 304.0
DYD3_k127_1456050_2 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001267 284.0
DYD3_k127_1456050_3 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K01485,K11991 - 3.5.4.1,3.5.4.33 0.00000000000000000000000000000000000000000000000000000000000000000000000008282 259.0
DYD3_k127_1456050_4 B12 binding domain K00548 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006464,GO:0006479,GO:0006520,GO:0006555,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008213,GO:0008270,GO:0008276,GO:0008652,GO:0008705,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0019538,GO:0019752,GO:0019842,GO:0031419,GO:0032259,GO:0034641,GO:0035999,GO:0036094,GO:0036211,GO:0042084,GO:0042558,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046872,GO:0046906,GO:0046914,GO:0048037,GO:0050667,GO:0051186,GO:0071704,GO:0097159,GO:0140096,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.1.13 0.000000000000000000000000000000000000000004083 156.0
DYD3_k127_1456050_5 Toxic component of a toxin-antitoxin (TA) module K07171 GO:0008150,GO:0040008,GO:0045926,GO:0048519,GO:0050789,GO:0065007 - 0.0000000001133 63.0
DYD3_k127_1497578_0 Voltage gated chloride channel K03281 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004592 570.0
DYD3_k127_1497578_1 Putative FMN-binding domain K07734 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002532 287.0
DYD3_k127_1497578_2 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000003118 229.0
DYD3_k127_1497578_3 iron assimilation K07223 - - 0.0000000000000000000000000000000000000000000000000000000000000006327 222.0
DYD3_k127_1497578_4 Haloacid dehalogenase-like hydrolase - GO:0003674,GO:0003824,GO:0003850,GO:0004346,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0042578,GO:0044237,GO:0050308,GO:0050309 - 0.00000000000000000000000000000000000000000000000000000001893 206.0
DYD3_k127_1497578_5 thiamine-containing compound biosynthetic process K02051 - - 0.0000000000000000000000000000000000000001987 163.0
DYD3_k127_1497578_6 Zinc-binding dehydrogenase - - - 0.0002096 46.0
DYD3_k127_1515547_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1073.0
DYD3_k127_1515547_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 1.813e-299 938.0
DYD3_k127_1515547_10 PFAM periplasmic binding protein K02016 - - 0.00000000000000000000000000000000000000000000004608 189.0
DYD3_k127_1515547_11 Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate K02231 - 2.7.1.156,2.7.7.62 0.000000000000000000000000000000000000000000004946 169.0
DYD3_k127_1515547_12 PFAM Auxin Efflux Carrier K07088 - - 0.00000000000000000000000000000000000000000006957 171.0
DYD3_k127_1515547_13 R3H domain protein K06346 - - 0.0000000000000000000000000000000000000006594 158.0
DYD3_k127_1515547_14 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate K02233 - 2.7.8.26 0.00000000000000000000000000000000000001545 158.0
DYD3_k127_1515547_15 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000001794 118.0
DYD3_k127_1515547_16 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.0000000000000000000168 93.0
DYD3_k127_1515547_17 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.00000000000000000002284 102.0
DYD3_k127_1515547_18 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.000000000000000008437 90.0
DYD3_k127_1515547_19 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.000000000000006509 76.0
DYD3_k127_1515547_2 Aminoacyl-tRNA editing domain K01881 - 6.1.1.15 7.258e-226 713.0
DYD3_k127_1515547_20 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.0000000000003004 76.0
DYD3_k127_1515547_21 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate K02233 - 2.7.8.26 0.0000000006049 68.0
DYD3_k127_1515547_22 Domain of unknown function (DUF4430) - - - 0.000003532 55.0
DYD3_k127_1515547_3 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009055,GO:0009058,GO:0009240,GO:0009987,GO:0016020,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0022900,GO:0030312,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044464,GO:0046429,GO:0046490,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0052592,GO:0055114,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004979 535.0
DYD3_k127_1515547_4 AAA domain K02232 - 6.3.5.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001534 543.0
DYD3_k127_1515547_5 Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) K00768 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008939,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0017144,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042364,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.4.2.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003493 367.0
DYD3_k127_1515547_6 TonB dependent receptor K02014,K16092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004124 372.0
DYD3_k127_1515547_7 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001832 347.0
DYD3_k127_1515547_8 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002401 337.0
DYD3_k127_1515547_9 Orotidine 5'-phosphate decarboxylase / HUMPS family K01591 GO:0003674,GO:0003824,GO:0004590,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004658 272.0
DYD3_k127_1517380_0 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 1.494e-199 628.0
DYD3_k127_1517380_1 PFAM YCII-related - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001555 426.0
DYD3_k127_1517380_10 YCII-related domain - - - 0.00003453 46.0
DYD3_k127_1517380_2 C4-dicarboxylate ABC transporter permease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002577 393.0
DYD3_k127_1517380_3 Bacterial protein of unknown function (DUF899) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 352.0
DYD3_k127_1517380_4 3-demethylubiquinone-9 3-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000004682 237.0
DYD3_k127_1517380_5 3-demethylubiquinone-9 3-methyltransferase K04750 - - 0.00000000000000000000000000000000000000000000000000002948 191.0
DYD3_k127_1517380_6 YCII-related domain - - - 0.00000000000000000000000000000000000000000000000000009433 188.0
DYD3_k127_1517380_7 YCII-related domain - - - 0.0000000000000000000000000000000000000001812 153.0
DYD3_k127_1517380_8 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000000000243 111.0
DYD3_k127_1517380_9 YCII-related domain - - - 0.0000000000000000000000004623 108.0
DYD3_k127_1533268_0 - - - - 0.0 1083.0
DYD3_k127_1533268_1 Belongs to the TPP enzyme family K01576,K01652 - 2.2.1.6,4.1.1.7 3.892e-217 690.0
DYD3_k127_1533268_10 - - - - 0.00000001187 58.0
DYD3_k127_1533268_12 Glutathione transferase K21253,K21264,K21265 - 2.5.1.18 0.000007013 57.0
DYD3_k127_1533268_13 UPF0056 membrane protein K05595 - - 0.0002209 47.0
DYD3_k127_1533268_2 PFAM thiamine pyrophosphate enzyme-like TPP-binding thiamine pyrophosphate - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 559.0
DYD3_k127_1533268_3 Phospholipase D. Active site motifs. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005918 420.0
DYD3_k127_1533268_4 Pfam:UPF0118 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002489 389.0
DYD3_k127_1533268_5 Las17-binding protein actin regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004904 260.0
DYD3_k127_1533268_6 Histidine kinase K02660 - - 0.00000000000000000000000000000000000000000000000000000000000000239 241.0
DYD3_k127_1533268_7 alpha beta - - - 0.00000000000000000000000000000000000000008864 162.0
DYD3_k127_1533268_8 Histidine kinase - - - 0.0000000000000000000000000000000000000006516 169.0
DYD3_k127_1533268_9 Thioesterase superfamily K01075 - 3.1.2.23 0.000000000000000000000000000000000001276 144.0
DYD3_k127_1534915_0 TIGRFAM drug resistance transporter, EmrB QacA subfamily K03446 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004058 294.0
DYD3_k127_1534915_1 Methionine synthase vitamin-B12 independent K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003177 285.0
DYD3_k127_1534915_2 TIM-barrel fold metal-dependent hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003079 269.0
DYD3_k127_1534915_3 PFAM secretion protein HlyD family protein K03543 - - 0.000000000000000000000000000000000000000000000003551 187.0
DYD3_k127_1536172_0 Aldehyde oxidase and xanthine dehydrogenase, a b hammerhead domain K03520 - 1.2.5.3 7.258e-214 688.0
DYD3_k127_1536172_1 CO dehydrogenase flavoprotein domain protein K03519 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000005692 254.0
DYD3_k127_1536172_2 COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS CutS homologs K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000007469 241.0
DYD3_k127_1536172_3 COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit K00479,K05708,K14748 - 1.14.12.19 0.000000000000000000000000000000000000000000000000000000000000000005375 235.0
DYD3_k127_1536172_4 PFAM ring hydroxylating dioxygenase, alpha subunit K05708,K14748 - 1.14.12.19 0.00000000000000000000000000000000000000000001158 166.0
DYD3_k127_1536172_5 Ring hydroxylating beta subunit - - - 0.00000000000000000000000000000000000000000002385 167.0
DYD3_k127_1543587_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 0.0 1573.0
DYD3_k127_1543587_1 Aminopeptidase K01256,K08776 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 3.4.11.2 2.613e-216 699.0
DYD3_k127_1543587_2 MacB-like periplasmic core domain K02004 - - 9.531e-208 674.0
DYD3_k127_1543587_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585,K07799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006517 457.0
DYD3_k127_1543587_4 Biotin-lipoyl like K01993 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006883 380.0
DYD3_k127_1543587_5 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001284 282.0
DYD3_k127_1543587_6 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007804 251.0
DYD3_k127_1543587_7 GDSL-like Lipase/Acylhydrolase family K10804 - 3.1.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000003271 247.0
DYD3_k127_1543587_8 transcriptional regulator K09017 - - 0.00000000000000000000000000000000000000000000000000000000000206 216.0
DYD3_k127_1573671_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002843 569.0
DYD3_k127_1573671_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 507.0
DYD3_k127_1573671_10 Domain of unknown function (DUF4416) - - - 0.0000000000000000000000000003017 120.0
DYD3_k127_1573671_11 TIGRFAM preprotein translocase, YajC subunit K03210 - - 0.000000000000000000000003817 109.0
DYD3_k127_1573671_12 peptidyl-tyrosine sulfation - - - 0.000000000000000000000005633 107.0
DYD3_k127_1573671_13 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000002512 91.0
DYD3_k127_1573671_14 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K01598,K13038 - 4.1.1.36,6.3.2.5 0.000001235 51.0
DYD3_k127_1573671_2 single-stranded-DNA-specific exonuclease RecJ K07462 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005026 499.0
DYD3_k127_1573671_3 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007518 458.0
DYD3_k127_1573671_4 NfeD-like C-terminal, partner-binding K07403 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 366.0
DYD3_k127_1573671_5 prohibitin homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001672 348.0
DYD3_k127_1573671_6 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004577 328.0
DYD3_k127_1573671_7 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002412 280.0
DYD3_k127_1573671_8 SecD/SecF GG Motif K03074 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000848 264.0
DYD3_k127_1573671_9 TIGRFAM phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000001136 218.0
DYD3_k127_1576691_0 Belongs to the UbiD family K03182,K16239 - 4.1.1.61,4.1.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000056 622.0
DYD3_k127_1576691_1 UbiA prenyltransferase family K03179 - 2.5.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003706 280.0
DYD3_k127_1576691_2 membrane transporter protein K07090 - - 0.0006968 44.0
DYD3_k127_1577549_0 TRAP transporter, 4TM 12TM fusion protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001987 524.0
DYD3_k127_1577549_1 TRAP transporter, solute receptor (TAXI family K07080 - - 0.0000000000000000000000000000000000000000000000000000000000005478 222.0
DYD3_k127_1577549_2 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.00000000000000000000000000000000000000000000001648 177.0
DYD3_k127_1577549_3 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.00000000000000000000000000000000000000000007914 168.0
DYD3_k127_1577549_4 Smr domain - - - 0.0000000000000000000000000000005517 130.0
DYD3_k127_1577847_0 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001306 429.0
DYD3_k127_1577847_1 Amidohydrolase family K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000002679 257.0
DYD3_k127_1577847_2 RES - - - 0.00000000000000000000000000000000000000000000004902 173.0
DYD3_k127_1577847_3 Bacterial protein of unknown function (DUF853) K06915 - - 0.000000000000000000000000000000000007294 139.0
DYD3_k127_1577847_4 Protein of unknown function (DUF2384) - - - 0.00000000000000000000000000002464 123.0
DYD3_k127_1577847_5 Acetyltransferase (GNAT) domain K03825 - - 0.000000000000000001726 86.0
DYD3_k127_1577969_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07788 - - 0.0 1220.0
DYD3_k127_1577969_1 Biotin-lipoyl like K07799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006883 365.0
DYD3_k127_1577969_2 Putative cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002058 285.0
DYD3_k127_1577969_3 outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000004533 242.0
DYD3_k127_1577969_4 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 0.000000000000000000000000000000000000157 145.0
DYD3_k127_1577969_5 repeat-containing protein - - - 0.0001963 51.0
DYD3_k127_1592310_0 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005844 546.0
DYD3_k127_1592310_1 UDP-N-acetylmuramate-L-alanine ligase activity K01924 - 6.3.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003613 537.0
DYD3_k127_1592310_10 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008963 345.0
DYD3_k127_1592310_11 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001836 332.0
DYD3_k127_1592310_12 Cell wall formation K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000001107 253.0
DYD3_k127_1592310_13 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008765,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000058 243.0
DYD3_k127_1592310_14 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000335 211.0
DYD3_k127_1592310_15 POTRA domain, FtsQ-type K03589 - - 0.0000000000000000000000000000000001234 143.0
DYD3_k127_1592310_16 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.000000000000000000000000000000007588 131.0
DYD3_k127_1592310_2 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000158 466.0
DYD3_k127_1592310_3 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 K01000 - 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 446.0
DYD3_k127_1592310_4 ABC-type branched-chain amino acid transport K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 428.0
DYD3_k127_1592310_5 Belongs to the D-alanine--D-alanine ligase family K01921 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008716,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009314,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0016020,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0040007,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 415.0
DYD3_k127_1592310_6 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002165 403.0
DYD3_k127_1592310_7 glutamate--cysteine ligase K01919 - 6.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006498 402.0
DYD3_k127_1592310_8 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 391.0
DYD3_k127_1592310_9 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000744 344.0
DYD3_k127_1620039_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 1.374e-288 902.0
DYD3_k127_1620039_1 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 590.0
DYD3_k127_1620039_10 Protein of unknown function (DUF1326) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004615 271.0
DYD3_k127_1620039_11 Cupin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001255 250.0
DYD3_k127_1620039_12 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553,K14160 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0090304,GO:1901360 - 0.00000000000000000000000000000000000000000000000000000000006306 211.0
DYD3_k127_1620039_13 Amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000001017 196.0
DYD3_k127_1620039_14 - - - - 0.000000000000000000000000000000000000000000000000001125 188.0
DYD3_k127_1620039_15 PFAM Rhomboid family protein - - - 0.00000000000000000000000000000000000000000005889 171.0
DYD3_k127_1620039_16 thiamine-containing compound biosynthetic process K02051 - - 0.0000000000000000000000000000002347 136.0
DYD3_k127_1620039_17 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.000000000000000000000000176 118.0
DYD3_k127_1620039_18 Class II Aldolase and Adducin N-terminal domain K01628 - 4.1.2.17 0.00000000000001412 83.0
DYD3_k127_1620039_19 uses NADH to detoxify nitric oxide (NO), protecting several 4Fe-4S NO-sensitive enzymes. Has at least 2 reductase partners, only one of which (NorW, flavorubredoxin reductase) has been identified. NO probably binds to the di-iron center - GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0043446,GO:0043448,GO:0044237,GO:0044248,GO:0071704,GO:1901575 - 0.0000000000006127 77.0
DYD3_k127_1620039_2 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 578.0
DYD3_k127_1620039_20 - - - - 0.0000000000008764 79.0
DYD3_k127_1620039_3 Peptidase dimerisation domain K13049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002615 484.0
DYD3_k127_1620039_4 Fumarylacetoacetate (FAA) hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009359 467.0
DYD3_k127_1620039_5 PFAM Cys Met metabolism pyridoxal-phosphate-dependent K01739 - 2.5.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005724 466.0
DYD3_k127_1620039_6 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 GO:0003674,GO:0003824,GO:0003849,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019438,GO:0019752,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002306 416.0
DYD3_k127_1620039_7 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346,K14161 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005553 373.0
DYD3_k127_1620039_8 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 346.0
DYD3_k127_1620039_9 Predicted metal-binding integral membrane protein (DUF2182) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 286.0
DYD3_k127_162923_0 PFAM AIR synthase related protein K01933 - 6.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005775 401.0
DYD3_k127_162923_1 ATPases associated with a variety of cellular activities K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007367 291.0
DYD3_k127_162923_2 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000006471 251.0
DYD3_k127_162923_3 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0000000000001574 80.0
DYD3_k127_162923_4 ABC transporter substrate-binding protein - - - 0.0000003604 57.0
DYD3_k127_1638962_0 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002948 552.0
DYD3_k127_1638962_1 Patatin-like phospholipase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004978 464.0
DYD3_k127_1638962_2 COGs COG1331 Highly conserved protein containing a thioredoxin domain K06888 - - 0.00000000000000000000000000000000000000000000000000000000000000000000375 253.0
DYD3_k127_1638962_3 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0000000000000001071 81.0
DYD3_k127_1638962_4 D-proline reductase K10793 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0046992,GO:0050002,GO:0050485,GO:0055114 1.21.4.1 0.000000002718 68.0
DYD3_k127_1641576_0 Catalyzes the conversion of feruloyl-CoA to vanillin and acetyl-CoA - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000664 353.0
DYD3_k127_1641576_1 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000003129 265.0
DYD3_k127_1641576_2 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.000000000000000000000000000000000000000000000000000000000000000004684 236.0
DYD3_k127_1641576_3 thiamine-containing compound biosynthetic process K02051 - - 0.000000000000000000000000000000000000000000002049 177.0
DYD3_k127_1650860_0 Sugar (and other) transporter K08178 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001697 392.0
DYD3_k127_1650860_1 Catalyzes the oxidative ring opening of 3- hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate K00452 - 1.13.11.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000007113 261.0
DYD3_k127_1650860_2 aldo keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005679 245.0
DYD3_k127_1652344_0 gluconolactonase activity K01053 - 3.1.1.17 1.706e-195 628.0
DYD3_k127_1652344_1 Sigma-54 interaction domain K15836 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008217 538.0
DYD3_k127_1652344_10 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.000000000000000000000000000000000000000000000000000000787 201.0
DYD3_k127_1652344_11 Cupin 2, conserved barrel domain protein K11477 - - 0.000000000000000000000000000000000000000000000001009 180.0
DYD3_k127_1652344_12 RNA polymerase sigma factor K03088 - - 0.00000000000000000000000000000000002147 144.0
DYD3_k127_1652344_13 AhpC/TSA family - - - 0.00000000000000000000000000000004419 127.0
DYD3_k127_1652344_14 EamA-like transporter family - - - 0.000000000000000001107 96.0
DYD3_k127_1652344_15 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000009285 64.0
DYD3_k127_1652344_16 Putative zinc-finger - - - 0.00000004624 58.0
DYD3_k127_1652344_17 Putative zinc-finger - - - 0.0000001858 57.0
DYD3_k127_1652344_2 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 447.0
DYD3_k127_1652344_3 Glucose dehydrogenase C-terminus - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002158 402.0
DYD3_k127_1652344_4 Belongs to the MIP aquaporin (TC 1.A.8) family K06188 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005448 307.0
DYD3_k127_1652344_5 A G-specific K03575 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003023 280.0
DYD3_k127_1652344_6 Cupin 2, conserved barrel domain protein K11477 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001134 258.0
DYD3_k127_1652344_7 NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000005683 237.0
DYD3_k127_1652344_8 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain K17247 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010181,GO:0016020,GO:0016021,GO:0016491,GO:0016679,GO:0019538,GO:0020037,GO:0030091,GO:0031224,GO:0031226,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0046906,GO:0048037,GO:0050662,GO:0055114,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901564 - 0.0000000000000000000000000000000000000000000000000000000000000000003843 234.0
DYD3_k127_1652344_9 Mannose-6-phosphate isomerase K00971,K16011 - 2.7.7.13,5.3.1.8 0.00000000000000000000000000000000000000000000000000000000000000009058 235.0
DYD3_k127_1665389_0 dehydrogenase e1 component K00164 - 1.2.4.2 3.452e-213 683.0
DYD3_k127_1665389_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.00000003136 59.0
DYD3_k127_167940_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 2.838e-274 863.0
DYD3_k127_167940_1 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 2.1.1.74 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002713 517.0
DYD3_k127_167940_10 ArgK protein K07588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003081 293.0
DYD3_k127_167940_11 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002431 278.0
DYD3_k127_167940_12 TIM-barrel fold metal-dependent hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003641 256.0
DYD3_k127_167940_13 Von Willebrand factor type A - - - 0.0000000000000000000000000000000000000000000000000000000000000000001573 242.0
DYD3_k127_167940_14 CoA-transferase family III K07749 GO:0003674,GO:0003824,GO:0008410,GO:0016740,GO:0016782,GO:0047369 2.8.3.16 0.0000000000000000000000000000000000000000000000000000000000000000001584 246.0
DYD3_k127_167940_15 Ppx/GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 0.0000000000000000000000000000000000000000000000000000000000000006876 230.0
DYD3_k127_167940_16 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.0000000000000000000000000000000000000000000000000000008894 207.0
DYD3_k127_167940_17 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.000000000000000000000000000000000000000000000000000002236 198.0
DYD3_k127_167940_18 oxidoreductase activity K07114,K16257 - - 0.000000000000000000000000000000000000000000000000003121 210.0
DYD3_k127_167940_19 Histone methylation protein DOT1 - - - 0.00000000000000000000000000000000000000000000000000443 193.0
DYD3_k127_167940_2 oxidoreductase activity K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004607 491.0
DYD3_k127_167940_20 Class ii aldolase K01628,K03077 - 4.1.2.17,5.1.3.4 0.0000000000000000000000000000000000000000000000002213 184.0
DYD3_k127_167940_21 Phosphoenolpyruvate phosphomutase K20454 - 4.1.3.32 0.00000000000000000000000000000000000000000000001876 183.0
DYD3_k127_167940_22 Dopa 4,5-dioxygenase family K10253 - - 0.00000000000000000000000000000000000000009625 153.0
DYD3_k127_167940_23 Class II Aldolase and Adducin N-terminal domain - - - 0.000000000000000000000000000000006556 136.0
DYD3_k127_167940_24 Thioesterase superfamily K10806 - - 0.00000000000000000000000000001183 125.0
DYD3_k127_167940_25 Putative prokaryotic signal transducing protein - - - 0.00000000000000000000000000006043 119.0
DYD3_k127_167940_26 von Willebrand factor, type A - - - 0.0000000000000000000000001527 123.0
DYD3_k127_167940_27 Belongs to the UPF0255 family K11750 GO:0003674,GO:0003824,GO:0005575,GO:0006109,GO:0006629,GO:0008150,GO:0008152,GO:0009894,GO:0016020,GO:0016298,GO:0016787,GO:0016788,GO:0019222,GO:0043470,GO:0044238,GO:0050789,GO:0065007,GO:0071704,GO:0080090 - 0.0000000000000000000000003607 112.0
DYD3_k127_167940_28 regulation of translation K03530,K05788 - - 0.000000000000000000000002086 105.0
DYD3_k127_167940_29 Glyoxalase-like domain K05606 - 5.1.99.1 0.00000000000000000000001899 102.0
DYD3_k127_167940_3 Belongs to the ABC transporter superfamily K02031,K02032,K15583 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006018 434.0
DYD3_k127_167940_30 Tetratricopeptide repeat - - - 0.0000000000000000000136 102.0
DYD3_k127_167940_31 glyoxalase bleomycin resistance protein dioxygenase K01759,K08234 - 4.4.1.5 0.000000000000000003109 89.0
DYD3_k127_167940_32 - - - - 0.00000000000000571 85.0
DYD3_k127_167940_33 nuclear chromosome segregation K09971 - - 0.0008181 52.0
DYD3_k127_167940_4 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006892 441.0
DYD3_k127_167940_5 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002933 428.0
DYD3_k127_167940_6 TIGRFAM oligopeptide dipeptide ABC transporter, ATPase subunit K02032,K10823 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 424.0
DYD3_k127_167940_7 ATPase associated with K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002587 389.0
DYD3_k127_167940_8 TIGRFAM DNA protecting protein DprA K04096 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003973 330.0
DYD3_k127_167940_9 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000932 322.0
DYD3_k127_1681684_0 CoA-binding domain protein - - - 0.0 1032.0
DYD3_k127_1681684_1 Belongs to the TPP enzyme family K01652 - 2.2.1.6 1.11e-221 695.0
DYD3_k127_1681684_2 acyl-CoA transferases carnitine dehydratase K07749 - 2.8.3.16 1.553e-198 625.0
DYD3_k127_1681684_3 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005275 406.0
DYD3_k127_1681684_4 lipid kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000002712 233.0
DYD3_k127_1681684_5 - - - - 0.0000000000000474 75.0
DYD3_k127_1681684_6 - - - - 0.00002557 46.0
DYD3_k127_1703006_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 1.726e-233 736.0
DYD3_k127_1703006_1 AMP-binding enzyme C-terminal domain K04110 - 6.2.1.25 2.573e-199 632.0
DYD3_k127_1703006_10 COG0765 ABC-type amino acid transport system, permease component K09971 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002063 424.0
DYD3_k127_1703006_11 Uncharacterized protein family (UPF0051) K09015 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006969 406.0
DYD3_k127_1703006_12 ABC transporter K09013 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008150,GO:0008152,GO:0009314,GO:0009628,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0031163,GO:0044085,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051186,GO:0071840 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009589 391.0
DYD3_k127_1703006_13 PFAM Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 376.0
DYD3_k127_1703006_14 TIGRFAM lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 376.0
DYD3_k127_1703006_15 Polysaccharide biosynthesis protein K01784,K08679 - 5.1.3.2,5.1.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001335 346.0
DYD3_k127_1703006_16 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 336.0
DYD3_k127_1703006_17 lactoylglutathione lyase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006885 327.0
DYD3_k127_1703006_18 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 331.0
DYD3_k127_1703006_19 ABC transporter K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002718 317.0
DYD3_k127_1703006_2 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006129 585.0
DYD3_k127_1703006_20 Oxidoreductase family, NAD-binding Rossmann fold K09949 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004333 322.0
DYD3_k127_1703006_21 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005511 323.0
DYD3_k127_1703006_22 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000554 297.0
DYD3_k127_1703006_23 Protein of unknown function (DUF1009) K09949 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002962 287.0
DYD3_k127_1703006_24 TIGRFAM amine acid ABC transporter, permease protein, 3-TM region, His Glu Gln Arg opine family K09970 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001329 293.0
DYD3_k127_1703006_25 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007575 270.0
DYD3_k127_1703006_26 ABC transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004563 278.0
DYD3_k127_1703006_27 PFAM glycosyl transferase family 9 K02843 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000839 252.0
DYD3_k127_1703006_28 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.00000000000000000000000000000000000000000000000000000000000000000003081 240.0
DYD3_k127_1703006_29 peptide deformylase activity K01462 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 3.5.1.88 0.000000000000000000000000000000000000000000000000000000000000000002803 231.0
DYD3_k127_1703006_3 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001546 576.0
DYD3_k127_1703006_30 PFAM Glycosyl transferase, group 1 K02844 - - 0.000000000000000000000000000000000000000000000000000000000000001457 233.0
DYD3_k127_1703006_31 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000003198 207.0
DYD3_k127_1703006_32 FeS assembly SUF system protein SufT - - - 0.0000000000000000000000000000000000000000000000000003298 192.0
DYD3_k127_1703006_33 NifU-like N terminal domain K04488 - - 0.0000000000000000000000000000000000000000000000003791 179.0
DYD3_k127_1703006_34 Glycosyltransferase family 9 (heptosyltransferase) K12982 - - 0.000000000000000000000000000000000000000000000001081 188.0
DYD3_k127_1703006_35 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000002889 177.0
DYD3_k127_1703006_36 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.0000000000000000000000000000000000000000000001384 177.0
DYD3_k127_1703006_37 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0005976,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008654,GO:0009029,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019637,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044464,GO:0046401,GO:0046467,GO:0046493,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.7.1.130 0.000000000000000000000000000000000000000000003865 180.0
DYD3_k127_1703006_38 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.0000000000000000000000000000000000000000002358 164.0
DYD3_k127_1703006_39 Pfam:DUF59 K02612 - - 0.0000000000000000000000000000000000000001347 152.0
DYD3_k127_1703006_4 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K06147,K11085 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000446 575.0
DYD3_k127_1703006_40 Bacterial extracellular solute-binding protein K02012 - - 0.000000000000000000000000000000000001069 152.0
DYD3_k127_1703006_41 Methyltransferase type 11 - - - 0.0000000000000000000000000000000004205 139.0
DYD3_k127_1703006_42 COG2346, Truncated hemoglobins K06886 - - 0.000000000000000000000000000014 122.0
DYD3_k127_1703006_43 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000004468 128.0
DYD3_k127_1703006_44 - - - - 0.000000000000000000000000005786 120.0
DYD3_k127_1703006_45 kinase activity - - - 0.000000000000000000000003476 113.0
DYD3_k127_1703006_46 Belongs to the UPF0434 family K09791 - - 0.00000000000000000000001474 100.0
DYD3_k127_1703006_47 cellular response to dsDNA K11211 - 2.7.1.166 0.00000000000000000000003122 109.0
DYD3_k127_1703006_48 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000004912 100.0
DYD3_k127_1703006_49 - - - - 0.000000000000000000001182 103.0
DYD3_k127_1703006_5 Elongator protein 3, MiaB family, Radical SAM K11779 - 2.5.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002032 544.0
DYD3_k127_1703006_50 Transcriptional regulator - - - 0.000000000000000003572 90.0
DYD3_k127_1703006_51 Outer membrane protein (OmpH-like) K06142 - - 0.000000000000005409 81.0
DYD3_k127_1703006_52 - - - - 0.000000000192 67.0
DYD3_k127_1703006_54 Lipopolysaccharide kinase (Kdo/WaaP) family - - - 0.000000008229 66.0
DYD3_k127_1703006_55 Subtilase family - - - 0.000009476 56.0
DYD3_k127_1703006_56 AMP-binding enzyme C-terminal domain K00666 - - 0.0004237 48.0
DYD3_k127_1703006_57 ABC transporter K01995 - - 0.0007178 45.0
DYD3_k127_1703006_6 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006905 521.0
DYD3_k127_1703006_7 general L-amino acid-binding periplasmic protein AapJ K09969 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 486.0
DYD3_k127_1703006_8 PFAM tRNA synthetase, class II (G, H, P and S) K01892 - 6.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005322 480.0
DYD3_k127_1703006_9 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K08352 - 1.8.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000275 459.0
DYD3_k127_1710539_0 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 GO:0003674,GO:0003824,GO:0004795,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008144,GO:0016829,GO:0016835,GO:0016838,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000002954 272.0
DYD3_k127_1726494_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006270,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0034645,GO:0042623,GO:0043138,GO:0043140,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008301 569.0
DYD3_k127_1726494_1 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 485.0
DYD3_k127_1726494_2 type IV pilus secretin PilQ K02666 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005133 271.0
DYD3_k127_1726494_3 TIGRFAM type IV pilus assembly protein PilM K02662 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002913 257.0
DYD3_k127_1726494_4 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000009446 171.0
DYD3_k127_1726494_5 Pilus assembly protein, PilO K02664 - - 0.000000000000000000000000000000008945 136.0
DYD3_k127_1726494_6 PFAM helix-turn-helix domain protein - - - 0.000000000000000003918 88.0
DYD3_k127_1726494_7 Fimbrial assembly protein (PilN) K02663 - - 0.000000000000000007164 89.0
DYD3_k127_1726494_8 Pilus assembly protein, PilP K02665 - - 0.000000000002519 76.0
DYD3_k127_1737462_0 DNA polymerase beta thumb K02347 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002141 582.0
DYD3_k127_1737462_1 - - - - 0.000000000000000000000000000000000000000003778 165.0
DYD3_k127_1737462_2 PFAM NHL repeat containing protein - - - 0.0005037 51.0
DYD3_k127_174312_0 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007245 460.0
DYD3_k127_174312_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002228 347.0
DYD3_k127_174312_2 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002907 293.0
DYD3_k127_1819585_0 Domain of unknown function (DUF1932) - - - 0.00000000000000000000000000000000000000000000000000000000000008023 224.0
DYD3_k127_1819585_1 YjgF/chorismate_mutase-like, putative endoribonuclease - - - 0.00000000000000000000000000000000000000001669 158.0
DYD3_k127_1819585_2 Ornithine cyclodeaminase/mu-crystallin family - - - 0.000000000000000000000000000000000005652 144.0
DYD3_k127_1819585_3 NMT1-like family K02051 - - 0.0000000695 64.0
DYD3_k127_1829376_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 3.046e-229 724.0
DYD3_k127_1829376_1 Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily K00121 - 1.1.1.1,1.1.1.284 5.326e-195 614.0
DYD3_k127_1829376_10 FAD metabolic process K00953,K15429 GO:0003674,GO:0003824,GO:0003919,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006725,GO:0006732,GO:0006747,GO:0006753,GO:0006766,GO:0006767,GO:0006771,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016779,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0042726,GO:0042727,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046443,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0070566,GO:0071704,GO:0071944,GO:0072387,GO:0072388,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.228,2.7.7.2 0.000000000000000000000000000000000000000000000000000000001325 209.0
DYD3_k127_1829376_11 [2Fe-2S] binding domain - - - 0.0000000000000000000000000000000000000000000000000000000271 201.0
DYD3_k127_1829376_12 Mo-molybdopterin cofactor metabolic process K03638 - 2.7.7.75 0.000000000000000000000000000000000000000000000000001848 186.0
DYD3_k127_1829376_13 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.0000000000000000000000000000000000000000000000008088 182.0
DYD3_k127_1829376_14 Major facilitator superfamily MFS_1 - - - 0.000000000000000000000000000000000000000000000002771 190.0
DYD3_k127_1829376_15 MoaE protein K21142 - 2.8.1.12 0.00000000000000000000000000000000000000000007729 163.0
DYD3_k127_1829376_16 Bacterial Ig-like domain (group 3) - - - 0.0000000000000000000000000000000000000000987 175.0
DYD3_k127_1829376_17 membrane-associated protein K03975 - - 0.00000000000000000000000000006603 124.0
DYD3_k127_1829376_18 Belongs to the ompA family - - - 0.000000000000000003485 94.0
DYD3_k127_1829376_19 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K21142 - 2.8.1.12 0.000000000000001483 83.0
DYD3_k127_1829376_2 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042,K11528 - 2.3.1.157,2.7.7.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000192 440.0
DYD3_k127_1829376_20 Carbon monoxide dehydrogenase subunit G (CoxG) - - - 0.000000000000002921 81.0
DYD3_k127_1829376_3 Subtilase family K01342 - 3.4.21.62 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 418.0
DYD3_k127_1829376_4 Domain of unknown function (DUF4921) K00965 - 2.7.7.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002035 347.0
DYD3_k127_1829376_5 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005797 282.0
DYD3_k127_1829376_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007261 284.0
DYD3_k127_1829376_7 Psort location Extracellular, score 9.64 - - - 0.000000000000000000000000000000000000000000000000000000000008788 237.0
DYD3_k127_1829376_8 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000001478 218.0
DYD3_k127_1829376_9 Enoyl-CoA hydratase/isomerase K07537 - 4.2.1.100 0.0000000000000000000000000000000000000000000000000000000008913 210.0
DYD3_k127_1843219_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 3.374e-205 663.0
DYD3_k127_1843219_1 transmembrane transport K02035,K15580 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006457,GO:0006810,GO:0006811,GO:0006820,GO:0006857,GO:0006869,GO:0006950,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010876,GO:0015711,GO:0015718,GO:0015721,GO:0015833,GO:0015849,GO:0015850,GO:0030288,GO:0030313,GO:0031975,GO:0033036,GO:0033218,GO:0042277,GO:0042597,GO:0042886,GO:0042939,GO:0044464,GO:0046942,GO:0050896,GO:0051179,GO:0051234,GO:0061077,GO:0071702,GO:0071705,GO:1900750 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006978 575.0
DYD3_k127_1843219_2 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002086 256.0
DYD3_k127_1843219_3 PFAM Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.00000000000000000000000000000000000000000000000000000000000001412 228.0
DYD3_k127_1843219_4 ABC-type nitrate sulfonate bicarbonate transport K02051 - - 0.00000000000000000000000000000000000000000002072 173.0
DYD3_k127_1843219_5 Amidohydrolase K07045 - - 0.00000000000000000000000000000000000007412 156.0
DYD3_k127_1849683_0 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002364 383.0
DYD3_k127_1849683_1 PBP superfamily domain K05772 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003736 354.0
DYD3_k127_1849683_2 Binding-protein-dependent transport system inner membrane component K05773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005232 294.0
DYD3_k127_1849683_3 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02010,K02045,K02049,K02068,K02071,K06857,K10112,K11072 - 3.6.3.25,3.6.3.30,3.6.3.31,3.6.3.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009685 279.0
DYD3_k127_1849683_4 Pfam:AmoA K07120 - - 0.00000000000000000000000000000000000000000000000000000000002619 219.0
DYD3_k127_1849683_5 Belongs to the ompA family - - - 0.00004824 51.0
DYD3_k127_1861906_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005772 537.0
DYD3_k127_1861906_1 von Willebrand factor (vWF) type A domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008802 461.0
DYD3_k127_1861906_2 peptidase S1 and S6, chymotrypsin Hap - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005905 350.0
DYD3_k127_1861906_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000001182 138.0
DYD3_k127_1861906_4 von Willebrand factor, type A K07114 - - 0.000000000000000000000000000000001313 132.0
DYD3_k127_1883856_0 Cobalamin-independent synthase, Catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000006956 232.0
DYD3_k127_1883856_1 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000002402 220.0
DYD3_k127_1883856_2 NMT1-like family - - - 0.000000000000000000000000000000000000000000000195 180.0
DYD3_k127_1883856_3 4,5-dihydroxyphthalate decarboxylase - - - 0.0000000000000000000000000000004281 126.0
DYD3_k127_1883856_4 NMT1-like family - - - 0.0000000000000000000000000501 121.0
DYD3_k127_191084_0 Flavin containing amine oxidoreductase - - - 1.258e-254 794.0
DYD3_k127_191084_1 Flavin containing amine oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006435 423.0
DYD3_k127_191084_2 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000004492 87.0
DYD3_k127_1928168_0 Arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 564.0
DYD3_k127_1928168_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005887 430.0
DYD3_k127_1928168_10 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00042 - 1.1.1.60 0.00000000000000000000000000000000000003981 156.0
DYD3_k127_1928168_11 Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase K07559 - - 0.000000000000000000000000000000000002394 143.0
DYD3_k127_1928168_12 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.0000000000000000000000000000000002928 132.0
DYD3_k127_1928168_13 MacB-like periplasmic core domain - - - 0.0000000000000006815 84.0
DYD3_k127_1928168_14 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.0000000000003062 70.0
DYD3_k127_1928168_15 Belongs to the TrpF family K01817 - 5.3.1.24 0.000000648 58.0
DYD3_k127_1928168_16 ChrR Cupin-like domain K07167 - - 0.0006633 47.0
DYD3_k127_1928168_17 Cell division protein K03591,K03749 - - 0.000666 50.0
DYD3_k127_1928168_2 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18,4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003513 380.0
DYD3_k127_1928168_3 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000951 325.0
DYD3_k127_1928168_4 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002088 301.0
DYD3_k127_1928168_5 Belongs to the TrpC family K01609,K13498 - 4.1.1.48,5.3.1.24 0.00000000000000000000000000000000000000000000000000000000000000000002442 240.0
DYD3_k127_1928168_6 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 GO:0003674,GO:0003824,GO:0004017,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000000000001665 234.0
DYD3_k127_1928168_7 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.0000000000000000000000000000000000000000000000000000007637 195.0
DYD3_k127_1928168_8 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000005672 173.0
DYD3_k127_1928168_9 PFAM ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000003707 156.0
DYD3_k127_1973822_0 Belongs to the IlvD Edd family K01687 GO:0003674,GO:0003824,GO:0004160,GO:0016829,GO:0016835,GO:0016836 4.2.1.9 7.164e-251 784.0
DYD3_k127_1973822_1 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 559.0
DYD3_k127_1973822_10 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3 0.0000000000000000000000000000000000000000000002316 176.0
DYD3_k127_1973822_11 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000159 122.0
DYD3_k127_1973822_2 response regulator K07712 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706 518.0
DYD3_k127_1973822_3 transport system fused permease components - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 487.0
DYD3_k127_1973822_4 Participates in both transcription termination and antitermination K02600 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001901 461.0
DYD3_k127_1973822_5 FMN-dependent dehydrogenase K00104 - 1.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005083 358.0
DYD3_k127_1973822_6 Nitrogen fixation master sensor histidine kinase, PAS domain-containing K02668,K07708,K07709 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005764 316.0
DYD3_k127_1973822_7 Phenazine biosynthesis protein PhzF - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006824 275.0
DYD3_k127_1973822_8 MaoC like domain - - - 0.00000000000000000000000000000000000000000000000000000002664 201.0
DYD3_k127_1973822_9 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.00000000000000000000000000000000000000000000000000003623 189.0
DYD3_k127_2010484_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 4.768e-226 726.0
DYD3_k127_2010484_1 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007542 620.0
DYD3_k127_2010484_10 Sugar fermentation stimulation protein K06206 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001484 259.0
DYD3_k127_2010484_11 Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000001477 249.0
DYD3_k127_2010484_12 Isochorismatase family K08281 - 3.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000005231 244.0
DYD3_k127_2010484_13 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000002646 235.0
DYD3_k127_2010484_14 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.000000000000000000000000000000000000000000000000000000000006245 213.0
DYD3_k127_2010484_15 Inositol monophosphatase family K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000008013 211.0
DYD3_k127_2010484_16 PFAM Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000000000000000000002476 203.0
DYD3_k127_2010484_17 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.0000000000000000000000000000000000000000000000000000007338 203.0
DYD3_k127_2010484_18 Transcriptional regulator, CarD family K07736 - - 0.00000000000000000000000000000000000000000000000000001782 192.0
DYD3_k127_2010484_19 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0050518,GO:0070567 2.7.7.60 0.0000000000000000000000000000000000000000000000000003574 193.0
DYD3_k127_2010484_2 Transglycosylase K05365 - 2.4.1.129,3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 527.0
DYD3_k127_2010484_20 Haloacid dehalogenase-like hydrolase K07025 - - 0.00000000000000000000000000000000000000000000000002377 187.0
DYD3_k127_2010484_21 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 GO:0000166,GO:0003674,GO:0003824,GO:0004312,GO:0004316,GO:0005488,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0030497,GO:0032787,GO:0036094,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0072330,GO:0097159,GO:1901265,GO:1901363,GO:1901576 1.1.1.100 0.0000000000000000000000000000000000000000000000001465 189.0
DYD3_k127_2010484_22 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.00000000000000000000000000000000000000000000134 172.0
DYD3_k127_2010484_23 Histidine triad (HIT) protein K02503 - - 0.0000000000000000000000000000000000000000007273 159.0
DYD3_k127_2010484_24 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.0000000000000000000000000000000000000001497 164.0
DYD3_k127_2010484_25 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000003764 159.0
DYD3_k127_2010484_26 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.00000000000000000000000000000167 128.0
DYD3_k127_2010484_27 Uncharacterised MFS-type transporter YbfB - - - 0.00000000000000000000000000173 126.0
DYD3_k127_2010484_28 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.00000000000000000000000006052 109.0
DYD3_k127_2010484_29 Rieske 2Fe-2S - - - 0.0000000000000000000000001553 110.0
DYD3_k127_2010484_3 Belongs to the Glu Leu Phe Val dehydrogenases family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002305 503.0
DYD3_k127_2010484_30 Domain of unknown function (DUF1844) - - - 0.000000000000000000000002936 108.0
DYD3_k127_2010484_31 Histidine kinase - - - 0.0000000000000000000001771 106.0
DYD3_k127_2010484_32 Rieske [2Fe-2S] domain - - - 0.00000000000000001124 89.0
DYD3_k127_2010484_33 peptidyl-tyrosine sulfation - - - 0.0003691 51.0
DYD3_k127_2010484_4 smart pdz dhr glgf K04771,K04772 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001851 473.0
DYD3_k127_2010484_5 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001587 406.0
DYD3_k127_2010484_6 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002247 357.0
DYD3_k127_2010484_7 Dihydrodipicolinate synthetase family K14585 - 4.1.2.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006587 341.0
DYD3_k127_2010484_8 PFAM asparagine synthase K06864 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007218 298.0
DYD3_k127_2010484_9 major facilitator superfamily MFS_1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001077 284.0
DYD3_k127_201069_0 Glucose dehydrogenase C-terminus - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004826 322.0
DYD3_k127_201069_1 Domain of unknown function (DUF427) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002781 301.0
DYD3_k127_201069_2 Bacterial protein of unknown function (DUF924) - - - 0.000000000000000000000000000000000000000000000000000000000000001399 223.0
DYD3_k127_201069_3 Sir2 family K12410 - - 0.0000000000000000000000000002589 117.0
DYD3_k127_2044038_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 2.388e-262 833.0
DYD3_k127_2044038_1 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism K00990 - 2.7.7.59 3.63e-222 719.0
DYD3_k127_2044038_10 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000000000000000000004596 211.0
DYD3_k127_2044038_11 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.00000000000000000000000000000000000000000000000000004341 194.0
DYD3_k127_2044038_12 Flavin reductase like domain - - - 0.0000000000000000000000000000000000000000244 158.0
DYD3_k127_2044038_13 - - - - 0.00000000000000000000000000001933 124.0
DYD3_k127_2044038_14 cellulose binding - - - 0.0000000000000000000000000002777 126.0
DYD3_k127_2044038_15 bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding - - - 0.000000000000000000444 93.0
DYD3_k127_2044038_16 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR - - - 0.0000000000001018 74.0
DYD3_k127_2044038_17 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000009657 66.0
DYD3_k127_2044038_18 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.0007487 45.0
DYD3_k127_2044038_2 DEAD DEAH box helicase K03654 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002121 612.0
DYD3_k127_2044038_3 PFAM UBA THIF-type NAD FAD binding protein K21029,K21147 - 2.7.7.80,2.8.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 494.0
DYD3_k127_2044038_4 TIGRFAM Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003585 446.0
DYD3_k127_2044038_5 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002501 304.0
DYD3_k127_2044038_6 integrase domain protein SAM domain protein K03733,K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000386 289.0
DYD3_k127_2044038_7 Belongs to the pseudouridine synthase RsuA family K06178,K06183 - 5.4.99.19,5.4.99.22 0.00000000000000000000000000000000000000000000000000000000000000000001878 241.0
DYD3_k127_2044038_8 Peptidase M50 - - - 0.0000000000000000000000000000000000000000000000000000000000000000008335 234.0
DYD3_k127_2044038_9 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.00000000000000000000000000000000000000000000000000000000000001162 224.0
DYD3_k127_2059793_0 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 GO:0003674,GO:0003824,GO:0006091,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009055,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0018130,GO:0019438,GO:0022900,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0052693,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.17.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 478.0
DYD3_k127_2059793_1 Thioesterase-like superfamily K07107 - - 0.00000000000000000000000000000000004367 138.0
DYD3_k127_2059793_2 Uncharacterized conserved protein (DUF2203) - - - 0.00000000000000001425 84.0
DYD3_k127_2059793_3 Trypsin-like peptidase domain - - - 0.000000000003247 70.0
DYD3_k127_206988_0 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003093 279.0
DYD3_k127_206988_1 NMT1-like family - - - 0.000000000000000000000000000000000008363 149.0
DYD3_k127_2091641_0 succinate dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003802 481.0
DYD3_k127_2091641_1 ornithine cyclodeaminase K01750 - 4.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 457.0
DYD3_k127_2091641_10 Haem-degrading K11477 - - 0.00000000000002429 79.0
DYD3_k127_2091641_11 ABC-type nitrate sulfonate bicarbonate transport K02051 - - 0.0000000000001169 81.0
DYD3_k127_2091641_12 NMT1-like family - - - 0.0000006942 58.0
DYD3_k127_2091641_2 Acetyltransferase (GNAT) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003705 383.0
DYD3_k127_2091641_3 Coenzyme A transferase K01039 - 2.8.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004893 343.0
DYD3_k127_2091641_4 acetyl-coa acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008802 336.0
DYD3_k127_2091641_5 peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000001275 246.0
DYD3_k127_2091641_6 PFAM Coenzyme A transferase K01040 - 2.8.3.12 0.000000000000000000000000000000000000000000000000000000000000000000002621 240.0
DYD3_k127_2091641_7 cytochrome c oxidase cbb3-type, subunit II K00405 - - 0.0000000000000000000000000000000000000000000000000003272 195.0
DYD3_k127_2091641_8 Rubredoxin-like zinc ribbon domain (DUF35_N) K07068 - - 0.000000000000000000000000000000000009418 140.0
DYD3_k127_2091641_9 - - - - 0.000000000000005775 81.0
DYD3_k127_2100035_0 Pfam Amidohydrolase K07045 - - 0.0000000000000000000000000000000000000000000000000000002459 207.0
DYD3_k127_2100035_1 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components - - - 0.000000000000000000000000000000000000000000000000000001279 205.0
DYD3_k127_2100035_2 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000006281 198.0
DYD3_k127_2100035_3 ABC-type nitrate sulfonate bicarbonate transport K02051 - - 0.0000000000001814 82.0
DYD3_k127_2110199_0 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005521 278.0
DYD3_k127_2110199_1 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000004507 221.0
DYD3_k127_2115254_0 Alpha-amylase domain K01182,K01187,K01226 - 3.2.1.10,3.2.1.20,3.2.1.93 2.823e-239 752.0
DYD3_k127_2115254_1 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004215 402.0
DYD3_k127_2115254_2 dehydrogenase e1 component K00164 - 1.2.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009502 336.0
DYD3_k127_2115254_3 Alpha-amylase domain K05343 - 3.2.1.1,5.4.99.16 0.00000000000000000000000000000000000000000000000000000000000000000003504 232.0
DYD3_k127_2122224_0 Tripartite tricarboxylate transporter TctA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003273 526.0
DYD3_k127_2122224_1 MmgE/PrpD family K01720 - 4.2.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007862 359.0
DYD3_k127_2122224_2 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001851 336.0
DYD3_k127_2122224_3 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.0008195 42.0
DYD3_k127_2123075_0 3-octaprenyl-4-hydroxybenzoate carboxy-lyase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003253 362.0
DYD3_k127_2123075_1 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.000000000000000000000000000000000000000000002874 175.0
DYD3_k127_2123075_2 Amp-dependent synthetase and ligase K08295 - 6.2.1.32 0.0000000000000000000004673 107.0
DYD3_k127_2136789_0 TIGRFAM molybdenum cofactor synthesis K03750,K07219 - 2.10.1.1 6.708e-201 644.0
DYD3_k127_2136789_1 TIGRFAM molybdenum cofactor synthesis domain K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009906 368.0
DYD3_k127_2136789_2 aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 364.0
DYD3_k127_2136789_3 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components - - - 0.00000000000000000000000000000000000002559 156.0
DYD3_k127_2136789_4 NMT1-like family - - - 0.00000000000000000000000000000000000004287 155.0
DYD3_k127_2136789_5 4Fe-4S dicluster domain K00124 - - 0.0000000000000000000000000000000000008204 147.0
DYD3_k127_2136789_6 Catalyzes the conversion of maleate to fumarate K01799,K06033 - 4.1.1.76,5.2.1.1 0.00000001863 64.0
DYD3_k127_2136789_7 Helix-turn-helix domain - - - 0.0003504 44.0
DYD3_k127_2152396_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005479 603.0
DYD3_k127_2152396_1 serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000004002 164.0
DYD3_k127_2152396_2 Transcriptional regulator - - - 0.00000000000000000000000001508 113.0
DYD3_k127_2152396_3 - - - - 0.0000000000000000000003952 98.0
DYD3_k127_2152396_4 - - - - 0.000000000000000000003443 95.0
DYD3_k127_2153403_0 PFAM TrkA-N domain K03499 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006785 318.0
DYD3_k127_2153403_1 Psort location CytoplasmicMembrane, score 10.00 K03498 - - 0.000001431 57.0
DYD3_k127_2176215_0 Belongs to the bacterial solute-binding protein 9 family K02077,K09815,K09818 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007477 374.0
DYD3_k127_2176215_1 ABC-3 protein K09816,K09819 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009011 278.0
DYD3_k127_2176215_2 PFAM ABC transporter related K09817 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007563 249.0
DYD3_k127_2176215_3 Histone methylation protein DOT1 - - - 0.00000000000000000000000000000000000000000000000000000002194 203.0
DYD3_k127_2176215_4 PFAM Methyltransferase K15256 - - 0.00000000000000001766 90.0
DYD3_k127_2176215_5 Periplasmic protein TonB links inner and outer membranes - - - 0.00000000005403 73.0
DYD3_k127_2176215_6 PFAM TonB-dependent Receptor Plug - - - 0.00000000007072 65.0
DYD3_k127_2176215_7 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000007546 63.0
DYD3_k127_2176215_8 - - - - 0.0000005163 61.0
DYD3_k127_2176215_9 SCO1/SenC K07152 - - 0.00007821 51.0
DYD3_k127_2218550_0 PFAM carboxyl transferase K01966 - 2.1.3.15,6.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002877 563.0
DYD3_k127_2218550_1 Na+-transporting oxaloacetate decarboxylase beta subunit K01572 - 4.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001921 522.0
DYD3_k127_2218550_2 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 390.0
DYD3_k127_2218550_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009987 372.0
DYD3_k127_2218550_4 Memo-like protein K06990 - - 0.0000000000000000000000000000000000000000000000000000001886 205.0
DYD3_k127_2218550_5 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.0000000000000000000000000000000000000000000000007829 181.0
DYD3_k127_2218550_6 Pfam:DUF59 K02612 - - 0.00000000000000000000000000000000000003752 144.0
DYD3_k127_2218550_7 Belongs to the ompA family K03286 - - 0.000000000000000000000004271 111.0
DYD3_k127_2218550_8 Glycine cleavage H-protein - - - 0.0000000000000000005606 88.0
DYD3_k127_2241120_0 acetyl-coa acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000198 343.0
DYD3_k127_2241120_1 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000001264 252.0
DYD3_k127_2241120_2 FKBP-type peptidyl-prolyl cis-trans isomerase K01802 - 5.2.1.8 0.00000000000000000000000000000000002056 143.0
DYD3_k127_2241120_3 Rubredoxin-like zinc ribbon domain (DUF35_N) K07068 - - 0.0000000000000000000000000000000001227 137.0
DYD3_k127_2241120_4 ABC transporter substrate binding protein - - - 0.000000000000000000000000000001764 126.0
DYD3_k127_2241120_5 ABC transporter substrate binding protein K01989 - - 0.000000000594 66.0
DYD3_k127_2241120_6 EamA-like transporter family K08978 - - 0.0001166 53.0
DYD3_k127_2241120_7 ABC transporter substrate binding protein K01989 - - 0.000307 45.0
DYD3_k127_2246477_0 proline dipeptidase activity - - - 4.136e-236 735.0
DYD3_k127_2246477_1 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor K21417 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003133 544.0
DYD3_k127_2246477_2 Catalytic domain of components of various dehydrogenase complexes K00627 - 2.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000001893 265.0
DYD3_k127_2247735_0 TIGRFAM ATPase, P-type, K Mg Cd Cu Zn Na Ca Na H-transporter K01537 - 3.6.3.8 0.0 1233.0
DYD3_k127_2247735_1 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 7.501e-198 626.0
DYD3_k127_2247735_2 transcription factor binding K15836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000907 445.0
DYD3_k127_2247735_3 Diguanylate cyclase K21084 - 2.7.7.65 0.00000000000000000000000000000000000000004713 162.0
DYD3_k127_2247735_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000001142 146.0
DYD3_k127_2247735_5 helix_turn_helix, Lux Regulon - - - 0.0000000000000000005213 87.0
DYD3_k127_2247735_6 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.000000000000000003878 89.0
DYD3_k127_2247735_7 PFAM sigma-54 factor interaction domain-containing protein - - - 0.000003682 48.0
DYD3_k127_2251606_0 PFAM aminotransferase class V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005511 435.0
DYD3_k127_2251606_1 Oxidoreductase molybdopterin binding K07147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008145 366.0
DYD3_k127_2251606_2 Metallo-beta-lactamase superfamily K06897 - 2.5.1.105 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008907 323.0
DYD3_k127_2251606_3 Fumarylacetoacetate (FAA) hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000005179 203.0
DYD3_k127_2251606_4 alpha beta - - - 0.000000000000000000000000000000000000000002027 166.0
DYD3_k127_2251606_5 aldo keto reductase - - - 0.000000000000000000000000000000000000000002909 160.0
DYD3_k127_2251606_6 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000004779 165.0
DYD3_k127_2251606_7 Forkhead associated domain - - - 0.0007624 51.0
DYD3_k127_2262848_0 Dienelactone hydrolase family K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003068 296.0
DYD3_k127_2262848_1 PFAM YeeE YedE family (DUF395) K07112 - - 0.000000000000000000000000000000000000000009004 164.0
DYD3_k127_2262848_2 Transporter component K07112 - - 0.00000000000000000000000000000000000000006105 155.0
DYD3_k127_2262848_3 tetratricopeptide repeat - - - 0.000000000000000000000000000000005515 134.0
DYD3_k127_2262848_4 Hsp90 protein K04079 - - 0.0003659 52.0
DYD3_k127_2263365_0 Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 - 3.4.21.26 3.66e-199 644.0
DYD3_k127_2263365_1 Carboxymuconolactone decarboxylase family - - - 0.0001078 46.0
DYD3_k127_2280057_0 associated with various cellular activities K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005697 337.0
DYD3_k127_2280057_1 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000000000000000000000000000000000007003 242.0
DYD3_k127_2280057_2 RDD family K06384 - - 0.00000000000000000000000000000006095 138.0
DYD3_k127_2280057_3 RDD family K06384 - - 0.0000000000000000000000000000001322 135.0
DYD3_k127_2280057_4 pathogenesis K02417,K02519 - - 0.000000000000000006845 93.0
DYD3_k127_2280057_5 - - - - 0.0000000003133 72.0
DYD3_k127_2280057_6 Domain of unknown function (DUF4129) - - - 0.000543 50.0
DYD3_k127_2323234_0 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005292 320.0
DYD3_k127_2323234_1 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000002628 214.0
DYD3_k127_2323234_2 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000001072 196.0
DYD3_k127_2327142_0 Leucyl-tRNA synthetase, Domain 2 K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.0 1134.0
DYD3_k127_2327142_1 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 1.797e-304 947.0
DYD3_k127_2327142_10 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.0000000000000000000000000000000000000000000000000000001459 202.0
DYD3_k127_2327142_11 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.0000000000000000000000000000000000000000000000000000001892 198.0
DYD3_k127_2327142_12 riboflavin synthase, alpha K00793 - 2.5.1.9 0.000000000000000000000000000000000000000000000000000007476 195.0
DYD3_k127_2327142_13 TIGRFAM sugar-phosphate isomerase, RpiB LacA LacB family K01808 - 5.3.1.6 0.000000000000000000000000000000000000000000000004029 178.0
DYD3_k127_2327142_14 Trypsin-like peptidase domain - - - 0.0000000000000000000000000000000000000000000003287 178.0
DYD3_k127_2327142_15 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.000000000000000000000000000000002711 134.0
DYD3_k127_2327142_16 Uncharacterized ACR, COG1399 K07040 - - 0.000000000000000000000000002972 118.0
DYD3_k127_2327142_17 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.0000000000000000000000003196 106.0
DYD3_k127_2327142_18 Belongs to the 'phage' integrase family - - - 0.00000000000000005235 86.0
DYD3_k127_2327142_19 Ribosomal L32p protein family K02911 - - 0.0000000000000002256 81.0
DYD3_k127_2327142_2 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 3.08e-200 633.0
DYD3_k127_2327142_20 Lipopolysaccharide-assembly - - - 0.00000000004007 71.0
DYD3_k127_2327142_22 Binds directly to 16S ribosomal RNA K02968 - - 0.00000009913 58.0
DYD3_k127_2327142_3 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005924 461.0
DYD3_k127_2327142_4 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004484 360.0
DYD3_k127_2327142_5 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001773 355.0
DYD3_k127_2327142_6 TIGRFAM malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004268 346.0
DYD3_k127_2327142_7 SMART Elongator protein 3 MiaB NifB K07139 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 303.0
DYD3_k127_2327142_8 reductase K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003712 276.0
DYD3_k127_2327142_9 ATP cone domain K07738 - - 0.0000000000000000000000000000000000000000000000000000000001277 211.0
DYD3_k127_2359252_0 Penicillin amidase K01434 - 3.5.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003331 496.0
DYD3_k127_2359252_1 Decarboxylase involved in the decarboxylation and detoxification of phenolic derivatives under both aerobic and anaerobic conditions. It is able to catalyze the reversible decarboxylation of 4-hydroxybenzoate K01612 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0016829,GO:0016830,GO:0016831,GO:0044424,GO:0044464 4.1.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 323.0
DYD3_k127_2359252_10 oxidation-reduction process - - - 0.00000000000000000000000001171 113.0
DYD3_k127_2359252_11 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.00000000000000001931 83.0
DYD3_k127_2359252_12 carbon monoxide dehydrogenase K09386 - - 0.00000000000001908 79.0
DYD3_k127_2359252_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 317.0
DYD3_k127_2359252_3 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000008845 208.0
DYD3_k127_2359252_4 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000002311 204.0
DYD3_k127_2359252_5 response regulator K02479 - - 0.00000000000000000000000000000000000000000000008588 177.0
DYD3_k127_2359252_6 PFAM Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000001389 157.0
DYD3_k127_2359252_7 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain - - - 0.0000000000000000000000000000005069 129.0
DYD3_k127_2359252_8 sulfopyruvate decarboxylase, alpha subunit K06034 - 4.1.1.79 0.00000000000000000000000000004254 123.0
DYD3_k127_2359252_9 PFAM Glutathione S-transferase, N-terminal K00799 - 2.5.1.18 0.0000000000000000000000000001921 123.0
DYD3_k127_2384232_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 6.969e-305 947.0
DYD3_k127_2384232_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005604 578.0
DYD3_k127_2384232_2 thiamine-containing compound biosynthetic process K02051 - - 0.00000000000004407 84.0
DYD3_k127_2384232_3 Amidohydrolase - - - 0.0001032 45.0
DYD3_k127_2393636_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 3.222e-244 768.0
DYD3_k127_2393636_1 PFAM formate nitrite transporter K06212,K21993 - - 0.00000000000000000000000000000000000000000001815 164.0
DYD3_k127_2393636_2 ribosomal large subunit export from nucleus - - - 0.00000000000000000000000002545 113.0
DYD3_k127_2407191_0 PFAM Fructose-bisphosphate aldolase, class-I K01623 - 4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006521 437.0
DYD3_k127_2407191_1 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007542 368.0
DYD3_k127_2407191_10 4,5-dihydroxyphthalate decarboxylase K04102 - 4.1.1.55 0.00000000000000000000000000000000000000000000000000000000001284 218.0
DYD3_k127_2407191_11 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000000000000000000000000000000006385 196.0
DYD3_k127_2407191_12 GTP binding K09767 GO:0000049,GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005524,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0008144,GO:0008150,GO:0009987,GO:0017076,GO:0019001,GO:0030554,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0033554,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000000008251 190.0
DYD3_k127_2407191_13 Thioesterase superfamily - - - 0.0000000000000000000000000000000000000000007 161.0
DYD3_k127_2407191_14 PFAM FIST C domain - - - 0.000000000000000000000000000000000004187 152.0
DYD3_k127_2407191_15 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.00000000000000000000000006704 110.0
DYD3_k127_2407191_16 DoxX K03885,K16937 - 1.6.99.3,1.8.5.2 0.00000000000000000004988 96.0
DYD3_k127_2407191_17 acetoin utilization protein K04767 - - 0.0000000000000000001515 94.0
DYD3_k127_2407191_18 NMT1-like family K02051 - - 0.000000000004815 77.0
DYD3_k127_2407191_19 nitrite reductase [NAD(P)H] activity K00363 - 1.7.1.15 0.0000001061 58.0
DYD3_k127_2407191_2 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004645 336.0
DYD3_k127_2407191_20 Iron-containing redox enzyme K06137 - 1.3.3.11 0.0000004802 60.0
DYD3_k127_2407191_3 aldo keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006 314.0
DYD3_k127_2407191_4 von Willebrand factor (vWF) type A domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 327.0
DYD3_k127_2407191_5 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000001512 267.0
DYD3_k127_2407191_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001242 267.0
DYD3_k127_2407191_7 COG0665 Glycine D-amino acid oxidases (deaminating) K19746 - 1.4.99.6 0.00000000000000000000000000000000000000000000000000000000000000000005088 249.0
DYD3_k127_2407191_8 TraB family K09973 - - 0.00000000000000000000000000000000000000000000000000000000000001029 228.0
DYD3_k127_2407191_9 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000001535 217.0
DYD3_k127_2429790_0 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001974 398.0
DYD3_k127_2429790_1 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000004177 236.0
DYD3_k127_2429790_2 PFAM GCN5-related N-acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000003857 203.0
DYD3_k127_2441047_0 Belongs to the UbiD family K03182 - 4.1.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003324 477.0
DYD3_k127_2441047_1 Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB) K19802 - 5.1.1.20 0.0000000000000000000000000000000000000000000004911 180.0
DYD3_k127_2441047_2 F420H(2)-dependent quinone reductase - - - 0.0000000000000000008594 89.0
DYD3_k127_2441047_3 - - - - 0.0000000000000008652 85.0
DYD3_k127_2441047_4 Domain of Unknown Function (DUF748) - - - 0.00000001305 59.0
DYD3_k127_2453291_0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00122,K00335 - 1.17.1.9,1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001376 486.0
DYD3_k127_2453291_1 Amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000176 387.0
DYD3_k127_2453291_2 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000001386 226.0
DYD3_k127_2453291_3 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000003873 154.0
DYD3_k127_2456339_0 PFAM Alcohol dehydrogenase GroES-like - - - 2.814e-194 611.0
DYD3_k127_2456339_1 Binding-protein-dependent transport system inner membrane component K02011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003684 439.0
DYD3_k127_2456339_2 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002065 279.0
DYD3_k127_2456339_3 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000008981 164.0
DYD3_k127_2456339_4 Bacterial extracellular solute-binding protein K02012 - - 0.0000000000000000000000000000003156 136.0
DYD3_k127_2467709_0 Belongs to the TPP enzyme family K01576 - 4.1.1.7 0.00000000000000000000000000000002154 128.0
DYD3_k127_2467709_1 NMT1-like family K02051 - - 0.0000000000000000000001906 109.0
DYD3_k127_2474786_0 Bacterial DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.0 1201.0
DYD3_k127_2474786_1 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 2.466e-219 690.0
DYD3_k127_2474786_2 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 GO:0003674,GO:0003824,GO:0003938,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006183,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046039,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0050896,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.1.1.205 4.964e-211 665.0
DYD3_k127_2474786_3 Possible lysine decarboxylase K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 312.0
DYD3_k127_2474786_4 Nudix hydrolase - - - 0.000000000000000000145 94.0
DYD3_k127_2474786_5 Putative regulatory protein - - - 0.000000001279 62.0
DYD3_k127_250473_0 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00042 - 1.1.1.60 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003859 318.0
DYD3_k127_250473_1 PFAM Poly-beta-hydroxybutyrate polymerase domain protein K03821 - - 0.000000000000000000000000000000000000000000000000000000000000001248 222.0
DYD3_k127_250473_2 cytochrome C peroxidase - - - 0.000000000000000000000000000000000000000000001831 168.0
DYD3_k127_2516427_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003114 546.0
DYD3_k127_2516427_1 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000004058 271.0
DYD3_k127_2516427_2 carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity K01956 GO:0000050,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005951,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0019627,GO:0019752,GO:0032991,GO:0034641,GO:0040007,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000002994 232.0
DYD3_k127_2516427_3 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000000000000000000000000000000000001539 184.0
DYD3_k127_2516427_4 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant K02825 GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 2.4.2.9 0.000000000000000000000000000000000000000004003 161.0
DYD3_k127_2516427_5 Catalyzes the oxidative ring opening of 3- hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate K00452 - 1.13.11.6 0.0000000000000000000000000000000000000000127 159.0
DYD3_k127_2533200_0 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00383 GO:0000166,GO:0003674,GO:0003824,GO:0004362,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015036,GO:0015037,GO:0015038,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0048037,GO:0050660,GO:0050662,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0071949,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901265,GO:1901363,GO:1990748 1.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001691 563.0
DYD3_k127_2533200_1 ParB-like nuclease domain K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 317.0
DYD3_k127_2533200_10 Catalyzes the conversion of maleate to fumarate K01799 - 5.2.1.1 0.00000000000002954 82.0
DYD3_k127_2533200_11 thiamine-containing compound biosynthetic process K04102 - 4.1.1.55 0.00000000005126 66.0
DYD3_k127_2533200_12 Iron-containing redox enzyme - - - 0.00000006915 55.0
DYD3_k127_2533200_13 bleomycin resistance protein - - - 0.0001413 51.0
DYD3_k127_2533200_2 Rieske [2Fe-2S] domain K19982 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005746 269.0
DYD3_k127_2533200_3 Amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003483 262.0
DYD3_k127_2533200_4 Amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004362 255.0
DYD3_k127_2533200_5 major facilitator superfamily MFS_1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000001898 245.0
DYD3_k127_2533200_6 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components - - - 0.000000000000000000000000000000000000000000003863 171.0
DYD3_k127_2533200_7 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020,K19647 - 1.1.1.291,1.1.1.31 0.00000000000000000000000000000000000000000005631 171.0
DYD3_k127_2533200_8 NMT1-like family K02051 - - 0.000000000000000001909 97.0
DYD3_k127_2533200_9 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000001908 79.0
DYD3_k127_2558683_0 all-trans-retinol 13,14-reductase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002222 411.0
DYD3_k127_2558683_1 associated with various cellular activities K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008011 352.0
DYD3_k127_2558683_2 KR domain K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000376 273.0
DYD3_k127_2558683_3 FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000007579 251.0
DYD3_k127_2558683_4 von Willebrand factor (vWF) type A domain - - - 0.000000000000000000000000000000000000000000002641 180.0
DYD3_k127_2558683_5 Bacterial extracellular solute-binding protein K02012 - - 0.0000000000000000000000000000000000000000004382 173.0
DYD3_k127_2609896_0 lactoylglutathione lyase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001831 424.0
DYD3_k127_2609896_1 Acetyl xylan esterase (AXE1) K06889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 352.0
DYD3_k127_2609896_2 Belongs to the LDH2 MDH2 oxidoreductase family K00073,K13574 - 1.1.1.350 0.00000000000000000000000000000000000000000000000000006448 200.0
DYD3_k127_2609896_3 deacetylase K22278 - 3.5.1.104 0.00000000000000000000000000000001455 138.0
DYD3_k127_2616188_0 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 1.609e-227 722.0
DYD3_k127_2616188_1 LVIVD repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000132 381.0
DYD3_k127_2616188_10 Protein of unknown function (DUF3108) - - - 0.00000000000000002911 92.0
DYD3_k127_2616188_11 peptidyl-tyrosine sulfation - - - 0.00000000000004092 80.0
DYD3_k127_2616188_12 PFAM Peptidase M48 - - - 0.0000000000001586 79.0
DYD3_k127_2616188_13 Amidohydrolase K07045 - - 0.00009971 50.0
DYD3_k127_2616188_2 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 363.0
DYD3_k127_2616188_3 Hydrolase - - - 0.00000000000000000000000000000000000000000000000000000001697 207.0
DYD3_k127_2616188_4 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.0000000000000000000000000000000000000000000000001563 187.0
DYD3_k127_2616188_5 Belongs to the GST superfamily K00799,K11209 - 2.5.1.18 0.0000000000000000000000000000000000000000000000773 173.0
DYD3_k127_2616188_6 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533 - - 0.0000000000000000000000000000000000000000045 165.0
DYD3_k127_2616188_7 - - - - 0.00000000000000000000000000000000000002892 158.0
DYD3_k127_2616188_8 Methyltransferase domain - - - 0.000000000000000000000000000000000001012 149.0
DYD3_k127_2616188_9 response regulator - - - 0.0000000000000000001387 93.0
DYD3_k127_2617337_0 Belongs to the peptidase S16 family - - - 3.733e-194 636.0
DYD3_k127_2617337_1 Two component, sigma54 specific, transcriptional regulator, Fis family K02667,K07714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003841 455.0
DYD3_k127_2617337_10 PFAM Cold-shock protein, DNA-binding - - - 0.000000000000000000000000000000000022 140.0
DYD3_k127_2617337_11 Universal stress protein - - - 0.000000000000000000000000000000001557 141.0
DYD3_k127_2617337_12 Domain in cystathionine beta-synthase and other proteins. K04767 - - 0.000000000000000000000000000000002006 137.0
DYD3_k127_2617337_13 Universal stress protein family - - - 0.00000000000000000000000000000007809 136.0
DYD3_k127_2617337_14 Putative nucleotidyltransferase substrate binding domain - - - 0.0000000000000000000000001015 111.0
DYD3_k127_2617337_15 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000000000000000000004554 109.0
DYD3_k127_2617337_16 DNA primase activity - - - 0.000000000000000000000682 109.0
DYD3_k127_2617337_17 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000176 99.0
DYD3_k127_2617337_18 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.0000000000000000001741 94.0
DYD3_k127_2617337_19 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.000000000000000009357 86.0
DYD3_k127_2617337_2 PFAM Uncharacterised ACR, YagE family COG1723 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002183 356.0
DYD3_k127_2617337_20 Rubrerythrin - - - 0.000000001763 64.0
DYD3_k127_2617337_21 PFAM zinc finger, DksA TraR C4-type K06204 - - 0.000000002536 63.0
DYD3_k127_2617337_22 Universal stress protein family - - - 0.00000033 57.0
DYD3_k127_2617337_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001507 314.0
DYD3_k127_2617337_4 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005336 297.0
DYD3_k127_2617337_5 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001634 269.0
DYD3_k127_2617337_6 Phosphoribosyl transferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000006744 231.0
DYD3_k127_2617337_7 AMP binding - - - 0.000000000000000000000000000000000000000000334 164.0
DYD3_k127_2617337_8 Cys-tRNA(Pro) hydrolase activity K03976,K19055 - - 0.00000000000000000000000000000000000001324 150.0
DYD3_k127_2617337_9 RNA recognition motif - - - 0.000000000000000000000000000000000004379 139.0
DYD3_k127_2651048_0 AAA domain K06217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001629 433.0
DYD3_k127_2651048_1 Trypsin K08070 - 1.3.1.74 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002692 426.0
DYD3_k127_2651048_2 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 GO:0006457,GO:0008150,GO:0009987 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001075 291.0
DYD3_k127_2651048_3 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000007061 159.0
DYD3_k127_2651048_4 Belongs to the small heat shock protein (HSP20) family - - - 0.0000000000000000000000000000000007946 136.0
DYD3_k127_2651048_5 Uncharacterised protein family UPF0047 - - - 0.000000000000000000000000000000007505 128.0
DYD3_k127_2651048_6 PFAM regulatory protein, MerR K13640 - - 0.00000001923 62.0
DYD3_k127_2664643_0 Ornithine cyclodeaminase/mu-crystallin family K01750,K19244 - 1.4.1.1,4.3.1.12 0.000000000000000000000000000000000000227 154.0
DYD3_k127_2664643_1 Creatinase/Prolidase N-terminal domain - - - 0.0000000000000000000000000000001076 132.0
DYD3_k127_2668783_0 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002454 459.0
DYD3_k127_2668783_1 Major Facilitator Superfamily K02575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001764 359.0
DYD3_k127_2668783_2 Histidine kinase-like ATPases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006012 307.0
DYD3_k127_2668783_3 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.000000000000000000000000000000000000000000000000000000000000000003383 233.0
DYD3_k127_2668783_4 Amidohydrolase K07045 - - 0.0000000000000000000000000000000000004993 153.0
DYD3_k127_2668783_5 Endoribonuclease L-PSP K09022 - 3.5.99.10 0.00000000000000000000000000000005764 130.0
DYD3_k127_2668783_6 Contains one ATP-binding region, ATPase-like domain (IPR003594) - - - 0.000000000000000000000000008705 128.0
DYD3_k127_2668783_7 hyperosmotic response K04065 - - 0.00000000000279 70.0
DYD3_k127_2668783_8 NMT1-like family K02051 - - 0.0000000006055 70.0
DYD3_k127_2668783_9 Cupin 2, conserved barrel domain protein - - - 0.00007388 50.0
DYD3_k127_2689279_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 1.029e-255 805.0
DYD3_k127_2689279_1 Phosphoglucose isomerase K00616,K13810 - 2.2.1.2,5.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004992 482.0
DYD3_k127_2689279_2 Ribose/Galactose Isomerase K01808 - 5.3.1.6 0.0000000000000000000000000000000000000000000000000000000006766 205.0
DYD3_k127_2689279_3 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000003777 195.0
DYD3_k127_2689279_4 Uncharacterized protein conserved in bacteria (DUF2064) K09931 - - 0.0000000000000000000000000000000000000001068 158.0
DYD3_k127_2702430_0 Probable RNA and SrmB- binding site of polymerase A K00970 - 2.7.7.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002409 436.0
DYD3_k127_2702430_1 Peptidase M16 K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002887 276.0
DYD3_k127_2702430_2 Adenylate cyclase - - - 0.000000000000000000000000000001438 123.0
DYD3_k127_2702430_3 Response regulator receiver K02483,K07658,K07668 - - 0.000000000000000000000008043 106.0
DYD3_k127_2702430_4 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 0.0000000000000000003046 90.0
DYD3_k127_2724441_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002754 562.0
DYD3_k127_2724441_1 Bile acid-inducible L-carnitine dehydratase protein F - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001999 385.0
DYD3_k127_2724441_2 Dehydratase K14449,K18290 - 4.2.1.148,4.2.1.56 0.0000000000000000000000000000000000000000000000000000000000009803 214.0
DYD3_k127_2724441_3 YHS domain K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000006281 166.0
DYD3_k127_2724441_4 hydrolase - - - 0.00000000000000000000000000003068 125.0
DYD3_k127_2724441_5 Amidohydrolase K03392 - 4.1.1.45 0.00000000000000000000000000004724 129.0
DYD3_k127_2724441_6 Putative phosphatase (DUF442) - - - 0.000000001091 66.0
DYD3_k127_2724441_7 Major facilitator superfamily - - - 0.0000006287 61.0
DYD3_k127_2725148_0 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.1.1.363,1.1.1.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002385 597.0
DYD3_k127_2725148_1 Beta-ketoacyl synthase, C-terminal domain K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001908 478.0
DYD3_k127_2725148_2 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 447.0
DYD3_k127_2725148_3 Glucokinase K00845 - 2.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008004 333.0
DYD3_k127_2725148_4 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000004752 248.0
DYD3_k127_2725148_5 geranylgeranyl reductase activity K21401 - 1.3.99.38 0.0000000000000000000000000000000000000000009629 172.0
DYD3_k127_2725148_6 Methyltransferase domain - - - 0.000000000000000000000000000000000001095 148.0
DYD3_k127_2725148_7 peroxiredoxin activity K03386,K03564,K16922 - 1.11.1.15 0.0000000000000000000006712 98.0
DYD3_k127_2725148_8 6-phosphogluconate dehydrogenase, C-terminal domain K00033 - 1.1.1.343,1.1.1.44 0.00000004211 54.0
DYD3_k127_2725148_9 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03386 - 1.11.1.15 0.00000007001 59.0
DYD3_k127_2732021_0 Metallopeptidase family M24 - - - 0.000000000000000000003493 107.0
DYD3_k127_2732021_1 ABC transporter (Periplasmic binding protein) K02051 - - 0.00000000000000002693 91.0
DYD3_k127_2732021_2 NMT1-like family - - - 0.0000171 55.0
DYD3_k127_2735003_0 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002189 329.0
DYD3_k127_2735003_1 Histone methylation protein DOT1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005936 308.0
DYD3_k127_2735003_2 Histone methylation protein DOT1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006217 267.0
DYD3_k127_2735003_3 Metallopeptidase family M24 - - - 0.0000000000000000000000000000000000000000000000000000001279 206.0
DYD3_k127_2739066_0 3-octaprenyl-4-hydroxybenzoate carboxy-lyase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003522 576.0
DYD3_k127_2739066_1 thiamine-containing compound biosynthetic process K02051 - - 0.0000000000000000000000000000000000000003559 163.0
DYD3_k127_2739066_10 Cupin 2, conserved barrel domain protein - - - 0.00005449 52.0
DYD3_k127_2739066_11 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K02051 - - 0.00008059 54.0
DYD3_k127_2739066_2 TIGRFAM chromate transporter, chromate ion transporter (CHR) family K07240 - - 0.0000000000000000000002107 107.0
DYD3_k127_2739066_3 thiamine-containing compound biosynthetic process K02051 - - 0.000000000000000002774 96.0
DYD3_k127_2739066_4 thiamine-containing compound biosynthetic process K02051 - - 0.00000000000000007098 92.0
DYD3_k127_2739066_5 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K08234 - - 0.000000000000001683 81.0
DYD3_k127_2739066_6 Major facilitator superfamily MFS_1 - - - 0.0000000001216 64.0
DYD3_k127_2739066_7 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K01759 - 4.4.1.5 0.0000000006333 65.0
DYD3_k127_2739066_8 Chromate transporter K07240 - - 0.000001111 59.0
DYD3_k127_2739066_9 metabolite transporter - - - 0.00001757 54.0
DYD3_k127_2746516_0 NADH dehydrogenase (ubiquinone) activity K14089 - - 2.916e-232 724.0
DYD3_k127_2746516_1 Tripartite tricarboxylate transporter TctA family - - - 1.437e-200 636.0
DYD3_k127_2746516_2 MmgE/PrpD family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003892 357.0
DYD3_k127_2746516_3 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006745 335.0
DYD3_k127_2746516_4 Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB) K01856,K02549 - 4.2.1.113,5.5.1.1 0.0000000000000000000000000000000000000000000009449 182.0
DYD3_k127_2746516_6 Cupin - - - 0.0004761 48.0
DYD3_k127_2755019_0 PFAM FAD linked oxidase domain protein K00102,K00104 - 1.1.2.4,1.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005163 517.0
DYD3_k127_2755019_1 4Fe-4S dicluster domain K11473 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001423 416.0
DYD3_k127_2755019_2 PFAM FAD linked oxidase domain protein K11472 - - 0.000000000000000000000000000000000000000000000000000000001833 211.0
DYD3_k127_2755019_3 STAS domain - - - 0.000000000002284 76.0
DYD3_k127_2755019_4 Beta-lactamase superfamily domain - - - 0.000000001543 62.0
DYD3_k127_2798645_0 elongation factor Tu domain 2 protein K06207 - - 5.809e-237 747.0
DYD3_k127_2798645_1 ABC transporter K06147,K18890 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 569.0
DYD3_k127_2798645_10 Putative aminopeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000001481 229.0
DYD3_k127_2798645_11 Methyltransferase domain K00570 - 2.1.1.17,2.1.1.71 0.00000000000000000000000000000000000000000000000007104 185.0
DYD3_k127_2798645_12 AsmA-like C-terminal region - - - 0.000000000000000000000000000000000000000000000002342 199.0
DYD3_k127_2798645_13 Glyoxalase-like domain K06996 - - 0.0000000000000000000000000000000000000003115 152.0
DYD3_k127_2798645_14 PFAM phospholipase Carboxylesterase K06999 - - 0.00000000000000000000000000000002448 134.0
DYD3_k127_2798645_15 Mut7-C RNAse domain K09122 - - 0.000000000000000000000000000006951 124.0
DYD3_k127_2798645_16 ABC transporter substrate-binding protein K15551 - - 0.000000000000007674 85.0
DYD3_k127_2798645_17 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000000003623 74.0
DYD3_k127_2798645_18 cell redox homeostasis K03671 - - 0.0000000000004931 75.0
DYD3_k127_2798645_19 Domain of unknown function DUF87 - - - 0.00000000008864 68.0
DYD3_k127_2798645_2 ABC transporter transmembrane K18889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 480.0
DYD3_k127_2798645_20 PFAM Uncharacterised protein family (UPF0104) K07027 - - 0.00000001273 64.0
DYD3_k127_2798645_21 DNA binding domain, excisionase family - - - 0.0007961 44.0
DYD3_k127_2798645_3 smart pdz dhr glgf K04771,K04772 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 388.0
DYD3_k127_2798645_4 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003589 372.0
DYD3_k127_2798645_5 Belongs to the peptidase M48B family K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 368.0
DYD3_k127_2798645_6 Putative ATP-binding cassette K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002418 383.0
DYD3_k127_2798645_7 Acts as a magnesium transporter K06213 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008577 321.0
DYD3_k127_2798645_8 ATPases associated with a variety of cellular activities K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004098 292.0
DYD3_k127_2798645_9 PFAM transglutaminase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007757 258.0
DYD3_k127_2823792_0 Amidohydrolase K03392 - 4.1.1.45 0.0000000000000000000000000000000000000000000000000000005661 205.0
DYD3_k127_2823792_1 Amidohydrolase family K06015 - 3.5.1.81 0.000000000000000000000000000000000008656 151.0
DYD3_k127_2823792_2 Histone methylation protein DOT1 - - - 0.0000004965 54.0
DYD3_k127_2825838_0 PFAM peptidase M3A and M3B thimet oligopeptidase F K08602 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001946 345.0
DYD3_k127_2825838_1 Belongs to the CinA family K03742 - 3.5.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003582 332.0
DYD3_k127_2825838_2 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000009196 261.0
DYD3_k127_2825838_3 Circadian clock protein KaiC K08482 - - 0.000000000000000000000000000000000711 139.0
DYD3_k127_2825838_4 Belongs to the HSP15 family K04762 - - 0.000000000000000000000000000000001893 134.0
DYD3_k127_2825838_5 SelR domain K07305 - 1.8.4.12 0.0000000000000000000000000001883 117.0
DYD3_k127_2825838_6 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000006808 114.0
DYD3_k127_2860638_0 Conserved carboxylase domain K01571 - 4.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005844 286.0
DYD3_k127_2860638_1 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) - - - 0.0000000000000000000000000000000000000000000000000000000002393 207.0
DYD3_k127_2873340_0 Conserved carboxylase domain K01571 - 4.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005217 346.0
DYD3_k127_2873340_1 Catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia - - - 0.000000000000000000000000000000000000000000000000000000000000000000228 243.0
DYD3_k127_2873340_2 - - - - 0.000000000000000000001703 98.0
DYD3_k127_288082_0 ATP-grasp domain K01905,K22224 - 6.2.1.13 9.247e-294 923.0
DYD3_k127_288082_1 Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis K03182 - 4.1.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 448.0
DYD3_k127_288082_10 Iron-containing redox enzyme K06137 - 1.3.3.11 0.0000005876 59.0
DYD3_k127_288082_2 Pfam Cupin K00450,K11948 - 1.13.11.38,1.13.11.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002921 282.0
DYD3_k127_288082_3 4,5-dihydroxyphthalate decarboxylase K04102 - 4.1.1.55 0.00000000000000000000000000000000000000000000000000006012 199.0
DYD3_k127_288082_4 PFAM Transglycosylase-associated protein - - - 0.00000000000000000000000000004257 119.0
DYD3_k127_288082_5 - - - - 0.0000000000000000000000002607 108.0
DYD3_k127_288082_6 Response regulator receiver - - - 0.0000000000000000000001391 101.0
DYD3_k127_288082_7 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.000000000000007775 77.0
DYD3_k127_288082_8 Helix-turn-helix domain - - - 0.000000008694 59.0
DYD3_k127_288082_9 Neutral zinc metallopeptidase K07054 - - 0.000000101 54.0
DYD3_k127_2886197_0 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000176 561.0
DYD3_k127_2886197_1 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639,K00652,K01906 - 2.3.1.29,2.3.1.47,6.2.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004968 399.0
DYD3_k127_2886197_2 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000226 244.0
DYD3_k127_2886197_3 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833 - 2.6.1.62 0.000000000000000000000000000000000000000000000000000000000000000002012 235.0
DYD3_k127_297721_0 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 2.187e-226 709.0
DYD3_k127_297721_1 Probable RNA and SrmB- binding site of polymerase A K00974 - 2.7.7.72 0.00000000000000000000000000000000000000000000000008993 180.0
DYD3_k127_297721_2 Catalyzes the formation of S-adenosylmethionine from methionine and ATP K00789 - 2.5.1.6 0.000000000002002 70.0
DYD3_k127_3000793_0 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.000000000000000000000000000000000000000000000000000000000000002127 233.0
DYD3_k127_3000793_1 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000003438 193.0
DYD3_k127_3000793_2 Predicted permease K07089 - - 0.000000000000000000000000000000000006949 143.0
DYD3_k127_3000793_3 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls - - - 0.0000000000000000000000000000000007366 146.0
DYD3_k127_3000793_4 Belongs to the 'phage' integrase family K04763 - - 0.0000000000002434 72.0
DYD3_k127_3025450_0 O-methyltransferase activity - GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004985 578.0
DYD3_k127_3025450_1 Amidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002229 439.0
DYD3_k127_3025450_2 ABC-type dipeptide transport system periplasmic component K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001916 384.0
DYD3_k127_3025450_3 Binding-protein-dependent transport system inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000973 351.0
DYD3_k127_3025450_4 Peptidase family M28 K06016 - 3.5.1.6,3.5.1.87 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000238 359.0
DYD3_k127_3025450_5 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005478 293.0
DYD3_k127_3025450_6 COG0402 Cytosine deaminase and related metal-dependent hydrolases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001845 301.0
DYD3_k127_3025450_7 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.0000000000000000000000000000000000000000000000000000006173 200.0
DYD3_k127_3025875_0 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain - - - 2.061e-260 820.0
DYD3_k127_3025875_1 PFAM Haloacid dehalogenase-like hydrolase - - - 0.0000000005405 62.0
DYD3_k127_3025875_2 TIGRFAM HAD-superfamily hydrolase, subfamily IIB - - - 0.000001064 52.0
DYD3_k127_3044575_0 Belongs to the GARS family K01945 - 6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000798 502.0
DYD3_k127_3044575_1 Catalyzes the NAD( )-dependent oxidative deamination of L-alanine to pyruvate, and the reverse reaction, the reductive amination of pyruvate K19244 GO:0000166,GO:0000286,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006522,GO:0006807,GO:0008150,GO:0008152,GO:0009078,GO:0009987,GO:0016491,GO:0016638,GO:0019752,GO:0036094,GO:0042802,GO:0042803,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046983,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901564,GO:1901605 1.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000001763 274.0
DYD3_k127_3044575_2 AIR carboxylase K01588 - 5.4.99.18 0.000000000000000000000000000000000000000000000000000000001013 205.0
DYD3_k127_3044575_3 Telomere recombination K07566 - 2.7.7.87 0.0000000000000000000000000000000000000000000003654 177.0
DYD3_k127_3044575_4 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.000000000000000000001298 94.0
DYD3_k127_3048058_0 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 472.0
DYD3_k127_3048058_1 PFAM ATPase associated with various cellular activities, AAA_5 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004382 385.0
DYD3_k127_3048058_10 Iron-containing redox enzyme K06137 - 1.3.3.11 0.0000000000000001539 89.0
DYD3_k127_3048058_11 Tetratricopeptide repeat-like domain - - - 0.00000000002473 72.0
DYD3_k127_3048058_2 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 362.0
DYD3_k127_3048058_3 VWA domain containing CoxE-like protein K07161 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 329.0
DYD3_k127_3048058_4 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002391 265.0
DYD3_k127_3048058_5 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000003222 243.0
DYD3_k127_3048058_6 Putative cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000005673 226.0
DYD3_k127_3048058_7 Bifunctional nuclease K03617,K08999 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000812 162.0
DYD3_k127_3048058_8 NUDIX hydrolase - - - 0.000000000000000000000000000000000000003728 156.0
DYD3_k127_3048058_9 Transport and Golgi organisation 2 - - - 0.0000000000000000000000000001582 124.0
DYD3_k127_3056343_0 FAD linked oxidase - - - 1.845e-212 665.0
DYD3_k127_3056343_1 PFAM Transketolase central region K00162 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 385.0
DYD3_k127_3056343_2 Dehydrogenase E1 component K00161 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005688 383.0
DYD3_k127_3056343_3 Pyruvate 2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit K00162,K11381 - 1.2.4.1,1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001454 349.0
DYD3_k127_3056343_4 PFAM dehydrogenase, E1 component K21416 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 306.0
DYD3_k127_3056343_5 Cupin domain - - - 0.0000000000000000000000000000002813 127.0
DYD3_k127_3056343_6 NMT1-like family K02051 - - 0.000000000000000001791 97.0
DYD3_k127_3056343_7 EamA-like transporter family - - - 0.000000000000014 84.0
DYD3_k127_3090477_0 Biotin carboxylase C-terminal domain K01961 - 6.3.4.14,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002857 564.0
DYD3_k127_3090477_1 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K01571,K02160 - 4.1.1.3 0.0000000000000000000000000001502 121.0
DYD3_k127_3098051_0 FAD dependent oxidoreductase K13796 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007559 475.0
DYD3_k127_3098051_1 MmgE/PrpD family - - - 0.00000000000000000000000000000000000000000000000000000000000002185 229.0
DYD3_k127_3098051_2 nucleotidyltransferase activity K07075 - - 0.0000000007024 63.0
DYD3_k127_31143_0 Cytochrome bd terminal oxidase subunit I K00425 - 1.10.3.14 2.933e-196 620.0
DYD3_k127_31143_1 Threonine synthase K01733 - 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008887 471.0
DYD3_k127_31143_10 decarboxylase K01607 - 4.1.1.44 0.0000000000000000000000000000000001488 139.0
DYD3_k127_31143_11 Aldo/keto reductase family - - - 0.0000000000000000000000000000006309 125.0
DYD3_k127_31143_12 Sodium/hydrogen exchanger family K03316 - - 0.00000000000000000000000000003328 118.0
DYD3_k127_31143_13 membrane - - - 0.000000000000000000000000001161 123.0
DYD3_k127_31143_14 - - - - 0.00000000000000001121 91.0
DYD3_k127_31143_15 Evidence 4 Homologs of previously reported genes of K03975 - - 0.00000002394 56.0
DYD3_k127_31143_2 Hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 422.0
DYD3_k127_31143_3 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001946 349.0
DYD3_k127_31143_4 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001671 306.0
DYD3_k127_31143_5 SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006272 289.0
DYD3_k127_31143_6 Cytochrome bd terminal oxidase subunit II K00426 - 1.10.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007929 289.0
DYD3_k127_31143_7 UV damage endonuclease UvdE K13281 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003321 282.0
DYD3_k127_31143_8 Amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003671 281.0
DYD3_k127_31143_9 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000006352 140.0
DYD3_k127_31374_0 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004378 420.0
DYD3_k127_31374_1 DeoC/LacD family aldolase K08321 - 2.3.1.245 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005938 362.0
DYD3_k127_31374_10 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.000000000000000000000003131 105.0
DYD3_k127_31374_11 Binds together with S18 to 16S ribosomal RNA K02990 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000001251 91.0
DYD3_k127_31374_2 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.000000000000000000000000000000000000000000000000000000000000000001311 237.0
DYD3_k127_31374_3 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.00000000000000000000000000000000000000000000000000003898 192.0
DYD3_k127_31374_4 Inositol monophosphatase K01092 GO:0003674,GO:0003824,GO:0005975,GO:0006020,GO:0006066,GO:0006793,GO:0006796,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008934,GO:0009056,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019637,GO:0019751,GO:0023052,GO:0042578,GO:0043647,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0046164,GO:0046174,GO:0046434,GO:0046838,GO:0046855,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0052745,GO:0052834,GO:0065007,GO:0071545,GO:0071704,GO:1901575,GO:1901615,GO:1901616 3.1.3.25 0.000000000000000000000000000000000000000000000000526 181.0
DYD3_k127_31374_5 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000008037 171.0
DYD3_k127_31374_6 binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000003714 148.0
DYD3_k127_31374_7 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000009883 147.0
DYD3_k127_31374_8 Could be involved in septation K06412 - - 0.000000000000000000000000000000000002937 139.0
DYD3_k127_31374_9 Predicted membrane protein (DUF2232) - - - 0.0000000000000000000000000003172 126.0
DYD3_k127_3141274_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 506.0
DYD3_k127_3141274_1 PFAM Amidohydrolase 2 - - - 0.0000000000000001912 92.0
DYD3_k127_3141274_2 Amidohydrolase - - - 0.0000004024 52.0
DYD3_k127_3144166_0 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002646 329.0
DYD3_k127_3144166_1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.0000000000000000000000000000000000000000000000003546 189.0
DYD3_k127_3145618_0 Asparaginase K13051 - 3.4.19.5 0.0000000000000000000000000000000000000000000001339 173.0
DYD3_k127_3145618_1 Putative cyclase K07130 - 3.5.1.9 0.00000000000000000000000000000000000000000002449 168.0
DYD3_k127_3145618_2 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.000000000000000001078 97.0
DYD3_k127_3145618_3 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain - - - 0.000002137 51.0
DYD3_k127_3147801_0 WYL domain K13572 - - 0.0000000000000000000000000000000000000000001033 164.0
DYD3_k127_3147801_1 Helix-turn-helix domain - - - 0.000000000000000000000000000000000000002072 150.0
DYD3_k127_3147801_2 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.000000000000000000000000000000006364 130.0
DYD3_k127_3147801_3 response to oxidative stress K04063 - - 0.00000000000000000000000000008007 121.0
DYD3_k127_3147801_4 WYL domain K13572 - - 0.00000000000000000000001899 102.0
DYD3_k127_3147801_5 CBS domain K04767 - - 0.00000000000000000000427 104.0
DYD3_k127_3147801_6 CoA binding domain K06929 - - 0.000000000004511 77.0
DYD3_k127_3147801_7 WYL domain K13572 - - 0.000000005472 61.0
DYD3_k127_3160690_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 1.004e-203 657.0
DYD3_k127_3160690_1 thiamine-containing compound biosynthetic process K02051 - - 0.0000000000000001537 91.0
DYD3_k127_3224095_0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K15778 - 5.4.2.2,5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003206 520.0
DYD3_k127_3224095_1 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097,K22024 - 1.1.1.262,1.1.1.408,1.1.1.409 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004985 302.0
DYD3_k127_3234852_0 Tripartite tricarboxylate transporter TctA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009165 442.0
DYD3_k127_3234852_1 amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000001614 203.0
DYD3_k127_325166_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 3.411e-248 776.0
DYD3_k127_325166_1 PFAM DAHP synthetase I KDSA K01627 - 2.5.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000189 358.0
DYD3_k127_325166_2 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000513 267.0
DYD3_k127_325166_3 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K02051 - - 0.000000008325 66.0
DYD3_k127_3253735_0 Belongs to the UbiD family K01612 - 4.1.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005053 563.0
DYD3_k127_3253735_1 Belongs to the UbiD family K03182,K16874 - 4.1.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004114 459.0
DYD3_k127_3253735_10 NMT1-like family K02051 - - 0.0000000004746 71.0
DYD3_k127_3253735_11 NMT1-like family K02051,K15553 - - 0.0000003158 61.0
DYD3_k127_3253735_12 Tripartite tricarboxylate transporter TctB family - - - 0.0002835 49.0
DYD3_k127_3253735_13 Iron-containing redox enzyme K06137 - 1.3.3.11 0.0008778 50.0
DYD3_k127_3253735_2 Tripartite tricarboxylate transporter TctA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003926 437.0
DYD3_k127_3253735_3 PFAM luciferase family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006587 379.0
DYD3_k127_3253735_4 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000003517 218.0
DYD3_k127_3253735_5 PAS fold - - - 0.00000000000000000000000000000000000005313 158.0
DYD3_k127_3253735_6 sulfopyruvate decarboxylase, alpha subunit K06034 - 4.1.1.79 0.0000000000000000000000000000006795 128.0
DYD3_k127_3253735_7 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000009141 132.0
DYD3_k127_3253735_8 Pfam Cupin K00450,K11948 - 1.13.11.38,1.13.11.4 0.000000000000000000000000005035 112.0
DYD3_k127_3253735_9 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K13039 - 4.1.1.79 0.000000000000000000007752 101.0
DYD3_k127_3258047_0 Glycosyl hydrolase family 65, C-terminal domain - - - 0.0 1658.0
DYD3_k127_3258047_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 1.918e-269 834.0
DYD3_k127_3258047_2 methylamine metabolic process K15977 - - 0.000000000000000000000000000000000000003922 151.0
DYD3_k127_3272155_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1171.0
DYD3_k127_3272155_1 MmgE/PrpD family - - - 6.126e-222 696.0
DYD3_k127_3272155_10 ATPases associated with a variety of cellular activities K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002868 308.0
DYD3_k127_3272155_11 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001274 284.0
DYD3_k127_3272155_12 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001295 263.0
DYD3_k127_3272155_13 Thiamine pyrophosphate enzyme, central domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000003845 236.0
DYD3_k127_3272155_14 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 GO:0000217,GO:0000400,GO:0000724,GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003824,GO:0004386,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007154,GO:0008150,GO:0008152,GO:0009314,GO:0009378,GO:0009379,GO:0009432,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0022607,GO:0031668,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0033554,GO:0034641,GO:0042802,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051259,GO:0051260,GO:0051262,GO:0051276,GO:0051289,GO:0051716,GO:0065003,GO:0071103,GO:0071496,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1902494 3.6.4.12 0.0000000000000000000000000000000000000000000000037 186.0
DYD3_k127_3272155_15 COG0491 Zn-dependent hydrolases, including glyoxylases K01069 - 3.1.2.6 0.00000000000000000000000000000000000000000000009477 179.0
DYD3_k127_3272155_16 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.0000000000000000000000000000000000000000006234 167.0
DYD3_k127_3272155_17 Crossover junction endodeoxyribonuclease RuvC K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.00000000000000000000000000000000000000007899 157.0
DYD3_k127_3272155_18 thiamine-containing compound biosynthetic process K02051 - - 0.0000000000000000000000003521 117.0
DYD3_k127_3272155_19 Protein of unknown function (DUF2905) - - - 0.00000000000000000001709 92.0
DYD3_k127_3272155_2 histidine kinase, HAMP K13598 - 2.7.13.3 1.722e-205 662.0
DYD3_k127_3272155_20 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases K01628 - 4.1.2.17 0.00000000000000000005747 99.0
DYD3_k127_3272155_21 Uncharacterized conserved protein (DUF2203) - - - 0.0003393 47.0
DYD3_k127_3272155_3 Holliday junction DNA helicase ruvB C-terminus K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004748 472.0
DYD3_k127_3272155_4 Zinc-dependent metalloprotease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007758 472.0
DYD3_k127_3272155_5 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002132 436.0
DYD3_k127_3272155_6 UDP-3-O-acyl N-acetylglycosamine deacetylase K02535,K13599 - 3.5.1.108 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003274 394.0
DYD3_k127_3272155_7 Branched-chain amino acid transport system / permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005211 361.0
DYD3_k127_3272155_8 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009581 336.0
DYD3_k127_3272155_9 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003209 317.0
DYD3_k127_3282639_0 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain K00261,K00262 - 1.4.1.3,1.4.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002702 512.0
DYD3_k127_3282639_1 COG1960 Acyl-CoA dehydrogenases K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003919 351.0
DYD3_k127_3282639_10 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000003651 115.0
DYD3_k127_3282639_2 acyl-CoA dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 299.0
DYD3_k127_3282639_3 NAD dependent epimerase/dehydratase family K07535 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005833 277.0
DYD3_k127_3282639_4 Enoyl-CoA hydratase/isomerase K15866 - 5.3.3.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000001942 268.0
DYD3_k127_3282639_5 Amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002848 259.0
DYD3_k127_3282639_6 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000002777 232.0
DYD3_k127_3282639_7 PFAM short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000000000000000000000003806 228.0
DYD3_k127_3282639_8 PFAM ATPase, BadF BadG BcrA BcrD type - - - 0.0000000000000000000000000000000000000000000000002987 181.0
DYD3_k127_3282639_9 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00170 - 1.2.7.1 0.0000000000000000000000000004437 115.0
DYD3_k127_3294225_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 1.081e-195 621.0
DYD3_k127_3294225_1 Pyridoxal-phosphate dependent enzyme K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005677 548.0
DYD3_k127_3294225_10 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000000003694 74.0
DYD3_k127_3294225_11 - - - - 0.00000004913 61.0
DYD3_k127_3294225_12 Protein of unknown function (DUF3426) - - - 0.00002951 55.0
DYD3_k127_3294225_13 RNA polymerase sigma factor, sigma-70 family - - - 0.0003791 49.0
DYD3_k127_3294225_2 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00282 GO:0001505,GO:0003674,GO:0003824,GO:0004375,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005960,GO:0006082,GO:0006520,GO:0006544,GO:0006807,GO:0008150,GO:0008152,GO:0009069,GO:0009987,GO:0016491,GO:0016638,GO:0016642,GO:0017144,GO:0019752,GO:0032991,GO:0042133,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901605,GO:1902494,GO:1990204 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000343 443.0
DYD3_k127_3294225_3 Belongs to the cysteine synthase cystathionine beta- synthase family K01883,K12339 - 2.5.1.47,6.1.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004261 357.0
DYD3_k127_3294225_4 PFAM UBA THIF-type NAD FAD binding protein K21029 - 2.7.7.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000369 299.0
DYD3_k127_3294225_5 MmgE/PrpD family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001651 253.0
DYD3_k127_3294225_6 ECF sigma factor - - - 0.000000000000000000000000000000000000001498 153.0
DYD3_k127_3294225_7 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.00000000000000000000000000000000003881 137.0
DYD3_k127_3294225_8 Molybdopterin converting factor, small subunit K03636 - - 0.0000000000000000000000000000001285 125.0
DYD3_k127_3294225_9 TonB C terminal K03832 - - 0.000000000000000003665 94.0
DYD3_k127_3306185_0 Rieske (2fe-2S) K15060 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002557 348.0
DYD3_k127_3306185_1 COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit K15060 - - 0.000000000000000000000000002423 118.0
DYD3_k127_3306185_2 Bacterial extracellular solute-binding protein - - - 0.0000000000000009321 89.0
DYD3_k127_3312628_0 Substrate binding domain of ABC-type glycine betaine transport system K05845,K05846 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006631 533.0
DYD3_k127_3312628_1 ABC-type proline glycine betaine transport K05847 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003308 321.0
DYD3_k127_3312628_10 Protein of unknown function (DUF559) - - - 0.00001579 49.0
DYD3_k127_3312628_11 - - - - 0.00002534 52.0
DYD3_k127_3312628_12 Protein of unknown function (DUF559) - - - 0.0002547 45.0
DYD3_k127_3312628_2 Fatty acid desaturase - - - 0.000000000000000000000000000000000000000000000000000000000000001012 230.0
DYD3_k127_3312628_3 conserved protein (DUF2260) - - - 0.000000000000000000000000000000000000000000000000000000000004559 221.0
DYD3_k127_3312628_4 beta-N-acetylglucosaminidase K01197,K15719 GO:0003674,GO:0003824,GO:0004553,GO:0004563,GO:0005488,GO:0005515,GO:0005975,GO:0006464,GO:0006517,GO:0006807,GO:0008150,GO:0008152,GO:0009100,GO:0009987,GO:0015929,GO:0016231,GO:0016787,GO:0016798,GO:0019538,GO:0030246,GO:0036211,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901135,GO:1901564 2.3.1.48,3.2.1.169,3.2.1.35 0.0000000000000000000000000000000000000000000000000000006515 204.0
DYD3_k127_3312628_5 Sulfatase-modifying factor enzyme 1 K18912 - 1.14.99.50 0.000000000000000000000000000000000000000000000000000003922 200.0
DYD3_k127_3312628_6 LysE type translocator - - - 0.0000000000000000000000000000000000000000000000007175 182.0
DYD3_k127_3312628_7 - - - - 0.000000000000000001437 89.0
DYD3_k127_3312628_8 Protein of unknown function (DUF559) - - - 0.00000000002378 66.0
DYD3_k127_3312628_9 - - - - 0.0000000002637 63.0
DYD3_k127_3316211_0 Barrel-sandwich domain of CusB or HlyD membrane-fusion K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004071 351.0
DYD3_k127_3316211_1 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000235 334.0
DYD3_k127_3316211_2 Methionine biosynthesis protein MetW - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003102 260.0
DYD3_k127_3316211_3 FtsX-like permease family K02004 - - 0.00000000000000000000000000000000000000000000000000000000001242 212.0
DYD3_k127_3337209_0 Bacterial protein of unknown function (DUF924) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000223 293.0
DYD3_k127_3337209_1 RibD C-terminal domain - - - 0.0000000000000000000000000003354 115.0
DYD3_k127_3337209_2 PFAM Rhomboid family protein - - - 0.00000000000000351 83.0
DYD3_k127_3353894_0 dead deah K03724 - - 0.0 1413.0
DYD3_k127_3353894_1 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 8.75e-274 856.0
DYD3_k127_3353894_10 Polysaccharide biosynthesis protein K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006744 377.0
DYD3_k127_3353894_11 PFAM PfkB domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 374.0
DYD3_k127_3353894_12 Glycosyltransferase like family 2 K10012 - 2.4.2.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006147 372.0
DYD3_k127_3353894_13 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004731,GO:0006082,GO:0006139,GO:0006144,GO:0006168,GO:0006520,GO:0006555,GO:0006725,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009112,GO:0009113,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0017061,GO:0017144,GO:0018130,GO:0019438,GO:0019509,GO:0019752,GO:0034641,GO:0034654,GO:0042440,GO:0043094,GO:0043096,GO:0043101,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046083,GO:0046084,GO:0046112,GO:0046148,GO:0046394,GO:0046483,GO:0055086,GO:0071265,GO:0071267,GO:0071704,GO:0072521,GO:0072522,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000181 355.0
DYD3_k127_3353894_14 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 342.0
DYD3_k127_3353894_15 Cytochrome C assembly protein K02195 GO:0001539,GO:0002048,GO:0002049,GO:0003674,GO:0003824,GO:0004096,GO:0004601,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006518,GO:0006629,GO:0006643,GO:0006664,GO:0006807,GO:0006810,GO:0006928,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009237,GO:0009247,GO:0009636,GO:0009987,GO:0015886,GO:0016020,GO:0016021,GO:0016209,GO:0016491,GO:0016684,GO:0019184,GO:0019290,GO:0019748,GO:0031224,GO:0031226,GO:0034641,GO:0040011,GO:0042221,GO:0043043,GO:0043107,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044425,GO:0044459,GO:0044464,GO:0044550,GO:0046467,GO:0048870,GO:0050896,GO:0051179,GO:0051181,GO:0051186,GO:0051188,GO:0051234,GO:0051674,GO:0051716,GO:0055114,GO:0070887,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0071973,GO:0071975,GO:0071977,GO:0071978,GO:0097237,GO:0097588,GO:0098754,GO:0098869,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1901678,GO:1903509,GO:1990748 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002705 269.0
DYD3_k127_3353894_16 TIGRFAM signal peptidase I K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000001196 262.0
DYD3_k127_3353894_17 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.00000000000000000000000000000000000000000000000000000006564 200.0
DYD3_k127_3353894_18 Thioredoxin-like K02199,K03671 - - 0.0000000000000000000000000000000000000000000000002047 182.0
DYD3_k127_3353894_19 CcmB protein K02193,K02194 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0031224,GO:0031226,GO:0032991,GO:0042623,GO:0043190,GO:0044425,GO:0044459,GO:0044464,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1902494,GO:1902495,GO:1904949,GO:1990351 3.6.3.41 0.0000000000000000000000000000000000000000000008055 173.0
DYD3_k127_3353894_2 Isocitrate/isopropylmalate dehydrogenase K00031 - 1.1.1.42 2.587e-205 648.0
DYD3_k127_3353894_20 PFAM ABC transporter related K02193 - 3.6.3.41 0.0000000000000000000000000000000000000004017 158.0
DYD3_k127_3353894_21 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.000000000000000000000000000000002914 134.0
DYD3_k127_3353894_22 PFAM Conserved TM helix - - - 0.000000000000000000000000000008876 126.0
DYD3_k127_3353894_23 subunit of a heme lyase K02198,K02200 - - 0.000000000000000000000001589 120.0
DYD3_k127_3353894_24 - - - - 0.000000000007223 70.0
DYD3_k127_3353894_25 - - - - 0.00000007233 58.0
DYD3_k127_3353894_26 bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding K08365,K13640,K18997,K19057 - - 0.0000002048 57.0
DYD3_k127_3353894_27 SMART heat shock protein DnaJ domain protein K05516 - - 0.0000002968 53.0
DYD3_k127_3353894_28 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.000004111 50.0
DYD3_k127_3353894_3 PFAM Cytochrome C assembly protein K02198 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006759 572.0
DYD3_k127_3353894_4 UDP binding domain K00012 - 1.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 555.0
DYD3_k127_3353894_5 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 GO:0003674,GO:0003824,GO:0004774,GO:0004775,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016874,GO:0016877,GO:0016878,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000703 522.0
DYD3_k127_3353894_6 GDP-mannose 4,6 dehydratase K01710 - 4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004851 473.0
DYD3_k127_3353894_7 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005502 438.0
DYD3_k127_3353894_8 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007373 436.0
DYD3_k127_3353894_9 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 GO:0003674,GO:0003824,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016491,GO:0016614,GO:0016615,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 1.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000634 378.0
DYD3_k127_3355770_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 334.0
DYD3_k127_3355770_1 Belongs to the UbiD family K03182 - 4.1.1.98 0.0000000000000000000000000000000000000000006158 160.0
DYD3_k127_3355770_2 Bifunctional nuclease K03617,K08999 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000003245 145.0
DYD3_k127_3362454_0 Major Facilitator Superfamily - - - 0.000000000000000000000000002929 125.0
DYD3_k127_3362454_1 abc-type fe3 -hydroxamate transport system, periplasmic component - - - 0.00000000000000000000000001979 111.0
DYD3_k127_3362454_2 PFAM amidohydrolase - - - 0.000000000000000004971 87.0
DYD3_k127_3362454_3 abc-type fe3 -hydroxamate transport system, periplasmic component - - - 0.000000004378 57.0
DYD3_k127_3362454_4 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K02051 - - 0.000002676 58.0
DYD3_k127_3373846_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 1.521e-212 675.0
DYD3_k127_3373846_1 Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX K03405 - 6.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005805 569.0
DYD3_k127_3373846_10 Prephenate dehydrogenase K04517 - 1.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000009488 240.0
DYD3_k127_3373846_11 O-methyltransferase K00588 - 2.1.1.104 0.0000000000000000000000000000000000000000000000000000000000000000002303 235.0
DYD3_k127_3373846_12 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.000000000000000000000000000000000000000000000000000000000006398 214.0
DYD3_k127_3373846_13 Enoyl-(Acyl carrier protein) reductase K00059,K18009,K19548 - 1.1.1.100,1.1.1.304,1.1.1.385,1.1.1.76 0.000000000000000000000000000000000000000000000000000001835 201.0
DYD3_k127_3373846_14 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.00000000000000000000000000000000000000000000000002176 190.0
DYD3_k127_3373846_15 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.00000000000000000000000000000000000000000000000004489 189.0
DYD3_k127_3373846_16 Scavenger mRNA decapping enzyme C-term binding K19710 - 2.7.7.53 0.0000000000000000000000000000000000000000000000005676 179.0
DYD3_k127_3373846_17 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.00000000000000000000000000000000000000000000001204 178.0
DYD3_k127_3373846_18 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0009889,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2001141 - 0.00000000000000000000000003505 115.0
DYD3_k127_3373846_2 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 GO:0003674,GO:0003824,GO:0003866,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0071704,GO:1901576 2.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001901 443.0
DYD3_k127_3373846_3 Prephenate dehydratase K14170 - 4.2.1.51,5.4.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 398.0
DYD3_k127_3373846_4 Aminotransferase class I and II K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003325 388.0
DYD3_k127_3373846_5 Cobalamin synthesis protein cobW C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002598 340.0
DYD3_k127_3373846_6 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002156 340.0
DYD3_k127_3373846_7 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005912 296.0
DYD3_k127_3373846_8 von Willebrand factor (vWF) type A domain K07114 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005014 293.0
DYD3_k127_3373846_9 Peptidase family S49 K04773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006356 256.0
DYD3_k127_3384602_0 - K07275 - - 0.00000000000000000000000000000000000000941 149.0
DYD3_k127_3384602_1 PFAM Peptidase family M48 - - - 0.00000000000000002457 92.0
DYD3_k127_3384602_3 - - - - 0.0000001832 57.0
DYD3_k127_3416387_0 COG0145 N-methylhydantoinase A acetone carboxylase, beta subunit K01473 - 3.5.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002556 584.0
DYD3_k127_3416387_1 N-methylhydantoinase B acetone carboxylase alpha subunit K01474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006518,GO:0006575,GO:0006749,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0017168,GO:0034641,GO:0043603,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0051186,GO:0071704,GO:1901564 3.5.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 295.0
DYD3_k127_3444547_0 Putative methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005163 498.0
DYD3_k127_3444547_1 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 347.0
DYD3_k127_345081_0 ATP ADP translocase K03301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002457 529.0
DYD3_k127_345081_1 COG0656 Aldo keto reductases, related to diketogulonate reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002168 379.0
DYD3_k127_345081_2 4-phosphoerythronate dehydrogenase activity K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 375.0
DYD3_k127_345081_3 Integral membrane sensor signal transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002881 352.0
DYD3_k127_345081_4 response regulator, receiver K02483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000585 318.0
DYD3_k127_345081_5 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 331.0
DYD3_k127_345081_6 PFAM glycosyl transferase family 39 - - - 0.000000000000000000000000000000000000000000000000000000000149 226.0
DYD3_k127_345081_7 Psort location CytoplasmicMembrane, score 10.00 - - - 0.000000000000000000000000000000000000000002804 175.0
DYD3_k127_345081_8 ACT domain K03567 - - 0.0000000000000000000000000000000006117 137.0
DYD3_k127_345081_9 ADP-heptose-lipopolysaccharide heptosyltransferase activity K02843 - - 0.00000000000000000000001222 115.0
DYD3_k127_3470960_0 Sulfite reductase K00366,K00381,K00392 - 1.7.7.1,1.8.1.2,1.8.7.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003217 475.0
DYD3_k127_3470960_1 Tetrapyrrole (Corrin/Porphyrin) Methylases K02303,K13542 - 2.1.1.107,4.2.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002847 284.0
DYD3_k127_3470960_2 synthase K01719 - 4.2.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000001344 267.0
DYD3_k127_3470960_3 Sirohaem biosynthesis protein central K02304 - 1.3.1.76,4.99.1.4 0.0000000000000000000000000000000000000000000000002595 184.0
DYD3_k127_3470960_4 - - - - 0.00000000000000003342 88.0
DYD3_k127_3473872_0 TRAM domain K03215 - 2.1.1.190 0.000000000000000000000000000000000000000000000000000000000000000000000000000000261 281.0
DYD3_k127_3473872_1 Amidohydrolase K03392 - 4.1.1.45 0.000000000000000000000000000000000000000000000000000000462 207.0
DYD3_k127_3473872_2 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000003342 127.0
DYD3_k127_3477494_0 MMPL family K07003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002784 567.0
DYD3_k127_3477494_1 Photosynthesis system II assembly factor YCF48 - - - 0.000000000000000000000000000000000006501 149.0
DYD3_k127_3477494_2 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K02051 GO:0003674,GO:0005215 - 0.0005687 47.0
DYD3_k127_3482484_0 Amidohydrolase K07045 - - 0.0000000000000000000000000000000000000000000000000000002353 209.0
DYD3_k127_3482484_1 PFAM amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000001745 184.0
DYD3_k127_3482484_2 PFAM Peptidase family M48 - - - 0.0000000000000005271 83.0
DYD3_k127_3493739_0 Aldehyde dehydrogenase family K00128,K00135,K22187 - 1.2.1.16,1.2.1.20,1.2.1.3,1.2.1.79 5.224e-224 705.0
DYD3_k127_3493739_1 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 1.36e-213 687.0
DYD3_k127_3493739_2 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823,K07250 - 2.6.1.19,2.6.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002263 521.0
DYD3_k127_3493739_3 Tripartite tricarboxylate transporter TctA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001975 511.0
DYD3_k127_3493739_4 Tripartite tricarboxylate transporter TctA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002109 493.0
DYD3_k127_3493739_5 oxidoreductase activity, acting on CH-OH group of donors K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000623 314.0
DYD3_k127_3493739_6 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001282 298.0
DYD3_k127_3493739_7 PAC2 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005667 248.0
DYD3_k127_3493739_8 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000009537 204.0
DYD3_k127_3493739_9 photosynthesis - - - 0.00000000000000000000000000000000000000000002883 166.0
DYD3_k127_3500335_0 Insulinase (Peptidase family M16) K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004645 484.0
DYD3_k127_3500335_1 Glycosyl hydrolases family 15 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004778 278.0
DYD3_k127_3500335_2 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000004474 232.0
DYD3_k127_3500335_3 Peptidase M16 K07263 - - 0.0000000000000000000000000000000000000001827 158.0
DYD3_k127_3502630_0 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000388 338.0
DYD3_k127_3502630_1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000553 274.0
DYD3_k127_3502630_2 dienelactone hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000003992 217.0
DYD3_k127_3502630_3 Binding-protein-dependent transport system inner membrane component - - - 0.0000000000000000000000000000000000000000000000000000291 198.0
DYD3_k127_3502630_4 - - - - 0.00000000000000000000000000000000000000000003914 168.0
DYD3_k127_3502630_5 - - - - 0.000000000000000000000000003339 116.0
DYD3_k127_3502630_6 NMT1-like family K02051 - - 0.00002053 56.0
DYD3_k127_350661_0 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002223 599.0
DYD3_k127_350661_1 PFAM fumarate lyase K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006244 565.0
DYD3_k127_350661_2 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006971 488.0
DYD3_k127_350661_3 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003494 286.0
DYD3_k127_350661_4 Fibronectin type 3 domain - - - 0.000000001549 64.0
DYD3_k127_3550423_0 PFAM Hydantoinase oxoprolinase K01473 - 3.5.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008704 498.0
DYD3_k127_3550423_1 COGs COG3485 Protocatechuate 3 4-dioxygenase beta subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001322 273.0
DYD3_k127_3550423_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000005133 167.0
DYD3_k127_3561133_0 Belongs to the UbiD family K16874 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 385.0
DYD3_k127_3561133_1 nitrite transmembrane transporter activity K02575,K08223 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002203 327.0
DYD3_k127_3561133_10 NMT1-like family K02051 - - 0.0001644 53.0
DYD3_k127_3561133_2 Cell shape determining protein MreB Mrl K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006125 266.0
DYD3_k127_3561133_3 Binding-protein-dependent transport system inner membrane component K02050 - - 0.0000000000000000000000000000000000000000000000000001691 196.0
DYD3_k127_3561133_4 protein trimerization K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000005179 187.0
DYD3_k127_3561133_5 ornithine cyclodeaminase mu-crystallin K19244 - 1.4.1.1 0.000000000000000000000000000000001601 141.0
DYD3_k127_3561133_6 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000001339 106.0
DYD3_k127_3561133_7 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components - - - 0.000000000000000000004803 105.0
DYD3_k127_3561133_8 Amidohydrolase - - - 0.00000000000000588 86.0
DYD3_k127_3561133_9 ATPases associated with a variety of cellular activities K02049 - - 0.0000000000001737 79.0
DYD3_k127_357398_0 PFAM glycoside hydrolase family 77 K00705 - 2.4.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 614.0
DYD3_k127_357398_1 Elongation factor SelB, winged helix K03833 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008073 513.0
DYD3_k127_357398_2 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 - 2.9.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006229 439.0
DYD3_k127_357398_3 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002968 345.0
DYD3_k127_3583199_0 Amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000000000000000001131 232.0
DYD3_k127_3583199_1 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000003186 228.0
DYD3_k127_3583199_2 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000001924 192.0
DYD3_k127_3583199_3 EamA-like transporter family - - - 0.00000000000000000000000000000007349 131.0
DYD3_k127_3583199_4 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.00000000000000000000000000000007662 132.0
DYD3_k127_3583199_6 ABC transporter, phosphonate, periplasmic substrate-binding protein K02051 - - 0.000000002566 68.0
DYD3_k127_3600375_0 Rieske [2Fe-2S] domain K21323 - 1.14.13.229,1.14.19.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007009 307.0
DYD3_k127_3600375_1 PFAM Amidohydrolase 2 - - - 0.00000000003361 72.0
DYD3_k127_3622292_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 2.77e-210 662.0
DYD3_k127_3622292_1 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008477 603.0
DYD3_k127_3622292_10 ABC-type branched-chain amino acid transport systems ATPase component K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003761 300.0
DYD3_k127_3622292_11 abc transporter K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003356 280.0
DYD3_k127_3622292_12 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000008152 251.0
DYD3_k127_3622292_13 Sugar (and other) transporter K07552 - - 0.0000000000000000000000000000000000000000000000000000000000000382 229.0
DYD3_k127_3622292_14 Amidohydrolase K03392 - 4.1.1.45 0.000000000000000000000000000000000000000000000000000000292 206.0
DYD3_k127_3622292_15 PFAM amidohydrolase 2 - - - 0.000000000000000000000000000000000000000000000000000001495 203.0
DYD3_k127_3622292_16 Glutathione-dependent formaldehyde-activating enzyme - - - 0.000000000000000000000000000000000000000000000000000006068 192.0
DYD3_k127_3622292_17 Histone methylation protein DOT1 - - - 0.0000000000000000000000000000000000000000000000000000232 194.0
DYD3_k127_3622292_18 Conserved hypothetical protein (Lin0512_fam) - - - 0.000000000000000000000000000000000000004625 148.0
DYD3_k127_3622292_19 - - - - 0.00000000000000000000000000000000000006654 148.0
DYD3_k127_3622292_2 amino acid K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003324 554.0
DYD3_k127_3622292_20 FxsA cytoplasmic membrane protein K07113 - - 0.00000000000000000000000000000000003497 139.0
DYD3_k127_3622292_21 MAPEG family - - - 0.00000000000000000000000000000000005659 139.0
DYD3_k127_3622292_22 O-methyltransferase - - - 0.00000000000000000000000000000000006338 141.0
DYD3_k127_3622292_23 PFAM Radical SAM domain protein - - - 0.00000000000000000000000000000005161 132.0
DYD3_k127_3622292_24 Dienelactone hydrolase family K01061 - 3.1.1.45 0.0000000000000000000000000006995 124.0
DYD3_k127_3622292_25 - - - - 0.000000000000000000000001114 104.0
DYD3_k127_3622292_26 Serine aminopeptidase, S33 K01055,K16050 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0016787,GO:0016822,GO:0016823,GO:0030312,GO:0034820,GO:0040007,GO:0044110,GO:0044116,GO:0044117,GO:0044403,GO:0044419,GO:0044464,GO:0051704,GO:0071944 3.1.1.24,3.7.1.17 0.00000000000000000000006408 110.0
DYD3_k127_3622292_27 thiamine-containing compound biosynthetic process K02051 - - 0.000000000000000102 87.0
DYD3_k127_3622292_28 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000002969 87.0
DYD3_k127_3622292_29 Hemerythrin HHE cation binding domain - - - 0.0000000000000178 80.0
DYD3_k127_3622292_3 ornithine cyclodeaminase K01750 - 4.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004605 537.0
DYD3_k127_3622292_30 conserved protein, contains double-stranded beta-helix domain - - - 0.00000000000002671 77.0
DYD3_k127_3622292_31 Transcription factor zinc-finger K09981 - - 0.00000000000227 70.0
DYD3_k127_3622292_32 thiamine-containing compound biosynthetic process K02051 - - 0.00000000001565 73.0
DYD3_k127_3622292_34 DNA excision K02806 - - 0.0000000006754 64.0
DYD3_k127_3622292_35 Conserved hypothetical protein (Lin0512_fam) - - - 0.00005738 49.0
DYD3_k127_3622292_4 DNA polymerase Ligase (LigD) K01971,K10747 GO:0000166,GO:0000287,GO:0000726,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0003896,GO:0003899,GO:0003909,GO:0003910,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0004652,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006266,GO:0006269,GO:0006281,GO:0006302,GO:0006303,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008144,GO:0008150,GO:0008152,GO:0008296,GO:0008297,GO:0008310,GO:0008408,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016874,GO:0016886,GO:0016895,GO:0017076,GO:0018130,GO:0019438,GO:0030145,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032774,GO:0033554,GO:0034061,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0070566,GO:0071704,GO:0071897,GO:0071944,GO:0090304,GO:0090305,GO:0097159,GO:0097367,GO:0097747,GO:0140097,GO:0140098,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576 6.5.1.1,6.5.1.6,6.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003539 517.0
DYD3_k127_3622292_5 Transmembrane secretion effector - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006495 403.0
DYD3_k127_3622292_6 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003903 368.0
DYD3_k127_3622292_7 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003542 359.0
DYD3_k127_3622292_8 CoA-transferase family III K07749 - 2.8.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003989 327.0
DYD3_k127_3622292_9 Rieske (2fe-2S) K15060 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000019 316.0
DYD3_k127_3640758_0 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.0000000000000000000000000000000000000003853 170.0
DYD3_k127_3640758_1 Protein of unknown function (DUF1318) - - - 0.00000000000000000000000000000005272 128.0
DYD3_k127_364801_0 PFAM FAD dependent oxidoreductase K09835,K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31,5.2.1.13 2.126e-202 642.0
DYD3_k127_364801_1 Belongs to the FPP GGPP synthase family - - - 0.000000000000000000000000000000000000000000000001403 191.0
DYD3_k127_364801_2 B12 binding domain - - - 0.00000000001183 70.0
DYD3_k127_364801_3 sequence-specific DNA binding - - - 0.000001322 53.0
DYD3_k127_3654305_0 Alanine dehydrogenase/PNT, N-terminal domain K00259 - 1.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001956 452.0
DYD3_k127_3654305_1 Conserved carboxylase domain K01571 - 4.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005108 396.0
DYD3_k127_3654305_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003081 389.0
DYD3_k127_3654305_3 Conserved carboxylase domain K01571 - 4.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003307 375.0
DYD3_k127_3654305_4 Amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000181 283.0
DYD3_k127_3654305_5 hydrolase activity, acting on ester bonds - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003229 275.0
DYD3_k127_3654305_6 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006226 241.0
DYD3_k127_3654305_7 Protein of unknown function (DUF423) - - - 0.0000000000000000000000000000000000000000007101 165.0
DYD3_k127_3654305_8 Binding-protein-dependent transport system inner membrane component K02050 - - 0.0000001183 56.0
DYD3_k127_3657987_0 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002695 369.0
DYD3_k127_3657987_1 Belongs to the GST superfamily K11209 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000128 285.0
DYD3_k127_3657987_2 TIGRFAM drug resistance transporter, EmrB QacA subfamily - - - 0.000000000000000000000000000000000000000000000000000000000000006838 234.0
DYD3_k127_3657987_3 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000002381 216.0
DYD3_k127_3664578_0 2-methylcitrate dehydratase K01720 GO:0003674,GO:0003824,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019541,GO:0019679,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0046459,GO:0047547,GO:0071704 4.2.1.79 1.335e-214 675.0
DYD3_k127_3664578_1 Citrate synthase, C-terminal domain K01659 - 2.3.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000156 516.0
DYD3_k127_3664578_10 PFAM Conserved carboxylase region K01571,K01960 - 4.1.1.3,6.4.1.1 0.0000000000001351 73.0
DYD3_k127_3664578_11 Cupin 2, conserved barrel domain protein - - - 0.0000000000001879 75.0
DYD3_k127_3664578_12 enoyl-CoA hydratase K15866 - 5.3.3.18 0.0008282 42.0
DYD3_k127_3664578_2 TIGRFAM acetyl coenzyme A synthetase (ADP forming), alpha domain K01905,K22224 - 6.2.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002342 449.0
DYD3_k127_3664578_3 Zinc-binding dehydrogenase K19745 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003561 400.0
DYD3_k127_3664578_4 PFAM Amidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008201 355.0
DYD3_k127_3664578_5 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004729 334.0
DYD3_k127_3664578_6 Phosphoenolpyruvate phosphomutase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005858 293.0
DYD3_k127_3664578_7 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.000000000000000000000000000000000005498 149.0
DYD3_k127_3664578_8 Enoyl-CoA hydratase/isomerase K01715 - 4.2.1.17 0.000000000000000000000000000001079 132.0
DYD3_k127_3669427_0 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K14162 - 2.7.7.7 0.0 1308.0
DYD3_k127_367581_0 Cyclodeaminase K01750,K19244 - 1.4.1.1,4.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001244 282.0
DYD3_k127_367581_1 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000009949 236.0
DYD3_k127_367581_2 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000004508 197.0
DYD3_k127_367581_3 nitrite transmembrane transporter activity K02575,K08223 - - 0.000000000000000000000000000000000000000001215 171.0
DYD3_k127_367581_4 ornithine cyclodeaminase mu-crystallin K01750 - 4.3.1.12 0.00000000000000000000000000000000000003831 158.0
DYD3_k127_367581_5 haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000001967 129.0
DYD3_k127_367581_6 PFAM Peptidase M23 - - - 0.0000000000000000000174 93.0
DYD3_k127_367581_7 CBS domain K04767 - - 0.00000000000003011 81.0
DYD3_k127_367581_8 Belongs to the UPF0235 family K09131 - - 0.0000000000003594 73.0
DYD3_k127_369737_0 Conserved carboxylase domain K01571 - 4.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002783 383.0
DYD3_k127_369737_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004827 290.0
DYD3_k127_369737_2 Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002179 271.0
DYD3_k127_369737_3 Belongs to the phosphoglycerate mutase family K15634 - 5.4.2.12 0.00000000000000000000000000000000000000000000000000000000000002745 220.0
DYD3_k127_369737_4 to the N-terminal domain of Lon protease K01338,K07157 - 3.4.21.53 0.0000000000000000000000000000000000000000002378 166.0
DYD3_k127_369737_5 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000321 51.0
DYD3_k127_3706235_0 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003911 535.0
DYD3_k127_3706235_1 TIM-barrel fold metal-dependent hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001352 259.0
DYD3_k127_3706235_2 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000001047 235.0
DYD3_k127_3706235_3 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000000000002814 107.0
DYD3_k127_3712704_0 Bacterial extracellular solute-binding protein K02012 - - 0.00000000000000000000000001721 123.0
DYD3_k127_3712704_1 COG1840 ABC-type Fe3 transport system, periplasmic component K02012 - - 0.0000068 53.0
DYD3_k127_3719843_0 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002139 312.0
DYD3_k127_3719843_1 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000004196 233.0
DYD3_k127_3719843_2 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.0000000000000000000000000000000000000000000000000005001 199.0
DYD3_k127_3719843_3 ATPases associated with a variety of cellular activities K01996 - - 0.000000000000000000000000000000000000000000000004752 176.0
DYD3_k127_3719843_4 Tripartite tricarboxylate transporter family receptor - - - 0.00008495 50.0
DYD3_k127_3732778_0 Phosphoglucomutase/phosphomannomutase, C-terminal domain K01835 - 5.4.2.2 4.518e-235 739.0
DYD3_k127_3732778_1 Methionine synthase K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002994 379.0
DYD3_k127_3732778_10 NMT1-like family - - - 0.000000000000000000000000000004243 132.0
DYD3_k127_3732778_11 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000003109 94.0
DYD3_k127_3732778_12 PFAM NMT1 THI5 like domain protein K02051 - - 0.0000000000232 75.0
DYD3_k127_3732778_13 Glyoxalase-like domain - - - 0.0000001138 59.0
DYD3_k127_3732778_2 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003849 296.0
DYD3_k127_3732778_3 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004509 278.0
DYD3_k127_3732778_4 ADP-glyceromanno-heptose 6-epimerase activity K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000001209 222.0
DYD3_k127_3732778_5 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.00000000000000000000000000000000000000000000000000000003072 209.0
DYD3_k127_3732778_6 Luciferase-like monooxygenase K15854 - 1.14.14.3 0.00000000000000000000000000000000000000000000003024 184.0
DYD3_k127_3732778_7 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000001498 178.0
DYD3_k127_3732778_8 cellulose binding - - - 0.00000000000000000000000000000000000000001396 168.0
DYD3_k127_3732778_9 Belongs to the ompA family K03640 - - 0.000000000000000000000000000000001183 138.0
DYD3_k127_3738544_0 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 461.0
DYD3_k127_3738544_1 COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components K15585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007581 350.0
DYD3_k127_3738544_2 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002656 320.0
DYD3_k127_3738544_3 alpha/beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000145 266.0
DYD3_k127_3740071_0 COG4096 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases K01153 - 3.1.21.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002027 517.0
DYD3_k127_3740071_1 Mechanosensitive ion channel K22044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003494 265.0
DYD3_k127_3740071_2 transporter - - - 0.000000000000000000000000000000000000000000000000000000661 211.0
DYD3_k127_3740071_3 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II - - - 0.00000009584 54.0
DYD3_k127_3740071_4 COG4096 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases K01153 - 3.1.21.3 0.00002259 49.0
DYD3_k127_3751647_0 Belongs to the HpcH HpaI aldolase family K01644 - 4.1.3.34 0.000000000000000000000000000000000000000000000000000001873 202.0
DYD3_k127_3751647_1 Bacterial extracellular solute-binding protein K02012 - - 0.000000000000000000000000000000000000008786 160.0
DYD3_k127_3751647_2 Aldehyde dehydrogenase family K22187 - - 0.000000000000000000000004287 107.0
DYD3_k127_3751647_3 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000004887 113.0
DYD3_k127_3773779_0 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001735 299.0
DYD3_k127_3773779_1 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.0000000000000000000000000000000000000000000000001205 187.0
DYD3_k127_3773779_2 Ribosomal protein L11 methyltransferase K02687 - - 0.000000000000000000000000000000000000000000206 169.0
DYD3_k127_3773779_3 RDD family - - - 0.00000000000004861 81.0
DYD3_k127_3786579_0 RNA polymerase I subunit A N-terminus K03046 - 2.7.7.6 0.0 2083.0
DYD3_k127_3786579_1 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 1.577e-290 900.0
DYD3_k127_3786579_2 With S4 and S5 plays an important role in translational accuracy K02950 - - 0.00000000000000000000000000000000000000000000000000000000000000008714 223.0
DYD3_k127_3786579_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000001825 212.0
DYD3_k127_3809135_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002022 526.0
DYD3_k127_3809135_1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 435.0
DYD3_k127_3809135_2 ornithine cyclodeaminase K01750 - 4.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001602 334.0
DYD3_k127_3809135_3 PFAM Peptidase M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000003714 250.0
DYD3_k127_3809135_4 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000004632 233.0
DYD3_k127_3809135_5 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000003799 219.0
DYD3_k127_3809135_6 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000003183 176.0
DYD3_k127_3809135_7 LysM domain - - - 0.0000000001357 72.0
DYD3_k127_3809135_8 thiamine-containing compound biosynthetic process K02051 - - 0.000003697 53.0
DYD3_k127_3809135_9 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K08234 - - 0.000003744 58.0
DYD3_k127_382348_0 Belongs to the UbiD family K03182 - 4.1.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003371 390.0
DYD3_k127_382348_1 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 - 4.1.1.32 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000312 340.0
DYD3_k127_382348_10 Universal stress protein family - - - 0.00001818 50.0
DYD3_k127_382348_2 PFAM Chlorite dismutase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008298 327.0
DYD3_k127_382348_3 PFAM Nitrile hydratase alpha K01721 - 4.2.1.84 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002196 277.0
DYD3_k127_382348_4 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004675 252.0
DYD3_k127_382348_5 Domain of unknown function (DUF4126) - - - 0.000000000000000000000000000000000000000000000000000000000001055 216.0
DYD3_k127_382348_6 Protein of unknown function (DUF502) - - - 0.00000000000000000000000000000000000005749 150.0
DYD3_k127_382348_7 Nitrile hydratase beta subunit K20807 - 4.2.1.84 0.0000000000000000000000000356 110.0
DYD3_k127_382348_8 Nitrile hydratase beta subunit K20807 - 4.2.1.84 0.000000000000000000000002616 105.0
DYD3_k127_382348_9 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000108 98.0
DYD3_k127_3867639_0 Histidine kinase-like ATPase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005485 346.0
DYD3_k127_3867639_1 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000816 154.0
DYD3_k127_3884249_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000019 596.0
DYD3_k127_3884249_1 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 - 1.2.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000443 518.0
DYD3_k127_3884249_10 Winged helix DNA-binding domain - - - 0.0000000000000000000000000000000000000000874 156.0
DYD3_k127_3884249_11 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000002916 141.0
DYD3_k127_3884249_12 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.00000000000000000000000000000003343 132.0
DYD3_k127_3884249_13 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.0000000000000000000000000000001374 126.0
DYD3_k127_3884249_14 Methyltransferase domain - - - 0.000000000001482 70.0
DYD3_k127_3884249_2 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005687 421.0
DYD3_k127_3884249_3 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 GO:0003674,GO:0003824,GO:0004349,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0018130,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000064 357.0
DYD3_k127_3884249_4 Binding-protein-dependent transport system inner membrane component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001919 259.0
DYD3_k127_3884249_5 PFAM LemA family protein K03744 - - 0.00000000000000000000000000000000000000000000000000000000000000000008506 237.0
DYD3_k127_3884249_6 Cytidylyltransferase-like K00969 GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.7.18 0.0000000000000000000000000000000000000000000000000000000002032 210.0
DYD3_k127_3884249_7 PFAM Phosphoribosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000001462 207.0
DYD3_k127_3884249_8 TPM domain K06872 - - 0.00000000000000000000000000000000000000000000002917 181.0
DYD3_k127_3884249_9 Membrane K08988 - - 0.00000000000000000000000000000000000000000009978 169.0
DYD3_k127_3886501_0 FeS assembly protein SufB K07033,K09014 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006790,GO:0008150,GO:0008152,GO:0009536,GO:0009842,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0031163,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044085,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0051186,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0071840 - 3.791e-212 664.0
DYD3_k127_3886501_1 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006223 463.0
DYD3_k127_3886501_2 transcriptional regulator, Rrf2 family - - - 0.0000000000000000000000000001005 120.0
DYD3_k127_3923403_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000524 582.0
DYD3_k127_3923403_1 COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM CutM homologs K00087,K03519 - 1.17.1.4,1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000002228 228.0
DYD3_k127_3923403_2 N-acetylphosphatidylethanolamine-hydrolysing phospholipas activity - - - 0.00000000000000000000000000000000000006882 153.0
DYD3_k127_3923403_3 carbon monoxide dehydrogenase K03518 - 1.2.5.3 0.00000000000000000001072 94.0
DYD3_k127_3923403_4 Hydantoin racemase K16841 - 5.1.99.3 0.0000000000001698 79.0
DYD3_k127_3936248_0 RecF/RecN/SMC N terminal domain K03631 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006294 398.0
DYD3_k127_3936248_1 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 GO:0000166,GO:0003674,GO:0003824,GO:0003951,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006741,GO:0006753,GO:0006766,GO:0006767,GO:0006769,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008976,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009820,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016776,GO:0017076,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000005781 258.0
DYD3_k127_3936248_2 COG3639 ABC-type phosphate phosphonate transport system, permease component - - - 0.00000000000000305 77.0
DYD3_k127_3936248_3 Tetratricopeptide repeat - - - 0.000000145 54.0
DYD3_k127_3941901_0 protein histidine kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001089 251.0
DYD3_k127_3941901_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000017 235.0
DYD3_k127_3941901_2 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01754 - 4.3.1.19 0.0000000000000000000000000000000000003639 144.0
DYD3_k127_3941901_3 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000002558 145.0
DYD3_k127_3941901_4 Histidine kinase - - - 0.00000000000000002564 83.0
DYD3_k127_3941901_5 PhoQ Sensor - - - 0.000000001831 66.0
DYD3_k127_3941901_6 Osmosensitive K channel His kinase sensor K07646 - 2.7.13.3 0.0002045 45.0
DYD3_k127_3945136_0 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006997 394.0
DYD3_k127_3945136_1 Deoxyhypusine synthase K00809 - 2.5.1.46 0.0000000000000000000000000000000000000002719 152.0
DYD3_k127_3945136_2 iron ion homeostasis K02012 - - 0.0000000000000000000000002556 119.0
DYD3_k127_3959753_0 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K01781 - 5.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000005776 236.0
DYD3_k127_3959753_1 MOSC domain - - - 0.0000000000000000000000000000000000000000000000000168 184.0
DYD3_k127_3959753_2 Cupin 2, conserved barrel domain protein - - - 0.000000000000001917 77.0
DYD3_k127_3959753_3 Cupin domain - - - 0.0000002899 57.0
DYD3_k127_3962778_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 7.276e-292 916.0
DYD3_k127_3962778_1 membrane protein (DUF2254) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000403 439.0
DYD3_k127_3962778_2 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04565 - 1.15.1.1 0.0000000000000000000000000000000000000000000003438 173.0
DYD3_k127_3962778_3 Protein involved in formate dehydrogenase formation K02380 - - 0.00000000000000000000000000000000000001099 148.0
DYD3_k127_3962778_4 RNA recognition motif - - - 0.000000000000000000000000000001792 124.0
DYD3_k127_3962778_5 - - - - 0.0000000000000000000000000005485 119.0
DYD3_k127_3962778_6 Proteolipid membrane potential modulator - - - 0.0000000000000000000000005387 104.0
DYD3_k127_3962778_7 Hsp20/alpha crystallin family - - - 0.000000000000000000384 92.0
DYD3_k127_3962928_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 7.845e-278 865.0
DYD3_k127_3962928_1 Transketolase, C-terminal domain K00162 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 514.0
DYD3_k127_3962928_10 Phosphopantetheine attachment site - - - 0.0000000000000000000005847 97.0
DYD3_k127_3962928_11 portal protein - - - 0.0000000000000007687 85.0
DYD3_k127_3962928_13 best DB hits BLAST gb AAD45539.1 K07480 - - 0.00001736 49.0
DYD3_k127_3962928_2 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003497 472.0
DYD3_k127_3962928_3 Catalytic domain of components of various dehydrogenase complexes K00627 - 2.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000135 430.0
DYD3_k127_3962928_4 Acts as a magnesium transporter K04767,K06213,K15986 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002012 369.0
DYD3_k127_3962928_5 Uncharacterized conserved protein (DUF2267) - - - 0.000000000000000000000000000000000000000000000000258 183.0
DYD3_k127_3962928_6 benzoyl-CoA oxygenase K15512 - 1.14.13.208 0.0000000000000000000000000000000000000000000002316 176.0
DYD3_k127_3962928_7 Mechanosensitive ion channel K03442 - - 0.0000000000000000000000000000000000008591 145.0
DYD3_k127_3962928_8 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000001955 151.0
DYD3_k127_3962928_9 PFAM UspA domain protein K06149 - - 0.0000000000000000000000003166 109.0
DYD3_k127_3972950_0 Conserved carboxylase domain K01571 - 4.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003485 374.0
DYD3_k127_3972950_1 Monooxygenase K14733 - 1.14.13.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000494 289.0
DYD3_k127_3972950_2 Belongs to the DegT DnrJ EryC1 family K13010 - 2.6.1.102 0.000000000000000000000000000000000002642 153.0
DYD3_k127_3972950_3 Belongs to the ompA family - - - 0.00000000006828 67.0
DYD3_k127_3972950_4 Chromosome partitioning protein ParA - - - 0.00000002548 62.0
DYD3_k127_3977821_0 PD-(D/E)XK nuclease superfamily - - - 2.723e-231 759.0
DYD3_k127_3977821_1 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002157 582.0
DYD3_k127_3977821_10 Ring hydroxylating alpha subunit (catalytic domain) K00479 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000218 429.0
DYD3_k127_3977821_11 AMP-binding enzyme C-terminal domain K00666,K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005779 358.0
DYD3_k127_3977821_12 Protocatechuate 3,4-dioxygenase beta subunit N terminal K00449 - 1.13.11.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006708 322.0
DYD3_k127_3977821_13 Amidinotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004863 322.0
DYD3_k127_3977821_14 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009009 306.0
DYD3_k127_3977821_15 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002018 284.0
DYD3_k127_3977821_16 Ndr family K01055,K14727 - 3.1.1.24,4.1.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008901 274.0
DYD3_k127_3977821_17 protocatechuate 3,4-dioxygenase activity K00448 - 1.13.11.3 0.000000000000000000000000000000000000000000000000000000000000006038 222.0
DYD3_k127_3977821_18 CPA2 family - - - 0.0000000000000000000000000000000000000000000000000000000000008035 222.0
DYD3_k127_3977821_19 Uncharacterized protein conserved in bacteria (DUF2236) - - - 0.0000000000000000000000000000000000000000000000000002311 196.0
DYD3_k127_3977821_20 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000004924 194.0
DYD3_k127_3977821_21 Protein of unknown function, DUF488 - - - 0.000000000000000000000000000000000000000000000000009973 186.0
DYD3_k127_3977821_22 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000005847 170.0
DYD3_k127_3977821_23 His Kinase A (phosphoacceptor) domain K20971 - - 0.000000000000000000000000000000000000000000002899 185.0
DYD3_k127_3977821_24 peroxiredoxin activity K01055,K01607,K14727 - 3.1.1.24,4.1.1.44 0.000000000000000000000000000000000000000005879 157.0
DYD3_k127_3977821_25 COG0477 Permeases of the major facilitator superfamily K05820 - - 0.000000000000000000000000000000000003968 152.0
DYD3_k127_3977821_26 DsbA oxidoreductase - - - 0.000000000000000000000000000000000006184 143.0
DYD3_k127_3977821_27 Transporter - - - 0.00000000000000000000000000002772 128.0
DYD3_k127_3977821_28 Bacterial protein of unknown function (DUF883) - - - 0.000000000000000000000000173 110.0
DYD3_k127_3977821_29 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.000000000000000000000009317 108.0
DYD3_k127_3977821_3 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 572.0
DYD3_k127_3977821_30 NMT1-like family K02051 - - 0.000000000000000000007831 104.0
DYD3_k127_3977821_31 Isochorismatase family - - - 0.000000000000000001585 92.0
DYD3_k127_3977821_32 Cupin domain - - - 0.00000000000000304 80.0
DYD3_k127_3977821_33 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.000000001387 65.0
DYD3_k127_3977821_34 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000003999 68.0
DYD3_k127_3977821_4 exonuclease activity K16899 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005096 553.0
DYD3_k127_3977821_5 ethanolamine utilization protein K04019 GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0019538,GO:0030091,GO:0043085,GO:0043170,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0050790,GO:0051339,GO:0051349,GO:0065007,GO:0065009,GO:0071704,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003384 496.0
DYD3_k127_3977821_6 PFAM LOR SDH bifunctional - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002035 469.0
DYD3_k127_3977821_7 Gamma-glutamyltranspeptidase K00681 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0006082,GO:0006508,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008242,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016787,GO:0019538,GO:0019752,GO:0030288,GO:0030313,GO:0031975,GO:0034722,GO:0036374,GO:0042597,GO:0043094,GO:0043102,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0070011,GO:0071704,GO:0097264,GO:0140096,GO:1901564,GO:1901566,GO:1901576 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005909 475.0
DYD3_k127_3977821_8 Aminotransferase class-V - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 439.0
DYD3_k127_3977821_9 Adenylosuccinate lyase C-terminus K01756,K01857 - 4.3.2.2,5.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002486 435.0
DYD3_k127_3996883_0 Tripartite tricarboxylate transporter TctA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004156 470.0
DYD3_k127_3996883_1 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000005454 188.0
DYD3_k127_3996883_2 Tripartite tricarboxylate transporter TctA family - - - 0.000000000000000000000000002501 121.0
DYD3_k127_3999787_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 5.95e-219 694.0
DYD3_k127_3999787_1 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000213 349.0
DYD3_k127_3999787_2 TIM-barrel fold metal-dependent hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 343.0
DYD3_k127_3999787_3 Protein of unknown function (DUF664) - - - 0.0000000000000000000000000000000000002669 147.0
DYD3_k127_3999787_4 Bacterial extracellular solute-binding protein - - - 0.0000000000000000000000000000000003001 140.0
DYD3_k127_3999787_5 gluconolactonase activity K01053 - 3.1.1.17 0.0000000000000000000001546 103.0
DYD3_k127_3999787_6 ABC-type Fe3 transport system, periplasmic component K02012 - - 0.00000000000000002685 94.0
DYD3_k127_400181_0 Rieske [2Fe-2S] domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003631 349.0
DYD3_k127_400181_1 thiamine-containing compound biosynthetic process K02051 - - 0.000000000000000000000000002194 121.0
DYD3_k127_400181_2 Catalyzes the oxidation of methyl-H(4)MPT to methylene- H(4)MPT K00320 - 1.5.98.2 0.000000000000000000000000582 117.0
DYD3_k127_400181_3 peptidoglycan-binding domain-containing protein - - - 0.000000000000002547 86.0
DYD3_k127_400181_4 YCII-related domain K09780 - - 0.000000000002644 72.0
DYD3_k127_400181_5 ABC transporter, phosphonate, periplasmic substrate-binding protein K02051 - - 0.00000001812 65.0
DYD3_k127_400181_6 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K02051 - - 0.0000003834 62.0
DYD3_k127_400181_7 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K01761 - 4.4.1.11 0.000001582 49.0
DYD3_k127_400181_8 Cysteine dioxygenase type I - - - 0.000002665 57.0
DYD3_k127_400181_9 Belongs to the ompA family - - - 0.00007279 50.0
DYD3_k127_4018235_0 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001942 289.0
DYD3_k127_4018235_1 Mycolic acid cyclopropane synthetase K05928 - 2.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000004835 269.0
DYD3_k127_4018235_2 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000002892 237.0
DYD3_k127_4018235_3 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K16843 - 1.1.1.310 0.0000000000000000000000000000000000000000000000000000009854 204.0
DYD3_k127_4018235_4 major facilitator superfamily - - - 0.000000000000000000000000000000000000163 156.0
DYD3_k127_4018235_5 major facilitator superfamily - - - 0.000000000000000000000000000000000108 148.0
DYD3_k127_4018235_6 metal-dependent hydrolase of the TIM-barrel fold K07045 - - 0.0000000000000000000000006023 117.0
DYD3_k127_4018235_7 thiamine-containing compound biosynthetic process K02051 - - 0.000000000000000314 90.0
DYD3_k127_4018235_8 PhoPQ-activated pathogenicity-related protein - - - 0.0000000001824 64.0
DYD3_k127_4030039_0 Thiamine pyrophosphate enzyme, central domain - - - 9.998e-241 756.0
DYD3_k127_4030039_1 Thiamine pyrophosphate enzyme, central domain - - - 6.898e-209 661.0
DYD3_k127_4030039_2 SMART Elongator protein 3 MiaB NifB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003489 514.0
DYD3_k127_4049132_0 F420-0:Gamma-glutamyl ligase K12234 - 6.3.2.31,6.3.2.34 0.000000000000000000000000000000000000000000000000000000000000000004226 234.0
DYD3_k127_4049132_1 TIGRFAM LPPG domain protein containing protein K11212 - 2.7.8.28 0.00000000000000000000000000000000000000000000000000000000006433 211.0
DYD3_k127_4049132_2 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.000000000000000000000000000000000000000002318 163.0
DYD3_k127_4049132_3 Guanylyltransferase that catalyzes the activation of 2- phospho-L-lactate (LP) as (2S)-lactyl-2-diphospho-5'-guanosine (LPPG), via the condensation of LP with GTP. Is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor K14941 - 2.7.7.68 0.000000000000000000000009068 111.0
DYD3_k127_4049132_4 Protein of unknown function (DUF3568) - - - 0.0000000002232 65.0
DYD3_k127_405601_0 DNA photolyase activity K03716 - 4.1.99.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007953 343.0
DYD3_k127_405601_1 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008836 306.0
DYD3_k127_405601_2 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004861 300.0
DYD3_k127_405601_3 Transglycosylase SLT domain K06381,K08309 - - 0.00000000000000000000000000000000000000000000000000000002112 220.0
DYD3_k127_405601_4 Peptidase C26 K07010 - - 0.000000000000000000000000000000000000000000000000000002455 199.0
DYD3_k127_405601_5 peptidase - - - 0.000000000000000000000000000000000000000000000000001087 198.0
DYD3_k127_405601_6 GAF domain - - - 0.0000000000000000000000000000000000000000000000004241 199.0
DYD3_k127_405601_7 PFAM carbon monoxide dehydrogenase subunit G K09386 - - 0.000000000000000000000000000000000002006 143.0
DYD3_k127_405601_8 histidine kinase dimerisation and phosphoacceptor region - - - 0.0000000000784 73.0
DYD3_k127_405601_9 ParB domain protein nuclease K03497 - - 0.00000007624 63.0
DYD3_k127_4093611_0 4Fe-4S dicluster domain K00184 - - 0.0 1136.0
DYD3_k127_4093611_1 ATPases associated with a variety of cellular activities K02003,K05685 - - 1.373e-256 810.0
DYD3_k127_4093611_10 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source - - - 0.000000000000000000000000000000000000000003437 162.0
DYD3_k127_4093611_11 ABC-type nitrate sulfonate bicarbonate transport K02051 - - 0.0000000000001756 83.0
DYD3_k127_4093611_12 - - - - 0.00000000000476 72.0
DYD3_k127_4093611_13 signal sequence binding K07152 - - 0.000000000005317 68.0
DYD3_k127_4093611_14 Heavy-metal resistance - - - 0.000003158 55.0
DYD3_k127_4093611_2 Polysulphide reductase, NrfD K00185 - - 7.227e-224 701.0
DYD3_k127_4093611_3 ABC-type Zn2 transport system, periplasmic component surface adhesin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009478 441.0
DYD3_k127_4093611_4 COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL CutL homologs - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002344 408.0
DYD3_k127_4093611_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K13888 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007711 358.0
DYD3_k127_4093611_6 Cytochrome c7 and related cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007788 306.0
DYD3_k127_4093611_7 Protein of unknown function (DUF3341) - - - 0.000000000000000000000000000000000000000000000000000000000000000000006618 239.0
DYD3_k127_4093611_8 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000000000000000000000000000002952 230.0
DYD3_k127_4093611_9 ECF sigma factor - - - 0.00000000000000000000000000000000000000000000000004379 185.0
DYD3_k127_4107129_0 Alpha-amylase domain K05343 - 3.2.1.1,5.4.99.16 2.565e-233 729.0
DYD3_k127_4107129_1 Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003121 305.0
DYD3_k127_4107129_2 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000002629 235.0
DYD3_k127_4107129_3 Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.00000000000000000000000006705 113.0
DYD3_k127_4107129_4 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant - - - 0.000000000000000003708 88.0
DYD3_k127_4161484_0 Glucoamylase and related glycosyl hydrolases - - - 3.187e-198 624.0
DYD3_k127_4161484_1 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007679 532.0
DYD3_k127_4161484_2 nuclear-transcribed mRNA catabolic process, no-go decay - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006733 522.0
DYD3_k127_4161484_3 Cytokinin riboside 5'-monophosphate phosphoribohydrolase K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000002788 169.0
DYD3_k127_4161484_4 Lipid A 3-O-deacylase (PagL) - - - 0.00000000000000000049 95.0
DYD3_k127_4166741_0 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000007241 242.0
DYD3_k127_4166741_1 MOFRL family K11529 - 2.7.1.165 0.00000000000000000000000000000000000000000000000000000000000004346 220.0
DYD3_k127_4166741_2 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0032535,GO:0042592,GO:0044425,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0090066 - 0.000000000000000000000000000000000000000000000000000003041 195.0
DYD3_k127_4166741_3 Protein conserved in bacteria - - - 0.0000000000000000000000000000000008968 151.0
DYD3_k127_4166741_4 Cupredoxin-like domain - - - 0.000000000000000000000000002179 122.0
DYD3_k127_4203115_0 Belongs to the thiolase family K00626,K02615 - 2.3.1.174,2.3.1.223,2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 534.0
DYD3_k127_4203115_1 Dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002949 317.0
DYD3_k127_4203115_2 Belongs to the enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004663 286.0
DYD3_k127_4203115_3 Belongs to the enoyl-CoA hydratase isomerase family K15866 - 5.3.3.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009377 282.0
DYD3_k127_4203115_4 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000001256 222.0
DYD3_k127_4203115_5 Protein involved in outer membrane biogenesis K07289 - - 0.00000000001396 76.0
DYD3_k127_4208134_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K00087 - 1.17.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000001164 281.0
DYD3_k127_4208134_1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.0000000000000000001319 95.0
DYD3_k127_4208134_2 NMT1-like family - - - 0.000000000000000005705 94.0
DYD3_k127_4231755_0 Hydantoinase B/oxoprolinase K01474 - 3.5.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001955 568.0
DYD3_k127_4231755_1 5-oxoprolinase K01473 - 3.5.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000717 376.0
DYD3_k127_4231755_2 Cupin 2, conserved barrel domain protein K00450,K11948 - 1.13.11.38,1.13.11.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005325 273.0
DYD3_k127_4231755_3 FAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001855 262.0
DYD3_k127_4231755_4 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000006143 128.0
DYD3_k127_4231755_5 thiamine-containing compound biosynthetic process K02051 - - 0.0000000000000006987 89.0
DYD3_k127_4256060_0 Binding-protein-dependent transport system inner membrane component K02011 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003012 473.0
DYD3_k127_4256060_1 Bacterial extracellular solute-binding protein K02012 - - 0.00000000000000000000000000000000000000000000000001421 193.0
DYD3_k127_4256060_2 Glycosyl hydrolase family 65, C-terminal domain K01087,K01194 GO:0003674,GO:0003824,GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0016787,GO:0030312,GO:0044464,GO:0071944 3.1.3.12,3.2.1.28 0.00000000000000000000000000000000000008454 153.0
DYD3_k127_4256060_3 Belongs to the ompA family K03640 - - 0.00000000000000000000000000000001476 134.0
DYD3_k127_4267940_0 proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 584.0
DYD3_k127_4267940_1 NADH ubiquinone oxidoreductase subunit 5 (Chain L) multisubunit Na H antiporter, MnhA subunit K00341 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002235 558.0
DYD3_k127_4267940_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004928 439.0
DYD3_k127_4267940_3 formate dehydrogenase (NAD+) activity K00336 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005165 442.0
DYD3_k127_4267940_4 quinone binding K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003411 368.0
DYD3_k127_4267940_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0030964,GO:0032991,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:0098797,GO:0098803,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1990204 1.6.5.3 0.000000000000000000000000000002928 123.0
DYD3_k127_4267940_6 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.00000000000000000000003226 105.0
DYD3_k127_4267940_7 Phosphodiester glycosidase - - - 0.000000006735 63.0
DYD3_k127_4306504_0 6-phosphogluconate dehydrogenase, C-terminal domain K00033 - 1.1.1.343,1.1.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000196 414.0
DYD3_k127_4306504_1 Phosphoglucose isomerase K00616,K13810 - 2.2.1.2,5.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003122 299.0
DYD3_k127_4314054_0 FAD dependent oxidoreductase K13796 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003694 409.0
DYD3_k127_4314054_1 Protein conserved in bacteria - - - 0.000000000000000000002851 102.0
DYD3_k127_4315334_0 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004126 430.0
DYD3_k127_4315334_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006986 344.0
DYD3_k127_4315334_2 Phosphoenolpyruvate phosphomutase - - - 0.00000000000000000000000000000000000000000000000000000000146 212.0
DYD3_k127_4315334_4 Beta-lactamase superfamily domain - - - 0.0000102 49.0
DYD3_k127_4325674_0 Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis K03182 - 4.1.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005806 567.0
DYD3_k127_4325674_1 ATPases associated with a variety of cellular activities K02049 - - 0.00000000000000000000000000000000000000000000000000000000000008509 221.0
DYD3_k127_4325674_2 ABC transporter substrate-binding protein K15553 - - 0.00002561 56.0
DYD3_k127_43409_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 2.704e-277 896.0
DYD3_k127_43409_1 Permeases of the major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000001719 216.0
DYD3_k127_43409_2 TIR domain - - - 0.0000000000000000000000000000000000000000000000004676 190.0
DYD3_k127_43409_3 FAD binding domain K07077 - - 0.000000000000000000000000000000000000002369 164.0
DYD3_k127_43409_4 SurA N-terminal domain K03771 - 5.2.1.8 0.00000000000000000000000000000000000004471 158.0
DYD3_k127_43409_5 Domain of unknown function (DUF309) K09763 - - 0.00000000006735 67.0
DYD3_k127_4361256_0 CHAT domain - - - 0.0 1724.0
DYD3_k127_4361256_1 Uncharacterized alpha/beta hydrolase domain (DUF2235) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 437.0
DYD3_k127_4361256_2 aldo-keto reductase (NADP) activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008338 407.0
DYD3_k127_4361256_3 Belongs to the peptidase S51 family K05995 GO:0003674,GO:0003824,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0071704,GO:0140096,GO:1901564 3.4.13.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000001539 270.0
DYD3_k127_4361256_4 epimerase K02377 - 1.1.1.271 0.00000000000000000000000000000000000000000000000000000000002687 213.0
DYD3_k127_4361256_5 IMP dehydrogenase activity K04767 - - 0.000000000000000000000000059 113.0
DYD3_k127_4362299_0 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 324.0
DYD3_k127_4362299_1 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000003738 124.0
DYD3_k127_4362299_2 NMT1-like family K02051 - - 0.0000000000000000007718 98.0
DYD3_k127_4362299_3 ABC transporter substrate-binding protein K02051 - - 0.0000001164 63.0
DYD3_k127_4362299_4 Iron-containing redox enzyme K06137 - 1.3.3.11 0.000207 52.0
DYD3_k127_4421558_0 PFAM Bacterial extracellular solute-binding proteins, family 5 Middle K02035,K13893 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001666 454.0
DYD3_k127_4421558_1 PFAM Binding-protein-dependent transport system inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002653 334.0
DYD3_k127_4421558_2 PFAM Binding-protein-dependent transport system inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003689 301.0
DYD3_k127_4421558_3 alpha/beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005071 273.0
DYD3_k127_4421558_4 Belongs to the UPF0255 family K11750 GO:0003674,GO:0003824,GO:0005575,GO:0006109,GO:0006629,GO:0008150,GO:0008152,GO:0009894,GO:0016020,GO:0016298,GO:0016787,GO:0016788,GO:0019222,GO:0043470,GO:0044238,GO:0050789,GO:0065007,GO:0071704,GO:0080090 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004351 275.0
DYD3_k127_4421558_5 KR domain K03366 - 1.1.1.304,1.1.1.76 0.000000000000000000000000000000000000000000000000000000000001174 217.0
DYD3_k127_4421558_6 carboxymuconolactone decarboxylase - - - 0.0000000000000000000000000000000000000001373 157.0
DYD3_k127_4421558_7 repeat-containing protein - - - 0.000000000000000002043 87.0
DYD3_k127_4421558_8 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.0000000000000494 82.0
DYD3_k127_4430608_0 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006351 424.0
DYD3_k127_4430608_1 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005586 368.0
DYD3_k127_4430608_2 Belongs to the UPF0255 family K11750 GO:0003674,GO:0003824,GO:0005575,GO:0006109,GO:0006629,GO:0008150,GO:0008152,GO:0009894,GO:0016020,GO:0016298,GO:0016787,GO:0016788,GO:0019222,GO:0043470,GO:0044238,GO:0050789,GO:0065007,GO:0071704,GO:0080090 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009163 323.0
DYD3_k127_4430608_3 PFAM Extradiol ring-cleavage dioxygenase class III protein subunit B K04101,K05713 - 1.13.11.16,1.13.11.8 0.00000000000000000000000000000000000000000000000000000000005489 214.0
DYD3_k127_4430608_4 Is also involved in protein lipoylation via its role as an octanoyl lipoyl carrier protein intermediate K02437 GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 - 0.0000000000000000000001641 101.0
DYD3_k127_4430608_5 Aromatic-ring-opening dioxygenase LigAB, LigA subunit - - - 0.0000000000000821 74.0
DYD3_k127_4430608_6 Luciferase-like monooxygenase K00320 - 1.5.98.2 0.0000000000002736 74.0
DYD3_k127_4431572_0 Isocitrate/isopropylmalate dehydrogenase K00030 - 1.1.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002695 285.0
DYD3_k127_4431572_1 proline dipeptidase activity K01262 - 3.4.11.9 0.00000000000000000000000000001213 123.0
DYD3_k127_4431572_2 EamA-like transporter family - - - 0.00000000000001112 84.0
DYD3_k127_4432553_0 Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) K01823 - 5.3.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004541 360.0
DYD3_k127_4432553_1 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 2.5.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000243 250.0
DYD3_k127_4432553_2 XanTHIne and CO dehydrogenases maturation factor, XdhC CoxF family K07402 - - 0.00000000000000000000000000000000000000000000007944 180.0
DYD3_k127_4432553_3 Pyridoxamine 5'-phosphate oxidase K09979 - - 0.00000000000000000000000000000000000002767 149.0
DYD3_k127_4432553_4 Domain of unknown function DUF120 K01091 - 3.1.3.18 0.00000000000000000004338 96.0
DYD3_k127_4432553_5 - - - - 0.0000000000000003392 84.0
DYD3_k127_4432553_6 molybdopterin cofactor binding K07402 - - 0.00006612 46.0
DYD3_k127_4463455_0 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003027 466.0
DYD3_k127_4463455_1 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 445.0
DYD3_k127_4463455_10 Protein of unknown function (DUF1152) - - - 0.000000000000000000000000000000000000000000000000000000000000000000006308 246.0
DYD3_k127_4463455_11 Major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000005301 224.0
DYD3_k127_4463455_12 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000003903 168.0
DYD3_k127_4463455_13 - - - - 0.000000000000000000000000000000000001016 145.0
DYD3_k127_4463455_14 Ndr family K01055 - 3.1.1.24 0.00000000000000000000000003872 118.0
DYD3_k127_4463455_15 Dihydrodipicolinate synthetase family K01714 - 4.3.3.7 0.0000000000000000000000001539 119.0
DYD3_k127_4463455_16 PFAM Universal stress protein family K06149 - - 0.000000000000000002314 90.0
DYD3_k127_4463455_2 Transmembrane secretion effector - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006307 419.0
DYD3_k127_4463455_3 PFAM Rhodanese domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008685 398.0
DYD3_k127_4463455_4 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003713 320.0
DYD3_k127_4463455_5 Inhibitor of apoptosis-promoting Bax1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002998 307.0
DYD3_k127_4463455_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002123 284.0
DYD3_k127_4463455_7 lactoylglutathione lyase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005847 256.0
DYD3_k127_4463455_8 Isochorismatase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003045 253.0
DYD3_k127_4463455_9 TIM-barrel fold metal-dependent hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002372 254.0
DYD3_k127_446647_0 Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs) K03669 GO:0005575,GO:0016020 - 7.54e-200 647.0
DYD3_k127_446647_1 PFAM toluene tolerance family protein K07323 - - 0.00000001561 61.0
DYD3_k127_4469814_0 Pfam SNARE associated Golgi protein - - - 6.633e-215 688.0
DYD3_k127_4469814_1 Endonuclease Exonuclease Phosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003257 270.0
DYD3_k127_4469814_2 COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily - - - 0.0000000000000000000000000000000003638 137.0
DYD3_k127_454475_0 Hexapeptide repeat of succinyl-transferase K13018 - 2.3.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003276 599.0
DYD3_k127_454475_1 Domain of unknown function (DUF4910) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003242 576.0
DYD3_k127_454475_10 Putative zinc binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001725 347.0
DYD3_k127_454475_11 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001872 301.0
DYD3_k127_454475_12 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007059 296.0
DYD3_k127_454475_13 methyltransferase K15471 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0009273,GO:0009987,GO:0016020,GO:0016043,GO:0016740,GO:0016741,GO:0022607,GO:0032259,GO:0042546,GO:0044085,GO:0044464,GO:0071554,GO:0071766,GO:0071770,GO:0071840,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001306 263.0
DYD3_k127_454475_14 undecaprenyl-phosphate glucose phosphotransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000005044 240.0
DYD3_k127_454475_15 NmrA-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000001225 240.0
DYD3_k127_454475_16 SIS domain K03271 - 5.3.1.28 0.000000000000000000000000000000000000000000000000000000000000007593 222.0
DYD3_k127_454475_17 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 - 5.1.3.13 0.00000000000000000000000000000000000000000000000000000000002632 209.0
DYD3_k127_454475_18 polysaccharide deacetylase K22278 - 3.5.1.104 0.0000000000000000000000000000000000000000000000000000000008754 211.0
DYD3_k127_454475_19 PFAM Short-chain dehydrogenase reductase SDR - - - 0.00000000000000000000000000000000000000000000000000000000366 208.0
DYD3_k127_454475_2 Polysaccharide biosynthesis protein K01710,K15894,K15912,K19421 GO:0008150,GO:0043900,GO:0043902,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0065007,GO:1900190,GO:1900192 4.2.1.115,4.2.1.135,4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002491 542.0
DYD3_k127_454475_20 - - - - 0.000000000000000000000000000000000000000000000000000001489 204.0
DYD3_k127_454475_21 glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity K00134,K00150,K03340 - 1.2.1.12,1.2.1.59,1.4.1.16 0.000000000000000000000000000000000000000000000000000001686 197.0
DYD3_k127_454475_22 Nodulation protein S (NodS) - - - 0.00000000000000000000000000000000000000000001287 172.0
DYD3_k127_454475_23 ADP-glyceromanno-heptose 6-epimerase activity - - - 0.0000000000000000000000000000000000000004069 165.0
DYD3_k127_454475_3 HAD-hyrolase-like K03273 - 3.1.3.82,3.1.3.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006001 520.0
DYD3_k127_454475_4 Belongs to the DegT DnrJ EryC1 family K13010 - 2.6.1.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005071 518.0
DYD3_k127_454475_5 PFAM ABC transporter related K09691 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003956 511.0
DYD3_k127_454475_6 GDP-mannose 4,6 dehydratase K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007599 460.0
DYD3_k127_454475_7 GHMP kinases C terminal K07031 - 2.7.1.168 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002666 447.0
DYD3_k127_454475_8 Belongs to the DegT DnrJ EryC1 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 448.0
DYD3_k127_454475_9 COG1682 ABC-type polysaccharide polyol phosphate export systems, permease component K09690 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 381.0
DYD3_k127_4553271_0 Belongs to the peptidase S16 family - - - 4.577e-227 728.0
DYD3_k127_4553271_1 von Willebrand factor, type A K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002935 463.0
DYD3_k127_4553271_2 Acyl-CoA dehydrogenase, C-terminal domain K16173 - 1.3.99.32 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001467 311.0
DYD3_k127_4553271_3 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000002119 213.0
DYD3_k127_4553271_4 PFAM peptidase - - - 0.0000000000000000000000000000000000000000000000000000002181 213.0
DYD3_k127_4553271_5 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000001924 192.0
DYD3_k127_4553271_6 von Willebrand factor (vWF) type A domain - - - 0.000000000000000000000000000000000000000001557 158.0
DYD3_k127_4553271_7 Class II Aldolase and Adducin N-terminal domain K01628 - 4.1.2.17 0.000000000000000000000000000000000000004139 155.0
DYD3_k127_4553271_8 Oxidoreductase, short chain dehydrogenase reductase family protein K00059 - 1.1.1.100 0.0005003 45.0
DYD3_k127_4566566_0 MmgE/PrpD family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008225 446.0
DYD3_k127_4566566_1 Protein of unknown function (DUF3500) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003174 412.0
DYD3_k127_4566566_2 PFAM Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000595 361.0
DYD3_k127_4566566_3 protein related to plant photosystem II stability assembly factor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000165 270.0
DYD3_k127_4566566_4 PFAM Alcohol dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000001599 236.0
DYD3_k127_4566566_5 Rieske [2Fe-2S] domain K15060 - - 0.000000000000000000000000000000000000000000000000000000000000005537 233.0
DYD3_k127_4566566_6 protein related to plant photosystem II stability assembly factor - - - 0.000000000000000000000003593 115.0
DYD3_k127_4566566_7 Involved in the degradation of phospho-AI-2, thereby terminating induction of the lsr operon and closing the AI-2 signaling cycle. Catalyzes the conversion of (4S)-4-hydroxy-5- phosphonooxypentane-2,3-dione (P-DPD) to 3-hydroxy-5- phosphonooxypentane-2,4-dione (P-HPD) K11530 GO:0002952,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0016491,GO:0016853,GO:0044424,GO:0044444,GO:0044464,GO:0055114 5.3.1.32 0.000000000000001323 80.0
DYD3_k127_4566566_8 Isochorismatase family - - - 0.000000003347 62.0
DYD3_k127_4566566_9 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00335,K18331 - 1.12.1.3,1.6.5.3 0.00000006674 57.0
DYD3_k127_4600560_0 TIGRFAM DNA binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000447 257.0
DYD3_k127_4600560_1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K16874 - - 0.00000000000000000000444 98.0
DYD3_k127_4635165_0 Animal haem peroxidase - - - 1.205e-253 801.0
DYD3_k127_4635165_1 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.000000000000000000001774 105.0
DYD3_k127_4636406_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 3.175e-274 861.0
DYD3_k127_4636406_1 Belongs to the UbiD family K03182 - 4.1.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005738 520.0
DYD3_k127_4636406_2 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.000000000000000000000000000000000000000000000000000001306 199.0
DYD3_k127_4636406_3 tigr00255 - - - 0.0000000000000000000000000000000000000000000000001177 187.0
DYD3_k127_4636406_4 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272,K21345 - 2.7.1.167,2.7.7.70 0.000000000000000000000000000000000000000000000003895 177.0
DYD3_k127_4636406_5 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.00000000000000002025 83.0
DYD3_k127_4636406_6 Peptidase s1 and s6 chymotrypsin hap K08372 - - 0.000006097 50.0
DYD3_k127_464140_0 Major Facilitator Superfamily K08224 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007066 430.0
DYD3_k127_464140_1 Protein of unknown function (DUF3500) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 396.0
DYD3_k127_4642395_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K00087 - 1.17.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007429 426.0
DYD3_k127_4642395_1 protein related to plant photosystem II stability assembly factor - - - 0.000000000000001577 83.0
DYD3_k127_4642395_2 Methionine synthase K00549 - 2.1.1.14 0.0000005215 51.0
DYD3_k127_464816_0 ABC-type Fe3 transport system permease component K02011 - - 0.000000000000000000000000000000000000000000000000000007221 202.0
DYD3_k127_464816_1 PFAM ABC transporter K02010,K02017,K02062,K10112,K10199,K17314 - 3.6.3.29,3.6.3.30 0.0000000000000000000000000000000000000000003343 162.0
DYD3_k127_4651315_0 Belongs to the amidase family K01426,K02433 - 3.5.1.4,6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005078 534.0
DYD3_k127_4651315_1 Catalyzes the oxidative ring opening of 3- hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate K00452 - 1.13.11.6 0.00000000000000000000000000000000000000000000006556 176.0
DYD3_k127_4651315_3 Pyridoxamine 5'-phosphate oxidase K07006 - - 0.0000000000000000000000000000001614 130.0
DYD3_k127_4651315_4 NUDIX domain - - - 0.0000000000000000000000001447 112.0
DYD3_k127_4657793_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 2.807e-199 646.0
DYD3_k127_4657793_1 Decarboxylase involved in the decarboxylation and detoxification of phenolic derivatives under both aerobic and anaerobic conditions. It is able to catalyze the reversible decarboxylation of 4-hydroxybenzoate and vanillate K01612,K16874 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0016829,GO:0016830,GO:0016831,GO:0044424,GO:0044464 4.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003258 341.0
DYD3_k127_4657793_2 Belongs to the UbiD family K16874 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003195 337.0
DYD3_k127_4657793_3 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008856 265.0
DYD3_k127_4657793_4 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM CutM-like protein K03519 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000258 220.0
DYD3_k127_4657793_5 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000001982 181.0
DYD3_k127_4658775_0 Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002533 276.0
DYD3_k127_4658775_1 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000002349 104.0
DYD3_k127_4658775_2 NMT1-like family - - - 0.000000000000002646 87.0
DYD3_k127_468764_0 NAD(P)-binding Rossmann-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001831 619.0
DYD3_k127_468764_1 L-carnitine dehydratase bile acid-inducible protein F - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001157 282.0
DYD3_k127_468764_10 Amidohydrolase K07045 - - 0.0000000002806 71.0
DYD3_k127_468764_11 Serine aminopeptidase, S33 - - - 0.000000002311 68.0
DYD3_k127_468764_12 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.000001412 49.0
DYD3_k127_468764_2 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000006579 223.0
DYD3_k127_468764_3 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000003777 217.0
DYD3_k127_468764_4 Acyl-CoA dehydrogenase, N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000009417 202.0
DYD3_k127_468764_5 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000005191 186.0
DYD3_k127_468764_6 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000007948 181.0
DYD3_k127_468764_7 - - - - 0.000000000000000000000000000000000000000000002743 167.0
DYD3_k127_468764_8 Bacterial extracellular solute-binding protein K02012 - - 0.000000000000000000000000000000000000004247 160.0
DYD3_k127_468764_9 - - - - 0.0000000000000000000000000000000000007801 144.0
DYD3_k127_4688877_0 LVIVD repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 350.0
DYD3_k127_4688877_1 Binding-protein-dependent transport system inner membrane component K02011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005654 356.0
DYD3_k127_4688877_2 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02010 - 3.6.3.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 333.0
DYD3_k127_4688877_3 COG0604 NADPH quinone reductase and related Zn-dependent K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003286 311.0
DYD3_k127_4688877_4 Succinyl-CoA ligase like flavodoxin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007613 271.0
DYD3_k127_4688877_5 thiamine-containing compound biosynthetic process K02051 - - 0.000000000000000000000000000000000000000002371 168.0
DYD3_k127_4688877_6 Bacterial extracellular solute-binding protein K02012 - - 0.00000000000000000000000000001162 131.0
DYD3_k127_4688877_7 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components - - - 0.00000000000000000003188 102.0
DYD3_k127_4703798_0 3-octaprenyl-4-hydroxybenzoate carboxy-lyase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008438 435.0
DYD3_k127_4703798_1 PFAM 6-phosphogluconate dehydrogenase NAD-binding K00020 - 1.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001573 385.0
DYD3_k127_4703798_2 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002937 391.0
DYD3_k127_4703798_3 response to heat K07090 - - 0.000002702 50.0
DYD3_k127_4730165_0 pyruvate dehydrogenase (acetyl-transferring) activity K00163 - 1.2.4.1 0.0 1165.0
DYD3_k127_4730165_1 Ion channel - - - 6.425e-203 646.0
DYD3_k127_4730165_10 rRNA (guanine-N2-)-methyltransferase activity K09846,K13604,K21460 GO:0003674,GO:0003824,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0009058,GO:0009987,GO:0015994,GO:0015995,GO:0016740,GO:0016741,GO:0018130,GO:0019438,GO:0030493,GO:0030494,GO:0032259,GO:0033013,GO:0033014,GO:0034641,GO:0036067,GO:0036069,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.210,2.1.1.304,2.1.1.333 0.0000000000000000000000000000000000000000000000000000003229 206.0
DYD3_k127_4730165_11 PFAM Biotin lipoate A B protein ligase K03800 - 6.3.1.20 0.000000000000000000000000000000000000000000000000001358 191.0
DYD3_k127_4730165_12 DNA polymerase A domain K02335 - 2.7.7.7 0.00000000000000000000000000000000000000001357 160.0
DYD3_k127_4730165_13 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.000000000000000000000000001638 115.0
DYD3_k127_4730165_15 2Fe-2S -binding domain - - - 0.000000006422 61.0
DYD3_k127_4730165_16 Serine aminopeptidase, S33 K05714 - 3.7.1.14 0.00003865 49.0
DYD3_k127_4730165_2 COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3) K00382 - 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004659 508.0
DYD3_k127_4730165_3 Methyl-transferase K18912 - 1.14.99.50 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006141 494.0
DYD3_k127_4730165_4 Peptidase family M28 K01258 - 3.4.11.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 349.0
DYD3_k127_4730165_5 Component of pyruvate dehydrogenase complex K00627 - 2.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001282 338.0
DYD3_k127_4730165_6 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003772 301.0
DYD3_k127_4730165_7 PFAM Major Facilitator Superfamily K08218 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009297 301.0
DYD3_k127_4730165_8 Divergent AAA domain protein K03655 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000002321 230.0
DYD3_k127_4730165_9 Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway K03707 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 3.5.99.2 0.000000000000000000000000000000000000000000000000000000004164 206.0
DYD3_k127_4782480_0 Elongator protein 3, MiaB family, Radical SAM - - - 1.22e-311 972.0
DYD3_k127_4782480_1 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003691 585.0
DYD3_k127_4782480_10 Transglutaminase-like superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000001413 236.0
DYD3_k127_4782480_11 ABC transporter K09812 - - 0.000000000000000000000000000000000000000000000000000000000000000001503 234.0
DYD3_k127_4782480_12 Carotenoid biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000392 210.0
DYD3_k127_4782480_13 Serine hydrolase (FSH1) K03928 - 3.1.1.1 0.0000000000000000000000000000000000000000000000000000000007022 213.0
DYD3_k127_4782480_14 Peptidase family M23 K21471 - - 0.00000000000000000000000000000000000000000000003337 192.0
DYD3_k127_4782480_15 lycopene cyclase - - - 0.00000000000000000000000000000000000000000000005832 178.0
DYD3_k127_4782480_16 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.0000000000000000000000000000000000000000000005093 179.0
DYD3_k127_4782480_17 Amidohydrolase - - - 0.0000000000000000000000000000000000000000001789 168.0
DYD3_k127_4782480_18 peptidase M23 - - - 0.0000000000000000000000000000000000000003082 162.0
DYD3_k127_4782480_19 6-phosphogluconate dehydrogenase - - - 0.000000000000000000000001579 115.0
DYD3_k127_4782480_2 FAD dependent oxidoreductase K09879 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001784 497.0
DYD3_k127_4782480_20 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.00000000000001603 76.0
DYD3_k127_4782480_21 maleate cis-trans isomerase K01799 - 5.2.1.1 0.00000000000005742 81.0
DYD3_k127_4782480_22 - - - - 0.00000000007239 73.0
DYD3_k127_4782480_3 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002334 476.0
DYD3_k127_4782480_4 OB-fold nucleic acid binding domain K03601 - 3.1.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004804 389.0
DYD3_k127_4782480_5 large terminal subunit' - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000998 374.0
DYD3_k127_4782480_6 Protein of unknown function (DUF2867) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000043 347.0
DYD3_k127_4782480_7 FMN-dependent dehydrogenase K00104 - 1.1.3.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001946 345.0
DYD3_k127_4782480_8 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 337.0
DYD3_k127_4782480_9 Glycosyl transferase family 21 K00721 - 2.4.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002405 338.0
DYD3_k127_4849505_0 lipopolysaccharide transport K22110 - - 0.0 1388.0
DYD3_k127_4849505_1 Amylo-alpha-1,6-glucosidase - - - 4.291e-233 737.0
DYD3_k127_4849505_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006411 461.0
DYD3_k127_4849505_3 choline dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004438 307.0
DYD3_k127_4849505_4 MOSC domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004635 284.0
DYD3_k127_4849505_5 Periplasmic binding protein K02016 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004822 288.0
DYD3_k127_4849505_6 PFAM Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000001789 168.0
DYD3_k127_4849505_7 TLC ATP/ADP transporter K03301 - - 0.000000000000000009091 97.0
DYD3_k127_485503_0 Mur ligase, middle domain K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002198 332.0
DYD3_k127_485503_1 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006468 301.0
DYD3_k127_485503_2 Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.000000000000000000000000000000000000000000005975 177.0
DYD3_k127_4866238_0 Required for chromosome condensation and partitioning K03529 - - 3.855e-218 719.0
DYD3_k127_4866238_1 TIGRFAM ribonuclease, Rne Rng family K08300,K08301 - 3.1.26.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008235 536.0
DYD3_k127_4866238_10 NUDIX domain K03574 - 3.6.1.55 0.0000000000000000000000000000000000000000000000000000235 191.0
DYD3_k127_4866238_11 Mur ligase family, catalytic domain K02558 - 6.3.2.45 0.000000000000000000000000000000000000000000000003003 178.0
DYD3_k127_4866238_12 iron ion homeostasis K02012 - - 0.000000000000000000000000000000000000000000002575 180.0
DYD3_k127_4866238_13 Methyltransferase K08316 - 2.1.1.171 0.000000000000000000000000000000000000000001567 163.0
DYD3_k127_4866238_14 lactoylglutathione lyase activity - - - 0.00000000000000000000000000000000000000002425 157.0
DYD3_k127_4866238_15 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity K00950,K13940 - 2.7.6.3,4.1.2.25 0.0000000000000000000000000000000000001472 149.0
DYD3_k127_4866238_16 Belongs to the HesB IscA family K13628 - - 0.0000000000000000000000000001973 117.0
DYD3_k127_4866238_17 YacP-like NYN domain K06962 - - 0.00000000000000000000002486 105.0
DYD3_k127_4866238_18 PFAM Nitroreductase - - - 0.0000000000000000002229 96.0
DYD3_k127_4866238_19 - - - - 0.0000005099 54.0
DYD3_k127_4866238_2 Aminotransferase class I and II K10206 - 2.6.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003058 525.0
DYD3_k127_4866238_20 monooxygenase activity K00688,K15760,K16157,K16242,K18223,K22353,K22357 GO:0003674,GO:0003824,GO:0004497,GO:0005575,GO:0008150,GO:0008152,GO:0009987,GO:0015049,GO:0015050,GO:0015947,GO:0016491,GO:0016705,GO:0016709,GO:0032991,GO:0043446,GO:0044237,GO:0055114,GO:0071704,GO:1902494 1.14.13.227,1.14.13.236,1.14.13.25,1.14.13.69,2.4.1.1 0.0001063 47.0
DYD3_k127_4866238_3 PFAM aminotransferase, class I and II K00812 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002979 447.0
DYD3_k127_4866238_4 Binding-protein-dependent transport system inner membrane component K02011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007415 426.0
DYD3_k127_4866238_5 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 353.0
DYD3_k127_4866238_6 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004202 293.0
DYD3_k127_4866238_7 HNH endonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001234 275.0
DYD3_k127_4866238_8 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02010 - 3.6.3.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005187 277.0
DYD3_k127_4866238_9 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 GO:0003674,GO:0003824,GO:0004595,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 0.00000000000000000000000000000000000000000000000000000005114 199.0
DYD3_k127_4880769_0 Biotin carboxylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003988 441.0
DYD3_k127_4880769_1 Peptidase dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008103 364.0
DYD3_k127_4880769_2 Belongs to the D-alanine--D-alanine ligase family K01921,K01955 - 6.3.2.4,6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003154 336.0
DYD3_k127_4880769_3 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007873 336.0
DYD3_k127_4900767_0 carbohydrate transport K02027,K10236 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001602 424.0
DYD3_k127_4900767_1 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K10112 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 351.0
DYD3_k127_4900767_10 Carboxymethylenebutenolidase K01061 - 3.1.1.45 0.000000000000001159 86.0
DYD3_k127_4900767_2 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 344.0
DYD3_k127_4900767_3 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008743 342.0
DYD3_k127_4900767_4 transmembrane transport K02025,K10237,K15771 GO:0008150,GO:0040007,GO:0044110,GO:0044116,GO:0044117,GO:0044403,GO:0044419,GO:0051704 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007051 331.0
DYD3_k127_4900767_5 Succinyl-CoA ligase like flavodoxin domain K01905,K22224 - 6.2.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006708 328.0
DYD3_k127_4900767_6 Binding-protein-dependent transport system inner membrane component K02026,K10238 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004974 292.0
DYD3_k127_4900767_7 PFAM amidohydrolase 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005755 292.0
DYD3_k127_4900767_8 MmgE/PrpD family - - - 0.000000000000000000000000000000000000000000000000000000000000004608 234.0
DYD3_k127_4900767_9 acetyltransferase - - - 0.000000000000000000000000000000000000000000002708 168.0
DYD3_k127_4932270_0 Surface antigen K07277 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000202 344.0
DYD3_k127_4932270_1 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000006437 269.0
DYD3_k127_4932270_2 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.00000000000001935 87.0
DYD3_k127_4954361_0 PFAM ABC transporter related K06147 - - 3.113e-216 689.0
DYD3_k127_4954361_1 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004673 401.0
DYD3_k127_4954361_10 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K02051 - - 0.000000515 61.0
DYD3_k127_4954361_2 TIGRFAM conserved - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 368.0
DYD3_k127_4954361_3 PFAM Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002346 274.0
DYD3_k127_4954361_4 Citrate synthase, C-terminal domain K01647 - 2.3.3.1 0.00000000000000000000000000000000000000000000000000000000000009299 222.0
DYD3_k127_4954361_5 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.0000000000000000000000000000000000000000000000000001377 195.0
DYD3_k127_4954361_6 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000002844 175.0
DYD3_k127_4954361_7 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000001769 118.0
DYD3_k127_4954361_8 NMT1-like family K15576,K22067 - - 0.00000002502 66.0
DYD3_k127_4954509_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 540.0
DYD3_k127_4954509_1 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004279 332.0
DYD3_k127_4954509_10 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K06034 - 4.1.1.79 0.00000000000000000000000000261 117.0
DYD3_k127_4954509_11 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain - - - 0.0000000000000000000000001035 114.0
DYD3_k127_4954509_12 PFAM Bacterial lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.0000000000000000000000006667 117.0
DYD3_k127_4954509_13 Glycosyl transferase 4-like domain - - - 0.00000000000000000000002799 104.0
DYD3_k127_4954509_14 Glycosyltransferase Family 4 - - - 0.000000000000000000002009 101.0
DYD3_k127_4954509_15 Glycosyltransferase Family 4 K12995 - 2.4.1.348 0.00000000000002145 76.0
DYD3_k127_4954509_16 cell cycle K05589,K12065,K13052 - - 0.00000005258 60.0
DYD3_k127_4954509_2 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004276 305.0
DYD3_k127_4954509_3 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis K04479 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000002502 274.0
DYD3_k127_4954509_4 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000007402 230.0
DYD3_k127_4954509_5 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000000000002565 225.0
DYD3_k127_4954509_6 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.000000000000000000000000000000000000000000000000001103 184.0
DYD3_k127_4954509_7 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0030312,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363 4.2.99.18 0.0000000000000000000000000000000000000000005283 162.0
DYD3_k127_4954509_8 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.0000000000000000000000000000000000000000181 155.0
DYD3_k127_4954509_9 Is also involved in protein lipoylation via its role as an octanoyl lipoyl carrier protein intermediate K02437 GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 - 0.0000000000000000000000000000000009921 134.0
DYD3_k127_4956057_0 Cytochrome c - - - 0.0 1110.0
DYD3_k127_4956057_1 Fe-S oxidoreductase - - - 6.289e-307 952.0
DYD3_k127_4956057_2 Cytochrome c - - - 5.159e-237 747.0
DYD3_k127_4956057_3 Putative modulator of DNA gyrase K03568 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0019538,GO:0043170,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564 - 8.054e-210 661.0
DYD3_k127_4956057_4 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001666 552.0
DYD3_k127_4956057_5 Putative modulator of DNA gyrase K03592 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002242 516.0
DYD3_k127_4956057_6 Glyceraldehyde-3-phosphate dehydrogenase K00150 - 1.2.1.59 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007475 427.0
DYD3_k127_4956057_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000001994 233.0
DYD3_k127_4956057_8 Uncharacterized ACR, COG1430 K09005 - - 0.000000000000000000000000000000005099 134.0
DYD3_k127_4956057_9 helix_turn_helix isocitrate lyase regulation - - - 0.00000000000000000506 86.0
DYD3_k127_4984147_0 Putative methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004629 507.0
DYD3_k127_4984147_1 protein related to plant photosystem II stability assembly factor - - - 0.0000000000203 72.0
DYD3_k127_4988856_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002144 601.0
DYD3_k127_4988856_1 protein involved in outer membrane biogenesis K07289 - - 0.00000005951 65.0
DYD3_k127_4988856_2 peptidase U32 K08303 - - 0.00003865 49.0
DYD3_k127_5139471_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372 - - 0.0 1013.0
DYD3_k127_5139471_1 nitrite transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003525 471.0
DYD3_k127_515184_0 PFAM major facilitator superfamily MFS_1 K03446 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005357 345.0
DYD3_k127_515184_1 Major facilitator Superfamily - - - 0.0000000000000000000000001943 120.0
DYD3_k127_5229961_0 Fumarate reductase flavoprotein C-term - - - 1.508e-198 634.0
DYD3_k127_5229961_1 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.0000000000000000000000000000000000000000000000000006436 192.0
DYD3_k127_5229961_2 2Fe-2S iron-sulfur cluster binding domain - - - 0.00000000000000000000000000000007957 128.0
DYD3_k127_5229961_3 metal-dependent hydrolase with the TIM-barrel fold - - - 0.000000000000000000000008127 109.0
DYD3_k127_5229961_4 MiaB-like tRNA modifying enzyme K18707 - 2.8.4.5 0.000000001741 63.0
DYD3_k127_5285766_0 3-octaprenyl-4-hydroxybenzoate carboxy-lyase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008111 480.0
DYD3_k127_5285766_1 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006491 475.0
DYD3_k127_5315339_0 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 379.0
DYD3_k127_5315339_1 Molybdenum Cofactor Synthesis C K03639 - 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000001314 225.0
DYD3_k127_5316729_0 Sigma-54 interaction domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004413 359.0
DYD3_k127_5316729_1 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000001638 150.0
DYD3_k127_5316729_2 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.00000000000000000000000000007593 119.0
DYD3_k127_5316729_3 Belongs to the peptidase M48B family K03799 - - 0.0001622 48.0
DYD3_k127_5328824_0 Belongs to the ClpA ClpB family K03694 - - 1.325e-199 631.0
DYD3_k127_5328824_1 Peptidase M48 K06013 - 3.4.24.84 0.0000001968 55.0
DYD3_k127_5338993_0 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002179 441.0
DYD3_k127_5338993_1 MlaA lipoprotein K04754 - - 0.000000000000000000000000000000000000000000000000000000000000000004965 235.0
DYD3_k127_5378897_0 Domain of unknown function (DUF3536) - - - 2.508e-296 930.0
DYD3_k127_5378897_1 PFAM Bacterial protein of - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009317 368.0
DYD3_k127_5378897_2 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.00000000000001531 74.0
DYD3_k127_5378897_3 AMP binding - - - 0.0000124 56.0
DYD3_k127_5421486_0 Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001693 306.0
DYD3_k127_5421486_1 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000000003186 228.0
DYD3_k127_5421486_2 Amidohydrolase K03392 - 4.1.1.45 0.00000000000000000000000000000003192 137.0
DYD3_k127_5421486_3 ABC transporter, phosphonate, periplasmic substrate-binding protein K02051 - - 0.00000000000000003573 93.0
DYD3_k127_5421486_4 Iron-binding zinc finger CDGSH type - - - 0.0000000000001275 76.0
DYD3_k127_5421486_5 conserved protein, contains double-stranded beta-helix domain - - - 0.000001012 55.0
DYD3_k127_5441061_0 mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007627 410.0
DYD3_k127_5441061_1 Zn-dependent alcohol dehydrogenases K00121 - 1.1.1.1,1.1.1.284 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003512 293.0
DYD3_k127_5441061_2 NMT1-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004139 250.0
DYD3_k127_5441061_3 thiamine-containing compound biosynthetic process K02051 - - 0.00000000000000000000000000002571 130.0
DYD3_k127_5441061_4 NMT1-like family - - - 0.00000000000000000000000008781 120.0
DYD3_k127_5447239_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 1280.0
DYD3_k127_5447239_1 NAD(P)-binding Rossmann-like domain - - - 3.748e-196 627.0
DYD3_k127_5447239_10 Amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000002126 195.0
DYD3_k127_5447239_11 maF-like protein K03215,K06287 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005623,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0030145,GO:0030312,GO:0036218,GO:0036221,GO:0042802,GO:0043167,GO:0043169,GO:0044464,GO:0046872,GO:0046914,GO:0047429,GO:0071944 2.1.1.190 0.00000000000000000000000000000000000000000000000001681 186.0
DYD3_k127_5447239_12 MEKHLA domain - - - 0.00000000000000000000000000000000000000000000001677 176.0
DYD3_k127_5447239_13 Bacterial lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.00000000001113 70.0
DYD3_k127_5447239_14 NMT1-like family K07080 - - 0.000002095 50.0
DYD3_k127_5447239_2 PFAM aminotransferase class I and II K10206,K14261 - 2.6.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003275 588.0
DYD3_k127_5447239_3 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000206 586.0
DYD3_k127_5447239_4 Proposed homoserine kinase K15635 - 5.4.2.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001751 465.0
DYD3_k127_5447239_5 TIGRFAM fructose-1,6-bisphosphatase, class II K02446 - 3.1.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 428.0
DYD3_k127_5447239_6 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05541 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 398.0
DYD3_k127_5447239_7 Carbamoyl-phosphate synthase small chain, CPSase domain K01956 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001973 356.0
DYD3_k127_5447239_8 Homoserine dehydrogenase K00003 - 1.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000008942 248.0
DYD3_k127_5447239_9 Carbamoyl-phosphate synthetase ammonia chain K01955 GO:0000050,GO:0000166,GO:0003674,GO:0003824,GO:0004087,GO:0004088,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005951,GO:0006082,GO:0006139,GO:0006206,GO:0006220,GO:0006221,GO:0006520,GO:0006525,GO:0006526,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016053,GO:0016597,GO:0016874,GO:0016879,GO:0016884,GO:0017076,GO:0018130,GO:0019438,GO:0019627,GO:0019637,GO:0019693,GO:0019752,GO:0019856,GO:0030554,GO:0031406,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046390,GO:0046394,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0071941,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000001686 210.0
DYD3_k127_5480466_0 all-trans-retinol 13,14-reductase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002738 561.0
DYD3_k127_5480466_1 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000294 391.0
DYD3_k127_5480466_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001369 338.0
DYD3_k127_5480466_3 Phenylacetate-CoA oxygenase K02609 - 1.14.13.149 0.00000000000000000000000000000000000003331 154.0
DYD3_k127_5480466_4 hyperosmotic response - - - 0.0000000000000000000000000000000000002434 149.0
DYD3_k127_5480466_5 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters - - - 0.0000000000000000000001028 108.0
DYD3_k127_5480466_6 Transposase K07483 - - 0.0000000000000000000003934 99.0
DYD3_k127_5480466_7 - - - - 0.00000000000000007764 87.0
DYD3_k127_5480466_8 Hemerythrin - - - 0.00000000000002354 79.0
DYD3_k127_5480466_9 PFAM Integral membrane protein TerC K05794 - - 0.000000000004497 70.0
DYD3_k127_5486524_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004814 299.0
DYD3_k127_5486524_1 PFAM 2-nitropropane dioxygenase NPD K00459 - 1.13.12.16 0.00000000000000000000000000000000000000000000000000000000229 213.0
DYD3_k127_5486524_2 COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family - - - 0.00000000000000000000002812 108.0
DYD3_k127_5486524_3 Luciferase-like monooxygenase - - - 0.00000007305 55.0
DYD3_k127_5486524_4 glycine betaine sarcosine D-proline reductase family - - - 0.0004132 44.0
DYD3_k127_5488882_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 2.989e-291 918.0
DYD3_k127_5488882_1 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005208 530.0
DYD3_k127_5488882_10 RecX family - - - 0.0000000000000001368 86.0
DYD3_k127_5488882_11 von Willebrand factor type A - - - 0.0000000001437 74.0
DYD3_k127_5488882_12 COG0607 Rhodanese-related sulfurtransferase - - - 0.00000007341 54.0
DYD3_k127_5488882_13 Rhodanese Homology Domain - - - 0.000002392 52.0
DYD3_k127_5488882_2 Belongs to the CinA family K03742,K03743 - 3.5.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002927 307.0
DYD3_k127_5488882_3 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001499 298.0
DYD3_k127_5488882_4 Putative glutamine amidotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003185 267.0
DYD3_k127_5488882_5 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.0000000000000000000000000000000000000000000000000000000000000000004721 246.0
DYD3_k127_5488882_6 Uncharacterised protein family UPF0047 - - - 0.000000000000000000000000000000000000000000001391 169.0
DYD3_k127_5488882_7 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.00000000000000000000000000000000000000000034 169.0
DYD3_k127_5488882_8 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.00000000000000000000000000008754 125.0
DYD3_k127_5488882_9 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.0000000000000000000005221 102.0
DYD3_k127_5495592_0 4,5-dihydroxyphthalate decarboxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003496 314.0
DYD3_k127_5495592_1 Amidohydrolase K03392 - 4.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000002128 235.0
DYD3_k127_5495592_2 NMT1-like family - - - 0.00000000001014 76.0
DYD3_k127_5502454_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 3.847e-226 717.0
DYD3_k127_5502454_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007343 347.0
DYD3_k127_5502454_2 ribosomal RNA methyltransferase RrmJ FtsJ K06442 - 2.1.1.226,2.1.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002969 284.0
DYD3_k127_5502454_3 Polyprenyl synthetase K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001746 281.0
DYD3_k127_5502454_4 Carotenoid biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000007371 190.0
DYD3_k127_5502454_5 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.00000000000000000000000000000000000000000000005832 178.0
DYD3_k127_5502454_6 Sigma-70 factor, region 1.1 K03086 - - 0.0000000000000000000000000000000000000000000002037 177.0
DYD3_k127_5502454_7 Yqey-like protein K09117 - - 0.000000000000000000000000000000000001525 143.0
DYD3_k127_5502454_8 Belongs to the bacterial ribosomal protein bS21 family K02970 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000009367 96.0
DYD3_k127_5502454_9 PFAM Colicin V production protein K03558 - - 0.0000000000002715 77.0
DYD3_k127_5562553_0 PFAM Prolyl oligopeptidase, N-terminal beta-propeller domain K01354 - 3.4.21.83 1.122e-274 859.0
DYD3_k127_5562553_1 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 2.115e-270 841.0
DYD3_k127_5562553_10 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001765 308.0
DYD3_k127_5562553_12 carboxypeptidase activity K01297 - 3.4.17.13 0.00000000000000000000000000000000000000000000000000000000000000000005902 241.0
DYD3_k127_5562553_13 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000709 235.0
DYD3_k127_5562553_14 TIGRFAM drug resistance transporter, EmrB QacA subfamily - - - 0.0000000000000000000000000000000000000000000000000000000006518 220.0
DYD3_k127_5562553_15 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000007349 193.0
DYD3_k127_5562553_16 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.00000000000000000000000000000000000000003082 154.0
DYD3_k127_5562553_17 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.0000000000000000000000000000000000000001225 152.0
DYD3_k127_5562553_18 PFAM Calcineurin-like phosphoesterase K07098 - - 0.0000000000000000000000000000001868 136.0
DYD3_k127_5562553_19 Thioredoxin-like - - - 0.00000000000000000000000000005202 124.0
DYD3_k127_5562553_2 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008582 612.0
DYD3_k127_5562553_20 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.00000000000000000000004926 105.0
DYD3_k127_5562553_21 mitochondrial translation K02959 GO:0000028,GO:0000217,GO:0000400,GO:0003674,GO:0003676,GO:0003677,GO:0003735,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006139,GO:0006259,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0016787,GO:0016788,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000003176 102.0
DYD3_k127_5562553_22 Belongs to the UPF0109 family K06960 - - 0.0000000000000000006181 90.0
DYD3_k127_5562553_23 Protein of unknown function (DUF507) - - - 0.0000000000000003111 83.0
DYD3_k127_5562553_24 Integral membrane protein CcmA involved in cell shape determination - - - 0.00000000001523 70.0
DYD3_k127_5562553_25 type I phosphodiesterase nucleotide pyrophosphatase - - - 0.0000000001434 74.0
DYD3_k127_5562553_26 SH3 type 3 domain protein K01447 - 3.5.1.28 0.0006697 45.0
DYD3_k127_5562553_3 MgsA AAA+ ATPase C terminal K07478 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001821 503.0
DYD3_k127_5562553_4 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006827 486.0
DYD3_k127_5562553_5 Binding-protein-dependent transport system inner membrane component K02033,K15585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006605 427.0
DYD3_k127_5562553_6 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001766 426.0
DYD3_k127_5562553_7 Mur ligase, middle domain K02558 - 6.3.2.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002043 392.0
DYD3_k127_5562553_8 Binding-protein-dependent transport system inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005532 368.0
DYD3_k127_5562553_9 PFAM Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004049 334.0
DYD3_k127_5568415_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 7.568e-256 811.0
DYD3_k127_5568415_1 AMP-binding enzyme C-terminal domain K02363 - 2.7.7.58,6.3.2.14 1.702e-228 719.0
DYD3_k127_5568415_10 Amidohydrolase K03392 - 4.1.1.45 0.00000000000000000000000000000048 134.0
DYD3_k127_5568415_11 PFAM AzlC - - - 0.0000000000000000000006605 104.0
DYD3_k127_5568415_12 thiamine-containing compound biosynthetic process K02051 - - 0.00000000000005249 83.0
DYD3_k127_5568415_13 Pyridoxamine 5'-phosphate oxidase K07006 - - 0.0000000000007098 74.0
DYD3_k127_5568415_14 aldo keto reductase - - - 0.0003365 45.0
DYD3_k127_5568415_2 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K16874 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006822 447.0
DYD3_k127_5568415_3 KR domain K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007527 336.0
DYD3_k127_5568415_4 CO dehydrogenase flavoprotein domain protein K03519 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003249 291.0
DYD3_k127_5568415_5 ABC transporter K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001477 269.0
DYD3_k127_5568415_6 membrane K02050 - - 0.000000000000000000000000000000000000000000000000000000000001335 218.0
DYD3_k127_5568415_7 2Fe-2S -binding domain protein K03518,K07302,K19819 - 1.2.5.3,1.3.99.16,1.5.99.4 0.0000000000000000000000000000000000000000000000000000000006202 208.0
DYD3_k127_5568415_8 Amidohydrolase K03392 - 4.1.1.45 0.00000000000000000000000000000000000000000000000000001553 201.0
DYD3_k127_5568415_9 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components K02051 - - 0.00000000000000000000000000000000000000000000007004 181.0
DYD3_k127_5572190_0 Amidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007841 371.0
DYD3_k127_5572190_1 GDP-mannose 4,6 dehydratase K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000006291 243.0
DYD3_k127_5572190_2 Amidohydrolase - - - 0.000000000000000000001467 106.0
DYD3_k127_559945_0 xanthine dehydrogenase activity K00087,K12528 - 1.17.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002552 402.0
DYD3_k127_559945_1 Catalytic LigB subunit of aromatic ring-opening dioxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007653 246.0
DYD3_k127_559945_2 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000005318 200.0
DYD3_k127_559945_3 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain - - - 0.000000000000000000000000000000000008839 144.0
DYD3_k127_559945_4 Dihydrodipicolinate synthetase family K01714,K22397 - 4.1.2.28,4.3.3.7 0.000000000000000000000000000000001245 141.0
DYD3_k127_559945_5 sulfopyruvate decarboxylase, alpha subunit K06034 - 4.1.1.79 0.0000000001237 68.0
DYD3_k127_559945_6 Rieske [2Fe-2S] domain - - - 0.000000009282 65.0
DYD3_k127_5613165_0 acetylesterase activity K01046 - 3.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000005162 235.0
DYD3_k127_5613165_1 CoA binding domain K06929 - - 0.00000000000000000000000000000000000000000000000000005016 189.0
DYD3_k127_5613165_2 Ribosomal protein L11 methyltransferase (PrmA) - - - 0.00000000000000000000000000000000000000000000001223 177.0
DYD3_k127_5613165_3 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.00000000000000000001475 94.0
DYD3_k127_5613165_4 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K02051,K15553 - - 0.000004041 59.0
DYD3_k127_5629324_0 FAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009028 547.0
DYD3_k127_5629324_1 Belongs to the cysteine synthase cystathionine beta- synthase family K01697 - 4.2.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007871 402.0
DYD3_k127_5629324_2 PIN domain K19686 - - 0.00000000000000000000000000000000000000000000000000000000002859 208.0
DYD3_k127_5629324_3 TIGRFAM looped-hinge helix DNA binding domain, AbrB family - - - 0.000000001129 63.0
DYD3_k127_5629324_4 FAD binding domain - - - 0.0000184 48.0
DYD3_k127_571246_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696,K06001 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005944 581.0
DYD3_k127_571246_1 Belongs to the TrpF family K01817 - 5.3.1.24 0.0000000000000000000000000000000000000000005654 164.0
DYD3_k127_574554_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00334,K00335 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000338 500.0
DYD3_k127_574554_1 NAD binding K00333,K13378 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0016020,GO:0044424,GO:0044464,GO:0071944 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004714 484.0
DYD3_k127_574554_10 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0004358 48.0
DYD3_k127_574554_2 FAD binding domain K05898,K13796 - 1.3.99.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008533 391.0
DYD3_k127_574554_3 enzyme of poly-gamma-glutamate biosynthesis (Capsule formation) K07282 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007352 335.0
DYD3_k127_574554_4 PFAM phosphoesterase, RecJ domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004644 329.0
DYD3_k127_574554_5 COG1905 NADH ubiquinone oxidoreductase 24 kD subunit K00334,K03943 - 1.6.5.3,1.6.99.3 0.000000000000000000000000000000000000000000000004099 179.0
DYD3_k127_574554_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.000000000000000000000000000000000000000103 156.0
DYD3_k127_574554_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0030964,GO:0032991,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0098796,GO:1901135,GO:1901360,GO:1901564,GO:1902494 1.6.5.3 0.000000000000000000000000000000003201 133.0
DYD3_k127_574554_8 Molydopterin dinucleotide binding domain K00123 - 1.17.1.9 0.000000000000000000000005805 103.0
DYD3_k127_574554_9 methyltransferase - - - 0.00008456 46.0
DYD3_k127_5778836_0 Proton-conducting membrane transporter K12137,K15828 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 2.288e-235 743.0
DYD3_k127_5778836_1 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000365 273.0
DYD3_k127_5778836_2 DNA-binding transcription factor activity K03892 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000009743 164.0
DYD3_k127_5778836_3 Serine threonine-protein kinase B K08884 - 2.7.11.1 0.0001851 48.0
DYD3_k127_5781217_0 TIGRFAM Acetolactate synthase, large subunit, biosynthetic K01652 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000005654 278.0
DYD3_k127_5781217_1 - - - - 0.00000000000000005396 90.0
DYD3_k127_5793738_0 TIM-barrel fold metal-dependent hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004302 297.0
DYD3_k127_5793738_1 Citrate synthase, C-terminal domain K01647 - 2.3.3.1 0.00000000000000000000000000000000000000000000000000000000000004945 223.0
DYD3_k127_5793738_2 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases - - - 0.00000000000000000000000000007532 120.0
DYD3_k127_5793738_3 NMT1-like family - - - 0.00000000001639 72.0
DYD3_k127_5800141_0 N-methylhydantoinase B acetone carboxylase, alpha subunit K01474 - 3.5.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001708 388.0
DYD3_k127_5800141_1 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000433 307.0
DYD3_k127_5800141_2 Uncharacterized conserved protein (COG2071) K09166 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007222 266.0
DYD3_k127_5800141_3 Carboxylesterase family K01432 - 3.5.1.9 0.0000000000000000000000000000000000000000000000000000000000000000003067 239.0
DYD3_k127_5800141_4 N-methylhydantoinase B acetone carboxylase, alpha subunit K01474 - 3.5.2.14 0.00000000000000000000000000000000000000000000000001761 190.0
DYD3_k127_5800141_5 SWI complex, BAF60b domains - - - 0.00000000000000000000000000000000002972 136.0
DYD3_k127_5821949_0 epimerase - - - 0.000000000000000000000000000000000000000000000000000009128 199.0
DYD3_k127_5821949_1 Rieske [2Fe-2S] domain - - - 0.0000000000000000000000004866 105.0
DYD3_k127_5821949_2 COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit K21323 - 1.14.13.229,1.14.19.48 0.000000000000000000001015 96.0
DYD3_k127_5821949_3 NMT1-like family K02051 - - 0.00000000000000000001476 103.0
DYD3_k127_5821949_4 Rieske [2Fe-2S] domain K15060 - - 0.00000006797 63.0
DYD3_k127_5829986_0 Cupin 2, conserved barrel domain protein K00450,K11948 - 1.13.11.38,1.13.11.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001737 286.0
DYD3_k127_5829986_1 Cupin 2, conserved barrel domain protein K00450,K11948 - 1.13.11.38,1.13.11.4 0.00000000000000000000000000000000000000000000003996 183.0
DYD3_k127_5829986_2 metal-dependent hydrolase of the TIM-barrel fold - - - 0.000000000000000000000000000000000000009001 160.0
DYD3_k127_5829986_3 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components - - - 0.0000008879 56.0
DYD3_k127_5829986_4 The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. The AddB nuclease domain is not required for chi fragment generation K16899 - 3.6.4.12 0.00007521 51.0
DYD3_k127_5832926_0 Protein conserved in bacteria K07793 - - 2.085e-210 666.0
DYD3_k127_5832926_1 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 585.0
DYD3_k127_5832926_2 Tripartite tricarboxylate transporter family receptor K07795 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002735 355.0
DYD3_k127_5832926_3 Amidohydrolase family K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000001008 271.0
DYD3_k127_5832926_4 PFAM amidohydrolase K07045 - - 0.000000000000000000000000000000001145 141.0
DYD3_k127_5832926_5 Lrp/AsnC ligand binding domain - - - 0.00000000000000000000000000000002034 131.0
DYD3_k127_5832926_6 Dienelactone hydrolase family K01061 - 3.1.1.45 0.00000000000000000000000000000003582 134.0
DYD3_k127_5832926_7 Tripartite tricarboxylate transporter TctB family K07794 - - 0.000000000000000000002973 100.0
DYD3_k127_5897240_0 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002171 338.0
DYD3_k127_5897240_1 Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K05685 - - 0.000000000006031 66.0
DYD3_k127_5902301_0 Alpha amylase, catalytic domain K06044 - 5.4.99.15 0.0 1133.0
DYD3_k127_5902301_1 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 0.0 1123.0
DYD3_k127_5902301_2 Alpha/beta hydrolase family K01175 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016787,GO:0016788,GO:0016790,GO:0044424,GO:0044444,GO:0044464,GO:0052689 - 0.00000000000000000000000000000000000000000000000000007833 191.0
DYD3_k127_5912055_0 PFAM Hydantoinase oxoprolinase K01473 - 3.5.2.14 9.956e-227 722.0
DYD3_k127_5912055_1 PFAM Hydantoinase B oxoprolinase K01474 - 3.5.2.14 5.913e-207 659.0
DYD3_k127_5922056_0 Belongs to the TPP enzyme family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004347 379.0
DYD3_k127_5922056_1 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000001781 223.0
DYD3_k127_5928684_0 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000002506 267.0
DYD3_k127_5928684_1 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000006112 207.0
DYD3_k127_5929813_0 LemA family K03744 - - 0.000000000000000000000000000000000000000000000000000000000812 211.0
DYD3_k127_5929813_1 metalloendopeptidase activity K03799 - - 0.00000000000000000000000000000000000000000000000000006964 201.0
DYD3_k127_5929813_2 Dehydrogenase K16422 - 1.1.3.46 0.00000000000000000000000000000000000000000000000001832 191.0
DYD3_k127_5929813_3 Endoribonuclease L-PSP K09022 - 3.5.99.10 0.0000000000000000000000000000000000000000004829 159.0
DYD3_k127_5929813_4 Transcription factor zinc-finger K09981 - - 0.00000000000000001323 90.0
DYD3_k127_5943696_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 1.86e-321 993.0
DYD3_k127_5943696_1 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) K01214 - 3.2.1.68 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000196 314.0
DYD3_k127_5943696_2 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002964 296.0
DYD3_k127_5943696_3 intermembrane phospholipid transfer K07323 - - 0.000000000000000000000000000000000000000001688 160.0
DYD3_k127_5943696_4 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08309 - - 0.00000000000000000002312 100.0
DYD3_k127_5943696_5 Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07714 - - 0.0000000000000000001755 93.0
DYD3_k127_5951618_0 PFAM Conserved carboxylase region K01571,K01960 - 4.1.1.3,6.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 554.0
DYD3_k127_5951618_1 ATPase associated with various cellular activities K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003463 426.0
DYD3_k127_5951618_10 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496 - 3.5.4.19 0.0000000000000000000000000000000000183 136.0
DYD3_k127_5951618_11 COG0457 FOG TPR repeat - - - 0.0000000002435 70.0
DYD3_k127_5951618_14 4Fe-4S binding domain K00395,K02572,K03616 - 1.8.99.2 0.00001215 55.0
DYD3_k127_5951618_2 Ethanolamine utilisation protein EutA K04019 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007736 410.0
DYD3_k127_5951618_3 ATP phosphoribosyltransferase K00765 - 2.4.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002149 392.0
DYD3_k127_5951618_4 Putative glutamine amidotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002606 381.0
DYD3_k127_5951618_5 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006141 301.0
DYD3_k127_5951618_6 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005315 285.0
DYD3_k127_5951618_7 Aerotolerance regulator N-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004996 262.0
DYD3_k127_5951618_8 PFAM Prenyltransferase squalene oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000008573 233.0
DYD3_k127_5951618_9 Domain of unknown function (DUF4175) - - - 0.000000000000000000000000000000000000000000000000000000000000377 241.0
DYD3_k127_5955261_0 ATPases associated with a variety of cellular activities K02010 - 3.6.3.30 0.00000000000000000000000000000000000000000000000000000000000000004452 232.0
DYD3_k127_5955261_1 Transmembrane secretion effector - - - 0.0000000000000000000000000000000000000000000000000000000000000002634 234.0
DYD3_k127_5955374_0 TIGRFAM amino acid carrier protein K03310 - - 8.579e-202 637.0
DYD3_k127_5955374_1 Zn-dependent hydrolases of the - - - 0.000000000000000000000000000000000000000000003008 174.0
DYD3_k127_6015730_0 Thiolase, C-terminal domain K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002828 357.0
DYD3_k127_6015730_1 arginyltransferase activity K21420 GO:0003674,GO:0003824,GO:0004057,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016598,GO:0016740,GO:0016746,GO:0016755,GO:0019538,GO:0019941,GO:0030163,GO:0036211,GO:0043170,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044464,GO:0051603,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 2.3.2.29 0.000000000000000000000000000000000000000000000000000000000006767 214.0
DYD3_k127_6015730_2 glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000000000000000000414 176.0
DYD3_k127_6015730_3 - - - - 0.00000000000000000000000000000000000000000000002681 171.0
DYD3_k127_6015730_4 EamA-like transporter family - - - 0.0000000000000000000000000000000000000002563 154.0
DYD3_k127_6015730_5 PFAM Bacterial regulatory proteins, gntR family - - - 0.0000000000000000000000000000000356 134.0
DYD3_k127_6015730_6 - - - - 0.0000000000000131 78.0
DYD3_k127_6020645_0 FAD linked oxidase - - - 1.575e-229 715.0
DYD3_k127_6020645_1 protoporphyrinogen oxidase activity K00231,K14266 - 1.14.19.9,1.3.3.15,1.3.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006761 435.0
DYD3_k127_6020645_2 PFAM amidohydrolase 2 - - - 0.0000009963 51.0
DYD3_k127_6028022_0 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005262 479.0
DYD3_k127_6028022_1 Amidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001905 366.0
DYD3_k127_6028022_2 endoribonuclease L-PSP - - - 0.000000000000000000000006182 105.0
DYD3_k127_6028022_3 DNA excision K02806 - - 0.0000000000005864 70.0
DYD3_k127_6075914_0 Aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 511.0
DYD3_k127_6075914_1 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003503 307.0
DYD3_k127_6075914_11 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.00000000000004212 76.0
DYD3_k127_6075914_12 Catalyzes the conversion of maleate to fumarate K01799 - 5.2.1.1 0.0000000000001941 79.0
DYD3_k127_6075914_13 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.000000003855 66.0
DYD3_k127_6075914_15 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000007239 61.0
DYD3_k127_6075914_16 - - - - 0.00005108 51.0
DYD3_k127_6075914_2 NADPH-dependent FMN reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000002723 232.0
DYD3_k127_6075914_3 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain - - - 0.000000000000000000000000000000000000001099 154.0
DYD3_k127_6075914_4 deacetylase K22278 - 3.5.1.104 0.00000000000000000000000000000000000004039 155.0
DYD3_k127_6075914_5 - - - - 0.00000000000000000000000000000003192 133.0
DYD3_k127_6075914_6 BrnA antitoxin of type II toxin-antitoxin system - - - 0.0000000000000000000000000009582 115.0
DYD3_k127_6075914_7 Sulfopyruvate decarboxylase K06034 GO:0003674,GO:0003824,GO:0006082,GO:0006732,GO:0006790,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016053,GO:0016829,GO:0016830,GO:0016831,GO:0019295,GO:0019296,GO:0044237,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0050545,GO:0051186,GO:0051188,GO:0071704,GO:1901576 4.1.1.79 0.00000000000000000000000002094 116.0
DYD3_k127_6075914_8 - - - - 0.00000000000000000286 96.0
DYD3_k127_6075914_9 Belongs to the UPF0337 (CsbD) family - - - 0.00000000000000007318 83.0
DYD3_k127_6085470_0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K01652 - 2.2.1.6 1.063e-271 850.0
DYD3_k127_6085470_1 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002063 609.0
DYD3_k127_6085470_10 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002952 280.0
DYD3_k127_6085470_11 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000009489 265.0
DYD3_k127_6085470_12 ACT domain K01653 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000004673 239.0
DYD3_k127_6085470_13 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000000000007427 244.0
DYD3_k127_6085470_14 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.00000000000000000000000000000000000000000000000000000000000000001155 232.0
DYD3_k127_6085470_15 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000009029 218.0
DYD3_k127_6085470_16 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000002796 183.0
DYD3_k127_6085470_17 Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000002806 170.0
DYD3_k127_6085470_18 PFAM phosphatidate cytidylyltransferase K00981 - 2.7.7.41 0.00000000000000000000000000000000000000004582 162.0
DYD3_k127_6085470_19 Glycoprotease family K14742 - - 0.0000000000000000000000000000000002264 141.0
DYD3_k127_6085470_2 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000248 493.0
DYD3_k127_6085470_20 - K09794 - - 0.000000000433 63.0
DYD3_k127_6085470_3 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005552 464.0
DYD3_k127_6085470_4 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003551 445.0
DYD3_k127_6085470_5 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 426.0
DYD3_k127_6085470_6 SMART PDZ DHR GLGF domain protein K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005616 347.0
DYD3_k127_6085470_7 Catalyzes the reversible phosphorylation of UMP to UDP K09903 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 336.0
DYD3_k127_6085470_8 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000336 312.0
DYD3_k127_6085470_9 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007854 290.0
DYD3_k127_6095244_0 Molybdopterin oxidoreductase Fe4S4 domain K00123 - 1.17.1.9 0.0 1119.0
DYD3_k127_6095244_1 protein conserved in bacteria K07793 - - 3.324e-221 695.0
DYD3_k127_6095244_2 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 512.0
DYD3_k127_6095244_3 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007797 382.0
DYD3_k127_6095244_4 formate dehydrogenase (NAD+) activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001584 320.0
DYD3_k127_6095244_5 Zn-dependent hydrolases of the beta-lactamase fold K13985 - 3.1.4.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004002 319.0
DYD3_k127_6095244_6 Tripartite tricarboxylate transporter TctB family - - - 0.00000000000000000000000000000000009778 138.0
DYD3_k127_6095244_7 Flagellar hook protein FlgE K02390 - - 0.00000004626 58.0
DYD3_k127_6095244_8 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.0000004024 52.0
DYD3_k127_611642_0 Belongs to the UbiD family K16874 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008122 272.0
DYD3_k127_611642_1 cation diffusion facilitator family transporter K16264 GO:0000041,GO:0003674,GO:0005215,GO:0005385,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006829,GO:0008150,GO:0008324,GO:0015075,GO:0015318,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0044464,GO:0046873,GO:0046915,GO:0051179,GO:0051234,GO:0055085,GO:0070838,GO:0071577,GO:0071944,GO:0072509,GO:0072511,GO:0098655,GO:0098660,GO:0098662 - 0.000000000000000000000000000000000000000000000000000000000000000000000000002745 263.0
DYD3_k127_611642_2 PFAM major facilitator superfamily MFS_1 - - - 0.000000000000000000000000000000000000000000006 181.0
DYD3_k127_6131982_0 Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis K03182 - 4.1.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005004 462.0
DYD3_k127_6131982_1 ABC-type Fe3 transport system permease component K02011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006266 426.0
DYD3_k127_6131982_2 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000005602 229.0
DYD3_k127_6131982_3 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000000000000000000000000005207 164.0
DYD3_k127_6145299_0 spermidine synthase activity K00797 GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008216,GO:0008295,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0034641,GO:0042401,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576 2.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009092 427.0
DYD3_k127_6147900_1 Creatinase/Prolidase N-terminal domain - - - 0.000000000000000000000001499 117.0
DYD3_k127_6147900_2 Glyoxalase-like domain - - - 0.0000000000007805 79.0
DYD3_k127_618587_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 1.771e-282 878.0
DYD3_k127_618587_1 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 498.0
DYD3_k127_618587_2 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 GO:0003674,GO:0003824,GO:0004156,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004658 280.0
DYD3_k127_618587_3 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075,K15780 - 2.4.2.8,6.3.4.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001241 286.0
DYD3_k127_618587_4 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 - 2.7.7.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000003845 267.0
DYD3_k127_618587_5 YbbR-like protein - - - 0.0000000000000000000000009693 115.0
DYD3_k127_618587_6 SpoVT / AbrB like domain - - - 0.000000000000000000004979 95.0
DYD3_k127_618587_7 PIN domain - - - 0.000007952 49.0
DYD3_k127_6215379_0 Cytochrome b(N-terminal)/b6/petB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002699 425.0
DYD3_k127_6215379_1 Amidohydrolase K10220 - 4.2.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008336 331.0
DYD3_k127_6215379_10 Glycosyltransferase family 87 - - - 0.0005894 52.0
DYD3_k127_6215379_2 Protein of unknown function (DUF3750) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003551 294.0
DYD3_k127_6215379_3 TIGRFAM drug resistance transporter, EmrB QacA subfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007021 293.0
DYD3_k127_6215379_4 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003097 282.0
DYD3_k127_6215379_5 abc transporter atp-binding protein K02013 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000000000000000000002172 244.0
DYD3_k127_6215379_6 oxidoreductase activity, acting on diphenols and related substances as donors K02636,K03886 - 1.10.9.1 0.0000000000000000000000000000000000000000000000000000000004496 206.0
DYD3_k127_6215379_7 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.00000000000000000000000000000000000000000000000000004392 191.0
DYD3_k127_6215379_8 40-residue YVTN family beta-propeller repeat - - - 0.00000000000000000000000000000000000002348 161.0
DYD3_k127_6215379_9 Major Facilitator Superfamily - - - 0.000000000000000000005394 99.0
DYD3_k127_6255977_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 1.361e-195 617.0
DYD3_k127_6255977_1 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 346.0
DYD3_k127_6255977_10 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000005224 201.0
DYD3_k127_6255977_11 Involved in the binding of tRNA to the ribosomes K02946 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000002884 174.0
DYD3_k127_6255977_12 binds to the 23S rRNA K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000000456 177.0
DYD3_k127_6255977_13 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000000000000000000000000005587 151.0
DYD3_k127_6255977_14 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.0000000000000000000000000000000000000131 147.0
DYD3_k127_6255977_15 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.0000000000000000000000000000000000005802 143.0
DYD3_k127_6255977_16 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000005814 142.0
DYD3_k127_6255977_17 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000002586 138.0
DYD3_k127_6255977_18 One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000758 132.0
DYD3_k127_6255977_19 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.000000000000000000000000006053 113.0
DYD3_k127_6255977_2 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 322.0
DYD3_k127_6255977_20 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.00000000000000000000000002069 111.0
DYD3_k127_6255977_21 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000002993 91.0
DYD3_k127_6255977_22 Ribosomal L29 protein K02904 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000004651 57.0
DYD3_k127_6255977_3 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000426 302.0
DYD3_k127_6255977_4 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000003124 257.0
DYD3_k127_6255977_5 Belongs to the universal ribosomal protein uS5 family K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000008424 231.0
DYD3_k127_6255977_6 Ribosomal protein L3 K02906 - - 0.00000000000000000000000000000000000000000000000000000000000000002948 234.0
DYD3_k127_6255977_7 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000001162 216.0
DYD3_k127_6255977_8 Forms part of the polypeptide exit tunnel K02926 - - 0.00000000000000000000000000000000000000000000000000000000000006314 219.0
DYD3_k127_6255977_9 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.000000000000000000000000000000000000000000000000000000006667 201.0
DYD3_k127_6274160_0 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 2.759e-209 663.0
DYD3_k127_6274160_1 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K00928,K12524 GO:0003674,GO:0003824,GO:0004072,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006553,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0019202,GO:0019752,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046451,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.3,2.7.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003209 505.0
DYD3_k127_6274160_2 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001784 411.0
DYD3_k127_6274160_3 MiaB-like tRNA modifying enzyme K18707 - 2.8.4.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005895 394.0
DYD3_k127_6274160_4 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008757 325.0
DYD3_k127_6274160_5 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005938 278.0
DYD3_k127_6274160_6 Bacterial transferase hexapeptide (six repeats) K00640 - 2.3.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000182 270.0
DYD3_k127_6274160_7 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 GO:0002949,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 - 0.000000000000000000000000000000000003466 142.0
DYD3_k127_6274160_8 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 GO:0003674,GO:0003824,GO:0004614,GO:0004615,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006040,GO:0006047,GO:0006048,GO:0006139,GO:0006464,GO:0006468,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008966,GO:0009058,GO:0009225,GO:0009226,GO:0009987,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0018130,GO:0019438,GO:0019538,GO:0034641,GO:0034654,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046349,GO:0046483,GO:0046777,GO:0055086,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901576 5.4.2.10 0.0000000000006027 71.0
DYD3_k127_6319382_0 Specifically methylates the cytosine at position 1962 (m5C1962) of 23S rRNA K06969 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008649,GO:0008757,GO:0009383,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 356.0
DYD3_k127_6319382_1 RadC-like JAB domain K03630 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000554 270.0
DYD3_k127_6319382_2 PFAM Peptidase M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006023 278.0
DYD3_k127_6319382_3 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.000000000000000000000000000000000000000000000000000000207 198.0
DYD3_k127_633997_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.0 1050.0
DYD3_k127_633997_1 Elongation factor Tu domain 2 K02355 - - 1.502e-231 737.0
DYD3_k127_633997_10 'Cold-shock' DNA-binding domain K03704 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006355,GO:0006950,GO:0008150,GO:0009266,GO:0009409,GO:0009628,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000000000000000002477 110.0
DYD3_k127_633997_11 - - - - 0.000000000000001959 78.0
DYD3_k127_633997_13 metal-dependent hydrolase of the TIM-barrel fold K07045 - - 0.00000006726 64.0
DYD3_k127_633997_14 Cystathionine beta-lyase K03889 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0040007,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.0002532 48.0
DYD3_k127_633997_2 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 343.0
DYD3_k127_633997_3 Belongs to the NadC ModD family K00767 GO:0003674,GO:0003824,GO:0004514,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016054,GO:0016740,GO:0016757,GO:0016763,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034213,GO:0034641,GO:0034654,GO:0042737,GO:0043436,GO:0043648,GO:0043649,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046395,GO:0046483,GO:0046496,GO:0046700,GO:0046874,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0072526,GO:0090407,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 2.4.2.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001165 289.0
DYD3_k127_633997_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000004035 251.0
DYD3_k127_633997_5 HTH domain K03524 - 6.3.4.15 0.0000000000000000000000000000000000000000000000000000000000000007795 228.0
DYD3_k127_633997_6 Urate oxidase N-terminal - - - 0.000000000000000000000000000000000000000000000000000000002789 208.0
DYD3_k127_633997_7 Polyprenyl synthetase K02523,K13787 GO:0003674,GO:0003824,GO:0004659,GO:0016740,GO:0016765 2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90 0.00000000000000000000000000000000000000000000000002622 192.0
DYD3_k127_633997_8 Amidohydrolase - - - 0.000000000000000000000000000000000000000000006246 176.0
DYD3_k127_633997_9 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000001183 170.0
DYD3_k127_6348502_0 Acetolactate synthase K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 319.0
DYD3_k127_6348502_1 Amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000009962 196.0
DYD3_k127_6348502_2 Histidine kinase K00936 - 2.7.13.3 0.00000000000000000000000001897 111.0
DYD3_k127_6348502_3 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K01825,K07516 - 1.1.1.35,4.2.1.17,5.1.2.3,5.3.3.8 0.0000792 51.0
DYD3_k127_6351534_0 ABC transporter transmembrane region K06147,K18889 - - 4.344e-197 630.0
DYD3_k127_6351534_1 Catalyzes the attachment of glycine to tRNA(Gly) K01880 - 6.1.1.14 0.0000000000000000000000000000000000000000001356 164.0
DYD3_k127_6351534_2 ABC transporter K06147,K18890 - - 0.0000000000000000000002352 100.0
DYD3_k127_6352045_0 Psort location CytoplasmicMembrane, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000232 596.0
DYD3_k127_6352045_1 Belongs to the UbiD family K03182 - 4.1.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002198 578.0
DYD3_k127_6352045_10 Binding-protein-dependent transport system inner membrane component K02011 - - 0.000000000000000000000000000000000000000000003057 181.0
DYD3_k127_6352045_11 FCD - - - 0.0000000000000000000000000009212 122.0
DYD3_k127_6352045_12 Luciferase-like monooxygenase - - - 0.00000000000000002828 84.0
DYD3_k127_6352045_2 TIGRFAM 40-residue YVTN family beta-propeller repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001695 565.0
DYD3_k127_6352045_3 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006356 394.0
DYD3_k127_6352045_4 COG1116 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component K02049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006123 332.0
DYD3_k127_6352045_5 Belongs to the ABC transporter superfamily K02010 - 3.6.3.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 326.0
DYD3_k127_6352045_6 Binding-protein-dependent transport system inner membrane component K02011 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002539 307.0
DYD3_k127_6352045_7 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM K03519 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000006467 235.0
DYD3_k127_6352045_8 2Fe-2S -binding domain K03518 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000008441 201.0
DYD3_k127_6352045_9 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000519 198.0
DYD3_k127_6355087_0 TIGRFAM phosphoenolpyruvate-protein phosphotransferase K08484 - 2.7.3.9 6.483e-198 644.0
DYD3_k127_6355087_1 Binding-protein-dependent transport system inner membrane component K02011 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 422.0
DYD3_k127_6355087_10 Enoyl-CoA hydratase/isomerase - - - 0.00000000000000000000000000000000000000000000006147 179.0
DYD3_k127_6355087_11 Pfam SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000001048 161.0
DYD3_k127_6355087_12 mandelate racemase muconate lactonizing K19802 - 5.1.1.20 0.000000000000000000000000000000000000024 157.0
DYD3_k127_6355087_13 lactoylglutathione lyase activity - - - 0.00000000000000000000000000000000006146 139.0
DYD3_k127_6355087_2 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004036 400.0
DYD3_k127_6355087_3 amino acid K03294,K13868 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003651 356.0
DYD3_k127_6355087_4 Phospholipase D Transphosphatidylase K06131 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 351.0
DYD3_k127_6355087_5 Peptidase, M16 K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002823 318.0
DYD3_k127_6355087_6 Peptidase M16 inactive domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004186 265.0
DYD3_k127_6355087_7 Amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000000006633 208.0
DYD3_k127_6355087_8 Pfam SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000002542 190.0
DYD3_k127_6355087_9 Met-10+ like-protein - - - 0.000000000000000000000000000000000000000000000000008793 189.0
DYD3_k127_6358855_0 Histidine Phosphotransfer domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 398.0
DYD3_k127_6358855_1 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001138 248.0
DYD3_k127_6358855_2 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000005916 270.0
DYD3_k127_6358855_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000007357 233.0
DYD3_k127_6358855_4 - - - - 0.0000000000000000000000000000000000000000000004992 177.0
DYD3_k127_6358855_5 Putative peptidoglycan binding domain - - - 0.000000005381 66.0
DYD3_k127_6358855_6 PFAM sigma-54 factor interaction domain-containing protein K13599 - - 0.0004185 44.0
DYD3_k127_6370874_0 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 8.257e-235 740.0
DYD3_k127_6370874_1 Proline dehydrogenase K13821 - 1.2.1.88,1.5.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003256 395.0
DYD3_k127_6370874_2 protein possibly involved in utilization of glycolate and propanediol - - - 0.000000000000000000000000000000006906 133.0
DYD3_k127_6376798_0 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000126 343.0
DYD3_k127_6376798_1 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004229 314.0
DYD3_k127_6376798_2 Deoxynucleoside kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006903 246.0
DYD3_k127_6376798_3 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.00000000000000000000000000000000000000000000000000000005114 199.0
DYD3_k127_6376798_4 Protein of unknown function (DUF502) - - - 0.00000000000000000000000000000000000000000000004429 177.0
DYD3_k127_6376798_5 Chromate resistance exported protein - - - 0.0000000000000000006866 90.0
DYD3_k127_6408667_0 Domain of unknown function (DUF4105) - - - 4.637e-203 650.0
DYD3_k127_6408667_1 NHL repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002235 369.0
DYD3_k127_6408667_10 PFAM major facilitator superfamily MFS_1 - GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944 - 0.0000000000636 74.0
DYD3_k127_6408667_2 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002698 359.0
DYD3_k127_6408667_3 Isochorismatase family - - - 0.000000000000000000000000000000000000000000000000000000002098 209.0
DYD3_k127_6408667_4 Protein of unknown function (DUF3015) - - - 0.000000000000000000000000000000000000000000001085 170.0
DYD3_k127_6408667_5 Cupin 2, conserved barrel domain protein K00452,K11312,K16953 - 1.13.11.6,4.4.1.3 0.000000000000000000000000000000000000000000005226 169.0
DYD3_k127_6408667_6 ACT domain - - - 0.000000000000000000000000000000001932 134.0
DYD3_k127_6408667_7 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K02439,K07390 GO:0003674,GO:0003824,GO:0004792,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0016740,GO:0016782,GO:0016783,GO:0044424,GO:0044464 2.8.1.1 0.00000000000000000000000000006884 119.0
DYD3_k127_6408667_8 TPM domain K06872 - - 0.0000000000000003026 89.0
DYD3_k127_6408667_9 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000002041 78.0
DYD3_k127_6413685_0 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000000000393 211.0
DYD3_k127_6413685_1 Glutathione-dependent formaldehyde-activating - - - 0.000000000000000000000000000000000000008798 151.0
DYD3_k127_6413685_2 Protein of unknown function (DUF3175) - - - 0.000000000000000000000000000000002487 133.0
DYD3_k127_6413685_3 - - - - 0.00001774 47.0
DYD3_k127_6413685_4 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000314 48.0
DYD3_k127_6422150_0 Type II secretion system (T2SS), protein K K02460 - - 0.000000000000000000000000000000000000003447 161.0
DYD3_k127_6422150_1 General secretion pathway protein K02461 - - 0.000000000181 74.0
DYD3_k127_6422150_2 Prokaryotic N-terminal methylation motif K02458 - - 0.00000006748 59.0
DYD3_k127_6422150_3 Type II secretion system (T2SS), protein M subtype b - - - 0.0000194 56.0
DYD3_k127_6422150_4 protein transport across the cell outer membrane K02246,K02457,K02459,K02672,K08084 - - 0.0001828 53.0
DYD3_k127_6422150_5 General secretion pathway protein H K02457 - - 0.0004975 47.0
DYD3_k127_6443470_0 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.0000000000000000000000000000000000000000000000000000000000000002499 228.0
DYD3_k127_6443470_1 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000004709 198.0
DYD3_k127_6443470_2 Isochorismatase family - - - 0.00000000000000000000000000000000001082 143.0
DYD3_k127_6481275_0 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009403 298.0
DYD3_k127_6481275_1 Protein of unknown function (DUF421) - - - 0.000000000000000000000000000000000000000000000000001864 185.0
DYD3_k127_6481275_2 - - - - 0.000000000000000000000000002976 117.0
DYD3_k127_6481275_3 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.0000000000673 69.0
DYD3_k127_6483657_0 Bacterial regulatory helix-turn-helix protein, lysR family K03717 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004866 360.0
DYD3_k127_6483657_1 Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000008224 201.0
DYD3_k127_6488661_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015672,GO:0015980,GO:0015988,GO:0015990,GO:0016020,GO:0022900,GO:0022904,GO:0034220,GO:0044237,GO:0044464,GO:0045333,GO:0051179,GO:0051234,GO:0055085,GO:0055114,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:1902600 1.9.3.1 2.673e-209 665.0
DYD3_k127_6488661_1 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004028 582.0
DYD3_k127_6488661_10 Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate K06989 - 1.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000004398 234.0
DYD3_k127_6488661_11 Amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000616 196.0
DYD3_k127_6488661_12 Cytochrome c oxidase, subunit III K02276,K02299 - 1.9.3.1 0.000000000000000000000000000000000000000000002067 171.0
DYD3_k127_6488661_13 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000007763 175.0
DYD3_k127_6488661_14 SCO1/SenC K07152,K08976 - - 0.00000000000000000000000000000000000000003489 160.0
DYD3_k127_6488661_15 cytochrome c oxidase, subunit III K02276 - 1.9.3.1 0.00000000000000000000000000000000001326 144.0
DYD3_k127_6488661_16 Memo-like protein K06990 - - 0.000000000000000000004982 96.0
DYD3_k127_6488661_17 - - - - 0.0000000000000000007569 94.0
DYD3_k127_6488661_18 PFAM Uncharacterised protein family UPF0150 - - - 0.000000000000004005 82.0
DYD3_k127_6488661_19 thiamine-containing compound biosynthetic process K02051 - - 0.00000000000002948 85.0
DYD3_k127_6488661_2 PFAM Alcohol dehydrogenase zinc-binding domain protein K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000952 436.0
DYD3_k127_6488661_20 Evidence 5 No homology to any previously reported sequences - - - 0.0000000000009626 76.0
DYD3_k127_6488661_22 Copper resistance protein CopD K07245 - - 0.0000003481 59.0
DYD3_k127_6488661_23 PFAM YcfA family protein - - - 0.00004461 47.0
DYD3_k127_6488661_3 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008318 361.0
DYD3_k127_6488661_4 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008495,GO:0009058,GO:0009987,GO:0015980,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0030312,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0045333,GO:0046148,GO:0046483,GO:0048033,GO:0048034,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.141 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006355 331.0
DYD3_k127_6488661_5 alcohol dehydrogenase K00001,K00008 - 1.1.1.1,1.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000233 292.0
DYD3_k127_6488661_6 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006282 286.0
DYD3_k127_6488661_7 Cytochrome oxidase assembly protein K02259,K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007437 283.0
DYD3_k127_6488661_8 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003443 259.0
DYD3_k127_6488661_9 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009319,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016310,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0034641,GO:0042773,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0055086,GO:0055114,GO:0070069,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:1901135,GO:1901360,GO:1901564,GO:1902494 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000003134 249.0
DYD3_k127_6494530_0 Amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006289 275.0
DYD3_k127_6494530_1 thiamine-containing compound biosynthetic process K02051 - - 0.000000000000000005049 91.0
DYD3_k127_6494530_2 thiamine-containing compound biosynthetic process K02051 - - 0.00000006116 60.0
DYD3_k127_6494530_3 NMT1/THI5 like K02051 - - 0.0000005062 57.0
DYD3_k127_6506337_0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K01576,K01652 - 2.2.1.6,4.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002369 351.0
DYD3_k127_6506337_1 TIM-barrel fold metal-dependent hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007729 329.0
DYD3_k127_6506337_2 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000009695 207.0
DYD3_k127_6506337_3 Amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000000000606 205.0
DYD3_k127_6506337_4 Iron-containing redox enzyme K06137 - 1.3.3.11 0.000000000000000000000000000000000000000001344 165.0
DYD3_k127_6506337_5 NMT1-like family - - - 0.0000000000000000000000000000000000004085 153.0
DYD3_k127_6506337_6 Amidohydrolase K07045 - - 0.000000000000000000000002194 108.0
DYD3_k127_6506337_7 NMT1-like family - - - 0.0000000000000000000004081 108.0
DYD3_k127_6506337_8 Catalyzes the hydrolytic cleavage of a carbon-halogen bond in N-ethylammeline K12960 - 3.5.4.28,3.5.4.31 0.000000003136 63.0
DYD3_k127_6508483_0 Carbohydrate phosphorylase K00688 - 2.4.1.1 1.949e-236 743.0
DYD3_k127_6508483_1 CobW/HypB/UreG, nucleotide-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002653 554.0
DYD3_k127_6508483_2 PFAM sodium calcium exchanger membrane region K07301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000752 359.0
DYD3_k127_6508483_3 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008246 352.0
DYD3_k127_651203_0 Heat shock 70 kDa protein K04043 - - 9.503e-293 909.0
DYD3_k127_651203_1 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000004275 121.0
DYD3_k127_651203_2 Belongs to the small heat shock protein (HSP20) family - - - 0.000000000000000000000001668 108.0
DYD3_k127_651311_0 Alpha-amylase domain K05343 - 3.2.1.1,5.4.99.16 0.0 1384.0
DYD3_k127_651311_1 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB K16147 - 2.4.99.16 6.545e-281 879.0
DYD3_k127_651311_2 Sigma-54 interaction domain K07714,K07715 - - 3.036e-194 616.0
DYD3_k127_651311_3 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003314 274.0
DYD3_k127_651311_4 Putative regulatory protein - - - 0.000003815 50.0
DYD3_k127_651311_5 PFAM alpha amylase, catalytic K06044 - 5.4.99.15 0.00001274 51.0
DYD3_k127_6524760_0 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002775 322.0
DYD3_k127_6524760_1 Histidine kinase-like ATPases - - - 0.000000000000000000000002727 105.0
DYD3_k127_6588857_0 Tripartite tricarboxylate transporter TctA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002141 463.0
DYD3_k127_6588857_1 Catalytic LigB subunit of aromatic ring-opening dioxygenase K04101 - 1.13.11.8 0.0000000000000000000000000000000000000000000000005254 186.0
DYD3_k127_6588857_2 Cupin domain K00450 - 1.13.11.4 0.000000000000000000000000000000000000000000007667 169.0
DYD3_k127_6588857_3 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000001813 154.0
DYD3_k127_6588857_5 NfeD-like C-terminal, partner-binding - - - 0.0000000000001002 76.0
DYD3_k127_6588857_6 MATE efflux family protein - - - 0.00014 47.0
DYD3_k127_6588857_7 Aromatic-ring-opening dioxygenase LigAB, LigA subunit - - - 0.0002451 48.0
DYD3_k127_6604220_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 5.533e-260 829.0
DYD3_k127_6604220_1 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 - 4.1.1.32 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002432 550.0
DYD3_k127_6604220_2 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.000000000000000000000000000000000000000000000000000000000009201 218.0
DYD3_k127_6604220_3 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.0000000000000000000000004747 108.0
DYD3_k127_6604220_4 Protein of unknown function (DUF503) K09764 - - 0.000000000000000003047 87.0
DYD3_k127_6604220_5 Protein of unknown function (DUF448) K07742 - - 0.00000000993 61.0
DYD3_k127_6604260_0 Molybdopterin oxidoreductase Fe4S4 domain K00336 - 1.6.5.3 0.0 1148.0
DYD3_k127_6604260_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378,K13380 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 1.785e-298 923.0
DYD3_k127_6604260_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016021,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0031224,GO:0031226,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.000000000000000000000000000000000000004936 150.0
DYD3_k127_6604260_2 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein K00341 - 1.6.5.3 3.427e-242 764.0
DYD3_k127_6604260_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 5.598e-220 688.0
DYD3_k127_6604260_4 NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003417 604.0
DYD3_k127_6604260_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005124 509.0
DYD3_k127_6604260_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000176 302.0
DYD3_k127_6604260_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331,K13380 GO:0003674,GO:0003824,GO:0003954,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008137,GO:0008150,GO:0008152,GO:0009060,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015672,GO:0015980,GO:0015988,GO:0015990,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0030964,GO:0032991,GO:0034220,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0046034,GO:0046483,GO:0048037,GO:0050136,GO:0051179,GO:0051234,GO:0051536,GO:0051539,GO:0051540,GO:0055085,GO:0055086,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072521,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0098803,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1902600,GO:1990204 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004194 271.0
DYD3_k127_6604260_8 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000008706 227.0
DYD3_k127_6604260_9 Belongs to the complex I subunit 6 family K00339 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016021,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0031224,GO:0031226,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.0000000000000000000000000000000000000000000000000000006626 199.0
DYD3_k127_6622670_0 amino acid K03294 - - 5.044e-214 674.0
DYD3_k127_6622670_1 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000000000000000000000195 186.0
DYD3_k127_6622670_2 TIGRFAM reductive dehalogenase - - - 0.0000000000000000000000000002143 131.0
DYD3_k127_6622670_3 4 iron, 4 sulfur cluster binding K00528,K05524 - 1.18.1.2,1.19.1.1 0.0000000000000000004764 95.0
DYD3_k127_6622670_5 Haem-degrading - - - 0.0000000000000113 79.0
DYD3_k127_6622670_6 dehalogenase - - - 0.000000387 59.0
DYD3_k127_6624425_0 metal-dependent phosphohydrolase, HD sub domain K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000001617 278.0
DYD3_k127_6624425_1 Phosphoglycerate mutase family K08296 - - 0.000000000000000000000004167 108.0
DYD3_k127_6624425_2 Phosphate-starvation-inducible E - - - 0.000000000000000000002264 103.0
DYD3_k127_6624425_3 Catalyzes the reduction of arsenate As(V) to arsenite As(III) K03741 - 1.20.4.1 0.0000000000000000168 89.0
DYD3_k127_6624425_4 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.00000000009859 69.0
DYD3_k127_6624425_5 CHAD domain - - - 0.000008563 57.0
DYD3_k127_6645897_0 Cache domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003185 414.0
DYD3_k127_6669285_0 Penicillin-binding protein, dimerisation domain K03587 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 554.0
DYD3_k127_6669285_1 branched-chain amino acid transport system, permease component K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001422 426.0
DYD3_k127_6669285_10 Belongs to the MraZ family K03925 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.00000000000000000000000000000009571 129.0
DYD3_k127_6669285_11 C4-type zinc ribbon domain K07164 - - 0.000000000000000000000000002071 121.0
DYD3_k127_6669285_12 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.000000000000000000000003565 113.0
DYD3_k127_6669285_13 AsmA-like C-terminal region K07289 - - 0.00000000000000002658 96.0
DYD3_k127_6669285_14 - - - - 0.000000000000006625 79.0
DYD3_k127_6669285_15 Membrane transport protein - - - 0.00000000000002322 74.0
DYD3_k127_6669285_17 antisigma factor binding K04749 - - 0.0000000002838 66.0
DYD3_k127_6669285_18 Evidence 5 No homology to any previously reported sequences - - - 0.000000001351 63.0
DYD3_k127_6669285_2 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002783 347.0
DYD3_k127_6669285_3 ribonuclease BN K07058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004416 324.0
DYD3_k127_6669285_4 PFAM ABC transporter related K01995,K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005602 298.0
DYD3_k127_6669285_5 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005234 297.0
DYD3_k127_6669285_6 ATPases associated with a variety of cellular activities K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000152 292.0
DYD3_k127_6669285_7 FAD linked oxidases, C-terminal domain K00803 - 2.5.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003099 296.0
DYD3_k127_6669285_8 Rhomboid family - - - 0.000000000000000000000000000000000000000000000000000000001595 208.0
DYD3_k127_6669285_9 Reverse transcriptase-like K03469,K06864 - 3.1.26.4 0.00000000000000000000000000000000002467 149.0
DYD3_k127_6733403_0 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006904 443.0
DYD3_k127_6733403_1 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003493 407.0
DYD3_k127_6733403_2 nitrogen compound transport K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006529 352.0
DYD3_k127_6733403_3 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 328.0
DYD3_k127_6733403_4 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004782 308.0
DYD3_k127_6733403_5 Cytochrome C assembly protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000001612 241.0
DYD3_k127_6733403_6 Belongs to the precorrin methyltransferase family K13542 - 2.1.1.107,4.2.1.75 0.00000000000000000000000000000000000000000000000000000000000000006091 232.0
DYD3_k127_6733403_7 Belongs to the ALAD family K01698 - 4.2.1.24 0.00000000148 63.0
DYD3_k127_6735953_0 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor K00169,K19070 GO:0003674,GO:0003824,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016054,GO:0016491,GO:0016625,GO:0016903,GO:0019752,GO:0033609,GO:0033611,GO:0043436,GO:0043648,GO:0043649,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0071704,GO:1901575 1.2.7.1,1.2.7.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005207 479.0
DYD3_k127_6735953_1 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor K00170 - 1.2.7.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000211 341.0
DYD3_k127_6735953_10 Belongs to the universal stress protein A family - - - 0.0000000000000000000000000000000001189 145.0
DYD3_k127_6735953_11 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000002785 138.0
DYD3_k127_6735953_2 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537,K01539 - 3.6.3.8,3.6.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000195 302.0
DYD3_k127_6735953_3 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002083 295.0
DYD3_k127_6735953_4 Adenosine specific kinase K09129 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004745 254.0
DYD3_k127_6735953_5 Pyruvate ferredoxin/flavodoxin oxidoreductase K00172 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000001058 217.0
DYD3_k127_6735953_6 Bacterial protein of unknown function (DUF882) - - - 0.00000000000000000000000000000000000000000000000000308 188.0
DYD3_k127_6735953_7 - - - - 0.0000000000000000000000000000000000000000000000000867 185.0
DYD3_k127_6735953_8 Belongs to the universal stress protein A family - - - 0.0000000000000000000000000000000000000000001712 171.0
DYD3_k127_6735953_9 Belongs to the universal stress protein A family - - - 0.00000000000000000000000000000000000004042 154.0
DYD3_k127_6748277_0 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004211 492.0
DYD3_k127_6748277_1 COG0842 ABC-type multidrug transport system, permease component K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002765 478.0
DYD3_k127_6748277_2 TIGRFAM RND efflux system, outer membrane lipoprotein, NodT - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004058 469.0
DYD3_k127_6748277_3 ABC transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003706 372.0
DYD3_k127_6748277_4 TIM-barrel fold metal-dependent hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000123 257.0
DYD3_k127_6751186_0 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000001128 227.0
DYD3_k127_6751186_1 Regulatory protein GntR HTH K05799 - - 0.0000000000000000000000000000000000000354 152.0
DYD3_k127_6751186_2 Pyruvate synthase delta chain (Pyruvic-ferredoxin oxidoreductase delta chain) (PorD-like) K00171 - 1.2.7.1 0.000000000000003592 78.0
DYD3_k127_6751186_3 ABC-type nitrate sulfonate bicarbonate transport - - - 0.000000006397 65.0
DYD3_k127_6753200_0 PFAM tRNA synthetases class II (D, K and N) K01893 - 6.1.1.22 1.513e-196 622.0
DYD3_k127_6753200_1 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007669 543.0
DYD3_k127_6753200_10 Major facilitator Superfamily - - - 0.000000000000000000000004351 115.0
DYD3_k127_6753200_11 hydrolase, TatD family' K03424 GO:0003674,GO:0003824,GO:0004518,GO:0004536,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016020,GO:0016787,GO:0016788,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0071944,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901361,GO:1901575 - 0.0000000000000004594 82.0
DYD3_k127_6753200_12 SelR domain - - - 0.0005502 47.0
DYD3_k127_6753200_2 radical SAM K06871 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005832 524.0
DYD3_k127_6753200_3 DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004531 401.0
DYD3_k127_6753200_4 gluconolactonase K01053 - 3.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007428 391.0
DYD3_k127_6753200_5 uridine kinase K00876 - 2.7.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002528 270.0
DYD3_k127_6753200_6 - - - - 0.0000000000000000000000000000000000000000000000001365 186.0
DYD3_k127_6753200_7 membrane - - - 0.000000000000000000000000000000000000000001921 161.0
DYD3_k127_6753200_8 integral membrane protein - - - 0.00000000000000000000000000523 121.0
DYD3_k127_6753200_9 Cupin domain K11312 - - 0.0000000000000000000000001515 109.0
DYD3_k127_6784973_0 Phosphate acyltransferases K05939 - 2.3.1.40,6.2.1.20 0.0 1259.0
DYD3_k127_6784973_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 2.906e-232 742.0
DYD3_k127_6784973_10 Iron-containing redox enzyme - - - 0.00000000000000000000000000001011 136.0
DYD3_k127_6784973_11 Binding-protein-dependent transport system inner membrane component K02050,K15552,K15554 - - 0.0006339 46.0
DYD3_k127_6784973_2 GH3 auxin-responsive promoter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002946 454.0
DYD3_k127_6784973_3 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002124 394.0
DYD3_k127_6784973_4 COG1116 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component K02049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002153 264.0
DYD3_k127_6784973_5 carboxylic acid catabolic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007016 272.0
DYD3_k127_6784973_6 Belongs to the multicopper oxidase YfiH RL5 family K05810 GO:0003674,GO:0003824,GO:0005488,GO:0005507,GO:0005515,GO:0005575,GO:0005618,GO:0005623,GO:0008150,GO:0008152,GO:0016491,GO:0016679,GO:0016682,GO:0030312,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0044464,GO:0046872,GO:0046914,GO:0046983,GO:0055114,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000642 224.0
DYD3_k127_6784973_7 ABC-type nitrate sulfonate bicarbonate transport K02051 - - 0.0000000000000000000000000000000000000000001334 172.0
DYD3_k127_6784973_8 Protein of unknown function (DUF3617) - - - 0.0000000000000000000000000000000000000001828 155.0
DYD3_k127_6784973_9 - - - - 0.00000000000000000000000000000000001119 140.0
DYD3_k127_680041_0 Hydantoinase B/oxoprolinase K01474 - 3.5.2.14 2.612e-216 685.0
DYD3_k127_680041_1 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007208 502.0
DYD3_k127_680041_10 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000001935 241.0
DYD3_k127_680041_11 ATPase activity K10112 - - 0.00000000000000000000000000000000000000000000000000000000000000000003435 239.0
DYD3_k127_680041_12 MotA/TolQ/ExbB proton channel family K03562 - - 0.0000000000000000000000000000000000000000000000000000000000000000001919 237.0
DYD3_k127_680041_13 PFAM short chain dehydrogenase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000002183 211.0
DYD3_k127_680041_14 Hydantoinaseoxoprolinase domain protein K01469,K01473 - 3.5.2.14,3.5.2.9 0.00000000000000000000000000000000000000000000000000000004742 203.0
DYD3_k127_680041_15 PFAM small multidrug resistance protein K11741 - - 0.0000000000000000000000000000000000000000005403 158.0
DYD3_k127_680041_16 Amidohydrolase - - - 0.00000000000000000000000000000000000000007855 162.0
DYD3_k127_680041_17 PFAM KDPG and KHG aldolase K01625 - 4.1.2.14,4.1.3.42 0.00000000000000000000000000000000000001688 153.0
DYD3_k127_680041_18 Domain of unknown function (DUF4154) - - - 0.000000000000000000000000000000000000022 160.0
DYD3_k127_680041_19 PFAM Biopolymer transport protein ExbD TolR K03560 - - 0.000000000000000000000000000000000000662 143.0
DYD3_k127_680041_2 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007826 420.0
DYD3_k127_680041_20 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000000000000000000000000007247 133.0
DYD3_k127_680041_21 Belongs to the ompA family K03640 - - 0.0000000000000000000000000000000276 133.0
DYD3_k127_680041_22 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000001884 130.0
DYD3_k127_680041_23 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.0000000000000000000000002713 116.0
DYD3_k127_680041_24 Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C K06137 - 1.3.3.11 0.000000000000000000000001209 113.0
DYD3_k127_680041_25 Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000007317 98.0
DYD3_k127_680041_26 Preprotein translocase SecG subunit K03075 - - 0.0000000000000000000441 94.0
DYD3_k127_680041_27 Polymer-forming cytoskeletal - - - 0.000000000000000001024 91.0
DYD3_k127_680041_28 Helix-turn-helix domain - - - 0.00000002972 57.0
DYD3_k127_680041_29 peroxiredoxin activity - - - 0.00006371 46.0
DYD3_k127_680041_3 PFAM aromatic amino acid beta-eliminating lyase threonine aldolase K01620 - 4.1.2.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003018 392.0
DYD3_k127_680041_30 TonB C terminal K03646 - - 0.0001108 53.0
DYD3_k127_680041_4 3-octaprenyl-4-hydroxybenzoate carboxy-lyase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000244 389.0
DYD3_k127_680041_5 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003764 381.0
DYD3_k127_680041_6 TolB amino-terminal domain K03641 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000347 369.0
DYD3_k127_680041_7 Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family K01486 - 3.5.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001614 364.0
DYD3_k127_680041_8 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002928 292.0
DYD3_k127_680041_9 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.000000000000000000000000000000000000000000000000000000000000000000000000001652 264.0
DYD3_k127_6807475_0 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.00000000000000000000000000000002772 137.0
DYD3_k127_6807475_1 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000366 77.0
DYD3_k127_6807475_2 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000000003539 71.0
DYD3_k127_6807475_3 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000004164 65.0
DYD3_k127_6807475_4 2Fe-2S iron-sulfur cluster binding domain K04755 - - 0.00000000563 60.0
DYD3_k127_6807475_5 Belongs to the GST superfamily K11209 - - 0.0000006789 51.0
DYD3_k127_6807475_6 Carboxymuconolactone decarboxylase family - - - 0.00003641 51.0
DYD3_k127_6807475_7 Carboxymuconolactone decarboxylase family - - - 0.00006551 49.0
DYD3_k127_6809113_0 Sigma-54 interaction domain K07714 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009331 432.0
DYD3_k127_6809113_1 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source K01916 - 6.3.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 377.0
DYD3_k127_6809113_10 arylsulfatase activity - - - 0.00000000000000000000000000000000000000000000000003096 199.0
DYD3_k127_6809113_11 PFAM Prenyltransferase squalene oxidase - - - 0.00000000000000000000000000001189 130.0
DYD3_k127_6809113_12 Glutaredoxin K03676 - - 0.000000000003484 67.0
DYD3_k127_6809113_2 Carbon-nitrogen hydrolase K01916 - 6.3.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002499 315.0
DYD3_k127_6809113_3 Domain of unknown function (DUF362) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002007 286.0
DYD3_k127_6809113_4 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000000000003268 267.0
DYD3_k127_6809113_5 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008551 270.0
DYD3_k127_6809113_6 ZIP Zinc transporter K16267 - - 0.0000000000000000000000000000000000000000000000000000000000002959 219.0
DYD3_k127_6809113_7 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000005618 228.0
DYD3_k127_6809113_8 Choline/ethanolamine kinase K07102 - 2.7.1.221 0.0000000000000000000000000000000000000000000000000000000001825 216.0
DYD3_k127_6809113_9 Nucleotidyl transferase K00966 - 2.7.7.13 0.00000000000000000000000000000000000000000000000000003606 199.0
DYD3_k127_6839012_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 2.639e-257 815.0
DYD3_k127_6839012_1 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM K03519 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000004306 223.0
DYD3_k127_6839012_2 [2Fe-2S] binding domain - - - 0.00000000000000000000000000000000000000000000000000000000006706 210.0
DYD3_k127_6839012_3 - - - - 0.0000000001592 63.0
DYD3_k127_6839012_4 - - - - 0.00000000207 63.0
DYD3_k127_6839012_5 metal-dependent hydrolase of the TIM-barrel fold - - - 0.0001326 51.0
DYD3_k127_6844514_0 ABC transporter K15738 - - 2.225e-222 706.0
DYD3_k127_6844514_1 carboxylic ester hydrolase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000002552 236.0
DYD3_k127_6844514_2 KR domain - - - 0.00000000000000000000000000000000000000002353 154.0
DYD3_k127_6879868_0 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000001494 209.0
DYD3_k127_6879868_1 RNA recognition motif - - - 0.0000000000000000000000000000000001178 134.0
DYD3_k127_6879868_2 Methylase involved in ubiquinone menaquinone biosynthesis - - - 0.000000000001169 75.0
DYD3_k127_6879868_3 thiamine-containing compound biosynthetic process K02051 - - 0.00001457 51.0
DYD3_k127_6894470_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 1376.0
DYD3_k127_6895418_0 Methylase involved in ubiquinone menaquinone biosynthesis K07755 - 2.1.1.137 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002078 469.0
DYD3_k127_6895418_1 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016149,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003113 435.0
DYD3_k127_6895418_2 TIGRFAM radical SAM Cys-rich domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 374.0
DYD3_k127_6895418_3 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.00000000000000000000000000000000000002224 145.0
DYD3_k127_6895418_4 SNARE associated Golgi protein - - - 0.00000000000000000000000000000001936 132.0
DYD3_k127_6895418_5 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.0000000000000000000000000000002232 128.0
DYD3_k127_6895418_6 Phosphate transporter family K03306 - - 0.0000005439 53.0
DYD3_k127_6921920_0 PFAM Kelch motif - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004885 265.0
DYD3_k127_6921920_1 Amidohydrolase K07045 - - 0.0000000000000000000000000000000000000000000005769 179.0
DYD3_k127_6921920_2 - - - - 0.0000000000000000000002013 98.0
DYD3_k127_693125_0 COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000158 432.0
DYD3_k127_693125_1 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000004355 206.0
DYD3_k127_693125_2 Integral membrane protein CcmA involved in cell shape determination - - - 0.0000000000000000000000000000003367 129.0
DYD3_k127_693125_3 - - - - 0.000000000000000000000001094 107.0
DYD3_k127_693125_4 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components K02051 - - 0.00000001144 62.0
DYD3_k127_693125_6 Tetratricopeptide repeat - - - 0.00005988 53.0
DYD3_k127_6943954_0 PFAM glycosyl transferase family 20 K00697,K16055 - 2.4.1.15,2.4.1.347,3.1.3.12 7.437e-262 828.0
DYD3_k127_6943954_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 3.579e-254 789.0
DYD3_k127_6943954_10 PFAM Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000005475 128.0
DYD3_k127_6943954_11 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.00000000000000000000009569 107.0
DYD3_k127_6943954_12 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.00000000000000000121 93.0
DYD3_k127_6943954_13 Polymer-forming cytoskeletal - - - 0.000000000000005584 83.0
DYD3_k127_6943954_14 NMT1-like family - - - 0.00000000001629 70.0
DYD3_k127_6943954_15 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000001824 58.0
DYD3_k127_6943954_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 8.052e-241 752.0
DYD3_k127_6943954_3 AMP-binding enzyme C-terminal domain K08295 - 6.2.1.32 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 609.0
DYD3_k127_6943954_4 Aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 551.0
DYD3_k127_6943954_5 Malate/L-lactate dehydrogenase K00073 - 1.1.1.350 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001663 317.0
DYD3_k127_6943954_6 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000663 293.0
DYD3_k127_6943954_7 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000000000000000102 237.0
DYD3_k127_6943954_8 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000588 236.0
DYD3_k127_6943954_9 Class II Aldolase and Adducin N-terminal domain - - - 0.000000000000000000000000000000000000000000000000002631 190.0
DYD3_k127_6958479_0 nitrogen compound transport K02033,K15581 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0016020,GO:0022857,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008347 348.0
DYD3_k127_6958479_1 Permease K15582 - - 0.000000000000000000000000000000000000000000000000000000000001185 219.0
DYD3_k127_6958479_2 HipA N-terminal domain K07154 - 2.7.11.1 0.00000000000000000000000002658 109.0
DYD3_k127_6975124_0 Mediates influx of magnesium ions K03284,K16074 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002037 458.0
DYD3_k127_6975124_1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005241 445.0
DYD3_k127_6975124_10 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components K02051 - - 0.00000002494 65.0
DYD3_k127_6975124_2 Appr-1'-p processing enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000003024 222.0
DYD3_k127_6975124_3 Binding-protein-dependent transport system inner membrane component K02029,K10003 - - 0.00000000000000000000000000000000000000000000000000000000000298 216.0
DYD3_k127_6975124_4 amino acid ABC transporter K02029 - - 0.0000000000000000000000000000000000000000000000000000006967 200.0
DYD3_k127_6975124_5 glycolate biosynthetic process K01091 - 3.1.3.18 0.00000000000000000000000000000000000000000001074 170.0
DYD3_k127_6975124_6 ornithine cyclodeaminase activity K01750,K19244 - 1.4.1.1,4.3.1.12 0.00000000000000000000000000000000000000000001629 174.0
DYD3_k127_6975124_7 flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase - - - 0.00000000000000000000000000000000000000239 153.0
DYD3_k127_6975124_8 Glycine reductase complex selenoprotein A K10670 - 1.21.4.2,1.21.4.3,1.21.4.4 0.0000000000000000000000002493 108.0
DYD3_k127_6975124_9 Glycine reductase complex selenoprotein A K10670 - 1.21.4.2,1.21.4.3,1.21.4.4 0.00000000002734 65.0
DYD3_k127_6979841_0 mannose-1-phosphate guanylyltransferase activity K00971,K16011 - 2.7.7.13,5.3.1.8 0.0000000000000000000000000000000000000000000000000000000000001958 224.0
DYD3_k127_6979841_1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K04750 - - 0.0000000000000000000000000000000000000000000000000001021 194.0
DYD3_k127_6979841_2 Fibronectin type III domain - - - 0.0000000106 61.0
DYD3_k127_6979841_3 Flagellar Assembly Protein A K09749 - - 0.0000009237 59.0
DYD3_k127_699271_0 PFAM Cobyrinic acid ac-diamide synthase K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000003279 236.0
DYD3_k127_699271_1 Belongs to the ParB family K03497 - - 0.0000000000000000000000000000000000000000000000000001799 192.0
DYD3_k127_699271_2 Belongs to the ParB family K03497 - - 0.0000000000000005579 79.0
DYD3_k127_6995404_0 Alcohol dehydrogenase GroES-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008689 435.0
DYD3_k127_6995404_1 aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000784 378.0
DYD3_k127_6995404_2 DeoC/LacD family aldolase K08321 - 2.3.1.245 0.000000000000000000000000000000000000000000000000000002428 193.0
DYD3_k127_6995404_3 protein related to plant photosystem II stability assembly factor - - - 0.00000000000000000000000000000000000003894 158.0
DYD3_k127_6995404_4 Class ii aldolase K01628 - 4.1.2.17 0.00000000000000000000001687 109.0
DYD3_k127_6995404_5 Psort location Cytoplasmic, score 8.87 K02051 - - 0.00000000009668 73.0
DYD3_k127_6995404_6 ABC-type nitrate sulfonate bicarbonate transport K02051 - - 0.0000000001239 72.0
DYD3_k127_702204_0 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002197 415.0
DYD3_k127_702204_1 SelR domain K07305 - 1.8.4.12 0.0000000000000000000000000000000000000000000000001601 177.0
DYD3_k127_702204_2 Flavin containing amine oxidoreductase - - - 0.000000000000000000000000000000000000000003443 171.0
DYD3_k127_702204_3 - - - - 0.000001897 57.0
DYD3_k127_702204_4 redox protein, regulator of disulfide bond formation - - - 0.00002691 50.0
DYD3_k127_7023635_0 Belongs to the aldehyde dehydrogenase family K22187 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 467.0
DYD3_k127_7023635_1 Flavin reductase like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000006832 227.0
DYD3_k127_7023635_2 phosphinothricin N-acetyltransferase activity K03823,K18816 - 2.3.1.183,2.3.1.82 0.00000000000000000000000000000000000002613 158.0
DYD3_k127_7023635_3 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.00000000000000000000000002977 110.0
DYD3_k127_7023635_4 PFAM conserved - - - 0.00000000000005671 79.0
DYD3_k127_7023635_5 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K08234 - - 0.0000000000003084 75.0
DYD3_k127_7023635_6 membrane protein, TIGR04086 family - - - 0.0001757 51.0
DYD3_k127_7023710_0 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0 1563.0
DYD3_k127_7023710_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000421 337.0
DYD3_k127_7023710_2 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008171 291.0
DYD3_k127_7023710_3 GDSL-like Lipase/Acylhydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000257 249.0
DYD3_k127_7023710_4 - - - - 0.000000000000000000000000000000000002746 142.0
DYD3_k127_7023710_5 Protein of unknown function (DUF433) - - - 0.00000000000000000000000000004954 117.0
DYD3_k127_7033841_0 virulence factor MVIN family protein K03980 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005915 503.0
DYD3_k127_7033841_1 esterase K01432 - 3.5.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008057 369.0
DYD3_k127_7033841_2 Amidohydrolase K07045 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005609 302.0
DYD3_k127_7033841_3 PFAM 4-hydroxyphenylacetate 3-hydroxylase K00483 - 1.14.14.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 301.0
DYD3_k127_7033841_4 MmgE/PrpD family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007902 268.0
DYD3_k127_7033841_5 Nuclear protein SET K07117 - - 0.0000000000000000000000000000000000000000000001807 172.0
DYD3_k127_7033841_6 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000001953 181.0
DYD3_k127_7033841_7 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000003138 128.0
DYD3_k127_7033841_8 carboxymuconolactone decarboxylase - - - 0.000000000000000000000002101 109.0
DYD3_k127_7033841_9 Bacterial extracellular solute-binding protein K02012 - - 0.0001175 47.0
DYD3_k127_7071115_0 alpha-methylacyl-CoA racemase activity K18703 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0008410,GO:0016740,GO:0016782,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0047369 2.8.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 462.0
DYD3_k127_7071115_1 Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 414.0
DYD3_k127_7071115_2 PFAM Alcohol dehydrogenase GroES-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 321.0
DYD3_k127_7071115_3 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000004018 217.0
DYD3_k127_7071115_4 N-terminal half of MaoC dehydratase - - - 0.0000000000000000000000000000000001001 139.0
DYD3_k127_7071115_5 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000001489 54.0
DYD3_k127_7074477_0 PFAM oxidoreductase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 400.0
DYD3_k127_7074477_1 Rieske (2fe-2S) K15060 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004258 313.0
DYD3_k127_7074477_2 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000504 227.0
DYD3_k127_7074477_3 Rieske (2Fe-2S) domain-containing protein K15060 - - 0.000000000000000000000004943 110.0
DYD3_k127_7074477_4 COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS CutS homologs K00087,K03518 - 1.17.1.4,1.2.5.3 0.00000005252 61.0
DYD3_k127_7074477_5 Rieske (2Fe-2S) domain-containing protein K15060 - - 0.00000343 53.0
DYD3_k127_7129414_0 Belongs to the EPSP synthase family. MurA subfamily K00790 - 2.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 511.0
DYD3_k127_7129414_1 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001636 465.0
DYD3_k127_7129414_10 - - - - 0.0000000000000000000000000000001342 128.0
DYD3_k127_7129414_11 50S ribosomal protein L31 K02909 - - 0.000000000000000000000000001179 113.0
DYD3_k127_7129414_12 Redoxin - - - 0.00000000000000000000007741 101.0
DYD3_k127_7129414_13 Redoxin - - - 0.00000002486 56.0
DYD3_k127_7129414_14 Glutathione S-transferase, N-terminal domain - - - 0.0004795 46.0
DYD3_k127_7129414_2 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002077 426.0
DYD3_k127_7129414_3 Beta-ketoacyl synthase, N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001199 275.0
DYD3_k127_7129414_4 imidazoleglycerol-phosphate dehydratase activity K01693 GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000001216 274.0
DYD3_k127_7129414_5 TIGRFAM phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000003551 268.0
DYD3_k127_7129414_6 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005077 254.0
DYD3_k127_7129414_7 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.00000000000000000000000000000000000000000000000000000000000000007333 232.0
DYD3_k127_7129414_8 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000006926 197.0
DYD3_k127_7129414_9 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - - - 0.00000000000000000000000000000000001151 144.0
DYD3_k127_7130063_0 Aldehyde oxidase and xanthine dehydrogenase, a b hammerhead domain K03520 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 428.0
DYD3_k127_7140723_0 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004075 361.0
DYD3_k127_7140723_1 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.0000000000000000000000000000000000000000000000001292 180.0
DYD3_k127_7140723_2 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.00000000000000000000000000000000002975 141.0
DYD3_k127_7154505_0 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000000000000000000002004 150.0
DYD3_k127_7154505_1 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000004777 85.0
DYD3_k127_7190190_0 aminopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 368.0
DYD3_k127_7190190_1 VIT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002598 310.0
DYD3_k127_7190190_2 phosphatidylcholine synthase activity K01004,K17103 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006629,GO:0006644,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016740,GO:0016772,GO:0016780,GO:0019637,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0050520,GO:0071704,GO:0090407,GO:1901576 2.7.8.24,2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000000002704 233.0
DYD3_k127_7190190_3 PFAM Alkaline phosphatase K01077 - 3.1.3.1 0.00000000000000000000000000000000000000000000000000000001665 216.0
DYD3_k127_7190190_4 Glutathione S-transferase, C-terminal domain K03599 - - 0.00000000000000000000000000000001876 134.0
DYD3_k127_7190190_5 histidine kinase, dimerisation and phosphoacceptor region - - - 0.00000000000000000000000003932 108.0
DYD3_k127_7190190_6 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000004147 113.0
DYD3_k127_7190190_7 Glutaredoxin - - - 0.00000000001677 66.0
DYD3_k127_7202143_0 xanthine dehydrogenase activity K03520 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003865 604.0
DYD3_k127_7202143_1 2Fe-2S -binding domain K03518,K18022 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0016491,GO:0016903,GO:0044424,GO:0044464,GO:0048037,GO:0051536,GO:0051537,GO:0051540,GO:0055114 1.2.5.3,1.2.99.8 0.000000000000000000000000000000000000000005437 156.0
DYD3_k127_7204337_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 GO:0000166,GO:0000287,GO:0000502,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009266,GO:0009376,GO:0009408,GO:0009628,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0019904,GO:0022607,GO:0030554,GO:0031597,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034214,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043335,GO:0043933,GO:0044085,GO:0044238,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051259,GO:0065003,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1902494,GO:1904949,GO:1905368,GO:1905369 - 9.602e-195 618.0
DYD3_k127_7204337_1 TIGRFAM acetylornithine and succinylornithine K00821 - 2.6.1.11,2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008324 495.0
DYD3_k127_7204337_2 Amino acid kinase family K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005485 383.0
DYD3_k127_7204337_3 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000001528 261.0
DYD3_k127_7204337_4 Belongs to the 'phage' integrase family. XerC subfamily K03733,K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002517 267.0
DYD3_k127_7204337_5 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000001342 240.0
DYD3_k127_7204337_6 thiolester hydrolase activity K06889 - - 0.0000000000000000000001414 107.0
DYD3_k127_7225262_0 LVIVD repeat-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 400.0
DYD3_k127_7225262_1 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000213 310.0
DYD3_k127_7225262_2 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008536 274.0
DYD3_k127_7225262_3 Catalytic LigB subunit of aromatic ring-opening dioxygenase K04101 - 1.13.11.8 0.0000000000000000000000000000000000326 145.0
DYD3_k127_7225262_4 NMT1/THI5 like - - - 0.0000000001243 70.0
DYD3_k127_7225262_5 - - - - 0.0001455 52.0
DYD3_k127_734321_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.0 1302.0
DYD3_k127_734321_1 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002062 505.0
DYD3_k127_734321_2 DEAD DEAH box helicase K03654 - 3.6.4.12 0.00000111 51.0
DYD3_k127_745607_0 PFAM FAD linked oxidase domain protein - - - 2.309e-257 812.0
DYD3_k127_745607_1 Carboxyl transferase domain K01966,K17489 - 2.1.3.1,2.1.3.15,6.4.1.3 1.459e-235 739.0
DYD3_k127_745607_10 PFAM Electron transfer flavoprotein alpha beta-subunit K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000002137 229.0
DYD3_k127_745607_11 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000006805 219.0
DYD3_k127_745607_12 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.0000000000000000000000000000000000000000000000000005186 196.0
DYD3_k127_745607_13 Phenylacetic acid - - - 0.000000000000000000000000000000000001256 147.0
DYD3_k127_745607_14 Biotin-requiring enzyme - - - 0.00000000000000000000000000000000005287 139.0
DYD3_k127_745607_15 mttA/Hcf106 family K03116,K03117 - - 0.0000000000000001579 82.0
DYD3_k127_745607_16 HEAT repeat-containing protein - - - 0.00003322 54.0
DYD3_k127_745607_2 Biotin carboxylase K01961,K01965 - 6.3.4.14,6.4.1.2,6.4.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002347 572.0
DYD3_k127_745607_3 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005302 554.0
DYD3_k127_745607_4 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008736 518.0
DYD3_k127_745607_5 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000443 378.0
DYD3_k127_745607_6 Metallopeptidase family M24 K01262,K01271 - 3.4.11.9,3.4.13.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009255 376.0
DYD3_k127_745607_7 Histone deacetylase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003474 325.0
DYD3_k127_745607_8 Belongs to the PdaD family K02626 - 4.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006263 267.0
DYD3_k127_745607_9 electron transfer flavoprotein, alpha subunit K03522 - - 0.000000000000000000000000000000000000000000000000000000000000000001032 236.0
DYD3_k127_74801_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 1.973e-228 726.0
DYD3_k127_74801_1 RNA recognition motif - - - 0.00000000000000000000000000001693 122.0
DYD3_k127_74801_2 Belongs to the acylphosphatase family K01512 GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818 3.6.1.7 0.00000000000000000000004315 101.0
DYD3_k127_763329_0 Major Facilitator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003342 502.0
DYD3_k127_763329_1 DEAD DEAH box helicase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 492.0
DYD3_k127_763329_2 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000295 192.0
DYD3_k127_763329_3 PAS domain - - - 0.0000000000000000000000000000000000000000000000001074 181.0
DYD3_k127_763329_5 Dyp-type peroxidase family K07223 - - 0.0000000000003201 75.0
DYD3_k127_776199_0 Acetyl-coenzyme A synthetase N-terminus K01908 - 6.2.1.17 2.793e-305 946.0
DYD3_k127_776199_1 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000000000000000000003109 138.0
DYD3_k127_776199_2 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.00000002521 56.0
DYD3_k127_880486_0 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.00000000000000000000000000000002336 142.0
DYD3_k127_880486_1 ABC-type nitrate sulfonate bicarbonate transport K02051 - - 0.000000000000001469 88.0
DYD3_k127_880486_2 Ndr family K00433,K01055 - 1.11.1.10,3.1.1.24 0.0003405 46.0
DYD3_k127_899332_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03694,K03695 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944 - 0.0 1171.0
DYD3_k127_899332_1 Helix-hairpin-helix containing domain K03581 - 3.1.11.5 4.685e-208 670.0
DYD3_k127_899332_10 Circadian clock protein KaiC K08482 - - 0.00000000000000000000000000000000000003932 152.0
DYD3_k127_899332_11 lactoylglutathione lyase activity - - - 0.000000000000000000000000001725 114.0
DYD3_k127_899332_12 thiamine-containing compound biosynthetic process K02051 - - 0.0000000000000000000000002758 118.0
DYD3_k127_899332_13 Bacterial type II and III secretion system protein - - - 0.0000001943 61.0
DYD3_k127_899332_14 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0001209 45.0
DYD3_k127_899332_2 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599,K01719,K13542 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.107,4.1.1.37,4.2.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005775 455.0
DYD3_k127_899332_3 Transporter associated domain K03699,K06189 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005393 414.0
DYD3_k127_899332_4 Amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 377.0
DYD3_k127_899332_5 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002171 373.0
DYD3_k127_899332_6 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000691 282.0
DYD3_k127_899332_7 TIGRFAM drug resistance transporter, EmrB QacA subfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004316 282.0
DYD3_k127_899332_8 Amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000000000346 209.0
DYD3_k127_899332_9 Asp/Glu/Hydantoin racemase K01799 - 5.2.1.1 0.0000000000000000000000000000000000000000002961 166.0
DYD3_k127_909966_0 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00520,K21739 - 1.16.1.1 1.495e-233 730.0
DYD3_k127_909966_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823,K07250 - 2.6.1.19,2.6.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 536.0
DYD3_k127_909966_10 Bacterial extracellular solute-binding protein K02012 - - 0.000000000000000000000000000000000000000000000000000005218 203.0
DYD3_k127_909966_11 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000012 202.0
DYD3_k127_909966_12 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000004248 168.0
DYD3_k127_909966_13 FKBP-type peptidyl-prolyl cis-trans isomerase K03775 - 5.2.1.8 0.00000000000000000000000000000000000004982 148.0
DYD3_k127_909966_14 Isochorismatase family - - - 0.0000000000000000000000000000006774 129.0
DYD3_k127_909966_15 acetyltransferase - - - 0.0000000000000000000000009413 111.0
DYD3_k127_909966_16 AsmA-like C-terminal region - - - 0.000000000000000000000004157 119.0
DYD3_k127_909966_18 DNA polymerase X family - - - 0.000000000001132 72.0
DYD3_k127_909966_2 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004185 355.0
DYD3_k127_909966_3 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005844 357.0
DYD3_k127_909966_4 COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components K15585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006288 347.0
DYD3_k127_909966_5 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001086 286.0
DYD3_k127_909966_6 Family 5 K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001014 259.0
DYD3_k127_909966_7 ABC transporter substrate-binding protein K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000479 242.0
DYD3_k127_909966_8 Bacterial extracellular solute-binding proteins, family 5 Middle K02035,K13889 - - 0.00000000000000000000000000000000000000000000000000000000000000119 238.0
DYD3_k127_909966_9 - - - - 0.00000000000000000000000000000000000000000000000000000000004946 209.0
DYD3_k127_927010_0 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 372.0
DYD3_k127_927010_1 ribonucleoside-diphosphate reductase activity K07735 - - 0.00000000000000000000000000000000000000000000000000003816 196.0
DYD3_k127_927010_2 Pfam:Pyridox_oxidase - - - 0.0000000000000000000000000000000000000003019 154.0
DYD3_k127_927010_3 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000001981 154.0
DYD3_k127_927010_4 Haem-degrading - - - 0.00000000000000000000000000000000307 133.0
DYD3_k127_927010_5 Cupin 2, conserved barrel domain protein - - - 0.000000000000000005592 89.0
DYD3_k127_927010_6 to the N-terminal domain of Lon protease K01338,K07157 - 3.4.21.53 0.000000004119 58.0
DYD3_k127_927010_7 Domain of unknown function (DUF4349) - - - 0.0000008097 60.0
DYD3_k127_942196_0 TIGRFAM malto-oligosyltrehalose trehalohydrolase K01236 - 3.2.1.141 1.424e-257 807.0
DYD3_k127_942196_1 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006838 441.0
DYD3_k127_942196_2 Anabaena sensory rhodopsin transducer - - - 0.000000000000000000000000000000000000000000000000000000000003373 210.0
DYD3_k127_942196_3 Domain of unknown function (DUF296) K06934 - - 0.0000000000000000000000000000000000000000000000000000308 191.0
DYD3_k127_942196_4 intermembrane phospholipid transfer K07323 - - 0.000000000000000000000000000000000000000002223 162.0
DYD3_k127_942196_5 LexA-binding, inner membrane-associated putative hydrolase K07038 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000002318 157.0
DYD3_k127_942196_6 Amidohydrolase family - - - 0.00000000000000000000000000000006206 143.0
DYD3_k127_942196_7 synthase K00705,K06044 GO:0000272,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005984,GO:0005991,GO:0005992,GO:0006073,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009251,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016052,GO:0016853,GO:0016866,GO:0030978,GO:0030980,GO:0034637,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044275,GO:0044424,GO:0044444,GO:0044464,GO:0046351,GO:0047470,GO:0071704,GO:1901575,GO:1901576 2.4.1.25,5.4.99.15 0.0000000000000003796 79.0
DYD3_k127_942196_8 4-alpha-glucanotransferase K00705 - 2.4.1.25 0.00000000002605 66.0
DYD3_k127_967181_0 PFAM Hydantoinase B oxoprolinase K01474 - 3.5.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001694 451.0
DYD3_k127_967181_1 iron dependent repressor K02003,K02565,K15545 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002102 382.0
DYD3_k127_967181_2 thiamine-containing compound biosynthetic process K02051 - - 0.00000000000006605 83.0
DYD3_k127_980104_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 5.134e-286 901.0
DYD3_k127_980104_1 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.17 3.096e-240 751.0
DYD3_k127_980104_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.00000000000000000000000000000000000000000000009239 175.0
DYD3_k127_980104_11 Lysin motif K06194 - - 0.0000000000000000000000000000000000000000000002521 179.0
DYD3_k127_980104_12 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000000005857 104.0
DYD3_k127_980104_2 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004654,GO:0005488,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 4.84e-205 649.0
DYD3_k127_980104_3 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002943 559.0
DYD3_k127_980104_4 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 542.0
DYD3_k127_980104_5 PFAM peptidase M16 domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004976 407.0
DYD3_k127_980104_6 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005459 288.0
DYD3_k127_980104_7 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000001061 241.0
DYD3_k127_980104_8 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.0000000000000000000000000000000000000000000000000000000000001666 218.0
DYD3_k127_980104_9 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23 0.0000000000000000000000000000000000000000000000001122 181.0
DYD3_k127_991298_0 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001457 455.0
DYD3_k127_991298_1 metal-dependent hydrolase of the TIM-barrel fold K07045 - - 0.00000000000000000000000000000000000000000004621 172.0
DYD3_k127_991298_2 Domain of unknown function (DUF1989) K09967 - - 0.00000000000000000000000000006384 124.0
DYD3_k127_991298_3 NMT1-like family K02051 - - 0.00000000000000000000001682 112.0
DYD3_k127_991298_4 thiamine-containing compound biosynthetic process K02051 - - 0.00000001212 66.0
DYD3_k127_991298_5 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0007551 51.0
DYD3_k127_998906_0 COG3653 N-acyl-D-aspartate D-glutamate deacylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003857 412.0
DYD3_k127_998906_1 oligosaccharyl transferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001873 273.0
DYD3_k127_998906_2 ABC-type nitrate sulfonate bicarbonate transport system ATPase component K02049,K15555 - - 0.00000000000000000000000000000000000000000000000000000000000000000000008665 248.0
DYD3_k127_998906_3 Bacterial extracellular solute-binding protein K02012 - - 0.0000000000000000000000000000000000000000000000001357 190.0
DYD3_k127_998906_4 methyltransferase - - - 0.0000000000000000000000000000000000000000005192 168.0
DYD3_k127_998906_5 ornithine cyclodeaminase mu-crystallin K01750 - 4.3.1.12 0.000000000000000000000000000000000000000007011 166.0
DYD3_k127_998906_6 Asp/Glu/Hydantoin racemase K01799 - 5.2.1.1 0.00000000000000000000002401 111.0