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Overview

ID MAG00959
Name DYD3_bin.30
Sample SMP0027
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order Burkholderiales
Family SG8-39
Genus JBFKUL01
Species
Assembly information
Completeness (%) 57.49
Contamination (%) 1.35
GC content (%) 67.0
N50 (bp) 21,051
Genome size (bp) 1,988,152

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes1947

Gene name Description KEGG GOs EC E-value Score Sequence
DYD3_k127_1035301_0 TIGRFAM formate dehydrogenase, alpha subunit K00123 - 1.17.1.9 0.0 1427.0
DYD3_k127_1035301_1 formate-tetrahydrofolate ligase activity K01938 - 6.3.4.3 3.294e-287 889.0
DYD3_k127_1035301_10 glutamine amidotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004338 319.0
DYD3_k127_1035301_11 COG2057 Acyl CoA acetate 3-ketoacid CoA transferase, beta subunit K01040 - 2.8.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000749 298.0
DYD3_k127_1035301_12 Protein of unknown function (DUF2889) - - - 0.000000000000000000000000000000000000000000000000000000000000007131 221.0
DYD3_k127_1035301_13 Sodium/calcium exchanger protein K07301 - - 0.000000000000000000000000000000000000000002211 169.0
DYD3_k127_1035301_14 transcriptional regulator K10914 GO:0000166,GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006109,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010565,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010675,GO:0016020,GO:0017076,GO:0019219,GO:0019222,GO:0030312,GO:0030551,GO:0030552,GO:0030554,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0032993,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043565,GO:0044212,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0062012,GO:0065007,GO:0071944,GO:0080090,GO:0097159,GO:0097367,GO:0140110,GO:1901265,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2000874,GO:2001141 - 0.00000006055 64.0
DYD3_k127_1035301_15 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - - - 0.0004955 52.0
DYD3_k127_1035301_2 AMP-binding enzyme - - - 5.499e-285 903.0
DYD3_k127_1035301_3 24 kD subunit K00122 - 1.17.1.9 3.622e-267 832.0
DYD3_k127_1035301_4 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 6.179e-213 672.0
DYD3_k127_1035301_5 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 587.0
DYD3_k127_1035301_6 modulator of DNA gyrase K03568 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002393 573.0
DYD3_k127_1035301_7 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902,K08692 GO:0003674,GO:0003824,GO:0004774,GO:0004776,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0016874,GO:0016877,GO:0016878,GO:0031974,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0070013 6.2.1.5,6.2.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007677 503.0
DYD3_k127_1035301_8 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005688 471.0
DYD3_k127_1035301_9 COG1788 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit K01039 - 2.8.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005246 328.0
DYD3_k127_1039224_0 Acyl-CoA dehydrogenase, C-terminal domain K06446 - - 3.003e-211 662.0
DYD3_k127_1039224_1 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006666 563.0
DYD3_k127_1039224_10 Major facilitator Superfamily - - - 0.0000000000000000000000003025 119.0
DYD3_k127_1039224_11 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000504 85.0
DYD3_k127_1039224_12 - - - - 0.0000000000001512 77.0
DYD3_k127_1039224_13 COG3090 TRAP-type C4-dicarboxylate transport system small permease component - - - 0.0000000001294 70.0
DYD3_k127_1039224_14 Bacterial extracellular solute-binding protein, family 7 - - - 0.0000000006437 71.0
DYD3_k127_1039224_15 SNARE associated Golgi protein - - - 0.0000009366 52.0
DYD3_k127_1039224_2 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 498.0
DYD3_k127_1039224_3 III protein, CoA-transferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009148 475.0
DYD3_k127_1039224_4 domain, Protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005905 414.0
DYD3_k127_1039224_5 P-aminobenzoate N-oxygenase AurF - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003136 405.0
DYD3_k127_1039224_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006407 284.0
DYD3_k127_1039224_7 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003448 273.0
DYD3_k127_1039224_8 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000001128 153.0
DYD3_k127_1039224_9 PFAM Cell wall hydrolase - - - 0.00000000000000000000000002926 116.0
DYD3_k127_1051460_0 GTP-binding protein K06207 - - 1.996e-293 910.0
DYD3_k127_1051460_1 belongs to the aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 8.172e-234 738.0
DYD3_k127_1051460_10 Sulphur transport K07112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 467.0
DYD3_k127_1051460_11 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 418.0
DYD3_k127_1051460_12 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006271 394.0
DYD3_k127_1051460_13 transcriptional regulatory protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 378.0
DYD3_k127_1051460_14 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002034 367.0
DYD3_k127_1051460_15 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 344.0
DYD3_k127_1051460_16 PFAM MotA TolQ ExbB proton channel K03562 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 323.0
DYD3_k127_1051460_17 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002919 325.0
DYD3_k127_1051460_18 Fatty acid desaturase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002084 335.0
DYD3_k127_1051460_19 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001339 321.0
DYD3_k127_1051460_2 Involved in the tonB-independent uptake of proteins K03641 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006324 572.0
DYD3_k127_1051460_20 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006531 292.0
DYD3_k127_1051460_21 NQR2, RnfD, RnfE family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004102 283.0
DYD3_k127_1051460_22 AAA domain K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001408 280.0
DYD3_k127_1051460_23 COG2202 FOG PAS PAC domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004409 267.0
DYD3_k127_1051460_24 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000746 248.0
DYD3_k127_1051460_25 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.00000000000000000000000000000000000000000000000000000000000000000000002387 246.0
DYD3_k127_1051460_26 Ribosomal L25p family K02897 - - 0.0000000000000000000000000000000000000000000000000000000000000000000005531 246.0
DYD3_k127_1051460_27 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.00000000000000000000000000000000000000000000000000000000000000000002794 239.0
DYD3_k127_1051460_28 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.00000000000000000000000000000000000000000000000000000000000000000004014 237.0
DYD3_k127_1051460_29 cell division ATP-binding protein FtsE K09812 GO:0000166,GO:0003674,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008144,GO:0008150,GO:0009898,GO:0009987,GO:0016020,GO:0017076,GO:0019897,GO:0019898,GO:0030554,GO:0031234,GO:0032153,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0046677,GO:0050896,GO:0051301,GO:0071944,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000005171 239.0
DYD3_k127_1051460_3 Aldehyde dehydrogenase family K00141 - 1.2.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007652 593.0
DYD3_k127_1051460_30 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000001431 219.0
DYD3_k127_1051460_31 Rhomboid family K19225 - 3.4.21.105 0.00000000000000000000000000000000000000000000000000000001314 223.0
DYD3_k127_1051460_32 response regulator receiver K13041 - - 0.0000000000000000000000000000000000000000000000000000001576 207.0
DYD3_k127_1051460_33 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.00000000000000000000000000000000000000000000000000006534 197.0
DYD3_k127_1051460_34 TonB C terminal K03646 - - 0.00000000000000000000000000000000000000000000000003298 195.0
DYD3_k127_1051460_35 methyltransferase K08316 - 2.1.1.171 0.0000000000000000000000000000000000000000000000002443 189.0
DYD3_k127_1051460_36 Belongs to the ompA family K03640 - - 0.0000000000000000000000000000000000000000000003165 173.0
DYD3_k127_1051460_37 Outer membrane lipoprotein LolB - - - 0.0000000000000000000000000000000002651 139.0
DYD3_k127_1051460_38 Biopolymer transport protein ExbD TolR K03560 - - 0.0000000000000000000000000000001436 137.0
DYD3_k127_1051460_39 system-associated acyl-CoA thioesterase K07107 - - 0.00000000000000000000000000003375 122.0
DYD3_k127_1051460_4 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003273 544.0
DYD3_k127_1051460_40 OmpA-like transmembrane domain - - - 0.000000000000000001815 93.0
DYD3_k127_1051460_42 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.0002198 49.0
DYD3_k127_1051460_5 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007669 543.0
DYD3_k127_1051460_6 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001978 527.0
DYD3_k127_1051460_7 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 503.0
DYD3_k127_1051460_8 Uncharacterized protein conserved in bacteria (DUF2330) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008395 501.0
DYD3_k127_1051460_9 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002288 506.0
DYD3_k127_1111888_0 NADH dehydrogenase, FAD-containing subunit K03885 - 1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 533.0
DYD3_k127_1111888_1 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003125 482.0
DYD3_k127_1111888_2 ROK family K00847 - 2.7.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007629 411.0
DYD3_k127_1111888_3 Dehydrogenase K00020,K08319 - 1.1.1.31,1.1.1.411 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004411 376.0
DYD3_k127_1111888_4 Methionine biosynthesis protein MetW - - - 0.000000000000000000000000000000000000000000000000000000000000000000000009486 253.0
DYD3_k127_1111888_5 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) - - - 0.00000000000000000000000000000000000000000000000000008127 197.0
DYD3_k127_1111888_6 Thioesterase - - - 0.00000000000000000000000000000000000000004416 156.0
DYD3_k127_1111888_7 Protein of unknown function (DUF2846) - - - 0.000000000000000000000000000001108 137.0
DYD3_k127_1111888_8 CHAT domain - - - 0.00000000000000000003806 100.0
DYD3_k127_1151214_0 DegT/DnrJ/EryC1/StrS aminotransferase family K02805 - 2.6.1.59 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004488 504.0
DYD3_k127_1151214_1 Glycosyl transferase family 2 K20534 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005145 480.0
DYD3_k127_1151214_2 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005188 325.0
DYD3_k127_1151214_3 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000213 309.0
DYD3_k127_1151214_4 acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002259 250.0
DYD3_k127_1151214_5 methyltransferase activity - - - 0.00000000000000000000000000000000000000000000003763 178.0
DYD3_k127_1151214_6 EamA-like transporter family - - - 0.000000000000000000000000000000000007108 145.0
DYD3_k127_1161680_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1250.0
DYD3_k127_1161680_1 Belongs to the MurCDEF family K01924 - 6.3.2.8 1.18e-210 668.0
DYD3_k127_1161680_10 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly K03589 - - 0.0000000000000000000000000000000000000000000000000000000000000009118 228.0
DYD3_k127_1161680_11 Protein of unknown function (DUF815) K06923 - - 0.000000000000000000000000000000000000000000000000000000000000001647 225.0
DYD3_k127_1161680_12 Protein of unknown function (DUF721) - - - 0.0000000001426 68.0
DYD3_k127_1161680_13 - - - - 0.00000003556 57.0
DYD3_k127_1161680_2 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 4.415e-204 640.0
DYD3_k127_1161680_3 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009934 495.0
DYD3_k127_1161680_4 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008629 489.0
DYD3_k127_1161680_5 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004321 432.0
DYD3_k127_1161680_6 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 383.0
DYD3_k127_1161680_7 cell wall formation K00075 - 1.3.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004236 344.0
DYD3_k127_1161680_8 Peptidase family M23 K08259 - 3.4.24.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000815 334.0
DYD3_k127_1161680_9 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000006221 258.0
DYD3_k127_1181073_0 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009876 518.0
DYD3_k127_1181073_1 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005202 520.0
DYD3_k127_1181073_2 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003763 512.0
DYD3_k127_1181073_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004205 391.0
DYD3_k127_1181073_4 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002163 342.0
DYD3_k127_1181073_5 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.00000000000000000000000000000000000000000000000000000000000000000000007712 245.0
DYD3_k127_1181073_6 type 4 pilus biogenesis protein K02656 - - 0.0000000000000000000000000000000000000000000000000000000000000000000011 244.0
DYD3_k127_1181073_7 endonuclease III K01247 - 3.2.2.21 0.00000000000000000000000000000000000000000000000000000000000000000003806 250.0
DYD3_k127_1181073_8 Transcriptional regulator K15539 - - 0.0000000000000000000000000000000000000000671 163.0
DYD3_k127_1400823_0 Proton-conducting membrane transporter - - - 3.758e-281 878.0
DYD3_k127_1400823_1 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 GO:0001505,GO:0003674,GO:0003824,GO:0004375,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005960,GO:0006082,GO:0006520,GO:0006544,GO:0006546,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009069,GO:0009071,GO:0009987,GO:0016054,GO:0016491,GO:0016638,GO:0016642,GO:0017144,GO:0019464,GO:0019752,GO:0032991,GO:0042133,GO:0042135,GO:0042737,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0055114,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1902494,GO:1990204 1.4.4.2 8.545e-258 812.0
DYD3_k127_1400823_10 COG4237 Hydrogenase 4 membrane component (E) K12140 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003567 305.0
DYD3_k127_1400823_11 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004042 276.0
DYD3_k127_1400823_13 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000000000000001062 173.0
DYD3_k127_1400823_14 Helix-turn-helix XRE-family like proteins - - - 0.0000000000000000000000000000001734 124.0
DYD3_k127_1400823_2 PERMEase K06901 - - 4.14e-226 710.0
DYD3_k127_1400823_3 Proton-conducting membrane transporter K12141 - - 7.006e-226 719.0
DYD3_k127_1400823_4 NADH-ubiquinone oxidoreductase chain 49kDa - - - 4.25e-212 667.0
DYD3_k127_1400823_5 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004069 456.0
DYD3_k127_1400823_6 NADH dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000777 436.0
DYD3_k127_1400823_7 Allophanate hydrolase K01457 - 3.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 366.0
DYD3_k127_1400823_8 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001844 340.0
DYD3_k127_1400823_9 Isochorismatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004559 332.0
DYD3_k127_1454194_0 poly(R)-hydroxyalkanoic acid synthase K03821 - - 2.717e-265 829.0
DYD3_k127_1454194_1 Arginyl-tRNA synthetase K01887 - 6.1.1.19 4.88e-227 717.0
DYD3_k127_1454194_10 ABC-type Fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002071 307.0
DYD3_k127_1454194_11 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001586 280.0
DYD3_k127_1454194_12 EVE domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000006971 233.0
DYD3_k127_1454194_13 Thiol disulfide interchange protein K03673 - - 0.000000000000000000000000000000000000000000000000000000001834 207.0
DYD3_k127_1454194_14 COG0790 FOG TPR repeat, SEL1 subfamily K07126 - - 0.0000000000000000000000000000000000000000000000000003459 199.0
DYD3_k127_1454194_15 cell division protein - - - 0.000000000000000000000000000000000000000001977 164.0
DYD3_k127_1454194_16 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.0000000000000000000000000000586 120.0
DYD3_k127_1454194_2 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 2.47e-218 699.0
DYD3_k127_1454194_3 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K11085 - - 5.805e-217 687.0
DYD3_k127_1454194_4 TonB dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007213 618.0
DYD3_k127_1454194_5 Male sterility protein K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000611 554.0
DYD3_k127_1454194_6 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002068 532.0
DYD3_k127_1454194_7 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005951 377.0
DYD3_k127_1454194_8 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009273 328.0
DYD3_k127_1454194_9 Glycosyltransferase Family 4 K02844 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002566 316.0
DYD3_k127_1467721_0 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454,K02652 - - 6.266e-240 753.0
DYD3_k127_1467721_1 type II secretion system protein K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 505.0
DYD3_k127_1467721_2 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002577 421.0
DYD3_k127_1467721_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005808 266.0
DYD3_k127_1467721_4 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000001321 171.0
DYD3_k127_1467721_5 Histidine kinase-like ATPases - - - 0.0000000000000000000000000000000000000002672 154.0
DYD3_k127_1467721_6 general secretion pathway protein - - - 0.0000000000000000000000000000000000001038 161.0
DYD3_k127_1467721_7 Prokaryotic N-terminal methylation motif - - - 0.00000000000000000000000000000000002321 145.0
DYD3_k127_1467721_8 - - - - 0.0000000000000002916 91.0
DYD3_k127_1467721_9 - - - - 0.000000000000001695 87.0
DYD3_k127_1510635_0 CoA-binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 606.0
DYD3_k127_1510635_1 Serine-pyruvate aminotransferase archaeal aspartate aminotransferase K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002092 585.0
DYD3_k127_1510635_10 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007345 430.0
DYD3_k127_1510635_11 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006782 338.0
DYD3_k127_1510635_12 Belongs to the PdxA family K00097 - 1.1.1.262 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005805 331.0
DYD3_k127_1510635_13 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007227 286.0
DYD3_k127_1510635_14 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000000000000000000000002625 156.0
DYD3_k127_1510635_15 FCD - - - 0.0000000000000000000000000002161 117.0
DYD3_k127_1510635_16 Sterol carrier protein - - - 0.000000000000000000000004222 106.0
DYD3_k127_1510635_2 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 576.0
DYD3_k127_1510635_3 PFAM MmgE PrpD family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003967 557.0
DYD3_k127_1510635_4 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005686 537.0
DYD3_k127_1510635_5 CoA-transferase family III K07749 - 2.8.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001811 531.0
DYD3_k127_1510635_6 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009362 526.0
DYD3_k127_1510635_7 Oligopeptide/dipeptide transporter, C-terminal region K15583 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005156 461.0
DYD3_k127_1510635_8 Putative esterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000273 434.0
DYD3_k127_1510635_9 Belongs to the ABC transporter superfamily K10823 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 431.0
DYD3_k127_1623536_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 1.913e-295 919.0
DYD3_k127_1623536_1 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 3.807e-212 668.0
DYD3_k127_1623536_2 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002919 564.0
DYD3_k127_1623536_3 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 GO:0000166,GO:0000226,GO:0001817,GO:0001819,GO:0001906,GO:0001907,GO:0002376,GO:0002791,GO:0002793,GO:0003674,GO:0003824,GO:0004365,GO:0004857,GO:0004866,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005811,GO:0005829,GO:0005856,GO:0005886,GO:0005975,GO:0005996,GO:0006006,GO:0006007,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006417,GO:0006464,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006735,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0006950,GO:0006952,GO:0006955,GO:0006959,GO:0006996,GO:0007010,GO:0007017,GO:0008017,GO:0008092,GO:0008150,GO:0008152,GO:0008219,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009435,GO:0009605,GO:0009607,GO:0009620,GO:0009889,GO:0009890,GO:0009892,GO:0009894,GO:0009987,GO:0010033,GO:0010466,GO:0010468,GO:0010506,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0010941,GO:0010942,GO:0010951,GO:0012501,GO:0012505,GO:0015630,GO:0015631,GO:0016020,GO:0016043,GO:0016051,GO:0016052,GO:0016053,GO:0016241,GO:0016310,GO:0016491,GO:0016620,GO:0016740,GO:0016769,GO:0016903,GO:0017014,GO:0017144,GO:0017148,GO:0018119,GO:0018130,GO:0018193,GO:0018198,GO:0019222,GO:0019318,GO:0019319,GO:0019320,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019538,GO:0019637,GO:0019674,GO:0019693,GO:0019730,GO:0019752,GO:0019828,GO:0019904,GO:0030162,GO:0030234,GO:0030414,GO:0031090,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031329,GO:0031341,GO:0031343,GO:0031640,GO:0031647,GO:0031965,GO:0031967,GO:0031975,GO:0032268,GO:0032269,GO:0032787,GO:0032879,GO:0032880,GO:0032991,GO:0034097,GO:0034248,GO:0034249,GO:0034341,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035605,GO:0035606,GO:0035821,GO:0036094,GO:0036211,GO:0042221,GO:0042802,GO:0042866,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043086,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043412,GO:0043436,GO:0043891,GO:0043900,GO:0043902,GO:0043903,GO:0044003,GO:0044004,GO:0044068,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044364,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044531,GO:0044532,GO:0044533,GO:0045087,GO:0045861,GO:0046031,GO:0046034,GO:0046364,GO:0046365,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0048037,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050662,GO:0050707,GO:0050708,GO:0050714,GO:0050715,GO:0050789,GO:0050790,GO:0050794,GO:0050821,GO:0050832,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051171,GO:0051172,GO:0051186,GO:0051188,GO:0051222,GO:0051223,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051287,GO:0051336,GO:0051346,GO:0051402,GO:0051701,GO:0051702,GO:0051704,GO:0051707,GO:0051709,GO:0051712,GO:0051716,GO:0051817,GO:0051818,GO:0051851,GO:0051852,GO:0051873,GO:0051883,GO:0052040,GO:0052042,GO:0052248,GO:0052330,GO:0052433,GO:0052501,GO:0052547,GO:0052548,GO:0055086,GO:0055114,GO:0060255,GO:0061134,GO:0061135,GO:0061615,GO:0061620,GO:0061621,GO:0061718,GO:0061844,GO:0065007,GO:0065008,GO:0065009,GO:0070201,GO:0070887,GO:0070997,GO:0071310,GO:0071345,GO:0071346,GO:0071704,GO:0071840,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090087,GO:0090407,GO:0097159,GO:0097452,GO:0097718,GO:0098542,GO:0098772,GO:0140096,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1903530,GO:1903532,GO:1904951,GO:1990904,GO:2000112,GO:2000113 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002212 546.0
DYD3_k127_1623536_4 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000003268 237.0
DYD3_k127_1650622_0 ABC transporter transmembrane region K02021 - - 1.243e-276 884.0
DYD3_k127_1650622_1 Oligopeptide/dipeptide transporter, C-terminal region K02031,K02032 - - 7.033e-258 811.0
DYD3_k127_1650622_10 peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003175 406.0
DYD3_k127_1650622_11 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002527 403.0
DYD3_k127_1650622_12 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001306 397.0
DYD3_k127_1650622_13 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities K00842,K14155 - 4.4.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008989 394.0
DYD3_k127_1650622_14 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001463 372.0
DYD3_k127_1650622_15 TIGRFAM phosphonate ABC transporter, periplasmic phosphonate-binding protein K02044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006071 374.0
DYD3_k127_1650622_16 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001517 363.0
DYD3_k127_1650622_17 COG3639 ABC-type phosphate phosphonate transport system permease component K02042 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 345.0
DYD3_k127_1650622_18 COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 347.0
DYD3_k127_1650622_19 Glycosyltransferase family 28 C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007178 342.0
DYD3_k127_1650622_2 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 8.625e-244 772.0
DYD3_k127_1650622_20 Belongs to the HpcH HpaI aldolase family K01644 - 4.1.3.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 333.0
DYD3_k127_1650622_21 Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system K02041 - 3.6.3.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009025 328.0
DYD3_k127_1650622_22 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 321.0
DYD3_k127_1650622_23 Binding-protein-dependent transport system inner membrane component K02042 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003982 304.0
DYD3_k127_1650622_24 glycosyl transferase family 8 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004379 278.0
DYD3_k127_1650622_25 dehydratase K18290 - 4.2.1.56 0.000000000000000000000000000000000000000000000000000000000000000000000000001532 259.0
DYD3_k127_1650622_26 Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol K06134 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002965 250.0
DYD3_k127_1650622_27 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003711 239.0
DYD3_k127_1650622_28 regulator of disulfide bond formation K07397 - - 0.0000000000000000000000000000000000000000000000000000000000000006461 221.0
DYD3_k127_1650622_29 Glycosyl Transferase - - - 0.000000000000000000000000000000000000000000000000000000000000004962 234.0
DYD3_k127_1650622_3 N-terminal TM domain of oligopeptide transport permease C K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001701 610.0
DYD3_k127_1650622_30 Required for insertion of 4Fe-4S clusters K15724 - - 0.000000000000000000000000000000000000000000000000000000000000008711 216.0
DYD3_k127_1650622_31 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.0000000000000000000000000000000000000000000000000000000000001245 214.0
DYD3_k127_1650622_32 ligase activity - - - 0.000000000000000000000000000000000000000000000000000000001571 227.0
DYD3_k127_1650622_33 - - - - 0.0000000000000000000000000000000000000000000000000000291 198.0
DYD3_k127_1650622_34 Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides K07232 - - 0.0000000000000000000000000000000000000000000000003396 184.0
DYD3_k127_1650622_35 Phosphoglycerate mutase family - - - 0.000000000000000000000000000000000000000000000004271 181.0
DYD3_k127_1650622_36 Integral membrane protein CcmA involved in cell shape determination - - - 0.0000000000000000000000000000000000000000000001604 171.0
DYD3_k127_1650622_37 Periplasmic binding protein domain K01999 - - 0.000000000000000000000000000000000000000000001189 181.0
DYD3_k127_1650622_38 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000004942 179.0
DYD3_k127_1650622_39 cyclic nucleotide-binding - - - 0.0000000000000000000000000000000000004484 150.0
DYD3_k127_1650622_4 Glycosyltransferase family 28 C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015 572.0
DYD3_k127_1650622_40 Thioredoxin-like - - - 0.0000000000000000000000000000000000816 140.0
DYD3_k127_1650622_41 ACT domain protein K00003,K00058,K01754,K04767 - 1.1.1.3,1.1.1.399,1.1.1.95,4.3.1.19 0.00000000000000000000000000000001161 134.0
DYD3_k127_1650622_42 - - - - 0.00000000000000000000000002512 122.0
DYD3_k127_1650622_43 Gram-negative porin - - - 0.0000000000000000003373 98.0
DYD3_k127_1650622_5 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 561.0
DYD3_k127_1650622_6 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002007 518.0
DYD3_k127_1650622_7 glycolate oxidase subunit GlcD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009527 524.0
DYD3_k127_1650622_8 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002929 497.0
DYD3_k127_1650622_9 Binding-protein-dependent transport system inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005769 473.0
DYD3_k127_1699895_0 Cys/Met metabolism PLP-dependent enzyme K01740 - 2.5.1.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008954 578.0
DYD3_k127_1699895_1 Alkaline and neutral invertase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 444.0
DYD3_k127_1699895_2 Branched-chain amino acid transport system / permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002093 391.0
DYD3_k127_1699895_3 ATPases associated with a variety of cellular activities K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002224 334.0
DYD3_k127_1699895_4 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000575 302.0
DYD3_k127_1699895_5 Hsp33 protein K04083 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004664 264.0
DYD3_k127_1699895_6 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000002471 119.0
DYD3_k127_1699895_7 Stress-induced protein - - - 0.00000000000000001801 83.0
DYD3_k127_1699895_8 BON domain - - - 0.00006445 51.0
DYD3_k127_1699895_9 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.0007442 43.0
DYD3_k127_171554_0 gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 1.203e-237 746.0
DYD3_k127_171554_1 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 4.335e-225 710.0
DYD3_k127_171554_10 Glutathione S-transferase K00799 GO:0003674,GO:0003824,GO:0004364,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0016491,GO:0016740,GO:0016765,GO:0030611,GO:0042802,GO:0044424,GO:0044444,GO:0044464,GO:0055114 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000359 270.0
DYD3_k127_171554_11 CoA-binding protein K06929 - - 0.000000000000000000000000000000000000000000000000000000000000000002829 229.0
DYD3_k127_171554_12 NIPSNAP - - - 0.0000000000000000000000000000000000000000000006706 168.0
DYD3_k127_171554_13 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000000000000000000000005937 163.0
DYD3_k127_171554_15 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.000000000000000000003207 100.0
DYD3_k127_171554_2 Circularly permuted ATP-grasp type 2 - - - 8.189e-214 686.0
DYD3_k127_171554_3 Cys/Met metabolism PLP-dependent enzyme K01740 - 2.5.1.49 1.146e-209 658.0
DYD3_k127_171554_4 Zinc-binding dehydrogenase K12957,K13953,K19961 - 1.1.1.1,1.1.1.258 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003152 396.0
DYD3_k127_171554_5 aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000155 342.0
DYD3_k127_171554_6 Enoyl-(Acyl carrier protein) reductase K00019 - 1.1.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 333.0
DYD3_k127_171554_7 A predicted alpha-helical domain with a conserved ER motif. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000333 332.0
DYD3_k127_171554_8 20S proteasome, A and B subunits K07395 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002452 287.0
DYD3_k127_171554_9 Transglutaminase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004036 278.0
DYD3_k127_210527_0 Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family K01428 - 3.5.1.5 1.578e-313 966.0
DYD3_k127_210527_1 Amidohydrolase family - - - 1.381e-244 766.0
DYD3_k127_210527_10 2-keto-4-pentenoate hydratase K02554 - 4.2.1.80 0.0000000000000000000000000000000000000000000000000000000004065 213.0
DYD3_k127_210527_11 Belongs to the urease gamma subunit family K01430 - 3.5.1.5 0.00000000000000000000000000000000000000000000000004168 182.0
DYD3_k127_210527_12 Belongs to the urease beta subunit family K01429 - 3.5.1.5 0.000000000000000000000000000000000000000000000102 172.0
DYD3_k127_210527_13 Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly K03187 - - 0.000000000000000000000000000000000000000000003358 179.0
DYD3_k127_210527_14 Glycine zipper 2TM domain - - - 0.0000000000000000000000000000000000000000005969 166.0
DYD3_k127_210527_15 DNA-binding transcription factor activity - - - 0.000000000000000000000000000000000001571 141.0
DYD3_k127_210527_16 Predicted integral membrane protein (DUF2282) - - - 0.000000000000000000000000000001505 123.0
DYD3_k127_210527_2 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001338 386.0
DYD3_k127_210527_3 Glutathione S-transferase K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005987 380.0
DYD3_k127_210527_4 Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG K03189 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 350.0
DYD3_k127_210527_5 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006396 332.0
DYD3_k127_210527_6 Required for maturation of urease via the functional incorporation of the urease nickel metallocenter K03190 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005976 330.0
DYD3_k127_210527_7 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K12972 - 1.1.1.79,1.1.1.81 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002446 321.0
DYD3_k127_210527_8 Required for maturation of urease via the functional incorporation of the urease nickel metallocenter K03188 - - 0.000000000000000000000000000000000000000000000000000000000000000000001872 242.0
DYD3_k127_210527_9 KR domain K13774 - - 0.000000000000000000000000000000000000000000000000000000000000000001275 238.0
DYD3_k127_2148772_0 COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL CutL homologs K03520 - 1.2.5.3 0.0 1026.0
DYD3_k127_2148772_1 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002815 577.0
DYD3_k127_2148772_10 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000000000000000000000000001199 151.0
DYD3_k127_2148772_11 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000007727 132.0
DYD3_k127_2148772_12 BAAT / Acyl-CoA thioester hydrolase C terminal - - - 0.00000000000000000000000000000003429 141.0
DYD3_k127_2148772_13 Amidase K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000003621 103.0
DYD3_k127_2148772_14 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000006071 70.0
DYD3_k127_2148772_2 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000438 571.0
DYD3_k127_2148772_3 Adenylate cyclase K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002241 539.0
DYD3_k127_2148772_4 MlaD protein K02067 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000623 348.0
DYD3_k127_2148772_5 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000000000000000000000000000000000000000000000000000000000001284 241.0
DYD3_k127_2148772_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000013 221.0
DYD3_k127_2148772_7 Endoribonuclease L-PSP K09021 - - 0.0000000000000000000000000000000000000000000000000001235 190.0
DYD3_k127_2148772_8 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000003217 201.0
DYD3_k127_2148772_9 Permease MlaE - - - 0.0000000000000000000000000000000000000000000203 172.0
DYD3_k127_2156882_0 Hydantoinase B/oxoprolinase - - - 1.311e-280 875.0
DYD3_k127_2156882_1 ABC transporter - - - 1.413e-270 841.0
DYD3_k127_2156882_10 KR domain K00065 - 1.1.1.127 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007441 363.0
DYD3_k127_2156882_11 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002397 344.0
DYD3_k127_2156882_12 short-chain dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005309 306.0
DYD3_k127_2156882_13 Adenylate and Guanylate cyclase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000135 261.0
DYD3_k127_2156882_14 Lipid A 3-O-deacylase (PagL) - - - 0.00000000000000000000000000000000000000000000000002113 187.0
DYD3_k127_2156882_15 long-chain fatty acid transport protein - - - 0.000000000000000000000000000000000001245 158.0
DYD3_k127_2156882_16 helix_turn_helix, mercury resistance K08365 - - 0.000000000000000000000000000000000009018 140.0
DYD3_k127_2156882_17 Alkylmercury lyase K00221 - 4.99.1.2 0.000000000000000000000000000000001183 145.0
DYD3_k127_2156882_18 YCII-related domain K09780 - - 0.00000000000000000000000000000009998 126.0
DYD3_k127_2156882_19 polyketide cyclase - - - 0.000000000000000000000000000002824 123.0
DYD3_k127_2156882_2 AMP-binding enzyme C-terminal domain K00666 - - 9.479e-254 792.0
DYD3_k127_2156882_20 - - - - 0.00000000000000000000000000003246 119.0
DYD3_k127_2156882_22 MerT mercuric transport protein K08363 - - 0.000000000000000000001352 102.0
DYD3_k127_2156882_23 - - - - 0.0000000000000000007525 91.0
DYD3_k127_2156882_25 Mercury scavenger that specifically binds to one mercury ion and which passes it to the mercuric reductase (MerA) via the MerT protein K08364 - - 0.0000000004976 68.0
DYD3_k127_2156882_3 Diguanylate cyclase - - - 8.543e-211 696.0
DYD3_k127_2156882_4 Resistance to Hg(2 ) in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg(0) K00520 - 1.16.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002109 612.0
DYD3_k127_2156882_5 Hydantoinase/oxoprolinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005584 561.0
DYD3_k127_2156882_6 Glucose sorbosone K21430 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007219 552.0
DYD3_k127_2156882_7 NAD dependent epimerase/dehydratase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002079 526.0
DYD3_k127_2156882_8 Alanine dehydrogenase/PNT, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 504.0
DYD3_k127_2156882_9 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002087 372.0
DYD3_k127_2163032_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.0 1148.0
DYD3_k127_2163032_1 CHASE2 K01768 - 4.6.1.1 6.425e-274 862.0
DYD3_k127_2163032_10 Enoyl-CoA hydratase/isomerase K15866 - 5.3.3.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002563 312.0
DYD3_k127_2163032_11 xanthine dehydrogenase activity K04109 - 1.3.7.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000159 322.0
DYD3_k127_2163032_12 DSBA-like thioredoxin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008468 259.0
DYD3_k127_2163032_13 carboxylic ester hydrolase activity K01259,K19311 - 3.4.11.5 0.0000000000000000000000000000000000000000000000000000000000004291 229.0
DYD3_k127_2163032_14 2Fe-2S -binding domain protein K03518 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000001311 214.0
DYD3_k127_2163032_15 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB - - - 0.0000009973 51.0
DYD3_k127_2163032_16 LytTr DNA-binding domain - - - 0.000002178 49.0
DYD3_k127_2163032_18 Domain of unknown function (DUF1127) - - - 0.000946 44.0
DYD3_k127_2163032_2 xanthine dehydrogenase activity K04108 - 1.3.7.9 9.599e-274 872.0
DYD3_k127_2163032_3 metabolite transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003082 509.0
DYD3_k127_2163032_4 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003572 383.0
DYD3_k127_2163032_5 SMART beta-lactamase domain protein K01120 - 3.1.4.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002724 376.0
DYD3_k127_2163032_6 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 357.0
DYD3_k127_2163032_7 cyclic nucleotide-binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004557 331.0
DYD3_k127_2163032_8 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002006 329.0
DYD3_k127_2163032_9 (FHA) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007921 311.0
DYD3_k127_217836_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 9.841e-226 714.0
DYD3_k127_217836_1 Belongs to the peptidase M24B family K01262 - 3.4.11.9 2.836e-194 615.0
DYD3_k127_217836_2 Belongs to the GARS family K01945 - 6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001818 608.0
DYD3_k127_217836_3 Coproporphyrinogen III oxidase K00228 - 1.3.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004765 479.0
DYD3_k127_217836_4 Phosphotransferase enzyme family K07102 - 2.7.1.221 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001854 434.0
DYD3_k127_217836_5 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007588 423.0
DYD3_k127_217836_6 Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005008 344.0
DYD3_k127_217836_7 UbiH UbiF VisC COQ6 family K03185 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004299 260.0
DYD3_k127_217836_8 Nucleotidyl transferase K00992 - 2.7.7.99 0.000000000000000000000000000000000000000000000000000000000000000000003781 246.0
DYD3_k127_217836_9 Bacterial regulatory protein, Fis family K03557 - - 0.00000000000000000000000004253 109.0
DYD3_k127_2186460_0 4Fe-4S single cluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002054 582.0
DYD3_k127_2186460_1 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006465 565.0
DYD3_k127_2186460_10 Belongs to the CinA family K03743 - 3.5.1.42 0.00000000000000000000000000000000000000000008574 178.0
DYD3_k127_2186460_11 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.00000000000000000000000000000000000007065 143.0
DYD3_k127_2186460_12 protein conserved in bacteria K09937 - - 0.000000000000000004907 84.0
DYD3_k127_2186460_2 HflC and HflK could encode or regulate a protease K04088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005183 509.0
DYD3_k127_2186460_3 Memo-like protein K06990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000276 437.0
DYD3_k127_2186460_4 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008419 427.0
DYD3_k127_2186460_5 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009944 404.0
DYD3_k127_2186460_6 HflC and HflK could regulate a protease K04087 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009071 394.0
DYD3_k127_2186460_7 PFAM Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002535 386.0
DYD3_k127_2186460_8 Phosphatidylglycerophosphatase A K01095 - 3.1.3.27 0.000000000000000000000000000000000000000000000000001062 194.0
DYD3_k127_2186460_9 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.0000000000000000000000000000000000000000000008478 171.0
DYD3_k127_2309274_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1471.0
DYD3_k127_2309274_1 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 1.133e-291 906.0
DYD3_k127_2309274_10 PFAM cobalamin (vitamin B12) biosynthesis CbiX protein K03795 - 4.99.1.3 0.0000000000000000000000000000000154 130.0
DYD3_k127_2309274_11 Regulatory protein, FmdB family - - - 0.000000000000000000000000004947 114.0
DYD3_k127_2309274_12 (barnase) inhibitor - - - 0.00000000000000000000007093 106.0
DYD3_k127_2309274_13 PFAM ABC transporter K02471 - - 0.00000000000000000001793 92.0
DYD3_k127_2309274_14 NUDIX domain K08310 - 3.6.1.67 0.0000001953 60.0
DYD3_k127_2309274_2 Acetyl-coenzyme A synthetase N-terminus K01907 - 6.2.1.16 3.711e-262 828.0
DYD3_k127_2309274_3 PFAM ABC transporter K02471 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001866 553.0
DYD3_k127_2309274_4 Sugar (and other) transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000597 435.0
DYD3_k127_2309274_5 DNA-binding domain of Proline dehydrogenase K13821 - 1.2.1.88,1.5.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 395.0
DYD3_k127_2309274_6 Protein of unknown function (DUF502) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 291.0
DYD3_k127_2309274_7 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008047,GO:0008150,GO:0008152,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0030234,GO:0031668,GO:0033554,GO:0034641,GO:0042802,GO:0043085,GO:0043170,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050790,GO:0050896,GO:0051716,GO:0065007,GO:0065009,GO:0071496,GO:0071704,GO:0090304,GO:0097159,GO:0098772,GO:1901360,GO:1901363 - 0.000000000000000000000000000000000000000000000000000005232 196.0
DYD3_k127_2309274_8 Phospholipase/Carboxylesterase K06999 - - 0.000000000000000000000000000000000002751 147.0
DYD3_k127_2309274_9 Guanyl-specific ribonuclease Sa K01167 - 3.1.27.3 0.000000000000000000000000000000001618 135.0
DYD3_k127_239121_0 Peptidase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002199 529.0
DYD3_k127_239121_1 Peptidase family M28 K02083 - 3.5.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000372 495.0
DYD3_k127_239121_2 polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004779 366.0
DYD3_k127_239121_3 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02052 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006054 360.0
DYD3_k127_239121_4 Binding-protein-dependent transport system inner membrane component K02054 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000426 346.0
DYD3_k127_239121_5 Bacterial extracellular solute-binding protein K02055 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001975 344.0
DYD3_k127_239121_6 PFAM binding-protein-dependent transport systems inner membrane component K02053 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003601 298.0
DYD3_k127_239121_7 COG1802 Transcriptional regulators - - - 0.00000000000000000000000000000000000000000000000000000008633 209.0
DYD3_k127_239121_8 Polysaccharide deacetylase K00365,K01452 GO:0000003,GO:0000272,GO:0003006,GO:0005575,GO:0005618,GO:0005619,GO:0005623,GO:0005631,GO:0005975,GO:0005976,GO:0006022,GO:0006026,GO:0006030,GO:0006032,GO:0006037,GO:0006039,GO:0006040,GO:0006807,GO:0007049,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009272,GO:0009277,GO:0009653,GO:0009987,GO:0010383,GO:0010927,GO:0016043,GO:0016052,GO:0016998,GO:0017144,GO:0019953,GO:0022402,GO:0022411,GO:0022413,GO:0022414,GO:0022607,GO:0030154,GO:0030312,GO:0030435,GO:0030437,GO:0030476,GO:0031160,GO:0031505,GO:0032502,GO:0032505,GO:0032989,GO:0034218,GO:0034232,GO:0034293,GO:0042244,GO:0042546,GO:0042737,GO:0043170,GO:0043934,GO:0043935,GO:0044036,GO:0044085,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044260,GO:0044262,GO:0044264,GO:0044275,GO:0044277,GO:0044426,GO:0044462,GO:0044464,GO:0044703,GO:0045229,GO:0046348,GO:0048468,GO:0048646,GO:0048856,GO:0048869,GO:0051321,GO:0051704,GO:0070590,GO:0070591,GO:0070726,GO:0070910,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071852,GO:0071853,GO:0071854,GO:0071940,GO:0071944,GO:0071966,GO:1901071,GO:1901072,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575,GO:1903046 1.7.3.3,3.5.1.41 0.000000000000000000000000000000000000000000000001097 188.0
DYD3_k127_239121_9 COG1042 Acyl-CoA synthetase (NDP forming) - - - 0.0000229 48.0
DYD3_k127_2469070_0 elongation factor G K02355 - - 1.93e-290 907.0
DYD3_k127_2469070_1 Fumarate reductase flavoprotein C-term K00239,K00244 - 1.3.5.1,1.3.5.4 8.914e-271 842.0
DYD3_k127_2469070_10 PFAM SMP-30 Gluconolaconase LRE domain protein K01053,K14274 - 3.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004914 484.0
DYD3_k127_2469070_11 Tartrate K01677 - 4.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006167 446.0
DYD3_k127_2469070_12 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002593 445.0
DYD3_k127_2469070_13 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001498 430.0
DYD3_k127_2469070_14 fructose-bisphosphate aldolase K01623 - 4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000151 425.0
DYD3_k127_2469070_15 Xylose isomerase-like TIM barrel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001996 402.0
DYD3_k127_2469070_16 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001991 380.0
DYD3_k127_2469070_17 Tyrosine recombinase XerD K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003094 380.0
DYD3_k127_2469070_18 Belongs to the LDH2 MDH2 oxidoreductase family K13609,K16844 - 1.1.1.338,1.5.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002056 366.0
DYD3_k127_2469070_19 ATPases associated with a variety of cellular activities - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002709 360.0
DYD3_k127_2469070_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 1.221e-268 848.0
DYD3_k127_2469070_20 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002548 352.0
DYD3_k127_2469070_21 ABC-type uncharacterized transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007398 343.0
DYD3_k127_2469070_22 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 - 2.7.7.87 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003839 333.0
DYD3_k127_2469070_23 Fumarase C-terminus K01678,K03780 - 4.2.1.2,4.2.1.32 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008449 323.0
DYD3_k127_2469070_24 NAD-dependent epimerase dehydratase K18981 - 1.1.1.203 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006218 303.0
DYD3_k127_2469070_25 dienelactone hydrolase K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003426 282.0
DYD3_k127_2469070_26 Peptidase family M48 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008481 279.0
DYD3_k127_2469070_27 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001428 280.0
DYD3_k127_2469070_28 DSBA-like thioredoxin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007187 252.0
DYD3_k127_2469070_29 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000001572 240.0
DYD3_k127_2469070_3 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 8.064e-253 800.0
DYD3_k127_2469070_30 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000001009 224.0
DYD3_k127_2469070_31 hydrolase activity, acting on ester bonds - - - 0.000000000000000000000000000000000000000000000000000000000000001175 240.0
DYD3_k127_2469070_32 Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily K03976 - - 0.00000000000000000000000000000000000000000000000000000000000001422 219.0
DYD3_k127_2469070_33 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain - - - 0.000000000000000000000000000000000000000000000000000000001357 205.0
DYD3_k127_2469070_34 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000000000000000000000000000000000000000000000001857 207.0
DYD3_k127_2469070_35 Chalcone isomerase-like - - - 0.0000000000000000000000000000000000000000000000000001115 192.0
DYD3_k127_2469070_36 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567 - 2.1.1.63 0.0000000000000000000000000000000000000000000000000006733 188.0
DYD3_k127_2469070_37 protein conserved in bacteria K09966 - - 0.000000000000000000000000000000000000000000000000006016 184.0
DYD3_k127_2469070_38 YqeY-like protein K09117 - - 0.0000000000000000000000000000000000000000000000005207 184.0
DYD3_k127_2469070_39 Endoribonuclease L-PSP - - - 0.00000000000000000000000000000000000000000000001389 175.0
DYD3_k127_2469070_4 Major facilitator Superfamily K08218 - - 6.46e-242 758.0
DYD3_k127_2469070_40 SAF K16845 - 4.4.1.24 0.00000000000000000000000000000000000000001926 154.0
DYD3_k127_2469070_41 Trap-type c4-dicarboxylate transport system, small permease component - - - 0.000000000000000000000000000000000001449 139.0
DYD3_k127_2469070_42 Succinate dehydrogenase/Fumarate reductase transmembrane subunit - - - 0.00000000000000000000000000000000006934 151.0
DYD3_k127_2469070_43 Tetratricopeptide repeat - - - 0.00000000000000000000000000000002894 130.0
DYD3_k127_2469070_44 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.00000000000000000000000000000003068 126.0
DYD3_k127_2469070_45 succinate dehydrogenase K00246 - - 0.000000000000000000000000000001048 124.0
DYD3_k127_2469070_46 Dihydroneopterin aldolase K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.000000000000000000000000000001748 124.0
DYD3_k127_2469070_47 Domain of unknown function (DUF4340) - - - 0.000000000000000017 95.0
DYD3_k127_2469070_48 Peptidase M50 K16922 - - 0.0000000000000001124 89.0
DYD3_k127_2469070_49 cheY-homologous receiver domain - - - 0.0000000000000001943 91.0
DYD3_k127_2469070_5 COG1593 TRAP-type C4-dicarboxylate transport system large permease component - - - 1.692e-217 686.0
DYD3_k127_2469070_50 Phage integrase family - - - 0.0002197 47.0
DYD3_k127_2469070_6 D-galactarate dehydratase / Altronate hydrolase, C terminus K16846 - 4.4.1.24 6.28e-213 667.0
DYD3_k127_2469070_7 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009649 560.0
DYD3_k127_2469070_8 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001762 524.0
DYD3_k127_2469070_9 PhoD-like phosphatase, N-terminal domain K01113 - 3.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002096 518.0
DYD3_k127_2524070_0 Acyl-CoA dehydrogenase, middle domain K00252 - 1.3.8.6 5.001e-234 727.0
DYD3_k127_2524070_1 Transmembrane secretion effector - - - 9.915e-233 736.0
DYD3_k127_2524070_10 Uncharacterized ACR, COG1678 - - - 0.00000000000000000000000000003124 126.0
DYD3_k127_2524070_11 Pfam SNARE associated Golgi protein - - - 0.00000000000000000000000000007038 121.0
DYD3_k127_2524070_12 Uncharacterized ACR, COG1678 - - - 0.00000000000000000000003602 107.0
DYD3_k127_2524070_2 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 1.704e-208 677.0
DYD3_k127_2524070_3 3-hydroxyacyl-CoA dehydrogenase K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003083 577.0
DYD3_k127_2524070_4 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004409 559.0
DYD3_k127_2524070_5 Acts as a magnesium transporter K06213 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002888 479.0
DYD3_k127_2524070_6 Conserved TM helix - - - 0.00000000000000000000000000000000000000000000000000000000000000000003678 242.0
DYD3_k127_2524070_7 Universal stress protein family - - - 0.000000000000000000000000000000000000000002987 160.0
DYD3_k127_2524070_8 Protein required for attachment to host cells - - - 0.00000000000000000000000000000000002625 140.0
DYD3_k127_2524070_9 SNARE associated Golgi protein - - - 0.000000000000000000000000000005042 121.0
DYD3_k127_2532550_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 1.826e-202 638.0
DYD3_k127_2532550_1 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 5.652e-195 618.0
DYD3_k127_2532550_10 Belongs to the Nudix hydrolase family. NudJ subfamily - - - 0.000000000000000000000000000000000000000000000004549 198.0
DYD3_k127_2532550_11 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000003078 175.0
DYD3_k127_2532550_2 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006453 583.0
DYD3_k127_2532550_3 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 529.0
DYD3_k127_2532550_4 Mediates influx of magnesium ions K03284,K16074 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002927 432.0
DYD3_k127_2532550_5 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001555 411.0
DYD3_k127_2532550_6 PFAM aminotransferase, class I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007682 400.0
DYD3_k127_2532550_7 Uracil DNA glycosylase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002968 276.0
DYD3_k127_2532550_8 Glutathione S-transferase K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000007124 237.0
DYD3_k127_2532550_9 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000002909 234.0
DYD3_k127_2567700_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 6.297e-261 810.0
DYD3_k127_2567700_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 5.587e-196 618.0
DYD3_k127_2567700_2 Lipid A Biosynthesis K02517,K12974 - 2.3.1.241,2.3.1.242 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 344.0
DYD3_k127_2567700_3 Oxidoreductase family, NAD-binding Rossmann fold K09949 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005202 291.0
DYD3_k127_2567700_4 Lipid A Biosynthesis K02517,K12974 - 2.3.1.241,2.3.1.242 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001105 280.0
DYD3_k127_2567700_5 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.00000000000000000000000000000000000000000000000000000000000000000000000005883 273.0
DYD3_k127_2567700_6 Diaminopimelate epimerase K01778 - 5.1.1.7 0.0000000000000000000000000000000000000003891 151.0
DYD3_k127_2568503_0 3-hydroxyacyl-coa dehydrogenase K07516 - 1.1.1.35 2.668e-272 854.0
DYD3_k127_2568503_1 AMP-binding enzyme C-terminal domain K02182,K20034 GO:0003674,GO:0003824,GO:0003996,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009987,GO:0016405,GO:0016874,GO:0016877,GO:0016878,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0044424,GO:0044464,GO:0071704 6.2.1.44,6.2.1.48 3.128e-256 801.0
DYD3_k127_2568503_10 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000431 466.0
DYD3_k127_2568503_11 Periplasmic binding protein domain K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002818 432.0
DYD3_k127_2568503_12 Gamma-glutamyltranspeptidase K00681 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0006082,GO:0006508,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008242,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016787,GO:0019538,GO:0019752,GO:0030288,GO:0030313,GO:0031975,GO:0034722,GO:0036374,GO:0042597,GO:0043094,GO:0043102,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0070011,GO:0071704,GO:0097264,GO:0140096,GO:1901564,GO:1901566,GO:1901576 2.3.2.2,3.4.19.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002277 410.0
DYD3_k127_2568503_13 PFAM ABC transporter related K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003414 351.0
DYD3_k127_2568503_14 ABC transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000324 361.0
DYD3_k127_2568503_15 PFAM oxidoreductase FAD NAD(P)-binding domain protein K00528 - 1.18.1.2,1.19.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 287.0
DYD3_k127_2568503_16 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001306 291.0
DYD3_k127_2568503_17 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001306 291.0
DYD3_k127_2568503_18 Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004549 272.0
DYD3_k127_2568503_19 enoyl-CoA hydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000941 280.0
DYD3_k127_2568503_2 Putative diguanylate phosphodiesterase - - - 1.808e-233 759.0
DYD3_k127_2568503_20 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005099 265.0
DYD3_k127_2568503_21 deoxyhypusine monooxygenase activity K05384,K05386 - - 0.000000000000000000000000000000000000000000000000003303 198.0
DYD3_k127_2568503_22 PFAM MaoC domain protein dehydratase - - - 0.0000000000000000000000000000000000000000000000002109 180.0
DYD3_k127_2568503_23 Tetratricopeptide repeat - - - 0.0000000000000000000000004294 112.0
DYD3_k127_2568503_24 Domain of unknown function (DUF1992) - - - 0.00000000000000000001082 109.0
DYD3_k127_2568503_25 Protein of unknown function (DUF3301) - - - 0.00000000000000000002168 105.0
DYD3_k127_2568503_27 (cell wall) hydrolase, autolysin K01448 - 3.5.1.28 0.000000002186 63.0
DYD3_k127_2568503_3 GMC oxidoreductase K00108 - 1.1.99.1 3.069e-207 657.0
DYD3_k127_2568503_4 PFAM type I phosphodiesterase nucleotide pyrophosphatase K19670 - 3.11.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002754 602.0
DYD3_k127_2568503_5 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004568 593.0
DYD3_k127_2568503_6 PFAM Sulfatase K01130 - 3.1.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003012 571.0
DYD3_k127_2568503_7 Belongs to the binding-protein-dependent transport system permease family K01995,K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002967 535.0
DYD3_k127_2568503_8 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008577 500.0
DYD3_k127_2568503_9 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000842 481.0
DYD3_k127_2807397_0 Tripartite tricarboxylate transporter TctA family - - - 1.172e-224 705.0
DYD3_k127_2807397_1 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003264 411.0
DYD3_k127_2807397_10 GDSL-like Lipase/Acylhydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000003008 223.0
DYD3_k127_2807397_11 oxidation-reduction process - - - 0.00000000000000000000000000000000000000000000000000000000001001 209.0
DYD3_k127_2807397_12 - - - - 0.0000000000000000000000000000000000000000000000000002924 187.0
DYD3_k127_2807397_13 Biopolymer transport protein ExbD TolR K03559 - - 0.000000000000000000000000000000000000000000007075 166.0
DYD3_k127_2807397_14 ACT domain protein K00003,K00058,K01754,K04767 - 1.1.1.3,1.1.1.399,1.1.1.95,4.3.1.19 0.0000000000000000000000000000000005595 135.0
DYD3_k127_2807397_15 Tripartite tricarboxylate transporter TctB family - - - 0.00000000000000000000000000000002014 132.0
DYD3_k127_2807397_16 protein conserved in bacteria K09931 - - 0.0000000000000000000000000000003174 126.0
DYD3_k127_2807397_17 Belongs to the UPF0434 family K09791 - - 0.00000000000002088 75.0
DYD3_k127_2807397_2 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007652 368.0
DYD3_k127_2807397_3 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002692 334.0
DYD3_k127_2807397_4 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002286 310.0
DYD3_k127_2807397_5 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003081 319.0
DYD3_k127_2807397_6 haloacid dehalogenase K01560 - 3.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004756 305.0
DYD3_k127_2807397_7 MotA/TolQ/ExbB proton channel family K03561 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002695 285.0
DYD3_k127_2807397_8 Domain of Unknown Function (DUF1080) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003882 255.0
DYD3_k127_2807397_9 Cobalamin adenosyltransferase K00798 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005525,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016043,GO:0016740,GO:0016765,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019003,GO:0019438,GO:0019538,GO:0022607,GO:0030091,GO:0030554,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0033013,GO:0033014,GO:0034641,GO:0035639,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0065003,GO:0070206,GO:0070207,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.5.1.17 0.0000000000000000000000000000000000000000000000000000000000000005205 246.0
DYD3_k127_285015_0 NADPH quinone oxidoreductase K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001972 456.0
DYD3_k127_285015_1 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001506 428.0
DYD3_k127_285015_2 Belongs to the enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 401.0
DYD3_k127_285015_3 Alpha beta hydrolase K01563 - 3.8.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009353 386.0
DYD3_k127_285015_4 7TM diverse intracellular signalling - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 382.0
DYD3_k127_285015_5 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000539 302.0
DYD3_k127_285015_6 MOSC domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001117 269.0
DYD3_k127_285015_7 EamA-like transporter family - - - 0.0004623 46.0
DYD3_k127_2875723_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 1.302e-206 651.0
DYD3_k127_2875723_1 Cobalamin synthesis protein cobW C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000402 460.0
DYD3_k127_2875723_10 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.0000000000000002905 79.0
DYD3_k127_2875723_11 Transmembrane anti-sigma factor - - - 0.00000000009533 64.0
DYD3_k127_2875723_12 Cysteine-rich CWC - - - 0.000778 46.0
DYD3_k127_2875723_2 SMART PUA domain containing protein K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005218 473.0
DYD3_k127_2875723_3 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004269 332.0
DYD3_k127_2875723_4 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002748 285.0
DYD3_k127_2875723_5 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001732 278.0
DYD3_k127_2875723_6 Protein of unknown function, DUF484 K09921 - - 0.0000000000000000000000000000000000000000000000000000000000000001825 228.0
DYD3_k127_2875723_7 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000006532 199.0
DYD3_k127_2875723_8 Belongs to the anti-sigma-factor antagonist family - - - 0.0000000000000000000000000000000000000000000000004728 192.0
DYD3_k127_2875723_9 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000000000000000004913 164.0
DYD3_k127_2944191_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 0.0 1021.0
DYD3_k127_2944191_1 Chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB K04044 GO:0000166,GO:0000988,GO:0000989,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008144,GO:0008150,GO:0008270,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010033,GO:0010556,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0016989,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0022607,GO:0030554,GO:0031323,GO:0031326,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034620,GO:0035639,GO:0035966,GO:0035967,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043531,GO:0043933,GO:0044085,GO:0044183,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0061077,GO:0065003,GO:0065007,GO:0070887,GO:0071310,GO:0071840,GO:0080090,GO:0097159,GO:0097367,GO:0140110,GO:1901265,GO:1901363,GO:1903506,GO:2001141 - 1.819e-285 887.0
DYD3_k127_2944191_10 Oligopeptide/dipeptide transporter, C-terminal region K02031 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002256 492.0
DYD3_k127_2944191_11 Binding-protein-dependent transport system inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003198 441.0
DYD3_k127_2944191_12 COG1173 ABC-type dipeptide oligopeptide nickel transport systems permease components K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000793 412.0
DYD3_k127_2944191_13 Belongs to the mandelate racemase muconate lactonizing enzyme family K01684 - 4.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007145 392.0
DYD3_k127_2944191_14 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008167 354.0
DYD3_k127_2944191_15 serine acetyltransferase K00640 - 2.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003653 306.0
DYD3_k127_2944191_16 PFAM secretion protein HlyD family protein K03543 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 312.0
DYD3_k127_2944191_17 TatD related DNase K03424 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002598 321.0
DYD3_k127_2944191_18 HD domain K07814 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 297.0
DYD3_k127_2944191_19 N-formylglutamate amidohydrolase K01458 - 3.5.1.68 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003248 283.0
DYD3_k127_2944191_2 ABC-type dipeptide transport system periplasmic component K02035 - - 1.078e-225 710.0
DYD3_k127_2944191_20 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007447 244.0
DYD3_k127_2944191_21 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488 - - 0.000000000000000000000000000000000000000000000000000000000000000003768 235.0
DYD3_k127_2944191_22 Rrf2 family transcriptional regulator, iron-sulfur cluster assembly K13643 - - 0.000000000000000000000000000000000000000000000000000000000000000006124 228.0
DYD3_k127_2944191_23 Succinylglutamate desuccinylase - - - 0.00000000000000000000000000000000000000000000000000000000000000001377 233.0
DYD3_k127_2944191_24 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533 - - 0.0000000000000000000000000000000000000000000000000000000001258 218.0
DYD3_k127_2944191_25 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000119 203.0
DYD3_k127_2944191_26 Belongs to the HesB IscA family K13628 - - 0.00000000000000000000000000000000000000000000000000001338 189.0
DYD3_k127_2944191_27 Ferredoxin, 2Fe-2S type, ISC system K04755 - - 0.0000000000000000000000000000000000000000000000001616 179.0
DYD3_k127_2944191_28 Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA K04082 - - 0.000000000000000000000000000000000000000000000001437 183.0
DYD3_k127_2944191_29 helix_turn_helix multiple antibiotic resistance protein - - - 0.000000000000000000000000000000000000000000002383 173.0
DYD3_k127_2944191_3 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 5.722e-213 666.0
DYD3_k127_2944191_30 Fe-S assembly protein IscX - - - 0.00000000000000000000000003385 108.0
DYD3_k127_2944191_31 Protein of unknown function (DUF2917) - - - 0.00007233 49.0
DYD3_k127_2944191_4 Rieske-like [2Fe-2S] domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000381 601.0
DYD3_k127_2944191_5 Major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005863 577.0
DYD3_k127_2944191_6 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003164 556.0
DYD3_k127_2944191_7 helix_turn_helix gluconate operon transcriptional repressor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002876 531.0
DYD3_k127_2944191_8 MlrC C-terminus - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002005 513.0
DYD3_k127_2944191_9 Oligopeptide/dipeptide transporter, C-terminal region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002649 491.0
DYD3_k127_2953443_0 Cobalamin-independent synthase, Catalytic domain K00549,K22363 - 2.1.1.14,4.4.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007891 581.0
DYD3_k127_2953443_1 PFAM Hydantoinase oxoprolinase K01473 - 3.5.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 500.0
DYD3_k127_2953443_10 MAPEG family - - - 0.000000108 61.0
DYD3_k127_2953443_2 Hydantoinase B/oxoprolinase K01474 - 3.5.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008605 512.0
DYD3_k127_2953443_3 ABC transporter K01990 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0009314,GO:0009628,GO:0010165,GO:0010212,GO:0016020,GO:0044464,GO:0050896,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005723 457.0
DYD3_k127_2953443_4 transport, permease protein K01992 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 396.0
DYD3_k127_2953443_5 Dehydrogenase K03519 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003222 276.0
DYD3_k127_2953443_6 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006725 278.0
DYD3_k127_2953443_7 2Fe-2S -binding domain protein K03518 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000004945 223.0
DYD3_k127_2953443_8 NAD(P)H-binding - - - 0.000000000000000000000000000000000007997 139.0
DYD3_k127_2953443_9 MAPEG family - - - 0.0000000000000000000000000000000004973 132.0
DYD3_k127_2977103_0 Aldehyde oxidase and xanthine dehydrogenase a b hammerhead K03520,K11177 - 1.17.1.4,1.2.5.3 0.0 1134.0
DYD3_k127_2977103_1 AAA domain (dynein-related subfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006528 331.0
DYD3_k127_2977103_2 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007011 308.0
DYD3_k127_2977103_3 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K07141,K19190 - 1.1.1.328,2.7.7.76 0.0000000000000000000000000000000000000000000000000000000000000000000000001559 252.0
DYD3_k127_2977103_4 2Fe-2S -binding domain protein K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000003887 244.0
DYD3_k127_2977103_5 VWA domain containing CoxE-like protein K07161 - - 0.00000000000000000000000000000000000000000000000000000000000002454 228.0
DYD3_k127_2977103_6 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.000000000000000000000000001201 114.0
DYD3_k127_2977103_7 - - - - 0.00000000000000000001201 98.0
DYD3_k127_3021790_0 Adenylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001178 565.0
DYD3_k127_3021790_1 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002147 484.0
DYD3_k127_3021790_2 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008294 402.0
DYD3_k127_3021790_3 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009221 340.0
DYD3_k127_3021790_4 Cupin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000005438 226.0
DYD3_k127_3021790_5 Glutathione-dependent formaldehyde-activating - - - 0.000000000000000000000000000000000000000000000000000000001497 205.0
DYD3_k127_3021790_6 Periplasmic binding protein domain - - - 0.00000000000000000000000000000000000000000000000000000001753 206.0
DYD3_k127_3021790_7 PFAM Hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000000000000000005371 156.0
DYD3_k127_3035947_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 6.238e-200 631.0
DYD3_k127_3035947_1 Histidine Phosphotransfer domain K10715 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009906 565.0
DYD3_k127_3035947_2 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004179 540.0
DYD3_k127_3035947_3 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008211 411.0
DYD3_k127_3035947_4 HD domain K13815 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002497 405.0
DYD3_k127_3035947_5 Pfam Enoyl-CoA hydratase isomerase K13816 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 337.0
DYD3_k127_3035947_6 Iron-containing redox enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000006049 241.0
DYD3_k127_3035947_7 Deoxynucleoside kinase - - - 0.0000000000000000000000000000000000000000000002599 169.0
DYD3_k127_3035947_8 preprotein translocase subunit YajC K03210 - - 0.000000000000000000000000000000000000001045 150.0
DYD3_k127_3085689_0 PFAM cell divisionFtsK SpoIIIE K03466 - - 7.13e-312 972.0
DYD3_k127_3085689_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 1.18e-247 786.0
DYD3_k127_3085689_10 Bacterial extracellular solute-binding protein K02012 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001547 433.0
DYD3_k127_3085689_11 Nad-dependent epimerase dehydratase K22025 - 1.1.1.410 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007404 361.0
DYD3_k127_3085689_12 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 352.0
DYD3_k127_3085689_13 PFAM Short-chain dehydrogenase reductase SDR K00059 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0010130,GO:0016043,GO:0016491,GO:0016614,GO:0016616,GO:0018913,GO:0018915,GO:0022607,GO:0042537,GO:0043933,GO:0044085,GO:0044237,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000438 338.0
DYD3_k127_3085689_14 Transcriptional regulator crp fnr family K10914 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005751 249.0
DYD3_k127_3085689_15 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000004761 210.0
DYD3_k127_3085689_16 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.000000000000000000000000000000000000000000000000000000005471 205.0
DYD3_k127_3085689_17 Belongs to the P(II) protein family K04751 - - 0.000000000000000000000000000000000000000000000000000001012 197.0
DYD3_k127_3085689_18 Bacterial type II and III secretion system protein - - - 0.00000000000000000000000000000000000000000000000000002063 199.0
DYD3_k127_3085689_19 Small MutS-related domain - - - 0.0000000000000000000000000000000000000000000006143 175.0
DYD3_k127_3085689_2 HELICc2 K03722 - 3.6.4.12 5.308e-243 768.0
DYD3_k127_3085689_20 NlpC/P60 family K13695,K19303 - - 0.00000000000000000000000000000000000001219 150.0
DYD3_k127_3085689_21 Domain of unknown function (DUF4156) - - - 0.000000000000000006414 87.0
DYD3_k127_3085689_22 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.0000000000000003502 89.0
DYD3_k127_3085689_3 belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 4.902e-207 665.0
DYD3_k127_3085689_4 MgsA AAA+ ATPase C terminal K07478 - - 2.562e-200 634.0
DYD3_k127_3085689_5 transporter K02011 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 599.0
DYD3_k127_3085689_6 Belongs to the ABC transporter superfamily K02010 - 3.6.3.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 520.0
DYD3_k127_3085689_7 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003312 512.0
DYD3_k127_3085689_8 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002455 504.0
DYD3_k127_3085689_9 Peptidogalycan biosysnthesis/recognition K09919 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003657 445.0
DYD3_k127_3227374_0 COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases K01908 - 6.2.1.17 9.921e-301 932.0
DYD3_k127_3227374_1 Dehydrogenase K00382 GO:0003674,GO:0003824,GO:0004148,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006139,GO:0006163,GO:0006164,GO:0006464,GO:0006637,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0018130,GO:0018335,GO:0019362,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0031974,GO:0031981,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043543,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045254,GO:0046390,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061732,GO:0070013,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0072524,GO:0090407,GO:0106077,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990204,GO:1990234 1.8.1.4 6.578e-203 641.0
DYD3_k127_3227374_10 PFAM Cupin 2 conserved barrel domain protein K21700 - - 0.00000000000000000000000000000000005321 136.0
DYD3_k127_3227374_2 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004494 561.0
DYD3_k127_3227374_3 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002929 497.0
DYD3_k127_3227374_4 PFAM AFG1-family ATPase K06916 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001831 461.0
DYD3_k127_3227374_5 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00001 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004242 440.0
DYD3_k127_3227374_6 Pyruvate carboxyltransferase K01640 - 4.1.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 397.0
DYD3_k127_3227374_7 Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000403 383.0
DYD3_k127_3227374_8 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004654 327.0
DYD3_k127_3227374_9 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000000000000000000007038 225.0
DYD3_k127_3266745_0 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01969 - 6.4.1.4 6.692e-276 859.0
DYD3_k127_3266745_1 Acetyl propionyl-CoA carboxylase, alpha subunit K01968 - 6.4.1.4 5.929e-249 786.0
DYD3_k127_3266745_10 Thioesterase superfamily - - - 0.00000000000000000000000000000000000000000000003201 175.0
DYD3_k127_3266745_11 OsmC-like protein - - - 0.000000000000000000000000000000000000000002248 164.0
DYD3_k127_3266745_12 helix_turn_helix, mercury resistance - - - 0.00000000000000000000000000000000000002675 147.0
DYD3_k127_3266745_13 thiolester hydrolase activity K02614 - - 0.0000000000002577 76.0
DYD3_k127_3266745_14 Protein of unknown function (DUF1289) K06938 - - 0.00000000001028 74.0
DYD3_k127_3266745_2 COG1960 Acyl-CoA dehydrogenases K00253 - 1.3.8.4 4.781e-203 637.0
DYD3_k127_3266745_3 Belongs to the thiolase family K00626 - 2.3.1.9 6.672e-196 618.0
DYD3_k127_3266745_4 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007643 502.0
DYD3_k127_3266745_5 HMGL-like K01640 - 4.1.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008438 447.0
DYD3_k127_3266745_6 enoyl-CoA hydratase K13766,K15312 - 4.2.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001869 299.0
DYD3_k127_3266745_7 2-hydroxychromene-2-carboxylate isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000003681 240.0
DYD3_k127_3266745_8 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000000005713 182.0
DYD3_k127_3266745_9 Belongs to the enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.000000000000000000000000000000000000000000000000468 177.0
DYD3_k127_3298490_0 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 2.603e-205 654.0
DYD3_k127_3298490_1 Phosphoglucomutase K15778 - 5.4.2.2,5.4.2.8 3.006e-202 649.0
DYD3_k127_3298490_10 SnoaL-like domain - - - 0.00000000000000000000000000000000000002918 147.0
DYD3_k127_3298490_11 Zinc-finger domain - - - 0.0000000000000000000352 98.0
DYD3_k127_3298490_2 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003604 484.0
DYD3_k127_3298490_3 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004084 434.0
DYD3_k127_3298490_4 Alpha beta hydrolase K07019 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005364 382.0
DYD3_k127_3298490_5 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002532 336.0
DYD3_k127_3298490_6 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009086 300.0
DYD3_k127_3298490_7 PFAM ATP-binding region ATPase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001245 285.0
DYD3_k127_3298490_8 PFAM response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000001589 204.0
DYD3_k127_3298490_9 acetyltransferase K00661 - 2.3.1.79 0.00000000000000000000000000000000000000000000000000127 189.0
DYD3_k127_3308417_0 succinate dehydrogenase fumarate reductase, flavoprotein subunit K00394 - 1.8.99.2 0.0 1044.0
DYD3_k127_3308417_1 Belongs to the sulfate adenylyltransferase family K00958 - 2.7.7.4 5.936e-197 619.0
DYD3_k127_3308417_10 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000158 288.0
DYD3_k127_3308417_11 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001272 262.0
DYD3_k127_3308417_12 PFAM transport-associated - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002122 263.0
DYD3_k127_3308417_13 reductase, beta subunit K00395 - 1.8.99.2 0.0000000000000000000000000000000000000000000000000000000000000000001212 233.0
DYD3_k127_3308417_14 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.00000000000000000000000000000000000000000000000000000000000003446 219.0
DYD3_k127_3308417_15 geranylgeranyl reductase - - - 0.00000000000000000000000000000000000000000000000000000000005185 222.0
DYD3_k127_3308417_16 Chromate resistance - - - 0.00000000000000000000000000000000000000000000000000000000008887 216.0
DYD3_k127_3308417_17 Cytochrome c K17223 - - 0.0000000000000000000000000000000000000000000000000000005873 202.0
DYD3_k127_3308417_18 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.00000000000000000000000000000000000000000000000000001107 196.0
DYD3_k127_3308417_19 sulfur oxidation protein SoxY K17226 - - 0.00000000000000000000000000000000000000000000003284 175.0
DYD3_k127_3308417_2 Glutathione S-transferase, C-terminal domain K07393 GO:0003674,GO:0003824,GO:0004364,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0016491,GO:0016667,GO:0016672,GO:0016740,GO:0016765,GO:0042221,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.8.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 512.0
DYD3_k127_3308417_20 Belongs to the 5'-nucleotidase family K11751,K17224 - 3.1.3.5,3.6.1.45 0.0000000000000000000000000000000000000000007695 160.0
DYD3_k127_3308417_21 Sulfurtransferase TusA K04085 - - 0.000000000000000000000000000000005592 128.0
DYD3_k127_3308417_22 Sulphur oxidation protein SoxZ K17227 - - 0.000000000000000000000000000001103 125.0
DYD3_k127_3308417_23 phosphoserine phosphatase homoserine phosphotransferase bifunctional protein K02203 - 2.7.1.39,3.1.3.3 0.00000000004075 66.0
DYD3_k127_3308417_24 - - - - 0.00000002656 59.0
DYD3_k127_3308417_3 Radical SAM K09711 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004009 505.0
DYD3_k127_3308417_4 COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related deacylases K06016 - 3.5.1.6,3.5.1.87 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008601 488.0
DYD3_k127_3308417_5 peptidase m48, ste24p - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 444.0
DYD3_k127_3308417_6 Cytochrome c peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004352 395.0
DYD3_k127_3308417_7 Sarcosine oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003029 375.0
DYD3_k127_3308417_8 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002039 331.0
DYD3_k127_3308417_9 Thiosulfate-oxidizing multienzyme system protein SoxA K17222 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001884 316.0
DYD3_k127_3320248_0 COGs COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL CutL homologs K03520,K11177 - 1.17.1.4,1.2.5.3 2.394e-198 621.0
DYD3_k127_3320248_1 Putative cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002297 538.0
DYD3_k127_3320248_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001595 415.0
DYD3_k127_3320248_3 PFAM peptidase M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009128 343.0
DYD3_k127_3320248_4 von Willebrand factor (vWF) type A domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004533 257.0
DYD3_k127_3343989_0 CHASE2 K01768 - 4.6.1.1 3.273e-208 663.0
DYD3_k127_3343989_1 Bacterial transcriptional activator domain - - - 4.081e-203 671.0
DYD3_k127_3343989_2 Conserved repeat domain K12287 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 434.0
DYD3_k127_3343989_3 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001625 286.0
DYD3_k127_3343989_4 Methylenetetrahydrofolate reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000897 276.0
DYD3_k127_3343989_5 serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000007306 279.0
DYD3_k127_3343989_6 Concanavalin A-like lectin/glucanases superfamily K12287 - - 0.000000000000000000000000000000000000000000000000000000001802 211.0
DYD3_k127_3343989_7 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000005318 160.0
DYD3_k127_3343989_8 Bacterial SH3 domain - - - 0.0000000000000000000000000001502 121.0
DYD3_k127_3343989_9 - - - - 0.000000000000000000001903 101.0
DYD3_k127_3403223_0 FAD dependent oxidoreductase K00244 - 1.3.5.4 5.792e-227 712.0
DYD3_k127_3403223_1 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K15509 - 1.1.1.308 9.916e-203 640.0
DYD3_k127_3403223_10 Alcohol dehydrogenase GroES-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001711 306.0
DYD3_k127_3403223_11 Patatin-like phospholipase K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003114 303.0
DYD3_k127_3403223_12 Thiosulfate-oxidizing multienzyme system protein SoxA K17222 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002182 275.0
DYD3_k127_3403223_13 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000007249 267.0
DYD3_k127_3403223_14 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00046,K00065 - 1.1.1.127,1.1.1.69 0.0000000000000000000000000000000000000000000000000000000000000000000000000002148 266.0
DYD3_k127_3403223_15 SMART cyclic nucleotide-binding K10914 - - 0.000000000000000000000000000000000000000000000000000000000003515 222.0
DYD3_k127_3403223_16 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000000000000000003061 218.0
DYD3_k127_3403223_17 Cytochrome c K17223 - - 0.0000000000000000000000000000000000000000000000000000000002264 209.0
DYD3_k127_3403223_18 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000001242 169.0
DYD3_k127_3403223_19 Sel1 domain protein repeat-containing protein K07126 - - 0.000000000000000000000000000000000000003295 153.0
DYD3_k127_3403223_2 Adenylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 610.0
DYD3_k127_3403223_20 Domain of unknown function (DUF1330) - - - 0.00000000000000000000000000004257 119.0
DYD3_k127_3403223_21 Domain of unknown function (DUF1330) - - - 0.00000000000000000000000000007991 118.0
DYD3_k127_3403223_22 - - - - 0.00000000000000007587 88.0
DYD3_k127_3403223_23 PFAM peptidase U32 K08303 - - 0.000000000005629 73.0
DYD3_k127_3403223_3 FAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009437 592.0
DYD3_k127_3403223_4 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001715 496.0
DYD3_k127_3403223_5 Dihydrodipicolinate synthetase family K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001751 466.0
DYD3_k127_3403223_6 dehydrogenase K13775 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008729 457.0
DYD3_k127_3403223_7 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004268 444.0
DYD3_k127_3403223_8 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003125 430.0
DYD3_k127_3403223_9 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002039 371.0
DYD3_k127_3436065_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 4.124e-273 847.0
DYD3_k127_3436065_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 2.013e-260 807.0
DYD3_k127_3436065_10 Transcriptional regulatory protein, C terminal K02483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 312.0
DYD3_k127_3436065_11 PFAM Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000007314 277.0
DYD3_k127_3436065_12 membrane transporter protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001295 267.0
DYD3_k127_3436065_13 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.00000000000000000000000000000000000000000000000000000000009795 210.0
DYD3_k127_3436065_14 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.00000000000000000000000000000000000000000000000002405 183.0
DYD3_k127_3436065_15 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.000000000000000000000000000000000000000000000003292 186.0
DYD3_k127_3436065_16 PFAM peptidase C60, sortase A and B K07284 - 3.4.22.70 0.0000000000000000000000000000000000000000001588 168.0
DYD3_k127_3436065_17 Binding-protein-dependent transport system inner membrane component - - - 0.00000000000000000000000000000000000000001944 153.0
DYD3_k127_3436065_18 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.0000000000000000000000000000000000000008819 153.0
DYD3_k127_3436065_19 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.000000000000000000000000000000000000005198 147.0
DYD3_k127_3436065_2 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00111 - 1.1.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008664 538.0
DYD3_k127_3436065_20 ATP synthase I chain K02116 - - 0.00000000000000000002939 100.0
DYD3_k127_3436065_21 Histidine kinase - - - 0.000000001009 71.0
DYD3_k127_3436065_3 L-carnitine dehydratase bile acid-inducible protein F - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006457 530.0
DYD3_k127_3436065_4 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000503 438.0
DYD3_k127_3436065_5 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003955 432.0
DYD3_k127_3436065_6 Histidine kinase K07641 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009177 386.0
DYD3_k127_3436065_7 Cobyrinic acid ac-diamide synthase K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002723 373.0
DYD3_k127_3436065_8 Belongs to the ParB family K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005144 335.0
DYD3_k127_3436065_9 haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002966 328.0
DYD3_k127_3439075_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 1.481e-221 698.0
DYD3_k127_3439075_1 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 1.421e-210 673.0
DYD3_k127_3439075_10 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005166 342.0
DYD3_k127_3439075_11 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002279 285.0
DYD3_k127_3439075_12 Methionine biosynthesis protein MetW - - - 0.000000000000000000000000000000000000000000000000000000000000000000002523 258.0
DYD3_k127_3439075_13 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000000000000000000000000192 238.0
DYD3_k127_3439075_14 PFAM PTS system fructose subfamily IIA component K02821 - 2.7.1.194 0.000000000000000000000000000000000000000000003443 167.0
DYD3_k127_3439075_15 Macrocin-O-methyltransferase (TylF) K05303 - - 0.00000000000000000000000000000000000006089 154.0
DYD3_k127_3439075_16 Glu-tRNAGln amidotransferase C subunit - - - 0.000000000000000000000000000000197 126.0
DYD3_k127_3439075_17 Phosphotransferase System K11189 - - 0.00000000000000000000000000000522 121.0
DYD3_k127_3439075_18 Protein of unknown function (DUF2905) - - - 0.00000000000000000000000007692 109.0
DYD3_k127_3439075_19 - - - - 0.00000000000000004155 92.0
DYD3_k127_3439075_2 Rod shape-determining protein MreB K03569 - - 3.582e-203 635.0
DYD3_k127_3439075_20 Involved in formation and maintenance of cell shape K03570 - - 0.0000000000000001447 85.0
DYD3_k127_3439075_21 - - - - 0.000000000000007001 84.0
DYD3_k127_3439075_22 Recombinase zinc beta ribbon domain - - - 0.000000812 53.0
DYD3_k127_3439075_3 Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine K00641 - 2.3.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 553.0
DYD3_k127_3439075_4 Acetyl-coenzyme A transporter 1 K08218 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003554 508.0
DYD3_k127_3439075_5 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005922 499.0
DYD3_k127_3439075_6 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 408.0
DYD3_k127_3439075_7 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 394.0
DYD3_k127_3439075_8 Exodeoxyribonuclease III xth K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003839 376.0
DYD3_k127_3439075_9 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001671 369.0
DYD3_k127_3442609_0 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 424.0
DYD3_k127_3442609_1 Protein of unknown function (DUF2817) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 407.0
DYD3_k127_3442609_10 Transcriptional regulator K05800 - - 0.0000000000000000000000000000000000000000000000000000000000000000009227 231.0
DYD3_k127_3442609_11 ABC transporter substrate binding protein K01989 - - 0.0000000000000000000000000000000000000000001008 171.0
DYD3_k127_3442609_12 Dienelactone hydrolase family - - - 0.000000000000000000000000000000000008589 147.0
DYD3_k127_3442609_13 - - - - 0.00000000000000000003473 93.0
DYD3_k127_3442609_14 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 0.000000000004866 66.0
DYD3_k127_3442609_15 Phospholipid methyltransferase - - - 0.00000003135 55.0
DYD3_k127_3442609_16 Belongs to the GcvT family - - - 0.000001059 58.0
DYD3_k127_3442609_2 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006696 372.0
DYD3_k127_3442609_3 KR domain K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002293 365.0
DYD3_k127_3442609_4 NAD-dependent epimerase dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 345.0
DYD3_k127_3442609_5 COG0411 ABC-type branched-chain amino acid transport systems, ATPase component K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002748 336.0
DYD3_k127_3442609_6 ABC transporter K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004126 334.0
DYD3_k127_3442609_7 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005644 340.0
DYD3_k127_3442609_8 Branched-chain amino acid transport system / permease component K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004016 329.0
DYD3_k127_3442609_9 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002528 270.0
DYD3_k127_3445282_0 Belongs to the amidase family K01426,K02433 - 3.5.1.4,6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004909 605.0
DYD3_k127_3445282_1 Belongs to the peptidase M17 family K01255 - 3.4.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003149 580.0
DYD3_k127_3445282_10 PFAM L-carnitine dehydratase bile acid-inducible protein F K01796 - 5.1.99.4 0.00000000000002088 75.0
DYD3_k127_3445282_2 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 421.0
DYD3_k127_3445282_3 ABC transporter substrate-binding protein K02016 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002883 372.0
DYD3_k127_3445282_4 Ornithine cyclodeaminase/mu-crystallin family K01750,K19244,K19743 - 1.4.1.1,1.5.1.1,4.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 353.0
DYD3_k127_3445282_5 mechanosensitive ion channel K22044 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003443 339.0
DYD3_k127_3445282_6 Metallo-beta-lactamase superfamily K06897 - 2.5.1.105 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004937 331.0
DYD3_k127_3445282_7 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 313.0
DYD3_k127_3445282_8 short-chain dehydrogenase reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001985 287.0
DYD3_k127_3445282_9 FR47-like protein - - - 0.0000000000000000000000000000000000000000000000000006307 186.0
DYD3_k127_3448238_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 5.189e-304 951.0
DYD3_k127_3448238_1 Belongs to the heme-copper respiratory oxidase family K00404 - 1.9.3.1 8.424e-268 830.0
DYD3_k127_3448238_10 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K01420 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001769 308.0
DYD3_k127_3448238_11 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008541 288.0
DYD3_k127_3448238_12 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000121 282.0
DYD3_k127_3448238_13 Putative metal-binding domain of cation transport ATPase K01533 - 3.6.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000005565 262.0
DYD3_k127_3448238_14 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.0000000000000000000000000000000000000000000000000000000000000000001587 236.0
DYD3_k127_3448238_15 Bacterial regulatory proteins, luxR family - - - 0.00000000000000000000000000000000000000000000000000000000000000001637 236.0
DYD3_k127_3448238_16 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000001256 231.0
DYD3_k127_3448238_17 Prokaryotic cytochrome b561 - - - 0.00000000000000000000000000000000000000000000000000000002669 221.0
DYD3_k127_3448238_18 Carboxymuconolactone decarboxylase family - - - 0.00000000000000000000000000000000000000000000000000003981 196.0
DYD3_k127_3448238_19 FixH family K09926 - - 0.00000000000000000000000000000000001072 142.0
DYD3_k127_3448238_2 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 1.511e-235 739.0
DYD3_k127_3448238_20 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000001344 141.0
DYD3_k127_3448238_21 Protein of unknown function (DUF1622) - - - 0.00000000000000000000003254 103.0
DYD3_k127_3448238_22 - - - - 0.000000000000000000002179 95.0
DYD3_k127_3448238_23 Protein of unknown function (DUF2933) - - - 0.000000000000005467 81.0
DYD3_k127_3448238_24 P pilus assembly Cpx signaling pathway, periplasmic inhibitor zinc-resistance associated protein K06006 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006457,GO:0008150,GO:0009987,GO:0010033,GO:0014070,GO:0030288,GO:0030313,GO:0031975,GO:0042221,GO:0042597,GO:0044464,GO:0050896,GO:0051082,GO:0061077,GO:1990507 - 0.00000000000002309 81.0
DYD3_k127_3448238_25 Response regulator receiver - - - 0.0000000000001259 78.0
DYD3_k127_3448238_26 alcohol dehydrogenase K13953 - 1.1.1.1 0.00000000001504 66.0
DYD3_k127_3448238_27 Cytochrome oxidase maturation protein cbb3-type - - - 0.000000009502 60.0
DYD3_k127_3448238_28 COG4736 Cbb3-type cytochrome oxidase, subunit 3 K00407 - - 0.0000000162 64.0
DYD3_k127_3448238_3 iron-sulfur 4fe-4s ferredoxin transmembrane protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001724 612.0
DYD3_k127_3448238_30 PFAM Alcohol dehydrogenase K13953 - 1.1.1.1 0.00004346 49.0
DYD3_k127_3448238_31 Cytochrome c - - - 0.00009527 48.0
DYD3_k127_3448238_4 40-residue YVTN family beta-propeller repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002395 395.0
DYD3_k127_3448238_5 Possible lysine decarboxylase K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005884 368.0
DYD3_k127_3448238_6 C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex K00406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001762 359.0
DYD3_k127_3448238_7 Methyl-transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009502 336.0
DYD3_k127_3448238_8 Cytochrome C oxidase, mono-heme subunit/FixO K00405 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001347 331.0
DYD3_k127_3448238_9 histidine kinase, dimerisation and phosphoacceptor region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000442 318.0
DYD3_k127_3463149_0 Protein involved in ribonuclease activity and hydrolase activity K01147 - 3.1.13.1 1.153e-207 663.0
DYD3_k127_3463149_1 Mur ligase family, catalytic domain K02558 - 6.3.2.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002345 610.0
DYD3_k127_3463149_10 COG0526 Thiol-disulfide isomerase and thioredoxins - - - 0.000000000000000000000000000000001004 139.0
DYD3_k127_3463149_11 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.0000000000004363 73.0
DYD3_k127_3463149_12 Biotin carboxylase K01961 GO:0003674,GO:0003824,GO:0004075,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016053,GO:0016874,GO:0016879,GO:0019216,GO:0019217,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032787,GO:0042304,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046394,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:1901576 6.3.4.14,6.4.1.2 0.0001919 44.0
DYD3_k127_3463149_2 PFAM Carbamoyl-phosphate synthase L chain, ATP binding domain, Biotin carboxylase C-terminal domain, Carbamoyl-phosphate synthase L chain, N-terminal domain K01961 GO:0003674,GO:0003824,GO:0004075,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016053,GO:0016874,GO:0016879,GO:0019216,GO:0019217,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032787,GO:0042304,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046394,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:1901576 6.3.4.14,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 340.0
DYD3_k127_3463149_3 Shikimate dehydrogenase substrate binding domain K00014 - 1.1.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002116 315.0
DYD3_k127_3463149_4 COG0810 Periplasmic protein TonB, links inner and outer membranes K03832 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001916 278.0
DYD3_k127_3463149_5 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.0000000000000000000000000000000000000000000000000000000000002029 215.0
DYD3_k127_3463149_6 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.0000000000000000000000000000000000000000000000000000000132 201.0
DYD3_k127_3463149_7 Uncharacterised protein family (UPF0227) K07000 - - 0.00000000000000000000000000000000000000000000000000001357 199.0
DYD3_k127_3463149_8 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.0000000000000000000000000000000000000000000000000001508 193.0
DYD3_k127_3463149_9 mRNA catabolic process - - - 0.0000000000000000000000000000000000000000000002585 174.0
DYD3_k127_3547487_0 Belongs to the DapA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001898 505.0
DYD3_k127_3547487_1 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004188 462.0
DYD3_k127_3547487_10 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.00000001946 57.0
DYD3_k127_3547487_11 Tripartite tricarboxylate transporter TctB family - - - 0.00000002369 57.0
DYD3_k127_3547487_2 NAD dependent epimerase/dehydratase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 435.0
DYD3_k127_3547487_3 Cobalamin-independent synthase, Catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001644 403.0
DYD3_k127_3547487_4 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components K02051 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009208 385.0
DYD3_k127_3547487_5 PFAM ABC transporter K02049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 381.0
DYD3_k127_3547487_6 Binding-protein-dependent transport system inner membrane component K02050 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005435 317.0
DYD3_k127_3547487_7 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000000000000000000000000000009672 229.0
DYD3_k127_3547487_8 ChrR Cupin-like domain - - - 0.0000000000000000000000000000000000000007716 154.0
DYD3_k127_3547487_9 Phytanoyl-CoA dioxygenase (PhyH) - - - 0.000000000000000000000001215 113.0
DYD3_k127_3581908_0 Tripartite tricarboxylate transporter TctA family K07793 - - 2.114e-244 764.0
DYD3_k127_3581908_1 Tripartite tricarboxylate transporter TctA family K07793 - - 5.498e-222 698.0
DYD3_k127_3581908_10 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006437 340.0
DYD3_k127_3581908_11 HpcH/HpaI aldolase/citrate lyase family K01630 - 4.1.2.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002102 273.0
DYD3_k127_3581908_12 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001436 261.0
DYD3_k127_3581908_13 SnoaL-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000001954 231.0
DYD3_k127_3581908_14 ERAP1-like C-terminal domain K01256 - 3.4.11.2 0.000000000000000000000000000000000000000000000000000000000000000004504 241.0
DYD3_k127_3581908_15 PFAM glutathione-dependent formaldehyde-activating - - - 0.0000000000000000000000000000000000000000000000000000001148 199.0
DYD3_k127_3581908_16 Glutathione-dependent formaldehyde-activating - - - 0.00000000000000000000000000000000000000000000000004052 187.0
DYD3_k127_3581908_17 - - - - 0.0000000000000000000000000000000000000000000000003041 183.0
DYD3_k127_3581908_18 MaoC like domain - - - 0.000000000000000000000000000000000000000000001005 171.0
DYD3_k127_3581908_19 Yhs domain-containing protein - - - 0.000000000000000000000000000000000000000000001749 171.0
DYD3_k127_3581908_2 Rieske [2Fe-2S] domain - - - 2.753e-209 659.0
DYD3_k127_3581908_21 Tripartite tricarboxylate transporter TctB family - - - 0.00000000000000000000000373 108.0
DYD3_k127_3581908_22 - - - - 0.0000000003126 70.0
DYD3_k127_3581908_24 Belongs to the ompA family K03640 - - 0.000001038 58.0
DYD3_k127_3581908_3 Belongs to the glutamine synthetase family K01915 - 6.3.1.2 5.122e-208 675.0
DYD3_k127_3581908_4 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000584 602.0
DYD3_k127_3581908_5 PFAM Adenylate and Guanylate cyclase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005393 547.0
DYD3_k127_3581908_6 Pfam Cupin K00450,K11948 - 1.13.11.38,1.13.11.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 512.0
DYD3_k127_3581908_7 Adenylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003329 429.0
DYD3_k127_3581908_8 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 413.0
DYD3_k127_3581908_9 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 396.0
DYD3_k127_3604613_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 2.081e-197 625.0
DYD3_k127_3604613_1 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004397 498.0
DYD3_k127_3604613_2 PFAM monooxygenase FAD-binding K05712 - 1.14.13.127 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007803 424.0
DYD3_k127_3604613_3 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007597 316.0
DYD3_k127_3604613_4 Glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002987 274.0
DYD3_k127_3604613_6 Protein of unknown function (DUF3617) - - - 0.00000006961 61.0
DYD3_k127_3707733_0 Poly(R)-hydroxyalkanoic acid synthase, class I K03821 - - 1.502e-211 674.0
DYD3_k127_3707733_1 Belongs to the thiolase family K00626 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001911 603.0
DYD3_k127_3707733_2 Acetoacetyl-CoA reductase K00023 - 1.1.1.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 391.0
DYD3_k127_3707733_3 ZIP Zinc transporter K16267 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 336.0
DYD3_k127_3707733_4 Belongs to the short-chain dehydrogenases reductases (SDR) family K00023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0042579,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464 1.1.1.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001316 321.0
DYD3_k127_3707733_5 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001216 281.0
DYD3_k127_3707733_6 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000302 273.0
DYD3_k127_3707733_7 synthesis repressor, PhaR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000799 252.0
DYD3_k127_377151_0 Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001823 436.0
DYD3_k127_377151_1 Periplasmic binding protein domain K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002792 379.0
DYD3_k127_377151_10 dehydratase - - - 0.00000000000000000000000000000000000000000000000000000005755 201.0
DYD3_k127_377151_11 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000001921 187.0
DYD3_k127_377151_12 MOSC domain protein beta barrel domain protein K07140 - - 0.00000000000000000000000000000000000005562 152.0
DYD3_k127_377151_2 Branched-chain amino acid transport system / permease component K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005288 368.0
DYD3_k127_377151_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005898 364.0
DYD3_k127_377151_4 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 346.0
DYD3_k127_377151_5 Endonuclease Exonuclease phosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000422 333.0
DYD3_k127_377151_6 leucine import across plasma membrane K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001058 278.0
DYD3_k127_377151_7 COG0410 ABC-type branched-chain amino acid transport systems, ATPase component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001885 276.0
DYD3_k127_377151_8 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K00666 - - 0.00000000000000000000000000000000000000000000000000000000000007874 214.0
DYD3_k127_377151_9 2-phosphosulfolactate phosphatase activity K05979 GO:0003674,GO:0003824,GO:0016829,GO:0016830,GO:0016831,GO:0050545 3.1.3.71 0.0000000000000000000000000000000000000000000000000000000000004209 226.0
DYD3_k127_3826154_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1453.0
DYD3_k127_3826154_1 chain 5 L K00341 - 1.6.5.3 1.546e-287 896.0
DYD3_k127_3826154_2 COG1008 NADH ubiquinone oxidoreductase subunit 4 (chain M) K00342 - 1.6.5.3 4.985e-246 766.0
DYD3_k127_3826154_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 581.0
DYD3_k127_3826154_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.00000000000000000000000000000001798 126.0
DYD3_k127_3826154_5 PFAM NUDIX hydrolase K01515 - 3.6.1.13 0.000000007125 58.0
DYD3_k127_3839255_0 Histidine kinase-like ATPases - - - 2.952e-224 737.0
DYD3_k127_3839255_1 Belongs to the adenylyl cyclase class-4 guanylyl cyclase family K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003693 444.0
DYD3_k127_3839255_2 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004471 331.0
DYD3_k127_3839255_3 ABC transporter substrate binding protein K01989 - - 0.0000000000000000000000000000000000000000000000000000000000256 220.0
DYD3_k127_3839255_4 ABC transporter substrate binding protein K01989 - - 0.000000000000000000000000000000000000000000000000000000001901 211.0
DYD3_k127_3839255_5 ABC transporter substrate binding protein - - - 0.00000000000000000000000000000000000000000000000000003538 210.0
DYD3_k127_3839255_6 Pentapeptide repeats (9 copies) - - - 0.00000000000000000000000000000000000000000002772 171.0
DYD3_k127_3839255_7 PFAM response regulator receiver K11443 - - 0.00000000000000000000000000000005491 141.0
DYD3_k127_3940418_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003127 608.0
DYD3_k127_3940418_1 Protein of unknown function (DUF993) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 578.0
DYD3_k127_3940418_10 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000001175 162.0
DYD3_k127_3940418_11 TIGRFAM TRAP transporter, DctM subunit - - - 0.000000000000004312 79.0
DYD3_k127_3940418_12 Tripartite tricarboxylate transporter TctB family - - - 0.000000001814 62.0
DYD3_k127_3940418_2 Protein conserved in bacteria K07793 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 586.0
DYD3_k127_3940418_3 Bacterial extracellular solute-binding protein, family 7 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000424 521.0
DYD3_k127_3940418_4 Mandelate Racemase Muconate Lactonizing - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008174 523.0
DYD3_k127_3940418_5 PFAM Mandelate racemase muconate lactonizing enzyme, C-terminal domain K18983 - 5.5.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 458.0
DYD3_k127_3940418_6 Xylose isomerase-like TIM barrel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005994 339.0
DYD3_k127_3940418_7 Trap-type c4-dicarboxylate transport system, small permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001102 259.0
DYD3_k127_3940418_8 PFAM regulatory protein TetR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007167 257.0
DYD3_k127_3940418_9 Taurine catabolism dioxygenase TauD, TfdA family K03119 - 1.14.11.17 0.000000000000000000000000000000000000000000000000000000000001306 220.0
DYD3_k127_3969476_0 Acetyl-coenzyme A synthetase N-terminus K01907 - 6.2.1.16 3.959e-304 945.0
DYD3_k127_3969476_1 Electron transfer flavoprotein-ubiquinone oxidoreductase K00311 - 1.5.5.1 2.766e-291 905.0
DYD3_k127_3969476_2 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008642 266.0
DYD3_k127_3969476_3 lactoylglutathione lyase activity - - - 0.0000000000000000000000000000000000000000000000000000001301 199.0
DYD3_k127_3969476_4 Thioesterase superfamily K07107 - - 0.000000000000000000000000000000000008933 146.0
DYD3_k127_3969476_5 protein conserved in bacteria - - - 0.00000000000000001605 94.0
DYD3_k127_3988389_0 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 4.366e-202 646.0
DYD3_k127_3988389_1 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003951 589.0
DYD3_k127_3988389_10 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.000000000000000000000000000000000000000003895 167.0
DYD3_k127_3988389_11 KR domain - - - 0.000000000000000000000309 100.0
DYD3_k127_3988389_12 Transcriptional regulator - - - 0.00000000000222 70.0
DYD3_k127_3988389_2 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009767 414.0
DYD3_k127_3988389_3 Belongs to the enoyl-CoA hydratase isomerase family K01692,K01715 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 399.0
DYD3_k127_3988389_4 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 347.0
DYD3_k127_3988389_5 Enoyl-CoA hydratase/isomerase K15866 - 5.3.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001897 334.0
DYD3_k127_3988389_6 Bacterial transferase hexapeptide (six repeats) K02617,K08279 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001121 262.0
DYD3_k127_3988389_7 KR domain K07535 - - 0.000000000000000000000000000000000000000000000000000000000000000000001974 237.0
DYD3_k127_3988389_8 AlkA N-terminal domain K13529,K13530 - 3.2.2.21 0.00000000000000000000000000000000000000000000000000000000000000000341 229.0
DYD3_k127_3988389_9 phenylacetic acid degradation protein K02614 GO:0003674,GO:0003824,GO:0016289,GO:0016787,GO:0016788,GO:0016790 - 0.00000000000000000000000000000000000000000000001306 190.0
DYD3_k127_4028225_0 acyl-CoA dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004625 535.0
DYD3_k127_4028225_1 13-prostaglandin reductase activity K07119 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005105 392.0
DYD3_k127_4028225_10 Ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001037 300.0
DYD3_k127_4028225_11 RDD family - - - 0.00000000000000000000000000000000000000000006127 164.0
DYD3_k127_4028225_12 protein, possibly involved in aromatic compounds catabolism - - - 0.00000000000000000001069 99.0
DYD3_k127_4028225_2 Acyl-CoA dehydrogenase, middle domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002269 393.0
DYD3_k127_4028225_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000402 343.0
DYD3_k127_4028225_4 Belongs to the GST superfamily K00799,K11209 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004726 335.0
DYD3_k127_4028225_5 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006355 331.0
DYD3_k127_4028225_6 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00065 - 1.1.1.127 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001466 322.0
DYD3_k127_4028225_7 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 320.0
DYD3_k127_4028225_8 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002449 311.0
DYD3_k127_4028225_9 KR domain K00076,K08081 - 1.1.1.159,1.1.1.206 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002449 310.0
DYD3_k127_4188195_0 Amidase K01426,K02433 - 3.5.1.4,6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 588.0
DYD3_k127_4188195_1 Bacterial extracellular solute-binding protein K05813 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004074 545.0
DYD3_k127_4188195_2 Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 533.0
DYD3_k127_4188195_3 Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import. Responsible for energy coupling to the transport system K05816,K10111,K10112 - 3.6.3.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002686 433.0
DYD3_k127_4188195_4 probably responsible for the translocation of the substrate across the membrane K05815 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007048 420.0
DYD3_k127_4188195_5 transporter permease K05814 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 418.0
DYD3_k127_4188195_6 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.0000000000000000000000000000000000000000000001725 173.0
DYD3_k127_4188195_7 extracellular solute-binding protein K02035 - - 0.00000000000002159 81.0
DYD3_k127_4231285_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.0 1290.0
DYD3_k127_4231285_1 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 2.442e-281 878.0
DYD3_k127_4231285_10 Class II aldolase K01628,K22130 - 4.1.1.104,4.1.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001535 276.0
DYD3_k127_4231285_11 Helix-turn-helix domain, rpiR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000008351 244.0
DYD3_k127_4231285_12 Redoxin K03386 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000002723 229.0
DYD3_k127_4231285_13 PFAM OsmC family protein K04063 - - 0.0000000000000000000000000000000000000000000000000000002957 198.0
DYD3_k127_4231285_2 Major facilitator Superfamily K06902 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 578.0
DYD3_k127_4231285_3 NMT1-like family K07080 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003561 524.0
DYD3_k127_4231285_4 PFAM EAL domain, GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004916 537.0
DYD3_k127_4231285_5 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004822 454.0
DYD3_k127_4231285_6 Diguanylate cyclase phosphodiesterase with PAS PAC - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005392 473.0
DYD3_k127_4231285_7 Putative sugar-binding N-terminal domain K21948 - 2.7.1.217 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001652 437.0
DYD3_k127_4231285_8 SMP-30/Gluconolaconase/LRE-like region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001812 392.0
DYD3_k127_4231285_9 Belongs to the peptidase M16 family K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009876 335.0
DYD3_k127_4237337_0 Sodium:solute symporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002647 576.0
DYD3_k127_4237337_1 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005915 454.0
DYD3_k127_4237337_2 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000333 435.0
DYD3_k127_4237337_3 Glutathione S-transferase K03599 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001569 335.0
DYD3_k127_4237337_4 Cytochrome C1 family K00413 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001066 289.0
DYD3_k127_4237337_5 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 GO:0000287,GO:0003674,GO:0003824,GO:0004738,GO:0005488,GO:0005515,GO:0008150,GO:0008152,GO:0016491,GO:0016903,GO:0019842,GO:0030976,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0046872,GO:0046983,GO:0048037,GO:0050662,GO:0055114,GO:0097159,GO:1901363,GO:1901681 1.2.4.1 0.00000000000000000000000000000000000000000000000005814 185.0
DYD3_k127_4237337_6 stringent starvation protein b K03600 - - 0.0000000000000000000000000000000000000001793 155.0
DYD3_k127_4237337_7 Cold shock protein domain K03704 - - 0.0000000000000000000000000000005975 122.0
DYD3_k127_4257839_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0 1232.0
DYD3_k127_4257839_1 SNARE associated Golgi protein - - - 0.0 1006.0
DYD3_k127_4257839_10 Thioesterase superfamily - - - 0.000000000000000000000000000000000000000000000000002332 186.0
DYD3_k127_4257839_11 Aldolase/RraA - - - 0.0000000000000000000000000000000000000000000001824 177.0
DYD3_k127_4257839_12 - - - - 0.000000000000000000000000000000000000000000001663 170.0
DYD3_k127_4257839_13 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000000000007592 148.0
DYD3_k127_4257839_14 - - - - 0.000000000000000000000000000000000007223 143.0
DYD3_k127_4257839_15 - - - - 0.00000000000000008629 85.0
DYD3_k127_4257839_2 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002039 531.0
DYD3_k127_4257839_3 PFAM Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008859 476.0
DYD3_k127_4257839_4 PFAM ATPase family associated with various cellular activities (AAA) K01338 - 3.4.21.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004639 423.0
DYD3_k127_4257839_5 Protein of unknown function, DUF547 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000717 300.0
DYD3_k127_4257839_6 COG0639 Diadenosine tetraphosphatase and related serine threonine protein phosphatases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 294.0
DYD3_k127_4257839_7 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003552 270.0
DYD3_k127_4257839_8 Domain of unknown function (DUF4396) - - - 0.00000000000000000000000000000000000000000000000000000006018 200.0
DYD3_k127_4257839_9 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000001003 198.0
DYD3_k127_4267744_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 2.815e-245 790.0
DYD3_k127_4267744_1 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008532 569.0
DYD3_k127_4267744_2 histidyl-tRNA synthetase K01892 - 6.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 549.0
DYD3_k127_4267744_3 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002076 369.0
DYD3_k127_4267744_4 pfkB family carbohydrate kinase K00852,K18478 - 2.7.1.15,2.7.1.184 0.00000000000000000000000000000000000000000000000000000000000000006295 232.0
DYD3_k127_4267744_5 Tetratricopeptide repeat-like domain - - - 0.000000000000000000000000000000000000000000000000000000002314 207.0
DYD3_k127_4267744_6 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.00000000000000000000000000000000000000000000000001334 182.0
DYD3_k127_4267744_7 integral membrane protein - - - 0.00000000000000000000000000000000000000000000000004325 183.0
DYD3_k127_4267744_8 TetR Family - - - 0.00000000000000000000000000000000001638 142.0
DYD3_k127_4339886_0 MacB-like periplasmic core domain K02004 - - 4.201e-237 758.0
DYD3_k127_4339886_1 Amidohydrolase family - - - 2.648e-223 704.0
DYD3_k127_4339886_10 ABC transporter substrate binding protein K01989 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008859 327.0
DYD3_k127_4339886_11 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002227 323.0
DYD3_k127_4339886_12 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 309.0
DYD3_k127_4339886_13 Belongs to the enoyl-CoA hydratase isomerase family K01692,K11264 - 4.1.1.41,4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000006195 264.0
DYD3_k127_4339886_14 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000002321 212.0
DYD3_k127_4339886_15 Glycine zipper - - - 0.000000000000000000000000000000000000000000000000000009523 196.0
DYD3_k127_4339886_16 ABC transporter substrate binding protein K01989 - - 0.000000000000000000000000000000000000001072 157.0
DYD3_k127_4339886_17 redox protein, regulator of disulfide bond formation - - - 0.0000000000000000000000000000000003802 138.0
DYD3_k127_4339886_18 ACT domain - - - 0.000000000000000000000000000000008589 132.0
DYD3_k127_4339886_19 YCII-related domain K09780 - - 0.0000000000000000000000000000002032 125.0
DYD3_k127_4339886_2 AMP-binding enzyme C-terminal domain K02363 - 2.7.7.58,6.3.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004399 620.0
DYD3_k127_4339886_20 ThiS family - - - 0.0000000000000000000000000005328 117.0
DYD3_k127_4339886_21 Domain of unknown function (DUF4177) - - - 0.00000000000000000000000000263 112.0
DYD3_k127_4339886_22 - - - - 0.0000000000000000000000005294 113.0
DYD3_k127_4339886_23 Methyltransferase domain - - - 0.00000000000000000000001421 109.0
DYD3_k127_4339886_24 - - - - 0.000000000000002267 82.0
DYD3_k127_4339886_25 Haemolytic K08998 - - 0.000000000000004 81.0
DYD3_k127_4339886_3 cellulose binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009045 581.0
DYD3_k127_4339886_4 III protein, CoA-transferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007009 499.0
DYD3_k127_4339886_5 Taurine catabolism dioxygenase TauD, TfdA family K03119 - 1.14.11.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004108 411.0
DYD3_k127_4339886_6 Lipocalin-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 406.0
DYD3_k127_4339886_7 Haloacid dehalogenase, type II K01560 - 3.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007335 379.0
DYD3_k127_4339886_8 Thioredoxin-like K07152 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 377.0
DYD3_k127_4339886_9 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004051 338.0
DYD3_k127_4840895_0 AMP-binding enzyme K01895 - 6.2.1.1 3.929e-233 736.0
DYD3_k127_4840895_1 TRAP C4-dicarboxylate transport system permease DctM subunit - - - 4.709e-232 726.0
DYD3_k127_4840895_10 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001858 321.0
DYD3_k127_4840895_11 alanine dehydrogenase K00259 - 1.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002517 320.0
DYD3_k127_4840895_12 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004247 296.0
DYD3_k127_4840895_13 cephalosporin hydroxylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001116 273.0
DYD3_k127_4840895_14 Nudix N-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006581 270.0
DYD3_k127_4840895_15 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000001333 267.0
DYD3_k127_4840895_16 plastoquinol--plastocyanin reductase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007967 259.0
DYD3_k127_4840895_17 TRAP-type mannitol chloroaromatic compound transport system small permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000001896 258.0
DYD3_k127_4840895_18 Cytidylate kinase-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000003928 235.0
DYD3_k127_4840895_19 Haloacid dehalogenase-like hydrolase K01560 - 3.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000001085 234.0
DYD3_k127_4840895_2 PFAM Ammonium Transporter K03320 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002682 570.0
DYD3_k127_4840895_20 Part of a membrane complex involved in electron transport K03616 - - 0.00000000000000000000000000000000000000000000000000000000000001904 235.0
DYD3_k127_4840895_21 23S rRNA (guanine(2445)-N(2))-methyltransferase activity K21515 - 2.1.1.209 0.000000000000000000000000000000000000000000000003132 178.0
DYD3_k127_4840895_25 Nudix hydrolase - - - 0.00000001815 68.0
DYD3_k127_4840895_3 VWA domain containing CoxE-like protein K09989 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006106 558.0
DYD3_k127_4840895_4 AAA domain (Cdc48 subfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006868 485.0
DYD3_k127_4840895_5 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006182 467.0
DYD3_k127_4840895_6 metal-dependent hydrolase of the TIM-barrel fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002421 414.0
DYD3_k127_4840895_7 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001335 390.0
DYD3_k127_4840895_8 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002782 355.0
DYD3_k127_4840895_9 protein conserved in bacteria K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 366.0
DYD3_k127_4945612_0 acyl-CoA dehydrogenase activity K09456 - - 1.756e-204 651.0
DYD3_k127_4945612_1 Belongs to the FPG family K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001457 402.0
DYD3_k127_4945612_10 - - - - 0.000000000005675 74.0
DYD3_k127_4945612_11 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.000007511 51.0
DYD3_k127_4945612_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003154 415.0
DYD3_k127_4945612_3 response regulator K02483,K07661,K18073 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 330.0
DYD3_k127_4945612_4 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003228 311.0
DYD3_k127_4945612_5 PFAM band 7 protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009751 268.0
DYD3_k127_4945612_6 MgtC family K07507 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001469 256.0
DYD3_k127_4945612_7 Mut7-C RNAse domain K09122 - - 0.00000000000000000000000000000000000000000000000000000000000000116 233.0
DYD3_k127_4945612_8 DsrE/DsrF-like family - - - 0.0000000000000000000000000000000000000000003292 163.0
DYD3_k127_4945612_9 ATP-independent chaperone mediated protein folding - - - 0.000000000000000000004043 109.0
DYD3_k127_5152077_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1074.0
DYD3_k127_5152077_1 AAA ATPase domain - - - 1.268e-266 885.0
DYD3_k127_5152077_10 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis K00059 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0010130,GO:0016043,GO:0016491,GO:0016614,GO:0016616,GO:0018913,GO:0018915,GO:0022607,GO:0042537,GO:0043933,GO:0044085,GO:0044237,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 333.0
DYD3_k127_5152077_11 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000167 330.0
DYD3_k127_5152077_12 Sigma E regulatory protein, MucB RseB K03598 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005035 284.0
DYD3_k127_5152077_13 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000005005 271.0
DYD3_k127_5152077_14 Uroporphyrin-III C tetrapyrrole K07056 - 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000000000000000004009 251.0
DYD3_k127_5152077_15 HAD-superfamily hydrolase, subfamily IA, variant 1 K01091 - 3.1.3.18 0.00000000000000000000000000000000000000000000000000000000000000000001303 241.0
DYD3_k127_5152077_16 PFAM Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000003694 257.0
DYD3_k127_5152077_17 Maf-like protein K06287 - - 0.000000000000000000000000000000000000000000000000000006135 211.0
DYD3_k127_5152077_18 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K01104 GO:0000271,GO:0003674,GO:0003824,GO:0004721,GO:0004725,GO:0005975,GO:0005976,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009242,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0033692,GO:0034637,GO:0034645,GO:0035335,GO:0036211,GO:0042578,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044267,GO:0046377,GO:0071704,GO:0140096,GO:1901135,GO:1901137,GO:1901564,GO:1901576 3.1.3.48 0.0000000000000000000000000000000000000000000000001995 188.0
DYD3_k127_5152077_19 Protein involved in outer membrane biogenesis - - - 0.00000000000000000000000000000000000000000000007977 186.0
DYD3_k127_5152077_2 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 2.963e-259 829.0
DYD3_k127_5152077_20 rieske 2fe-2s - - - 0.0000000000000000000000000000000000009578 141.0
DYD3_k127_5152077_21 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.0000000000000000000000000000000005465 132.0
DYD3_k127_5152077_22 Anti sigma-E protein RseA, N-terminal domain K03597 - - 0.0000000000000000000000006456 111.0
DYD3_k127_5152077_23 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.0000000000000000000000006623 106.0
DYD3_k127_5152077_24 Uncharacterized ACR, COG1399 K07040 - - 0.000000000000000000006221 106.0
DYD3_k127_5152077_25 Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility - - - 0.0000003058 61.0
DYD3_k127_5152077_3 catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-acp K00646,K09458 GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0016740,GO:0016746,GO:0016747,GO:0033817 2.3.1.179 1.155e-202 639.0
DYD3_k127_5152077_4 Aminotransferase class I and II K00832 - 2.6.1.57 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000709 579.0
DYD3_k127_5152077_5 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004217 440.0
DYD3_k127_5152077_6 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002876 427.0
DYD3_k127_5152077_7 signal peptide peptidase K04773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003508 389.0
DYD3_k127_5152077_8 malonyl CoA-acyl carrier protein transacylase K00645,K15355 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001834 384.0
DYD3_k127_5152077_9 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009532 355.0
DYD3_k127_5438735_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 1.665e-277 861.0
DYD3_k127_5438735_1 homoserine dehydrogenase - - - 2.02e-218 685.0
DYD3_k127_5438735_10 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001472 293.0
DYD3_k127_5438735_11 PFAM class II aldolase adducin family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002196 286.0
DYD3_k127_5438735_12 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001261 276.0
DYD3_k127_5438735_13 Haloacid dehalogenase K01560 - 3.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002087 271.0
DYD3_k127_5438735_14 phosphorelay sensor kinase activity K02342,K02660 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000003379 221.0
DYD3_k127_5438735_15 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP - - - 0.000000000000000000000000000000000000000000000000009988 205.0
DYD3_k127_5438735_16 Carboxymuconolactone decarboxylase family - - - 0.0000000000000000000000000000000000000000000000003043 181.0
DYD3_k127_5438735_17 - - - - 0.0000000000000000000000000000000000001554 161.0
DYD3_k127_5438735_18 - - - - 0.000000000000000000000000000000000001078 162.0
DYD3_k127_5438735_19 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589 - - 0.0000000000000000000000000005352 123.0
DYD3_k127_5438735_2 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 3.034e-217 680.0
DYD3_k127_5438735_21 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.0001185 49.0
DYD3_k127_5438735_3 NMT1-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002254 506.0
DYD3_k127_5438735_4 PA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001164 504.0
DYD3_k127_5438735_5 Protein involved in biosynthesis of mitomycin antibiotics polyketide fumonisin K10674 - 1.14.11.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002856 467.0
DYD3_k127_5438735_6 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase K01627 - 2.5.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003466 434.0
DYD3_k127_5438735_7 Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system K02049,K15555 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005631 404.0
DYD3_k127_5438735_8 Binding-protein-dependent transport system inner membrane component K02050 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003612 386.0
DYD3_k127_5438735_9 ATPase MipZ K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009069 301.0
DYD3_k127_5472257_0 AAA ATPase domain K01768 - 4.6.1.1 3.158e-220 715.0
DYD3_k127_5472257_1 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001313 547.0
DYD3_k127_5472257_2 PFAM beta-lactamase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008006 524.0
DYD3_k127_5472257_3 Aldolase/RraA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004005 293.0
DYD3_k127_5472257_4 Class II Aldolase and Adducin N-terminal domain K01628 - 4.1.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006498 294.0
DYD3_k127_5472257_5 transporter component K07112 - - 0.000000000000000000000000000000000000000004474 165.0
DYD3_k127_5472257_6 transporter component K07112 - - 0.0000000000000000000000000000000000000004625 153.0
DYD3_k127_5472257_7 Trap-type c4-dicarboxylate transport system, small permease component K11689 - - 0.000000000000000000000000002698 118.0
DYD3_k127_5472257_8 Metal-sensitive transcriptional repressor - - - 0.0002103 45.0
DYD3_k127_5551828_0 Orn/Lys/Arg decarboxylase, C-terminal domain K01583 - 4.1.1.19 2.147e-288 901.0
DYD3_k127_5551828_1 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 4.298e-210 666.0
DYD3_k127_5551828_2 Belongs to the argininosuccinate synthase family. Type 2 subfamily K01940 - 6.3.4.5 1.074e-198 630.0
DYD3_k127_5551828_3 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008679 552.0
DYD3_k127_5551828_4 PFAM aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008763 528.0
DYD3_k127_5551828_5 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003889 347.0
DYD3_k127_5551828_6 Transglutaminase-like superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000001167 239.0
DYD3_k127_5551828_7 Protein of unknown function (DUF3579) - - - 0.000000000000000003112 91.0
DYD3_k127_5551828_8 Binds directly to 16S ribosomal RNA K02968 - - 0.000000000000000006309 88.0
DYD3_k127_5551828_9 Involved in the TonB-independent uptake of proteins K03641 - - 0.00000000000000003107 93.0
DYD3_k127_5584107_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009939 475.0
DYD3_k127_5584107_1 Belongs to the RNA methyltransferase TrmD family K00554 GO:0000287,GO:0001510,GO:0002939,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050518,GO:0052906,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005018 312.0
DYD3_k127_5584107_2 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.000000000000000000000000000000000000000000000000000000005045 201.0
DYD3_k127_5584107_3 AIR synthase related protein, N-terminal domain K00946 - 2.7.4.16 0.0000000000000000000000000000000000000000000000006665 183.0
DYD3_k127_5584107_4 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.000000000000000000000000000000000000000000001161 171.0
DYD3_k127_5584107_5 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.00000000000000000000000000000000001023 144.0
DYD3_k127_5584107_6 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000000000000893 139.0
DYD3_k127_5584107_7 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.0000000000000000000006009 96.0
DYD3_k127_5584107_8 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway K00852 - 2.7.1.15 0.0004185 47.0
DYD3_k127_5636550_0 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002662 415.0
DYD3_k127_5636550_1 COG1651 Protein-disulfide isomerase - - - 0.00000000000000000000000000000000000000000000000000000000001773 221.0
DYD3_k127_5636550_2 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000001913 205.0
DYD3_k127_5636550_3 - - - - 0.0000000000000000000000000000000000001224 146.0
DYD3_k127_5636550_4 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 0.0000000000000000000000000008173 123.0
DYD3_k127_5636550_5 Copper binding periplasmic protein CusF - - - 0.00000000000002418 73.0
DYD3_k127_5687140_0 D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase K01621 - 4.1.2.22,4.1.2.9 0.0 1337.0
DYD3_k127_5687140_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.0 1061.0
DYD3_k127_5687140_2 cation transport ATPase K01533 - 3.6.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004248 479.0
DYD3_k127_5687140_3 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 445.0
DYD3_k127_5687140_4 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001765 448.0
DYD3_k127_5687140_5 very-long-chain-acyl-CoA dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001978 391.0
DYD3_k127_5687140_6 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006505 351.0
DYD3_k127_5687140_7 Universal stress protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003375 264.0
DYD3_k127_5687140_8 adenylylsulfate kinase activity K00860,K00955 - 2.7.1.25,2.7.7.4 0.00000000000000000000000000000000000000001108 163.0
DYD3_k127_5687140_9 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000006507 126.0
DYD3_k127_5739351_0 Domain of unknown function (DUF3458_C) ARM repeats K01256 - 3.4.11.2 0.0 1052.0
DYD3_k127_5739351_1 Tetratricopeptide repeats K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001852 322.0
DYD3_k127_5739351_2 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002558 310.0
DYD3_k127_5739351_3 NnrU protein - - - 0.000000000000000000000000000000000000000000000000001207 191.0
DYD3_k127_575590_0 E1 component K00164 - 1.2.4.2 0.0 1294.0
DYD3_k127_575590_1 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 - 1.3.5.1,1.3.5.4 2.5e-265 834.0
DYD3_k127_575590_2 Belongs to the citrate synthase family K01647 - 2.3.3.1 2.124e-224 706.0
DYD3_k127_575590_3 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004808 485.0
DYD3_k127_575590_4 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00240 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007493 423.0
DYD3_k127_575590_5 Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate K01841,K03417 - 4.1.3.30,5.4.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009712 304.0
DYD3_k127_575590_6 Succinate dehydrogenase hydrophobic membrane anchor protein K00242 - - 0.000000000000000000000000000000000006578 140.0
DYD3_k127_575590_7 COG2009 Succinate dehydrogenase fumarate reductase, cytochrome b subunit K00241 - - 0.0000000000000000000000000000000002777 136.0
DYD3_k127_575590_8 Flavinator of succinate dehydrogenase K09159 - - 0.0000000000123 76.0
DYD3_k127_5789908_0 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 8.777e-288 893.0
DYD3_k127_5789908_1 Histidine ammonia-lyase K01745 - 4.3.1.3 4.483e-197 629.0
DYD3_k127_5789908_10 NMT1-like family K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002587 321.0
DYD3_k127_5789908_11 Thioesterase superfamily - - - 0.00000000000000000000000000000000000000000002621 164.0
DYD3_k127_5789908_12 phosphorelay signal transduction system K11443 - - 0.000000000000000000000000000000000001341 143.0
DYD3_k127_5789908_2 Ornithine cyclodeaminase/mu-crystallin family K01750 - 4.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001972 571.0
DYD3_k127_5789908_3 Methionine synthase K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000995 520.0
DYD3_k127_5789908_4 imidazolonepropionase activity K01468 - 3.5.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003002 519.0
DYD3_k127_5789908_5 Histidine kinase-like ATPases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007642 499.0
DYD3_k127_5789908_6 Amidohydrolase family K05603 - 3.5.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 478.0
DYD3_k127_5789908_7 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000092 343.0
DYD3_k127_5789908_8 N-formylglutamate amidohydrolase K01458,K01479 - 3.5.1.68,3.5.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004848 355.0
DYD3_k127_5789908_9 COG3221 ABC-type phosphate phosphonate transport system, periplasmic component K02044 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009846 335.0
DYD3_k127_5969846_0 COG2804 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02652 - - 9.592e-243 762.0
DYD3_k127_5969846_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008752 597.0
DYD3_k127_5969846_10 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.0000000000000000000000000000000000000000000000000000000000008445 229.0
DYD3_k127_5969846_11 DNA gyrase inhibitor YacG - - - 0.00000000000001676 76.0
DYD3_k127_5969846_12 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.000000276 54.0
DYD3_k127_5969846_2 Domain of unknown function DUF21 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004586 470.0
DYD3_k127_5969846_3 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 386.0
DYD3_k127_5969846_4 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 353.0
DYD3_k127_5969846_5 Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity K18778 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001866 342.0
DYD3_k127_5969846_6 PFAM type II secretion system K02653 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005175 329.0
DYD3_k127_5969846_7 type II secretion system protein K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006821 289.0
DYD3_k127_5969846_8 Cytochrome C assembly protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009157 260.0
DYD3_k127_5969846_9 ATPase (AAA K06923 - - 0.00000000000000000000000000000000000000000000000000000000000000000003382 234.0
DYD3_k127_5969972_0 Malic enzyme K00029 - 1.1.1.40 1.8e-199 631.0
DYD3_k127_5969972_1 PFAM Alcohol dehydrogenase zinc-binding domain protein K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007002 454.0
DYD3_k127_5969972_2 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008011 422.0
DYD3_k127_5969972_3 FIST_C - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004152 364.0
DYD3_k127_5969972_4 - - - - 0.00000000000000000000005742 103.0
DYD3_k127_6004345_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 0.0 1491.0
DYD3_k127_6004345_1 4Fe-4S dicluster domain - - - 3.877e-245 775.0
DYD3_k127_6004345_10 formate dehydrogenase K00127 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000303 372.0
DYD3_k127_6004345_11 COG0477 Permeases of the major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007398 371.0
DYD3_k127_6004345_12 Periplasmic binding protein K02016 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 332.0
DYD3_k127_6004345_13 Chromate resistance exported protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001618 285.0
DYD3_k127_6004345_14 ATPases associated with a variety of cellular activities K02013 - 3.6.3.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004654 298.0
DYD3_k127_6004345_15 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000467 276.0
DYD3_k127_6004345_16 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 0.00000000000000000000000000000000000000000000000000000000000000001389 248.0
DYD3_k127_6004345_17 Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system K02017 - 3.6.3.29 0.00000000000000000000000000000000000000000000000000000000000000008734 228.0
DYD3_k127_6004345_18 Type II secretion system (T2SS), protein G K02456 - - 0.000000000000000000000000000000000000000000000000000000001563 205.0
DYD3_k127_6004345_19 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04565 - 1.15.1.1 0.00000000000000000000000000000000000000000000000000002277 195.0
DYD3_k127_6004345_2 Insecticidal toxin complex protein TcaC - - - 5.433e-225 742.0
DYD3_k127_6004345_20 Protein of unknown function (DUF3305) - - - 0.000000000000000000000000000000000000000002372 160.0
DYD3_k127_6004345_21 Insecticidal toxin complex protein TcaC - - - 0.0000000000000000000000000000000001513 151.0
DYD3_k127_6004345_22 Nitrate reductase delta subunit - - - 0.0000000000000000000000000000005178 139.0
DYD3_k127_6004345_23 Domain of unknown function (DUF1330) - - - 0.000000000000000000000000001378 114.0
DYD3_k127_6004345_24 Protein of unknown function (DUF3306) - - - 0.0000000000000004083 89.0
DYD3_k127_6004345_25 unsaturated rhamnogalacturonyl hydrolase activity - - - 0.000000000000001256 91.0
DYD3_k127_6004345_26 - - - - 0.0000000000957 67.0
DYD3_k127_6004345_27 - - - - 0.0000008271 54.0
DYD3_k127_6004345_3 Chromate K07240 - - 4.666e-194 614.0
DYD3_k127_6004345_4 MoeA N-terminal region (domain I and II) K03750 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005855 548.0
DYD3_k127_6004345_5 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 487.0
DYD3_k127_6004345_6 PFAM type II secretion system K02455,K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002054 446.0
DYD3_k127_6004345_7 4Fe-4S dicluster domain K00124,K07307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004115 396.0
DYD3_k127_6004345_8 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 387.0
DYD3_k127_6004345_9 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008979 395.0
DYD3_k127_6076470_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1326.0
DYD3_k127_6076470_1 TIGRFAM Acetolactate synthase, large subunit, biosynthetic K01652 - 2.2.1.6 2.595e-313 966.0
DYD3_k127_6076470_10 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002913 338.0
DYD3_k127_6076470_11 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006156 321.0
DYD3_k127_6076470_12 DsrE/DsrF/DrsH-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005772 271.0
DYD3_k127_6076470_13 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006502 249.0
DYD3_k127_6076470_14 Acetolactate synthase small K01653 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000003425 257.0
DYD3_k127_6076470_15 Haem-degrading - - - 0.0000000000000000000000000000000000000000000000009625 183.0
DYD3_k127_6076470_16 DNA polymerase III, chi subunit K02339 - 2.7.7.7 0.0000000000000000000000000000000004145 151.0
DYD3_k127_6076470_17 iron ion homeostasis - - - 0.000000000000000000000000003644 117.0
DYD3_k127_6076470_18 RDD family - - - 0.0000000000000000000000001393 112.0
DYD3_k127_6076470_19 Protein of unknown function (DUF3106) - - - 0.0000000000000000000003036 108.0
DYD3_k127_6076470_2 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0019904,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097718,GO:0140096,GO:1901564 3.4.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008925 584.0
DYD3_k127_6076470_20 Protein of unknown function (DUF3619) - - - 0.000000000000002731 81.0
DYD3_k127_6076470_21 PFAM biotin lipoate A B protein ligase - - - 0.0000000000001418 81.0
DYD3_k127_6076470_22 cheY-homologous receiver domain - - - 0.00000000000838 68.0
DYD3_k127_6076470_23 - - - - 0.0000000009741 60.0
DYD3_k127_6076470_24 - - - - 0.0001304 51.0
DYD3_k127_6076470_3 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002076 555.0
DYD3_k127_6076470_4 Transmembrane secretion effector - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007405 404.0
DYD3_k127_6076470_5 Permease YjgP YjgQ family K07091 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003811 398.0
DYD3_k127_6076470_6 Sulphur transport K07112 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006674 379.0
DYD3_k127_6076470_7 Permease, YjgP YjgQ family K11720 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004403 376.0
DYD3_k127_6076470_8 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 344.0
DYD3_k127_6076470_9 Tetratricopeptide repeats - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002337 354.0
DYD3_k127_6097019_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.0 1384.0
DYD3_k127_6097019_1 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004972 535.0
DYD3_k127_6097019_10 D-arabinono-1,4-lactone oxidase - - - 0.000000000000000006025 96.0
DYD3_k127_6097019_11 - - - - 0.00000000001018 75.0
DYD3_k127_6097019_2 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009916 496.0
DYD3_k127_6097019_3 permease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 351.0
DYD3_k127_6097019_4 haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006987 304.0
DYD3_k127_6097019_5 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001624 270.0
DYD3_k127_6097019_6 Deoxynucleoside kinase - - - 0.0000000000000000000000000000000000000000000000000001305 189.0
DYD3_k127_6097019_7 Helix-turn-helix domain protein - - - 0.000000000000000000000000000000000000000000000000001353 191.0
DYD3_k127_6097019_8 Belongs to the DnaA family K10763 - - 0.0000000000000000000000000000000000000000000000001126 192.0
DYD3_k127_6097019_9 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.000000000000000000000000000000000000000000000006183 181.0
DYD3_k127_6176230_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 6.75e-305 949.0
DYD3_k127_6176230_1 ABC-type dipeptide transport system, periplasmic component K02035 - - 1.831e-235 738.0
DYD3_k127_6176230_10 Binding-protein-dependent transport system inner membrane component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004482 473.0
DYD3_k127_6176230_11 N-terminal TM domain of oligopeptide transport permease C - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007717 447.0
DYD3_k127_6176230_12 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 436.0
DYD3_k127_6176230_13 5'-nucleotidase K01081 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004063 430.0
DYD3_k127_6176230_14 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001994 426.0
DYD3_k127_6176230_15 ATP-grasp domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001888 414.0
DYD3_k127_6176230_16 Protein kinase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007612 389.0
DYD3_k127_6176230_17 A G-specific K03575 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009018 377.0
DYD3_k127_6176230_18 PFAM amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 379.0
DYD3_k127_6176230_19 ABC-type (Unclassified) transport system, ATPase component K06861 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005628 366.0
DYD3_k127_6176230_2 Belongs to the monovalent cation proton antiporter 2 (cpa2) transporter (TC 2.A.37) family K03455 - - 1.146e-214 687.0
DYD3_k127_6176230_20 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 346.0
DYD3_k127_6176230_21 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 344.0
DYD3_k127_6176230_22 TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007211 341.0
DYD3_k127_6176230_23 Displays ATPase and GTPase activities K06958 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005806 327.0
DYD3_k127_6176230_24 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002388 331.0
DYD3_k127_6176230_25 PFAM Metal-dependent phosphohydrolase, HD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001469 327.0
DYD3_k127_6176230_26 Stress-induced protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009721 311.0
DYD3_k127_6176230_27 PhoQ Sensor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000381 314.0
DYD3_k127_6176230_28 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003078 291.0
DYD3_k127_6176230_29 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008555 297.0
DYD3_k127_6176230_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007222 538.0
DYD3_k127_6176230_30 Protein of unknown function, DUF481 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003296 276.0
DYD3_k127_6176230_31 COG0631 Serine threonine protein phosphatase K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000001667 272.0
DYD3_k127_6176230_33 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000001397 243.0
DYD3_k127_6176230_34 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.000000000000000000000000000000000000000000000000000000000000000000004913 241.0
DYD3_k127_6176230_35 COG1762 Phosphotransferase system mannitol fructose-specific IIA domain (Ntr-type) K02806 - - 0.00000000000000000000000000000000000000000000000000000000000000000002003 237.0
DYD3_k127_6176230_36 Prokaryotic N-terminal methylation motif - - - 0.00000000000000000000000000000000000000000000000000000000001064 215.0
DYD3_k127_6176230_37 Protein of unknown function (DUF971) - - - 0.00000000000000000000000000000000000000000000000000000002194 203.0
DYD3_k127_6176230_38 peptidase S16 K07157 - - 0.0000000000000000000000000000000000000000000000000001746 194.0
DYD3_k127_6176230_39 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 - 3.1.3.45 0.0000000000000000000000000000000000000000000000000009901 188.0
DYD3_k127_6176230_4 radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 533.0
DYD3_k127_6176230_40 O-methyltransferase - - - 0.0000000000000000000000000000000000000000000006556 174.0
DYD3_k127_6176230_41 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.00000000000000000000000000000000000000005023 160.0
DYD3_k127_6176230_42 ribosomal subunit interface protein K05808 - - 0.00000000000000000000000000000000000001553 148.0
DYD3_k127_6176230_43 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane K09774 - - 0.000000000000000000000000000000002113 142.0
DYD3_k127_6176230_44 Lipopolysaccharide-assembly, LptC-related K11719 - - 0.00000000000000000000000000004301 126.0
DYD3_k127_6176230_45 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.00000000000000000000002089 102.0
DYD3_k127_6176230_46 ThiS family K03154 - - 0.000000000000000001086 88.0
DYD3_k127_6176230_47 - - - - 0.00001521 52.0
DYD3_k127_6176230_5 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004198 488.0
DYD3_k127_6176230_6 AsmA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 512.0
DYD3_k127_6176230_7 Belongs to the ABC transporter superfamily K02031 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 488.0
DYD3_k127_6176230_8 Metal-dependent amidase aminoacylase carboxypeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003322 476.0
DYD3_k127_6176230_9 Oligopeptide/dipeptide transporter, C-terminal region K02032 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003616 475.0
DYD3_k127_6338458_0 Cytochrome c-type biogenesis protein CcmF K02198 - - 3.549e-296 930.0
DYD3_k127_6338458_1 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 9.65e-277 869.0
DYD3_k127_6338458_10 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 386.0
DYD3_k127_6338458_11 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001698 399.0
DYD3_k127_6338458_12 Tetratricopeptide repeat K02200 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003396 285.0
DYD3_k127_6338458_13 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009491 271.0
DYD3_k127_6338458_14 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 - 2.1.1.185 0.00000000000000000000000000000000000000000000000000000000000000000000000000000154 293.0
DYD3_k127_6338458_15 Response regulator containing a CheY-like receiver domain and an HD-GYP domain K07814 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004255 273.0
DYD3_k127_6338458_16 Histone methylation protein DOT1 - - - 0.00000000000000000000000000000000000000000000000000000000000000001503 248.0
DYD3_k127_6338458_17 oxidoreductase DsbE K02199 - - 0.00000000000000000000000000000000000000000000000000000000000000004581 231.0
DYD3_k127_6338458_18 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.00000000000000000000000000000000000000000000000000000000007478 212.0
DYD3_k127_6338458_19 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.0000000000000000000000000000000000000000000000000000000008101 205.0
DYD3_k127_6338458_2 ATPase related to phosphate starvation-inducible protein PhoH K07175 - - 4.195e-238 744.0
DYD3_k127_6338458_20 binds to the 23S rRNA K02939 - - 0.0000000000000000000000000000000000000000000000000000002284 199.0
DYD3_k127_6338458_21 metallophosphoesterase - - - 0.000000000000000000000000000000000000000000000000000001055 204.0
DYD3_k127_6338458_22 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.000000000000000000000000000000000000000000000000001235 190.0
DYD3_k127_6338458_23 subunit of a heme lyase K02200 - - 0.000000000000000000000000000000000000002273 151.0
DYD3_k127_6338458_24 FecR protein - - - 0.000000000000000000000000000000000000005244 160.0
DYD3_k127_6338458_25 Protein of unknown function (DUF498/DUF598) - - - 0.00000000000000000000000000000000000007329 152.0
DYD3_k127_6338458_26 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.0000000000000000000000000000000000003962 141.0
DYD3_k127_6338458_27 Iron-binding zinc finger CDGSH type - - - 0.0000000000000000000000000000000000048 145.0
DYD3_k127_6338458_28 Binds single-stranded DNA at the primosome assembly site (PAS) K02686 - - 0.0000000000000000001127 91.0
DYD3_k127_6338458_29 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02196 - - 0.00000000001052 66.0
DYD3_k127_6338458_3 His Kinase A (phosphoacceptor) domain - - - 9.284e-234 740.0
DYD3_k127_6338458_4 Aminotransferase class I and II K14261 - - 7.056e-221 690.0
DYD3_k127_6338458_5 Cysteine-rich domain - - - 6.164e-216 677.0
DYD3_k127_6338458_6 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 1.903e-199 632.0
DYD3_k127_6338458_7 Threonine synthase K01733 - 4.2.3.1 3.176e-197 632.0
DYD3_k127_6338458_8 homoserine dehydrogenase K00003 - 1.1.1.3 9.903e-194 636.0
DYD3_k127_6338458_9 Domain of Unknown Function (DUF748) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001306 486.0
DYD3_k127_6344036_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 8.157e-306 952.0
DYD3_k127_6344036_1 transport system fused permease components - - - 1.043e-209 672.0
DYD3_k127_6344036_10 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005131 351.0
DYD3_k127_6344036_11 Histidine kinase K07711 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001646 347.0
DYD3_k127_6344036_12 adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000003025 251.0
DYD3_k127_6344036_13 2-Keto-4-pentenoate hydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000002065 240.0
DYD3_k127_6344036_14 Protein of unknown function (DUF1223) - - - 0.00000000000000000000000000000000000000000000000000000002363 207.0
DYD3_k127_6344036_15 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.00000000000000000000000000000000000000000000000000007509 192.0
DYD3_k127_6344036_16 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000002507 144.0
DYD3_k127_6344036_17 Type IV pilus biogenesis stability protein PilW - - - 0.0000000000000000000000000000000001912 136.0
DYD3_k127_6344036_18 Acylphosphatase K01512 - 3.6.1.7 0.0000000000000000000003616 97.0
DYD3_k127_6344036_19 Major facilitator Superfamily - - - 0.000002267 60.0
DYD3_k127_6344036_2 PFAM Glycoside hydrolase 15-related - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002654 610.0
DYD3_k127_6344036_20 - - - - 0.000007018 51.0
DYD3_k127_6344036_21 DNA-sulfur modification-associated - - - 0.00003807 55.0
DYD3_k127_6344036_3 Belongs to the Orn Lys Arg decarboxylase class-II family K01581 - 4.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 572.0
DYD3_k127_6344036_4 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004891 558.0
DYD3_k127_6344036_5 response regulator K07715 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009987 533.0
DYD3_k127_6344036_6 CoA-transferase family III K18289 - 2.8.3.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001507 503.0
DYD3_k127_6344036_7 hydroperoxide reductase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004805 377.0
DYD3_k127_6344036_8 PFAM Serine threonine-protein kinase-like domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003065 369.0
DYD3_k127_6344036_9 NMT1-like family K07080 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 363.0
DYD3_k127_6349045_0 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 1.466e-244 769.0
DYD3_k127_6349045_1 Amidase K02433 - 6.3.5.6,6.3.5.7 9.912e-197 623.0
DYD3_k127_6349045_10 Allophanate hydrolase subunit 1 - - - 0.00000000000000000000000000000000000000000000000000000173 199.0
DYD3_k127_6349045_11 Glyoxalase-like domain - - - 0.0000000000000000000000000000000000000000000002957 189.0
DYD3_k127_6349045_12 Nitrile hydratase beta subunit K20807 - 4.2.1.84 0.000000000000000000000000000000000002478 142.0
DYD3_k127_6349045_13 Nitrile hydratase beta subunit K20807 - 4.2.1.84 0.0000000000000000000000000000001818 129.0
DYD3_k127_6349045_14 YCII-related domain - - - 0.000000000000000000000000000005319 121.0
DYD3_k127_6349045_15 transcriptional regulator - - - 0.00000001866 66.0
DYD3_k127_6349045_2 Cys/Met metabolism PLP-dependent enzyme K01740 - 2.5.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002446 565.0
DYD3_k127_6349045_3 COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005907 479.0
DYD3_k127_6349045_4 FMN-dependent dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009307 445.0
DYD3_k127_6349045_5 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002682 356.0
DYD3_k127_6349045_6 Belongs to the UPF0271 (lamB) family K07160 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002101 325.0
DYD3_k127_6349045_7 Allophanate hydrolase subunit 2 K06350 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000308 276.0
DYD3_k127_6349045_8 Nitrile hydratase K01721,K20807 - 4.2.1.84 0.00000000000000000000000000000000000000000000000000000000000000000000000000003274 263.0
DYD3_k127_6349045_9 CoA binding domain K06929 - - 0.0000000000000000000000000000000000000000000000000000000000000003361 227.0
DYD3_k127_6423194_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 0.0 1307.0
DYD3_k127_6423194_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K18361 - 1.17.5.1,3.1.2.25 0.0 1197.0
DYD3_k127_6423194_10 Reversible hydration of carbon dioxide K01673 GO:0003674,GO:0003824,GO:0004089,GO:0005488,GO:0008150,GO:0008270,GO:0015976,GO:0016829,GO:0016835,GO:0016836,GO:0043167,GO:0043169,GO:0046872,GO:0046914 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000001695 237.0
DYD3_k127_6423194_11 NapC/NirT cytochrome c family, N-terminal region K02569 - - 0.00000000000000000000000000000000000000000000000000000000001987 212.0
DYD3_k127_6423194_12 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K21563 - - 0.000000000000000000000000000000000000000000000000000002871 198.0
DYD3_k127_6423194_13 Cupin 2, conserved barrel - - - 0.0000000000000000000000000000000000000000000000007322 181.0
DYD3_k127_6423194_14 Thioesterase - - - 0.000000000000000000000000000000000000001208 153.0
DYD3_k127_6423194_15 Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000000000000121 144.0
DYD3_k127_6423194_16 transcriptional regulator - - - 0.000000000000000000000000000000000007769 142.0
DYD3_k127_6423194_17 Thioesterase - - - 0.00000000000000000000000000000001227 134.0
DYD3_k127_6423194_18 Invasion gene expression up-regulator SirB - - - 0.0000000000000000000000000000004806 126.0
DYD3_k127_6423194_19 Cytochrome c K08738 - - 0.000000000000000000000001456 109.0
DYD3_k127_6423194_2 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 1.452e-237 758.0
DYD3_k127_6423194_20 - - - - 0.0000000000000000000103 97.0
DYD3_k127_6423194_21 PFAM NnrS family protein K07234 - - 0.00000000000000007069 87.0
DYD3_k127_6423194_22 PFAM Heavy metal transport detoxification protein K07213 - - 0.000000000007609 75.0
DYD3_k127_6423194_3 Acyl-CoA dehydrogenase, C-terminal domain - - - 3.487e-195 620.0
DYD3_k127_6423194_4 Putative outer membrane beta-barrel porin, MtrB/PioB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001522 542.0
DYD3_k127_6423194_5 Iron-sulfur cluster-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009242 437.0
DYD3_k127_6423194_6 Cytochrome c3 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003447 380.0
DYD3_k127_6423194_7 4Fe-4S binding domain K18362 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008941 313.0
DYD3_k127_6423194_8 Barrel-sandwich domain of CusB or HlyD membrane-fusion K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001324 278.0
DYD3_k127_6423194_9 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000006994 265.0
DYD3_k127_6425112_0 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002349 554.0
DYD3_k127_6425112_1 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000341 517.0
DYD3_k127_6425112_2 Phosphotransferase enzyme family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002094 395.0
DYD3_k127_6425112_3 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004672 309.0
DYD3_k127_6425112_4 COG1136 ABC-type antimicrobial peptide transport system, ATPase component K02003 - - 0.00000000000000000000000000000000000000000003132 164.0
DYD3_k127_6425112_5 phosphorelay signal transduction system K11443 - - 0.00000000000000000000000000000000000002057 147.0
DYD3_k127_6449230_0 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 8.253e-201 640.0
DYD3_k127_6449230_1 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008043 597.0
DYD3_k127_6449230_10 Cytochrome P460 - - - 0.000000000000000000000000000000000000001498 153.0
DYD3_k127_6449230_2 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004645 465.0
DYD3_k127_6449230_3 membrane-bound lytic murein transglycosylase K08304 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001609 394.0
DYD3_k127_6449230_4 TIGRFAM Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K03185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008696 359.0
DYD3_k127_6449230_5 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001962 337.0
DYD3_k127_6449230_6 Indole-3-glycerol phosphate synthase K01609 - 4.1.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007464 320.0
DYD3_k127_6449230_7 PFAM Glutamine amidotransferase class-I K01658 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001875 297.0
DYD3_k127_6449230_8 ApaG domain K06195 - - 0.00000000000000000000000000000000000000000000000000000003643 198.0
DYD3_k127_6449230_9 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.0000000000000000000000000000000000000000000000008912 188.0
DYD3_k127_6481210_0 3-beta hydroxysteroid dehydrogenase/isomerase family K08678 - 4.1.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002727 525.0
DYD3_k127_6481210_1 fumarylacetoacetate (FAA) hydrolase K16171 - 3.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001729 475.0
DYD3_k127_6481210_2 Reduction of activated sulfate into sulfite K00390 - 1.8.4.10,1.8.4.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004695 286.0
DYD3_k127_6481210_3 Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate K00381,K00392 - 1.8.1.2,1.8.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006259 268.0
DYD3_k127_6481210_4 Tetrapyrrole (Corrin/Porphyrin) Methylases K02303 - 2.1.1.107 0.0000000000000000000000000000000000000000000000000000000000000000000001651 249.0
DYD3_k127_6481210_5 Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein K03611 - - 0.0000000000000000000000000000000000000000001991 164.0
DYD3_k127_6481210_6 conserved protein ucp030820 - - - 0.0000000000000000000000000000000000000000347 158.0
DYD3_k127_6481210_7 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.00000000000000000000000009439 108.0
DYD3_k127_6481210_8 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955,K00956 - 2.7.1.25,2.7.7.4 0.00000000212 67.0
DYD3_k127_6526411_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1169.0
DYD3_k127_6526411_1 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004774 573.0
DYD3_k127_6526411_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001371 261.0
DYD3_k127_6526411_3 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.0000000000000000000000000000000000000000000000000000000000000000258 228.0
DYD3_k127_6526411_4 NUDIX hydrolase - - - 0.000000000000000000000000000000000000000000000000007987 192.0
DYD3_k127_6526411_5 Protein of unknown function (DUF2946) - - - 0.000000000000000000000000000000000000000000005067 170.0
DYD3_k127_6526411_6 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000000002726 87.0
DYD3_k127_6569298_0 SMART alpha amylase catalytic sub domain K05343 - 3.2.1.1,5.4.99.16 0.0 1613.0
DYD3_k127_6569298_1 PFAM glycoside hydrolase, family 13 domain protein K01214,K02438 - 3.2.1.196,3.2.1.68 0.0 1160.0
DYD3_k127_6569298_10 Macrocin-O-methyltransferase (TylF) - - - 0.00000000000001656 77.0
DYD3_k127_6569298_11 Ankyrin repeat and SOCS K10326 GO:0000151,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016567,GO:0016740,GO:0019538,GO:0019787,GO:0019899,GO:0022603,GO:0031461,GO:0031462,GO:0031466,GO:0031625,GO:0032446,GO:0032991,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044389,GO:0044424,GO:0044444,GO:0044464,GO:0045595,GO:0045597,GO:0048518,GO:0048522,GO:0050789,GO:0050793,GO:0050794,GO:0051094,GO:0051239,GO:0051240,GO:0051865,GO:0061630,GO:0061659,GO:0065007,GO:0070647,GO:0071704,GO:0140096,GO:1901342,GO:1901564,GO:1902494,GO:1904018,GO:1990234,GO:2000026,GO:2001212,GO:2001214 - 0.000003072 59.0
DYD3_k127_6569298_2 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.0 1059.0
DYD3_k127_6569298_3 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB K16147 - 2.4.99.16 1.355e-319 996.0
DYD3_k127_6569298_4 SMART alpha amylase catalytic sub domain K01236 - 3.2.1.141 7.183e-245 770.0
DYD3_k127_6569298_5 PFAM Conserved TM helix repeat-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 314.0
DYD3_k127_6569298_6 SMART alpha amylase catalytic sub domain K00705,K06044 - 2.4.1.25,5.4.99.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004865 317.0
DYD3_k127_6569298_7 Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004187 293.0
DYD3_k127_6569298_8 AhpC/TSA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003818 258.0
DYD3_k127_6569298_9 Protein of unknown function (DUF3467) - - - 0.000000000000000000000000000004986 123.0
DYD3_k127_6572787_0 AMP-binding enzyme C-terminal domain K00666 - - 3.817e-227 717.0
DYD3_k127_6572787_1 Periplasmic binding protein K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000565 504.0
DYD3_k127_6572787_2 Dimerisation domain of Zinc Transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002399 351.0
DYD3_k127_6572787_3 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006247 325.0
DYD3_k127_6572787_4 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001239 283.0
DYD3_k127_6572787_5 L-phenylalanine transmembrane transporter activity K01995,K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003006 267.0
DYD3_k127_6572787_6 Histidine kinase - - - 0.0000009654 59.0
DYD3_k127_6652276_0 AcyL-CoA dehydrogenase K06445 - - 3.073e-321 1004.0
DYD3_k127_6652276_1 COG5265 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components K06147 - - 2.129e-236 745.0
DYD3_k127_6652276_10 Methyl-transferase K18911 - 2.1.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000189 330.0
DYD3_k127_6652276_11 Belongs to the peptidase S11 family K07262 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000228 284.0
DYD3_k127_6652276_12 Glutathione S-transferase K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000001823 245.0
DYD3_k127_6652276_13 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004303 244.0
DYD3_k127_6652276_14 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000003241 231.0
DYD3_k127_6652276_15 GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000001863 199.0
DYD3_k127_6652276_16 Thioesterase superfamily K10806 - - 0.0000000000000000000000000000000000000000000000009368 177.0
DYD3_k127_6652276_17 MarC family integral membrane protein K05595 - - 0.00000000000000000000000000000000000000000003352 168.0
DYD3_k127_6652276_2 3-hydroxyacyl-CoA dehydrogenase K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 1.739e-232 736.0
DYD3_k127_6652276_3 Belongs to the thiolase family K00626 - 2.3.1.9 4.942e-207 651.0
DYD3_k127_6652276_4 4Fe-4S ferredoxin, iron-sulfur binding K18929 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 616.0
DYD3_k127_6652276_5 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 501.0
DYD3_k127_6652276_6 aminotransferase class V K01556 - 3.7.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003874 406.0
DYD3_k127_6652276_7 Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety K00453 GO:0003674,GO:0003824,GO:0004833,GO:0005488,GO:0006082,GO:0006084,GO:0006139,GO:0006163,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006637,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009063,GO:0009072,GO:0009074,GO:0009108,GO:0009117,GO:0009150,GO:0009165,GO:0009259,GO:0009308,GO:0009310,GO:0009435,GO:0009987,GO:0016043,GO:0016053,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019441,GO:0019442,GO:0019637,GO:0019674,GO:0019693,GO:0019752,GO:0019805,GO:0020037,GO:0022607,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0034654,GO:0035383,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043436,GO:0043603,GO:0043648,GO:0043650,GO:0043933,GO:0044085,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0046218,GO:0046394,GO:0046395,GO:0046483,GO:0046496,GO:0046700,GO:0046874,GO:0046906,GO:0048037,GO:0051186,GO:0051188,GO:0051213,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055086,GO:0055114,GO:0065003,GO:0070189,GO:0071704,GO:0071840,GO:0072521,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:1901135,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606 1.13.11.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002186 383.0
DYD3_k127_6652276_8 Cysteine-rich domain K18928 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001902 358.0
DYD3_k127_6652276_9 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007177 326.0
DYD3_k127_6665164_0 NADH ubiquinone oxidoreductase, subunit G, iron-sulphur binding K00336 - 1.6.5.3 9.068e-303 949.0
DYD3_k127_6665164_1 Fumarate reductase flavoprotein C-term - - - 6.163e-250 785.0
DYD3_k127_6665164_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 327.0
DYD3_k127_6665164_11 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000266 317.0
DYD3_k127_6665164_12 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005188 308.0
DYD3_k127_6665164_13 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004303 305.0
DYD3_k127_6665164_14 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015 307.0
DYD3_k127_6665164_15 ubiE/COQ5 methyltransferase family K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000000005478 256.0
DYD3_k127_6665164_16 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000005101 254.0
DYD3_k127_6665164_17 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000008026 244.0
DYD3_k127_6665164_18 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000001095 245.0
DYD3_k127_6665164_19 glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000000000000000000000000000000006075 195.0
DYD3_k127_6665164_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 1.625e-237 739.0
DYD3_k127_6665164_20 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.000000000000000000000000000000000000000000006164 167.0
DYD3_k127_6665164_21 Regulatory protein ArsR K03892 - - 0.00000000000000000000000000000000004244 137.0
DYD3_k127_6665164_22 Preprotein translocase subunit SecG K03075 - - 0.000000000000000000000000000000001797 132.0
DYD3_k127_6665164_23 Fumarate reductase subunit C - - - 0.000000000000000000000000001003 119.0
DYD3_k127_6665164_24 Fumarate reductase subunit D - - - 0.00000000000000002832 91.0
DYD3_k127_6665164_3 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 6.102e-235 731.0
DYD3_k127_6665164_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 1.595e-230 720.0
DYD3_k127_6665164_5 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009123 608.0
DYD3_k127_6665164_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003007 528.0
DYD3_k127_6665164_7 dehydrogenase, E1 component K00161,K21416 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006958 448.0
DYD3_k127_6665164_8 PFAM Transketolase central region K00162,K21417 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003259 423.0
DYD3_k127_6665164_9 2Fe-2S iron-sulfur cluster binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 338.0
DYD3_k127_6667932_0 FAD dependent oxidoreductase - - - 2.92e-249 779.0
DYD3_k127_6667932_1 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00520,K21739 - 1.16.1.1 3.217e-210 661.0
DYD3_k127_6667932_2 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008691 358.0
DYD3_k127_6667932_3 Phospholipase A1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007169 339.0
DYD3_k127_6667932_4 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002666 315.0
DYD3_k127_6667932_5 Catalytic LigB subunit of aromatic ring-opening dioxygenase K15777 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001398 282.0
DYD3_k127_6667932_6 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000001136 213.0
DYD3_k127_6667932_7 DoxX K15977 - - 0.0000000000000000000000000000000000000000002986 162.0
DYD3_k127_6667932_8 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000003852 139.0
DYD3_k127_6680068_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 1.237e-198 625.0
DYD3_k127_6680068_1 Pyridine nucleotide-disulphide oxidoreductase K07222 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002115 435.0
DYD3_k127_6680068_10 KR domain - - - 0.000000000000000000003551 100.0
DYD3_k127_6680068_11 Pfam Adenylate and Guanylate cyclase catalytic domain - - - 0.00000000000004984 74.0
DYD3_k127_6680068_2 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004365 414.0
DYD3_k127_6680068_3 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002171 283.0
DYD3_k127_6680068_4 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.00000000000000000000000000000000000000000000000000000000004732 208.0
DYD3_k127_6680068_5 riboflavin synthase, alpha K00793 - 2.5.1.9 0.0000000000000000000000000000000000000000000000000000003053 217.0
DYD3_k127_6680068_6 PFAM DoxX family protein K15977 - - 0.00000000000000000000000000000000000000000004172 171.0
DYD3_k127_6680068_7 NmrA-like family K00329,K00356 - 1.6.5.3,1.6.99.3 0.000000000000000000000000000000000000000187 155.0
DYD3_k127_6680068_8 - - - - 0.000000000000000000000000000539 122.0
DYD3_k127_6680068_9 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.0000000000000000000003141 105.0
DYD3_k127_6707795_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 1.007e-229 717.0
DYD3_k127_6707795_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 549.0
DYD3_k127_6707795_10 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.000000000000000000000000000000000000000000000000000000000002205 210.0
DYD3_k127_6707795_11 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.0000000000000000000000000000000000000000000000000000000061 207.0
DYD3_k127_6707795_12 Ribosomal protein L17 K02879 - - 0.00000000000000000000000000000000000000000000000000000001514 201.0
DYD3_k127_6707795_13 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.000000000000000000000000000000000000000000000000000007593 192.0
DYD3_k127_6707795_14 binds to the 23S rRNA K02876 - - 0.00000000000000000000000000000000000000000000000000004308 192.0
DYD3_k127_6707795_15 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.00000000000000000000000000000000000000000000002897 179.0
DYD3_k127_6707795_16 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.00000000000000000000000000000000000000000000004174 171.0
DYD3_k127_6707795_17 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.00000000000000000000000000000000000000000001214 165.0
DYD3_k127_6707795_18 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.0000000000000000000000000000000000000197 146.0
DYD3_k127_6707795_19 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.000000000000000000000000000000000001803 141.0
DYD3_k127_6707795_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002975 344.0
DYD3_k127_6707795_20 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.00000000000000000000000000001398 123.0
DYD3_k127_6707795_21 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.00000000000000000006358 90.0
DYD3_k127_6707795_22 Ribosomal protein L30 K02907 - - 0.0000000000000001917 91.0
DYD3_k127_6707795_23 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.000000000002877 68.0
DYD3_k127_6707795_3 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001714 331.0
DYD3_k127_6707795_4 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003596 297.0
DYD3_k127_6707795_5 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001134 274.0
DYD3_k127_6707795_6 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004169 265.0
DYD3_k127_6707795_7 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.0000000000000000000000000000000000000000000000000000000000000000001995 231.0
DYD3_k127_6707795_8 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.000000000000000000000000000000000000000000000000000000000000000002587 231.0
DYD3_k127_6707795_9 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.0000000000000000000000000000000000000000000000000000000000000004845 223.0
DYD3_k127_6741095_0 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002542 587.0
DYD3_k127_6741095_1 Serine aminopeptidase, S33 K01253,K08253 - 2.7.10.2,3.3.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002883 580.0
DYD3_k127_6741095_10 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002658 392.0
DYD3_k127_6741095_11 PFAM sigma-54 factor interaction domain-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002737 387.0
DYD3_k127_6741095_12 TIGRFAM Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 379.0
DYD3_k127_6741095_13 ABC transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 380.0
DYD3_k127_6741095_14 abc transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 347.0
DYD3_k127_6741095_15 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002512 356.0
DYD3_k127_6741095_16 Imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005364 339.0
DYD3_k127_6741095_17 Transport permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 344.0
DYD3_k127_6741095_18 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001897 334.0
DYD3_k127_6741095_19 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 306.0
DYD3_k127_6741095_2 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004276 570.0
DYD3_k127_6741095_20 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000257 296.0
DYD3_k127_6741095_21 VacJ family lipoprotein K04754 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004801 276.0
DYD3_k127_6741095_22 PFAM Mammalian cell entry related domain protein K02067 - - 0.0000000000000000000000000000000000000000000000000000000000000001248 224.0
DYD3_k127_6741095_23 MlaC protein K07323 - - 0.0000000000000000000000000000000000000000000000000000000002854 214.0
DYD3_k127_6741095_24 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496,K11755 - 3.5.4.19,3.6.1.31 0.00000000000000000000000000000000000000000000000000000001514 200.0
DYD3_k127_6741095_25 Nucleotide transport and metabolism Carbohydrate transport and metabolism General function prediction only K02503 - - 0.00000000000000000000000000000000000000000007847 168.0
DYD3_k127_6741095_26 Phosphoribosyl-ATP K01523 - 3.6.1.31 0.00000000000000000000000000000000001426 143.0
DYD3_k127_6741095_27 Belongs to the BolA IbaG family - - - 0.00000000000000000000000000002454 119.0
DYD3_k127_6741095_28 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.0000000000000000000000000001823 119.0
DYD3_k127_6741095_29 ATPase activity, coupled to transmembrane movement of substances - - - 0.0000000000000000000000000492 118.0
DYD3_k127_6741095_3 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001976 547.0
DYD3_k127_6741095_30 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000000000000000002748 103.0
DYD3_k127_6741095_31 transporter antisigma-factor antagonist STAS K07122 - - 0.00000000000003673 83.0
DYD3_k127_6741095_4 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 462.0
DYD3_k127_6741095_5 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007569 438.0
DYD3_k127_6741095_6 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001597 430.0
DYD3_k127_6741095_7 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002027 433.0
DYD3_k127_6741095_8 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 412.0
DYD3_k127_6741095_9 ABC-type multidrug transport system, ATPase component K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006372 408.0
DYD3_k127_6749334_0 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00383 - 1.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002286 512.0
DYD3_k127_6749334_1 cyclopropane-fatty-acyl-phospholipid synthase K00574 - 2.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006047 465.0
DYD3_k127_6749334_2 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 476.0
DYD3_k127_6749334_3 PFAM short-chain dehydrogenase reductase SDR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003052 407.0
DYD3_k127_6773295_0 Penicillin amidase K01434 - 3.5.1.11 2.212e-279 879.0
DYD3_k127_6773295_1 Adenylate and Guanylate cyclase catalytic domain - - - 1.184e-260 844.0
DYD3_k127_6773295_2 PHB de-polymerase C-terminus K05973 - 3.1.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007253 547.0
DYD3_k127_6773295_3 AcrB/AcrD/AcrF family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003677 453.0
DYD3_k127_6773295_4 epimerase - - - 0.000000000000000000000000000000000000000000000000003263 188.0
DYD3_k127_6773295_5 Penicillin amidase K01434 - 3.5.1.11 0.000000000000672 73.0
DYD3_k127_6780332_0 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 1.152e-200 640.0
DYD3_k127_6780332_1 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004515 546.0
DYD3_k127_6780332_10 FecR protein - - - 0.00000000000000000000000006123 125.0
DYD3_k127_6780332_11 Domain of unknown function (DUF4440) - - - 0.000000000000000000002283 98.0
DYD3_k127_6780332_2 maleylacetate reductase K00217 - 1.3.1.32 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004559 438.0
DYD3_k127_6780332_3 Catechol dioxygenase N terminus K04098 - 1.13.11.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 332.0
DYD3_k127_6780332_4 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006142 347.0
DYD3_k127_6780332_5 Major Facilitator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005452 306.0
DYD3_k127_6780332_6 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000001036 233.0
DYD3_k127_6780332_7 Protein of unknown function (DUF560) - - - 0.000000000000000000000000000000000000000000000000000000000131 221.0
DYD3_k127_6780332_8 COG0834 ABC-type amino acid transport signal transduction systems periplasmic component domain K02030 - - 0.00000000000000000000000000000000000000000000000004052 187.0
DYD3_k127_6780332_9 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000000000000000000000000000003547 156.0
DYD3_k127_6870367_0 Ethylbenzene dehydrogenase - - - 3.425e-202 639.0
DYD3_k127_6870367_1 PFAM alanine racemase domain protein K20757 - 4.3.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000635 431.0
DYD3_k127_6870367_2 COG4664 TRAP-type mannitol chloroaromatic compound transport system, large permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005924 284.0
DYD3_k127_6870367_3 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000007173 216.0
DYD3_k127_6870367_4 3'-5' exonuclease - - - 0.00000000000000000000000000000000000000000000000001144 189.0
DYD3_k127_6870367_5 HD domain K07814,K13815 - - 0.00000000000000000000000000000000000000000000003018 181.0
DYD3_k127_6870367_6 PFAM sodium calcium exchanger K07301 - - 0.000000000000000000000000000000000000005047 159.0
DYD3_k127_6870367_7 - - - - 0.000000002297 63.0
DYD3_k127_6919429_0 Belongs to the TPP enzyme family K01652 - 2.2.1.6 5.355e-314 970.0
DYD3_k127_6919429_1 Histidine kinase-like ATPases - - - 9.2e-272 874.0
DYD3_k127_6919429_10 HupE / UreJ protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006728 254.0
DYD3_k127_6919429_11 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000002943 249.0
DYD3_k127_6919429_12 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000001898 201.0
DYD3_k127_6919429_13 AraC-like ligand binding domain - - - 0.000000000000000000000000000000000000000003224 167.0
DYD3_k127_6919429_14 phosphorelay signal transduction system K11443 - - 0.00000000000000000000000000000000000007309 145.0
DYD3_k127_6919429_15 - - - - 0.000000000000000000000000000000000000345 149.0
DYD3_k127_6919429_16 Endoribonuclease L-PSP K09022 - 3.5.99.10 0.0000000000000000000000000000000001878 137.0
DYD3_k127_6919429_17 Glutathione-dependent formaldehyde-activating enzyme - - - 0.000000000000000000000000000004578 128.0
DYD3_k127_6919429_18 - - - - 0.000000000000000000000000007016 112.0
DYD3_k127_6919429_19 - - - - 0.000000000000000000001182 103.0
DYD3_k127_6919429_2 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 584.0
DYD3_k127_6919429_20 Cupin 2, conserved barrel domain protein K21700 - - 0.0000007266 57.0
DYD3_k127_6919429_3 Acetamidase/Formamidase family K01455 - 3.5.1.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007894 584.0
DYD3_k127_6919429_4 Dienelactone hydrolase family K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 475.0
DYD3_k127_6919429_5 Benzoate membrane transport protein K05782 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003073 470.0
DYD3_k127_6919429_6 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003303 383.0
DYD3_k127_6919429_7 Protein of unknown function (DUF1445) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002837 370.0
DYD3_k127_6919429_8 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005516 344.0
DYD3_k127_6919429_9 Belongs to the enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009283 323.0
DYD3_k127_6922625_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1332.0
DYD3_k127_6922625_1 belongs to the aldehyde dehydrogenase family K00137 - 1.2.1.19 6.932e-238 756.0
DYD3_k127_6922625_10 molybdopterin-guanine dinucleotide biosynthesis protein K03753 - - 0.0000000000000000000000000000000000000000000000000000000000000002663 226.0
DYD3_k127_6922625_11 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.0000000000000000000000000000000000000000000003251 171.0
DYD3_k127_6922625_12 Uncharacterized ACR, COG1993 K09137 - - 0.0000000000000000000000000001049 118.0
DYD3_k127_6922625_13 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03636 - - 0.000000000000000000004857 107.0
DYD3_k127_6922625_2 Probable molybdopterin binding domain K03750 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006874 524.0
DYD3_k127_6922625_3 peptidase M24 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 506.0
DYD3_k127_6922625_4 Binding-protein-dependent transport system inner membrane component K02053 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005991 402.0
DYD3_k127_6922625_5 COG2998 ABC-type tungstate transport system, permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 368.0
DYD3_k127_6922625_6 ABC transporter K06857 - 3.6.3.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006304 301.0
DYD3_k127_6922625_7 PFAM binding-protein-dependent transport systems inner membrane component K05773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004279 258.0
DYD3_k127_6922625_8 MoaE protein K03635 - 2.8.1.12 0.0000000000000000000000000000000000000000000000000000000000000000003922 232.0
DYD3_k127_6946002_0 Bacterial DNA polymerase III alpha subunit K14162 - 2.7.7.7 0.0 1162.0
DYD3_k127_6946002_1 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 GO:0000183,GO:0001302,GO:0003674,GO:0003824,GO:0004516,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006139,GO:0006325,GO:0006342,GO:0006348,GO:0006355,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007568,GO:0007569,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016043,GO:0016458,GO:0016874,GO:0016879,GO:0018130,GO:0019219,GO:0019222,GO:0019357,GO:0019358,GO:0019362,GO:0019363,GO:0019365,GO:0019438,GO:0019637,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032502,GO:0034641,GO:0034654,GO:0040029,GO:0043094,GO:0043173,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0045814,GO:0045892,GO:0045934,GO:0046483,GO:0046497,GO:0048519,GO:0048523,GO:0048869,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051186,GO:0051188,GO:0051252,GO:0051253,GO:0051276,GO:0055086,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 6.3.4.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002626 558.0
DYD3_k127_6946002_10 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006519 271.0
DYD3_k127_6946002_11 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001528 272.0
DYD3_k127_6946002_12 Abc transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003357 278.0
DYD3_k127_6946002_13 Phenazine biosynthesis-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000209 263.0
DYD3_k127_6946002_14 Domain of unknown function (DUF3391) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006125 266.0
DYD3_k127_6946002_15 Periplasmic binding protein domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009412 273.0
DYD3_k127_6946002_16 Belongs to the SOS response-associated peptidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000002926 236.0
DYD3_k127_6946002_17 serine threonine protein kinase K11912,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000006237 246.0
DYD3_k127_6946002_18 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000002465 131.0
DYD3_k127_6946002_19 cheY-homologous receiver domain - - - 0.0000000000000000000000000001121 119.0
DYD3_k127_6946002_2 Acetyl-CoA hydrolase/transferase C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 444.0
DYD3_k127_6946002_20 COG0457 FOG TPR repeat - - - 0.00000000000000000000000005673 114.0
DYD3_k127_6946002_22 PFAM Hpt domain protein - - - 0.0000000000000002991 83.0
DYD3_k127_6946002_3 L-phenylalanine transmembrane transporter activity K01995,K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001902 404.0
DYD3_k127_6946002_4 Permeases of the major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003776 403.0
DYD3_k127_6946002_5 Belongs to the binding-protein-dependent transport system permease family K01997,K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002746 319.0
DYD3_k127_6946002_6 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K10715 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009915 302.0
DYD3_k127_6946002_7 NADH dehydrogenase NAD(P)H nitroreductase K09019 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004095 295.0
DYD3_k127_6946002_8 ABC transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008094 286.0
DYD3_k127_6946002_9 asparaginase K01424,K13051 GO:0003674,GO:0003824,GO:0004067,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008242,GO:0008798,GO:0010467,GO:0016485,GO:0016540,GO:0016787,GO:0016810,GO:0016811,GO:0019538,GO:0043170,GO:0044238,GO:0051604,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.19.5,3.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003009 285.0
DYD3_k127_6985314_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 2540.0
DYD3_k127_6985314_1 CoA-transferase family III K07749 - 2.8.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002266 548.0
DYD3_k127_6985314_2 serine protease K07403 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006942 511.0
DYD3_k127_6985314_3 Belongs to the DEAD box helicase family K11927 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008026,GO:0008104,GO:0008150,GO:0008186,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0033036,GO:0035770,GO:0036464,GO:0042623,GO:0043186,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044444,GO:0044464,GO:0045495,GO:0051179,GO:0060293,GO:0070035,GO:0140098,GO:1990904 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000047 280.0
DYD3_k127_6985314_4 ABC-type transport system involved in resistance to organic solvents, auxiliary component K07323 - - 0.000000000000000000000000000000000000000000000000001632 192.0
DYD3_k127_7055448_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1386.0
DYD3_k127_7055448_1 4Fe-4S dicluster domain - - - 0.0 1260.0
DYD3_k127_7055448_10 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001352 355.0
DYD3_k127_7055448_11 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007382 294.0
DYD3_k127_7055448_12 PFAM NAD-dependent epimerase dehydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004549 272.0
DYD3_k127_7055448_13 transmembrane transcriptional regulator (Anti-sigma factor) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001224 273.0
DYD3_k127_7055448_14 PFAM cytochrome c, class I - - - 0.00000000000000000000000000000000000000000000000000000000000000009355 231.0
DYD3_k127_7055448_15 Glyoxalase-like domain - - - 0.000000000000000000000000000000000000000000000000000000000002766 218.0
DYD3_k127_7055448_16 PFAM Bacterial protein of - - - 0.00000000000000000000000000000000000000000000000000000001161 205.0
DYD3_k127_7055448_17 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.0000000000000000000000000000000000000000000000000000006009 203.0
DYD3_k127_7055448_18 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000003116 186.0
DYD3_k127_7055448_19 protein involved in tolerance to divalent cations K03926 - - 0.000000000000000000000000000000000000000001902 158.0
DYD3_k127_7055448_2 penicillin-binding protein 1A K05366 - 2.4.1.129,3.4.16.4 2.796e-307 959.0
DYD3_k127_7055448_20 Belongs to the frataxin K06202 - - 0.000000000000000000000000000000001506 136.0
DYD3_k127_7055448_21 FCD - - - 0.000000000000000000000000000000002754 133.0
DYD3_k127_7055448_22 Cytochrome c K08738 - - 0.000000000000000000000000000002069 128.0
DYD3_k127_7055448_23 Type IV pilus assembly protein PilM K02662 - - 0.000003815 50.0
DYD3_k127_7055448_3 Belongs to the IlvD Edd family K01687 - 4.2.1.9 1.835e-274 853.0
DYD3_k127_7055448_4 Protein of unknown function, DUF255 K06888 - - 4.289e-260 818.0
DYD3_k127_7055448_5 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 1.627e-199 641.0
DYD3_k127_7055448_6 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007251 510.0
DYD3_k127_7055448_7 Belongs to the ALAD family K01698 GO:0003674,GO:0003824,GO:0004655,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.2.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000194 502.0
DYD3_k127_7055448_8 Oxidoreductase FAD-binding domain K00523 - 1.17.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002631 499.0
DYD3_k127_7055448_9 NYN domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005596 410.0
DYD3_k127_70859_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 4.177e-288 901.0
DYD3_k127_70859_1 formate hydrogenlyase subunit 3 multisubunit Na H antiporter, MnhD subunit K05568,K12137 - - 5.324e-236 742.0
DYD3_k127_70859_10 Amidase K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000639 527.0
DYD3_k127_70859_11 Substrate binding domain of ABC-type glycine betaine transport system K05845,K05846 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002575 542.0
DYD3_k127_70859_12 STAS domain K03321 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 487.0
DYD3_k127_70859_13 NAD(P) transhydrogenase, alpha subunit K00324 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005215 479.0
DYD3_k127_70859_14 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002736 454.0
DYD3_k127_70859_15 FAD binding domain K11472 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001921 441.0
DYD3_k127_70859_16 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 421.0
DYD3_k127_70859_17 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005982 391.0
DYD3_k127_70859_18 Including yeast histone deacetylase and acetoin utilization protein K04768 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000474 369.0
DYD3_k127_70859_19 peptidase C26 K01658,K07010 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002668 358.0
DYD3_k127_70859_2 Glycolate oxidase subunit GlcD K00104 - 1.1.3.15 1.133e-224 707.0
DYD3_k127_70859_20 Belongs to the hyi family K01816 - 5.3.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007708 335.0
DYD3_k127_70859_21 Sodium/hydrogen exchanger family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004282 278.0
DYD3_k127_70859_22 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005883 252.0
DYD3_k127_70859_23 SMART PAS domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003452 270.0
DYD3_k127_70859_24 Na H antiporter, MnhB K05566 - - 0.0000000000000000000000000000000000000000000000000000000000001674 223.0
DYD3_k127_70859_25 LUD domain K00782 - - 0.0000000000000000000000000000000000000000000000000000000000007001 236.0
DYD3_k127_70859_26 Na H antiporter, MnhB K05566 - - 0.00000000000000000000000000000000000000000000000000000000002463 217.0
DYD3_k127_70859_27 COG1863 Multisubunit Na H antiporter MnhE subunit K05569 - - 0.000000000000000000000000000000000000000000000000002533 186.0
DYD3_k127_70859_28 Protein of unknown function (DUF3025) - - - 0.000000000000000000000000000000000000000000000000005328 201.0
DYD3_k127_70859_29 COG1006 Multisubunit Na H antiporter, MnhC subunit K05567 - - 0.000000000000000000000000000000000000000000001261 171.0
DYD3_k127_70859_3 Proton-conducting membrane transporter - - - 3.739e-213 677.0
DYD3_k127_70859_30 4TM region of pyridine nucleotide transhydrogenase, mitoch K00322,K00324 - 1.6.1.1,1.6.1.2 0.00000000000000000000000000000000000001442 147.0
DYD3_k127_70859_31 Multiple resistance and pH regulation protein F (MrpF / PhaF) K05570 - - 0.000000000000000000000000000001248 123.0
DYD3_k127_70859_32 monovalent cation:proton antiporter activity K05571 - - 0.000000000000000000000000000006822 128.0
DYD3_k127_70859_33 - - - - 0.0000000000000000000000001702 111.0
DYD3_k127_70859_34 HWE histidine kinase - - - 0.000001877 58.0
DYD3_k127_70859_35 - - - - 0.00002037 54.0
DYD3_k127_70859_36 - - - - 0.0003129 47.0
DYD3_k127_70859_4 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 1.591e-204 645.0
DYD3_k127_70859_5 COG1132 ABC-type multidrug transport system, ATPase and permease components K06147 - - 5.938e-201 647.0
DYD3_k127_70859_6 COG4664 TRAP-type mannitol chloroaromatic compound transport system, large permease component - - - 3.771e-194 616.0
DYD3_k127_70859_7 glycolate oxidase iron-sulfur subunit K11473 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 582.0
DYD3_k127_70859_8 COG0471 Di- and tricarboxylate transporters - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 576.0
DYD3_k127_70859_9 Proton-conducting membrane transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 571.0
DYD3_k127_7088087_0 PFAM AMP-dependent synthetase and ligase K12508 - 6.2.1.34 1.889e-232 734.0
DYD3_k127_7088087_1 PFAM Uncharacterised protein family UPF0027 K14415 - 6.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004053 585.0
DYD3_k127_7088087_10 Metal dependent phosphohydrolases with conserved 'HD' motif. K07814 - - 0.00000000000000000000001133 105.0
DYD3_k127_7088087_11 Domain of unknown function DUF302 - - - 0.00000000000000002487 88.0
DYD3_k127_7088087_12 (Lipo)protein - - - 0.00000000000002143 80.0
DYD3_k127_7088087_13 (Lipo)protein - - - 0.00000000000003223 81.0
DYD3_k127_7088087_14 Branched-chain amino acid transport system / permease component - - - 0.0000001528 65.0
DYD3_k127_7088087_2 Protein of unknown function (DUF521) K09123 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000339 533.0
DYD3_k127_7088087_3 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 441.0
DYD3_k127_7088087_4 Branched-chain amino acid transport system / permease component K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002056 350.0
DYD3_k127_7088087_5 Thioredoxin K05838 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009148 264.0
DYD3_k127_7088087_6 catechol 1,2-dioxygenase - - - 0.0000000000000000000000000000000000000000000000000000000004245 214.0
DYD3_k127_7088087_7 Protein of unknown function DUF126 K09128 - - 0.0000000000000000000000000000000000000000000000000000000008168 213.0
DYD3_k127_7088087_8 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.00000000000000000000000000000000000000000000000000000000178 201.0
DYD3_k127_7088087_9 Thioesterase superfamily - - - 0.000000000000000000000000000000000000000009648 157.0
DYD3_k127_7194551_0 Cys/Met metabolism PLP-dependent enzyme K01740 - 2.5.1.49 2.533e-211 666.0
DYD3_k127_7194551_1 Adenylate cyclase K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005138 441.0
DYD3_k127_7194551_10 - - - - 0.00000000000000000000000000000000000000000000001358 178.0
DYD3_k127_7194551_11 Protein chain release factor B K15034 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0003824,GO:0004045,GO:0005488,GO:0006412,GO:0006414,GO:0006415,GO:0006417,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016043,GO:0016150,GO:0016787,GO:0016788,GO:0019222,GO:0019538,GO:0022411,GO:0031323,GO:0031326,GO:0032268,GO:0032984,GO:0034248,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044877,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0052689,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0072344,GO:0080090,GO:0097159,GO:0140098,GO:0140101,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2000112 - 0.000000000000000000000000000000000000000000001164 169.0
DYD3_k127_7194551_12 - - - - 0.000000000000000000000000000000000000000004181 162.0
DYD3_k127_7194551_13 Transposase K07483 - - 0.0000000000001316 74.0
DYD3_k127_7194551_14 Protein of unknown function (DUF3567) - - - 0.00000000000104 70.0
DYD3_k127_7194551_2 Amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004779 359.0
DYD3_k127_7194551_3 type I phosphodiesterase nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003283 314.0
DYD3_k127_7194551_4 MatE - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003136 282.0
DYD3_k127_7194551_5 Alpha/beta hydrolase family K01055 - 3.1.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001954 292.0
DYD3_k127_7194551_6 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004031 272.0
DYD3_k127_7194551_7 ABC transporter substrate binding protein K01989 - - 0.000000000000000000000000000000000000000000000000000000000000001711 231.0
DYD3_k127_7194551_8 Methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000001753 206.0
DYD3_k127_7194551_9 DinB family - - - 0.000000000000000000000000000000000000000000000000000002049 195.0
DYD3_k127_752743_0 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 3.525e-218 692.0
DYD3_k127_752743_1 Creatinase/Prolidase N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007867 555.0
DYD3_k127_752743_10 phosphate transport regulator K07220 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009016 269.0
DYD3_k127_752743_11 Acetyltransferase (GNAT) domain K03823 - 2.3.1.183 0.0000000000000000000000000000000000000000000000000000000001753 209.0
DYD3_k127_752743_12 Cupin domain - - - 0.0000000000000000000000000000000004027 133.0
DYD3_k127_752743_13 protein conserved in bacteria K09796 - - 0.000000000000000000000000000000000621 139.0
DYD3_k127_752743_14 SmpA / OmlA family - - - 0.000000000000326 73.0
DYD3_k127_752743_2 Belongs to the thiolase family K07550 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004228 544.0
DYD3_k127_752743_3 PFAM L-carnitine dehydratase bile acid-inducible protein F K01796 - 5.1.99.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001597 533.0
DYD3_k127_752743_4 Phosphate transporter K03306 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 509.0
DYD3_k127_752743_5 PFAM Alcohol dehydrogenase zinc-binding domain protein K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005854 466.0
DYD3_k127_752743_6 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K01781,K20023 - 4.2.1.156,4.2.1.42,5.1.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000327 452.0
DYD3_k127_752743_7 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007437 388.0
DYD3_k127_752743_8 Glutathione S-transferase, N-terminal domain K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005273 300.0
DYD3_k127_752743_9 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002848 283.0
DYD3_k127_816218_0 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002108 613.0
DYD3_k127_816218_1 Glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005704 499.0
DYD3_k127_816218_10 Protein of unknown function DUF45 K07043 - - 0.00000000000000000000000000000000000000000001054 175.0
DYD3_k127_816218_11 Uncharacterized protein family UPF0054 K07042 - - 0.00000000000000000000000000000000007983 136.0
DYD3_k127_816218_2 Carbon-nitrogen hydrolase K03820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 478.0
DYD3_k127_816218_3 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006348 442.0
DYD3_k127_816218_4 Mg2 and Co2 transporter CorC K06189 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000636 390.0
DYD3_k127_816218_5 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 - 1.1.1.262 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005504 381.0
DYD3_k127_816218_6 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003391 299.0
DYD3_k127_816218_7 Phosphate acyltransferases K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006251 305.0
DYD3_k127_816218_8 D,D-heptose 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.0000000000000000000000000000000000000000000000000000000000000000000000003217 251.0
DYD3_k127_816218_9 Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione K01759 - 4.4.1.5 0.00000000000000000000000000000000000000000000000000000000001431 211.0
DYD3_k127_844441_0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005128 462.0
DYD3_k127_844441_1 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 354.0
DYD3_k127_844441_2 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006036 276.0
DYD3_k127_844441_3 Adenylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006139 272.0
DYD3_k127_844441_4 TIGRFAM polymorphic outer membrane protein K21449 - - 0.00000000000000000000000000000000983 139.0
DYD3_k127_844441_5 PFAM acyl-CoA dehydrogenase domain protein K00249 - 1.3.8.7 0.00000000000000000003283 89.0
DYD3_k127_889326_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.0 1004.0
DYD3_k127_889326_1 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 3.852e-320 995.0
DYD3_k127_889326_10 Phenylacetic acid catabolic protein K02611 - 1.14.13.149 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005012 294.0
DYD3_k127_889326_11 Mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000291 290.0
DYD3_k127_889326_12 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004494 287.0
DYD3_k127_889326_13 Belongs to the MtfA family K09933 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002766 283.0
DYD3_k127_889326_14 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003022 256.0
DYD3_k127_889326_15 Belongs to the UPF0312 family - - - 0.000000000000000000000000000000000000000000000000000000004394 206.0
DYD3_k127_889326_16 Iron-sulfur cluster assembly protein K02612 - - 0.000000000000000000000000000000000000000000000000000004117 195.0
DYD3_k127_889326_17 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.000000000000000000000000000000000000000000000000000007031 191.0
DYD3_k127_889326_18 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000011 199.0
DYD3_k127_889326_19 Belongs to the UPF0312 family - - - 0.000000000000000000000000000000000000000000000002022 184.0
DYD3_k127_889326_2 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 - 6.1.1.20 1.35e-282 884.0
DYD3_k127_889326_20 phosphohistidine phosphatase K08296 - - 0.000000000000000000000000000000000000000009268 159.0
DYD3_k127_889326_21 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.000000000000000000000000000000000000001511 150.0
DYD3_k127_889326_22 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.000000000000000004397 86.0
DYD3_k127_889326_23 Mechanosensitive ion channel - - - 0.0000004301 54.0
DYD3_k127_889326_3 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 1.448e-254 810.0
DYD3_k127_889326_4 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004723 549.0
DYD3_k127_889326_5 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 538.0
DYD3_k127_889326_6 COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 K02613 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 453.0
DYD3_k127_889326_7 Exopolyphosphatase K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003504 347.0
DYD3_k127_889326_8 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002073 312.0
DYD3_k127_889326_9 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 309.0
DYD3_k127_914089_0 B12 binding domain K00548 - 2.1.1.13 0.0 1515.0
DYD3_k127_914089_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1217.0
DYD3_k127_914089_10 Mg chelatase subunit ChlI K07391 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 599.0
DYD3_k127_914089_11 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003819 579.0
DYD3_k127_914089_12 Ammonium Transporter K03320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003766 562.0
DYD3_k127_914089_13 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 511.0
DYD3_k127_914089_14 Biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002734 484.0
DYD3_k127_914089_15 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008181 453.0
DYD3_k127_914089_16 pfkB family carbohydrate kinase K00852,K00856 - 2.7.1.15,2.7.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001843 437.0
DYD3_k127_914089_17 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 430.0
DYD3_k127_914089_18 Sigma-54 interaction domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002312 414.0
DYD3_k127_914089_19 DNA protecting protein DprA K04096 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 383.0
DYD3_k127_914089_2 dna topoisomerase III K03169 - 5.99.1.2 0.0 1108.0
DYD3_k127_914089_20 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase K05921,K18336 - 4.1.1.68 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001764 362.0
DYD3_k127_914089_21 oxidoreductase FAD NAD(P)-binding domain protein K14581 - 1.18.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001966 364.0
DYD3_k127_914089_22 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001889 359.0
DYD3_k127_914089_23 Bacterial protein of unknown function (Gcw_chp) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002901 345.0
DYD3_k127_914089_24 PFAM Peptidoglycan-binding LysM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007145 345.0
DYD3_k127_914089_25 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 337.0
DYD3_k127_914089_26 Protocatechuate 3,4-dioxygenase beta subunit N terminal K00449 - 1.13.11.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003581 333.0
DYD3_k127_914089_27 Belongs to the ParB family K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004752 336.0
DYD3_k127_914089_28 AMP-binding enzyme C-terminal domain K04110,K20458 - 6.2.1.25,6.2.1.27,6.2.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004744 341.0
DYD3_k127_914089_29 AMP-binding enzyme C-terminal domain K04110,K20458 - 6.2.1.25,6.2.1.27,6.2.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002261 337.0
DYD3_k127_914089_3 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 2.208e-307 954.0
DYD3_k127_914089_30 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003043 327.0
DYD3_k127_914089_31 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 - 3.6.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004042 325.0
DYD3_k127_914089_32 Phenylacetic acid catabolic protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002669 312.0
DYD3_k127_914089_33 maleylacetoacetate isomerase K01800,K01801 - 5.2.1.2,5.2.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001602 291.0
DYD3_k127_914089_34 COG0179 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) K16165 - 3.7.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001841 286.0
DYD3_k127_914089_35 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008602 287.0
DYD3_k127_914089_36 Ribosomal protein L11 methyltransferase (PrmA) K02687 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001028 281.0
DYD3_k127_914089_37 Catalyzes the S-adenosylmethionine monomethyl esterification of trans-aconitate K00598 - 2.1.1.144 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003483 289.0
DYD3_k127_914089_38 Pfam:AmoA K07120 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006043 270.0
DYD3_k127_914089_39 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000000000000000000000000000000006946 223.0
DYD3_k127_914089_4 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 - 4.1.1.32 1.387e-286 891.0
DYD3_k127_914089_40 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.000000000000000000000000000000000000000000000000000000000000001181 229.0
DYD3_k127_914089_41 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000000000000000000000004674 213.0
DYD3_k127_914089_42 Belongs to the P(II) protein family K04752 - - 0.0000000000000000000000000000000000000000000000000000000001297 205.0
DYD3_k127_914089_43 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase - - - 0.0000000000000000000000000000000000000000000000000001329 193.0
DYD3_k127_914089_44 Glycine zipper 2TM domain - - - 0.0000000000000000000000000000000000000000000000004351 181.0
DYD3_k127_914089_45 Domain of unknown function (DUF4390) - - - 0.00000000000000000000000000000000000000000000000757 181.0
DYD3_k127_914089_46 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases K02503 - - 0.0000000000000000000000000000000000000000000001685 173.0
DYD3_k127_914089_47 Dioxygenase K00448 - 1.13.11.3 0.00000000000000000000000000000000000000000002831 172.0
DYD3_k127_914089_48 TIGRFAM MJ0042 family finger-like protein - - - 0.00000000000000000000000000000000000000002933 169.0
DYD3_k127_914089_49 Belongs to the Smg family K03747 - - 0.0000000000000000000000000000009292 126.0
DYD3_k127_914089_5 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation - - - 4.788e-223 720.0
DYD3_k127_914089_50 Protein of unknown function (DUF423) - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000002564 123.0
DYD3_k127_914089_51 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000000000000005867 109.0
DYD3_k127_914089_52 Thioesterase superfamily - - - 0.0000000000000000000000001772 111.0
DYD3_k127_914089_53 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000000003194 111.0
DYD3_k127_914089_54 Membrane fusogenic activity K09806 - - 0.0000000000000001033 83.0
DYD3_k127_914089_55 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.0000000000002427 71.0
DYD3_k127_914089_56 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 GO:0000966,GO:0001682,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004526,GO:0004540,GO:0004549,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005655,GO:0005730,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0030677,GO:0030681,GO:0031974,GO:0031981,GO:0032991,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0099116,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1902555,GO:1905348,GO:1990904 3.1.26.5 0.000000008064 61.0
DYD3_k127_914089_57 Cobalamin synthesis protein - - - 0.0000002137 58.0
DYD3_k127_914089_58 ATP synthase I chain K02116 - - 0.0006503 50.0
DYD3_k127_914089_6 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family - - - 1.147e-196 624.0
DYD3_k127_914089_7 PFAM TrkA-N domain protein K03499 - - 2.865e-196 621.0
DYD3_k127_914089_8 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002583 605.0
DYD3_k127_914089_9 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007361 609.0
DYD3_k127_931031_0 Atp-dependent helicase K03578 - 3.6.4.13 0.0 1430.0
DYD3_k127_931031_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 0.0 1242.0
DYD3_k127_931031_10 modulator of DNA gyrase K03592 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002074 556.0
DYD3_k127_931031_11 sulfide dehydrogenase K05301 - 1.8.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 501.0
DYD3_k127_931031_12 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001793 474.0
DYD3_k127_931031_13 Aminotransferase class-V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005679 462.0
DYD3_k127_931031_14 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005313 450.0
DYD3_k127_931031_15 AAA domain (dynein-related subfamily) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004081 444.0
DYD3_k127_931031_16 VWA domain containing CoxE-like protein K07161 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006979 441.0
DYD3_k127_931031_17 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0031974,GO:0031981,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:1901360 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007287 435.0
DYD3_k127_931031_18 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006317 433.0
DYD3_k127_931031_19 XdhC and CoxI family K07402 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008729 422.0
DYD3_k127_931031_2 FAD linked oxidase domain protein K06911 - - 0.0 1229.0
DYD3_k127_931031_20 Malonyl-CoA decarboxylase K01578 - 4.1.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002364 420.0
DYD3_k127_931031_21 Cytochrome P450 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004082 411.0
DYD3_k127_931031_22 ATP ADP translocase K03301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005838 397.0
DYD3_k127_931031_23 COG0501 Zn-dependent protease with chaperone function K03799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 400.0
DYD3_k127_931031_24 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003155 389.0
DYD3_k127_931031_25 luciferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006653 372.0
DYD3_k127_931031_26 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002961 355.0
DYD3_k127_931031_27 Integral membrane protein TerC family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007953 340.0
DYD3_k127_931031_28 Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon K01894 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001627 341.0
DYD3_k127_931031_29 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008701 331.0
DYD3_k127_931031_3 AcrB/AcrD/AcrF family - - - 0.0 1208.0
DYD3_k127_931031_30 PFAM Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001613 318.0
DYD3_k127_931031_31 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003666 328.0
DYD3_k127_931031_32 Molybdenum cofactor biosynthesis protein K03831 - 2.7.7.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001982 301.0
DYD3_k127_931031_33 Probable molybdopterin binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001973 292.0
DYD3_k127_931031_34 RadC-like JAB domain K03630 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000822 278.0
DYD3_k127_931031_35 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001393 261.0
DYD3_k127_931031_36 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000001322 258.0
DYD3_k127_931031_37 metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain K07050 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001646 261.0
DYD3_k127_931031_38 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001054 267.0
DYD3_k127_931031_39 Glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003315 242.0
DYD3_k127_931031_4 TIGRFAM ATP-dependent Clp protease ATP-binding subunit clpA K03694 - - 0.0 1184.0
DYD3_k127_931031_40 Acetyltransferase (GNAT) domain K03823 - 2.3.1.183 0.00000000000000000000000000000000000000000000000000000000000000000001251 241.0
DYD3_k127_931031_41 riboflavin synthase alpha K00793 - 2.5.1.9 0.00000000000000000000000000000000000000000000000000000000000000000003914 236.0
DYD3_k127_931031_42 Ferritin-like domain K04047 - - 0.00000000000000000000000000000000000000000000000000000000000000000007756 234.0
DYD3_k127_931031_43 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000006156 239.0
DYD3_k127_931031_44 2Fe-2S -binding domain protein K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000008537 239.0
DYD3_k127_931031_45 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.000000000000000000000000000000000000000000000000000000000000000001425 229.0
DYD3_k127_931031_46 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000001703 235.0
DYD3_k127_931031_47 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.000000000000000000000000000000000000000000000000000000000001841 212.0
DYD3_k127_931031_48 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000000000000001997 218.0
DYD3_k127_931031_49 DSBA-like thioredoxin domain - - - 0.0000000000000000000000000000000000000000000000000000000341 205.0
DYD3_k127_931031_5 PFAM AMP-dependent synthetase and ligase K01895 - 6.2.1.1 2.152e-222 700.0
DYD3_k127_931031_50 Putative transposase - - - 0.00000000000000000000000000000000000000000000000000000006111 199.0
DYD3_k127_931031_51 Phasin protein - - - 0.00000000000000000000000000000000000000000000000000001798 194.0
DYD3_k127_931031_52 Belongs to the thioredoxin family K03671 - - 0.00000000000000000000000000000000000000000000000000004512 198.0
DYD3_k127_931031_53 TraB family K09973 - - 0.00000000000000000000000000000000000000000000000000004929 199.0
DYD3_k127_931031_54 carbon monoxide dehydrogenase K09386 - - 0.000000000000000000000000000000000000000000000000007681 185.0
DYD3_k127_931031_55 Staphylococcal nuclease homologues - - - 0.00000000000000000000000000000000000000000000000006693 184.0
DYD3_k127_931031_56 Protein of unknown function (DUF3237) - - - 0.0000000000000000000000000000000000000000000000003176 181.0
DYD3_k127_931031_57 Molybdopterin-guanine dinucleotide biosynthesis protein MobA K07141 - 2.7.7.76 0.0000000000000000000000000000000000000000000000003388 181.0
DYD3_k127_931031_58 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.00000000000000000000000000000000000000000005905 161.0
DYD3_k127_931031_59 Etoposide-induced protein 2.4 (EI24) - - - 0.0000000000000000000000000000000000000000006885 169.0
DYD3_k127_931031_6 COG0010 Arginase agmatinase formimionoglutamate hydrolase, arginase family K00819 - 2.6.1.13 3.338e-215 695.0
DYD3_k127_931031_60 peptidylprolyl isomerase K03769 - 5.2.1.8 0.0000000000000000000000000000000000000006874 153.0
DYD3_k127_931031_61 Belongs to the UPF0307 family K09889 - - 0.0000000000000000000000000000000000003568 162.0
DYD3_k127_931031_62 Uncharacterized protein conserved in bacteria (DUF2062) K09928 - - 0.000000000000000000000000000000000002593 145.0
DYD3_k127_931031_63 Cold shock K03704 - - 0.00000000000000000000000000000000001798 138.0
DYD3_k127_931031_64 GYD domain - - - 0.000000000000000000000000000002257 123.0
DYD3_k127_931031_65 transcriptional regulator - - - 0.00000000000000000000000000001289 126.0
DYD3_k127_931031_66 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.00000000000000000000000000001978 129.0
DYD3_k127_931031_67 Cytochrome c, class I - - - 0.000000000000000000000002242 110.0
DYD3_k127_931031_68 SPW repeat - - - 0.0000000000000000000005467 99.0
DYD3_k127_931031_69 Protein of unknown function (DUF3108) - - - 0.000000000000000000007791 104.0
DYD3_k127_931031_7 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 9.489e-215 674.0
DYD3_k127_931031_70 Ribosomal protein L33 K02913 - - 0.00000000000000000003638 92.0
DYD3_k127_931031_71 Notch homolog K02599,K20994 GO:0000003,GO:0000122,GO:0000139,GO:0000278,GO:0000578,GO:0000902,GO:0000904,GO:0000976,GO:0000977,GO:0000978,GO:0000987,GO:0000988,GO:0000989,GO:0001012,GO:0001067,GO:0001076,GO:0001190,GO:0001503,GO:0001525,GO:0001568,GO:0001570,GO:0001649,GO:0001654,GO:0001655,GO:0001666,GO:0001667,GO:0001669,GO:0001700,GO:0001701,GO:0001708,GO:0001709,GO:0001726,GO:0001736,GO:0001738,GO:0001745,GO:0001751,GO:0001752,GO:0001754,GO:0001756,GO:0001763,GO:0001816,GO:0001822,GO:0001837,GO:0001840,GO:0001889,GO:0001894,GO:0001932,GO:0001933,GO:0001934,GO:0001942,GO:0001944,GO:0001947,GO:0002009,GO:0002011,GO:0002040,GO:0002051,GO:0002052,GO:0002064,GO:0002065,GO:0002066,GO:0002067,GO:0002085,GO:0002164,GO:0002165,GO:0002193,GO:0002213,GO:0002237,GO:0002244,GO:0002376,GO:0002437,GO:0002520,GO:0002682,GO:0002683,GO:0002684,GO:0002790,GO:0003002,GO:0003006,GO:0003007,GO:0003008,GO:0003143,GO:0003151,GO:0003156,GO:0003157,GO:0003158,GO:0003160,GO:0003161,GO:0003162,GO:0003169,GO:0003170,GO:0003171,GO:0003174,GO:0003176,GO:0003177,GO:0003178,GO:0003179,GO:0003180,GO:0003181,GO:0003182,GO:0003183,GO:0003184,GO:0003188,GO:0003190,GO:0003192,GO:0003197,GO:0003198,GO:0003203,GO:0003205,GO:0003206,GO:0003207,GO:0003208,GO:0003209,GO:0003211,GO:0003213,GO:0003214,GO:0003215,GO:0003219,GO:0003222,GO:0003229,GO:0003230,GO:0003231,GO:0003241,GO:0003250,GO:0003252,GO:0003256,GO:0003264,GO:0003266,GO:0003270,GO:0003272,GO:0003273,GO:0003279,GO:0003281,GO:0003330,GO:0003332,GO:0003344,GO:0003348,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003690,GO:0003700,GO:0004857,GO:0004888,GO:0005102,GO:0005112,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005768,GO:0005770,GO:0005783,GO:0005789,GO:0005794,GO:0005796,GO:0005829,GO:0005856,GO:0005886,GO:0005887,GO:0005911,GO:0005912,GO:0006109,GO:0006110,GO:0006139,GO:0006140,GO:0006351,GO:0006352,GO:0006355,GO:0006357,GO:0006366,GO:0006367,GO:0006725,GO:0006807,GO:0006810,GO:0006915,GO:0006928,GO:0006935,GO:0006950,GO:0006952,GO:0006954,GO:0006955,GO:0006959,GO:0006996,GO:0007010,GO:0007015,GO:0007049,GO:0007050,GO:0007154,GO:0007155,GO:0007157,GO:0007162,GO:0007163,GO:0007164,GO:0007165,GO:0007166,GO:0007219,GO:0007221,GO:0007267,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007292,GO:0007293,GO:0007297,GO:0007298,GO:0007304,GO:0007306,GO:0007308,GO:0007309,GO:0007314,GO:0007346,GO:0007350,GO:0007351,GO:0007368,GO:0007386,GO:0007389,GO:0007391,GO:0007398,GO:0007399,GO:0007400,GO:0007403,GO:0007405,GO:0007409,GO:0007411,GO:0007417,GO:0007419,GO:0007420,GO:0007422,GO:0007423,GO:0007424,GO:0007440,GO:0007442,GO:0007443,GO:0007444,GO:0007446,GO:0007447,GO:0007449,GO:0007450,GO:0007451,GO:0007455,GO:0007460,GO:0007464,GO:0007472,GO:0007473,GO:0007474,GO:0007476,GO:0007478,GO:0007480,GO:0007483,GO:0007484,GO:0007485,GO:0007492,GO:0007498,GO:0007507,GO:0007517,GO:0007519,GO:0007521,GO:0007548,GO:0007552,GO:0007560,GO:0007568,GO:0007610,GO:0007611,GO:0007613,GO:0007616,GO:0008045,GO:0008052,GO:0008104,GO:0008150,GO:0008152,GO:0008219,GO:0008283,GO:0008284,GO:0008285,GO:0008340,GO:0008347,GO:0008356,GO:0008358,GO:0008407,GO:0008544,GO:0008587,GO:0008593,GO:0008595,GO:0009058,GO:0009059,GO:0009306,GO:0009605,GO:0009607,GO:0009608,GO:0009611,GO:0009617,GO:0009628,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009791,GO:0009792,GO:0009798,GO:0009799,GO:0009855,GO:0009880,GO:0009886,GO:0009887,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009912,GO:0009913,GO:0009948,GO:0009950,GO:0009952,GO:0009953,GO:0009954,GO:0009966,GO:0009967,GO:0009968,GO:0009986,GO:0009987,GO:0009994,GO:0009996,GO:0010001,GO:0010002,GO:0010033,GO:0010160,GO:0010243,GO:0010259,GO:0010453,GO:0010454,GO:0010455,GO:0010467,GO:0010468,GO:0010470,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010563,GO:0010564,GO:0010594,GO:0010596,GO:0010604,GO:0010605,GO:0010611,GO:0010614,GO:0010623,GO:0010628,GO:0010629,GO:0010631,GO:0010632,GO:0010633,GO:0010646,GO:0010647,GO:0010648,GO:0010717,GO:0010718,GO:0010720,GO:0010721,GO:0010810,GO:0010812,GO:0010830,GO:0010832,GO:0010927,GO:0010941,GO:0010942,GO:0012501,GO:0012505,GO:0014013,GO:0014014,GO:0014015,GO:0014016,GO:0014017,GO:0014019,GO:0014031,GO:0014070,GO:0014706,GO:0014741,GO:0014743,GO:0014807,GO:0014855,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016070,GO:0016202,GO:0016324,GO:0016330,GO:0016331,GO:0016333,GO:0016348,GO:0016360,GO:0016477,GO:0016525,GO:0017145,GO:0017157,GO:0017158,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019827,GO:0019899,GO:0019953,GO:0021510,GO:0021514,GO:0021515,GO:0021517,GO:0021522,GO:0021523,GO:0021531,GO:0021536,GO:0021538,GO:0021700,GO:0021781,GO:0021915,GO:0021953,GO:0021986,GO:0022008,GO:0022402,GO:0022404,GO:0022405,GO:0022407,GO:0022408,GO:0022412,GO:0022414,GO:0022416,GO:0022603,GO:0022607,GO:0022610,GO:0022612,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030027,GO:0030029,GO:0030030,GO:0030031,GO:0030036,GO:0030054,GO:0030097,GO:0030100,GO:0030111,GO:0030139,GO:0030141,GO:0030154,GO:0030155,GO:0030178,GO:0030182,GO:0030216,GO:0030234,GO:0030278,GO:0030279,GO:0030323,GO:0030324,GO:0030326,GO:0030334,GO:0030335,GO:0030336,GO:0030510,GO:0030513,GO:0030514,GO:0030539,GO:0030703,GO:0030707,GO:0030708,GO:0030713,GO:0030718,GO:0030720,GO:0030808,GO:0030811,GO:0030850,GO:0030855,GO:0030856,GO:0030857,GO:0030858,GO:0030900,GO:0031016,GO:0031017,GO:0031069,GO:0031090,GO:0031099,GO:0031100,GO:0031175,GO:0031224,GO:0031226,GO:0031252,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031329,GO:0031344,GO:0031399,GO:0031400,GO:0031401,GO:0031410,GO:0031490,GO:0031960,GO:0031974,GO:0031981,GO:0031982,GO:0031984,GO:0032101,GO:0032102,GO:0032268,GO:0032269,GO:0032270,GO:0032354,GO:0032495,GO:0032496,GO:0032501,GO:0032502,GO:0032504,GO:0032633,GO:0032774,GO:0032835,GO:0032870,GO:0032872,GO:0032873,GO:0032879,GO:0032940,GO:0032989,GO:0032990,GO:0032991,GO:0033002,GO:0033036,GO:0033554,GO:0033993,GO:0034641,GO:0034645,GO:0034654,GO:0034698,GO:0035003,GO:0035050,GO:0035051,GO:0035107,GO:0035108,GO:0035112,GO:0035113,GO:0035114,GO:0035116,GO:0035120,GO:0035126,GO:0035137,GO:0035148,GO:0035153,GO:0035155,GO:0035157,GO:0035161,GO:0035162,GO:0035163,GO:0035165,GO:0035166,GO:0035167,GO:0035168,GO:0035170,GO:0035171,GO:0035172,GO:0035203,GO:0035204,GO:0035214,GO:0035215,GO:0035218,GO:0035220,GO:0035222,GO:0035239,GO:0035265,GO:0035272,GO:0035282,GO:0035285,GO:0035295,GO:0035315,GO:0035850,GO:0035886,GO:0035904,GO:0035907,GO:0035914,GO:0035924,GO:0036003,GO:0036011,GO:0036099,GO:0036293,GO:0036294,GO:0036335,GO:0038023,GO:0040007,GO:0040008,GO:0040009,GO:0040011,GO:0040012,GO:0040013,GO:0040017,GO:0040019,GO:0040034,GO:0042051,GO:0042060,GO:0042063,GO:0042067,GO:0042127,GO:0042175,GO:0042221,GO:0042246,GO:0042303,GO:0042325,GO:0042326,GO:0042327,GO:0042330,GO:0042386,GO:0042387,GO:0042461,GO:0042462,GO:0042478,GO:0042480,GO:0042490,GO:0042491,GO:0042493,GO:0042592,GO:0042633,GO:0042659,GO:0042660,GO:0042661,GO:0042663,GO:0042675,GO:0042676,GO:0042686,GO:0042688,GO:0042689,GO:0042691,GO:0042692,GO:0042693,GO:0042706,GO:0042733,GO:0042886,GO:0042981,GO:0042995,GO:0043009,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043086,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043235,GO:0043296,GO:0043408,GO:0043409,GO:0043410,GO:0043467,GO:0043470,GO:0043502,GO:0043523,GO:0043525,GO:0043535,GO:0043537,GO:0043565,GO:0043583,GO:0043588,GO:0043618,GO:0043620,GO:0043696,GO:0043697,GO:0043900,GO:0043902,GO:0043903,GO:0044057,GO:0044085,GO:0044087,GO:0044092,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0044703,GO:0044782,GO:0045069,GO:0045070,GO:0045165,GO:0045168,GO:0045177,GO:0045184,GO:0045314,GO:0045316,GO:0045445,GO:0045446,GO:0045463,GO:0045465,GO:0045466,GO:0045468,GO:0045595,GO:0045596,GO:0045597,GO:0045601,GO:0045603,GO:0045604,GO:0045605,GO:0045606,GO:0045607,GO:0045608,GO:0045610,GO:0045611,GO:0045612,GO:0045613,GO:0045614,GO:0045616,GO:0045618,GO:0045631,GO:0045632,GO:0045661,GO:0045662,GO:0045664,GO:0045665,GO:0045667,GO:0045668,GO:0045682,GO:0045683,GO:0045684,GO:0045685,GO:0045686,GO:0045687,GO:0045747,GO:0045765,GO:0045786,GO:0045787,GO:0045844,GO:0045892,GO:0045893,GO:0045920,GO:0045926,GO:0045927,GO:0045931,GO:0045934,GO:0045935,GO:0045936,GO:0045937,GO:0045944,GO:0045955,GO:0045967,GO:0045995,GO:0046328,GO:0046329,GO:0046331,GO:0046425,GO:0046427,GO:0046483,GO:0046530,GO:0046532,GO:0046533,GO:0046552,GO:0046578,GO:0046579,GO:0046620,GO:0046622,GO:0046661,GO:0046666,GO:0046667,GO:0046782,GO:0046843,GO:0046903,GO:0046982,GO:0046983,GO:0048052,GO:0048056,GO:0048103,GO:0048138,GO:0048139,GO:0048190,GO:0048232,GO:0048259,GO:0048337,GO:0048468,GO:0048469,GO:0048477,GO:0048505,GO:0048513,GO:0048514,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048524,GO:0048534,GO:0048542,GO:0048545,GO:0048546,GO:0048562,GO:0048563,GO:0048565,GO:0048568,GO:0048569,GO:0048580,GO:0048581,GO:0048583,GO:0048584,GO:0048585,GO:0048589,GO:0048592,GO:0048598,GO:0048599,GO:0048608,GO:0048609,GO:0048619,GO:0048634,GO:0048636,GO:0048638,GO:0048639,GO:0048644,GO:0048645,GO:0048646,GO:0048663,GO:0048666,GO:0048667,GO:0048699,GO:0048707,GO:0048708,GO:0048709,GO:0048710,GO:0048711,GO:0048713,GO:0048715,GO:0048729,GO:0048730,GO:0048731,GO:0048732,GO:0048736,GO:0048737,GO:0048738,GO:0048749,GO:0048754,GO:0048762,GO:0048803,GO:0048805,GO:0048806,GO:0048808,GO:0048812,GO:0048839,GO:0048844,GO:0048845,GO:0048856,GO:0048858,GO:0048859,GO:0048863,GO:0048864,GO:0048865,GO:0048867,GO:0048869,GO:0048870,GO:0048871,GO:0048872,GO:0048873,GO:0048934,GO:0048935,GO:0048936,GO:0050434,GO:0050663,GO:0050673,GO:0050678,GO:0050679,GO:0050767,GO:0050768,GO:0050769,GO:0050789,GO:0050790,GO:0050792,GO:0050793,GO:0050794,GO:0050877,GO:0050890,GO:0050896,GO:0050920,GO:0050922,GO:0051046,GO:0051048,GO:0051049,GO:0051051,GO:0051056,GO:0051057,GO:0051093,GO:0051094,GO:0051128,GO:0051129,GO:0051145,GO:0051147,GO:0051148,GO:0051153,GO:0051154,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051193,GO:0051196,GO:0051234,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051270,GO:0051271,GO:0051272,GO:0051301,GO:0051489,GO:0051674,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0051890,GO:0051960,GO:0051961,GO:0051962,GO:0055001,GO:0055006,GO:0055008,GO:0055010,GO:0055016,GO:0055017,GO:0055021,GO:0055023,GO:0055024,GO:0055025,GO:0055123,GO:0060019,GO:0060038,GO:0060039,GO:0060043,GO:0060045,GO:0060089,GO:0060113,GO:0060120,GO:0060173,GO:0060249,GO:0060250,GO:0060251,GO:0060253,GO:0060255,GO:0060271,GO:0060284,GO:0060288,GO:0060289,GO:0060317,GO:0060322,GO:0060379,GO:0060411,GO:0060412,GO:0060415,GO:0060419,GO:0060420,GO:0060421,GO:0060429,GO:0060485,GO:0060491,GO:0060512,GO:0060525,GO:0060528,GO:0060537,GO:0060538,GO:0060541,GO:0060548,GO:0060560,GO:0060561,GO:0060562,GO:0060563,GO:0060571,GO:0060581,GO:0060582,GO:0060627,GO:0060740,GO:0060742,GO:0060768,GO:0060828,GO:0060837,GO:0060840,GO:0060841,GO:0060842,GO:0060843,GO:0060947,GO:0060948,GO:0060956,GO:0060972,GO:0060973,GO:0060976,GO:0060977,GO:0060979,GO:0060982,GO:0061005,GO:0061008,GO:0061053,GO:0061061,GO:0061138,GO:0061311,GO:0061314,GO:0061326,GO:0061331,GO:0061333,GO:0061344,GO:0061351,GO:0061371,GO:0061382,GO:0061383,GO:0061384,GO:0061418,GO:0061419,GO:0061437,GO:0061440,GO:0061448,GO:0061458,GO:0061525,GO:0061564,GO:0062012,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070161,GO:0070167,GO:0070168,GO:0070302,GO:0070303,GO:0070372,GO:0070374,GO:0070482,GO:0070848,GO:0070887,GO:0070925,GO:0070986,GO:0071310,GO:0071363,GO:0071371,GO:0071372,GO:0071453,GO:0071456,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0072001,GO:0072002,GO:0072006,GO:0072007,GO:0072008,GO:0072009,GO:0072012,GO:0072017,GO:0072044,GO:0072073,GO:0072080,GO:0072089,GO:0072091,GO:0072109,GO:0072132,GO:0072143,GO:0072144,GO:0072148,GO:0072358,GO:0072359,GO:0072602,GO:0080090,GO:0080134,GO:0080135,GO:0090049,GO:0090051,GO:0090068,GO:0090090,GO:0090092,GO:0090100,GO:0090101,GO:0090130,GO:0090132,GO:0090257,GO:0090287,GO:0090288,GO:0090304,GO:0090596,GO:0090598,GO:0097084,GO:0097150,GO:0097159,GO:0097223,GO:0097435,GO:0097485,GO:0097659,GO:0097708,GO:0098588,GO:0098590,GO:0098609,GO:0098727,GO:0098742,GO:0098772,GO:0098773,GO:0098791,GO:0098796,GO:0098797,GO:0098827,GO:0099503,GO:0120025,GO:0120031,GO:0120032,GO:0120035,GO:0120036,GO:0120039,GO:0140110,GO:1900087,GO:1900371,GO:1900542,GO:1901187,GO:1901189,GO:1901201,GO:1901213,GO:1901214,GO:1901216,GO:1901342,GO:1901343,GO:1901360,GO:1901362,GO:1901363,GO:1901522,GO:1901532,GO:1901533,GO:1901576,GO:1901652,GO:1901698,GO:1901700,GO:1901861,GO:1901863,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902263,GO:1902337,GO:1902339,GO:1902531,GO:1902532,GO:1902533,GO:1902679,GO:1902680,GO:1902692,GO:1902742,GO:1902806,GO:1902808,GO:1903053,GO:1903054,GO:1903224,GO:1903305,GO:1903306,GO:1903506,GO:1903507,GO:1903508,GO:1903530,GO:1903531,GO:1903578,GO:1903670,GO:1903671,GO:1903706,GO:1903707,GO:1903847,GO:1903849,GO:1903900,GO:1903902,GO:1904018,GO:1904238,GO:1904747,GO:1904748,GO:1904892,GO:1904894,GO:1905207,GO:1905314,GO:1905456,GO:1905457,GO:1905651,GO:1905653,GO:1905770,GO:1905772,GO:1905902,GO:1905904,GO:1990837,GO:2000026,GO:2000027,GO:2000043,GO:2000045,GO:2000047,GO:2000048,GO:2000112,GO:2000113,GO:2000136,GO:2000137,GO:2000145,GO:2000146,GO:2000147,GO:2000177,GO:2000179,GO:2000181,GO:2000209,GO:2000241,GO:2000380,GO:2000382,GO:2000543,GO:2000648,GO:2000736,GO:2000737,GO:2000811,GO:2000826,GO:2000973,GO:2000974,GO:2000980,GO:2000981,GO:2001013,GO:2001026,GO:2001027,GO:2001141,GO:2001169 - 0.0000000000000000243 91.0
DYD3_k127_931031_72 PFAM 17 kDa surface antigen - - - 0.000000000000003607 81.0
DYD3_k127_931031_73 ABC transporter substrate binding protein K01989 - - 0.000000000003355 78.0
DYD3_k127_931031_74 Transcriptional regulatory protein, C terminal - - - 0.0000001939 60.0
DYD3_k127_931031_75 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.000001209 61.0
DYD3_k127_931031_8 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 2.168e-197 623.0
DYD3_k127_931031_9 PFAM fatty acid desaturase K00507 - 1.14.19.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 565.0