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Overview

ID MAG00962
Name DYD3_bin.34
Sample SMP0027
Taxonomy
Kingdom Bacteria
Phylum Methylomirabilota
Class Methylomirabilia
Order Rokubacteriales
Family CSP1-6
Genus CAMLFJ01
Species CAMLFJ01 sp035524955
Assembly information
Completeness (%) 80.2
Contamination (%) 5.94
GC content (%) 71.0
N50 (bp) 6,422
Genome size (bp) 3,601,067

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes3716

Gene name Description KEGG GOs EC E-value Score Sequence
DYD3_k127_1013650_0 Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) K01433 - 3.5.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001644 356.0
DYD3_k127_1013650_1 AMP-binding enzyme C-terminal domain K00666 - - 0.000000000000000000000000000000003381 131.0
DYD3_k127_1013650_2 COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III K00784 - 3.1.26.11 0.00008835 48.0
DYD3_k127_1052264_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001917 525.0
DYD3_k127_1052264_1 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005596 431.0
DYD3_k127_1052264_2 cation diffusion facilitator family transporter K16264 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005565 300.0
DYD3_k127_1052264_3 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000001601 213.0
DYD3_k127_1052264_4 iron dependent repressor K03709 - - 0.00000000000000000000000000000000000000000004087 183.0
DYD3_k127_1052264_5 Metallo-beta-lactamase superfamily K13075 - 3.1.1.81 0.0000000000000000000000000000000000000001931 168.0
DYD3_k127_1052264_6 Uncharacterized ACR, COG1430 K09005 - - 0.0000000005179 67.0
DYD3_k127_1052264_7 Thioredoxin - - - 0.000000005566 66.0
DYD3_k127_1058576_0 racemase activity, acting on amino acids and derivatives - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002038 257.0
DYD3_k127_1058576_1 TRAP transporter, solute receptor (TAXI family K07080 - - 0.0000000000000000000000000000000000000000005053 170.0
DYD3_k127_1068210_0 Branched-chain amino acid transport system / permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004271 357.0
DYD3_k127_1068210_1 Branched-chain amino acid transport system / permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002836 355.0
DYD3_k127_1068210_2 ATPases associated with a variety of cellular activities - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 324.0
DYD3_k127_1068210_3 ParB-like nuclease domain K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000609 274.0
DYD3_k127_1068210_4 ATPases associated with a variety of cellular activities - - - 0.000000000000000000000000000000000000000000000000000000000001398 212.0
DYD3_k127_1068210_5 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.00000000000000000000000000001643 120.0
DYD3_k127_1068210_6 ATPases associated with a variety of cellular activities K01996 - - 0.0000000000000000000559 101.0
DYD3_k127_1068210_7 short-chain dehydrogenase reductase SDR - - - 0.0004722 53.0
DYD3_k127_1074832_0 Carbon-nitrogen hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003792 396.0
DYD3_k127_1074832_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000433 307.0
DYD3_k127_1074832_10 Alkylmercury lyase - - - 0.00000002594 57.0
DYD3_k127_1074832_11 Pfam Activator of Hsp90 ATPase - - - 0.00001864 51.0
DYD3_k127_1074832_2 Protein of unknown function (DUF4256) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006795 267.0
DYD3_k127_1074832_3 Uncharacterized protein conserved in bacteria (DUF2200) - - - 0.0000000000000000000000000000000000000000000000000000000001058 206.0
DYD3_k127_1074832_4 HxlR-like helix-turn-helix - - - 0.0000000000000000000000000000000000000000000000000004388 188.0
DYD3_k127_1074832_6 - - - - 0.000000000000000000000000000002093 133.0
DYD3_k127_1074832_7 glyoxalase III activity - - - 0.000000000000000000000000000004868 126.0
DYD3_k127_1074832_8 Alkylmercury lyase - - - 0.0000000000000005863 91.0
DYD3_k127_1074832_9 O-Antigen ligase - - - 0.000000003283 70.0
DYD3_k127_1080563_0 Putative modulator of DNA gyrase K03568 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0019538,GO:0043170,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002988 608.0
DYD3_k127_1080563_1 peptidase dimerisation domain protein K01436 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008701 505.0
DYD3_k127_1080563_2 ABC transporter substrate-binding protein K02016 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008391 263.0
DYD3_k127_1080563_3 Putative modulator of DNA gyrase K03592 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0019538,GO:0043170,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564 - 0.0000000000000000000000000000000000000002466 160.0
DYD3_k127_1080563_4 AAA ATPase domain - - - 0.00000001106 59.0
DYD3_k127_1089390_0 Fumarylacetoacetate (FAA) hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001564 462.0
DYD3_k127_1089390_1 Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid K18235 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006352 445.0
DYD3_k127_1089390_2 Alcohol dehydrogenase GroES-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002252 319.0
DYD3_k127_1097091_0 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002592 417.0
DYD3_k127_1097091_1 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005643 353.0
DYD3_k127_1097091_2 Belongs to the UPF0271 (lamB) family K07160 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002915 263.0
DYD3_k127_1097091_3 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K01845 - 5.4.3.8 0.0000000000000000000000000000000000000000000000000000000001784 211.0
DYD3_k127_1097091_4 Is also involved in protein lipoylation via its role as an octanoyl lipoyl carrier protein intermediate K02437 - - 0.00000000000000000000000000000000000000000003496 170.0
DYD3_k127_1097091_5 FAD dependent oxidoreductase - - - 0.000778 46.0
DYD3_k127_1099937_0 MgsA AAA+ ATPase C terminal K07478 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003148 493.0
DYD3_k127_1099937_1 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001839 401.0
DYD3_k127_1099937_10 Tetratricopeptide repeat - - - 0.00001121 57.0
DYD3_k127_1099937_2 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 GO:0003674,GO:0003824,GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0010487,GO:0016740,GO:0016765,GO:0034641,GO:0042401,GO:0043919,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0071704,GO:1901564,GO:1901566,GO:1901576 2.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006971 352.0
DYD3_k127_1099937_3 Glycosyltransferase family 28 N-terminal domain K02563 - 2.4.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004686 306.0
DYD3_k127_1099937_4 regulatory protein, gntR - - - 0.0000000000000000000000000000000000000000000000000000000000000000006774 244.0
DYD3_k127_1099937_5 Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine K01611 - 4.1.1.50 0.000000000000000000000000000000000000000001402 162.0
DYD3_k127_1099937_6 Maf-like protein K06287 GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 - 0.00000000000000000001759 98.0
DYD3_k127_1099937_7 Haloacid dehalogenase-like hydrolase - - - 0.00000000000000002151 94.0
DYD3_k127_1099937_8 Domain in cystathionine beta-synthase and other proteins. K04767 - - 0.00000000000002222 85.0
DYD3_k127_1099937_9 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components K02051 - - 0.0000001133 63.0
DYD3_k127_1104871_0 Amidase K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001573 623.0
DYD3_k127_1104871_1 PFAM ATPase associated with various cellular activities, AAA_3 K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002706 392.0
DYD3_k127_1104871_2 amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000005759 221.0
DYD3_k127_1104871_3 Domain of unknown function (DUF4126) - - - 0.00000000000000000000000000000000000001968 147.0
DYD3_k127_1104871_4 protein some members contain a von Willebrand factor type A vWA domain - - - 0.000000000000000000000000000000000008544 157.0
DYD3_k127_1104871_5 carboxylic ester hydrolase activity - - - 0.00000000000000000008695 101.0
DYD3_k127_1104871_6 Domain of unknown function (DUF4129) - - - 0.000000006702 67.0
DYD3_k127_111204_0 Ndr family K00433 - 1.11.1.10 0.000000000000000000000000000000000000000000000000000000000000000006467 235.0
DYD3_k127_111204_1 Cupin superfamily (DUF985) K09705 - - 0.000000000000000000000000000000000000000000000000000003228 197.0
DYD3_k127_111204_2 oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000001919 199.0
DYD3_k127_111204_3 Universal stress protein - - - 0.0000000000000000008024 93.0
DYD3_k127_111204_4 Belongs to the LOG family K06966 - 3.2.2.10 0.0001157 51.0
DYD3_k127_1115249_0 Haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006803 328.0
DYD3_k127_1115249_1 Enoyl-(Acyl carrier protein) reductase K00065 - 1.1.1.127 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 320.0
DYD3_k127_1115249_2 Antibiotic biosynthesis monooxygenase K11530 - 5.3.1.32 0.000000000000002534 89.0
DYD3_k127_1115249_3 Phosphotransferase enzyme family - - - 0.000000000008091 76.0
DYD3_k127_1131463_0 PFAM dehydrogenase E1 component K21416 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004129 464.0
DYD3_k127_1131463_1 Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate K07749 - 2.8.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001657 411.0
DYD3_k127_1131463_2 Domain of unknown function(DUF2779) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001526 394.0
DYD3_k127_1131463_3 PFAM Taurine catabolism dioxygenase TauD, TfdA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003939 364.0
DYD3_k127_1131463_4 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004288 293.0
DYD3_k127_1131463_5 metal-dependent hydrolase of the TIM-barrel fold K03392,K22213 - 4.1.1.45,4.1.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000005914 286.0
DYD3_k127_1140195_0 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 2.173e-275 871.0
DYD3_k127_1140195_1 PFAM Mandelate racemase muconate lactonizing K20023 - 4.2.1.156,4.2.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000372 551.0
DYD3_k127_1140195_2 - K07395 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006135 362.0
DYD3_k127_1140195_3 Transglutaminase/protease-like homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007744 339.0
DYD3_k127_1140195_4 Amino-transferase class IV K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001027 279.0
DYD3_k127_1140195_5 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000678 199.0
DYD3_k127_1140195_6 Serine aminopeptidase, S33 K22369 - - 0.000006097 50.0
DYD3_k127_1143428_0 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 2.576e-195 639.0
DYD3_k127_1143428_1 Two component, sigma54 specific, transcriptional regulator, Fis family K07714 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002562 513.0
DYD3_k127_1143428_2 COG0733 Na -dependent transporters of the SNF family K03308 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005382 366.0
DYD3_k127_1143428_3 adenylylsulfate kinase activity K00860 - 2.7.1.25 0.000000000000000000000000000000000000000002538 169.0
DYD3_k127_1143428_4 Acyl-CoA synthetase (NDP forming) - - - 0.000000000000000000000000000005428 126.0
DYD3_k127_1143428_5 Universal stress protein - - - 0.00000000000000000000002306 105.0
DYD3_k127_1143428_6 Domain in cystathionine beta-synthase and other proteins. K04767 - - 0.00000000000000000003315 96.0
DYD3_k127_1143428_7 Belongs to the universal stress protein A family - - - 0.000000000000000003884 99.0
DYD3_k127_1143428_8 PFAM response regulator receiver K02483,K07667 - - 0.0000000000000002392 90.0
DYD3_k127_1143428_9 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.00001949 54.0
DYD3_k127_116037_0 Hydantoinase B/oxoprolinase - - - 4.764e-250 782.0
DYD3_k127_116037_1 AMP-binding enzyme C-terminal domain - - - 0.00000000000000000000000000000006176 130.0
DYD3_k127_1174562_0 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0032153,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0051301,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 421.0
DYD3_k127_1174562_1 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004357 295.0
DYD3_k127_1174562_2 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000000000000000000000000000000000000000000000000000000001639 221.0
DYD3_k127_1174562_3 Belongs to the multicopper oxidase YfiH RL5 family K05810 GO:0003674,GO:0005488,GO:0005507,GO:0043167,GO:0043169,GO:0046872,GO:0046914 - 0.0000000000000000000000000000000000000001205 160.0
DYD3_k127_1174562_4 PFAM DivIVA family protein K04074 - - 0.0000000000000000000001103 104.0
DYD3_k127_1174562_5 YGGT family K02221 - - 0.000000000000000002261 89.0
DYD3_k127_1188609_0 endonuclease activity K07451 - - 0.00000000000000000000000000000000000000000000005495 182.0
DYD3_k127_1188609_1 Fic/DOC family - - - 0.0000000000000000000001358 98.0
DYD3_k127_1199070_0 Homocysteine S-methyltransferase K00547 - 2.1.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005005 439.0
DYD3_k127_1199070_1 uridine kinase K00876 - 2.7.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000007624 246.0
DYD3_k127_1199070_2 Dioxygenase - - - 0.00000000002683 67.0
DYD3_k127_1199698_0 Protein of unknown function (DUF1207) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004684 370.0
DYD3_k127_1199698_1 Belongs to the amidase family K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001936 324.0
DYD3_k127_1199698_2 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 - 0.0000000000000000000000003438 111.0
DYD3_k127_1204040_0 Aconitase C-terminal domain K01681 - 4.2.1.3 1.139e-222 708.0
DYD3_k127_1204040_1 Citrate synthase, C-terminal domain K01647 - 2.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 394.0
DYD3_k127_1204040_2 PrpF protein K09788 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009207 362.0
DYD3_k127_1204040_3 PFAM acyl-CoA dehydrogenase domain protein K00249,K11731 - 1.3.8.7 0.0000000000000000000005913 97.0
DYD3_k127_1204040_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000007316 101.0
DYD3_k127_1204040_5 Belongs to the TPP enzyme family K01576 - 4.1.1.7 0.000000000000000001084 88.0
DYD3_k127_1211788_0 Belongs to the ABC transporter superfamily K02032,K10823 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002144 504.0
DYD3_k127_1211788_1 Belongs to the DapA family K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006588 282.0
DYD3_k127_1211788_2 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000001361 175.0
DYD3_k127_1234484_0 Belongs to the UbiD family K03182 - 4.1.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 609.0
DYD3_k127_1234484_1 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006747 337.0
DYD3_k127_1234484_2 COGs COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferase K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001548 315.0
DYD3_k127_1234484_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00122,K00335,K17992 - 1.12.1.3,1.17.1.9,1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000001313 250.0
DYD3_k127_1234484_4 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000002136 214.0
DYD3_k127_1234484_5 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.000000000000000000000000000000000000000000000006742 179.0
DYD3_k127_1234484_6 Predicted permease - - - 0.0000000000000000000000001504 113.0
DYD3_k127_123546_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K07306,K08352 - 1.8.5.3,1.8.5.5 2.174e-262 842.0
DYD3_k127_123546_1 Dehydrogenase K00038 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006629,GO:0008150,GO:0008152,GO:0008202,GO:0016020,GO:0016229,GO:0016491,GO:0016614,GO:0016616,GO:0033764,GO:0044238,GO:0044464,GO:0047044,GO:0055114,GO:0071704,GO:0071944,GO:1901360 1.1.1.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002006 304.0
DYD3_k127_123546_2 Phosphoenolpyruvate phosphomutase K03417 - 4.1.3.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003191 297.0
DYD3_k127_123546_3 Fumarylacetoacetate (FAA) hydrolase family K01617,K02554 - 4.1.1.77,4.2.1.80 0.0000000000000000000000000000001604 144.0
DYD3_k127_1250291_0 TrkA-N domain K03455 - - 5.777e-229 727.0
DYD3_k127_125045_0 Amidohydrolase family K15358 - 3.5.2.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001746 451.0
DYD3_k127_125045_1 Amino acid synthesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007172 260.0
DYD3_k127_125045_2 ATPases associated with a variety of cellular activities K01996 - - 0.000000000804 61.0
DYD3_k127_125045_3 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.0000005555 62.0
DYD3_k127_125045_4 Belongs to the beta-ketoacyl-ACP synthases family K09458 - 2.3.1.179 0.00006991 54.0
DYD3_k127_1252580_0 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007138 521.0
DYD3_k127_1252580_1 NAD dependent epimerase/dehydratase family K07535 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009576 286.0
DYD3_k127_1252580_2 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000009286 258.0
DYD3_k127_1252580_3 PFAM ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000002228 246.0
DYD3_k127_1252580_4 Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000104 236.0
DYD3_k127_1252580_5 Enoyl-CoA hydratase/isomerase K07537 - 4.2.1.100 0.00000000000000000000000000000000000000000000000000000000000997 233.0
DYD3_k127_1252580_6 Branched-chain amino acid transport system / permease component K01998 - - 0.0000000000000000000000000000000000000000000000000000001024 203.0
DYD3_k127_1252580_7 Hemerythrin HHE cation binding domain - - - 0.0000000000000000000000008694 110.0
DYD3_k127_1256355_0 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003337 482.0
DYD3_k127_1256355_1 Permease YjgP YjgQ family protein K07091,K11720 - - 0.000000000000000000000000000000000000000000000000000000000000000005116 247.0
DYD3_k127_1256355_2 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 - 2.7.1.39 0.00000000000000000000000000000000000000000000000000000008758 212.0
DYD3_k127_1262293_0 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007376 411.0
DYD3_k127_1262293_1 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.0000000000000000000000000000000000000000000000000000000000000002592 226.0
DYD3_k127_1262293_2 imidazoleglycerol-phosphate dehydratase activity K01693 GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.19 0.00000000000000000000000000000000000000000000000000000000000001431 237.0
DYD3_k127_1264539_0 Pyridoxal phosphate biosynthetic protein PdxA K00097,K22024 - 1.1.1.262,1.1.1.408,1.1.1.409 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003485 367.0
DYD3_k127_1264539_1 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004206 246.0
DYD3_k127_1264539_2 PFAM type III effector Hrp-dependent outers K22129 - 2.7.1.219,2.7.1.220 0.000004329 51.0
DYD3_k127_1266672_0 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000000000000000000000000000000000000000009278 204.0
DYD3_k127_1267053_0 Rieske (2Fe-2S) domain-containing protein K15060 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 503.0
DYD3_k127_1267053_1 Amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002232 396.0
DYD3_k127_1267053_2 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008573 257.0
DYD3_k127_126935_0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K15778 - 5.4.2.2,5.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003163 437.0
DYD3_k127_126935_1 Endoribonuclease L-PSP - - - 0.00000000000000000000000000000000000000000000000001034 183.0
DYD3_k127_126935_2 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07025 - - 0.000000000005479 70.0
DYD3_k127_1282706_0 PFAM Bacterial extracellular solute-binding proteins, family 5 Middle K02035,K13893 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003777 605.0
DYD3_k127_1282706_1 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004008 459.0
DYD3_k127_1282706_2 Phosphoglycerate kinase K00927 GO:0001871,GO:0002020,GO:0003674,GO:0003824,GO:0004618,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009893,GO:0009986,GO:0009987,GO:0010468,GO:0010604,GO:0010628,GO:0010755,GO:0010756,GO:0010954,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0017144,GO:0018130,GO:0019222,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0019899,GO:0030162,GO:0030193,GO:0030195,GO:0030246,GO:0030247,GO:0030312,GO:0031323,GO:0031325,GO:0032101,GO:0032102,GO:0032268,GO:0032270,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043532,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0045862,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048585,GO:0050789,GO:0050794,GO:0050818,GO:0050819,GO:0050878,GO:0051171,GO:0051173,GO:0051186,GO:0051188,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051917,GO:0051919,GO:0055086,GO:0060255,GO:0061041,GO:0061045,GO:0065007,GO:0065008,GO:0070613,GO:0071704,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0080134,GO:0090407,GO:1900046,GO:1900047,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1903034,GO:1903035,GO:1903317,GO:1903319,GO:2001065 2.7.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000423 412.0
DYD3_k127_1282706_3 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001954 406.0
DYD3_k127_1282706_4 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000277 286.0
DYD3_k127_1282706_5 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004228 259.0
DYD3_k127_1282706_6 PFAM Phosphoribosyltransferase - - - 0.0000000000000000000000000000000009343 147.0
DYD3_k127_1282706_7 Tetratricopeptide repeat - - - 0.000000000000000000003348 102.0
DYD3_k127_1282706_8 PFAM Preprotein translocase SecG subunit K03075 - - 0.0000000000000004526 81.0
DYD3_k127_1301731_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004476 559.0
DYD3_k127_1301731_1 ornithine cyclodeaminase activity K01750,K18258,K19244 - 1.4.1.1,1.5.1.25,4.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009633 336.0
DYD3_k127_1301731_10 TIGRFAM Glutaredoxin-like domain protein - - - 0.0000000000000000005606 88.0
DYD3_k127_1301731_11 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K01104,K03325,K03741,K03892,K18701 - 1.20.4.1,2.8.4.2,3.1.3.48 0.00000000000000000162 94.0
DYD3_k127_1301731_12 Histone methylation protein DOT1 - - - 0.0000000000000001657 84.0
DYD3_k127_1301731_13 PFAM AIG2 family protein K20757 - 4.3.1.27 0.000000000000007732 80.0
DYD3_k127_1301731_14 Thioredoxin domain - - - 0.000000000000641 69.0
DYD3_k127_1301731_15 Chromate transporter K07240 - - 0.000000005285 67.0
DYD3_k127_1301731_2 PFAM NAD-dependent epimerase dehydratase K00329,K00356 - 1.6.5.3,1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007132 299.0
DYD3_k127_1301731_3 Protein of unknown function (DUF1343) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 301.0
DYD3_k127_1301731_4 - K04096 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005657 278.0
DYD3_k127_1301731_5 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001549 271.0
DYD3_k127_1301731_6 Chromate resistance exported protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000006567 242.0
DYD3_k127_1301731_7 Chromate resistance exported protein - - - 0.00000000000000000000000000000000000000000000002207 181.0
DYD3_k127_1301731_8 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000726 164.0
DYD3_k127_1301731_9 Protein of unknown function, DUF393 - - - 0.00000000000000000000000009597 111.0
DYD3_k127_1308356_0 Methyladenine glycosylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006921 309.0
DYD3_k127_1308356_1 COG0346 Lactoylglutathione lyase and related lyases K05606 - 5.1.99.1 0.0000000000000000000000000000000000000000000000000000000000000000002648 231.0
DYD3_k127_1308356_2 Protein of unknown function (DUF1467) - - - 0.0000000000000000000000000007977 115.0
DYD3_k127_1308356_3 hydrolase of the metallo-beta-lactamase superfamily K12574 - - 0.000000000000003925 78.0
DYD3_k127_130961_0 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002732 558.0
DYD3_k127_130961_1 CoA-transferase family III K07749 - 2.8.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004962 455.0
DYD3_k127_130961_2 COG0183 Acetyl-CoA acetyltransferase K00626,K00632 - 2.3.1.16,2.3.1.9 0.000000000000000000000004918 108.0
DYD3_k127_130961_3 Amidohydrolase family - - - 0.00000000000000000003254 96.0
DYD3_k127_130961_4 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000004658 106.0
DYD3_k127_130961_5 Rubredoxin-like zinc ribbon domain (DUF35_N) - - - 0.000000009807 65.0
DYD3_k127_133687_0 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346,K14161 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002493 361.0
DYD3_k127_133687_1 Protein of unknown function (DUF455) K11529 - 2.7.1.165 0.00000000000000000000000007464 112.0
DYD3_k127_1344471_0 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000521 419.0
DYD3_k127_1344471_1 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001248 291.0
DYD3_k127_1344471_2 helix_turn_helix multiple antibiotic resistance protein K15973 - - 0.000000000000000000000000000000000000000000001183 170.0
DYD3_k127_1344471_3 - - - - 0.0006648 44.0
DYD3_k127_1345507_0 N-methylhydantoinase A acetone carboxylase, beta subunit K01473 - 3.5.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009143 371.0
DYD3_k127_1345507_1 Phosphotransferase enzyme family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 357.0
DYD3_k127_1359352_0 - - - - 0.0000000000000000000000000000000000000000000000000001119 192.0
DYD3_k127_1359352_1 Major facilitator superfamily K08217 - - 0.000000000000000000000000000000000000000006134 170.0
DYD3_k127_1359352_2 - - - - 0.000000000000000001876 95.0
DYD3_k127_1359352_3 Acyl-CoA dehydrogenase, C-terminal domain K22027 - 1.14.13.235 0.00000000005706 64.0
DYD3_k127_1371968_0 Cache domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003981 430.0
DYD3_k127_1371968_1 Phospholipase D Transphosphatidylase K06131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 380.0
DYD3_k127_1371968_10 bacterial OsmY and nodulation domain - - - 0.00000000000002997 85.0
DYD3_k127_1371968_11 Belongs to the aldehyde dehydrogenase family K00135 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009013,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016620,GO:0016903,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0045333,GO:0055114,GO:0071704,GO:0071944,GO:0072350 1.2.1.16,1.2.1.20,1.2.1.79 0.000001115 56.0
DYD3_k127_1371968_12 - - - - 0.0003928 52.0
DYD3_k127_1371968_2 phosphogluconate dehydrogenase (decarboxylating) activity K00020 - 1.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002089 353.0
DYD3_k127_1371968_3 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003945 252.0
DYD3_k127_1371968_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000158 228.0
DYD3_k127_1371968_5 - - - - 0.000000000000000000000000000000000000000000000000000000007152 209.0
DYD3_k127_1371968_6 Zn-dependent hydrolases of the beta-lactamase fold K13985 - 3.1.4.54 0.0000000000000000000000000000003429 132.0
DYD3_k127_1371968_7 decarboxylase K01607 - 4.1.1.44 0.00000000000000000000000000008736 120.0
DYD3_k127_1371968_8 Biotin carboxylase C-terminal domain K01965 - 6.4.1.3 0.000000000000000000575 89.0
DYD3_k127_1371968_9 Peptidase family M48 - - - 0.00000000000000001455 93.0
DYD3_k127_1414888_0 COG0410 ABC-type branched-chain amino acid transport systems, ATPase component K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002419 259.0
DYD3_k127_1414888_1 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000007918 225.0
DYD3_k127_1414888_2 metal-dependent hydrolase with the TIM-barrel fold - - - 0.00000000000000000000000000000000000000000000000000000005287 216.0
DYD3_k127_1414888_3 Metallo-beta-lactamase family-like protein - - - 0.000000000000000000000000000000000000000000000000009461 192.0
DYD3_k127_1414888_4 Branched-chain amino acid transport system / permease component - - - 0.00000000000000000000000000001349 119.0
DYD3_k127_1421067_0 Mediates influx of magnesium ions K03284 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001557 373.0
DYD3_k127_1421067_1 Isochorismatase family K08281 - 3.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002707 320.0
DYD3_k127_1421067_2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000008206 214.0
DYD3_k127_1421067_3 Phosphate acyltransferases - - - 0.0000000000000000000000000000000000000000000000000000002446 216.0
DYD3_k127_1421067_4 COG0451 Nucleoside-diphosphate-sugar epimerases K01710,K01784 - 4.2.1.46,5.1.3.2 0.000000000000000000000000000000000000000000000000000004224 202.0
DYD3_k127_1421067_5 Polysaccharide pyruvyl transferase K16710 - - 0.0000000000000000000000000008474 131.0
DYD3_k127_1421067_6 Lrp/AsnC ligand binding domain - - - 0.00000001044 65.0
DYD3_k127_1421412_0 Amidase K02433 - 6.3.5.6,6.3.5.7 8.835e-203 641.0
DYD3_k127_1421412_1 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007729 430.0
DYD3_k127_1421412_2 ATP-dependent protease La (LON) substrate-binding domain K01338,K07157 - 3.4.21.53 0.000000000000000000000000000000000000001614 158.0
DYD3_k127_1421412_3 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.0000000000000000001167 90.0
DYD3_k127_1421412_4 Belongs to the peptidase S1C family K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.0000000000000000001586 98.0
DYD3_k127_1421412_5 - - - - 0.00002759 57.0
DYD3_k127_142241_0 Amidohydrolase - - - 0.0000000000000000000000000000001487 136.0
DYD3_k127_1442740_0 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005717 518.0
DYD3_k127_1442740_1 Pfam:KaiC - - - 0.000000000000000000000000000000000000000000000000000000000001211 220.0
DYD3_k127_1442740_2 metal-dependent hydrolase of the TIM-barrel fold K07045 - - 0.0000000000000000000000000000000000000000000005415 187.0
DYD3_k127_1442740_3 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.00000000000000000000000000000000000000000000331 171.0
DYD3_k127_1442740_4 - - - - 0.0000000000000007425 91.0
DYD3_k127_1442740_5 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000001068 74.0
DYD3_k127_1442740_6 Staphylococcal nuclease homologue K01174 - 3.1.31.1 0.00000005661 60.0
DYD3_k127_1442740_7 S-layer homology domain - - - 0.000001084 62.0
DYD3_k127_1442740_8 FecR protein - - - 0.000008654 59.0
DYD3_k127_1442740_9 PFAM Polynucleotide adenylyltransferase region K00970,K00974 - 2.7.7.19,2.7.7.72 0.00002039 56.0
DYD3_k127_1453611_0 Hydantoinaseoxoprolinase domain protein K01469,K01473 - 3.5.2.14,3.5.2.9 8.353e-227 718.0
DYD3_k127_1453611_1 PFAM Hydantoinase B oxoprolinase K01469,K01474 - 3.5.2.14,3.5.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006825 462.0
DYD3_k127_1460459_0 AcrB/AcrD/AcrF family K03296 - - 6.652e-216 714.0
DYD3_k127_1460459_1 Coenzyme A transferase K01039 - 2.8.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 391.0
DYD3_k127_1460459_10 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K08744 - 2.7.8.41 0.0008372 50.0
DYD3_k127_1460459_2 PFAM aldo keto reductase K07079 - - 0.0000000000000000000000000000000000000000000000000000000000002448 234.0
DYD3_k127_1460459_3 decarboxylase K01607 - 4.1.1.44 0.0000000000000000000000000000000000000000000000000000001434 201.0
DYD3_k127_1460459_4 Inositol monophosphatase - - - 0.000000000000000000000000000000000000000000000000000468 193.0
DYD3_k127_1460459_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000001227 169.0
DYD3_k127_1460459_6 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000000001724 144.0
DYD3_k127_1460459_7 lactoylglutathione lyase activity - - - 0.000000000000000000000000001242 121.0
DYD3_k127_1460459_8 YHS domain K07402 - - 0.000000000004554 67.0
DYD3_k127_1460459_9 Alkylmercury lyase - - - 0.00004862 52.0
DYD3_k127_1462492_0 AMP-binding protein K01895 - 6.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008091 439.0
DYD3_k127_1462492_1 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006682 357.0
DYD3_k127_1462492_2 Alkylmercury lyase - - - 0.0000000000000000000000000000000001039 143.0
DYD3_k127_1462492_3 Endoribonuclease L-PSP - - - 0.0000000000000000000000000000000008928 141.0
DYD3_k127_1472390_0 ABC transporter transmembrane region K18890 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004035 617.0
DYD3_k127_1472390_1 Y_Y_Y domain K11527 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000003749 256.0
DYD3_k127_1472390_2 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.000000000003289 72.0
DYD3_k127_147585_0 Peptidase family M1 domain K08776 - - 2.26e-228 738.0
DYD3_k127_147585_1 NHL repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009693 392.0
DYD3_k127_147585_2 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 342.0
DYD3_k127_147585_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - GO:0003674,GO:0003824,GO:0004303,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0006066,GO:0006629,GO:0007568,GO:0008150,GO:0008152,GO:0008202,GO:0008203,GO:0009719,GO:0009725,GO:0009987,GO:0010033,GO:0014070,GO:0016125,GO:0016229,GO:0016491,GO:0016614,GO:0016616,GO:0016829,GO:0016835,GO:0016836,GO:0018812,GO:0030283,GO:0032502,GO:0033764,GO:0033993,GO:0042221,GO:0042493,GO:0042579,GO:0042802,GO:0042803,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0044594,GO:0046983,GO:0048545,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0071310,GO:0071407,GO:0071704,GO:1901360,GO:1901615,GO:1902652 - 0.0000000000000000000000000000000000000000000000000000000003329 212.0
DYD3_k127_147585_4 Thioesterase superfamily - - - 0.00000000000000000000000000000000000000000000009704 178.0
DYD3_k127_147585_5 COG2515 1-aminocyclopropane-1-carboxylate deaminase K05396 - 4.4.1.15 0.00000000000000000000000000000003722 130.0
DYD3_k127_147585_6 Major Facilitator Superfamily - - - 0.0000000000000000000000000008385 127.0
DYD3_k127_147585_7 Protein of unknown function (DUF971) K00471 - 1.14.11.1 0.00000000000000000000000007655 110.0
DYD3_k127_147585_8 Ribosomal protein S21 K02970 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904 - 0.0000001841 60.0
DYD3_k127_1479830_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K18361 - 1.17.5.1,3.1.2.25 0.0 1103.0
DYD3_k127_1479830_1 benzoyl-CoA reductase K04113 - 1.3.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004415 317.0
DYD3_k127_1479830_2 benzoyl-CoA reductase K04112 - 1.3.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000008445 279.0
DYD3_k127_1479830_3 4Fe-4S binding domain K18362 - - 0.0000000000000000000000000000553 124.0
DYD3_k127_1479830_4 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000001106 112.0
DYD3_k127_1479830_5 protein, possibly involved in aromatic compounds catabolism K02614 - - 0.000000000000000000000001992 112.0
DYD3_k127_1479830_6 Bacterial regulatory proteins, tetR family - - - 0.0000000001254 70.0
DYD3_k127_1492249_0 Dehydrogenase E1 component K00164 - 1.2.4.2 1.778e-282 899.0
DYD3_k127_1492249_1 CoA-transferase family III K07749 - 2.8.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001943 561.0
DYD3_k127_1492249_2 COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3) K00382 - 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002678 523.0
DYD3_k127_1492249_3 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004051 430.0
DYD3_k127_1492249_4 Helix-hairpin-helix class 2 (Pol1 family) motifs - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 289.0
DYD3_k127_1492249_5 RNA polymerase, sigma subunit, ECF family K03088 - - 0.000000000000000000000002748 103.0
DYD3_k127_1492249_6 PFAM Endoribonuclease L-PSP K09022 - 3.5.99.10 0.00000000000000001344 95.0
DYD3_k127_1492249_7 Transcriptional regulator - - - 0.000000000000001501 79.0
DYD3_k127_1497460_0 YjgF/chorismate_mutase-like, putative endoribonuclease - - - 0.000000000000000000000000000000000000000000000000000006149 195.0
DYD3_k127_1497460_1 Taurine catabolism dioxygenase TauD, TfdA - - - 0.00000000000000000000000000000000000000000000004983 189.0
DYD3_k127_1497460_2 NUDIX hydrolase - - - 0.000000000000000000000000000001154 139.0
DYD3_k127_1500341_0 H( )-stimulated, divalent metal cation uptake system - - - 0.000000000000000000000000000000000000000000000000000000000000006132 229.0
DYD3_k127_1500341_1 Domain of unknown function (DUF1998) K06877 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010501,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070035,GO:0071704,GO:0090304,GO:0140098,GO:1901360 - 0.00000000000000000000001899 102.0
DYD3_k127_1500341_2 VanZ like family - - - 0.00000001047 64.0
DYD3_k127_1527443_0 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K03438,K13292 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0008961,GO:0009058,GO:0009059,GO:0009249,GO:0009898,GO:0009987,GO:0010467,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0031224,GO:0031226,GO:0034645,GO:0036211,GO:0042157,GO:0042158,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0051604,GO:0071704,GO:0071944,GO:0098552,GO:0098562,GO:0140096,GO:1901564,GO:1901566,GO:1901576 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001531 322.0
DYD3_k127_1527443_1 Threonine synthase K01733 - 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000007118 246.0
DYD3_k127_1527443_2 PFAM MotA TolQ ExbB proton channel K03562 - - 0.00000000000000000000000000000000000000000000000004813 188.0
DYD3_k127_1527443_3 Biopolymer transport protein ExbD/TolR K03560 - - 0.0000000000000000000000000000000005955 136.0
DYD3_k127_1527443_4 DNA methylase K00571,K00590 - 2.1.1.113,2.1.1.72 0.000000002314 67.0
DYD3_k127_1527443_5 Glycosyl transferases group 1 - - - 0.0005274 48.0
DYD3_k127_1538359_0 tRNA rRNA methyltransferase SpoU - - - 0.00000000000000000000000000000000000000004761 166.0
DYD3_k127_1538359_1 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000000000000000000003981 130.0
DYD3_k127_1538359_2 PFAM translation initiation factor SUI1 K03113 - - 0.000000000003005 66.0
DYD3_k127_154360_0 Binding-protein-dependent transport system inner membrane component K02033,K15585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 418.0
DYD3_k127_154360_1 Binding-protein-dependent transport system inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001751 383.0
DYD3_k127_154360_2 Ferredoxin - - - 0.00000000000000000000000000000000000006601 143.0
DYD3_k127_154360_3 Belongs to the 'phage' integrase family K14059 - - 0.00000000000004767 79.0
DYD3_k127_154360_4 COGs COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K13599 - - 0.0000005482 58.0
DYD3_k127_1549605_0 Amino acid permease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001827 351.0
DYD3_k127_1549605_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.0008077 46.0
DYD3_k127_1554058_0 aspartate-semialdehyde dehydrogenase K00133 - 1.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 409.0
DYD3_k127_1554058_1 Oxidoreductase FAD-binding domain K15765 - 1.18.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004079 369.0
DYD3_k127_1554058_10 Luciferase-like monooxygenase - - - 0.00000000000000000000000000022 118.0
DYD3_k127_1554058_11 Protein of unknown function (DUF983) - - - 0.000000000000000000000000009869 113.0
DYD3_k127_1554058_12 Ferredoxin - - - 0.0000000000000000001622 98.0
DYD3_k127_1554058_13 Rieske [2Fe-2S] domain K15762 - - 0.0000000000000001706 89.0
DYD3_k127_1554058_2 NHL repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005232 355.0
DYD3_k127_1554058_3 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002456 319.0
DYD3_k127_1554058_4 Bacterial transcription activator, effector binding domain K13652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002978 290.0
DYD3_k127_1554058_5 PFAM amidohydrolase 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000156 273.0
DYD3_k127_1554058_6 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K00020 - 1.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000003238 254.0
DYD3_k127_1554058_7 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000002179 170.0
DYD3_k127_1554058_8 pyridoxamine 5'-phosphate oxidase - - - 0.000000000000000000000000000000216 131.0
DYD3_k127_1554058_9 SnoaL-like polyketide cyclase - - - 0.000000000000000000000000000008777 125.0
DYD3_k127_1554281_0 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009032 377.0
DYD3_k127_1554281_1 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006815 356.0
DYD3_k127_1554281_2 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000001937 251.0
DYD3_k127_1554281_3 Periplasmic copper-binding protein (NosD) - - - 0.0001871 52.0
DYD3_k127_1554281_4 - - - - 0.0004973 50.0
DYD3_k127_1566532_0 PFAM L-carnitine dehydratase bile acid-inducible protein F K07749,K18313 - 2.8.3.16,2.8.3.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004519 289.0
DYD3_k127_1566532_1 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001445 275.0
DYD3_k127_1566532_2 Selenoprotein B, glycine betaine sarcosine D-proline reductase family K10672 - 1.21.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000004922 261.0
DYD3_k127_1566825_0 Branched-chain amino acid transport system / permease component K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 332.0
DYD3_k127_1566825_1 ABC transporter K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001923 291.0
DYD3_k127_1566825_2 P-loop containing region of AAA domain K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002124 284.0
DYD3_k127_1566825_3 Belongs to the binding-protein-dependent transport system permease family - - - 0.00000000000000001606 87.0
DYD3_k127_1566825_4 Alpha beta - - - 0.000000001411 58.0
DYD3_k127_1575538_0 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000004887 116.0
DYD3_k127_1575538_1 3-demethylubiquinone-9 3-O-methyltransferase activity K15257,K16868,K18827,K20444 - 2.1.1.265,2.1.1.294,2.7.1.181 0.0000001164 63.0
DYD3_k127_1575538_2 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07788 - - 0.000023 51.0
DYD3_k127_1582018_0 adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000217 513.0
DYD3_k127_1582018_1 Pyridoxamine 5'-phosphate oxidase K07226 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002428 257.0
DYD3_k127_1582018_2 Carbon-nitrogen hydrolase K01459 - 3.5.1.77 0.00000000000000000000000000000000001301 141.0
DYD3_k127_1582018_3 Thioesterase superfamily - - - 0.0000003972 54.0
DYD3_k127_1596451_0 Hypothetical methyltransferase K07755 - 2.1.1.137 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006206 385.0
DYD3_k127_1596451_1 Acetyltransferase (GNAT) domain K03823 - 2.3.1.183 0.000000000000000000000000000000000000000000000002842 177.0
DYD3_k127_1596451_2 Low molecular weight phosphatase family K03741 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0008794,GO:0016491,GO:0030611,GO:0030613,GO:0030614,GO:0042221,GO:0046685,GO:0050896,GO:0055114 1.20.4.1 0.000000000000000000000000000000000000000004212 156.0
DYD3_k127_1596451_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K01759 GO:0008150,GO:0010035,GO:0010038,GO:0042221,GO:0046686,GO:0050896 4.4.1.5 0.000000000000000000000004701 113.0
DYD3_k127_1596451_4 FAD dependent oxidoreductase - - - 0.00000000000000000004506 97.0
DYD3_k127_1596451_5 ArsR family transcriptional regulator - - - 0.000000000006571 74.0
DYD3_k127_1622758_0 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 GO:0000166,GO:0003674,GO:0003824,GO:0003951,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006741,GO:0006753,GO:0006766,GO:0006767,GO:0006769,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008976,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009820,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016776,GO:0017076,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005645 309.0
DYD3_k127_1622758_1 PFAM Peptidase M16 inactive domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000173 270.0
DYD3_k127_1622758_2 ribosomal RNA methyltransferase RrmJ FtsJ K06442 - 2.1.1.226,2.1.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000008322 255.0
DYD3_k127_1622758_3 (Rhomboid) family K07059 - - 0.00000000000000000000000000000000000000000000000000000000000000000000008595 246.0
DYD3_k127_1622758_4 Insulinase (Peptidase family M16) K07263 - - 0.00000000000000000000000000000000000000000000000000000000000002778 232.0
DYD3_k127_1622758_5 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000001755 145.0
DYD3_k127_1630154_0 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002711 530.0
DYD3_k127_1630154_1 PFAM Type II secretion system protein E K02454,K02652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002038 388.0
DYD3_k127_1630154_10 Type II secretion system (T2SS), protein G K02456 - - 0.0000001256 64.0
DYD3_k127_1630154_11 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.000005039 57.0
DYD3_k127_1630154_2 FMN-dependent dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000003862 253.0
DYD3_k127_1630154_3 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000009297 235.0
DYD3_k127_1630154_4 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000002312 218.0
DYD3_k127_1630154_5 NIPSNAP - - - 0.000000000000000000000000000000002706 133.0
DYD3_k127_1630154_6 cheY-homologous receiver domain - - - 0.000000000000000000000151 108.0
DYD3_k127_1630154_7 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.000000000000000003319 98.0
DYD3_k127_1630154_8 phosphorelay signal transduction system - - - 0.00000000000000001592 97.0
DYD3_k127_1630154_9 - - - - 0.0000000434 62.0
DYD3_k127_1642964_0 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001355 574.0
DYD3_k127_1642964_1 protein kinase activity K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000001145 259.0
DYD3_k127_1642964_2 His Kinase A (phosphoacceptor) domain - - - 0.0003408 51.0
DYD3_k127_1652103_0 Hsp70 protein K04043,K04044 - - 3.745e-204 652.0
DYD3_k127_1652103_1 2Fe-2S iron-sulfur cluster binding domain K04755 - - 0.0001746 44.0
DYD3_k127_1656557_0 Haloacid dehalogenase-like hydrolase K01560 - 3.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002478 328.0
DYD3_k127_1656557_1 Belongs to the LDH2 MDH2 oxidoreductase family - - - 0.000000000000000000000000000000000000000000000000000000003624 210.0
DYD3_k127_1656557_2 PFAM Bacterial regulatory proteins, tetR family K16137 - - 0.000000000000000000000000000000000000000000003062 171.0
DYD3_k127_1656557_3 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000000000000001263 153.0
DYD3_k127_1656557_4 Catalytic LigB subunit of aromatic ring-opening dioxygenase K15065 - - 0.000000000000000000000000000008712 131.0
DYD3_k127_1656557_5 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000001183 79.0
DYD3_k127_1656557_6 OsmC-like protein - - - 0.0000006807 54.0
DYD3_k127_1656557_7 peptidase activity, acting on L-amino acid peptides - GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009892,GO:0009894,GO:0009895,GO:0009987,GO:0010565,GO:0016278,GO:0016279,GO:0016740,GO:0016741,GO:0018022,GO:0018023,GO:0018193,GO:0018205,GO:0019216,GO:0019217,GO:0019222,GO:0019538,GO:0031323,GO:0031324,GO:0031329,GO:0031330,GO:0031974,GO:0031998,GO:0031999,GO:0032259,GO:0036211,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043414,GO:0043467,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045833,GO:0045922,GO:0046320,GO:0046322,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0050994,GO:0050995,GO:0051341,GO:0051354,GO:0062012,GO:0062014,GO:0065007,GO:0065009,GO:0070013,GO:0071704,GO:0080090,GO:0140096,GO:1901564,GO:1904732,GO:1904733,GO:1904735,GO:1904736 - 0.0000008961 56.0
DYD3_k127_1673578_0 Carboxyl transferase domain - - - 1.088e-212 673.0
DYD3_k127_1673578_1 AMP-binding enzyme C-terminal domain K04116 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 519.0
DYD3_k127_1673578_2 Biotin carboxylase C-terminal domain K01961 - 6.3.4.14,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002252 479.0
DYD3_k127_1673578_3 Acyl-CoA dehydrogenase, N-terminal domain K04117 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002686 432.0
DYD3_k127_1673578_4 KR domain K00059 GO:0000166,GO:0003674,GO:0003824,GO:0004312,GO:0004316,GO:0005488,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0030497,GO:0032787,GO:0036094,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0072330,GO:0097159,GO:1901265,GO:1901363,GO:1901576 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007628 350.0
DYD3_k127_1673578_5 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006907 247.0
DYD3_k127_1673578_6 Enoyl-(Acyl carrier protein) reductase K00065 - 1.1.1.127 0.0000000000000000000000000000000000000000000000000000000000184 215.0
DYD3_k127_1673578_7 Enoyl-CoA hydratase - - - 0.000000000000000000000000000000000000000000000000000367 201.0
DYD3_k127_1673578_8 DinB superfamily K07552 - - 0.000000000000000000000000000007421 126.0
DYD3_k127_1673578_9 Biotin-lipoyl like - - - 0.0000000000000000003194 89.0
DYD3_k127_1683107_0 Sugar (and other) transporter K03446 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 400.0
DYD3_k127_1683107_1 Metal-dependent hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 337.0
DYD3_k127_1683107_2 ABC transporter transmembrane region K06147 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008675 328.0
DYD3_k127_1683107_3 Biotin-lipoyl like K03543 - - 0.0000000000000000000000000000000000000000000000000000000000000000722 237.0
DYD3_k127_1683107_4 polysaccharide catabolic process K03478 - 3.5.1.105 0.000000000000000000000000000000000004843 145.0
DYD3_k127_1683107_5 antibiotic biosynthesis - - - 0.000000000000000000000000003196 118.0
DYD3_k127_1683107_6 trans-aconitate 2-methyltransferase activity K02169 - 2.1.1.197 0.00000000000003324 86.0
DYD3_k127_1715413_0 MlrC C-terminus - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 418.0
DYD3_k127_1715413_1 ABC transporter permease K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001593 303.0
DYD3_k127_1715413_2 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006324 295.0
DYD3_k127_1715413_3 Cupin domain - - - 0.00000000000000000000000000000000007206 137.0
DYD3_k127_1715413_4 Protein of unknown function (DUF1054) - - - 0.0000000000000000000000000000000002196 152.0
DYD3_k127_1724737_0 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006416 496.0
DYD3_k127_1724737_1 - - - - 0.0000000000000000000000000000000000000002157 153.0
DYD3_k127_1724737_2 Mannose-6-phosphate isomerase K01809 - 5.3.1.8 0.0000000000000000000000000000000001077 146.0
DYD3_k127_1724737_3 Radical SAM - - - 0.000000000004329 67.0
DYD3_k127_1726817_0 FAD linked oxidases, C-terminal domain K00102,K00104 GO:0003674,GO:0003824,GO:0006066,GO:0006082,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009441,GO:0009987,GO:0016054,GO:0016491,GO:0016614,GO:0017144,GO:0019154,GO:0019752,GO:0032787,GO:0033554,GO:0034308,GO:0034310,GO:0042737,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046164,GO:0046296,GO:0046395,GO:0050896,GO:0051716,GO:0055114,GO:0071704,GO:0072329,GO:1901575,GO:1901615,GO:1901616 1.1.2.4,1.1.3.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002906 543.0
DYD3_k127_1726817_1 Cysteine-rich domain K11473 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002538 433.0
DYD3_k127_1726817_2 COG1013 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001287 275.0
DYD3_k127_1726817_3 FAD binding domain K11472 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004116 266.0
DYD3_k127_1726817_4 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000004728 108.0
DYD3_k127_1729519_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001943 311.0
DYD3_k127_1729519_1 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001409 260.0
DYD3_k127_1729519_2 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.00000000000000000000000000000000000000000004447 170.0
DYD3_k127_1729519_3 PFAM Phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.000000000000000000000000000002795 131.0
DYD3_k127_1747980_0 Molybdopterin oxidoreductase Fe4S4 domain - - - 3.868e-261 822.0
DYD3_k127_1747980_1 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 345.0
DYD3_k127_1747980_2 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004578 341.0
DYD3_k127_1747980_3 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004822 297.0
DYD3_k127_1747980_4 Chromate transporter K07240 - - 0.00000000000000000000000000003276 130.0
DYD3_k127_1747980_5 Cell wall formation K00075 - 1.3.1.98 0.00000000000000000000000000005473 120.0
DYD3_k127_1747980_6 Chromate transporter K07240 - - 0.0000000000000000003768 97.0
DYD3_k127_1747980_7 - - - - 0.000001848 57.0
DYD3_k127_175666_0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000002173 171.0
DYD3_k127_175666_1 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000007733 157.0
DYD3_k127_1772613_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001059 282.0
DYD3_k127_1772613_1 Outer membrane efflux protein - - - 0.00000000000003199 83.0
DYD3_k127_1772613_2 AcrB/AcrD/AcrF family - - - 0.0002654 48.0
DYD3_k127_1785422_0 Hydantoinase/oxoprolinase - - - 8.625e-276 865.0
DYD3_k127_1785422_1 Belongs to the IlvD Edd family K01687 GO:0003674,GO:0003824,GO:0004160,GO:0016829,GO:0016835,GO:0016836 4.2.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004091 481.0
DYD3_k127_1785422_2 Belongs to the IlvD Edd family K01687 GO:0003674,GO:0003824,GO:0004160,GO:0016829,GO:0016835,GO:0016836 4.2.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004291 308.0
DYD3_k127_1785422_3 PFAM Polysaccharide deacetylase - - - 0.0000598 46.0
DYD3_k127_1798699_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 4.274e-248 780.0
DYD3_k127_1798699_1 Enoyl-(Acyl carrier protein) reductase K00208 - 1.3.1.10,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004356 389.0
DYD3_k127_1798699_2 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004098 317.0
DYD3_k127_1798699_3 Cytochrome c oxidase subunit III K02276,K02299 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000001711 215.0
DYD3_k127_1798699_4 Protein of unknown function (DUF423) - - - 0.000000000000000000000000000000000002117 153.0
DYD3_k127_1798699_5 aminopeptidase K01262 - 3.4.11.9 0.00000000000000000000005661 99.0
DYD3_k127_1798699_6 Prokaryotic Cytochrome C oxidase subunit IV K02277 - 1.9.3.1 0.000000000000001391 81.0
DYD3_k127_1801365_0 COG3119 Arylsulfatase A and related enzymes - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001968 413.0
DYD3_k127_1801365_1 Ethylbenzene dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000093 408.0
DYD3_k127_1801365_2 Uncharacterised ArCR, COG2043 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003094 376.0
DYD3_k127_1801365_3 HMGL-like K01640 - 4.1.3.4 0.00000000000000000000000000000000000000000000000000000000000000000055 233.0
DYD3_k127_1801365_4 O-methyltransferase - - - 0.0000000000000000000000001559 113.0
DYD3_k127_1801365_5 - - - - 0.000001854 58.0
DYD3_k127_1811638_0 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006906 605.0
DYD3_k127_1811638_1 Belongs to the GPI family K01810,K13810 - 2.2.1.2,5.3.1.9 0.000000000000000000000000000000000000000000000000000000000000008365 224.0
DYD3_k127_1811638_2 - - - - 0.00000000004777 63.0
DYD3_k127_1811638_3 - - - - 0.000003874 59.0
DYD3_k127_1811638_4 DUF218 domain - - - 0.00003653 54.0
DYD3_k127_1825643_0 TrkA-N domain K03455,K10716 - - 1.382e-200 651.0
DYD3_k127_1825643_1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 - 5.4.2.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007843 478.0
DYD3_k127_1825643_2 PFAM phosphoesterase, RecJ domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006921 331.0
DYD3_k127_1825643_3 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 321.0
DYD3_k127_1825643_4 PFAM Peptidase M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002414 269.0
DYD3_k127_1825643_5 Fumarylacetoacetate (FAA) hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004941 256.0
DYD3_k127_1825643_6 Rhomboid family K19225 - 3.4.21.105 0.0000000000000000000000000000000000000000000000000242 196.0
DYD3_k127_1825643_7 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000003119 71.0
DYD3_k127_1829686_0 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 337.0
DYD3_k127_1829686_1 RadC-like JAB domain K03630 - - 0.000000000000000000000000000000000000000000000000000000000001303 227.0
DYD3_k127_1829686_2 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor - - - 0.000000000000000000000000000000003239 144.0
DYD3_k127_1829686_3 PFAM Uncharacterised protein family UPF0079, ATPase K06925 - - 0.000000000000000000000000000003337 138.0
DYD3_k127_1829686_4 abc-type fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.00000000000000000000000001561 112.0
DYD3_k127_1830046_0 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001927 251.0
DYD3_k127_1830046_1 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.00000000000000000000000000000000000000000000000000000000000000000008763 235.0
DYD3_k127_1830046_2 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.00000000000000000000000000000000001972 138.0
DYD3_k127_1830046_3 Binds to the 23S rRNA K02876 - - 0.00000000000000000000000000000000007616 141.0
DYD3_k127_1830046_4 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.0000000000000000003187 87.0
DYD3_k127_1830046_5 Ribosomal protein L30p/L7e K02907 - - 0.00000000000005867 73.0
DYD3_k127_1839753_0 Adenylate and Guanylate cyclase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008539 574.0
DYD3_k127_1839753_1 Inositol monophosphatase family - - - 0.00000000000000000000000000000000000000000000000000000000000002926 221.0
DYD3_k127_1855183_0 GTP cyclohydrolase I K00950,K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006082,GO:0006139,GO:0006575,GO:0006725,GO:0006729,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008616,GO:0009058,GO:0009108,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0019752,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034404,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0040007,GO:0042455,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046116,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617,GO:1901657,GO:1901659 2.7.6.3,3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000001321 255.0
DYD3_k127_1855183_1 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000001284 136.0
DYD3_k127_1855183_2 PFAM 6-pyruvoyl tetrahydropterin K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000004195 129.0
DYD3_k127_1855183_3 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.000000000004437 76.0
DYD3_k127_1855183_4 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.000000004202 59.0
DYD3_k127_1859996_0 belongs to the UPF0276 family K09930 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005938 349.0
DYD3_k127_1859996_1 Major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002392 349.0
DYD3_k127_1859996_10 SMP-30/Gluconolaconase/LRE-like region K01053 - 3.1.1.17 0.0002688 47.0
DYD3_k127_1859996_2 Cupin 2, conserved barrel domain protein K11477 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006763 305.0
DYD3_k127_1859996_3 lipopolysaccharide transport K22110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004394 292.0
DYD3_k127_1859996_4 Uncharacterized protein conserved in bacteria (DUF2064) K09931 - - 0.000000000000000000000000000000000000000000000000000000345 202.0
DYD3_k127_1859996_5 Putative DNA-binding domain - - - 0.0000000000000000000000000000000000000000007399 168.0
DYD3_k127_1859996_6 DoxX K15977 - - 0.0000000000000000000000000000000000001204 146.0
DYD3_k127_1859996_7 Predicted integral membrane protein (DUF2282) - - - 0.00000000000000000000003683 103.0
DYD3_k127_1859996_8 SnoaL-like polyketide cyclase - - - 0.00000000000000000000133 100.0
DYD3_k127_1859996_9 OsmC-like protein - - - 0.0000002343 56.0
DYD3_k127_1865148_0 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000593 356.0
DYD3_k127_1865148_1 MafB19-like deaminase - - - 0.00000000000000000000000000000000000000000000000000000000000000000001541 239.0
DYD3_k127_1865148_10 PFAM Carboxymuconolactone decarboxylase - - - 0.00001259 51.0
DYD3_k127_1865148_11 - K17226,K17227 - - 0.00009597 53.0
DYD3_k127_1865148_12 sulfur oxidation protein (SoxY) K17226 - - 0.0007214 50.0
DYD3_k127_1865148_13 Domains LysM, LysM, NLPC_P60 K19223 - - 0.0007985 50.0
DYD3_k127_1865148_14 nuclear chromosome segregation - - - 0.0009976 49.0
DYD3_k127_1865148_2 Thioredoxin-like K02199,K03671 - - 0.0000000000000000000000000000000000000000000001447 187.0
DYD3_k127_1865148_3 Transmembrane exosortase (Exosortase_EpsH) - - - 0.0000000000000000000000000000000000000001899 162.0
DYD3_k127_1865148_4 Thioredoxin-like - - - 0.00000000000000000000000000000000000001432 152.0
DYD3_k127_1865148_5 - - - - 0.000000000000000000000000000000000000562 150.0
DYD3_k127_1865148_6 Cytochrome C biogenesis protein transmembrane region - - - 0.00000000000000000000004695 102.0
DYD3_k127_1865148_7 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000017 84.0
DYD3_k127_1865148_8 Phospholipid methyltransferase - - - 0.0000000000000001741 89.0
DYD3_k127_1869893_0 Glucose inhibited division protein A K21401 - 1.3.99.38 0.00000000000000000000000000000000000000000000000000000000000000000002918 257.0
DYD3_k127_1869893_1 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000008679 181.0
DYD3_k127_1869893_2 PFAM Methyltransferase type 11 - - - 0.00000000000000000000000000000000000000005524 160.0
DYD3_k127_1869893_3 Protein of unknown function (DUF3240) - - - 0.000000000000000000001119 97.0
DYD3_k127_1871624_0 Epoxide hydrolase N terminus K01253 - 3.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005512 547.0
DYD3_k127_1871624_1 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003893 303.0
DYD3_k127_1871624_2 Calcineurin-like phosphoesterase superfamily domain K07098 - - 0.0000000000000000000000000000000000000000000000000000005629 198.0
DYD3_k127_1871624_3 Methylmalonyl-CoA mutase K01847,K01848,K14447 GO:0003674,GO:0003824,GO:0004494,GO:0005488,GO:0008144,GO:0016853,GO:0016866,GO:0019842,GO:0031419,GO:0036094,GO:0046906,GO:0048037,GO:0097159,GO:1901363 5.4.99.2,5.4.99.63 0.000000000000000000000000001374 115.0
DYD3_k127_1871624_4 Calcineurin-like phosphoesterase K07098 - - 0.0000000002913 73.0
DYD3_k127_1874577_0 Rieske [2Fe-2S] domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004952 437.0
DYD3_k127_1874577_1 PFAM Methionine synthase, vitamin-B12 independent K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003959 313.0
DYD3_k127_1874577_2 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001166 276.0
DYD3_k127_1874577_3 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000003591 260.0
DYD3_k127_1874577_4 COGs COG4299 conserved - - - 0.0000000000000000000000000000000000000000000000000135 197.0
DYD3_k127_1874577_5 Enoyl-CoA hydratase K16425 GO:0003674,GO:0003824,GO:0004300,GO:0016829,GO:0016835,GO:0016836 - 0.000000000000000000000000000000000000000000000115 177.0
DYD3_k127_1886017_0 Belongs to the heme-copper respiratory oxidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007008 257.0
DYD3_k127_1886017_1 Domain of unknown function (DUF1858) - - - 0.0000000000000000000000000000000000000000002176 173.0
DYD3_k127_1886017_2 PFAM Cyclic nucleotide-binding K10914,K21564 - - 0.000000000000000000000000000000000331 141.0
DYD3_k127_1886017_3 Cytochrome C and Quinol oxidase polypeptide I - - - 0.00000000000000000000000000000000141 134.0
DYD3_k127_1886017_4 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 GO:0003674,GO:0003824,GO:0004733,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0016491,GO:0016638,GO:0016641,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046184,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 1.4.3.5 0.0000000000000000000000000000003597 133.0
DYD3_k127_1886017_5 Hemerythrin HHE cation binding domain - - - 0.0008963 51.0
DYD3_k127_1909114_0 abc-type fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.00000000000000000000000000000000000000000000000000000001058 206.0
DYD3_k127_1909114_1 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.00000000000000000000000000000000000000000000000005306 196.0
DYD3_k127_1917515_0 Thiamine pyrophosphate enzyme, C-terminal TPP binding K00179 - 1.2.7.8 9.493e-260 818.0
DYD3_k127_1917515_1 PFAM multi antimicrobial extrusion protein MatE - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 481.0
DYD3_k127_1917515_10 HxlR-like helix-turn-helix - - - 0.00000000000000000000000000000002322 139.0
DYD3_k127_1917515_11 Conserved hypothetical protein 95 K08316 - 2.1.1.171 0.0000000000000000000000000000004559 134.0
DYD3_k127_1917515_2 Aminotransferase K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 421.0
DYD3_k127_1917515_3 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003526 378.0
DYD3_k127_1917515_4 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 GO:0003674,GO:0003824,GO:0004595,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 0.0000000000000000000000000000000000000000000000000000222 192.0
DYD3_k127_1917515_5 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000008021 169.0
DYD3_k127_1917515_6 Thioesterase-like superfamily K02614 - - 0.00000000000000000000000000000000000000008837 164.0
DYD3_k127_1917515_7 - - - - 0.00000000000000000000000000000000000001661 152.0
DYD3_k127_1917515_8 carbon monoxide dehydrogenase subunit G K09386 - - 0.000000000000000000000000000000000001374 147.0
DYD3_k127_1917515_9 Pyruvate ferredoxin/flavodoxin oxidoreductase - - - 0.00000000000000000000000000000000002393 157.0
DYD3_k127_1919242_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K01845 - 5.4.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003177 472.0
DYD3_k127_1919242_1 - - - - 0.0000000000000000000000000000000000000000009384 169.0
DYD3_k127_1919242_2 iron dependent repressor - - - 0.0000000000000000000000000000000004622 149.0
DYD3_k127_1919242_3 DinB family - - - 0.000000002025 65.0
DYD3_k127_1934416_0 PFAM Glycosyl transferase family 2 K00721 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000000000000002899 254.0
DYD3_k127_1934416_1 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 2.5.1.129 0.0000000000000000000000000000000000000000000000000000000000000002321 231.0
DYD3_k127_1934416_2 oxidoreductase - - - 0.0000000000000000000000000000000000000102 158.0
DYD3_k127_1934416_3 Protein of unknown function (DUF507) K09804 - - 0.00000002558 61.0
DYD3_k127_1936849_0 Beta-eliminating lyase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009328 404.0
DYD3_k127_1936849_1 NAD dependent epimerase/dehydratase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004379 332.0
DYD3_k127_1936849_2 Belongs to the DegT DnrJ EryC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006716 338.0
DYD3_k127_1936849_3 Dehydrogenase E1 component K00161,K21416 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001521 279.0
DYD3_k127_1944584_0 Long-chain fatty acid--CoA ligase K01897 - 6.2.1.3 2.814e-255 801.0
DYD3_k127_1944584_1 COG0411 ABC-type branched-chain amino acid transport systems, ATPase component K01995 - - 0.00000000000000000000000000000000000000000000000001654 205.0
DYD3_k127_1947052_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 4.871e-294 928.0
DYD3_k127_1947052_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009812 586.0
DYD3_k127_1947052_2 phosphorelay signal transduction system K07315 - 3.1.3.3 0.00000000000000000002284 108.0
DYD3_k127_1947052_3 Regulatory protein RecX K03565 - - 0.000003302 57.0
DYD3_k127_1954667_0 Two component, sigma54 specific, transcriptional regulator, Fis family K07712,K07714 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0043565,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008439 459.0
DYD3_k127_1954667_1 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005597 357.0
DYD3_k127_1954667_2 PFAM ATP-binding region, ATPase domain protein K02668,K07708,K07709 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000003816 284.0
DYD3_k127_1954667_3 Ketopantoate reductase PanE/ApbA C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001281 274.0
DYD3_k127_1954667_4 Pfam Methyladenine glycosylase K01246 - 3.2.2.20 0.0000000000000000000000000000000000000000000000000000000000000000000000006649 250.0
DYD3_k127_1954667_5 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000002079 243.0
DYD3_k127_1954667_6 Protein conserved in bacteria K09798 - - 0.000000000000000000000000000000000001345 149.0
DYD3_k127_1969626_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002376 547.0
DYD3_k127_1969626_1 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004889 398.0
DYD3_k127_1969626_10 Helix-turn-helix domain K15539 - - 0.0000000002855 64.0
DYD3_k127_1969626_11 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.000000004095 65.0
DYD3_k127_1969626_2 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007076 385.0
DYD3_k127_1969626_3 Riboflavin biosynthesis protein RibD K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007304 334.0
DYD3_k127_1969626_4 Carbon-nitrogen hydrolase K03820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000258 324.0
DYD3_k127_1969626_5 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007656 306.0
DYD3_k127_1969626_6 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000001857 211.0
DYD3_k127_1969626_7 Lumazine binding domain K00793 GO:0003674,GO:0003824,GO:0004746,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.9 0.00000000000000000000000000000000000000000000000004281 186.0
DYD3_k127_1969626_8 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.00000000000000000000000000000000000000000002045 166.0
DYD3_k127_1969626_9 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.000000000000000000000000000009449 134.0
DYD3_k127_1974839_0 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005162 297.0
DYD3_k127_1974839_1 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000001933 221.0
DYD3_k127_1974839_2 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.0000000000000000000000000000000000000000000000000002382 186.0
DYD3_k127_1974839_3 Membrane proteins related to metalloendopeptidases - - - 0.00000000000000005692 88.0
DYD3_k127_1974839_4 Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.00004956 48.0
DYD3_k127_199184_0 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003819 293.0
DYD3_k127_199184_1 Involved in DNA repair and RecF pathway recombination K03474,K03584 GO:0008150,GO:0009314,GO:0009628,GO:0050896 2.6.99.2 0.0000000000000000000000000000000002967 139.0
DYD3_k127_199184_2 Phosphate starvation-inducible protein PhoH K06217 - - 0.000000000000000000000001227 104.0
DYD3_k127_199184_3 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.000000000000000000000005273 110.0
DYD3_k127_199410_0 III protein, CoA-transferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003754 527.0
DYD3_k127_199410_1 TIGRFAM drug resistance transporter, EmrB QacA subfamily K03446 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004556 477.0
DYD3_k127_199410_2 Thiamine pyrophosphate enzyme, central domain K01576 - 4.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007799 296.0
DYD3_k127_199410_3 Biotin-lipoyl like K03543 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005964 266.0
DYD3_k127_2030386_0 Belongs to the malate synthase family K01638 - 2.3.3.9 0.0000000000000000000000000000000000000000000000000000000000000001239 240.0
DYD3_k127_2030386_1 domain protein - - - 0.000009638 51.0
DYD3_k127_2039981_0 PFAM Glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.00000000000000000000000000000000000000000000000000000001392 206.0
DYD3_k127_2039981_1 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.000000000000000000000000000000000000000001696 163.0
DYD3_k127_2039981_2 PFAM Phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.000000000000000000000000000000000001588 147.0
DYD3_k127_2039981_3 ECF sigma factor - - - 0.0000000000000000000000000005564 120.0
DYD3_k127_2093207_0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain K01955 - 6.3.5.5 0.0 1349.0
DYD3_k127_2093207_1 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004025 407.0
DYD3_k127_2093207_10 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000001014 179.0
DYD3_k127_2093207_11 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0008270,GO:0008463,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043021,GO:0043022,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0046872,GO:0046914,GO:0071704,GO:1901564 3.5.1.88 0.0000000000000000000000000000000000000002987 155.0
DYD3_k127_2093207_12 - - - - 0.000001784 58.0
DYD3_k127_2093207_13 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.000009081 50.0
DYD3_k127_2093207_14 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.00003126 50.0
DYD3_k127_2093207_2 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000003207 273.0
DYD3_k127_2093207_3 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008649,GO:0008757,GO:0009383,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.176 0.00000000000000000000000000000000000000000000000000000000000000000000000000001516 273.0
DYD3_k127_2093207_4 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000006379 229.0
DYD3_k127_2093207_5 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000009215 213.0
DYD3_k127_2093207_6 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.00000000000000000000000000000000000000000000000000000005777 215.0
DYD3_k127_2093207_7 Stationary phase survival protein, YicC family, YicC_N and DUF1732 domain-containing - - - 0.0000000000000000000000000000000000000000000000000000004147 205.0
DYD3_k127_2093207_8 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.0000000000000000000000000000000000000000000000000000008214 202.0
DYD3_k127_2093207_9 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.0000000000000000000000000000000000000000000003727 178.0
DYD3_k127_2105610_0 Amidohydrolase family K01464 - 3.5.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001081 297.0
DYD3_k127_2105610_1 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01459 - 3.5.1.77 0.000000000000000000000000000000000000021 148.0
DYD3_k127_2127823_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005056 408.0
DYD3_k127_2127823_1 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K01872,K07050 - 6.1.1.7 0.0000000000000000001603 88.0
DYD3_k127_2127823_2 nucleic-acid-binding protein containing a Zn-ribbon K07068 - - 0.000000000000004533 79.0
DYD3_k127_2127823_3 hydrolase or acyltransferase of alpha beta superfamily K21159 - - 0.0000004136 58.0
DYD3_k127_2133141_0 Taurine catabolism dioxygenase TauD, TfdA family K03119,K22303 - 1.14.11.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000162 429.0
DYD3_k127_2133141_1 PFAM aldo keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003349 357.0
DYD3_k127_2133141_2 PFAM L-carnitine dehydratase bile acid-inducible protein F K07749,K18702 - 2.8.3.16,2.8.3.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 314.0
DYD3_k127_2133141_3 COGs COG3485 Protocatechuate 3 4-dioxygenase beta subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001877 255.0
DYD3_k127_2133141_4 Enoyl-CoA hydratase/isomerase K01715 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000002231 238.0
DYD3_k127_2133141_5 Acyl- CoA dehydrogenase type 2 domain - - - 0.00000000000000000000000000000000000000000000000000000000000004009 217.0
DYD3_k127_2133141_6 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000003821 166.0
DYD3_k127_2133141_7 trans-aconitate 2-methyltransferase activity K00598,K02169 - 2.1.1.144,2.1.1.197 0.00000000000001415 88.0
DYD3_k127_2153554_0 phosphorelay sensor kinase activity - - - 0.0000000000000000000000000000000000000000000000000000002578 204.0
DYD3_k127_2153554_1 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000003834 124.0
DYD3_k127_2154995_0 PFAM NAD-dependent epimerase dehydratase K00091 - 1.1.1.219 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006755 367.0
DYD3_k127_2154995_1 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003364 316.0
DYD3_k127_2154995_2 Glucose dehydrogenase C-terminus K00008 - 1.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000246 302.0
DYD3_k127_2154995_3 Alcohol dehydrogenase GroES-like domain K00008 - 1.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000485 301.0
DYD3_k127_2154995_4 Squalene/phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.0000000000000000000000000000000000000000000000000000000000000000000000001127 257.0
DYD3_k127_2154995_5 Lipid A 3-O-deacylase (PagL) - - - 0.0000755 52.0
DYD3_k127_2163185_0 Transketolase, pyrimidine binding domain K11381,K21416 - 1.2.4.4 2.488e-227 723.0
DYD3_k127_2163185_1 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 - 6.1.1.20 0.00000000000000000000000000000000000000000001525 176.0
DYD3_k127_2163185_2 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.00000000000000001276 87.0
DYD3_k127_2163185_3 nerve growth factor signaling pathway K08062,K21486 GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0003712,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006355,GO:0006357,GO:0007154,GO:0007165,GO:0007264,GO:0007265,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016020,GO:0019219,GO:0019222,GO:0019899,GO:0019900,GO:0019901,GO:0023052,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031625,GO:0031974,GO:0031981,GO:0032991,GO:0035556,GO:0042826,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043254,GO:0044087,GO:0044389,GO:0044421,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045171,GO:0045893,GO:0045935,GO:0045944,GO:0048518,GO:0048522,GO:0050750,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051716,GO:0060255,GO:0065007,GO:0070013,GO:0070325,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 - 0.0000000000000001521 87.0
DYD3_k127_2163185_4 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.00000000002011 68.0
DYD3_k127_2163185_5 Redoxin K03386 - 1.11.1.15 0.00000003535 57.0
DYD3_k127_2164428_0 Belongs to the IlvD Edd family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004044 288.0
DYD3_k127_2164428_1 metal-dependent hydrolase with the TIM-barrel fold - - - 0.0000000000000000000000000000000000000000000000000000000003492 211.0
DYD3_k127_2184956_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 5.004e-207 659.0
DYD3_k127_2184956_1 Riboflavin kinase K11753 - 2.7.1.26,2.7.7.2 0.000000000000000000000000000000000000000000000000000000000000000000001422 246.0
DYD3_k127_2184956_2 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000000000000002491 243.0
DYD3_k127_2184956_3 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.0000000000000000000000000000000008355 133.0
DYD3_k127_2196411_0 histidine kinase, HAMP K13598 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001507 567.0
DYD3_k127_2196411_1 response regulator K13599 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006786 542.0
DYD3_k127_2205752_0 NMT1/THI5 like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002774 498.0
DYD3_k127_2205752_1 ABC-type nitrate sulfonate bicarbonate transport system permease component K02050 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001705 347.0
DYD3_k127_2205752_2 Putative oxidoreductase C terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004288 257.0
DYD3_k127_2207646_0 Glycogen debranching enzyme - - - 2.704e-257 826.0
DYD3_k127_2207646_1 choline dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009666 542.0
DYD3_k127_2207646_2 transcription factor binding K15836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 500.0
DYD3_k127_2207646_3 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004346 319.0
DYD3_k127_2207646_4 Single cache domain 3 - - - 0.00000000000000000000000000000000000000007515 175.0
DYD3_k127_2207646_5 RNA polymerase sigma factor K03088 - - 0.00000000000000000000000000000000003469 146.0
DYD3_k127_2207646_6 - - - - 0.000000000000004493 79.0
DYD3_k127_2207646_7 Nitroreductase family - - - 0.0000000000179 68.0
DYD3_k127_2207646_8 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000008755 60.0
DYD3_k127_2207646_9 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000006571 61.0
DYD3_k127_222088_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 GO:0000287,GO:0003674,GO:0003824,GO:0003852,GO:0005488,GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016746,GO:0019752,GO:0030145,GO:0030955,GO:0031420,GO:0040007,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0046872,GO:0046912,GO:0046914,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.3.13 3.048e-237 748.0
DYD3_k127_222088_1 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 8.777e-211 662.0
DYD3_k127_222088_10 Thioesterase-like superfamily - - - 0.000000000000000000000000000000000000000000000000000001005 202.0
DYD3_k127_222088_11 COG0111 Phosphoglycerate dehydrogenase and related K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000002895 204.0
DYD3_k127_222088_12 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.00000000000000000000000000000000000000009851 166.0
DYD3_k127_222088_13 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000002962 96.0
DYD3_k127_222088_14 RNA recognition motif - - - 0.0000000000000000004446 93.0
DYD3_k127_222088_2 Molydopterin dinucleotide binding domain K07306,K07309,K07310,K08352 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009390,GO:0009897,GO:0009986,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0022900,GO:0031224,GO:0031226,GO:0031233,GO:0031237,GO:0032991,GO:0033797,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0071944,GO:0098552,GO:0098567,GO:1902494 1.8.5.3,1.8.5.5,1.97.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002436 601.0
DYD3_k127_222088_3 PFAM amidohydrolase K07045 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009125 533.0
DYD3_k127_222088_4 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 425.0
DYD3_k127_222088_5 Substrate binding domain of ABC-type glycine betaine transport system K05845,K05846 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004189 422.0
DYD3_k127_222088_6 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00015 - 1.1.1.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 398.0
DYD3_k127_222088_7 DinB superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002784 398.0
DYD3_k127_222088_8 Histidine-specific methyltransferase, SAM-dependent K18911 - 2.1.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000055 298.0
DYD3_k127_222088_9 abc transporter atp-binding protein K05847 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001159 282.0
DYD3_k127_2231129_0 Dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002824 360.0
DYD3_k127_2231129_1 Protein of unknown function (DUF1847) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007008 305.0
DYD3_k127_2231129_2 PFAM AMP-dependent synthetase and ligase K02182 - 6.2.1.48 0.000000000000000000000000000000000000000000000000000000000000007697 221.0
DYD3_k127_2231129_3 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.00000000000000001494 89.0
DYD3_k127_2240597_0 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 289.0
DYD3_k127_2240597_1 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003682 276.0
DYD3_k127_2240597_10 methylglyoxal synthase K01734 - 4.2.3.3 0.00000000000000000000000000000000000001051 148.0
DYD3_k127_2240597_11 acetyltransferase - - - 0.0000000000000000000000000000001077 140.0
DYD3_k127_2240597_12 acetyltransferase K00657 - 2.3.1.57 0.0000000000000000005825 93.0
DYD3_k127_2240597_13 Acetyltransferase (GNAT) domain - - - 0.00000000006869 70.0
DYD3_k127_2240597_14 - - - - 0.000000001482 66.0
DYD3_k127_2240597_2 Cupin domain - - - 0.000000000000000000000000000000000000000000000000000008199 191.0
DYD3_k127_2240597_3 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000004879 196.0
DYD3_k127_2240597_5 MarR family transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000102 175.0
DYD3_k127_2240597_6 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000007314 171.0
DYD3_k127_2240597_8 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000009968 169.0
DYD3_k127_2240597_9 PFAM Vitamin K epoxide reductase - - - 0.0000000000000000000000000000000000000001985 170.0
DYD3_k127_2252277_0 Phosphoglucomutase/phosphomannomutase, C-terminal domain K01835 - 5.4.2.2 1.096e-268 840.0
DYD3_k127_2252277_1 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 521.0
DYD3_k127_2252277_2 Transglutaminase-like superfamily - - - 0.0000000000000000000000000000000000008878 140.0
DYD3_k127_2252277_3 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 0.0000000000000000000000000000000009546 132.0
DYD3_k127_2252277_4 Protein of unknown function (DUF2459) - - - 0.0000000000000000000001086 114.0
DYD3_k127_2252277_5 Protein of unknown function (DUF2459) - - - 0.0001078 46.0
DYD3_k127_2254176_0 L-carnitine dehydratase bile acid-inducible protein F K07749 - 2.8.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003365 496.0
DYD3_k127_2254176_1 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008056 372.0
DYD3_k127_2254176_2 Phosphoenolpyruvate phosphomutase K20454 - 4.1.3.32 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006979 292.0
DYD3_k127_2254176_3 PFAM extracellular solute-binding protein family 3 K02030,K09969,K10001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007293 257.0
DYD3_k127_2254176_4 HpcH/HpaI aldolase/citrate lyase family K02510 - 4.1.2.52 0.0000000000000000000000000000000000000000000000000000000000112 210.0
DYD3_k127_2254176_5 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K14161 - - 0.00000000000000000000000000000000000000000000000000000000008276 220.0
DYD3_k127_2254176_6 Belongs to the DNA polymerase type-C family. DnaE2 subfamily K14162 - 2.7.7.7 0.000000000000000000000000000000000000000005533 158.0
DYD3_k127_2254176_7 - - - - 0.000000000000000000000000000000000027 156.0
DYD3_k127_2254176_8 recA bacterial DNA recombination protein - - - 0.000000000000000000000002064 111.0
DYD3_k127_2276634_0 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002072 377.0
DYD3_k127_2276634_1 Conserved protein of dim6 ntab family - - - 0.0000000000000000000000000000000000000000000000000000000000009982 217.0
DYD3_k127_2276634_2 acyl-L-homoserine-lactone lactonohydrolase activity K13075 - 3.1.1.81 0.00000000000000000000000000000000000000000000000000000002618 212.0
DYD3_k127_2276634_3 PFAM cyclic nucleotide-binding K16922 - - 0.00000000000000000000000165 117.0
DYD3_k127_2276634_4 helix_turn_helix, cAMP Regulatory protein K10914 GO:0000166,GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006109,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010565,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010675,GO:0016020,GO:0017076,GO:0019219,GO:0019222,GO:0030312,GO:0030551,GO:0030552,GO:0030554,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0032993,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043565,GO:0044212,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0062012,GO:0065007,GO:0071944,GO:0080090,GO:0097159,GO:0097367,GO:0140110,GO:1901265,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2000874,GO:2001141 - 0.0000000000000000002917 93.0
DYD3_k127_2279128_0 oxidoreductase activity, acting on CH-OH group of donors - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009155 296.0
DYD3_k127_2279128_1 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005083 253.0
DYD3_k127_2279128_2 Rieske [2Fe-2S] domain K19982 - - 0.000000000000000002185 92.0
DYD3_k127_2292658_0 Belongs to the enoyl-CoA hydratase isomerase family K07516 - 1.1.1.35 4.091e-282 889.0
DYD3_k127_2292658_1 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002197 610.0
DYD3_k127_2292658_10 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.000000000000000000000004576 103.0
DYD3_k127_2292658_11 TM2 domain - - - 0.00000000000000003286 88.0
DYD3_k127_2292658_12 Aromatic-ring-opening dioxygenase LigAB, LigA subunit - - - 0.0000000000000001558 85.0
DYD3_k127_2292658_13 Mannose-6-phosphate isomerase - - - 0.00004392 51.0
DYD3_k127_2292658_2 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008069 338.0
DYD3_k127_2292658_3 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006966 284.0
DYD3_k127_2292658_4 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006084 257.0
DYD3_k127_2292658_5 Catalytic LigB subunit of aromatic ring-opening dioxygenase K04101 - 1.13.11.8 0.0000000000000000000000000000000000000000000000000000000000000000000002492 250.0
DYD3_k127_2292658_6 Thioesterase K07107 - - 0.0000000000000000000000000000000000000000000000000000000000001039 224.0
DYD3_k127_2292658_7 peroxiredoxin activity K01607 - 4.1.1.44 0.0000000000000000000000000000000000000000002821 168.0
DYD3_k127_2292658_8 Transglycosylase SLT domain - - - 0.00000000000000000000000000000002089 139.0
DYD3_k127_2292658_9 Aldo/keto reductase family - - - 0.000000000000000000000001388 107.0
DYD3_k127_2297634_0 tRNA synthetases class I (W and Y) K01867 GO:0003674,GO:0003824,GO:0004812,GO:0004830,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006436,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002881 414.0
DYD3_k127_2297634_1 Prephenate dehydratase K14170 - 4.2.1.51,5.4.99.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004266 288.0
DYD3_k127_2297634_2 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002083 268.0
DYD3_k127_2297634_3 Belongs to the pseudouridine synthase RsuA family K06178,K06183 - 5.4.99.19,5.4.99.22 0.0000000000000000000000000000000000000000000000000000000000000006369 228.0
DYD3_k127_2297634_4 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.0000000000000000000000000000000000009864 150.0
DYD3_k127_2297634_5 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.0000000000000000000000000000000006187 141.0
DYD3_k127_2303826_0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00261 - 1.4.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009601 307.0
DYD3_k127_2303826_1 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001583 278.0
DYD3_k127_2303826_2 Predicted integral membrane protein (DUF2269) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004322 273.0
DYD3_k127_2349660_0 B12 binding domain K00548 - 2.1.1.13 6.709e-279 872.0
DYD3_k127_2349660_1 Methyltransferase domain - - - 0.00000006601 63.0
DYD3_k127_2354345_0 Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) K00768 - 2.4.2.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001355 345.0
DYD3_k127_2354345_1 Cobinamide kinase / cobinamide phosphate guanyltransferase K02231 - 2.7.1.156,2.7.7.62 0.00000000000000000000000000000000000000003725 160.0
DYD3_k127_2354345_2 abc-type fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.0000000000000000000000000000000000001577 160.0
DYD3_k127_2355131_0 Rieske 2Fe-2S - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 406.0
DYD3_k127_2355131_1 Catalytic LigB subunit of aromatic ring-opening dioxygenase K15065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001692 297.0
DYD3_k127_2355131_2 Rieske [2Fe-2S] domain - - - 0.0000000000000000000000000000000000000000000000000000000000000007946 222.0
DYD3_k127_2355131_3 - - - - 0.0000000000000000000000000000000000005784 148.0
DYD3_k127_2355131_4 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.000000000000000000000000000002905 127.0
DYD3_k127_2356397_0 C-terminus of AA_permease K03294 - - 1.614e-228 718.0
DYD3_k127_2356397_1 - - - - 0.000000009122 60.0
DYD3_k127_2358404_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.0 1311.0
DYD3_k127_2358404_1 Fumarate reductase flavoprotein C-term - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008107 307.0
DYD3_k127_2358404_2 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000002627 237.0
DYD3_k127_2358404_3 Thioredoxin-like - - - 0.00000000000000000000000006392 122.0
DYD3_k127_2358404_4 Sulfur oxidation protein SoxY K17226 - - 0.000000000002387 76.0
DYD3_k127_2358404_5 Sulphur oxidation protein SoxZ K17227 - - 0.0009015 46.0
DYD3_k127_2359010_0 COGs COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001809 504.0
DYD3_k127_2359010_1 NAD binding K00333,K05579,K13378 GO:0003674,GO:0003824,GO:0003954,GO:0008137,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004927 305.0
DYD3_k127_2359010_10 Psort location Cytoplasmic, score 8.96 K00759 - 2.4.2.7 0.000000000000000002525 96.0
DYD3_k127_2359010_2 Dienelactone hydrolase family K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007922 276.0
DYD3_k127_2359010_3 NIPSNAP - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004201 254.0
DYD3_k127_2359010_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000003816 223.0
DYD3_k127_2359010_5 Thioesterase-like superfamily K07107 - - 0.0000000000000000000000000000000000000000002013 165.0
DYD3_k127_2359010_6 6-phosphogluconate dehydrogenase K00042 - 1.1.1.60 0.00000000000000000000000000000000000000003099 164.0
DYD3_k127_2359010_7 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.000000000000000000000000000000001302 133.0
DYD3_k127_2359010_8 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient - - - 0.00000000000000000000000000002878 123.0
DYD3_k127_2359010_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330,K05574 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0050136,GO:0055114,GO:0098796,GO:1902494 1.6.5.3 0.00000000000000000000000585 106.0
DYD3_k127_2380346_0 gluconolactonase activity K01053 - 3.1.1.17 1.026e-217 683.0
DYD3_k127_2380346_1 Protein of unknown function, DUF547 - - - 0.00000000000000000000000000000000000000000000000000000000000000001637 236.0
DYD3_k127_2380346_2 radical SAM domain protein - - - 0.00000000000000000000000000000000000001889 163.0
DYD3_k127_2380346_3 Protein of unknown function, DUF417 - - - 0.00000000000000000000000000000000000007121 161.0
DYD3_k127_2380346_4 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000000000000000001557 109.0
DYD3_k127_2380346_5 PFAM sigma-70 region 2 domain protein K03088 - - 0.00004432 55.0
DYD3_k127_2395697_0 Rieske [2Fe-2S] domain K21323 - 1.14.13.229,1.14.19.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008027 597.0
DYD3_k127_2395697_1 PFAM Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000001802 194.0
DYD3_k127_2395697_2 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.00000000000000000000000004427 118.0
DYD3_k127_2395697_3 Histidine kinase - - - 0.000000000000001002 88.0
DYD3_k127_2395697_4 Putative peptidoglycan binding domain K07126,K13582 - - 0.00000002724 61.0
DYD3_k127_2411262_0 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005042 434.0
DYD3_k127_2411262_1 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004273 329.0
DYD3_k127_2411262_2 endonuclease activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 324.0
DYD3_k127_2411262_3 N-terminal half of MaoC dehydratase - - - 0.0000000000000000000000000000000000000000000000000000000000007115 214.0
DYD3_k127_2411262_4 Acetyltransferase (GNAT) domain - - - 0.00000000002526 64.0
DYD3_k127_2412381_0 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002065 408.0
DYD3_k127_2412381_1 SPFH domain-Band 7 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 370.0
DYD3_k127_2412381_2 - - - - 0.0000002689 63.0
DYD3_k127_2423173_0 General secretory system II protein E domain protein K02652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002263 619.0
DYD3_k127_2423173_1 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006586 324.0
DYD3_k127_2423173_10 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07657 - - 0.000004902 57.0
DYD3_k127_2423173_11 - - - - 0.000005695 58.0
DYD3_k127_2423173_12 PFAM ABC transporter related K01995 - - 0.00001376 51.0
DYD3_k127_2423173_13 Putative 2OG-Fe(II) oxygenase - - - 0.0002238 52.0
DYD3_k127_2423173_2 Two component signalling adaptor domain K02487,K06596 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002861 317.0
DYD3_k127_2423173_3 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004283 251.0
DYD3_k127_2423173_4 GTP binding K06883 GO:0008150,GO:0032879,GO:0032880,GO:0050789,GO:0065007 - 0.00000000000000000000000000000000000000000000000000000000000000000000001611 246.0
DYD3_k127_2423173_5 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000005085 147.0
DYD3_k127_2423173_6 Branched-chain amino acid transport system / permease component K01997 - - 0.000000000000000000000000000000004451 135.0
DYD3_k127_2423173_7 Roadblock/LC7 domain - - - 0.000000000000000000000000000008475 126.0
DYD3_k127_2423173_8 Abc transporter K01996 - - 0.000000000000000000508 94.0
DYD3_k127_2423173_9 Roadblock/LC7 domain K07131 - - 0.000002384 55.0
DYD3_k127_2431934_0 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007343 475.0
DYD3_k127_2431934_1 Phosphotransferase enzyme family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003556 453.0
DYD3_k127_2431934_2 PFAM alanine racemase domain protein K20757 - 4.3.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009796 378.0
DYD3_k127_2431934_3 Major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002733 355.0
DYD3_k127_2431934_4 Protein of unknown function (DUF3750) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007062 288.0
DYD3_k127_2431934_5 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.00000000000000000000000000000000000000000000000000000000000000000116 237.0
DYD3_k127_2431934_6 ribonucleoside-diphosphate reductase activity K07735 - - 0.0000000000000000000000000000000000000000000000000001226 208.0
DYD3_k127_2431934_7 Endoribonuclease L-PSP - - - 0.00000000000000000000000000000000001151 145.0
DYD3_k127_2437434_0 radical SAM domain protein K21551 - 2.1.1.106 2.261e-204 647.0
DYD3_k127_2437434_1 TIGRFAM N-acetyl sugar amidotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003066 557.0
DYD3_k127_2437434_10 Winged helix-turn-helix DNA-binding - - - 0.0000000000000000000000000000009947 129.0
DYD3_k127_2437434_11 sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family K13006,K19429 - - 0.000000000000000000000000000001021 130.0
DYD3_k127_2437434_12 - - - - 0.000000000000000000000000000002059 135.0
DYD3_k127_2437434_14 Polysaccharide biosynthesis protein - - - 0.00000399 59.0
DYD3_k127_2437434_2 N-acylneuraminate-9-phosphate synthase activity K01654,K18430 GO:0003674,GO:0003824,GO:0005975,GO:0008150,GO:0008152,GO:0009058,GO:0016051,GO:0016740,GO:0016765,GO:0044238,GO:0071704,GO:1901576 2.5.1.101,2.5.1.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001573 355.0
DYD3_k127_2437434_3 Protein of unknown function DUF115 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006704 331.0
DYD3_k127_2437434_4 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005597 311.0
DYD3_k127_2437434_5 UDP-N-acetylglucosamine 2-epimerase activity K01791,K13019,K18429 GO:0003674,GO:0003824,GO:0004553,GO:0005975,GO:0008150,GO:0008152,GO:0009058,GO:0016051,GO:0016787,GO:0016798,GO:0044238,GO:0071704,GO:1901576 3.2.1.184,5.1.3.14,5.1.3.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003314 300.0
DYD3_k127_2437434_6 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000002681 222.0
DYD3_k127_2437434_7 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.00000000000000000000000000000000000000000000000000005805 212.0
DYD3_k127_2437434_8 cytidylyl-transferase K00983,K15899,K18431 GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009987,GO:0016051,GO:0016740,GO:0016772,GO:0016779,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.7.43,2.7.7.81,2.7.7.82 0.0000000000000000000000000000000000000000000000109 181.0
DYD3_k127_2437434_9 Cytidylyltransferase K18431 - 2.7.7.82 0.00000000000000000000000000000000000000000000006767 184.0
DYD3_k127_2438540_0 Proton-conducting membrane transporter K00342,K05575 - 1.6.5.3 3.652e-207 655.0
DYD3_k127_2438540_1 Aminotransferase class-III K01845 - 5.4.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008923 483.0
DYD3_k127_2438540_2 PFAM Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002836 426.0
DYD3_k127_2438540_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343,K05573 GO:0003674,GO:0003824,GO:0003954,GO:0008137,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002235 448.0
DYD3_k127_2438540_4 AIR synthase related protein, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 326.0
DYD3_k127_2438540_5 Proton-translocating NADH-quinone oxidoreductase, chain L K00341 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000002128 225.0
DYD3_k127_2438540_6 Rhs element vgr protein - - - 0.00000000000000000000000000000000000000000000000466 183.0
DYD3_k127_2438540_7 - - - - 0.000144 50.0
DYD3_k127_2439373_0 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007254 361.0
DYD3_k127_2439373_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.000000000000000000000000000000000000000004277 167.0
DYD3_k127_2439373_2 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.000000000000000000000000004561 118.0
DYD3_k127_2440217_0 DEAD-like helicases superfamily K11927 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002294 586.0
DYD3_k127_2440217_1 AMP-binding enzyme K00666,K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009348 536.0
DYD3_k127_2440217_2 AMP-binding protein K01895 - 6.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002436 361.0
DYD3_k127_2440217_3 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 323.0
DYD3_k127_2440217_4 Enoyl-CoA hydratase/isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001165 289.0
DYD3_k127_2440217_5 Luciferase-like monooxygenase K00320 - 1.5.98.2 0.000000000000000000000000000000000000000000000000001259 198.0
DYD3_k127_2440217_6 Enoyl-CoA hydratase/isomerase K01692 GO:0003674,GO:0003824,GO:0004300,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0019395,GO:0019752,GO:0030258,GO:0032787,GO:0034440,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:1901575 4.2.1.17 0.00000000000000000000000000000000000000002787 175.0
DYD3_k127_2440217_7 YjgF/chorismate_mutase-like, putative endoribonuclease - - - 0.0000000000000000000000000000000001811 138.0
DYD3_k127_2440217_8 ATPases associated with a variety of cellular activities K01996,K11958 - - 0.000000000002743 72.0
DYD3_k127_2444848_0 Amidohydrolase K03392 - 4.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004654 337.0
DYD3_k127_2444848_1 PFAM Branched-chain amino acid transport system permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000425 305.0
DYD3_k127_2444848_2 Branched-chain amino acid transport system / permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001015 270.0
DYD3_k127_2444848_3 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000009581 250.0
DYD3_k127_2444848_4 ABC transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000001144 230.0
DYD3_k127_2446336_0 AAA ATPase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 450.0
DYD3_k127_2446336_1 cellulose binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 362.0
DYD3_k127_2446336_2 LVIVD repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000334 289.0
DYD3_k127_2446336_3 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000005803 216.0
DYD3_k127_2446336_4 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000000000000000000000000000006546 178.0
DYD3_k127_2446336_5 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.000000000000000000000000000000000000000000000006395 177.0
DYD3_k127_2446336_6 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000005791 158.0
DYD3_k127_2446336_7 - - - - 0.000000001085 70.0
DYD3_k127_244833_0 Belongs to the ABC transporter superfamily K02032,K10823 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001558 379.0
DYD3_k127_244833_1 Belongs to the ABC transporter superfamily K02031 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003742 321.0
DYD3_k127_244833_2 COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001474 276.0
DYD3_k127_2470241_0 acyl-CoA dehydrogenase K00252 - 1.3.8.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006999 318.0
DYD3_k127_2470241_1 Major Facilitator Superfamily K08223 - - 0.00000000000000000000000000000000000000000319 164.0
DYD3_k127_2472796_0 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000499 356.0
DYD3_k127_2472796_1 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000001275 261.0
DYD3_k127_2472796_2 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.00000000000002286 83.0
DYD3_k127_2472796_3 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.0000000000001125 70.0
DYD3_k127_2487594_0 PFAM AMP-dependent synthetase and ligase K00666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004659 427.0
DYD3_k127_2487594_1 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007357 320.0
DYD3_k127_2487594_2 geranylgeranyl reductase - - - 0.00000000000000000000000000000000000000000000000002307 192.0
DYD3_k127_2487594_3 Pfam Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000004919 192.0
DYD3_k127_2487594_4 - - - - 0.00000000000000003236 88.0
DYD3_k127_2491724_0 Belongs to the peptidase M16 family K07263 - - 0.0000000000000000000000000000000000000000000000000000000000005896 236.0
DYD3_k127_2491724_1 KR domain - - - 0.000000000000000000000000000000000000000000002403 178.0
DYD3_k127_2491724_2 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.000000000000000000000000000003377 122.0
DYD3_k127_2491724_3 PFAM Peptidase M16 inactive domain - - - 0.00000000000000000000000000002954 127.0
DYD3_k127_249626_0 Glycosyl transferase family 21 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002383 364.0
DYD3_k127_249626_1 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000008902 202.0
DYD3_k127_249626_2 Uncharacterized protein conserved in bacteria (DUF2064) K09931 - - 0.0000000000000000007453 89.0
DYD3_k127_249626_3 TonB-dependent Receptor Plug - - - 0.00003 56.0
DYD3_k127_2499234_0 PFAM Hydantoinase B oxoprolinase K01474 - 3.5.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005281 331.0
DYD3_k127_2499234_1 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006594 318.0
DYD3_k127_2499234_2 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.000000000000000000000001429 109.0
DYD3_k127_2506547_0 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007494 514.0
DYD3_k127_2506547_1 Phenylacetic acid catabolic protein K02609 - 1.14.13.149 0.000000000000000000000000000000000000000000000000000000000000001593 246.0
DYD3_k127_2506547_2 glycosyl transferase group 1 - - - 0.0000000000000003111 83.0
DYD3_k127_2529363_0 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.000000000000000000000000000000000000000000000000000000000000002405 226.0
DYD3_k127_2529363_1 Zn peptidase - - - 0.00000000000000000000000000000000000000000000000000000002798 220.0
DYD3_k127_2537726_0 PFAM amidohydrolase 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 344.0
DYD3_k127_2537726_1 Oxidoreductase - GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005770,GO:0006810,GO:0008150,GO:0008152,GO:0012505,GO:0016192,GO:0016197,GO:0016482,GO:0016491,GO:0031410,GO:0031982,GO:0042147,GO:0043226,GO:0043227,GO:0043229,GO:0044424,GO:0044444,GO:0044464,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055114,GO:0097708 - 0.0000000000000000000000000000000000000000000000000000000203 204.0
DYD3_k127_2537726_2 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000358 210.0
DYD3_k127_2542841_0 PFAM Aminotransferase class I and II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008585 362.0
DYD3_k127_2542841_1 Thiamine pyrophosphate enzyme, central domain - - - 0.00000000000000000000000000000000000000000000001116 179.0
DYD3_k127_2544655_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002146 292.0
DYD3_k127_2561681_0 Biotin-lipoyl like K01960,K01965,K01968 GO:0003674,GO:0003824,GO:0004075,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016053,GO:0016874,GO:0016879,GO:0019216,GO:0019217,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032787,GO:0042304,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046394,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:1901576 6.4.1.1,6.4.1.3,6.4.1.4 0.00000000000000000000000001329 117.0
DYD3_k127_2561681_1 PFAM ABC transporter related K02028 - 3.6.3.21 0.00000000000000000000000004938 115.0
DYD3_k127_2561681_2 TIGRFAM polar amino acid ABC transporter, inner membrane subunit K02029,K10002 - - 0.0000000000000000005202 90.0
DYD3_k127_2561681_3 Serine aminopeptidase, S33 K01055 - 3.1.1.24 0.0000000000005073 79.0
DYD3_k127_2561681_4 Regulatory protein, FmdB - - - 0.000000001171 64.0
DYD3_k127_2567136_0 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 320.0
DYD3_k127_2567136_1 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004288 282.0
DYD3_k127_2567136_2 Belongs to the MraZ family K03925 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.000000000000000000000000001718 117.0
DYD3_k127_2578121_0 Luciferase-like monooxygenase - - - 8.906e-198 623.0
DYD3_k127_2578121_1 Malic enzyme, NAD binding domain K00027 - 1.1.1.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001347 597.0
DYD3_k127_2578121_2 Lactonase, 7-bladed beta-propeller - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002257 431.0
DYD3_k127_2578121_3 Alcohol dehydrogenase GroES-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009916 284.0
DYD3_k127_2578121_4 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004134 282.0
DYD3_k127_2578121_5 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000002127 127.0
DYD3_k127_2578121_6 Domain of unknown function (DUF1330) - - - 0.00000000000000000000000000003833 118.0
DYD3_k127_2578121_7 lyase activity - - - 0.0000001706 62.0
DYD3_k127_2622084_0 Adenylate and Guanylate cyclase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006918 342.0
DYD3_k127_2622084_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002864 308.0
DYD3_k127_2622084_2 PFAM OsmC family protein - - - 0.000000000000000000000000000000000000000000000000000000000000003135 228.0
DYD3_k127_2622084_3 Molecular chaperone. Has ATPase activity K04079 GO:0000302,GO:0000303,GO:0000305,GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0009987,GO:0010035,GO:0016020,GO:0030312,GO:0033554,GO:0034599,GO:0034614,GO:0042221,GO:0044464,GO:0050896,GO:0051716,GO:0070887,GO:0071450,GO:0071451,GO:0071944,GO:1901700,GO:1901701 - 0.000000000000000000000000000000000000000000000000000000000003273 215.0
DYD3_k127_2622084_4 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.0000000000000000000000000006696 130.0
DYD3_k127_2635783_0 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 571.0
DYD3_k127_2635783_1 CoA-transferase family III K07544,K07749 - 2.8.3.15,2.8.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003211 396.0
DYD3_k127_2635783_2 cytochrome p450 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 390.0
DYD3_k127_2635783_3 Glucose / Sorbosone dehydrogenase K00117,K21430 GO:0003674,GO:0003824,GO:0005488,GO:0005509,GO:0005575,GO:0005623,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016901,GO:0019842,GO:0030288,GO:0030313,GO:0031406,GO:0031975,GO:0036094,GO:0042597,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0044464,GO:0046872,GO:0048037,GO:0048038,GO:0055114,GO:0070968,GO:0097159,GO:1901363 1.1.5.2 0.0000000000000000000000000001316 118.0
DYD3_k127_2644560_0 Threonine synthase K01733 - 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001411 580.0
DYD3_k127_2644560_1 DegT/DnrJ/EryC1/StrS aminotransferase family K10907 - - 0.0000000000000000000000000000000000000000000000000000000002747 206.0
DYD3_k127_2644560_2 Molybdopterin converting factor, small subunit K03636 - - 0.0000000000000000000000000000000124 130.0
DYD3_k127_2657349_0 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007786 487.0
DYD3_k127_2657349_1 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 308.0
DYD3_k127_2657349_2 Gram-negative-bacterium-type cell outer membrane assembly - - - 0.000000000000001985 82.0
DYD3_k127_2657349_3 Tautomerase enzyme - - - 0.00000001038 64.0
DYD3_k127_265829_0 Metallo-beta-lactamase superfamily K01069 GO:0003674,GO:0003824,GO:0004416,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006082,GO:0006090,GO:0006518,GO:0006575,GO:0006749,GO:0006750,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016787,GO:0016788,GO:0016790,GO:0019184,GO:0019752,GO:0031974,GO:0032787,GO:0034641,GO:0042398,GO:0043043,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0051186,GO:0051188,GO:0070013,GO:0071704,GO:1901564,GO:1901566,GO:1901576 3.1.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000001234 259.0
DYD3_k127_265829_1 KR domain K03793 - 1.5.1.33 0.0000000000000000000000000000000000000000000000000000002104 205.0
DYD3_k127_265829_2 Diacylglycerol kinase catalytic domain - - - 0.00000000000000000000000000000000000000000000000006336 194.0
DYD3_k127_265829_3 Protein of unknown function (DUF502) - - - 0.000000000000000000000000000000000000000000002322 182.0
DYD3_k127_265829_4 hydrolase of the alpha beta superfamily K07018 - - 0.000000000000000000000000000003859 127.0
DYD3_k127_265829_5 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.000000000000001671 80.0
DYD3_k127_2659694_0 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 387.0
DYD3_k127_2659694_1 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006765 381.0
DYD3_k127_2659694_2 Protein of unknown function (DUF512) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001988 352.0
DYD3_k127_2659694_3 CDP-alcohol phosphatidyltransferase K08744 - 2.7.8.41 0.000000000000000000000000000000004129 135.0
DYD3_k127_2671563_0 Pfam:UPF0118 - - - 0.00000000000000000000000000000000000000001604 166.0
DYD3_k127_2671563_1 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.00000000001761 68.0
DYD3_k127_2671563_2 exo-alpha-(2->6)-sialidase activity - - - 0.0004631 45.0
DYD3_k127_2701258_0 COGs COG1022 Long-chain acyl-CoA synthetase (AMP-forming) K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008994 519.0
DYD3_k127_2701258_1 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 454.0
DYD3_k127_2701258_2 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit K03821 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 316.0
DYD3_k127_2701258_3 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000004026 236.0
DYD3_k127_2701258_4 N-terminal half of MaoC dehydratase K17865 - 4.2.1.55 0.00000000000000000000000000000000001398 149.0
DYD3_k127_2701258_5 PFAM PHA accumulation regulator DNA-binding protein - - - 0.000000000000000000000188 108.0
DYD3_k127_2701258_6 PFAM thioesterase superfamily - - - 0.000000000000000003969 90.0
DYD3_k127_2701258_7 polyhydroxyalkanoic acid synthase, PhaR subunit - - - 0.000000003597 65.0
DYD3_k127_2705287_0 Thiamine pyrophosphate enzyme, central domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000004122 243.0
DYD3_k127_2705287_1 Thioredoxin domain - - - 0.000000000000000000000000000000132 128.0
DYD3_k127_2709430_0 Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02481,K07714 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000285 415.0
DYD3_k127_2709430_1 PFAM peptidase S1 and S6, chymotrypsin Hap K04771,K04772 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 352.0
DYD3_k127_2709430_10 Bacterial regulatory protein, Fis family K10943 - - 0.0000000000000000000000007529 108.0
DYD3_k127_2709430_11 Two component transcriptional regulator, winged helix family - - - 0.0000000000000000000000007668 117.0
DYD3_k127_2709430_12 Cytochrome C' - - - 0.000000000000003125 82.0
DYD3_k127_2709430_2 CHASE2 K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002303 315.0
DYD3_k127_2709430_3 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000001163 220.0
DYD3_k127_2709430_4 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000008748 208.0
DYD3_k127_2709430_5 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000002069 177.0
DYD3_k127_2709430_6 Pfam Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000001379 175.0
DYD3_k127_2709430_7 Cytidylate kinase-like family - - - 0.0000000000000000000000000000000000000133 154.0
DYD3_k127_2709430_8 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.0000000000000000000000000002164 131.0
DYD3_k127_2709430_9 response regulator K02481,K07713 - - 0.000000000000000000000000162 112.0
DYD3_k127_2725087_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168,K07479 GO:0003674,GO:0003824,GO:0003916,GO:0003917,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006265,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016853,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360 5.99.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006156 468.0
DYD3_k127_2725087_1 TIGRFAM DNA protecting protein DprA K04096 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002134 252.0
DYD3_k127_2746317_0 Hydantoinase B/oxoprolinase K01474 - 3.5.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007626 293.0
DYD3_k127_2746317_1 Hydantoinaseoxoprolinase domain protein K01473 - 3.5.2.14 0.0000000000000000000000000000000000000000000000000000000000000004151 228.0
DYD3_k127_2748861_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 5.144e-234 737.0
DYD3_k127_2748861_1 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000255 392.0
DYD3_k127_2748861_2 Peptidase family M50 K11749 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001713 323.0
DYD3_k127_2748861_3 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003251 274.0
DYD3_k127_2748861_4 Catalyzes the reversible phosphorylation of UMP to UDP K09903 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000003948 237.0
DYD3_k127_2748861_5 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000008779 209.0
DYD3_k127_2748861_6 Belongs to the CDS family K00981 GO:0003674,GO:0003824,GO:0004605,GO:0005575,GO:0005618,GO:0005623,GO:0006139,GO:0006220,GO:0006221,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016020,GO:0016024,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0030312,GO:0034641,GO:0034654,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044281,GO:0044464,GO:0045017,GO:0046341,GO:0046471,GO:0046474,GO:0046483,GO:0046486,GO:0055086,GO:0070567,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.41 0.00000000000000000000000000000000000000000000003351 184.0
DYD3_k127_2748861_7 Ferredoxin - - - 0.00000000000000003051 96.0
DYD3_k127_2748861_8 RimP C-terminal SH3 domain K09748 - - 0.00000174 51.0
DYD3_k127_2756504_0 Predicted membrane protein (DUF2238) K08984 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001377 276.0
DYD3_k127_2756504_1 Redoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007571 245.0
DYD3_k127_2756504_2 OsmC-like protein - - - 0.00000000000000000000000000000000000000000000000000000000455 205.0
DYD3_k127_2756504_3 F420H(2)-dependent quinone reductase - - - 0.0000000000000000000000000000002019 136.0
DYD3_k127_2756504_4 acyl-CoA dehydrogenase - - - 0.0000000000000000001659 96.0
DYD3_k127_2756504_5 phosphatase activity K01560,K07025 - 3.8.1.2 0.000001323 57.0
DYD3_k127_276264_0 Belongs to the DegT DnrJ EryC1 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007274 339.0
DYD3_k127_276264_1 Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001237 284.0
DYD3_k127_276264_2 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K13015 - 1.1.1.136 0.000000000000000000000000000000000000000000000000000009196 206.0
DYD3_k127_2778421_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 1.16e-219 694.0
DYD3_k127_2778421_1 Acyl-CoA dehydrogenase, C-terminal domain K00248 - 1.3.8.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008981 447.0
DYD3_k127_2778421_2 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008758 424.0
DYD3_k127_2778421_3 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18,4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 407.0
DYD3_k127_2778421_4 electron transfer flavoprotein, alpha subunit K03522,K22432 - 1.3.1.108 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001452 295.0
DYD3_k127_2778421_5 Electron transfer flavoprotein domain K03521 - - 0.000000000000000000000000000000000000000000000000000000000000003059 226.0
DYD3_k127_2778421_6 Amino-transferase class IV K00826 - 2.6.1.42 0.0000000000000000000000000000000000000005204 169.0
DYD3_k127_2778421_7 UbiC transcription regulator-associated domain protein - - - 0.000000000000000000000000000000000007067 149.0
DYD3_k127_2787980_0 PFAM cytochrome bd ubiquinol oxidase subunit I K00425 - 1.10.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006386 544.0
DYD3_k127_2787980_1 oxidase, subunit K00426 - 1.10.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009785 336.0
DYD3_k127_2787980_2 translation release factor activity K15034 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0003824,GO:0004045,GO:0005488,GO:0006412,GO:0006414,GO:0006415,GO:0006417,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016043,GO:0016150,GO:0016787,GO:0016788,GO:0019222,GO:0019538,GO:0022411,GO:0031323,GO:0031326,GO:0032268,GO:0032984,GO:0034248,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044877,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0052689,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0072344,GO:0080090,GO:0097159,GO:0140098,GO:0140101,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2000112 - 0.0000000000000000000000000000001906 134.0
DYD3_k127_2787980_3 Bacterial PH domain - - - 0.0003359 49.0
DYD3_k127_2809629_0 helicase superfamily c-terminal domain K03727 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009056,GO:0009057,GO:0009987,GO:0016020,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019439,GO:0030312,GO:0034641,GO:0034655,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0070035,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:1901360,GO:1901361,GO:1901575 - 2.654e-231 757.0
DYD3_k127_2809629_1 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000002733 164.0
DYD3_k127_2820254_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K06001 - 4.2.1.20 7.731e-215 680.0
DYD3_k127_2820254_1 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002064 479.0
DYD3_k127_2820254_2 Aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K03520 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001373 306.0
DYD3_k127_2820254_3 MaoC like domain - - - 0.00000000000000000000000000000000000000000000000000000001196 219.0
DYD3_k127_2820254_4 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000003066 179.0
DYD3_k127_2820254_5 Major Facilitator Superfamily - - - 0.00000000000000000000000000002218 128.0
DYD3_k127_2820254_6 PFAM Methyltransferase type 11 - - - 0.000001062 55.0
DYD3_k127_2829844_0 Histidine kinase-like ATPases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009479 491.0
DYD3_k127_2829844_1 Belongs to the adenylyl cyclase class-4 guanylyl cyclase family K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004337 445.0
DYD3_k127_2829844_2 Ketopantoate reductase K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001376 398.0
DYD3_k127_2829844_3 cheY-homologous receiver domain - - - 0.00000000000000000000000001608 124.0
DYD3_k127_2829844_4 Methionine synthase K00549 - 2.1.1.14 0.00002114 56.0
DYD3_k127_283440_0 PFAM fumarylacetoacetate (FAA) hydrolase K16856 - 4.3.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006228 356.0
DYD3_k127_283440_1 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002108 253.0
DYD3_k127_283440_2 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000002961 196.0
DYD3_k127_283440_3 Aromatic-ring-opening dioxygenase LigAB, LigA subunit K04100 - 1.13.11.8 0.0002451 48.0
DYD3_k127_2868932_0 Aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K03520 - 1.2.5.3 6.825e-303 962.0
DYD3_k127_2868932_1 epoxide hydrolase K01253 - 3.3.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003921 406.0
DYD3_k127_2868932_2 carbon monoxide dehydrogenase K03519 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000004799 255.0
DYD3_k127_2868932_3 PFAM ABC transporter related K01996 - - 0.000000000000000000000000000000000000000000000000000000000000006221 225.0
DYD3_k127_2868932_4 PFAM Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000007138 190.0
DYD3_k127_2868932_5 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000002041 203.0
DYD3_k127_2868932_6 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K01995 - - 0.00000000000000000000000000000000000000000002391 165.0
DYD3_k127_2868932_7 - - - - 0.0000000000000000003447 100.0
DYD3_k127_2868932_8 - - - - 0.00000000006549 74.0
DYD3_k127_2869781_0 Belongs to the arginase family K01480 - 3.5.3.11 0.00000000000000000000000000000000000000000000000000000000000000002786 233.0
DYD3_k127_2869781_1 PFAM Pyruvoyl-dependent arginine decarboxylase K02626 - 4.1.1.19 0.000000000000000000000000000000000000007054 151.0
DYD3_k127_28800_0 Homoserine dehydrogenase, NAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002352 312.0
DYD3_k127_28800_1 Domain of unknown function (DUF4105) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009031 259.0
DYD3_k127_28800_2 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000004087 203.0
DYD3_k127_28800_3 Stage II sporulation protein K06381 - - 0.00000000000000000000000000000000000000000000000000000005731 215.0
DYD3_k127_28800_4 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000007395 205.0
DYD3_k127_28800_5 Protein of unknown function (DUF520) K09767 - - 0.00000000000000000000000000000000000000000000000000005273 191.0
DYD3_k127_28800_6 DJ-1/PfpI family - - - 0.000000000000000000000000000000000000000000000001852 179.0
DYD3_k127_28800_7 - - - - 0.0000000000000000000000000000000938 128.0
DYD3_k127_288086_0 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 1.953e-205 649.0
DYD3_k127_288086_1 Archease protein family (MTH1598/TM1083) - - - 0.0006524 42.0
DYD3_k127_2883210_0 Alanine dehydrogenase/PNT, N-terminal domain K00324 - 1.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002665 511.0
DYD3_k127_2883210_1 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 458.0
DYD3_k127_2883210_2 Catalyzes the conversion of dihydroorotate to orotate K00226 - 1.3.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 430.0
DYD3_k127_2883210_3 NAD(P)+ transhydrogenase (AB-specific) activity K00324 - 1.6.1.2 0.00000000000000000000000000006184 131.0
DYD3_k127_2883210_4 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.00000000002023 65.0
DYD3_k127_2888965_0 Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family K01428 - 3.5.1.5 7.644e-279 874.0
DYD3_k127_2888965_1 TIGRFAM urea ABC transporter, ATP-binding protein UrtE K11963 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001869 260.0
DYD3_k127_2888965_2 Belongs to the urease beta subunit family K01427,K01428,K01429,K01430,K14048 GO:0003674,GO:0003824,GO:0006807,GO:0008150,GO:0008152,GO:0009039,GO:0009056,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0016787,GO:0016810,GO:0016811,GO:0019627,GO:0034641,GO:0042221,GO:0043419,GO:0043603,GO:0043605,GO:0044237,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0050896,GO:0051716,GO:0070887,GO:0071241,GO:0071248,GO:0071281,GO:0071704,GO:0071941,GO:1901564,GO:1901565,GO:1901575 3.5.1.5 0.000000000000000000000000000000000000000000002271 165.0
DYD3_k127_2888965_3 PFAM Urease beta subunit K01429,K14048 - 3.5.1.5 0.000000000000000000000000000000000000000000006718 165.0
DYD3_k127_2888965_4 Belongs to the ClpA ClpB family K03696 - - 0.0008562 43.0
DYD3_k127_289696_0 phosphorelay signal transduction system K02481 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 498.0
DYD3_k127_289696_1 Alpha amylase, catalytic domain K06044 - 5.4.99.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003429 479.0
DYD3_k127_289696_2 transmembrane transport - - - 0.00000000000000000000000000000000000000000000000000000001564 205.0
DYD3_k127_289696_3 DNA-binding protein with PD1-like DNA-binding motif K06934 - - 0.00000000000000000000000000000002479 143.0
DYD3_k127_289696_4 Regulator K22010 GO:0000160,GO:0003674,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0007154,GO:0007165,GO:0008150,GO:0009987,GO:0016020,GO:0023052,GO:0030312,GO:0035556,GO:0040007,GO:0043167,GO:0043168,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071944 - 0.0000000000000000002711 97.0
DYD3_k127_2919786_0 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003245 344.0
DYD3_k127_2919786_1 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001727 276.0
DYD3_k127_2919786_2 domain protein K01992,K06994 - - 0.00000000000000000000000000000000000000000000000000000000000002321 225.0
DYD3_k127_2919786_3 Aldolase/RraA K10218 - 4.1.3.17 0.000000000000000000000000000000000000000000000000001247 190.0
DYD3_k127_2919786_4 3-demethylubiquinone-9 3-O-methyltransferase activity K20444 - - 0.00000000000000000000000000000000000000000000002214 181.0
DYD3_k127_2919786_5 - - - - 0.00000000000000000000000000000000000001801 147.0
DYD3_k127_2919786_6 Predicted membrane protein (DUF2079) - - - 0.0000000000000000000000000001793 134.0
DYD3_k127_2919786_7 - - - - 0.000006658 50.0
DYD3_k127_2934669_0 Arginosuccinate synthase K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003442 622.0
DYD3_k127_2934669_1 Aminotransferase class-III K00821 GO:0003674,GO:0005488,GO:0005515,GO:0008144,GO:0019842,GO:0030170,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363 2.6.1.11,2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000134 463.0
DYD3_k127_2934669_2 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003579 342.0
DYD3_k127_2934669_3 Belongs to the ComB family K05979 - 3.1.3.71 0.0000000000000000006944 91.0
DYD3_k127_293828_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000004519 224.0
DYD3_k127_293828_1 - - - - 0.000000000000000000000000000000000000000000000001205 186.0
DYD3_k127_293828_2 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000000000000000000000000000000000007321 166.0
DYD3_k127_293828_3 PFAM SNARE associated Golgi protein - - - 0.000000000000000000000000002809 120.0
DYD3_k127_293828_4 HWE histidine kinase - - - 0.00000000000004923 83.0
DYD3_k127_2944313_0 Alanine dehydrogenase/PNT, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000356 298.0
DYD3_k127_2944313_1 Ketopantoate reductase PanE/ApbA C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000017 281.0
DYD3_k127_2944313_2 Amidase - - - 0.0000000000000000000000000000000000000000000000000301 195.0
DYD3_k127_2946239_0 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002079 372.0
DYD3_k127_2946239_1 Glucose dehydrogenase C-terminus - - - 0.00000000000000000000000000000000000000000000000000000003086 221.0
DYD3_k127_2946239_2 Thioredoxin - - - 0.00000000000000000000002112 108.0
DYD3_k127_2946239_3 Zinc metalloprotease (Elastase) K20274 - - 0.00000133 54.0
DYD3_k127_2952320_0 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.000000000000000000000000000000000000000000000000000000000000000000007948 247.0
DYD3_k127_2952320_1 PFAM peptidase - - - 0.00000000000000000000000000000000000000007583 156.0
DYD3_k127_2952320_2 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 - 1.8.1.4 0.00000000000000000362 84.0
DYD3_k127_2956539_0 Flavin-binding monooxygenase-like K03379,K21730 - 1.14.13.160,1.14.13.22 1.005e-263 821.0
DYD3_k127_2956539_1 FAD dependent oxidoreductase K13796 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005516 567.0
DYD3_k127_2956539_2 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000623 501.0
DYD3_k127_2956539_3 PLD-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003032 440.0
DYD3_k127_2956539_4 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003418 364.0
DYD3_k127_2956539_5 PLD-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000341 318.0
DYD3_k127_2956539_6 TIGRFAM chromate transporter, chromate ion transporter (CHR) family K07240 - - 0.0000000000000000000000000000000000001441 144.0
DYD3_k127_2956539_7 Diguanylate cyclase - - - 0.000000000000000000000000000000000004965 156.0
DYD3_k127_2964391_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874,K01890 GO:0003674,GO:0003824,GO:0004812,GO:0004825,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006431,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10,6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001386 545.0
DYD3_k127_2964391_1 domain protein - - - 0.000000000000000000000000000000000000000000000000221 193.0
DYD3_k127_2964391_2 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.0000000000000000000000000000000000000167 149.0
DYD3_k127_2964391_3 TIGRFAM DNA polymerase III, delta prime subunit K02341 - 2.7.7.7 0.00000000000000000000000000002388 132.0
DYD3_k127_2980137_0 hydrolase (HAD superfamily) K01560,K07025,K08723 - 3.1.3.5,3.8.1.2 0.00000000000000000000000000000000000000000000000002063 198.0
DYD3_k127_2980137_1 Belongs to the helicase family. UvrD subfamily - - - 0.00000000000000000000000000000000000006952 153.0
DYD3_k127_2980137_2 Peptidase M16 domain protein - - - 0.00000000000000000000000001003 116.0
DYD3_k127_2980691_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 3.499e-243 765.0
DYD3_k127_2980691_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012,K00066 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.1.1.132,1.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002 575.0
DYD3_k127_2980691_2 3-beta hydroxysteroid dehydrogenase/isomerase family K01710,K08678 - 4.1.1.35,4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002211 483.0
DYD3_k127_2980691_3 Polysaccharide biosynthesis protein K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007422 347.0
DYD3_k127_2980691_4 Nucleotidyl transferase K00966 - 2.7.7.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004437 293.0
DYD3_k127_2980691_5 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.00000000000000000000000000000000000000000000000000000000000000002545 229.0
DYD3_k127_2980691_6 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0000000000000000000000000000000000000000000000000005474 196.0
DYD3_k127_2980691_7 NAD dependent epimerase/dehydratase family K05281 - 1.3.1.45 0.000000000000000000000000001101 120.0
DYD3_k127_2980691_8 Trm112p-like protein K09791 - - 0.000000006852 67.0
DYD3_k127_3003747_0 FeS assembly protein SufB K09014 - - 1.932e-246 768.0
DYD3_k127_3003747_1 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007424 592.0
DYD3_k127_3003747_2 AAA domain K07028 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007396 376.0
DYD3_k127_3003747_3 TIGRFAM FeS assembly ATPase SufC K09013 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007196 367.0
DYD3_k127_3003747_4 COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component K09015 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007698 364.0
DYD3_k127_3003747_5 NifU-like N terminal domain K04488 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006807,GO:0006873,GO:0006875,GO:0006879,GO:0008150,GO:0008152,GO:0008198,GO:0009987,GO:0010467,GO:0016740,GO:0016782,GO:0019538,GO:0019725,GO:0030003,GO:0036455,GO:0042592,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0044424,GO:0044464,GO:0046872,GO:0046914,GO:0046916,GO:0048037,GO:0048878,GO:0050801,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0051604,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0071704,GO:0097428,GO:0098771,GO:1901564 - 0.0000000000000000000000000000000000000000000002215 187.0
DYD3_k127_3003747_6 Iron-sulfur cluster assembly protein - - - 0.00000000000000000000000000000000872 130.0
DYD3_k127_3003747_7 intermembrane phospholipid transfer K07323 - - 0.000000000000000000008929 101.0
DYD3_k127_3003747_8 oxidation-reduction process - - - 0.000000004148 57.0
DYD3_k127_3003747_9 Belongs to the aldehyde dehydrogenase family K13821 - 1.2.1.88,1.5.5.2 0.00001405 48.0
DYD3_k127_3024363_0 ABC-type sugar transport system periplasmic component K02027,K05813 - - 1.898e-209 672.0
DYD3_k127_3024363_1 COG3839 ABC-type sugar transport systems, ATPase components K05816 - 3.6.3.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002033 357.0
DYD3_k127_3042474_0 phosphonate ABC transporter, inner membrane subunit K02042 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004285 407.0
DYD3_k127_3042474_1 Phosphonate ABC transporter K02044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003479 379.0
DYD3_k127_3042474_2 Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system K02041 - 3.6.3.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 323.0
DYD3_k127_3042474_3 phosphonate metabolism protein PhnM K06162 - 3.6.1.63 0.0000000000000000000000000000000000003524 142.0
DYD3_k127_3042474_4 Inositol monophosphatase family K01092 - 3.1.3.25 0.000000000000000000000000000000000001431 151.0
DYD3_k127_3047755_0 Aminotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000006142 230.0
DYD3_k127_3047755_1 NAD binding K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000005862 165.0
DYD3_k127_3065247_0 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K01663,K02500,K11755 GO:0000105,GO:0000107,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009382,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0032991,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494,GO:1990234 3.5.4.19,3.6.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000233 355.0
DYD3_k127_3065247_1 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009459 265.0
DYD3_k127_3065247_2 TIGRFAM Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 - 5.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000001109 243.0
DYD3_k127_3065247_3 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.000000000000000000000000000000000000000000000000000000000000000000156 236.0
DYD3_k127_3065247_4 AAA domain, putative AbiEii toxin, Type IV TA system K02065 - - 0.000000000000000000000000000000000000000000000000000000000000005528 225.0
DYD3_k127_3065247_5 Histidine biosynthesis bifunctional protein HisIE K01496,K11755 - 3.5.4.19,3.6.1.31 0.00000000000000000000000000000000000000000000000000000009912 205.0
DYD3_k127_3065247_6 MlaD protein K02067 - - 0.00000000000000000000000000000000000001038 165.0
DYD3_k127_3065247_7 Imidazoleglycerol-phosphate dehydratase K01693 GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.19 0.000000000000000000001377 96.0
DYD3_k127_3065247_8 - - - - 0.00000000000265 78.0
DYD3_k127_3096690_0 Citrate synthase, C-terminal domain K01647 - 2.3.3.1 8.078e-200 633.0
DYD3_k127_3096690_1 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000001067 269.0
DYD3_k127_3096690_2 ADP-ribosylglycohydrolase K05521 - 3.2.2.24 0.0000000000000000000000000001638 126.0
DYD3_k127_3106401_0 FAD dependent oxidoreductase K19191 - 1.5.3.19 1.193e-221 698.0
DYD3_k127_3106401_1 Gamma-glutamyltranspeptidase - - - 9.791e-219 692.0
DYD3_k127_3106401_2 ABC transporter transmembrane region K06147,K18890 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 571.0
DYD3_k127_3106401_3 ABC transporter transmembrane region K06147,K18889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002306 441.0
DYD3_k127_3106401_4 GYD domain - - - 0.0000000000000000000000000009205 117.0
DYD3_k127_3106401_5 methylated DNA-protein cysteine methyltransferase K07443 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0005488,GO:0005515,GO:0019899,GO:0097159,GO:1901363 - 0.000000000000000000004788 100.0
DYD3_k127_3106401_6 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.0001028 45.0
DYD3_k127_3106401_7 metal-dependent hydrolase with the TIM-barrel fold K07048 - - 0.0005221 45.0
DYD3_k127_3120084_0 Proteasomal ATPase OB/ID domain K07184,K07777,K12065,K13525,K13527 GO:0000302,GO:0000502,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009405,GO:0009987,GO:0010035,GO:0010498,GO:0010499,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0019941,GO:0022623,GO:0022624,GO:0030163,GO:0030312,GO:0032991,GO:0033554,GO:0034599,GO:0034614,GO:0035690,GO:0042221,GO:0042493,GO:0042802,GO:0043170,GO:0043335,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044419,GO:0044424,GO:0044464,GO:0044877,GO:0050896,GO:0051409,GO:0051603,GO:0051704,GO:0051716,GO:0070628,GO:0070887,GO:0071241,GO:0071704,GO:0071731,GO:0071732,GO:0071944,GO:0097366,GO:0140030,GO:0140035,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902170,GO:1902494,GO:1905368,GO:1905369 2.7.13.3 1.977e-232 735.0
DYD3_k127_3120084_1 Family 5 K02035,K15580 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004946 405.0
DYD3_k127_3120084_2 Pup-ligase protein K20814 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0006464,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0010498,GO:0016787,GO:0016810,GO:0016811,GO:0017076,GO:0018193,GO:0018205,GO:0019538,GO:0019941,GO:0030163,GO:0030554,GO:0032446,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0036211,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0051603,GO:0070490,GO:0070647,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 3.5.1.119 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003526 336.0
DYD3_k127_3120084_3 Binding-protein-dependent transport system inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006364 294.0
DYD3_k127_3120084_4 PFAM Binding-protein-dependent transport system inner membrane component K02034,K15582 - - 0.00000000000000000000000000000000000000000000000000000000000000000002921 242.0
DYD3_k127_3120084_5 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000004751 242.0
DYD3_k127_3131285_0 ABC transporter substrate-binding protein K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002932 554.0
DYD3_k127_3131285_1 Branched-chain amino acid transport system / permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 362.0
DYD3_k127_3131285_2 Branched-chain amino acid transport system / permease component K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002133 353.0
DYD3_k127_3131285_3 ATPases associated with a variety of cellular activities K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001394 264.0
DYD3_k127_3131285_4 ABC transporter K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001684 268.0
DYD3_k127_3131285_5 - - - - 0.000000005438 59.0
DYD3_k127_3151553_0 dehydrogenase - - - 7.887e-206 661.0
DYD3_k127_3151553_1 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000002337 189.0
DYD3_k127_316287_0 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005575 394.0
DYD3_k127_316287_1 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000001091 197.0
DYD3_k127_316443_0 DNA topoisomerase II activity K03167 - 5.99.1.3 3.047e-210 664.0
DYD3_k127_3179373_0 Acyl-CoA dehydrogenase, N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 346.0
DYD3_k127_3179373_1 ATP-binding region, ATPase domain protein - - - 0.0000000000000000000000000000000000000000000000001042 193.0
DYD3_k127_3179373_2 PFAM acyl-CoA dehydrogenase domain protein K00255,K11731 - 1.3.8.8 0.000000000000000000000000008727 114.0
DYD3_k127_3186053_0 Methionine synthase K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002239 407.0
DYD3_k127_3186053_1 CoA-transferase family III K07749 - 2.8.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004139 360.0
DYD3_k127_3186053_2 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000461 330.0
DYD3_k127_3186053_3 amidohydrolase K07045 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007568 317.0
DYD3_k127_3186053_4 TIM-barrel fold metal-dependent hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006429 274.0
DYD3_k127_3186053_5 DinB family - - - 0.000000000000000000000000000000000007816 147.0
DYD3_k127_3186053_6 B3/4 domain - - - 0.000002544 52.0
DYD3_k127_3186053_7 branched-chain amino acid permease (azaleucine resistance) - - - 0.0001715 55.0
DYD3_k127_3187257_0 Cysteine desulfurase K11717 - 2.8.1.7,4.4.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005594 452.0
DYD3_k127_3187257_1 NfeD-like C-terminal, partner-binding K07403 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006218 402.0
DYD3_k127_3187257_2 Belongs to the arginase family K01480 - 3.5.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004624 338.0
DYD3_k127_3187257_3 PFAM Band 7 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002731 323.0
DYD3_k127_3187257_4 TIGRFAM SUF system FeS assembly protein, NifU family K04488 - - 0.00000000000000000004381 98.0
DYD3_k127_3187257_5 'Molybdopterin - - - 0.000000000000000002043 87.0
DYD3_k127_3187257_6 Phage integrase family - - - 0.00000000000004929 82.0
DYD3_k127_3192998_0 Transporter associated domain K03699,K06189 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001629 353.0
DYD3_k127_3192998_1 Sugar (and other) transporter K07552 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 347.0
DYD3_k127_3192998_2 activity, protein serine threonine kinase activity, protein-tyrosine kinase activity, ATP binding, regulation of transcription, DNA-dependent, protein amino acid phosphorylation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001761 359.0
DYD3_k127_3192998_3 TIGRFAM hydrolase, TatD family K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005548 268.0
DYD3_k127_3192998_4 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.00000000000000000000000000000000000000000000000000000001338 206.0
DYD3_k127_3192998_5 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000000001938 167.0
DYD3_k127_3192998_6 Protein of unknown function (DUF2914) - - - 0.000000000000000000000000002136 129.0
DYD3_k127_3192998_7 - - - - 0.0000000000000004499 90.0
DYD3_k127_3199316_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004409 391.0
DYD3_k127_3199316_1 SMP-30/Gluconolaconase/LRE-like region K01053 - 3.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003375 317.0
DYD3_k127_3199316_2 Major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003331 302.0
DYD3_k127_32059_0 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 386.0
DYD3_k127_32059_1 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000001371 287.0
DYD3_k127_32059_2 Cytochrome C assembly protein - - - 0.0000000000000000000000000000000003614 146.0
DYD3_k127_32059_3 Uroporphyrin-III C tetrapyrrole (Corrin Porphyrin) methyltransferase K02302,K02303,K13542 - 1.3.1.76,2.1.1.107,4.2.1.75,4.99.1.4 0.00000000000000000000000005046 113.0
DYD3_k127_32059_4 L-seryl-tRNA selenium transferase K01042 - 2.9.1.1 0.000000000000007407 76.0
DYD3_k127_32059_5 Necessary for formate dehydrogenase activity K02380 - - 0.00000000008395 68.0
DYD3_k127_3214071_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 7.636e-237 745.0
DYD3_k127_3214071_1 Magnesium chelatase, subunit ChlI C-terminal K07391 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002332 572.0
DYD3_k127_3214071_2 Transglycosylase SLT domain - - - 0.000000000000000000000000000000000000000000007808 171.0
DYD3_k127_3214071_3 Isochorismatase family - - - 0.0000000000000000000000000000000000000000002892 165.0
DYD3_k127_3214071_4 helix_turn_helix, cAMP Regulatory protein K10914 - - 0.00000000000000000000000000000000000001307 153.0
DYD3_k127_3214071_5 Histidine kinase - - - 0.00000000000000000007828 96.0
DYD3_k127_3214071_6 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23 0.0000000000000000003889 88.0
DYD3_k127_3216708_0 peptidyl-tyrosine sulfation - - - 0.000000000000000000000001322 117.0
DYD3_k127_3216708_1 Hydantoinase/oxoprolinase N-terminal region K01469,K01473 - 3.5.2.14,3.5.2.9 0.00000000000001833 75.0
DYD3_k127_3223354_0 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004828 314.0
DYD3_k127_3223354_1 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0000027,GO:0000049,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000005678 213.0
DYD3_k127_3223354_2 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.000000000000000000000000000000003941 133.0
DYD3_k127_3223354_3 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.0000009881 50.0
DYD3_k127_3237120_0 Belongs to the 'phage' integrase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007417 356.0
DYD3_k127_3237120_1 Putative metal-binding domain of cation transport ATPase K01533 - 3.6.3.4 0.00000000000000000000000000000000000000000000001607 176.0
DYD3_k127_3237120_4 Cytochrome oxidase maturation protein cbb3-type - - - 0.00000003169 63.0
DYD3_k127_3237120_5 Belongs to the 'phage' integrase family - - - 0.0000005263 51.0
DYD3_k127_323848_0 PFAM Phosphoglycerate mutase K02226 - 3.1.3.73 0.000000000000000000000000000000000000000005738 169.0
DYD3_k127_323848_2 S4 RNA-binding domain K04762 - - 0.0000000000000000000000000003505 121.0
DYD3_k127_323848_3 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate K02233 - 2.7.8.26 0.000000000000000000004837 100.0
DYD3_k127_323848_4 PFAM DoxX family protein K15977 - - 0.000000000000000003651 96.0
DYD3_k127_323848_5 DNA segregation ATPase FtsK SpoIIIE and related K03466 - - 0.00006198 49.0
DYD3_k127_323848_6 pilus assembly protein PilW - - - 0.00008614 55.0
DYD3_k127_3243193_0 Xanthine dehydrogenase K03520 - 1.2.5.3 8.582e-280 896.0
DYD3_k127_3243193_1 AMP-binding enzyme C-terminal domain K16876 - 6.2.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003933 522.0
DYD3_k127_3243193_2 ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003458 268.0
DYD3_k127_3243193_3 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001204 264.0
DYD3_k127_3243193_4 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000002287 290.0
DYD3_k127_3243193_5 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003901 258.0
DYD3_k127_3243193_6 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000342 244.0
DYD3_k127_3243193_7 Belongs to the enoyl-CoA hydratase isomerase family K16880 - - 0.00000000000000000000000000000000000000000000000000000000000000000002271 248.0
DYD3_k127_3243193_8 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000005177 245.0
DYD3_k127_3243193_9 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000000000003667 226.0
DYD3_k127_3244441_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002937 622.0
DYD3_k127_3244441_1 His Kinase A (phosphoacceptor) domain K02484,K07636,K07768 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000027 515.0
DYD3_k127_3252222_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002894 390.0
DYD3_k127_3252222_1 PFAM Stage II sporulation K06381 - - 0.000000000000000000000000000000000000000000000000000000000001043 230.0
DYD3_k127_3252222_2 Putative tRNA binding domain K06878 - - 0.0000000000000000000000000000000000008676 146.0
DYD3_k127_3252222_3 Protein of unknown function (DUF2905) - - - 0.00000000000001541 86.0
DYD3_k127_3253614_0 YaeQ - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004661 253.0
DYD3_k127_3253614_1 Belongs to the UPF0178 family K09768 - - 0.0000000000000000000000000000000000000000000000000009535 196.0
DYD3_k127_3253614_2 copper-translocating P-type ATPase K17686 - 3.6.3.54 0.000000000000000000000000000000001179 130.0
DYD3_k127_3253614_3 deoxyhypusine monooxygenase activity K05384,K05386 - - 0.000000000000000000000000000219 125.0
DYD3_k127_3253614_4 COG0457 FOG TPR repeat - - - 0.000000000000008188 78.0
DYD3_k127_3253614_5 PFAM AMP-dependent synthetase and ligase - - - 0.00001486 51.0
DYD3_k127_3253614_6 signal transduction histidine kinase - - - 0.00004562 54.0
DYD3_k127_3256331_0 Cupin - - - 0.00000000000000000000000000000000000000000000000000000000000000269 225.0
DYD3_k127_3256331_1 Catalytic LigB subunit of aromatic ring-opening dioxygenase K04101,K05713,K15755 - 1.13.11.16,1.13.11.8 0.00000000000000000000000002426 120.0
DYD3_k127_3256331_2 Aldehyde oxidase and xanthine dehydrogenase K03520 - 1.2.5.3 0.0000000000000000001117 92.0
DYD3_k127_3261828_0 Drug exporters of the RND superfamily K06994 - - 1.502e-236 754.0
DYD3_k127_3261828_1 Belongs to the 'phage' integrase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001695 381.0
DYD3_k127_3261828_2 Acetyltransferase (GNAT) domain - - - 0.0000000000009374 68.0
DYD3_k127_3271375_0 domain, Protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003815 306.0
DYD3_k127_3271375_1 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000003529 231.0
DYD3_k127_3271375_2 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.000000000000000000000000000000000000000003561 157.0
DYD3_k127_3271375_3 - - - - 0.000002322 53.0
DYD3_k127_3322807_0 Zeta toxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006815 286.0
DYD3_k127_3322807_1 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 GO:0003674,GO:0003824,GO:0006002,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016830,GO:0016832,GO:0019637,GO:0044237,GO:0071704,GO:1901135 2.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000784 290.0
DYD3_k127_3322807_2 PFAM PfkB domain protein - - - 0.000000000000000000000000000000000000001311 159.0
DYD3_k127_3322807_3 Cyclophilin-like K09143 - - 0.0000000000000000000000000000000001324 140.0
DYD3_k127_3322807_4 binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription this protein is involved in detoxification and protection against antimicrobial K03088 - - 0.0000000000000000000000001083 113.0
DYD3_k127_3322807_5 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.0000000000000000000009941 104.0
DYD3_k127_3322807_6 Bacterial regulatory protein, Fis family K10126 - - 0.0000000001515 71.0
DYD3_k127_3322807_7 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567,K10778 - 2.1.1.63 0.00001525 53.0
DYD3_k127_332345_0 Bacterial extracellular solute-binding proteins, family 5 Middle - - - 9.992e-212 679.0
DYD3_k127_332345_1 LysE type translocator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002565 336.0
DYD3_k127_332345_2 COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 309.0
DYD3_k127_332345_3 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001721 311.0
DYD3_k127_332345_4 repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006381 293.0
DYD3_k127_332345_5 arylformamidase activity - - - 0.0000000000000000000000000000000000000000000006105 183.0
DYD3_k127_3326991_0 AAA domain (Cdc48 subfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002565 383.0
DYD3_k127_3326991_1 amidohydrolase K21613 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007652 325.0
DYD3_k127_3326991_2 Peptidase dimerisation domain K12941 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007443 316.0
DYD3_k127_3326991_3 VWA domain containing CoxE-like protein K07161 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000267 314.0
DYD3_k127_3326991_4 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002584 300.0
DYD3_k127_3326991_5 PFAM peptidase M48 Ste24p K06013 - 3.4.24.84 0.00000000000000000000000000000000000000000000000000000000000000000000001114 256.0
DYD3_k127_3326991_6 histidine kinase A domain protein K02482 - 2.7.13.3 0.000000000000000000000000000000000000000000000000004191 199.0
DYD3_k127_3326991_7 - - - - 0.0000000000000000577 82.0
DYD3_k127_3326991_8 - - - - 0.000000000000008553 80.0
DYD3_k127_3326991_9 Passenger-associated-transport-repeat - - - 0.00005994 56.0
DYD3_k127_3338535_0 Receptor family ligand binding region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002496 476.0
DYD3_k127_3338535_1 HAD-hyrolase-like K01838 - 5.4.2.6 0.0000000000000000000000000000000000001413 150.0
DYD3_k127_3338535_2 Thiopurine S-methyltransferase K00569 - 2.1.1.67 0.00000000000000000000000000000000002588 150.0
DYD3_k127_3338704_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695,K03696 - - 0.0 1144.0
DYD3_k127_3338704_1 Amidohydrolase K07045 - - 6.85e-212 669.0
DYD3_k127_3338704_2 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006145 303.0
DYD3_k127_3338704_3 PFAM Hydantoinase oxoprolinase K01473 - 3.5.2.14 0.00000000000000000000000000000000000000000000008591 175.0
DYD3_k127_3338704_4 Major Facilitator Superfamily - - - 0.00000000000000000000000000003598 121.0
DYD3_k127_3338704_5 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00000000000000001975 89.0
DYD3_k127_3343173_0 COG0028 Thiamine pyrophosphate-requiring enzymes acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 329.0
DYD3_k127_3348879_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 GO:0003674,GO:0003824,GO:0003861,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009316,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016866,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 4.2.1.33,4.2.1.35 3.413e-231 724.0
DYD3_k127_3348879_1 DNA-binding transcription factor activity K02521 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002962 287.0
DYD3_k127_3363531_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002056 550.0
DYD3_k127_3363531_1 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.0000000000000000000000002851 122.0
DYD3_k127_3363531_2 N-(5'phosphoribosyl)anthranilate (PRA) isomerase K01817 - 5.3.1.24 0.000000000000002272 77.0
DYD3_k127_337412_0 PFAM Prenyltransferase squalene oxidase K06045 - 4.2.1.129,5.4.99.17 1.83e-267 838.0
DYD3_k127_337412_1 Cell shape determining protein MreB Mrl K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 399.0
DYD3_k127_337412_10 MaoC like domain - - - 0.00000000000000000000000000000000000000000000000003901 187.0
DYD3_k127_337412_11 Thioesterase - - - 0.0000000000000000000000000000000000000000000000008253 186.0
DYD3_k127_337412_12 Thioredoxin-like domain K03671 - - 0.000000000000000000000000000001251 125.0
DYD3_k127_337412_13 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity K04756 - - 0.00000000000000000007125 91.0
DYD3_k127_337412_2 Mechanosensitive ion channel K22044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 304.0
DYD3_k127_337412_3 Alkyl hydroperoxide reductase K03386 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005039 293.0
DYD3_k127_337412_4 Carbon-nitrogen hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001198 277.0
DYD3_k127_337412_5 Belongs to the MurCDEF family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001033 288.0
DYD3_k127_337412_6 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000003934 243.0
DYD3_k127_337412_7 Enoyl-(Acyl carrier protein) reductase K00059,K10780 - 1.1.1.100,1.3.1.104 0.0000000000000000000000000000000000000000000000000000000000000000001624 238.0
DYD3_k127_337412_8 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01459 - 3.5.1.77 0.000000000000000000000000000000000000000000000000000000000000001806 219.0
DYD3_k127_337412_9 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000003927 219.0
DYD3_k127_3382334_0 Belongs to the TtcA family K21947 - 2.8.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003156 347.0
DYD3_k127_3382334_1 Belongs to the thiolase family K00626,K00632 - 2.3.1.16,2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000003132 262.0
DYD3_k127_3382334_2 NUDIX domain K01515 - 3.6.1.13 0.0000000000000000000000000000000000000000000000000000000000000000005351 233.0
DYD3_k127_3382334_3 ThiS family K03154 - - 0.00000002374 64.0
DYD3_k127_3382334_4 DinB superfamily - - - 0.00000003609 62.0
DYD3_k127_3389875_0 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002211 447.0
DYD3_k127_3389875_1 PFAM SMP-30 Gluconolaconase LRE domain protein K01053,K14274 - 3.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000004931 263.0
DYD3_k127_3389875_2 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase K00567,K01247 - 2.1.1.63,3.2.2.21 0.000000000000000000000000000000000000000000000000000000000000000000000006354 252.0
DYD3_k127_3389875_3 Haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000006798 194.0
DYD3_k127_3392516_0 E1-E2 ATPase K17686 - 3.6.3.54 4.103e-200 651.0
DYD3_k127_3392516_1 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002369 482.0
DYD3_k127_3392516_10 TIGRFAM TRAP transporter, 4TM 12TM fusion protein - - - 0.00006763 47.0
DYD3_k127_3392516_2 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003548 304.0
DYD3_k127_3392516_3 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000533 243.0
DYD3_k127_3392516_4 transcriptional regulator - - - 0.00000000000000000000000000000000001159 142.0
DYD3_k127_3392516_5 DNA-binding transcription factor activity K22298 - - 0.00000000000000000000000000209 117.0
DYD3_k127_3392516_6 - - - - 0.0000000000357 66.0
DYD3_k127_3392516_7 - - - - 0.00000002622 66.0
DYD3_k127_3392516_8 - - - - 0.00000003735 66.0
DYD3_k127_3392516_9 Bacterial regulatory proteins, tetR family - - - 0.00001271 48.0
DYD3_k127_3414574_0 PFAM Glycine sarcosine betaine reductase complex, protein B, alpha and beta subunits K21578 - 1.21.4.4 0.000000000000000000000000000000000000000000000008702 184.0
DYD3_k127_3414574_1 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) K10672 - 1.21.4.2 0.00000000000000000006566 92.0
DYD3_k127_3414574_2 Selenoprotein B, glycine betaine sarcosine D-proline reductase family K10672,K21579 - 1.21.4.2,1.21.4.4 0.00000000000001522 76.0
DYD3_k127_3415367_0 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein K00184 - - 1.08e-201 665.0
DYD3_k127_3415367_1 Aminotransferase class-III K01845 - 5.4.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001523 553.0
DYD3_k127_3415367_10 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.0000000000000000000006139 105.0
DYD3_k127_3415367_11 Molybdopterin converting factor, small subunit K03636 - - 0.000000000000000000004283 96.0
DYD3_k127_3415367_12 Transcriptional regulator - - - 0.000007298 50.0
DYD3_k127_3415367_2 Polysulphide reductase, NrfD K00185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005293 514.0
DYD3_k127_3415367_3 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006217 434.0
DYD3_k127_3415367_4 MoeA N-terminal region (domain I and II) K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003412 340.0
DYD3_k127_3415367_5 - K07112 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000004623 211.0
DYD3_k127_3415367_6 Pfam Polysulphide reductase, NrfD - - - 0.00000000000000000000000000000000000000000000000000000004785 216.0
DYD3_k127_3415367_7 Protein of unknown function (DUF3341) - - - 0.00000000000000000000000000000000004057 140.0
DYD3_k127_3415367_8 proteolysis K21140,K21147 - 2.7.7.80,2.8.1.11,3.13.1.6 0.000000000000000000000000000000004287 135.0
DYD3_k127_3415367_9 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000172 104.0
DYD3_k127_3417392_0 Protein of unknown function, DUF255 K06888 - - 1.425e-240 764.0
DYD3_k127_3417392_1 Glycine cleavage T-protein C-terminal barrel domain K00605,K06980 - 2.1.2.10 0.00000000000000000000000000000000000000000000000000000001068 214.0
DYD3_k127_3417392_2 endonuclease III K00558,K01962,K01963,K03575 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016787,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071944,GO:0090304,GO:1901360 2.1.1.37,2.1.3.15,6.4.1.2 0.00000000000000000000005601 113.0
DYD3_k127_3417392_3 ThiS family K03154 - - 0.0000000000001412 73.0
DYD3_k127_3420671_0 AIR synthase related protein, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001833 415.0
DYD3_k127_3420671_1 Redoxin K03386 - 1.11.1.15 0.00000000000000000000000000000000000000000000005726 170.0
DYD3_k127_3420671_2 Transcriptional regulator, LysR family K02019 - - 0.000000000000000002383 88.0
DYD3_k127_3420671_3 Pfam:DUF385 - - - 0.000000000000004133 86.0
DYD3_k127_3438289_0 Catalyzes the attachment of glycine to tRNA(Gly) K01880 GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0016874,GO:0016875,GO:0046983,GO:0140098,GO:0140101 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006389 567.0
DYD3_k127_3438289_1 Involved in DNA repair and RecF pathway recombination K03584 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0033554,GO:0034641,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 - 0.000000000002436 75.0
DYD3_k127_3442205_0 Cytochrome C and Quinol oxidase polypeptide I K15862 - 1.9.3.1 0.0 1105.0
DYD3_k127_3442205_1 TIGRFAM cytochrome c oxidase, cbb3-type, subunit III K00406 - - 0.00000000000000000000000000000000000000000002581 172.0
DYD3_k127_3442205_2 IG-like fold at C-terminal of FixG, putative oxidoreductase - - - 0.00000000000000000005191 101.0
DYD3_k127_3450898_0 Dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006559 284.0
DYD3_k127_3450898_1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain - - - 0.00000000000000000000000000005468 133.0
DYD3_k127_3450898_2 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain - - - 0.0000000000000407 81.0
DYD3_k127_3456864_0 Putative modulator of DNA gyrase K03592 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0019538,GO:0043170,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000268 441.0
DYD3_k127_3456864_1 Peptidase family M28 K01258 - 3.4.11.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 343.0
DYD3_k127_3456864_2 TatD related DNase K03424 - - 0.0000000000000000000000000000000000000000000001638 179.0
DYD3_k127_3456864_3 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000001312 134.0
DYD3_k127_3456864_4 Adenylate cyclase - - - 0.000000000000000000000000000002049 127.0
DYD3_k127_3456864_5 Transcriptional regulatory protein, C terminal - - - 0.00000000000003212 79.0
DYD3_k127_3471847_0 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 319.0
DYD3_k127_3472992_0 elongation factor Tu domain 2 protein K02355 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001996 396.0
DYD3_k127_3472992_1 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000969 312.0
DYD3_k127_3472992_2 Fumarylacetoacetate (FAA) hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002598 274.0
DYD3_k127_3472992_3 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000004004 239.0
DYD3_k127_3472992_4 PFAM Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.000000000000000000000000000000000000002153 169.0
DYD3_k127_3472992_5 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.000000000000000000000000000000000003856 141.0
DYD3_k127_3479366_0 phosphatidate phosphatase activity K09474,K19302 - 3.1.3.2,3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 325.0
DYD3_k127_3479366_1 COG0346 Lactoylglutathione lyase and related lyases - - - 0.00000000000000000000000000000000000000000000000000000000000000000009837 241.0
DYD3_k127_3479366_2 Translation initiation inhibitor, yjgF family - - - 0.000000000000000000000000000000000000000000000000000000000000001806 219.0
DYD3_k127_3479366_3 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000000000000004304 176.0
DYD3_k127_3479366_4 - - - - 0.0000000000000000000000000000000003145 139.0
DYD3_k127_3479366_5 - - - - 0.00000000000000009576 83.0
DYD3_k127_3480894_0 Amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000324 554.0
DYD3_k127_3480894_1 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003263 358.0
DYD3_k127_3480894_10 acetyl-coa acetyltransferase - - - 0.000000000000000000000002731 102.0
DYD3_k127_3480894_11 His Kinase A (phosphoacceptor) domain K02482 - 2.7.13.3 0.0000000000000000001741 94.0
DYD3_k127_3480894_12 EamA-like transporter family - - - 0.000000000000002558 87.0
DYD3_k127_3480894_13 DNA-(Apurinic or apyrimidinic site) lyase K01142 - 3.1.11.2 0.0000008265 59.0
DYD3_k127_3480894_2 acetyl-coa acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000896 289.0
DYD3_k127_3480894_3 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005084 278.0
DYD3_k127_3480894_4 EamA-like transporter family K15268 - - 0.000000000000000000000000000000000000000000000000000000000000000000001056 266.0
DYD3_k127_3480894_5 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000002409 242.0
DYD3_k127_3480894_6 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000009011 247.0
DYD3_k127_3480894_7 DUF35 OB-fold domain, acyl-CoA-associated - - - 0.0000000000000000000000000000000000000000000000000000000000000003887 235.0
DYD3_k127_3480894_8 Bacterial transcriptional regulator - - - 0.0000000000000000000000000000007033 141.0
DYD3_k127_3480894_9 Histidine kinase A domain protein - - - 0.000000000000000000000002192 113.0
DYD3_k127_3494340_0 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002908 342.0
DYD3_k127_3494340_1 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 285.0
DYD3_k127_3494340_2 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005009 271.0
DYD3_k127_3494340_3 PFAM sigma-54 factor interaction domain-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008989 254.0
DYD3_k127_3494340_4 PFAM Fatty acid desaturase K00507 - 1.14.19.1 0.000000000000000000000000000000000000000000000000000003918 199.0
DYD3_k127_3494340_5 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000009724 211.0
DYD3_k127_3494340_6 - - - - 0.0000000000000000000000004049 106.0
DYD3_k127_3494340_7 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000003486 113.0
DYD3_k127_3494340_8 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0042802,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.0000000001053 66.0
DYD3_k127_3494340_9 cheY-homologous receiver domain - - - 0.000009705 49.0
DYD3_k127_3495081_0 PFAM TRAP C4-dicarboxylate transport system permease DctM subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000271 526.0
DYD3_k127_3495081_1 Bacterial extracellular solute-binding protein, family 7 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 318.0
DYD3_k127_3495081_2 Amidohydrolase K03392,K22213 - 4.1.1.45,4.1.1.52 0.0000000000000000000000000000000000000000000000000000000009527 214.0
DYD3_k127_3495081_3 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000000000000000000000000000002422 151.0
DYD3_k127_3495081_4 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 0.0000007889 50.0
DYD3_k127_3498248_0 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004382 323.0
DYD3_k127_3498248_1 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000257 325.0
DYD3_k127_3498248_2 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002688 284.0
DYD3_k127_3498248_3 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.0000000000000000000000000000000003807 135.0
DYD3_k127_3499198_0 COG1132 ABC-type multidrug transport system, ATPase and permease components K06020,K06021,K06147 - 3.6.3.25,3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001527 432.0
DYD3_k127_3499198_1 Taurine catabolism dioxygenase TauD, TfdA family K06912 - - 0.000000000000000000000000000000000000000000000000000000000000000000009941 244.0
DYD3_k127_3499198_2 Tryptophan halogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000005752 240.0
DYD3_k127_3503779_0 Belongs to the CinA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006724 589.0
DYD3_k127_3510231_0 short-chain dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001855 289.0
DYD3_k127_3510231_1 - - - - 0.00000000000000000000000000000000000000000000000003287 185.0
DYD3_k127_3514774_0 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 2.823e-248 795.0
DYD3_k127_3514774_1 Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC) - - - 2.715e-206 651.0
DYD3_k127_3514774_10 Antibiotic biosynthesis monooxygenase - - - 0.000000002396 70.0
DYD3_k127_3514774_2 Luciferase-like monooxygenase - - - 3.606e-202 634.0
DYD3_k127_3514774_3 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008203 439.0
DYD3_k127_3514774_4 Transport permease protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004285 413.0
DYD3_k127_3514774_5 PFAM secretion protein HlyD family protein K01993,K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001759 404.0
DYD3_k127_3514774_6 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004717 372.0
DYD3_k127_3514774_7 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000002528 264.0
DYD3_k127_3514774_8 Transmembrane secretion effector - - - 0.0000000000000000000000000000000000000000000000004078 195.0
DYD3_k127_3514774_9 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000001969 135.0
DYD3_k127_3519284_0 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain K01596,K01610 - 4.1.1.32,4.1.1.49 4.153e-261 817.0
DYD3_k127_3519284_1 Cell shape determining protein MreB Mrl K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004618 446.0
DYD3_k127_3519284_2 PFAM iron-containing alcohol dehydrogenase K00001,K11173,K13954 - 1.1.1.1,1.1.99.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004282 326.0
DYD3_k127_3519284_3 PAS domain - - - 0.000000000000000000000000000003089 124.0
DYD3_k127_3519284_4 PFAM peptidase - - - 0.00000000000000000000000000002246 129.0
DYD3_k127_3519284_5 Polymer-forming cytoskeletal - - - 0.0000000000000000000003506 101.0
DYD3_k127_3519284_6 Bacterial regulatory protein, Fis family K02481,K07714 GO:0003674,GO:0003700,GO:0004857,GO:0006355,GO:0008073,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0010967,GO:0019219,GO:0019222,GO:0030234,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0033238,GO:0042979,GO:0043086,GO:0044092,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0065009,GO:0080090,GO:0098772,GO:0140110,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 - 0.00000000000000000005329 96.0
DYD3_k127_3523359_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004581 530.0
DYD3_k127_3523359_1 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004231 471.0
DYD3_k127_3523359_2 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00263 - 1.4.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007311 456.0
DYD3_k127_3523359_3 Ribose/Galactose Isomerase K01808 - 5.3.1.6 0.00000000000000000000000000000000000000000000005131 176.0
DYD3_k127_3523359_4 - - - - 0.00000000000000000000000000000000002625 140.0
DYD3_k127_3523359_5 - - - - 0.000000000000000000000000009597 110.0
DYD3_k127_3523359_6 CAAX protease self-immunity K07052 - - 0.0000000000000005803 88.0
DYD3_k127_3523359_7 Proton-conducting membrane transporter - - - 0.0000000000000008629 85.0
DYD3_k127_3537460_0 Bacterial protein of unknown function (DUF839) K07093 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005244 408.0
DYD3_k127_3537460_1 Thioredoxin-like K02199,K03671 - - 0.0000000000000000000000000000000000000000000000006727 177.0
DYD3_k127_3537460_2 subunit of a heme lyase K02198,K02200 - - 0.00000000000000000000000003196 118.0
DYD3_k127_3537460_3 Transposase - - - 0.00000000000001745 81.0
DYD3_k127_3537460_4 SMART Tetratricopeptide - - - 0.00000335 59.0
DYD3_k127_3537460_5 - - - - 0.0005089 52.0
DYD3_k127_3537498_0 Branched-chain amino acid ATP-binding cassette transporter K01995,K01998 - - 0.0000000000000000000000000000000000000000000000000000000009682 209.0
DYD3_k127_3537498_1 Cysteine-rich motif following a subset of SET domains K07117 - - 0.00000000000000000000000000000000000000001581 156.0
DYD3_k127_3537498_2 Domain of unknown function (DUF1772) - - - 0.00000000000000000000000002473 115.0
DYD3_k127_3537498_3 Receptor family ligand binding region K01999 - - 0.000000000000000000004889 97.0
DYD3_k127_3537498_5 Membrane transporters of cations and cationic drugs K03297 - - 0.0006033 49.0
DYD3_k127_3545199_0 transferase activity, transferring glycosyl groups K20742 - 3.4.14.13 0.0000000000000000000000000000000000000000000000000000001816 199.0
DYD3_k127_3545199_1 Belongs to the Dps family K04047 - - 0.000000000000000000000000000000000000000000000000000001254 197.0
DYD3_k127_3545199_2 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K03366 - 1.1.1.304,1.1.1.76 0.0000000000000000000000000000000000000000000000000265 194.0
DYD3_k127_3545199_3 PFAM FKBP-type peptidyl-prolyl cis-trans isomerase K01802,K03772 - 5.2.1.8 0.0000000000000000000000000000000000000000000000002417 182.0
DYD3_k127_3545199_4 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.00000000000000000001199 91.0
DYD3_k127_3558026_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 GO:0000166,GO:0000287,GO:0000502,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009266,GO:0009376,GO:0009408,GO:0009628,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0019904,GO:0022607,GO:0030554,GO:0031597,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034214,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043335,GO:0043933,GO:0044085,GO:0044238,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051259,GO:0065003,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1902494,GO:1904949,GO:1905368,GO:1905369 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005119 598.0
DYD3_k127_3558026_1 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168,K07479 GO:0003674,GO:0003824,GO:0003916,GO:0003917,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006265,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016853,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360 5.99.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 488.0
DYD3_k127_3558026_2 Phage integrase, N-terminal SAM-like domain K03733,K04763 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002881 268.0
DYD3_k127_3558026_3 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 GO:0000166,GO:0000287,GO:0000502,GO:0003674,GO:0003824,GO:0004175,GO:0004298,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009266,GO:0009376,GO:0009408,GO:0009628,GO:0009987,GO:0016043,GO:0016787,GO:0017076,GO:0019538,GO:0019904,GO:0022607,GO:0030163,GO:0030554,GO:0031597,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034214,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051259,GO:0051603,GO:0065003,GO:0070003,GO:0070011,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1904949,GO:1905368,GO:1905369 3.4.25.2 0.000000000000000000000000000000000000000000000000000000000000000000001751 240.0
DYD3_k127_3558026_4 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.000000000000005082 76.0
DYD3_k127_3560202_0 FtsX-like permease family K02004 - - 4.802e-199 658.0
DYD3_k127_3560202_1 Belongs to the thiolase family K00632 - 2.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003863 462.0
DYD3_k127_3560202_2 indolepyruvate ferredoxin oxidoreductase activity K04090 - 1.2.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000399 447.0
DYD3_k127_3560202_3 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005016 383.0
DYD3_k127_3560202_4 Belongs to the FPG family K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002009 291.0
DYD3_k127_3560202_5 lipoprotein transporter activity K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001847 277.0
DYD3_k127_3560202_6 lipolytic protein G-D-S-L family K10804 GO:0003674,GO:0003824,GO:0004620,GO:0004622,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016289,GO:0016290,GO:0016298,GO:0016787,GO:0016788,GO:0016790,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0042802,GO:0043170,GO:0044238,GO:0044464,GO:0047617,GO:0052689,GO:0071704,GO:0140096,GO:1901564 3.1.1.5 0.000000000000000000000000000000000000000000000000000007316 197.0
DYD3_k127_3560202_7 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000005368 209.0
DYD3_k127_3560202_8 Responsible for synthesis of pseudouridine from uracil K06177,K06180 - 5.4.99.23,5.4.99.28,5.4.99.29 0.00000000000000000000000000000000000000000000000008854 197.0
DYD3_k127_3583997_0 PFAM ABC transporter related K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005775 313.0
DYD3_k127_3583997_1 ABC transporter K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001697 303.0
DYD3_k127_3583997_2 PFAM Ornithine cyclodeaminase mu-crystallin K01750,K19244 - 1.4.1.1,4.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000001871 260.0
DYD3_k127_3583997_3 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000000003241 224.0
DYD3_k127_3583997_4 MaoC like domain - - - 0.000000000000000000000000000000000002478 142.0
DYD3_k127_3583997_5 branched-chain amino acid transport system, permease component K01998 - - 0.0000000000000000000000000004759 115.0
DYD3_k127_3583997_6 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.00000000000000000000000000837 114.0
DYD3_k127_3583997_7 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.000000001607 62.0
DYD3_k127_358687_0 Dienelactone hydrolase family K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005658 481.0
DYD3_k127_358687_1 efflux pump - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006239 461.0
DYD3_k127_358687_2 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003828 405.0
DYD3_k127_358687_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007596 261.0
DYD3_k127_358687_4 PFAM Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.0009359 48.0
DYD3_k127_358738_0 Aminotransferase class-V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002435 289.0
DYD3_k127_358738_1 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.000000000000000000000000000000000000000000000000000000000000008196 235.0
DYD3_k127_358738_2 Acyl-CoA dehydrogenase, middle domain - GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000003758 226.0
DYD3_k127_358738_3 Pyridoxamine 5'-phosphate oxidase K07006 - - 0.000000000000000000000002912 119.0
DYD3_k127_358738_4 TIGRFAM outer membrane autotransporter barrel domain K19231 - - 0.00000244 60.0
DYD3_k127_3593377_0 Sugar (and other) transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000404 430.0
DYD3_k127_3593377_1 Fatty acid hydroxylase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 344.0
DYD3_k127_3593377_2 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003366 324.0
DYD3_k127_3593377_3 - - - - 0.000000000000000000000000001532 119.0
DYD3_k127_3599975_0 proteins of the AP superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004225 432.0
DYD3_k127_3599975_1 YXWGXW repeat (2 copies) - - - 0.00000000000000001076 83.0
DYD3_k127_360895_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003877 461.0
DYD3_k127_360895_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005333 426.0
DYD3_k127_360895_2 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000003004 189.0
DYD3_k127_360895_3 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.0000000001231 67.0
DYD3_k127_3611410_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002998 479.0
DYD3_k127_3611410_1 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region K00336 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002841 348.0
DYD3_k127_3611410_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0016020,GO:0044424,GO:0044464,GO:0071944 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000002427 243.0
DYD3_k127_3611410_3 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.00000000000000000000000000000000000000001847 157.0
DYD3_k127_3672173_0 Cytochrome C assembly protein K02198,K04016 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0017003,GO:0017004,GO:0017006,GO:0018063,GO:0018193,GO:0018198,GO:0018378,GO:0019538,GO:0020037,GO:0022607,GO:0031224,GO:0031226,GO:0034622,GO:0036211,GO:0043170,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0046906,GO:0048037,GO:0065003,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007388 556.0
DYD3_k127_3677087_0 Actin K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 494.0
DYD3_k127_3677087_1 Penicillin-binding protein 2 K05515 GO:0000270,GO:0003674,GO:0003824,GO:0004180,GO:0004185,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006023,GO:0006024,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008360,GO:0008658,GO:0009002,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0016787,GO:0017171,GO:0019538,GO:0022603,GO:0022604,GO:0030203,GO:0031224,GO:0031226,GO:0031406,GO:0033218,GO:0033293,GO:0034645,GO:0036094,GO:0042221,GO:0042493,GO:0042546,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044425,GO:0044459,GO:0044464,GO:0045229,GO:0046677,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0065007,GO:0065008,GO:0070008,GO:0070011,GO:0070589,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071944,GO:0071972,GO:0097159,GO:0140096,GO:1901135,GO:1901137,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000008854 248.0
DYD3_k127_3677087_2 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.0000000000000000000000000000000000000000000000000001555 188.0
DYD3_k127_3677087_3 Involved in formation and maintenance of cell shape K03570 - - 0.00000000000000000000000000000000000000001853 163.0
DYD3_k127_3677087_4 rod shape-determining protein MreD K03571 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0008360,GO:0016020,GO:0016021,GO:0022603,GO:0022604,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071944 - 0.0000000000001857 81.0
DYD3_k127_3682139_0 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000997 374.0
DYD3_k127_3682139_1 Tetratricopeptide repeat K11935 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004598 337.0
DYD3_k127_3682139_2 Binding-protein-dependent transport system inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003913 312.0
DYD3_k127_3682139_3 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919,K16924 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.0000000000000000000000000000000000000000000000000000000000008436 221.0
DYD3_k127_3682139_4 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.000000001149 68.0
DYD3_k127_3685635_0 Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner K09810 - - 0.000000000000000000000000000000000000000000000000000001779 201.0
DYD3_k127_3685635_1 ABC-type transport system involved in lipoprotein release permease component K02004 - - 0.0000000000000000000000000000000000000001207 168.0
DYD3_k127_3685635_2 Tryptophan halogenase - - - 0.00000000000000000000000000000000000001067 153.0
DYD3_k127_3685635_3 PFAM glycosyl transferase family 39 - - - 0.000000000000000001168 94.0
DYD3_k127_3694674_0 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor K21417 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 483.0
DYD3_k127_3694674_1 Catalytic domain of components of various dehydrogenase complexes K00627 - 2.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001869 401.0
DYD3_k127_3699746_0 TRAP transporter, 4TM 12TM fusion protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002619 485.0
DYD3_k127_3699746_1 'PFAM Taurine catabolism dioxygenase TauD, TfdA family' - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001147 266.0
DYD3_k127_3699746_2 protein conserved in cyanobacteria - - - 0.00000000000000000000000000000000000000000000002255 179.0
DYD3_k127_3699746_3 COGs COG3328 Transposase and inactivated derivatives - - - 0.0000000000000000000000000000000000000004326 154.0
DYD3_k127_3699746_4 Endoribonuclease L-PSP - - - 0.000000000000000000000002026 119.0
DYD3_k127_3699746_5 translation initiation inhibitor, yjgF family - - - 0.00000000000000000000004573 115.0
DYD3_k127_3699746_6 cytidylyl-transferase K00983,K21749 - 2.7.7.43,2.7.7.92 0.000000000000003607 85.0
DYD3_k127_3719546_0 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009985 531.0
DYD3_k127_3719546_1 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003204 427.0
DYD3_k127_3719546_2 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 402.0
DYD3_k127_3719546_3 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 330.0
DYD3_k127_3719546_4 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004276 305.0
DYD3_k127_3719546_5 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001567 274.0
DYD3_k127_3719546_6 Ketopantoate reductase PanE/ApbA C terminal K00077 - 1.1.1.169 0.000000000000002233 80.0
DYD3_k127_3719546_7 Luciferase-like monooxygenase - - - 0.00002618 48.0
DYD3_k127_3726824_0 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002848 317.0
DYD3_k127_3726824_1 PFAM monooxygenase FAD-binding - - - 0.0000000000000000000000000000000004858 134.0
DYD3_k127_3726824_2 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.000000000000000000000000000007136 123.0
DYD3_k127_3734019_0 Ribosomal protein S2 K02967 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 346.0
DYD3_k127_3734019_1 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.000000000000000000000000000000000000000000000000000000002098 209.0
DYD3_k127_3742054_0 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity K00303 - 1.5.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004791 333.0
DYD3_k127_3742054_1 Transglycosylase K05365,K05366 - 2.4.1.129,3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000073 317.0
DYD3_k127_3743236_0 N-terminal half of MaoC dehydratase K09709 - 4.2.1.153 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 308.0
DYD3_k127_3743236_1 Amidase K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000002947 264.0
DYD3_k127_3743236_2 putrescine biosynthetic process from ornithine K01586,K01611,K18408 - 3.6.4.13,4.1.1.20,4.1.1.50 0.000003043 49.0
DYD3_k127_3753885_0 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004074 300.0
DYD3_k127_3753885_1 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002834 310.0
DYD3_k127_3753885_2 Belongs to the Nudix hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000001856 235.0
DYD3_k127_3753885_3 2Fe-2S -binding domain protein K03518,K07302,K19819 - 1.2.5.3,1.3.99.16,1.5.99.4 0.00000000000000000000000000000000000000000000004653 171.0
DYD3_k127_3753885_4 Bacterial transferase hexapeptide (six repeats) - - - 0.000000000000000000000000000000000000002478 163.0
DYD3_k127_3753885_5 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K06034 - 4.1.1.79 0.000000000000000000000000000004088 129.0
DYD3_k127_3753885_6 Bacterial PH domain - - - 0.00000000000000000000000000002877 122.0
DYD3_k127_3753885_7 phosphatase activity K07025,K20862,K20866 - 3.1.3.10,3.1.3.102,3.1.3.104 0.000000000000000000000006911 116.0
DYD3_k127_3753885_8 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K13039 - 4.1.1.79 0.0000000000000001606 92.0
DYD3_k127_3774203_0 Belongs to the IlvD Edd family K22396 - 4.2.1.82 4.66e-317 982.0
DYD3_k127_3774203_1 PFAM D-galactarate dehydratase Altronate hydrolase K01685 - 4.2.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001475 576.0
DYD3_k127_3774203_2 transferase K07749,K18702 - 2.8.3.16,2.8.3.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002615 440.0
DYD3_k127_3774203_3 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004108 287.0
DYD3_k127_3774203_4 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000001364 184.0
DYD3_k127_3774203_5 PhoQ Sensor - - - 0.00000000000000000000000000000000000000002244 158.0
DYD3_k127_3774203_6 ATP-dependent Clp protease adaptor protein ClpS - - - 0.00000000000001666 78.0
DYD3_k127_3776973_0 Cardiolipin synthetase K06131 - - 8.787e-196 615.0
DYD3_k127_3776973_1 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 293.0
DYD3_k127_3776973_2 OmpA family - - - 0.000000000000000000000000000000000000000000000000000000000000000007249 239.0
DYD3_k127_3776973_3 Transglycosylase associated protein - - - 0.000000000000000000000000001369 114.0
DYD3_k127_3791900_0 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.0000000000000000000000000000000000000000000000000000000000001555 226.0
DYD3_k127_3791900_1 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.0000000000000000000000000000000000000000000000000796 184.0
DYD3_k127_3791900_2 Glycoprotease family K01409,K14742 GO:0002949,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140096,GO:1901360,GO:1901564 2.3.1.234 0.00000000000000000000000000000000002992 152.0
DYD3_k127_3791900_3 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.0000000000000000000000000000001162 128.0
DYD3_k127_3791900_4 transporter - - - 0.00000000000000000000000000001964 129.0
DYD3_k127_3804584_0 COG0488 ATPase components of ABC transporters with duplicated ATPase domains - - - 1.829e-240 750.0
DYD3_k127_3804584_1 KR domain K00065 - 1.1.1.127 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002642 350.0
DYD3_k127_3804584_10 Tryptophan halogenase - - - 0.000000000000000000000000000000000000000000068 184.0
DYD3_k127_3804584_11 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000143 151.0
DYD3_k127_3804584_12 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000007726 129.0
DYD3_k127_3804584_13 lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.00000000000000000000000000007879 130.0
DYD3_k127_3804584_14 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000003885 112.0
DYD3_k127_3804584_15 - - - - 0.000000000000000000001622 110.0
DYD3_k127_3804584_16 acyl carrier protein K02078 - - 0.000002287 57.0
DYD3_k127_3804584_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002738 329.0
DYD3_k127_3804584_3 FAD dependent oxidoreductase K00303 - 1.5.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005384 317.0
DYD3_k127_3804584_4 3'-5' exonuclease K03684 - 3.1.13.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001079 286.0
DYD3_k127_3804584_5 Belongs to the beta-ketoacyl-ACP synthases family K05551,K09458 - 2.3.1.179,2.3.1.235,2.3.1.260 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003804 284.0
DYD3_k127_3804584_6 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000009957 266.0
DYD3_k127_3804584_7 Pyridoxamine 5'-phosphate oxidase K07006 - - 0.000000000000000000000000000000000000000000000000000000000000000002646 235.0
DYD3_k127_3804584_8 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000002559 227.0
DYD3_k127_3804584_9 Histidine kinase-like ATPases - - - 0.0000000000000000000000000000000000000000000000001288 203.0
DYD3_k127_3824256_0 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002104 480.0
DYD3_k127_383623_0 Citrate synthase, C-terminal domain K01647 - 2.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 338.0
DYD3_k127_383623_1 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000006167 208.0
DYD3_k127_383623_2 protein involved in outer membrane biogenesis K07289 - - 0.0000001669 63.0
DYD3_k127_3836795_0 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000001877 250.0
DYD3_k127_3836795_1 Belongs to the UPF0282 family K07022 - - 0.000000000000000000000000000000000000000000000000001737 203.0
DYD3_k127_3847495_0 PFAM acetyl-CoA hydrolase transferase K01067 - 3.1.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004232 310.0
DYD3_k127_3847495_1 Putative heavy-metal-binding - - - 0.0000000000000000000000000000000000002209 151.0
DYD3_k127_3847495_2 oxidation-reduction process - - - 0.000000000000000000000000000000002706 133.0
DYD3_k127_3847495_3 Inosine-uridine preferring nucleoside hydrolase K01239,K01250 - 3.2.2.1 0.0000000000002225 74.0
DYD3_k127_3847495_4 Contains selenocysteine K07401 - - 0.000001612 51.0
DYD3_k127_3868989_0 COG3653 N-acyl-D-aspartate D-glutamate deacylase - - - 1.364e-226 715.0
DYD3_k127_3868989_1 PFAM short-chain dehydrogenase reductase SDR K00023,K00059 - 1.1.1.100,1.1.1.36 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003498 350.0
DYD3_k127_3868989_2 Luciferase-like monooxygenase K15854 - 1.14.14.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003878 282.0
DYD3_k127_3868989_3 Low molecular weight phosphatase family K01104,K20201 - 3.1.3.48,3.9.1.2 0.00000000000001031 87.0
DYD3_k127_3868989_4 - - - - 0.0000003846 60.0
DYD3_k127_3881264_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 474.0
DYD3_k127_3881264_1 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002889 346.0
DYD3_k127_3881264_2 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 0.000000000000000000000000000000000000000000000000000000000000000001721 249.0
DYD3_k127_3900372_0 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002565 266.0
DYD3_k127_3900372_1 DNA ligase (ATP) activity K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000166 162.0
DYD3_k127_3925713_0 P-aminobenzoate N-oxygenase AurF - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002152 488.0
DYD3_k127_3925713_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005656 337.0
DYD3_k127_3925713_2 Adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000002008 241.0
DYD3_k127_3925713_3 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000000000003198 217.0
DYD3_k127_3925713_4 MlaC protein K07323 - - 0.00000000000000000000000000000000000001274 160.0
DYD3_k127_3925713_5 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate K07106 - 4.2.1.126 0.0000000000004777 81.0
DYD3_k127_3928269_0 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003721 426.0
DYD3_k127_3928269_1 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005083 358.0
DYD3_k127_3928269_10 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.0000000000000000000000000000000000000001195 164.0
DYD3_k127_3928269_11 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000007654 153.0
DYD3_k127_3928269_12 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.000000000000000000000000000000113 128.0
DYD3_k127_3928269_13 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0008150,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000003172 128.0
DYD3_k127_3928269_14 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.000000000000000000000000001134 122.0
DYD3_k127_3928269_15 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.000000000000000000000002892 107.0
DYD3_k127_3928269_16 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.000000000000000000000006653 108.0
DYD3_k127_3928269_17 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.0000000000000000000002003 99.0
DYD3_k127_3928269_18 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000467 74.0
DYD3_k127_3928269_19 Ribosomal L29 protein K02904 - - 0.000000000001005 69.0
DYD3_k127_3928269_2 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008859 262.0
DYD3_k127_3928269_20 Ribosomal protein L30p/L7e K02907 - - 0.00000000002635 76.0
DYD3_k127_3928269_3 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002556 265.0
DYD3_k127_3928269_4 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004035 251.0
DYD3_k127_3928269_5 Forms part of the polypeptide exit tunnel K02926 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003416 253.0
DYD3_k127_3928269_6 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002771 248.0
DYD3_k127_3928269_7 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.000000000000000000000000000000000000000000000000000000000001048 211.0
DYD3_k127_3928269_8 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.00000000000000000000000000000000000000000000000000000000000887 209.0
DYD3_k127_3928269_9 Involved in the binding of tRNA to the ribosomes K02946 - - 0.0000000000000000000000000000000000000000000007055 167.0
DYD3_k127_3946876_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.0 1186.0
DYD3_k127_3946876_1 Belongs to the IlvD Edd family - - - 2.696e-226 716.0
DYD3_k127_3946876_2 NMT1-like family K07080 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018 508.0
DYD3_k127_3946876_4 regulatory protein GntR HTH - - - 0.000000000000007149 81.0
DYD3_k127_394708_0 DeoC/LacD family aldolase K11645 - 4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008563 473.0
DYD3_k127_394708_1 COG0477 Permeases of the major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002892 364.0
DYD3_k127_394708_2 Belongs to the FBPase class 1 family K03841 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005984,GO:0005985,GO:0005986,GO:0005996,GO:0006000,GO:0006002,GO:0006006,GO:0006094,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009311,GO:0009312,GO:0009987,GO:0016043,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0019318,GO:0019319,GO:0019637,GO:0022607,GO:0030388,GO:0034637,GO:0042132,GO:0042578,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046351,GO:0046364,GO:0050308,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:1901135,GO:1901576 3.1.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007649 336.0
DYD3_k127_3949312_0 Aconitase C-terminal domain K01681 - 4.2.1.3 3.574e-252 788.0
DYD3_k127_3949312_1 2Fe-2S iron-sulfur cluster binding domain - - - 0.0000000000000000000000000000000000000000000000000001036 199.0
DYD3_k127_3949312_2 Histidine triad (Hit) protein K02503 - - 0.000000000000000000000000000000000000000000000002192 179.0
DYD3_k127_3952966_0 D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase K01621 - 4.1.2.22,4.1.2.9 0.0 1332.0
DYD3_k127_3952966_1 haloacid dehalogenase-like hydrolase K01533 - 3.6.3.4 1.124e-265 861.0
DYD3_k127_3952966_10 Short C-terminal domain - - - 0.000000001434 67.0
DYD3_k127_3952966_2 Molecular chaperone. Has ATPase activity K04079 GO:0000302,GO:0000303,GO:0000305,GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0009987,GO:0010035,GO:0016020,GO:0030312,GO:0033554,GO:0034599,GO:0034614,GO:0042221,GO:0044464,GO:0050896,GO:0051716,GO:0070887,GO:0071450,GO:0071451,GO:0071944,GO:1901700,GO:1901701 - 7.837e-210 670.0
DYD3_k127_3952966_3 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K00850,K00895,K21071 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005975,GO:0006002,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008443,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019200,GO:0019637,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044262,GO:0046835,GO:0046872,GO:0047334,GO:0071704,GO:1901135 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003029 524.0
DYD3_k127_3952966_4 PFAM monooxygenase FAD-binding K20940 - 1.14.13.218 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005536 529.0
DYD3_k127_3952966_5 Putative zinc-binding metallo-peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006948 409.0
DYD3_k127_3952966_6 Transglycosylase SLT domain K08307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001072 287.0
DYD3_k127_3952966_7 ATP-grasp domain K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000001565 284.0
DYD3_k127_3952966_8 AhpC/TSA antioxidant enzyme - - - 0.000000000000000000000000000004136 123.0
DYD3_k127_3960084_0 Transglycosylase - - - 3.239e-306 971.0
DYD3_k127_3960084_1 Short-chain dehydrogenase reductase sdr - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008615 273.0
DYD3_k127_3960084_2 3-beta hydroxysteroid dehydrogenase/isomerase family K18981 - 1.1.1.203 0.0000000000000000000000000000000000000000000000002045 186.0
DYD3_k127_3960084_3 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000004797 127.0
DYD3_k127_3960084_4 Patatin-like phospholipase K07001 - - 0.0000000000000000000000034 114.0
DYD3_k127_3960084_5 exodeoxyribonuclease III K01142 - 3.1.11.2 0.0000000000000000001167 98.0
DYD3_k127_3960084_6 NUDIX domain - - - 0.000000000000000001041 94.0
DYD3_k127_3960084_7 Carboxymuconolactone decarboxylase family - - - 0.0000000000006877 82.0
DYD3_k127_3960084_8 OmpA family - - - 0.000000000075 73.0
DYD3_k127_3962822_0 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 - 1.2.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005685 459.0
DYD3_k127_3962822_1 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 404.0
DYD3_k127_3962822_10 Bacterial extracellular solute-binding protein K02055 - - 0.000000000000006414 85.0
DYD3_k127_3962822_2 PUA domain K00931 GO:0003674,GO:0003824,GO:0004349,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0018130,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000138 376.0
DYD3_k127_3962822_3 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.0000000000000000000000000000000000000000002273 166.0
DYD3_k127_3962822_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000008814 149.0
DYD3_k127_3962822_5 Bacterial transcriptional repressor C-terminal K16137 - - 0.000000000000000000000000000000000003556 146.0
DYD3_k127_3962822_6 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000003193 121.0
DYD3_k127_3962822_7 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K00969,K09710 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006417,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0017148,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0034248,GO:0034249,GO:0043021,GO:0043023,GO:0044087,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:0090069,GO:0090071,GO:2000112,GO:2000113 2.7.7.18 0.000000000000000000000000004731 122.0
DYD3_k127_3962822_8 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.00000000000000000000006694 104.0
DYD3_k127_3962822_9 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.000000000000000000007822 96.0
DYD3_k127_3968778_0 metal-dependent hydrolase of the TIM-barrel fold K07045 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008793 308.0
DYD3_k127_3968778_1 PFAM L-carnitine dehydratase bile acid-inducible protein F K07749,K18313 - 2.8.3.16,2.8.3.20 0.00000000000000000000000000000000000000000000000000000000000000000005208 259.0
DYD3_k127_3968778_2 CoA-transferase family III K07749 - 2.8.3.16 0.00000000000000000000000000000000000000000000000000000000000000004588 250.0
DYD3_k127_3968778_3 X-Pro dipeptidyl-peptidase domain protein K06978 - - 0.000000000000000000000000000000000000000000000000000003365 198.0
DYD3_k127_3968778_4 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000000000000000000000000000000000000003855 191.0
DYD3_k127_3968778_5 Nucleotidyltransferase domain K07075 - - 0.0000000000000000005184 88.0
DYD3_k127_3968778_6 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.0000003661 61.0
DYD3_k127_3968778_7 - - - - 0.00001077 47.0
DYD3_k127_3968778_8 Protein of unknown function DUF86 - - - 0.00009613 48.0
DYD3_k127_3974903_0 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002435 545.0
DYD3_k127_3974903_1 nitric oxide dioxygenase activity K00523 - 1.17.1.1 0.0000000000000000000000000002959 127.0
DYD3_k127_3974903_2 Glycosyl transferases group 1 - - - 0.000000000000000000000000002314 120.0
DYD3_k127_3974903_3 Luciferase-like monooxygenase - - - 0.0000000000000000000003163 100.0
DYD3_k127_3974903_4 Lactoylglutathione lyase and related lyases - - - 0.000000000000000000004092 100.0
DYD3_k127_3977066_0 Periplasmic binding protein domain K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006109 592.0
DYD3_k127_3977066_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003055 522.0
DYD3_k127_3977066_10 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.00000000000000000000002858 106.0
DYD3_k127_3977066_2 Dihydrodipicolinate synthetase family K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008748 317.0
DYD3_k127_3977066_3 Ribulose-phosphate 3 epimerase family K01783 GO:0003674,GO:0003824,GO:0004750,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009052,GO:0009056,GO:0009117,GO:0009987,GO:0016052,GO:0016853,GO:0016854,GO:0016857,GO:0019321,GO:0019323,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046483,GO:0046496,GO:0046872,GO:0051156,GO:0051186,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564,GO:1901575 5.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000911 277.0
DYD3_k127_3977066_4 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000000003485 276.0
DYD3_k127_3977066_5 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000001186 214.0
DYD3_k127_3977066_6 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.00000000000000000000000000000000000000006275 156.0
DYD3_k127_3977066_7 Isochorismatase family - - - 0.000000000000000000000000000305 122.0
DYD3_k127_3977066_8 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.0000000000000000000000004602 106.0
DYD3_k127_3977066_9 nucleic acid phosphodiester bond hydrolysis K07460 - - 0.000000000000000000000001608 107.0
DYD3_k127_3991470_0 DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006786 383.0
DYD3_k127_3991470_1 cob(I)yrinic acid a,c-diamide adenosyltransferase activity K00798,K13821 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005525,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016043,GO:0016740,GO:0016765,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019003,GO:0019438,GO:0019538,GO:0022607,GO:0030091,GO:0030554,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0033013,GO:0033014,GO:0034641,GO:0035639,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0065003,GO:0070206,GO:0070207,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.2.1.88,1.5.5.2,2.5.1.17 0.000000000000000000000000000000000000000000000000000000001184 207.0
DYD3_k127_3991470_2 - - - - 0.0000000000000000000000000000000000000000000000001126 180.0
DYD3_k127_3991470_3 CoA binding domain K06929 - - 0.000000000000000000000000000000000000000000000000347 178.0
DYD3_k127_3991470_4 Antibiotic biosynthesis monooxygenase K11530 - 5.3.1.32 0.0000000000000000000000000000001029 126.0
DYD3_k127_3991470_5 Acetyltransferase (GNAT) domain - - - 0.00000000000000001032 90.0
DYD3_k127_3991470_6 YCII-related domain K09780 - - 0.00000000000005184 76.0
DYD3_k127_3993325_0 Nitronate monooxygenase K00459 - 1.13.12.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001564 289.0
DYD3_k127_3993325_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000002058 87.0
DYD3_k127_3993325_2 Domain of unknown function (DUF1932) - - - 0.00000000000001401 76.0
DYD3_k127_399429_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.0 1114.0
DYD3_k127_399429_1 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016020,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0040007,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.17 3.034e-288 893.0
DYD3_k127_399429_10 - - - - 0.000000000001039 68.0
DYD3_k127_399429_11 Pyridoxamine 5'-phosphate oxidase K07006 - - 0.000000006268 62.0
DYD3_k127_399429_12 Glutaredoxin K03676,K06191 - - 0.0000001996 56.0
DYD3_k127_399429_2 Gamma-glutamyltranspeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 376.0
DYD3_k127_399429_3 Haloacid dehalogenase-like hydrolase K01560 - 3.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000002403 241.0
DYD3_k127_399429_4 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000002099 232.0
DYD3_k127_399429_5 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000003667 240.0
DYD3_k127_399429_6 Belongs to the peptidase S11 family K01286 - 3.4.16.4 0.000000000000000000000000000000000000000000001988 177.0
DYD3_k127_399429_7 ChrR Cupin-like domain - - - 0.00000000000000000000000000000001714 130.0
DYD3_k127_399429_8 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.0000000000000000003058 90.0
DYD3_k127_399429_9 Amidase K01426 - 3.5.1.4 0.00000000000000002959 84.0
DYD3_k127_400863_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002116 388.0
DYD3_k127_400863_1 smart pdz dhr glgf K04771,K04772 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004837 347.0
DYD3_k127_402121_0 PFAM Phosphomethylpyrimidine kinase type-1 K00941,K14153 - 2.5.1.3,2.7.1.49,2.7.4.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003021 287.0
DYD3_k127_402121_1 DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K03732 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000001767 254.0
DYD3_k127_402121_2 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000001372 256.0
DYD3_k127_402121_3 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009977,GO:0015031,GO:0015291,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0022804,GO:0022857,GO:0022884,GO:0032991,GO:0033036,GO:0033281,GO:0034613,GO:0042886,GO:0042887,GO:0043953,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098796,GO:0098797,GO:1904680 - 0.0000000000000000000000000000000000000000000000000000000000000004015 240.0
DYD3_k127_402121_4 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000595 50.0
DYD3_k127_4047511_0 alanine symporter K03310 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004328 601.0
DYD3_k127_4047511_1 oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor K00311 GO:0003674,GO:0003824,GO:0004174,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016645,GO:0016649,GO:0016722,GO:0017133,GO:0019866,GO:0022900,GO:0022904,GO:0031090,GO:0031224,GO:0031300,GO:0031301,GO:0031304,GO:0031305,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0032592,GO:0032991,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043783,GO:0044237,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045251,GO:0045333,GO:0048037,GO:0048038,GO:0048039,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0070013,GO:0098573,GO:0098798,GO:1902494,GO:1990204 1.5.5.1 0.00000000000000000000000000008377 120.0
DYD3_k127_4054019_0 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 3.254e-196 619.0
DYD3_k127_4054019_1 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008959 469.0
DYD3_k127_4054019_2 amine oxidase K00276 - 1.4.3.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001234 272.0
DYD3_k127_4054019_3 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000000000000000000000000001972 250.0
DYD3_k127_4054019_4 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000006665 153.0
DYD3_k127_4054019_5 protein conserved in bacteria - - - 0.00000000000000000000000000000000002236 146.0
DYD3_k127_4054019_6 YCII-related domain - - - 0.00000000000000000000004608 114.0
DYD3_k127_4054019_7 COG0346 Lactoylglutathione lyase and related lyases - - - 0.000005384 58.0
DYD3_k127_4075195_0 amidohydrolase K01845 - 5.4.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005555 384.0
DYD3_k127_4075195_1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 367.0
DYD3_k127_4075195_2 carboxylic ester hydrolase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008467 347.0
DYD3_k127_4075195_3 3-demethylubiquinone-9 3-methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002266 269.0
DYD3_k127_4075195_4 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000113 245.0
DYD3_k127_409106_0 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003276 562.0
DYD3_k127_409106_1 Belongs to the glycosyl hydrolase 57 family K22451 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.4.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003413 486.0
DYD3_k127_409106_2 Uncharacterised protein family (UPF0182) K09118 GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002623 396.0
DYD3_k127_409106_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003685 360.0
DYD3_k127_409106_4 P-loop ATPase protein family K06958 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0034641,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005812 315.0
DYD3_k127_409106_5 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 - - 0.0000417 51.0
DYD3_k127_4096829_0 amine dehydrogenase activity K03418 - 3.5.1.56 4.176e-233 739.0
DYD3_k127_4096829_1 Peptidase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003614 501.0
DYD3_k127_4096829_2 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000002006 117.0
DYD3_k127_410765_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004093 530.0
DYD3_k127_410765_1 Metallopeptidase family M24 K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002828 330.0
DYD3_k127_410765_2 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000000000000000000000000000000000000004554 190.0
DYD3_k127_410765_3 Binds to the 23S rRNA K02876 - - 0.0000000000000000000000000000000000000000000002747 171.0
DYD3_k127_410765_4 Inositol monophosphatase family K01092 - 3.1.3.25 0.0000000000000000000000000000000000001048 144.0
DYD3_k127_410765_5 GTP binding K03595 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006996,GO:0008150,GO:0009987,GO:0016043,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043021,GO:0043024,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0065003,GO:0070181,GO:0070925,GO:0071826,GO:0071840,GO:0097159,GO:1901363 - 0.00000000000000000000000005628 119.0
DYD3_k127_4108907_0 AMP-binding enzyme C-terminal domain K00666 - - 3.836e-269 839.0
DYD3_k127_4108907_1 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000003872 227.0
DYD3_k127_4108907_2 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000008872 166.0
DYD3_k127_4108907_3 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000004304 105.0
DYD3_k127_4108907_4 Carboxyl transferase domain - - - 0.0000002704 56.0
DYD3_k127_4110047_0 PFAM copper amine oxidase K00276 - 1.4.3.21 1.683e-208 656.0
DYD3_k127_4110047_1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K01576,K01652 - 2.2.1.6,4.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000001578 232.0
DYD3_k127_4120916_0 Proton-conducting membrane transporter K12137,K15828 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000153 595.0
DYD3_k127_4120916_1 NADH dehydrogenase (ubiquinone) activity K14089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005228 542.0
DYD3_k127_4120916_10 LemA family K03744 - - 0.000000000000000000000000000000000000000000000000000000000002061 222.0
DYD3_k127_4120916_11 Binding-protein-dependent transport system inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000006069 197.0
DYD3_k127_4120916_12 Beta-propeller domains of methanol dehydrogenase type K06872 - - 0.0000000000000000000000000000000000000000000000000002158 195.0
DYD3_k127_4120916_13 Hydrogenase 4 membrane K12140 GO:0008150,GO:0040007 - 0.000000000000000000000000000000000000000039 159.0
DYD3_k127_4120916_14 Staphylococcal nuclease homologue K01174 - 3.1.31.1 0.0000000000000000000000000000000000000002462 156.0
DYD3_k127_4120916_15 ArsR family transcriptional regulator - - - 0.00000000000000000000000000000005323 128.0
DYD3_k127_4120916_16 TPM domain - - - 0.0000000000000000000000000000001881 138.0
DYD3_k127_4120916_17 peptidyl-tyrosine sulfation - - - 0.0000000000000000217 89.0
DYD3_k127_4120916_2 Proton-conducting membrane transporter K12141 GO:0005575,GO:0005623,GO:0005886,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0016020,GO:0016021,GO:0031224,GO:0033554,GO:0044425,GO:0044464,GO:0050896,GO:0051716,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007631 436.0
DYD3_k127_4120916_3 Isocitrate/isopropylmalate dehydrogenase K00030 - 1.1.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002632 370.0
DYD3_k127_4120916_4 SAICAR synthetase K01923,K01945 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6,6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001457 355.0
DYD3_k127_4120916_5 NADH dehydrogenase K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015 341.0
DYD3_k127_4120916_6 N-terminal TM domain of oligopeptide transport permease C K02034,K15582 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004672 309.0
DYD3_k127_4120916_7 Putative serine dehydratase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001833 308.0
DYD3_k127_4120916_8 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004223 272.0
DYD3_k127_4120916_9 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.000000000000000000000000000000000000000000000000000000000000005583 223.0
DYD3_k127_4126887_0 Glycoside-hydrolase family GH114 K21006 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003706 397.0
DYD3_k127_4126887_1 Glycoside-hydrolase family GH114 K21006 - - 0.00000000000000000000000000000008579 139.0
DYD3_k127_4126887_2 STAS domain - - - 0.000000000000001427 86.0
DYD3_k127_4126887_3 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K04757 - 2.7.11.1 0.0000000000002449 79.0
DYD3_k127_4138129_0 Galactose-1-phosphate uridyl transferase, C-terminal domain K00965 - 2.7.7.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003258 326.0
DYD3_k127_4138129_1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003207 291.0
DYD3_k127_4138129_2 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.00000000000000000000000000000000000000009258 162.0
DYD3_k127_4138129_3 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.0000000000000000000000000000000000000155 157.0
DYD3_k127_4138129_4 Belongs to the ComB family K05979 GO:0003674,GO:0003824,GO:0016829,GO:0016830,GO:0016831,GO:0050545 3.1.3.71 0.00000000000000000000000000000102 128.0
DYD3_k127_4145611_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001852 597.0
DYD3_k127_4145611_1 Belongs to the short-chain dehydrogenases reductases (SDR) family K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000008872 179.0
DYD3_k127_4149030_0 Polysaccharide pyruvyl transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002482 455.0
DYD3_k127_4149030_1 Squalene/phytoene synthase K00801,K02291,K10208 GO:0003674,GO:0003824,GO:0004337,GO:0004659,GO:0006629,GO:0006720,GO:0006721,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016108,GO:0016109,GO:0016114,GO:0016116,GO:0016117,GO:0016740,GO:0016765,GO:0016767,GO:0042440,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046148,GO:0071704,GO:1901576 2.5.1.21,2.5.1.32,2.5.1.96,2.5.1.99 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 349.0
DYD3_k127_4149030_2 Domain of Unknown Function (DUF748) - - - 0.00000000000000000000000000000000000000000000000000000001481 207.0
DYD3_k127_4149030_3 epimerase, PhzC PhzF homolog - - - 0.00000000000000000001552 106.0
DYD3_k127_4149030_4 - - - - 0.000000000000711 72.0
DYD3_k127_4149030_5 FAD dependent oxidoreductase - - - 0.00000002525 55.0
DYD3_k127_4155831_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 9.724e-204 646.0
DYD3_k127_4161876_0 ABC 3 transport family K02075 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001177 266.0
DYD3_k127_4161876_1 Belongs to the bacterial solute-binding protein 9 family K09815 - - 0.000000000000000000000000000000000000000000000000000000000000000000009488 257.0
DYD3_k127_4161876_2 Belongs to the bacterial solute-binding protein 9 family K02077,K09815 - - 0.00000000000000000000000000000000000000000000000000000000002397 216.0
DYD3_k127_4161876_3 Tfp pilus assembly protein FimV - - - 0.00000000000000000000000000000000000009091 157.0
DYD3_k127_4165159_0 acyl-CoA dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009409 498.0
DYD3_k127_4165159_1 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000291 467.0
DYD3_k127_4165159_2 Acyl-CoA dehydrogenase, middle domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007405 404.0
DYD3_k127_4165159_3 membrane - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002407 310.0
DYD3_k127_4169727_0 PFAM nitrite and sulphite reductase 4Fe-4S K00392 - 1.8.7.1 9.385e-231 728.0
DYD3_k127_4169727_1 Histone deacetylase domain K04768 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002702 362.0
DYD3_k127_4169727_10 Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000002358 215.0
DYD3_k127_4169727_11 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.00000000000000000000000000000000000000000000005077 180.0
DYD3_k127_4169727_12 Tetrapyrrole (Corrin/Porphyrin) Methylases K02302,K02303,K13542 - 1.3.1.76,2.1.1.107,4.2.1.75,4.99.1.4 0.000000000000000000000000000000000000001574 155.0
DYD3_k127_4169727_13 Belongs to the ompA family K03640 - - 0.00000000000000000000000000000003875 135.0
DYD3_k127_4169727_14 Tim44 - - - 0.00000000000000009228 80.0
DYD3_k127_4169727_15 - - - - 0.0000001825 64.0
DYD3_k127_4169727_16 - K09794 - - 0.00006235 51.0
DYD3_k127_4169727_2 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02010,K02045,K02049,K02068,K02071,K06857,K10112,K11072 - 3.6.3.25,3.6.3.30,3.6.3.31,3.6.3.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006757 370.0
DYD3_k127_4169727_3 PBP superfamily domain K05772 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001797 349.0
DYD3_k127_4169727_4 Belongs to the ABC transporter superfamily K02017 - 3.6.3.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 327.0
DYD3_k127_4169727_5 Tetrapyrrole (Corrin/Porphyrin) Methylases K01719,K01749,K02303,K13542,K13543 GO:0003674,GO:0003824,GO:0004851,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008757,GO:0009058,GO:0009987,GO:0016740,GO:0016741,GO:0018130,GO:0019354,GO:0019438,GO:0032259,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046156,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.107,2.5.1.61,4.2.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 310.0
DYD3_k127_4169727_6 Binding-protein-dependent transport system inner membrane component K05773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001368 292.0
DYD3_k127_4169727_7 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003145 285.0
DYD3_k127_4169727_8 Molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003074 259.0
DYD3_k127_4169727_9 PFAM binding-protein-dependent transport systems inner membrane component K02018 - - 0.0000000000000000000000000000000000000000000000000000000000000000000009326 243.0
DYD3_k127_4173506_0 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002141 362.0
DYD3_k127_4173506_1 Enoyl-(Acyl carrier protein) reductase K00059 GO:0000166,GO:0003674,GO:0003824,GO:0004312,GO:0004316,GO:0005488,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0030497,GO:0032787,GO:0036094,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0072330,GO:0097159,GO:1901265,GO:1901363,GO:1901576 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001452 280.0
DYD3_k127_4173506_2 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000005064 250.0
DYD3_k127_4173506_3 YCII-related domain - - - 0.0000000000000000000000000000000000000000000000000000005183 194.0
DYD3_k127_4173506_4 Belongs to the UPF0312 family - - - 0.000000000000000000000000000000000000001676 153.0
DYD3_k127_4173506_5 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000001795 92.0
DYD3_k127_4173506_6 Acetyltransferase (GNAT) domain - - - 0.00000000000000007112 93.0
DYD3_k127_4173506_7 belongs to the sigma-70 factor family, ECF subfamily K03088 - - 0.00000000000002294 75.0
DYD3_k127_4187395_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 445.0
DYD3_k127_4187395_1 Polysaccharide biosynthesis protein - - - 0.0000000000000000002814 93.0
DYD3_k127_4191639_0 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 590.0
DYD3_k127_4191639_1 PFAM cell divisionFtsK SpoIIIE K03466 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002249 543.0
DYD3_k127_4191639_10 Phosphatidylglycerophosphatase A K01095 - 3.1.3.27 0.00000000000000000000001004 109.0
DYD3_k127_4191639_11 PFAM Copper resistance protein CopC K07156 - - 0.000000000000000000009533 97.0
DYD3_k127_4191639_12 - - - - 0.00000000000006926 82.0
DYD3_k127_4191639_2 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001829 485.0
DYD3_k127_4191639_3 PFAM type II secretion system protein E K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006898 423.0
DYD3_k127_4191639_4 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 401.0
DYD3_k127_4191639_5 Belongs to the CinA family K03742,K03743 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 3.5.1.42 0.0000000000000000000000000000000000000000000000000000000000001876 228.0
DYD3_k127_4191639_6 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 0.000000000000000000000000000000000000000000000000000000001433 209.0
DYD3_k127_4191639_7 Belongs to the UPF0234 family K09767 - - 0.0000000000000000000000000000000000000000000000000003812 191.0
DYD3_k127_4191639_8 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008104,GO:0008150,GO:0009966,GO:0010646,GO:0010738,GO:0023051,GO:0033036,GO:0034237,GO:0044424,GO:0044444,GO:0044464,GO:0048583,GO:0050789,GO:0050794,GO:0051018,GO:0051179,GO:0065007,GO:1902531 3.1.4.58 0.00000000000000000000000000000001392 134.0
DYD3_k127_4191639_9 Outer membrane lipoprotein carrier protein LolA K03634 - - 0.00000000000000000000000008522 116.0
DYD3_k127_4204243_0 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K00666 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004176 441.0
DYD3_k127_4204243_1 HD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009301 304.0
DYD3_k127_4204243_2 GGDEF domain K07212,K07216 - - 0.0000000000000000000000000000000000003991 151.0
DYD3_k127_4206964_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 497.0
DYD3_k127_4206964_1 Aminotransferase class-V - GO:0001505,GO:0003674,GO:0003824,GO:0004760,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0006082,GO:0006520,GO:0006544,GO:0006545,GO:0006807,GO:0008150,GO:0008152,GO:0008453,GO:0008483,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0017144,GO:0019265,GO:0019752,GO:0042133,GO:0042136,GO:0042579,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004657 419.0
DYD3_k127_4206964_2 Histidyl-tRNA synthetase K00765,K01892,K02502 - 2.4.2.17,6.1.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 372.0
DYD3_k127_4206964_3 Histidine phosphatase superfamily (branch 1) - - - 0.000000000000000000000000000000000000000000001742 173.0
DYD3_k127_4206964_4 Nitroreductase family - - - 0.0000000000000000000000000000000000000000001198 165.0
DYD3_k127_4206964_5 - - - - 0.000000000000000000000000000000000000000004344 159.0
DYD3_k127_4206964_6 - - - - 0.000000000000000000000000000000001848 145.0
DYD3_k127_4206964_7 PFAM Phosphoglycerate mutase K02226,K22305 - 3.1.3.3,3.1.3.73 0.000000000000000000000000000000006005 146.0
DYD3_k127_4207413_0 PFAM NADH flavin oxidoreductase NADH oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005217 496.0
DYD3_k127_4207413_1 TIGRFAM acetolactate synthase, large subunit, biosynthetic type K01577,K01652,K03852 - 2.2.1.6,2.3.3.15,4.1.1.8 0.000000000000000000000000000000006928 135.0
DYD3_k127_4207413_2 Methyl-viologen-reducing hydrogenase, delta subunit - - - 0.00000000000000000000000000005341 123.0
DYD3_k127_4207413_3 2-Nitropropane dioxygenase - - - 0.00000000149 66.0
DYD3_k127_4207413_4 - - - - 0.000000222 62.0
DYD3_k127_4207413_5 Belongs to the TPP enzyme family K00156,K00158 - 1.2.3.3,1.2.5.1 0.000000285 60.0
DYD3_k127_4207413_6 Polymer-forming cytoskeletal - - - 0.00004516 48.0
DYD3_k127_4221481_0 Belongs to the GcvT family K00315,K19191 - 1.5.3.19,1.5.8.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000788 441.0
DYD3_k127_4221481_1 Memo-like protein K06990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003346 286.0
DYD3_k127_4221481_2 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.00000000000000000000000000000000000000000000000000000000000000000001423 246.0
DYD3_k127_4221481_3 Inositol monophosphatase family K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000004736 244.0
DYD3_k127_4221481_4 peptidase dimerisation domain protein K01439 - 3.5.1.18 0.0000000000000000000001036 101.0
DYD3_k127_4221481_5 Protein of unknown function (DUF2889) - - - 0.000000000000000003328 94.0
DYD3_k127_4221481_6 Protein conserved in bacteria K09986 - - 0.0000000000000005752 91.0
DYD3_k127_4221481_7 Pfam:DUF2029 - - - 0.00001118 58.0
DYD3_k127_4221481_8 DnaJ molecular chaperone homology domain - - - 0.000417 49.0
DYD3_k127_4225043_0 DNA topoisomerase II activity K03167 - 5.99.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003213 457.0
DYD3_k127_4225043_1 Belongs to the short-chain dehydrogenases reductases (SDR) family K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000002829 185.0
DYD3_k127_4225043_2 OsmC-like protein K06889,K07397 - - 0.000000000000000000000000000000000000000000000005698 175.0
DYD3_k127_4225043_3 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07323 - - 0.000000000000000000000004048 111.0
DYD3_k127_4239275_0 F420-0:Gamma-glutamyl ligase K12234 - 6.3.2.31,6.3.2.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003477 291.0
DYD3_k127_4239275_1 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.00000000000000000000000000000000000000000000001493 180.0
DYD3_k127_4239275_2 Guanylyl transferase CofC like K14941 - 2.7.7.68 0.00000000000000000000000000000000001009 149.0
DYD3_k127_4239275_3 TIGRFAM LPPG domain K11212 - 2.7.8.28 0.00000000000000000000000002763 113.0
DYD3_k127_4257299_0 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004635 503.0
DYD3_k127_4257299_1 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006045 513.0
DYD3_k127_4257299_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000001891 227.0
DYD3_k127_4257299_3 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) - - - 0.00000000000000000000000000000000000000000000000000008123 188.0
DYD3_k127_4257299_4 Belongs to the HpcH HpaI aldolase family K02510 - 4.1.2.52 0.000000000000000000000000000000006105 138.0
DYD3_k127_4257299_5 Halocarboxylic acid dehydrogenase DehI - - - 0.00000000000002416 83.0
DYD3_k127_4263896_0 Luciferase-like monooxygenase - - - 2.33e-213 669.0
DYD3_k127_4263896_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 4.556e-205 674.0
DYD3_k127_4263896_2 PFAM Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003694 439.0
DYD3_k127_4263896_3 Thioesterase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004856 289.0
DYD3_k127_4263896_4 Rieske [2Fe-2S] domain K19982 - - 0.0000000000000000000000000000000000000000000000000000000000001944 231.0
DYD3_k127_4263896_5 Amidohydrolase K03392,K22213 - 4.1.1.45,4.1.1.52 0.0000000000000000000000000000000000000000001786 183.0
DYD3_k127_4280746_0 COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3) K00382 - 1.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003008 494.0
DYD3_k127_4280746_1 Cytochrome C biogenesis protein transmembrane region K06196 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004377 257.0
DYD3_k127_4280746_2 COG0508 Pyruvate 2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) K00627 - 2.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000001724 239.0
DYD3_k127_4280746_3 Hydrolase of the alpha beta-hydrolase K07020 - - 0.00000000000000000000000000000000000000000009123 168.0
DYD3_k127_4280746_4 Putative sugar-binding N-terminal domain K22129 - 2.7.1.219,2.7.1.220 0.000000000000000000000000000007996 135.0
DYD3_k127_4280746_5 Redoxin family - - - 0.0000000000000000000000000001321 131.0
DYD3_k127_4283512_0 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006516 445.0
DYD3_k127_4283512_1 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 - 2.7.7.85 0.000000000000000000000000000000000000000000000000000000000000000000000000007295 261.0
DYD3_k127_4283512_2 Pterin binding enzyme K00796 - 2.5.1.15 0.0000000000000000000000000000000000000000000000000000000000006295 220.0
DYD3_k127_4283512_3 Cell Wall Hydrolase - - - 0.000000000000000000000000000000004636 131.0
DYD3_k127_4283512_4 4'-phosphopantetheinyl transferase superfamily K00997 - 2.7.8.7 0.0000000000000000000000000000554 130.0
DYD3_k127_4283512_5 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.00000000000000000000000000006074 130.0
DYD3_k127_4283512_6 YbbR-like protein - GO:0008150,GO:0031279,GO:0031281,GO:0043085,GO:0044093,GO:0045761,GO:0045762,GO:0050790,GO:0051339,GO:0051349,GO:0065007,GO:0065009 - 0.00000000005104 74.0
DYD3_k127_4284621_0 PFAM amidohydrolase K07045 - - 5.361e-206 645.0
DYD3_k127_4284621_1 PFAM Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002418 528.0
DYD3_k127_4284621_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006695 461.0
DYD3_k127_4284621_3 CoA-transferase family III K07749 - 2.8.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006887 352.0
DYD3_k127_4284621_4 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006766 328.0
DYD3_k127_4284621_5 alpha/beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000001334 253.0
DYD3_k127_4284621_6 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000004442 146.0
DYD3_k127_4284621_7 Sodium:sulfate symporter transmembrane region K03319 - - 0.0000000000000000000000005137 119.0
DYD3_k127_4284621_8 Protein of unknown function (DUF4242) - - - 0.0000000000000000000003434 105.0
DYD3_k127_4294791_0 PFAM Cys Met metabolism pyridoxal-phosphate-dependent K01739 - 2.5.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005406 479.0
DYD3_k127_4294791_1 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003006 326.0
DYD3_k127_4295894_0 PFAM Xanthine uracil vitamin C permease K06901 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005228 426.0
DYD3_k127_4295894_1 Amidohydrolase family K01464 - 3.5.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000262 425.0
DYD3_k127_4295894_10 C-C_Bond_Lyase of the TIM-Barrel fold K01644 - 4.1.3.34 0.00000000000000000000004436 109.0
DYD3_k127_4295894_11 DNA-sulfur modification-associated - - - 0.0000000000000000000944 102.0
DYD3_k127_4295894_2 Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA K07442 GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016426,GO:0016429,GO:0016740,GO:0016741,GO:0030488,GO:0031515,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234 2.1.1.219,2.1.1.220 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005265 311.0
DYD3_k127_4295894_3 ABC transporter K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008348 274.0
DYD3_k127_4295894_4 SurA N-terminal domain K03770 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000001413 274.0
DYD3_k127_4295894_5 Isochorismatase family K09020 - 3.5.1.110 0.00000000000000000000000000000000000000000000000000000001361 208.0
DYD3_k127_4295894_6 N-terminal half of MaoC dehydratase - - - 0.0000000000000000000000000000000000000000000000000000006307 209.0
DYD3_k127_4295894_7 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.000000000000000000000000000000000000000003245 175.0
DYD3_k127_4295894_8 Major Facilitator Superfamily K08223 - - 0.0000000000000000000000000000000000000005218 155.0
DYD3_k127_4295894_9 PFAM isochorismatase hydrolase - - - 0.00000000000000000000000000000000006899 149.0
DYD3_k127_4296977_0 Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002056 577.0
DYD3_k127_4296977_1 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001727 420.0
DYD3_k127_4296977_2 Class II Aldolase and Adducin N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006138 355.0
DYD3_k127_4296977_3 Protein of unknown function (DUF2587) - - - 0.00000000000000000000000000000001165 141.0
DYD3_k127_4296977_4 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 0.00000000000000008378 87.0
DYD3_k127_4296977_5 Rhodanese Homology Domain - - - 0.00000000000008145 72.0
DYD3_k127_4298073_0 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002014 448.0
DYD3_k127_4298073_1 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.000000000000000000000000000000000000000000000000000000006366 225.0
DYD3_k127_4298073_2 protein conserved in cyanobacteria - - - 0.00000000000000000000000000004357 121.0
DYD3_k127_4298073_3 - - - - 0.000000000000000000000000005266 117.0
DYD3_k127_4302046_0 Belongs to the amidase family K01426 - 3.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009093 463.0
DYD3_k127_4302046_1 Alpha beta hydrolase K07019 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006665 273.0
DYD3_k127_4302046_2 COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02034 - - 0.000000000000000000000000000000000000000000000000000000000002488 211.0
DYD3_k127_4302046_3 FR47-like protein - - - 0.000000000000000000000000000000000000000000000001415 184.0
DYD3_k127_4304469_0 Belongs to the transketolase family K00163 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 331.0
DYD3_k127_4304469_1 DJ-1/PfpI family - - - 0.00000000000000000000000000000000000000000000000000000000003438 224.0
DYD3_k127_4304469_2 Putative cyclase - - - 0.0000000000000000000000000000000000000000000000142 179.0
DYD3_k127_4304469_3 PFAM nuclease (SNase K01174 - 3.1.31.1 0.00000000000000000000000000000005338 135.0
DYD3_k127_4314916_0 Berberine and berberine like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002012 574.0
DYD3_k127_4314916_1 PFAM Sulfatase K01130 - 3.1.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002 567.0
DYD3_k127_4314916_2 Alanine dehydrogenase/PNT, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 392.0
DYD3_k127_4314916_3 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K00850,K00895,K21071 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005975,GO:0006002,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008443,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019200,GO:0019637,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044262,GO:0046835,GO:0046872,GO:0047334,GO:0071704,GO:1901135 2.7.1.11,2.7.1.90 0.000000000000000008422 89.0
DYD3_k127_4322290_0 zinc metalloprotease K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002529 273.0
DYD3_k127_4328377_0 GMC oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008794 557.0
DYD3_k127_4328377_1 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005234 315.0
DYD3_k127_4328377_2 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003258 292.0
DYD3_k127_4328377_3 - - - - 0.000000000000000000000002015 111.0
DYD3_k127_4328377_4 - - - - 0.0000000004976 68.0
DYD3_k127_4328383_0 Domain in cystathionine beta-synthase and other proteins. K14446 - 1.3.1.85 0.00000000000000000000000000000000000000000000000000000000000004573 216.0
DYD3_k127_4328383_1 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.000000000000000000000000000000000000000000000119 178.0
DYD3_k127_4328383_2 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.0000000000000000000000000000693 120.0
DYD3_k127_4328612_0 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.00000000000000000000000000000000000000000000000001747 192.0
DYD3_k127_4328612_1 DUF based on E. rectale Gene description (DUF3880) K06320 - - 0.0000000000001412 79.0
DYD3_k127_4331744_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.0 1032.0
DYD3_k127_4338600_0 benzoyl-CoA oxygenase - - - 1.58e-234 732.0
DYD3_k127_4338600_1 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001774 440.0
DYD3_k127_4338600_2 oxidation-reduction process - - - 0.000000000000000000000002178 109.0
DYD3_k127_4338600_3 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K04105,K04110 - 6.2.1.25,6.2.1.27 0.00000000003629 72.0
DYD3_k127_4343682_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 1.657e-227 713.0
DYD3_k127_4343682_1 Belongs to the citrate synthase family K01647 - 2.3.3.1 1.268e-201 639.0
DYD3_k127_4343682_2 PFAM Radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002089 370.0
DYD3_k127_4343682_3 IMP dehydrogenase activity K04767,K07182 - - 0.0000000000004818 70.0
DYD3_k127_4350093_0 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002879 398.0
DYD3_k127_4350093_1 carbamoyl transferase, NodU family K00612,K16035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005286 379.0
DYD3_k127_4350093_2 methyltransferase - - - 0.00000000000000000000000000000000001939 144.0
DYD3_k127_4356041_0 Catalyzes the S-adenosylmethionine monomethyl esterification of trans-aconitate K00598 - 2.1.1.144 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007709 307.0
DYD3_k127_4356041_1 BAAT / Acyl-CoA thioester hydrolase C terminal - - - 0.00000000000000000000000000000000000000008518 162.0
DYD3_k127_4356041_2 Asp-tRNAAsn Glu-tRNAGln amidotransferase A subunit K02433,K21801 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000372 149.0
DYD3_k127_4356041_3 Belongs to the mandelate racemase muconate lactonizing enzyme family K02549,K19802,K21617 GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009233,GO:0009234,GO:0009987,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 4.2.1.113,5.1.1.20,5.1.1.22 0.00001791 49.0
DYD3_k127_4369836_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001692 323.0
DYD3_k127_4369836_1 NUDIX domain K01515 - 3.6.1.13 0.000000000000000000000000000000002932 135.0
DYD3_k127_4369836_2 phosphatase activity - - - 0.0000000000000000000000000000001811 138.0
DYD3_k127_4369836_3 response regulator - - - 0.000000000000000000000000000002171 142.0
DYD3_k127_4369836_4 Methyltransferase type 11 - - - 0.0000000000000000000000001047 121.0
DYD3_k127_4377220_0 Nitrile hydratase beta subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000001581 242.0
DYD3_k127_4377220_1 Nitrile hydratase, alpha chain - - - 0.00000000000000000000000000000000000000000000000000000000000000000001521 237.0
DYD3_k127_4377220_2 ligase activity, forming nitrogen-metal bonds K02230 - 6.6.1.2 0.0000000000000000000000000000000000000000003156 175.0
DYD3_k127_4377220_3 Nitrile hydratase beta subunit - - - 0.000000000000637 81.0
DYD3_k127_4396536_0 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004005 293.0
DYD3_k127_4396536_1 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.0000000000000000000000000000000000000000000000000000001183 211.0
DYD3_k127_4398375_0 gluconolactonase K01053,K14274 - 3.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002367 356.0
DYD3_k127_4398375_1 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001497 357.0
DYD3_k127_4398375_2 Receptor family ligand binding region - - - 0.000000000000000000000000000000000000000001018 164.0
DYD3_k127_4398375_3 Tautomerase enzyme K01821 - 5.3.2.6 0.0000000000000004256 80.0
DYD3_k127_4402133_0 Amino acid permease - - - 1.432e-194 626.0
DYD3_k127_4402133_1 ABC transporter K06022,K06158,K10834 - 3.6.3.29,3.6.3.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003057 550.0
DYD3_k127_4402133_10 binds to the 23S rRNA K02939 - - 0.0000000000000000000000000000002347 136.0
DYD3_k127_4402133_11 SMART HNH nuclease K07451 - - 0.000000000000000000000000000007136 123.0
DYD3_k127_4402133_12 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000002182 98.0
DYD3_k127_4402133_13 Ribosomal protein S6 K02990 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0015935,GO:0016020,GO:0019843,GO:0022626,GO:0022627,GO:0030312,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0071944,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000005351 94.0
DYD3_k127_4402133_14 TIGRFAM competence protein ComEA helix-hairpin-helix repeat region K02237 - - 0.0000000000000381 76.0
DYD3_k127_4402133_15 Protein of unknown function (DUF971) - - - 0.00009212 50.0
DYD3_k127_4402133_2 Replicative DNA helicase K02314 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003483 509.0
DYD3_k127_4402133_3 Sugar (and other) transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 405.0
DYD3_k127_4402133_4 AAA domain (Cdc48 subfamily) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002159 366.0
DYD3_k127_4402133_5 COG2513 PEP phosphonomutase and related enzymes K01637 GO:0003674,GO:0003824,GO:0004451,GO:0005975,GO:0006081,GO:0006082,GO:0006097,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016830,GO:0016833,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0046487,GO:0071704 4.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002528 327.0
DYD3_k127_4402133_6 pyridoxamine 5'-phosphate K07005 - - 0.00000000000000000000000000000000000000000009184 171.0
DYD3_k127_4402133_7 Single-strand binding protein family K03111 - - 0.00000000000000000000000000000000000000001604 162.0
DYD3_k127_4402133_8 endonuclease III K01247 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003824,GO:0003905,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006304,GO:0006307,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008725,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0032131,GO:0032991,GO:0032993,GO:0033554,GO:0034641,GO:0035510,GO:0043170,GO:0043412,GO:0043733,GO:0043916,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363 3.2.2.21 0.00000000000000000000000000000000000166 150.0
DYD3_k127_4402133_9 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 0.0000000000000000000000000000000001633 134.0
DYD3_k127_4404748_0 Adenylate and Guanylate cyclase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002239 556.0
DYD3_k127_4404748_1 lactate racemase activity - - - 0.00000000000000000000000000000000000000000000000006464 199.0
DYD3_k127_4404748_2 SLBB domain K02237 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000009913 58.0
DYD3_k127_4405945_0 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002336 368.0
DYD3_k127_4405945_1 iron ion homeostasis K07165 - - 0.0000000000000000000000000000000000000007963 156.0
DYD3_k127_4405945_2 Stage II sporulation protein E (SpoIIE) - - - 0.00009384 47.0
DYD3_k127_4410974_0 cytochrome P450 K00493,K21257 - 1.14.14.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006044 397.0
DYD3_k127_4410974_1 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002895 296.0
DYD3_k127_4410974_10 Protein of unknown function (DUF1706) - - - 0.0000003233 64.0
DYD3_k127_4410974_2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000001712 261.0
DYD3_k127_4410974_3 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567 - 2.1.1.63 0.000000000000000000000000000000000000000000000000000000000000000000003863 243.0
DYD3_k127_4410974_4 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000001206 210.0
DYD3_k127_4410974_5 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000008317 171.0
DYD3_k127_4410974_6 Enoyl-CoA hydratase/isomerase K01692 - 4.2.1.17 0.000000000000000000000000000007886 122.0
DYD3_k127_4410974_7 Haem-degrading - - - 0.0000000000000000004541 96.0
DYD3_k127_4410974_8 Enoyl-CoA hydratase/isomerase K01692 - 4.2.1.17 0.00000000001227 70.0
DYD3_k127_4410974_9 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 GO:0003674,GO:0003824,GO:0004333,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006106,GO:0006108,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0050896,GO:0055114,GO:0071704,GO:0072350 4.2.1.2 0.00000000007846 64.0
DYD3_k127_4413293_0 ATP dependent DNA ligase domain protein K01971 - 6.5.1.1 2.135e-202 656.0
DYD3_k127_4413293_1 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000004446 125.0
DYD3_k127_4419884_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 3.211e-221 709.0
DYD3_k127_4419884_1 Belongs to the class-II aminoacyl-tRNA synthetase family K01892 - 6.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000313 258.0
DYD3_k127_4430579_0 PFAM Copper resistance D K07245 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005471 348.0
DYD3_k127_4430579_1 Bifunctional nuclease K08999 - - 0.0000002358 59.0
DYD3_k127_4433759_0 Pyruvate 2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit K00162,K21417 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009214 380.0
DYD3_k127_4433759_1 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161,K21416 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 344.0
DYD3_k127_4433759_2 3-beta hydroxysteroid dehydrogenase/isomerase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006705 307.0
DYD3_k127_4433759_3 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000587 256.0
DYD3_k127_4446810_0 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000004497 200.0
DYD3_k127_4446810_1 - - - - 0.000000000000000000000000000000000000000002116 164.0
DYD3_k127_4446810_2 Domain of unknown function DUF302 - - - 0.00000000000000000000000000000000002252 141.0
DYD3_k127_4446810_3 Archease protein family (MTH1598/TM1083) - - - 0.00000000000000000000005095 103.0
DYD3_k127_4446810_4 Sucrose-6F-phosphate phosphohydrolase - - - 0.0000000000003896 73.0
DYD3_k127_4446810_5 TIGRFAM Protein of - - - 0.00000000001827 72.0
DYD3_k127_4457975_0 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 389.0
DYD3_k127_4457975_1 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004725 380.0
DYD3_k127_4457975_2 HMGL-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002538 361.0
DYD3_k127_4457975_3 PFAM phospholipase Carboxylesterase K06999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002286 316.0
DYD3_k127_4457975_4 tRNA wobble adenosine to inosine editing K11991 - 3.5.4.33 0.00000000000000000000000000000000000000000000006497 183.0
DYD3_k127_4457975_5 - - - - 0.00000000000000000000000005762 119.0
DYD3_k127_4488287_0 TolB amino-terminal domain K03641 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998 - 0.00000000000000000000000000000000000000004094 164.0
DYD3_k127_4488287_1 Biopolymer transport protein ExbD/TolR K03560 - - 0.00000000006121 64.0
DYD3_k127_4488287_2 energy transducer activity K03646,K03832 - - 0.000000007812 67.0
DYD3_k127_4491192_0 copper-translocating P-type ATPase K17686 - 3.6.3.54 1.395e-246 774.0
DYD3_k127_4491192_1 copper-translocating P-type ATPase K17686 - 3.6.3.54 0.000000004265 57.0
DYD3_k127_4494130_0 DnaJ central domain K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 429.0
DYD3_k127_4494130_1 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535,K16363 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0008610,GO:0008654,GO:0008759,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016787,GO:0016810,GO:0016811,GO:0019213,GO:0019637,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044464,GO:0046467,GO:0046493,GO:0046872,GO:0046914,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 3.5.1.108,4.2.1.59 0.000000000000000000000000000000000000000000000000000000000000000000000000976 256.0
DYD3_k127_4494130_2 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.00000000000000000000000000000000000000000000000000000000000000005755 237.0
DYD3_k127_4494130_3 Methylates ribosomal protein L11 K02687 - - 0.00000000000000000000000000000000000000001344 164.0
DYD3_k127_4494130_4 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000000000000000000000001909 162.0
DYD3_k127_4494130_5 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.00000000000000000000000000000000001875 144.0
DYD3_k127_4494130_6 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 GO:0005575,GO:0005623,GO:0005886,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0044464,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.000000000000000000000000002073 116.0
DYD3_k127_4494130_7 Activates the tRNA-splicing ligase complex by facilitating the enzymatic turnover of catalytic subunit RtcB. Acts by promoting the guanylylation of RtcB, a key intermediate step in tRNA ligation. Can also alter the NTP specificity of RtcB such that ATP, dGTP or ITP is used efficiently - - - 0.00001476 52.0
DYD3_k127_4538168_0 heavy metal translocating P-type ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009523 587.0
DYD3_k127_4538168_1 Cytochrome C biogenesis protein transmembrane region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000342 244.0
DYD3_k127_4538168_2 transcriptional regulator - - - 0.000000000000000000000000001017 117.0
DYD3_k127_4538168_3 MFS_1 like family - - - 0.00000000000000000000001833 109.0
DYD3_k127_4538168_4 Sigma-70, region 4 K03088 - - 0.000000000000000000002464 106.0
DYD3_k127_4538168_5 Membrane transport protein MerF K19058 - - 0.000000000000000002672 87.0
DYD3_k127_4538168_6 Membrane transport protein MerF K19058 - - 0.000006426 54.0
DYD3_k127_4538168_7 MerT mercuric transport protein - - - 0.0001137 51.0
DYD3_k127_4538168_8 Heavy-metal-associated domain - - - 0.0005763 44.0
DYD3_k127_4540057_0 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001795 533.0
DYD3_k127_4540057_1 Type II secretion system (T2SS), protein F K02455,K02653 GO:0002790,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015628,GO:0015833,GO:0016020,GO:0032940,GO:0033036,GO:0042886,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098776 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005703 270.0
DYD3_k127_4540057_2 PFAM Lytic transglycosylase catalytic K08309 - - 0.00000000000000000000000000000000001104 145.0
DYD3_k127_4540057_3 Bacterial protein of unknown function (DUF839) K07093 - - 0.000000000000000000000000000001338 122.0
DYD3_k127_4552431_0 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004097 445.0
DYD3_k127_4552431_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007963 315.0
DYD3_k127_4552431_2 Sir2 family K12410 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001006 261.0
DYD3_k127_4552431_3 2-oxopent-4-enoate hydratase activity K02509,K02554 - 4.2.1.80 0.0000000000000000000004402 111.0
DYD3_k127_4552431_4 - - - - 0.00002003 53.0
DYD3_k127_4559322_0 TIGRFAM 40-residue YVTN family beta-propeller repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 581.0
DYD3_k127_4559322_1 Creatinine amidohydrolase K01470 - 3.5.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000004291 246.0
DYD3_k127_4559322_2 Uncharacterised MFS-type transporter YbfB - - - 0.0000000000000000000243 98.0
DYD3_k127_4562347_0 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005647 277.0
DYD3_k127_4562347_1 Cytochrome c oxidase subunit III K02276,K02299 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000008656 220.0
DYD3_k127_4562347_2 UbiA prenyltransferase family K02257 - 2.5.1.141 0.000000000000000000000000000000000000000000007404 173.0
DYD3_k127_4562347_3 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0015980,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0045333,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.141 0.000000000000000000000000001252 125.0
DYD3_k127_4562347_4 Prokaryotic Cytochrome C oxidase subunit IV K02277 - 1.9.3.1 0.00000000000000005181 88.0
DYD3_k127_4593887_0 O-acyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003848 368.0
DYD3_k127_4593887_1 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.0000000007539 64.0
DYD3_k127_4598082_0 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002512 284.0
DYD3_k127_4598082_1 Protein of unknown function (DUF1706) - - - 0.00000001169 62.0
DYD3_k127_4598453_0 Belongs to the IlvD Edd family - - - 2.064e-230 744.0
DYD3_k127_4598453_1 Pfam Adenylate and Guanylate cyclase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007621 608.0
DYD3_k127_4598453_2 oxidoreductase activity, acting on CH-OH group of donors K03366 - 1.1.1.304,1.1.1.76 0.000000000000000000000000000000000000000000000002735 181.0
DYD3_k127_4598453_3 Major Facilitator Superfamily - - - 0.00000000000000000000000000007752 130.0
DYD3_k127_4598453_4 MerR, DNA binding K19591 - - 0.000000000000001892 86.0
DYD3_k127_460016_0 PFAM AMP-dependent synthetase and ligase K00666,K01897,K02182,K18661 - 6.2.1.3,6.2.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005594 452.0
DYD3_k127_460016_1 Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001778 294.0
DYD3_k127_460016_2 Luciferase-like monooxygenase - - - 0.00000000000000000000000005374 123.0
DYD3_k127_460016_3 Thioesterase superfamily - - - 0.000000000000000003944 99.0
DYD3_k127_4608004_0 ABC-type branched-chain amino acid transport systems, periplasmic component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006908 400.0
DYD3_k127_4608004_1 transmembrane signaling receptor activity K02660,K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006909 358.0
DYD3_k127_4608004_10 Two component signalling adaptor domain K03408 - - 0.00000001684 62.0
DYD3_k127_4608004_2 Two component signalling adaptor domain K02487,K06596 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002471 338.0
DYD3_k127_4608004_3 CBS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004677 310.0
DYD3_k127_4608004_4 Transporter associated domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006824 265.0
DYD3_k127_4608004_5 carboxymethylenebutenolidase activity K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000001016 243.0
DYD3_k127_4608004_6 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000000000000000000000000000000006356 243.0
DYD3_k127_4608004_7 phosphorelay signal transduction system K02658 - - 0.000000000000000000000000000000001925 133.0
DYD3_k127_4608004_8 Belongs to the thioredoxin family K03671 GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 - 0.0000000000000000000000000000002212 129.0
DYD3_k127_4608004_9 Peptidase C26 K01658 - 4.1.3.27 0.0000000000000001855 90.0
DYD3_k127_4613540_0 4Fe-4S dicluster domain K00124 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005379 291.0
DYD3_k127_4613540_1 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.0000000000000000000000000000000000000000000000000000000000000001336 230.0
DYD3_k127_4613540_2 Polysulfide reductase - - - 0.000000000000000000000000000000000000000000000000002775 199.0
DYD3_k127_4613540_3 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 0.000002832 49.0
DYD3_k127_4637748_0 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002169 437.0
DYD3_k127_4637748_1 Carboxymuconolactone decarboxylase family - - - 0.0000000000000000000000000000000000000000000000000003177 194.0
DYD3_k127_4637748_2 Pfam Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000002493 175.0
DYD3_k127_4637748_3 DNA-templated transcription, initiation K03088 - - 0.00000000000000000003174 97.0
DYD3_k127_4637748_4 HAD-hyrolase-like K07025 - - 0.000000000000000000221 103.0
DYD3_k127_4637748_5 EamA-like transporter family - - - 0.000000000000000008685 85.0
DYD3_k127_4637748_6 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.00000000000004984 74.0
DYD3_k127_4637748_7 glyoxalase bleomycin resistance protein dioxygenase K04750 - - 0.000000001707 64.0
DYD3_k127_4637748_8 Histidine kinase - - - 0.00000002818 66.0
DYD3_k127_4640235_0 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000335 505.0
DYD3_k127_4640235_1 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000209 400.0
DYD3_k127_464644_0 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 8.105e-213 679.0
DYD3_k127_464644_1 Cupin domain - - - 0.000000000000000000000000000000000000000005065 162.0
DYD3_k127_464644_2 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000002118 134.0
DYD3_k127_464644_3 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000006721 105.0
DYD3_k127_464644_4 zinc ion binding K06204 - - 0.0000000002645 72.0
DYD3_k127_4671769_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 2017.0
DYD3_k127_4671769_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000028 300.0
DYD3_k127_4673376_0 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007179 452.0
DYD3_k127_4673376_1 Bacterial extracellular solute-binding protein K02027,K10236 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002252 365.0
DYD3_k127_4673376_2 CoA-transferase family III K18702 - 2.8.3.19 0.00000000000000000000000000000000000000000000000000000000000000000000000002302 271.0
DYD3_k127_4673376_3 Binding-protein-dependent transport system inner membrane component K02025,K10237 - - 0.000000000000000000000000000000000469 150.0
DYD3_k127_4673376_4 HpcH/HpaI aldolase/citrate lyase family - - - 0.000000000000001194 91.0
DYD3_k127_4673376_5 Acyltransferase family - - - 0.0001057 51.0
DYD3_k127_4675441_0 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002176 599.0
DYD3_k127_4675441_1 GTPase activity K07588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001902 292.0
DYD3_k127_4675441_2 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.0000000000000000000000000000000004785 136.0
DYD3_k127_4675441_3 Protein of unknown function (DUF1232) - - - 0.0000000000001989 84.0
DYD3_k127_4675441_4 NMT1-like family K07080 - - 0.0000000001842 70.0
DYD3_k127_4689666_0 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K08319 - 1.1.1.411 0.0000000000000000000000000000000000000000000000000000000000000000000000004304 261.0
DYD3_k127_4689666_1 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.00000000000000000000000000000000000000000000000000000000000000003636 230.0
DYD3_k127_4689666_2 cyclic diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000002189 190.0
DYD3_k127_4689666_3 hydrolase activity, acting on ester bonds - - - 0.00000000000000000000000000000000000005098 151.0
DYD3_k127_4689666_4 Dienelactone hydrolase - - - 0.0000000000000000000000000000000000002149 156.0
DYD3_k127_4689666_5 Catalyzes the conversion of maleate to fumarate K01799,K06033 - 4.1.1.76,5.2.1.1 0.0000000000000000000000000000000004668 140.0
DYD3_k127_4689666_6 Domain of unknown function (DUF427) - - - 0.00000000000000000000000000000002904 139.0
DYD3_k127_4689666_7 Stress-responsive transcriptional regulator - - - 0.0000000000000000004368 90.0
DYD3_k127_4689666_8 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000009003 53.0
DYD3_k127_4693908_0 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000968 274.0
DYD3_k127_4693908_1 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000003034 147.0
DYD3_k127_4693908_2 FAD dependent oxidoreductase K00303 - 1.5.3.1 0.000000000000000000000001344 111.0
DYD3_k127_4693908_3 MOSC domain - - - 0.00000000000000006364 84.0
DYD3_k127_4695093_0 TonB-dependent receptor K02014 - - 3.437e-216 691.0
DYD3_k127_4695093_1 lactoylglutathione lyase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002968 339.0
DYD3_k127_4695093_2 Sel1 domain protein repeat-containing protein K07126 - - 0.00000000000000000000000000000000000000000000000000000000001438 231.0
DYD3_k127_4695093_3 Protein of unknown function (DUF3830) - - - 0.0000000000000000000000000000000000000000000000005424 200.0
DYD3_k127_4695093_4 Endoribonuclease L-PSP - - - 0.0000000000000000000000000000000004594 136.0
DYD3_k127_4696576_0 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000147 334.0
DYD3_k127_4696576_1 Enoyl-CoA hydratase/isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009464 267.0
DYD3_k127_4696576_2 III protein, CoA-transferase family - - - 0.00000000001376 66.0
DYD3_k127_4710065_0 Peptidase M16 K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003675 309.0
DYD3_k127_4710065_1 Thioredoxin - - - 0.0000000000000000000000000000000001313 137.0
DYD3_k127_4710065_2 Outer membrane lipoprotein Slp family K07285 - - 0.00000000000000000000000000000006644 135.0
DYD3_k127_4710065_3 PFAM Alcohol dehydrogenase zinc-binding domain protein K00344 - 1.6.5.5 0.000000000000000000000000008232 111.0
DYD3_k127_4710065_4 ABC-2 family transporter protein K01992 - - 0.000000000000000001491 86.0
DYD3_k127_4710065_5 - - - - 0.00005769 54.0
DYD3_k127_471431_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008174 398.0
DYD3_k127_471431_1 Mannose-6-phosphate isomerase K00971,K16011 - 2.7.7.13,5.3.1.8 0.000000000000000000000000000000000000000000000000008626 196.0
DYD3_k127_471431_2 - - - - 0.0000000000000000000000000002905 120.0
DYD3_k127_471431_3 DNA ligase K01971 - 6.5.1.1 0.0003329 49.0
DYD3_k127_4720711_0 DEAD/H associated K03724 - - 0.0 1175.0
DYD3_k127_4720711_1 Luciferase-like monooxygenase K04091 - 1.14.14.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002694 461.0
DYD3_k127_4720711_2 Uncharacterized protein conserved in bacteria (DUF2236) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001337 278.0
DYD3_k127_4720711_3 Acetyltransferase K03829 - - 0.000000000000000000000000000000000000000000001586 181.0
DYD3_k127_4720711_4 NADPH-dependent FMN reductase K00299 - 1.5.1.38 0.00000000000000000000000000000000000001284 160.0
DYD3_k127_4720711_5 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.000000000000000000000000000000000002444 141.0
DYD3_k127_4720711_6 Glutathione peroxidase - - - 0.0000000000000006895 81.0
DYD3_k127_4720711_7 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.00000000000002009 77.0
DYD3_k127_4736324_0 Membrane protein, TerC - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003551 268.0
DYD3_k127_4736324_1 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009594 249.0
DYD3_k127_4736324_2 AI-2E family transporter - - - 0.0000000002863 62.0
DYD3_k127_4751616_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.0 1122.0
DYD3_k127_4751616_1 endonuclease activity - - - 0.0000000000000000000000000000000000005777 147.0
DYD3_k127_4751616_2 ACT domain K01653 - 2.2.1.6 0.00000003851 60.0
DYD3_k127_4755164_0 ATP:ADP antiporter activity K03301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001517 289.0
DYD3_k127_4755164_1 lactoylglutathione lyase activity - - - 0.000000000000000000000000000000000000000000000000000000000000005308 226.0
DYD3_k127_4762630_0 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.00000000000000000000000000000000000000000000000000000001503 206.0
DYD3_k127_4762630_1 Sulfite exporter TauE/SafE - - - 0.000000000000000000000000000000000000000000006331 171.0
DYD3_k127_4762630_2 Cobalamin biosynthesis protein cbiG - - - 0.00000000000000000000000000000000000007379 154.0
DYD3_k127_4762630_3 Major Facilitator Superfamily K19577 - - 0.00000000000000000002194 106.0
DYD3_k127_4762630_4 Zinc-binding dehydrogenase - - - 0.0002425 44.0
DYD3_k127_4773633_0 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001772 430.0
DYD3_k127_4773633_1 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009785 344.0
DYD3_k127_4775587_0 Carboxyl transferase domain - - - 1.002e-209 663.0
DYD3_k127_4775587_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000001729 117.0
DYD3_k127_4775587_2 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate K02233 - 2.7.8.26 0.0000000000000001533 84.0
DYD3_k127_4780594_0 Abc transporter K09817 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002255 259.0
DYD3_k127_4780594_1 ABC-type Mn2 Zn2 transport K09816 - - 0.00000000000000000000000000000000000000000000000000000000000007885 223.0
DYD3_k127_4781449_0 PFAM Methionine synthase, vitamin-B12 independent K00549 - 2.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000006915 267.0
DYD3_k127_4781449_1 PFAM acyl-CoA dehydrogenase domain protein K00249,K11731 - 1.3.8.7 0.000000000000000000000000000000000000000000000000000000000005983 213.0
DYD3_k127_4781449_2 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.0000000000000000000000000000001295 139.0
DYD3_k127_4782091_0 cAMP phosphodiesterases class-II K01120 - 3.1.4.17 0.00000000000000000000000000000000000000000000000000000000000002735 222.0
DYD3_k127_4782091_1 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000104 181.0
DYD3_k127_4782091_2 Pyridoxal-phosphate dependent enzyme K05396 - 4.4.1.15 0.000000000000000000000000000000000009329 143.0
DYD3_k127_4802802_0 Glutamate synthase central domain K00265,K00284 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006541,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0015930,GO:0016020,GO:0016053,GO:0016491,GO:0016638,GO:0019676,GO:0019740,GO:0019752,GO:0040007,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.13,1.4.1.14,1.4.7.1 0.0 1279.0
DYD3_k127_4802802_1 Flavin containing amine oxidoreductase K00266 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 1.4.1.13,1.4.1.14 5.678e-202 634.0
DYD3_k127_4830667_0 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006704 580.0
DYD3_k127_4830667_1 PFAM thioesterase superfamily - - - 0.0000000000000000000000000000000000000000000000004407 187.0
DYD3_k127_4830667_2 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02034 - - 0.000000007043 57.0
DYD3_k127_4831140_0 UDP-N-acetylmuramate-L-alanine ligase activity K01924 - 6.3.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002455 553.0
DYD3_k127_4831140_1 Belongs to the SEDS family K03588 - - 0.000000000000000000000000000000000000000000000000008601 183.0
DYD3_k127_4841431_0 AhpC/TSA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000742 324.0
DYD3_k127_4841431_1 PFAM SMP-30 Gluconolaconase LRE domain protein K01053 - 3.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003931 288.0
DYD3_k127_4841431_2 3-isopropylmalate dehydrogenase activity K00052,K05824 GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0019878,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0047046,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.85,1.1.1.87 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003461 277.0
DYD3_k127_4841431_3 SnoaL-like polyketide cyclase - - - 0.00000000000000000000000000000000000000000003432 164.0
DYD3_k127_4841431_4 - - - - 0.00000000000000000001835 95.0
DYD3_k127_4841431_5 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000002056 62.0
DYD3_k127_4842587_0 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000003533 247.0
DYD3_k127_4842587_1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059,K19550 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0016628,GO:0016999,GO:0017000,GO:0017144,GO:0036094,GO:0044237,GO:0044249,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.1.1.100 0.0000000000000000000000000000000000000000000006134 173.0
DYD3_k127_4853184_0 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K00666 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007382 294.0
DYD3_k127_4853184_1 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000001358 196.0
DYD3_k127_4861729_0 UPF0365 protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001489 487.0
DYD3_k127_4861729_1 NfeD-like C-terminal, partner-binding K07403 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 455.0
DYD3_k127_4863046_0 Hydantoinase/oxoprolinase K01473 - 3.5.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002069 505.0
DYD3_k127_4863046_1 Rieske [2Fe-2S] domain K21323 - 1.14.13.229,1.14.19.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 374.0
DYD3_k127_4863046_2 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003552 291.0
DYD3_k127_4863046_3 polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000001087 237.0
DYD3_k127_4863046_4 Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000783 247.0
DYD3_k127_4863046_5 Lytic transglycosylase catalytic K08307 - - 0.00000000000000000000000000000000000000000000000000000000000003779 230.0
DYD3_k127_4863046_6 PFAM Short-chain dehydrogenase reductase SDR K00059 GO:0000166,GO:0003674,GO:0003824,GO:0004312,GO:0004316,GO:0005488,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0030497,GO:0032787,GO:0036094,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0072330,GO:0097159,GO:1901265,GO:1901363,GO:1901576 1.1.1.100 0.000000000000000000000000000000000000000000000000007905 202.0
DYD3_k127_4865847_0 COG3653 N-acyl-D-aspartate D-glutamate deacylase - - - 7.64e-278 863.0
DYD3_k127_4865847_1 Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate K10206 - 2.6.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001917 534.0
DYD3_k127_4865847_10 Membrane - - - 0.00000001314 63.0
DYD3_k127_4865847_2 Glycosyl Hydrolase Family 88 K18581 - 3.2.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004432 389.0
DYD3_k127_4865847_3 Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA) K01661 - 4.1.3.36 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002938 353.0
DYD3_k127_4865847_4 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161,K21416 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 340.0
DYD3_k127_4865847_5 Transketolase, pyrimidine binding domain K21417 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004562 289.0
DYD3_k127_4865847_6 MmgE/PrpD family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004996 280.0
DYD3_k127_4865847_7 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004719 257.0
DYD3_k127_4865847_8 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008786 245.0
DYD3_k127_4865847_9 alpha/beta hydrolase fold - - - 0.000000000000000000000000000001357 123.0
DYD3_k127_486931_0 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003382 377.0
DYD3_k127_486931_1 Encapsulating protein for peroxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 299.0
DYD3_k127_486931_2 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000004408 212.0
DYD3_k127_486931_3 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family - - - 0.000000000000000000000000000000000000000000000000000001505 198.0
DYD3_k127_486931_4 Evidence 4 Homologs of previously reported genes of K09700 - - 0.0000000000000000000000000000000001836 137.0
DYD3_k127_486931_5 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000002702 106.0
DYD3_k127_486931_7 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 0.0000000001381 62.0
DYD3_k127_4872781_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 388.0
DYD3_k127_4894987_0 Adenylate and Guanylate cyclase catalytic domain - - - 2.919e-267 862.0
DYD3_k127_4894987_1 Ring hydroxylating alpha subunit (catalytic domain) K03268,K05708 - 1.14.12.11,1.14.12.19,1.14.12.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005294 358.0
DYD3_k127_4894987_2 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.00000000000000000000000000000000000000000000000000000000002956 212.0
DYD3_k127_4894987_3 protein conserved in cyanobacteria - - - 0.0000000000000000000000000000000000000000001951 170.0
DYD3_k127_4894987_4 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.000000000000000000000000000001709 128.0
DYD3_k127_4894987_5 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases K00320 - 1.5.98.2 0.00004286 49.0
DYD3_k127_490706_0 PFAM ROK family protein K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000001491 184.0
DYD3_k127_490706_1 Probably catalyzes the deacetylation of acetylated carbohydrates an important step in the degradation of oligosaccharides K03478 - 3.5.1.105 0.00000000000000000000000000000000000000000001328 181.0
DYD3_k127_490706_2 Alcohol dehydrogenase GroES-associated - - - 0.00000000000000000000000000000749 133.0
DYD3_k127_490706_3 Methyltransferase K02493 - 2.1.1.297 0.000000000000000000000008953 112.0
DYD3_k127_4911704_0 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005286 259.0
DYD3_k127_4911704_1 Enoyl-CoA hydratase/isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000025 231.0
DYD3_k127_4911704_2 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000003868 133.0
DYD3_k127_4911704_3 GTP cyclohydrolase I K00950,K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006082,GO:0006139,GO:0006575,GO:0006725,GO:0006729,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008616,GO:0009058,GO:0009108,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0019752,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034404,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0040007,GO:0042455,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046116,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617,GO:1901657,GO:1901659 2.7.6.3,3.5.4.16 0.0000000000000000000000000000002905 134.0
DYD3_k127_4911704_4 TIGRFAM 6-pyruvoyl tetrahydropterin synthase QueD family protein K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000007713 121.0
DYD3_k127_4917189_0 PFAM luciferase family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003805 399.0
DYD3_k127_4917189_1 Acyl CoA acetate 3-ketoacid CoA transferase beta subunit K01040 - 2.8.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002152 287.0
DYD3_k127_4917189_2 LamB/YcsF family K07160 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001629 277.0
DYD3_k127_4917189_3 transferase activity, transferring glycosyl groups K20444 - - 0.0000000000000000000000000006715 117.0
DYD3_k127_49375_0 glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001353 469.0
DYD3_k127_49375_1 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008705 355.0
DYD3_k127_49375_2 PFAM Extracellular ligand-binding receptor K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001198 250.0
DYD3_k127_4948417_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 3.438e-216 687.0
DYD3_k127_4948417_1 DHH family K06881 - 3.1.13.3,3.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000001132 248.0
DYD3_k127_4948417_2 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.0000000000000000000000000007003 117.0
DYD3_k127_4948417_3 Protein of unknown function (DUF503) K09764 - - 0.0000000000000000003503 91.0
DYD3_k127_4950095_0 Aminotransferase class I and II K10206,K14261 - 2.6.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007591 512.0
DYD3_k127_4950095_1 Bacterial sugar transferase K03606,K20997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004676 485.0
DYD3_k127_4950095_2 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008865 437.0
DYD3_k127_4950095_3 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007538 344.0
DYD3_k127_4950095_4 7 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase K00950,K13940 - 2.7.6.3,4.1.2.25 0.0000000000000000000000000000000001131 139.0
DYD3_k127_4950095_5 Sigma-70, region 4 K03088 GO:0005575,GO:0005618,GO:0005623,GO:0006355,GO:0006950,GO:0006979,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0030312,GO:0031323,GO:0031326,GO:0033554,GO:0034605,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051409,GO:0051716,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:1903506,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000005222 137.0
DYD3_k127_4950095_6 Glycosyl transferase - - - 0.0000000000000000000000000000346 126.0
DYD3_k127_4950095_7 -O-antigen - - - 0.000000000000000000000006109 119.0
DYD3_k127_4950095_8 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.0000000000000000008559 100.0
DYD3_k127_4963134_0 Domain of unknown function (DUF4139) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003292 475.0
DYD3_k127_4963134_1 MOFRL family K11529 - 2.7.1.165 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005871 439.0
DYD3_k127_4963134_2 DegT/DnrJ/EryC1/StrS aminotransferase family K10907 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002848 409.0
DYD3_k127_4963134_3 - - - - 0.0000000000000000000000000004339 126.0
DYD3_k127_4979139_0 aldo keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003681 364.0
DYD3_k127_4979139_1 ThiJ PfpI - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004245 257.0
DYD3_k127_4979139_2 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K01781 - 5.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000002036 233.0
DYD3_k127_4979139_3 Redoxin - - - 0.000001373 50.0
DYD3_k127_4992981_0 UDP binding domain K02472 - 1.1.1.336 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004109 529.0
DYD3_k127_4992981_1 Iron-sulfur cluster-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003089 475.0
DYD3_k127_4992981_2 GDP-mannose 4,6 dehydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002763 400.0
DYD3_k127_4992981_3 UDP-4-amino-4-deoxy-L-arabinose aminotransferase K13010 - 2.6.1.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001569 380.0
DYD3_k127_4992981_4 MobA-like NTP transferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002589 299.0
DYD3_k127_4992981_5 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000003214 138.0
DYD3_k127_5002099_0 xanthine dehydrogenase activity K04108 - 1.3.7.9 5.528e-196 624.0
DYD3_k127_5002099_1 phosphorelay signal transduction system K02481,K07713,K07714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005843 472.0
DYD3_k127_5002099_2 2Fe-2S -binding domain protein K03518 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000001339 237.0
DYD3_k127_5002099_3 PFAM ATP-binding region ATPase domain protein K07709 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000002513 193.0
DYD3_k127_5034638_0 CoA transferase having broad substrate specificity for short-chain acyl-CoA thioesters with the activity decreasing when the length of the carboxylic acid chain exceeds four carbons K01026 - 2.8.3.1 7.717e-237 749.0
DYD3_k127_5034638_1 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K01781,K20023 - 4.2.1.156,4.2.1.42,5.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007383 409.0
DYD3_k127_5044169_0 Belongs to the peptidase M48B family K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007666 356.0
DYD3_k127_5044169_1 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621,K21576,K21577 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.21.4.2,1.21.4.3,1.21.4.4,2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003987 295.0
DYD3_k127_5044169_2 Uncharacterized ACR, COG1399 K07040 - - 0.00000000000000000000000002061 115.0
DYD3_k127_5044169_3 Ribosomal L32p protein family K02911 GO:0000027,GO:0000302,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006950,GO:0006979,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050896,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1990904 - 0.000000000000000001596 89.0
DYD3_k127_5045310_0 Putative modulator of DNA gyrase K03568 - - 1.349e-208 661.0
DYD3_k127_5045310_1 metallopeptidase activity K03592 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007553 576.0
DYD3_k127_5045310_2 Molybdopterin biosynthesis K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003515 364.0
DYD3_k127_5045310_3 PFAM Transketolase, thiamine diphosphate binding domain K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000009186 197.0
DYD3_k127_5045310_4 RDD family - - - 0.000000000000056 82.0
DYD3_k127_5066884_0 Glycosyl transferase 4-like domain - - - 0.0000000000000000000000000000000000000002608 164.0
DYD3_k127_5066884_1 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000003391 140.0
DYD3_k127_5066884_2 PFAM glycosyl transferase group 1 - - - 0.00000000000000000000000000007639 134.0
DYD3_k127_5066884_3 PFAM Methyltransferase type 11 - - - 0.00000000000000000000005591 115.0
DYD3_k127_5066884_4 methyltransferase - - - 0.000000000000000000002816 103.0
DYD3_k127_5066884_5 polysaccharide biosynthetic process K03183,K15256 - 2.1.1.163,2.1.1.201 0.00000000000000000003708 100.0
DYD3_k127_5066884_6 protein-(glutamine-N5) methyltransferase activity - - - 0.00000000001586 74.0
DYD3_k127_5066884_7 ubiE/COQ5 methyltransferase family - - - 0.0000000277 67.0
DYD3_k127_510194_0 SMP-30/Gluconolaconase/LRE-like region K01053 - 3.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007499 513.0
DYD3_k127_510194_1 Cobalamin-independent synthase, Catalytic domain K00549,K22363 - 2.1.1.14,4.4.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 499.0
DYD3_k127_510194_10 Glyoxalase-like domain - - - 0.0000000000000000000000000000004938 134.0
DYD3_k127_510194_11 Luciferase-like monooxygenase - - - 0.00000000000000000000007397 100.0
DYD3_k127_510194_12 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.000000004753 60.0
DYD3_k127_510194_2 ABC transporter K02049 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002974 319.0
DYD3_k127_510194_3 Transglycosylase SLT domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002652 295.0
DYD3_k127_510194_4 ABC transporter, phosphonate, periplasmic substrate-binding protein K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007749 283.0
DYD3_k127_510194_5 PFAM luciferase-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000001585 256.0
DYD3_k127_510194_6 Binding-protein-dependent transport system inner membrane component K02050 - - 0.00000000000000000000000000000000000000000000000000000000000000003311 231.0
DYD3_k127_510194_7 Binding-protein-dependent transport system inner membrane component K02050 - - 0.0000000000000000000000000000000000000000000000000000000000008231 229.0
DYD3_k127_510194_8 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000005533 150.0
DYD3_k127_510194_9 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000004081 153.0
DYD3_k127_512154_0 ABC-type transport system involved in lipoprotein release permease component K02004,K09808 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008104,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0032991,GO:0033036,GO:0034613,GO:0044425,GO:0044459,GO:0044464,GO:0044872,GO:0044873,GO:0044874,GO:0051179,GO:0051641,GO:0070727,GO:0071944,GO:0072657,GO:0089705,GO:0098796,GO:0098797,GO:1990778 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002791 361.0
DYD3_k127_512154_1 tRNA synthetases class II (D, K and N) K04567 - 6.1.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006383 288.0
DYD3_k127_512154_2 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.00000000000000000000000000000000000000000000000000000000000000001996 231.0
DYD3_k127_5127290_0 Belongs to the UbiD family K16874 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003033 453.0
DYD3_k127_5127290_1 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005062 248.0
DYD3_k127_5147863_0 Radical SAM superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000825 489.0
DYD3_k127_5147863_1 Iron-sulfur cluster-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007232 317.0
DYD3_k127_5147863_2 ubiquinone menaquinone biosynthesis - - - 0.00000000000000000000000000000000000000000000000000000000001741 228.0
DYD3_k127_5147863_3 ubiE/COQ5 methyltransferase family - - - 0.000000000001328 78.0
DYD3_k127_5148307_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 7.554e-309 968.0
DYD3_k127_5148307_1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K01652 - 2.2.1.6 1.316e-215 685.0
DYD3_k127_5148307_2 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004455,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006549,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009097,GO:0009099,GO:0009987,GO:0016043,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0022607,GO:0036094,GO:0042802,GO:0043167,GO:0043169,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046872,GO:0048037,GO:0050661,GO:0050662,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0097159,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 517.0
DYD3_k127_5148307_3 ACT domain K01653 GO:0003674,GO:0003824,GO:0003984,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005948,GO:0006082,GO:0006520,GO:0006549,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009097,GO:0009099,GO:0009987,GO:0016053,GO:0016740,GO:0016744,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494,GO:1990234 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000075 217.0
DYD3_k127_5148307_4 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000000000164 190.0
DYD3_k127_5148307_5 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.0000000000000000000000000000000000000000000002343 180.0
DYD3_k127_5149472_0 Adenylate and Guanylate cyclase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002572 314.0
DYD3_k127_5149472_1 PFAM Integrase - - - 0.0000000000000000000000000000000000000000157 161.0
DYD3_k127_5149472_2 PFAM Integrase - - - 0.00000014 60.0
DYD3_k127_5149472_3 Thermolysin metallopeptidase, catalytic domain - - - 0.00004114 57.0
DYD3_k127_5149472_4 transposition - - - 0.00006764 51.0
DYD3_k127_5152890_0 Belongs to the GARS family K01945 - 6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002187 463.0
DYD3_k127_5152890_1 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 - 2.7.7.87 0.0000000000000000000000000000000000000000000009158 186.0
DYD3_k127_5152890_2 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.00000000000000000000000000000000002008 150.0
DYD3_k127_5152890_3 O-linked GlcNAc transferase - - - 0.00000000000000000000000000000001419 138.0
DYD3_k127_5153357_0 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161,K11381 - 1.2.4.1,1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007657 425.0
DYD3_k127_5153357_1 Pyruvate dehydrogenase K00162 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 402.0
DYD3_k127_5153357_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.0000000000000000000000000000000002552 134.0
DYD3_k127_5153357_3 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.00000000000000000000000000008332 123.0
DYD3_k127_5153357_4 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K00162,K00627 - 1.2.4.1,2.3.1.12 0.0000000000000000000002646 107.0
DYD3_k127_5157233_0 Transketolase, pyrimidine binding domain K11381 - 1.2.4.4 3.755e-283 879.0
DYD3_k127_5157233_1 Serine/Threonine protein kinases, catalytic domain K12132 - 2.7.11.1 0.00000000000008178 82.0
DYD3_k127_5157736_0 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002038 462.0
DYD3_k127_5157736_1 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001907 464.0
DYD3_k127_5157736_2 peroxidase activity K00435 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001798 282.0
DYD3_k127_5157736_3 Flavin containing amine oxidoreductase K00266 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 1.4.1.13,1.4.1.14 0.0000000000000000000000000000000000000000000000000003658 187.0
DYD3_k127_5157736_4 Mycothiol maleylpyruvate isomerase N-terminal domain - - - 0.000000000000000000000000000000000000000000000000003701 186.0
DYD3_k127_5157736_5 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K00363,K05710 - 1.7.1.15 0.000000000000000000000000000412 118.0
DYD3_k127_5157736_6 - - - - 0.00000000000004522 79.0
DYD3_k127_5161571_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 7.542e-266 838.0
DYD3_k127_5161571_1 secondary active sulfate transmembrane transporter activity K06901 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003329 509.0
DYD3_k127_5161571_2 'glutamate synthase K00528,K03388 - 1.18.1.2,1.19.1.1,1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 357.0
DYD3_k127_5161571_3 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000117 109.0
DYD3_k127_5161571_4 PFAM GGDEF domain containing protein - - - 0.000000000001583 79.0
DYD3_k127_5173144_0 Maltogenic Amylase, C-terminal domain K05343 - 3.2.1.1,5.4.99.16 1.923e-226 707.0
DYD3_k127_5173144_1 Phosphotransferase enzyme family K00700,K05343,K16146 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0005984,GO:0005991,GO:0005992,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016310,GO:0034637,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044424,GO:0044444,GO:0044464,GO:0046351,GO:0046835,GO:0071704,GO:0071944,GO:1901576 2.4.1.18,2.7.1.175,3.2.1.1,5.4.99.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000001914 276.0
DYD3_k127_5173144_2 Iron/manganese superoxide dismutases, C-terminal domain K04564 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000002129 213.0
DYD3_k127_5173144_3 - - - - 0.00000000000000000289 94.0
DYD3_k127_5173144_4 - - - - 0.0000000000003052 73.0
DYD3_k127_5173144_5 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.000000003394 63.0
DYD3_k127_5178382_0 Membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 444.0
DYD3_k127_5178382_1 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 0.000000000000000000000000000000000000000000000873 173.0
DYD3_k127_5178382_2 Dehydratase family - - - 0.00000000000002253 74.0
DYD3_k127_5178382_3 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 0.00000004533 55.0
DYD3_k127_5190058_0 two component, sigma54 specific, transcriptional regulator, Fis family K07712 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004475 403.0
DYD3_k127_5190058_1 enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000001064 207.0
DYD3_k127_5190058_2 hydratase K02509,K18364 - 4.2.1.132,4.2.1.80 0.00000000000000000000000000000000000000000002086 174.0
DYD3_k127_5190058_3 dehydratase - - - 0.00000000000000000000000000000000000000009915 167.0
DYD3_k127_5190058_4 NUDIX domain - - - 0.0000000000000000000000000000000000002789 155.0
DYD3_k127_5190058_6 Aldolase/RraA - - - 0.000001186 55.0
DYD3_k127_5190058_7 iron ion homeostasis - - - 0.000003977 57.0
DYD3_k127_5190058_8 response regulator K02481 - - 0.0000126 52.0
DYD3_k127_5210653_0 O-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000375 270.0
DYD3_k127_5210653_1 HD domain K07023 - - 0.0000000000000000000000000000000000000000000000000000000000000000299 231.0
DYD3_k127_5210653_2 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000005478 222.0
DYD3_k127_5210653_3 - - - - 0.00000000000000000000000000002631 121.0
DYD3_k127_5210653_5 Appr-1'-p processing enzyme - - - 0.000000000002893 75.0
DYD3_k127_5220271_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008797 330.0
DYD3_k127_5220271_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 306.0
DYD3_k127_5220271_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 3.6.3.14 0.0000003262 52.0
DYD3_k127_5238347_0 Rieske 2Fe-2S domain protein K16319,K18074,K18242 - 1.14.12.1,1.14.12.15,1.14.13.172 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003949 532.0
DYD3_k127_5238347_1 Ring hydroxylating beta subunit K16320 - 1.14.12.1 0.000000000000000000000000000000000000000000000000001453 190.0
DYD3_k127_5241823_0 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 440.0
DYD3_k127_5241823_1 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002361 426.0
DYD3_k127_5241823_2 aldo keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 344.0
DYD3_k127_5241823_3 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002722 268.0
DYD3_k127_5241823_4 ABC-2 type transporter K01992 - - 0.000000000000000000000000000000000000000000000000000000005909 214.0
DYD3_k127_5241823_5 ABC-type multidrug transport system ATPase component K01990 - - 0.000000000000000000000000000001606 125.0
DYD3_k127_5242537_0 Insulinase (Peptidase family M16) K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 450.0
DYD3_k127_5242537_1 Uracil-DNA glycosylase K21929 GO:0003674,GO:0003824,GO:0004844,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0033958,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0048037,GO:0050896,GO:0051536,GO:0051540,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0140097,GO:1901360 3.2.2.27 0.0000000000000002222 79.0
DYD3_k127_5242537_2 HlyD family secretion protein K01993 - - 0.00000000001092 75.0
DYD3_k127_5242537_3 COG0842 ABC-type multidrug transport system, permease component K01992 - - 0.000000515 61.0
DYD3_k127_5258883_0 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002588 338.0
DYD3_k127_5258883_1 Domain of unknown function (DUF1730) K18979 - 1.17.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000006273 271.0
DYD3_k127_5258883_2 peptide deformylase activity K01462 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000000000001366 229.0
DYD3_k127_5258883_3 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.00000000000000000000000000000005172 131.0
DYD3_k127_5258883_4 Belongs to the Dps family K04047 - - 0.0000000000002975 75.0
DYD3_k127_5258883_5 - - - - 0.00001535 53.0
DYD3_k127_5260502_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008999 581.0
DYD3_k127_5260502_1 Vacuole effluxer Atg22 like K06902 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000372 468.0
DYD3_k127_5260502_2 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K03151 GO:0000049,GO:0002937,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0017144,GO:0018130,GO:0019438,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0042364,GO:0042723,GO:0042724,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:0090304,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002128 393.0
DYD3_k127_5260502_3 isomerase B K01808 - 5.3.1.6 0.00000000000000000000000000000000000000000000000000004626 190.0
DYD3_k127_5260502_4 Phosphate acyltransferases - - - 0.000000000000000000000000000000000000000000000007827 192.0
DYD3_k127_5260502_5 Exonuclease of the beta-lactamase fold involved in RNA processing K07576 - - 0.000000000000000000000000000000004671 132.0
DYD3_k127_5260502_6 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.0000006569 62.0
DYD3_k127_5261614_0 cyclic 2,3-diphosphoglycerate synthetase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 614.0
DYD3_k127_5261614_1 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004551 509.0
DYD3_k127_5261614_10 Universal stress protein - - - 0.00000000002385 64.0
DYD3_k127_5261614_2 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.00000000000000000000000000000000000000005113 158.0
DYD3_k127_5261614_3 Hsp20/alpha crystallin family - - - 0.00000000000000000000000000003392 121.0
DYD3_k127_5261614_4 PFAM UspA domain protein - - - 0.00000000000000000000004658 104.0
DYD3_k127_5261614_5 - - - - 0.0000000000000000000003519 97.0
DYD3_k127_5261614_6 Universal stress protein family - - - 0.000000000000000000001521 102.0
DYD3_k127_5261614_7 PFAM CBS domain - - - 0.000000000000000000003348 102.0
DYD3_k127_5261614_8 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.00000000000000000001907 96.0
DYD3_k127_5267035_0 Amidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008201 529.0
DYD3_k127_5271995_0 TIGRFAM malto-oligosyltrehalose trehalohydrolase K01236 - 3.2.1.141 1.475e-231 752.0
DYD3_k127_5271995_1 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB K16147 - 2.4.99.16 2.02e-226 738.0
DYD3_k127_5271995_2 PFAM alpha amylase, catalytic K06044 - 5.4.99.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 402.0
DYD3_k127_5271995_3 Starch synthase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005241 401.0
DYD3_k127_5271995_4 PFAM Glycosyl transferases group 1 K13057 - 2.4.1.245 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 360.0
DYD3_k127_5271995_5 Maltogenic Amylase, C-terminal domain K05343 - 3.2.1.1,5.4.99.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 310.0
DYD3_k127_5271995_6 Belongs to the glycosyl hydrolase 57 family K07405 - 3.2.1.1 0.000000000000000000002107 106.0
DYD3_k127_5275366_0 Protein of unknown function (DUF1272) K09984 - - 0.00000000000000000000000000000000000003511 147.0
DYD3_k127_5275366_1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000002005 91.0
DYD3_k127_5275366_2 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine - - - 0.000000000000001657 81.0
DYD3_k127_5275366_3 Thioredoxin - - - 0.000001534 61.0
DYD3_k127_5287413_0 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007016 421.0
DYD3_k127_5287413_1 Belongs to the SEDS family K03588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001781 259.0
DYD3_k127_5287413_2 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.000000000000000000000000000006821 119.0
DYD3_k127_5288178_0 Luciferase-like monooxygenase - - - 6.06e-214 670.0
DYD3_k127_5288178_1 solute-binding protein K02027 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001573 385.0
DYD3_k127_5288178_2 Acyl-CoA dehydrogenase, middle domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001259 367.0
DYD3_k127_5288178_3 Binding-protein-dependent transport system inner membrane component K02025 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 355.0
DYD3_k127_5288178_4 Binding-protein-dependent transport systems inner membrane component K02026 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006599 327.0
DYD3_k127_5288178_5 N-acyl phosphatidylethanolamine phospholipase D K13985 GO:0001523,GO:0001659,GO:0001750,GO:0003674,GO:0003824,GO:0004620,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005737,GO:0005768,GO:0005769,GO:0005794,GO:0005829,GO:0005886,GO:0005929,GO:0006066,GO:0006576,GO:0006629,GO:0006644,GO:0006650,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007568,GO:0008081,GO:0008150,GO:0008152,GO:0008270,GO:0009308,GO:0009987,GO:0012505,GO:0016020,GO:0016101,GO:0016298,GO:0016787,GO:0016788,GO:0019637,GO:0031090,GO:0031253,GO:0031347,GO:0031349,GO:0031410,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0031982,GO:0032101,GO:0032103,GO:0032501,GO:0032502,GO:0034308,GO:0034641,GO:0035900,GO:0036477,GO:0042439,GO:0042578,GO:0042592,GO:0042622,GO:0042802,GO:0042995,GO:0043005,GO:0043025,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043603,GO:0044106,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0044297,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044441,GO:0044444,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0045595,GO:0045597,GO:0045598,GO:0045600,GO:0046337,GO:0046486,GO:0046872,GO:0046914,GO:0048518,GO:0048519,GO:0048521,GO:0048522,GO:0048583,GO:0048584,GO:0048871,GO:0050727,GO:0050729,GO:0050789,GO:0050793,GO:0050794,GO:0050795,GO:0050896,GO:0051094,GO:0060170,GO:0060259,GO:0065007,GO:0065008,GO:0070013,GO:0070290,GO:0070291,GO:0070292,GO:0071704,GO:0071944,GO:0080134,GO:0090335,GO:0090336,GO:0097458,GO:0097708,GO:0097730,GO:0097731,GO:0097733,GO:0098588,GO:0098590,GO:0120025,GO:0120038,GO:1901564,GO:1901615,GO:1903998,GO:1903999,GO:2000252 3.1.4.54 0.00000000000000000000000000000000000000000000000000004902 192.0
DYD3_k127_5288178_6 -acetyltransferase - - - 0.0000000000000000000000000000000000000000458 157.0
DYD3_k127_5288178_7 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity - - - 0.0000000000000000000002 100.0
DYD3_k127_5288178_8 Carboxymuconolactone decarboxylase family - - - 0.00000008343 59.0
DYD3_k127_531366_0 PFAM Radical SAM superfamily - - - 4.625e-217 689.0
DYD3_k127_531366_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009083 449.0
DYD3_k127_531366_2 Aminotransferase class-III K00822,K00833 - 2.6.1.18,2.6.1.62 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 437.0
DYD3_k127_531366_3 Taurine catabolism dioxygenase TauD, TfdA family K06912 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006324 409.0
DYD3_k127_531366_4 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid K00020 - 1.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 332.0
DYD3_k127_531366_5 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000000007246 211.0
DYD3_k127_531366_6 protein conserved in cyanobacteria - - - 0.00000000000000000000000000000000000000000000000001994 185.0
DYD3_k127_531366_7 Helix-turn-helix domain - - - 0.000000000000000000000000000569 121.0
DYD3_k127_531366_8 DinB family - - - 0.00000000000000000003235 95.0
DYD3_k127_5318950_0 Methylenetetrahydrofolate reductase K00297,K00547,K00548 - 1.5.1.20,2.1.1.10,2.1.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006209 619.0
DYD3_k127_5318950_1 Sigma-54 interaction domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004448 400.0
DYD3_k127_5318950_10 RNA recognition motif - - - 0.000000000000000000000000002701 114.0
DYD3_k127_5318950_11 PFAM Vitamin B12 dependent methionine synthase, activation - - - 0.000000000000000000008722 107.0
DYD3_k127_5318950_12 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.0001036 50.0
DYD3_k127_5318950_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008228 381.0
DYD3_k127_5318950_3 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004922 316.0
DYD3_k127_5318950_4 Amidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 319.0
DYD3_k127_5318950_5 histidine kinase A domain protein K02482 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000002944 267.0
DYD3_k127_5318950_6 Methionine synthase B12-binding module cap domain protein K00548 - 2.1.1.13 0.00000000000000000000000000000000000000000000000000000000000000003412 244.0
DYD3_k127_5318950_7 Homocysteine S-methyltransferase K00548 - 2.1.1.13 0.0000000000000000000000000000000000000000000000000000000000000001362 241.0
DYD3_k127_5318950_8 Prokaryotic N-terminal methylation motif K02456 - - 0.00000000000000000000000000000000000006802 151.0
DYD3_k127_5318950_9 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.00000000000000000000000000000001355 135.0
DYD3_k127_532533_0 Gamma-glutamyltranspeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001732 546.0
DYD3_k127_532533_1 metal-dependent hydrolase with the TIM-barrel fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004765 258.0
DYD3_k127_532533_2 PFAM glutamine amidotransferase class-I K07010 - - 0.0000000000000000000000000000000000000000000000000000005119 201.0
DYD3_k127_532533_3 Enoyl-(Acyl carrier protein) reductase K03366 - 1.1.1.304,1.1.1.76 0.000000000000000000000000000000000000000000000000000002735 200.0
DYD3_k127_532533_4 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) K03594,K07052 - 1.16.3.1 0.00000000000000000000000000000000000000000000000014 195.0
DYD3_k127_5330377_0 Enoyl-CoA hydratase/isomerase K15866 - 5.3.3.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001529 284.0
DYD3_k127_5330377_1 Binding-protein-dependent transport system inner membrane component K02025,K10237,K15771 GO:0008150,GO:0040007,GO:0044110,GO:0044116,GO:0044117,GO:0044403,GO:0044419,GO:0051704 - 0.000000000000000000000000000000000000000000000000000000000000000000000001111 253.0
DYD3_k127_5330377_2 Binding-protein-dependent transport system inner membrane component K02026,K10238 - - 0.0000000000000000000000000000000000000000000000000000000000000002866 240.0
DYD3_k127_5330377_3 YbaK prolyl-tRNA synthetase associated region - - - 0.00000000000000000000000000000000000003713 151.0
DYD3_k127_5330377_4 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.000000000004779 71.0
DYD3_k127_5332923_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001558 396.0
DYD3_k127_5332923_2 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 0.0000000000000000496 87.0
DYD3_k127_5333351_0 Hydantoinase/oxoprolinase N-terminal region K01473 - 3.5.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003435 478.0
DYD3_k127_5333351_1 PFAM Hydantoinase B oxoprolinase K01474 - 3.5.2.14 0.0000000005121 64.0
DYD3_k127_5346072_0 Aminotransferase class-III K03918,K07250,K20428 - 2.6.1.19,2.6.1.22,2.6.1.33,2.6.1.36 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002557 331.0
DYD3_k127_5346072_1 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004732 303.0
DYD3_k127_5346072_2 AAA domain - - - 0.00000000000000000001935 93.0
DYD3_k127_5351188_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner - - - 7.681e-218 685.0
DYD3_k127_5351188_1 L,D-transpeptidase catalytic domain K21470 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006197 355.0
DYD3_k127_5351188_2 Bacterial protein of unknown function (DUF882) - - - 0.000000000000000000000000000000000000000000000000007206 187.0
DYD3_k127_5351188_3 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000004611 168.0
DYD3_k127_5351188_4 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000002999 137.0
DYD3_k127_5351188_5 Short repeat of unknown function (DUF308) - - - 0.00000000000000000000000000001056 126.0
DYD3_k127_5351188_6 PFAM CBS domain K04767 - - 0.0000000000000000000009323 103.0
DYD3_k127_5354739_0 Periplasmic binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 573.0
DYD3_k127_5354739_1 AMP-binding enzyme C-terminal domain K16876 - 6.2.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005746 432.0
DYD3_k127_5354739_2 COG0410 ABC-type branched-chain amino acid transport systems, ATPase component K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 391.0
DYD3_k127_5354739_3 Acyl-CoA dehydrogenase, C-terminal domain K11731 - - 0.00000000000000000000000001201 112.0
DYD3_k127_5354739_4 Belongs to the binding-protein-dependent transport system permease family - - - 0.00000000000000124 76.0
DYD3_k127_5363998_0 Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000001804 244.0
DYD3_k127_5374851_0 NMT1-like family K02051,K15576 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004375 553.0
DYD3_k127_5374851_1 Chalcone and stilbene synthases, C-terminal domain K16424 GO:0003674,GO:0003824,GO:0016740,GO:0016746,GO:0016747 2.3.1.246 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004327 389.0
DYD3_k127_5374851_10 SnoaL-like domain - - - 0.0004135 46.0
DYD3_k127_5374851_2 ATPases associated with a variety of cellular activities K15578 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007292 354.0
DYD3_k127_5374851_3 nitrate ABC transporter K02050,K15577 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003824 297.0
DYD3_k127_5374851_4 Bacterial transferase hexapeptide (six repeats) - GO:0003674,GO:0003824,GO:0004089,GO:0005488,GO:0008270,GO:0016829,GO:0016835,GO:0016836,GO:0043167,GO:0043168,GO:0043169,GO:0043199,GO:0046872,GO:0046914,GO:0050897,GO:0071890,GO:1901681 - 0.000000000000000000000000000000000000000000000000000000000000000000008571 239.0
DYD3_k127_5374851_5 Removes 5-oxoproline from various penultimate amino acid residues except L-proline K01304 GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0019538,GO:0043170,GO:0044238,GO:0071704,GO:1901564 3.4.19.3 0.000000000000000000000000000000000000007204 167.0
DYD3_k127_5374851_6 Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide K01725 - 4.2.1.104 0.0000000000000000000000000000002252 130.0
DYD3_k127_5374851_7 Pfam Family of - - - 0.00000000000000000000000000004621 123.0
DYD3_k127_5374851_8 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000202 118.0
DYD3_k127_5374851_9 Berberine and berberine like - - - 0.00000000000004866 77.0
DYD3_k127_5395393_0 Amino-transferase class IV K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002986 495.0
DYD3_k127_5395393_1 Dehydrogenase K00248,K11410,K18244 GO:0000062,GO:0000166,GO:0003674,GO:0003824,GO:0003995,GO:0004085,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005759,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0006950,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009605,GO:0009719,GO:0009725,GO:0009987,GO:0009991,GO:0010033,GO:0014070,GO:0016020,GO:0016042,GO:0016043,GO:0016054,GO:0016491,GO:0016627,GO:0017076,GO:0019395,GO:0019605,GO:0019626,GO:0019752,GO:0022607,GO:0030258,GO:0030554,GO:0031090,GO:0031667,GO:0031960,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0033218,GO:0033539,GO:0033993,GO:0034440,GO:0036094,GO:0042221,GO:0042594,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046359,GO:0046395,GO:0046459,GO:0048037,GO:0048545,GO:0050660,GO:0050662,GO:0050896,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0051384,GO:0052890,GO:0055114,GO:0065003,GO:0070013,GO:0071704,GO:0071840,GO:0072329,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901567,GO:1901575,GO:1901681 1.3.8.1,1.3.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001842 435.0
DYD3_k127_5395393_2 B12 binding domain K01849 - 5.4.99.2 0.0000000000000000000000000000000000000000000000000000407 209.0
DYD3_k127_5395393_3 Enoyl-CoA hydratase K16425 GO:0003674,GO:0003824,GO:0004300,GO:0016829,GO:0016835,GO:0016836 - 0.00000000000000000000000000000000000003769 164.0
DYD3_k127_5395393_4 Scavenger mRNA decapping enzyme C-term binding - - - 0.0000000000000000000000000000000000002568 144.0
DYD3_k127_5395393_5 PFAM Methylmalonyl-CoA mutase K01848 - 5.4.99.2 0.0000000000000000000000000000000002459 135.0
DYD3_k127_5413097_0 PFAM Hemerythrin HHE cation binding domain protein - - - 0.00000000000000000000000001475 115.0
DYD3_k127_5413097_1 integral membrane protein - - - 0.000000000000000000003924 106.0
DYD3_k127_5413097_2 PFAM Methyltransferase type - - - 0.00000000006976 74.0
DYD3_k127_5413097_3 amidohydrolase K07045 - - 0.000005945 49.0
DYD3_k127_5414992_0 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000001197 192.0
DYD3_k127_5414992_1 Winged helix DNA-binding domain K09927 - - 0.00000000000000000000000000000000000004614 153.0
DYD3_k127_5414992_2 Involved in the tonB-independent uptake of proteins K03641 - - 0.0000000000000000000000000001407 132.0
DYD3_k127_5414992_3 - - - - 0.00000000000000000000000009841 106.0
DYD3_k127_5414992_4 - - - - 0.0000000000000000000000836 104.0
DYD3_k127_5417204_0 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002884 556.0
DYD3_k127_5417204_1 Metal-dependent hydrolase - - - 0.0000000001942 63.0
DYD3_k127_5417204_2 LD-carboxypeptidase K01297 GO:0000270,GO:0003674,GO:0003824,GO:0004180,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006022,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0009050,GO:0009056,GO:0009254,GO:0009987,GO:0016787,GO:0019538,GO:0030203,GO:0034641,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 3.4.17.13 0.000001371 51.0
DYD3_k127_542265_0 Luciferase-like monooxygenase - - - 2.945e-209 655.0
DYD3_k127_542265_1 PFAM thiamine pyrophosphate enzyme-like TPP-binding thiamine pyrophosphate - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003853 327.0
DYD3_k127_542265_2 Glyoxalase-like domain - - - 0.00000000000000000000000000000000000000000000000000000009008 210.0
DYD3_k127_544697_0 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0000502,GO:0002020,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009376,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0019899,GO:0019904,GO:0030163,GO:0030164,GO:0030312,GO:0030554,GO:0031333,GO:0031597,GO:0032271,GO:0032272,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0040007,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043254,GO:0043335,GO:0044087,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051301,GO:0051704,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0097718,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1904949,GO:1905368,GO:1905369 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001978 547.0
DYD3_k127_544697_1 - K12065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002895 377.0
DYD3_k127_544697_2 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007746 359.0
DYD3_k127_544697_3 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000001074 276.0
DYD3_k127_544697_4 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000487 156.0
DYD3_k127_544697_5 FMN binding K03612 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000001095 109.0
DYD3_k127_544697_6 - - - - 0.000000000000000001875 98.0
DYD3_k127_544697_8 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.00000002594 57.0
DYD3_k127_5450504_0 gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 3.25e-273 854.0
DYD3_k127_5450504_1 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002723 373.0
DYD3_k127_5450504_2 FR47-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000009558 256.0
DYD3_k127_5450504_3 myo-inosose-2 dehydratase activity K00457,K06606 - 1.13.11.27,5.3.99.11 0.000000000000000000000000000000000000000000000000000000000000000005558 234.0
DYD3_k127_5450504_4 sequence-specific DNA binding - - - 0.0000000000000000000000000000000000000003257 156.0
DYD3_k127_5450504_5 sequence-specific DNA binding - - - 0.00000000000000000000000000000003483 126.0
DYD3_k127_5450504_6 racemase activity, acting on amino acids and derivatives - - - 0.00000000000000000005375 90.0
DYD3_k127_5450754_0 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 4.163e-199 649.0
DYD3_k127_5450754_1 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002365 510.0
DYD3_k127_5450754_2 Protein of unknown function (DUF917) K09703 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002229 498.0
DYD3_k127_5450754_3 Redoxin K03564 - 1.11.1.15 0.0000000000000000000000000000000000004715 141.0
DYD3_k127_5450754_4 Trypsin-like peptidase domain - - - 0.0000000000000000000000000000000000009698 155.0
DYD3_k127_5450754_5 COG0694 Thioredoxin-like proteins and domains - - - 0.0000000000000000000000000000143 120.0
DYD3_k127_5450754_6 Redoxin K03564 - 1.11.1.15 0.00000000000001905 74.0
DYD3_k127_5450754_7 COG0457 FOG TPR repeat - - - 0.00000000003237 66.0
DYD3_k127_545200_0 Thiamine pyrophosphate enzyme, central domain - - - 5.089e-203 647.0
DYD3_k127_545200_1 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002189 526.0
DYD3_k127_545200_2 peptidase M20 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004248 419.0
DYD3_k127_545200_3 GDSL-like Lipase/Acylhydrolase family - - - 0.0000000000000000000000000000000000000000000000000000008343 213.0
DYD3_k127_545200_4 GDSL-like Lipase/Acylhydrolase family - - - 0.0000000000000000000000000000000000000000005522 169.0
DYD3_k127_545200_5 OpgC protein - - - 0.00000002468 57.0
DYD3_k127_545200_6 BON domain K04065 - - 0.00001216 59.0
DYD3_k127_5478808_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 4.172e-264 835.0
DYD3_k127_5478808_1 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.000000000000000000000000000000000000000000000000000000000000173 214.0
DYD3_k127_5492395_0 Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively K06215 - 4.3.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 440.0
DYD3_k127_5492395_1 PFAM extracellular solute-binding protein family 5 K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001338 366.0
DYD3_k127_5492395_10 SnoaL-like domain - - - 0.00000000000000000000000009099 112.0
DYD3_k127_5492395_11 - - - - 0.00000001316 64.0
DYD3_k127_5492395_12 PFAM blue (type 1) copper domain protein K00368 - 1.7.2.1 0.00000001594 59.0
DYD3_k127_5492395_2 Alanine-glyoxylate amino-transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001238 349.0
DYD3_k127_5492395_3 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K01739 - 2.5.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006585 335.0
DYD3_k127_5492395_4 COGs COG1670 Acetyltransferase including N-acetylase of ribosomal protein - - - 0.0000000000000000000000000000000000000000000000000000000004424 223.0
DYD3_k127_5492395_5 Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS K08681 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0032991,GO:0034641,GO:0042364,GO:0042802,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046184,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617,GO:1902494,GO:1903600 4.3.3.6 0.00000000000000000000000000000000000000000000000000002509 202.0
DYD3_k127_5492395_6 peroxiredoxin activity K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000131 206.0
DYD3_k127_5492395_7 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000003035 191.0
DYD3_k127_5492395_8 molybdenum ion binding K07140 - - 0.000000000000000000000000000000000000000000000007447 174.0
DYD3_k127_5492395_9 Smr domain - - - 0.0000000000000000000000000000008752 124.0
DYD3_k127_5545770_0 Molybdopterin oxidoreductase Fe4S4 domain K00123,K22341 - 1.17.1.11,1.17.1.9 1.092e-243 781.0
DYD3_k127_5545770_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00122,K00335,K17992 - 1.12.1.3,1.17.1.9,1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009569 452.0
DYD3_k127_5545770_2 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001499 395.0
DYD3_k127_5545770_3 Putative glycosyl hydrolase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 379.0
DYD3_k127_5545770_4 Citrate synthase, C-terminal domain K01647 - 2.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 354.0
DYD3_k127_5545770_5 Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000002379 249.0
DYD3_k127_5545770_6 PFAM alpha beta hydrolase - - - 0.0000000000000000000000000000000000003032 158.0
DYD3_k127_5545770_7 Helix-turn-helix domain - - - 0.0000000000000000000003152 99.0
DYD3_k127_5557557_0 Acyl-CoA dehydrogenase, C-terminal domain K22027 - 1.14.13.235 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002926 376.0
DYD3_k127_5557557_1 Phosphatidylinositol - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004664 256.0
DYD3_k127_5557557_2 Histidine phosphatase superfamily (branch 1) - - - 0.00000000000000000000000000000000000000000000000000000000000000000004377 237.0
DYD3_k127_5557557_3 von Willebrand factor (vWF) type A domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000002734 232.0
DYD3_k127_5557557_4 Protein of unknown function (DUF3090) - - - 0.000000000000000000000000000002453 138.0
DYD3_k127_5603926_0 VWA domain containing CoxE-like protein K07161 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002476 308.0
DYD3_k127_5603926_1 Associated with various cellular activities - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000272 271.0
DYD3_k127_5603926_2 Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family K07402 - - 0.0000000000000000000000000000000000000000000000000000001542 216.0
DYD3_k127_5603926_3 MobA-like NTP transferase domain K07141 - 2.7.7.76 0.00000000000000000000000000000000000000004944 158.0
DYD3_k127_5603926_4 xanthine dehydrogenase activity K03519 - 1.2.5.3 0.0000000000000000000000000000000009395 134.0
DYD3_k127_56156_0 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K03385 - 1.7.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002487 539.0
DYD3_k127_56156_1 COG3005 Nitrate TMAO K15876 - - 0.0000000000000000000000000000000000000000000005256 178.0
DYD3_k127_56156_2 PFAM CBS domain K04767 - - 0.00000000000000000000000000000001454 135.0
DYD3_k127_56156_3 PFAM CBS domain K04767 - - 0.00000000000000000000000000000002602 134.0
DYD3_k127_56156_4 Universal stress protein - - - 0.000000000000000000004339 100.0
DYD3_k127_56156_5 AMP binding - - - 0.00003361 53.0
DYD3_k127_56156_6 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.00009197 52.0
DYD3_k127_5624083_0 Belongs to the ClpA ClpB family K03695,K03696 - - 3.69e-318 995.0
DYD3_k127_5624083_1 Surface antigen K07277 GO:0005575,GO:0005623,GO:0008104,GO:0008150,GO:0009279,GO:0009987,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032991,GO:0033036,GO:0034613,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044425,GO:0044462,GO:0044464,GO:0045184,GO:0045229,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0061024,GO:0070727,GO:0071709,GO:0071840,GO:0071944,GO:0072657,GO:0090150,GO:0098552,GO:0098796,GO:1990063 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001852 488.0
DYD3_k127_5624083_2 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003989 307.0
DYD3_k127_5624083_3 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003483 290.0
DYD3_k127_5624083_4 inositol 2-dehydrogenase activity K09949 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004561 290.0
DYD3_k127_5624083_5 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.00000000000000000000000000000000000000000000000000000000000000000004953 253.0
DYD3_k127_5624083_6 Domain of unknown function (DUF374) K09778 - - 0.0000000000000000000000000000000000001001 161.0
DYD3_k127_5624083_7 Psort location Cytoplasmic, score 8.96 K09949 - - 0.00000000000000000000000000000000954 147.0
DYD3_k127_5624083_8 Outer membrane protein (OmpH-like) K06142 - - 0.0000000000000000000002826 103.0
DYD3_k127_5624083_9 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.000000000000000005012 92.0
DYD3_k127_5630420_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 4.231e-249 780.0
DYD3_k127_5630420_1 Memo-like protein K06990 - - 0.000000000000000000000000000000000000002321 164.0
DYD3_k127_5631632_0 glucose-6-phosphate isomerase activity K01810 - 5.3.1.9 1.075e-251 806.0
DYD3_k127_5631632_1 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007383 591.0
DYD3_k127_5631632_10 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.00000000000004102 76.0
DYD3_k127_5631632_11 very-long-chain-acyl-CoA dehydrogenase activity - - - 0.000000000001452 76.0
DYD3_k127_5631632_2 Amidase K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004861 520.0
DYD3_k127_5631632_3 6-phosphogluconate dehydrogenase, C-terminal domain K00033 - 1.1.1.343,1.1.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 492.0
DYD3_k127_5631632_4 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005264 373.0
DYD3_k127_5631632_5 serine-type endopeptidase activity K01358 - 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002882 303.0
DYD3_k127_5631632_6 PFAM Haloacid dehalogenase domain protein hydrolase K01560,K07025 - 3.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000005296 269.0
DYD3_k127_5631632_7 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000008161 239.0
DYD3_k127_5631632_8 PFAM hexokinase K00844 - 2.7.1.1 0.000000000000000000000000000000000000000000000000007439 197.0
DYD3_k127_5631632_9 Yqey-like protein K09117 - - 0.0000000000000000000000000000000000000000000000005716 181.0
DYD3_k127_563583_0 PFAM Aminotransferase class I and II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001782 486.0
DYD3_k127_563583_1 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000002753 233.0
DYD3_k127_563583_2 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000003122 192.0
DYD3_k127_563583_3 PFAM histidine triad (HIT) protein - - - 0.00000000000000000000000000000002344 143.0
DYD3_k127_563583_4 COGs COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family - - - 0.000000000000000001371 101.0
DYD3_k127_5647615_0 Glutamate synthase central domain K00265,K00284 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006541,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0015930,GO:0016020,GO:0016053,GO:0016491,GO:0016638,GO:0019676,GO:0019740,GO:0019752,GO:0040007,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.13,1.4.1.14,1.4.7.1 8.362e-255 795.0
DYD3_k127_5647615_1 ferredoxin oxidoreductase K00174 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0030312,GO:0044464,GO:0050896,GO:0055114,GO:0071944 1.2.7.11,1.2.7.3 2.218e-202 642.0
DYD3_k127_5647615_2 Glutamate synthase central domain K00265,K00284 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006541,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0015930,GO:0016020,GO:0016053,GO:0016491,GO:0016638,GO:0019676,GO:0019740,GO:0019752,GO:0040007,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.13,1.4.1.14,1.4.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003547 491.0
DYD3_k127_5647615_3 Metallopeptidase family M24 K01262,K01271 - 3.4.11.9,3.4.13.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001812 410.0
DYD3_k127_5647615_4 COG0583 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008315 264.0
DYD3_k127_5653337_0 Pyruvate ferredoxin/flavodoxin oxidoreductase K04090 - 1.2.7.8 1.31e-287 905.0
DYD3_k127_5653337_1 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04565 - 1.15.1.1 0.00003106 49.0
DYD3_k127_5660320_0 COG1593 TRAP-type C4-dicarboxylate transport system, large permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 419.0
DYD3_k127_5660320_1 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002188 286.0
DYD3_k127_5660320_2 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000001328 257.0
DYD3_k127_5660320_3 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component - - - 0.0000000000000000000000000000000000000000000000000000000000000000006439 242.0
DYD3_k127_5660320_4 Amidohydrolase - - - 0.0000000000000000000000000000000000001732 152.0
DYD3_k127_5660320_5 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000003028 82.0
DYD3_k127_5665980_0 PFAM AMP-dependent synthetase and ligase K00666 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002683 557.0
DYD3_k127_5665980_1 PFAM Formylglycine-generating sulfatase enzyme K18912,K20333 - 1.14.99.50 0.0000000000000000000000000000000000000000000007287 178.0
DYD3_k127_5665980_2 Class II Aldolase and Adducin N-terminal domain - - - 0.00001053 49.0
DYD3_k127_5666247_0 metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain K01872,K07050 - 6.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006578 330.0
DYD3_k127_5666247_1 regulatory protein LysR - - - 0.000000000000000000000000000000000000000000000000005398 196.0
DYD3_k127_5666247_2 Antibiotic biosynthesis monooxygenase - - - 0.00000000000002662 80.0
DYD3_k127_5687267_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 GO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.5 0.0 1083.0
DYD3_k127_5687267_1 Elongation factor SelB winged helix K03833 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000686 589.0
DYD3_k127_5687267_10 gag-polyprotein putative aspartyl protease - - - 0.0000000000000008891 92.0
DYD3_k127_5687267_11 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000007037 64.0
DYD3_k127_5687267_12 PFAM thiamineS protein - - - 0.000000003938 64.0
DYD3_k127_5687267_13 Carboxymuconolactone decarboxylase family - - - 0.0000000688 62.0
DYD3_k127_5687267_14 Protein of unknown function (DUF2723) - - - 0.000001967 53.0
DYD3_k127_5687267_2 Phosphate transporter family K03306 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004227 458.0
DYD3_k127_5687267_3 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 GO:0003674,GO:0003824,GO:0004125,GO:0006139,GO:0006399,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016740,GO:0016785,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034654,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097056,GO:0140098,GO:0140101,GO:1901360,GO:1901362,GO:1901576 2.9.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 438.0
DYD3_k127_5687267_4 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006335 379.0
DYD3_k127_5687267_5 Lytic transglycosylase catalytic K08307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005529 257.0
DYD3_k127_5687267_6 Protein of unknown function DUF47 K02039,K07220 - - 0.00000000000000000000000000000000000000000000000000000000001057 214.0
DYD3_k127_5687267_7 Lipid A biosynthesis K02517 - 2.3.1.241 0.000000000000000000000000000000000000000000000000000000001013 224.0
DYD3_k127_5687267_8 Protein of unknown function (DUF3105) - - - 0.00000000000000000000000000000000000000000000001365 178.0
DYD3_k127_5687267_9 ATP hydrolysis coupled proton transport - - - 0.000000000000000000000000000000000000002533 169.0
DYD3_k127_5692406_0 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007444 380.0
DYD3_k127_5692406_1 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464 2.1.1.297 0.0000000000000000000000000000000000000000000000000000008135 210.0
DYD3_k127_5692406_2 Binds the 23S rRNA K02909 - - 0.000000000000000000000001011 104.0
DYD3_k127_5692406_3 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.00000000000002628 76.0
DYD3_k127_5692406_4 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.00000002045 55.0
DYD3_k127_569461_0 permease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003697 266.0
DYD3_k127_569461_1 - - - - 0.00000000000000000000000000000000000000000000008581 178.0
DYD3_k127_569461_2 Belongs to the peptidase S51 family K05995 GO:0003674,GO:0003824,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0071704,GO:0140096,GO:1901564 3.4.13.21 0.0000000000000000000000000000000000000000005819 165.0
DYD3_k127_569461_3 COG0861 Membrane protein TerC possibly involved in tellurium - - - 0.00000000000000000000000000000000000008726 144.0
DYD3_k127_569461_4 Haloacid dehalogenase-like hydrolase K01101 - 3.1.3.41 0.0000000000000000000000000000000000002031 152.0
DYD3_k127_5703462_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009429 452.0
DYD3_k127_5703462_1 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000001547 155.0
DYD3_k127_5703462_2 - - - - 0.00000000000000000000000000000001627 130.0
DYD3_k127_5703462_3 N-terminal half of MaoC dehydratase K09709 - 4.2.1.153 0.0000000000000000000000000434 109.0
DYD3_k127_5716134_0 PFAM ABC transporter K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000113 284.0
DYD3_k127_5716134_1 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006177 254.0
DYD3_k127_5716134_2 Histidine kinase-like ATPases - - - 0.00000000000000000000000000000000000000000000000000000000000006149 246.0
DYD3_k127_5716134_3 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000006512 132.0
DYD3_k127_5716134_4 PhoQ Sensor K21009 - - 0.000000000000000000000000000001059 143.0
DYD3_k127_5729590_0 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002448 358.0
DYD3_k127_5729590_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000000000000000000000003384 145.0
DYD3_k127_5729590_2 Transcriptional regulatory protein, C terminal K07670 GO:0005575,GO:0005623,GO:0005886,GO:0006355,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016020,GO:0016310,GO:0019219,GO:0019222,GO:0019538,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0044110,GO:0044116,GO:0044117,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044403,GO:0044419,GO:0044464,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051704,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:1901564,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 - 0.00000000000000003267 94.0
DYD3_k127_5747430_0 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K01876,K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.12,6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004269 582.0
DYD3_k127_5747430_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 GO:0008150,GO:0040007 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005506 387.0
DYD3_k127_5747430_2 TIGRFAM Cell division ATP-binding protein FtsE K09812 - - 0.00000000000000000000000000000000000000000000000000000000000004007 220.0
DYD3_k127_5747430_3 Belongs to the ABC-4 integral membrane protein family. FtsX subfamily K09811,K09812 GO:0000910,GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0006928,GO:0007049,GO:0007154,GO:0007165,GO:0007166,GO:0008150,GO:0008356,GO:0009274,GO:0009276,GO:0009605,GO:0009607,GO:0009615,GO:0009966,GO:0009987,GO:0010033,GO:0010646,GO:0016020,GO:0016021,GO:0016043,GO:0019221,GO:0022402,GO:0022603,GO:0022607,GO:0023051,GO:0023052,GO:0030312,GO:0030313,GO:0031224,GO:0031226,GO:0031975,GO:0032153,GO:0032506,GO:0034097,GO:0040007,GO:0040011,GO:0042173,GO:0042221,GO:0043207,GO:0043937,GO:0043938,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0045595,GO:0045597,GO:0045881,GO:0048518,GO:0048522,GO:0048583,GO:0048870,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051179,GO:0051301,GO:0051674,GO:0051704,GO:0051707,GO:0051716,GO:0065007,GO:0070098,GO:0070297,GO:0070887,GO:0071310,GO:0071345,GO:0071840,GO:0071944,GO:0071976,GO:0090529,GO:1902531 - 0.0000000000000000000000000000000002121 145.0
DYD3_k127_5747430_4 NLP P60 protein K21471 - - 0.0003992 52.0
DYD3_k127_5762267_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.0 1050.0
DYD3_k127_5762267_1 DNA polymerase K02337 GO:0003674,GO:0003824,GO:0003887,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032991,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044776,GO:0046483,GO:0061695,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 2.34e-292 910.0
DYD3_k127_5762267_2 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 7.868e-202 641.0
DYD3_k127_5762267_3 IMP dehydrogenase / GMP reductase domain K00088 - 1.1.1.205 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001825 511.0
DYD3_k127_5762267_4 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001038 282.0
DYD3_k127_5762267_5 Biotin/lipoate A/B protein ligase family K03524 - 6.3.4.15 0.0000000000000000000000000000000000000001545 164.0
DYD3_k127_5771222_0 Flavoprotein involved in K transport K03379 - 1.14.13.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002603 574.0
DYD3_k127_5771222_1 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001415 243.0
DYD3_k127_5771222_2 Virulence factor BrkB K07058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000441 244.0
DYD3_k127_5785152_0 Hydantoinase/oxoprolinase - - - 2.72e-267 840.0
DYD3_k127_5785152_1 N-methylhydantoinase A acetone carboxylase, beta subunit K01473 - 3.5.2.14 5.407e-240 759.0
DYD3_k127_5785152_2 Sulfate permease family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005882 478.0
DYD3_k127_5785152_3 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K00666 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006368 343.0
DYD3_k127_5785152_4 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides - - - 0.000000000000000000000000000000000000000148 159.0
DYD3_k127_5785152_5 F420H(2)-dependent quinone reductase - - - 0.0000000000000000000000000000000000000002535 157.0
DYD3_k127_5785152_6 PFAM FecR protein - - - 0.0000001418 61.0
DYD3_k127_5800269_0 FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000006823 141.0
DYD3_k127_5801680_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000001973 186.0
DYD3_k127_5801680_1 Bacterial transcriptional repressor C-terminal - - - 0.000000000000000000000000000000000000000000002395 173.0
DYD3_k127_5801680_2 PFAM Proprotein convertase P-domain - - - 0.00000000000000000008035 95.0
DYD3_k127_5801680_3 - - - - 0.000000000000000000113 99.0
DYD3_k127_580650_0 Transketolase, pyridine binding domain protein K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007956 312.0
DYD3_k127_580650_1 PFAM Transketolase K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000004832 210.0
DYD3_k127_580650_2 PFAM Dimethylmenaquinone methyltransferase - - - 0.0000000000000000000000000000000000000001099 153.0
DYD3_k127_580650_3 Predicted membrane protein (DUF2214) K08983 - - 0.000000000000000000000000000000000002507 144.0
DYD3_k127_5816244_0 Amidase - - - 4.791e-197 625.0
DYD3_k127_5816244_1 ADP-glyceromanno-heptose 6-epimerase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000005673 229.0
DYD3_k127_5816244_2 transcriptional regulator K07734 - - 0.0000000000000000000000000000000000000000000000000000003485 200.0
DYD3_k127_5816244_3 Enoyl-CoA hydratase - - - 0.00000000000000000000000000000000000000000000000005946 189.0
DYD3_k127_5816244_4 Protein of unknown function (DUF541) K09807 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.000000000000000000000000000000000000009132 154.0
DYD3_k127_5816244_5 signal-transduction protein containing cAMP-binding and CBS domains K02000,K05847 - 3.6.3.32 0.0000004591 56.0
DYD3_k127_5847465_0 Domain of unknown function (DUF3492) K21011 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000174 453.0
DYD3_k127_5847465_1 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02010,K11072 - 3.6.3.30,3.6.3.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008025 307.0
DYD3_k127_5847465_2 Putative exopolysaccharide Exporter (EPS-E) K21012 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009593 283.0
DYD3_k127_5847465_3 Enoyl-CoA hydratase/isomerase - - - 0.00000000000000000000000000000000000000000000001006 186.0
DYD3_k127_5847465_4 Rhodanese Homology Domain - - - 0.0000000000000000000000101 104.0
DYD3_k127_5847465_5 hydrolase (HAD superfamily) K07025 - - 0.0000000000000000000001512 111.0
DYD3_k127_5876828_0 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K00666,K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004441 401.0
DYD3_k127_5876828_1 helix_turn_helix gluconate operon transcriptional repressor K00375 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000026 376.0
DYD3_k127_5876828_2 PAC2 family - - - 0.00000000000000000000000000000000000000000000009761 181.0
DYD3_k127_5876828_3 EVE domain - - - 0.000000000002084 67.0
DYD3_k127_5886824_0 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K01848 - 5.4.99.2 4.88e-213 670.0
DYD3_k127_5886824_1 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008717 559.0
DYD3_k127_5886824_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004014 254.0
DYD3_k127_5886824_3 B12 binding domain K20907 - 5.4.99.64 0.000000000000000000000000000000000000000000000000004192 184.0
DYD3_k127_5937476_0 ABC-type uncharacterized transport system K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002552 349.0
DYD3_k127_5937476_1 Domain of unknown function (DUF4340) - - - 0.000000000000000000000000000000000000000000000000000000000000000001246 249.0
DYD3_k127_5937476_2 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000002512 232.0
DYD3_k127_5937476_3 Metallo-beta-lactamase superfamily K01069 GO:0003674,GO:0003824,GO:0004416,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006082,GO:0006090,GO:0006518,GO:0006575,GO:0006749,GO:0006750,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016787,GO:0016788,GO:0016790,GO:0019184,GO:0019752,GO:0031974,GO:0032787,GO:0034641,GO:0042398,GO:0043043,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0051186,GO:0051188,GO:0070013,GO:0071704,GO:1901564,GO:1901566,GO:1901576 3.1.2.6 0.00000000000000000000000000000072 131.0
DYD3_k127_5945857_0 Transglutaminase-like superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000707 224.0
DYD3_k127_5945857_1 Belongs to the Dps family K04047 - - 0.0000000000000000000000000000000000000000000000000000001045 199.0
DYD3_k127_5953110_0 PFAM Extracellular ligand-binding receptor K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000057 435.0
DYD3_k127_5953110_1 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000000000000000001794 267.0
DYD3_k127_5953110_2 SMART Tetratricopeptide domain protein - - - 0.000000001731 70.0
DYD3_k127_5954025_0 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 2.579e-196 630.0
DYD3_k127_5954025_1 Oxidoreductase family, NAD-binding Rossmann fold K10219 - 1.1.1.312 0.00000000000000000000000000000000000000000000000004243 184.0
DYD3_k127_5961832_0 Amino-transferase class IV - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 417.0
DYD3_k127_5961832_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 388.0
DYD3_k127_5961832_10 aldo-keto reductase (NADP) activity - - - 0.000001799 60.0
DYD3_k127_5961832_2 zinc ion binding K07048 GO:0008150,GO:0009888,GO:0009987,GO:0030154,GO:0030855,GO:0032502,GO:0048856,GO:0048869,GO:0060429 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003215 306.0
DYD3_k127_5961832_3 aldo-keto reductase (NADP) activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009202 303.0
DYD3_k127_5961832_4 Alpha beta hydrolase K14731 - 3.1.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001943 299.0
DYD3_k127_5961832_5 GlcNAc-PI de-N-acetylase - - - 0.0000000000000000000000000000000000000000000000000007297 194.0
DYD3_k127_5961832_6 methyltransferase - - - 0.000000000000000000000000000000000000000000000008839 183.0
DYD3_k127_5961832_7 NMT1-like family K02051 GO:0003674,GO:0005215 - 0.0000000000000000000000000000000000000000000002743 180.0
DYD3_k127_5961832_8 - - - - 0.0000000000000000000000000000000000413 139.0
DYD3_k127_5961832_9 N-formylglutamate amidohydrolase K01458 - 3.5.1.68 0.00000000000000000004598 102.0
DYD3_k127_5962755_0 choline dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003305 383.0
DYD3_k127_5962755_1 Enoyl-(Acyl carrier protein) reductase K00034 - 1.1.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003382 366.0
DYD3_k127_5962755_2 cellular water homeostasis K03442,K22044 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006176 310.0
DYD3_k127_5962755_3 heme binding - - - 0.00000000000000000006358 90.0
DYD3_k127_5972095_0 Belongs to the CarA family K01956 GO:0000050,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005951,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0019627,GO:0019752,GO:0032991,GO:0034641,GO:0040007,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007294 516.0
DYD3_k127_5972095_1 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 GO:0003674,GO:0003824,GO:0004038,GO:0004151,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006145,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0040007,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046390,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002904 501.0
DYD3_k127_5972095_2 aspartate ornithine carbamoyltransferase, carbamoyl-P binding domain K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001619 411.0
DYD3_k127_5972095_3 Belongs to the purine pyrimidine phosphoribosyltransferase family. PyrR subfamily K02825 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000003869 226.0
DYD3_k127_5972095_4 SAM-dependent methyltransferase - - - 0.00000000000000000000000000000005213 138.0
DYD3_k127_5972095_5 PFAM Carbamoyl-phosphate synthase L chain, ATP binding domain K01955 GO:0000050,GO:0003674,GO:0003824,GO:0004087,GO:0004088,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016884,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.5.5 0.000000000000000000000000000001417 120.0
DYD3_k127_5972095_6 Belongs to the CarB family K01955 - 6.3.5.5 0.000000000003702 66.0
DYD3_k127_598169_0 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 6.257e-240 761.0
DYD3_k127_598169_1 dihydrolipoamide dehydrogenase K00382 - 1.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007802 449.0
DYD3_k127_598169_2 COG1960 Acyl-CoA dehydrogenases K19966 - 3.13.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 410.0
DYD3_k127_598169_3 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K00162,K00627 - 1.2.4.1,2.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000303 284.0
DYD3_k127_598169_4 PFAM Methylmalonyl-CoA mutase K01848 - 5.4.99.2 0.000000000000000000000000000006807 126.0
DYD3_k127_598169_5 Evidence 4 Homologs of previously reported genes of - - - 0.00000001429 64.0
DYD3_k127_5985612_0 Proline dehydrogenase K13821 - 1.2.1.88,1.5.5.2 0.0 1102.0
DYD3_k127_5985612_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 389.0
DYD3_k127_5985612_2 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 395.0
DYD3_k127_5985612_3 Alcohol dehydrogenase zinc-binding domain protein K13953,K18382 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000003954 261.0
DYD3_k127_5985612_4 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.000000000000000000000000000000000000000000000000006258 192.0
DYD3_k127_5985612_5 PFAM MaoC like domain - - - 0.00000000000000000000955 96.0
DYD3_k127_5985612_6 dehydratase - - - 0.0000000000006983 81.0
DYD3_k127_5985612_7 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.0000002177 61.0
DYD3_k127_5985612_8 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.00002591 50.0
DYD3_k127_602983_0 phosphorelay signal transduction system K02481 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001629 499.0
DYD3_k127_602983_1 Belongs to the D-glutamate cyclase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009639 360.0
DYD3_k127_602983_2 Aminotransferase class-III K01845 - 5.4.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 323.0
DYD3_k127_602983_3 Allophanate hydrolase subunit 2 K06350 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001137 294.0
DYD3_k127_602983_4 SNARE associated Golgi protein K03975 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001113 274.0
DYD3_k127_602983_5 Allophanate hydrolase subunit 1 K06351 - - 0.000000000000000000000000000000000000000000000000000000000000000000002355 244.0
DYD3_k127_602983_6 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000001397 236.0
DYD3_k127_602983_7 Mannose-6-phosphate isomerase K00971,K16011 - 2.7.7.13,5.3.1.8 0.00000000000000000000000000000000000000000000000000000000000002415 229.0
DYD3_k127_602983_8 CoA-binding domain protein - - - 0.000000000000001298 80.0
DYD3_k127_602983_9 His Kinase A (phosphoacceptor) domain - - - 0.00001372 55.0
DYD3_k127_6031947_0 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001791 398.0
DYD3_k127_6031947_1 HipA-like C-terminal domain K07154 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 344.0
DYD3_k127_6031947_2 COG1668 ABC-type Na efflux pump, permease component K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003084 337.0
DYD3_k127_6031947_3 PFAM Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000001066 190.0
DYD3_k127_6031947_4 CGNR zinc finger - - - 0.000000000000000009972 83.0
DYD3_k127_6031947_5 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0000000000001127 85.0
DYD3_k127_6031947_6 Helix-turn-helix XRE-family like proteins - - - 0.0000926 49.0
DYD3_k127_6031947_7 Lysylphosphatidylglycerol synthase TM region K07027,K20468 - - 0.0001991 51.0
DYD3_k127_6031947_8 ubiE/COQ5 methyltransferase family - - - 0.0009099 51.0
DYD3_k127_6045287_0 FHA domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 455.0
DYD3_k127_6045287_2 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.00000000000000000000000000000000000216 141.0
DYD3_k127_6056658_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 1.633e-239 755.0
DYD3_k127_6056658_1 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009037 297.0
DYD3_k127_6056658_2 Ami_3 K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000009888 238.0
DYD3_k127_6056658_3 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.0003676 45.0
DYD3_k127_6064396_0 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003347 448.0
DYD3_k127_6064396_1 Belongs to the HpcH HpaI aldolase family K02510 - 4.1.2.52 0.0000000000000000000000000000000000000000000000000000000000000000000006762 246.0
DYD3_k127_6064396_2 mannose-ethanolamine phosphotransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000007917 252.0
DYD3_k127_6064396_3 Aldo/keto reductase family K18471 - - 0.000000000000000000000000000000000000000000000000000000000000000003047 252.0
DYD3_k127_6064396_4 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0000000000000000000000000000000000000000000000000000000001004 228.0
DYD3_k127_6064396_5 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000000000000000000000000001018 198.0
DYD3_k127_6064396_6 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity K01607 - 4.1.1.44 0.00000000000000000000000000000004938 132.0
DYD3_k127_6064396_7 PFAM Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000002994 59.0
DYD3_k127_607786_0 Protein of unknown function (DUF4197) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001147 255.0
DYD3_k127_607786_1 Belongs to the formate--tetrahydrofolate ligase family K01938 - 6.3.4.3 0.0000000000000000000000000000000000000000000000000000000000000001198 225.0
DYD3_k127_607786_2 MFS_1 like family - - - 0.00000000000000000000000000000000000000000003988 179.0
DYD3_k127_607786_3 ATPase which is responsible for recognizing, binding, unfolding and translocation of substrate proteins into the archaeal 20S proteasome core particle. Is essential for opening the gate of the 20S proteasome via an interaction with its C- terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. Unfolding activity requires energy from ATP hydrolysis, whereas ATP binding alone promotes ATPase-20S proteasome association which triggers gate opening, and supports translocation of unfolded substrates K03420 - - 0.00000000000000000000000000000000000000001746 167.0
DYD3_k127_607786_4 PFAM thioesterase superfamily K07107 - - 0.0000000000000000000000000004328 119.0
DYD3_k127_607786_5 Bifunctional nuclease K03617,K08999 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.000000000000000000000000006171 118.0
DYD3_k127_607786_6 Sigma-70 region 2 K03088 - - 0.000000000000005082 76.0
DYD3_k127_6079193_0 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002 559.0
DYD3_k127_6079193_1 TIGRFAM Hopanoid biosynthesis associated radical SAM protein HpnH - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 520.0
DYD3_k127_6079193_10 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon K00992 - 2.7.7.99 0.0000000000000001016 94.0
DYD3_k127_6079193_11 Phosphorylase superfamily - - - 0.0000000003253 71.0
DYD3_k127_6079193_12 Psort location CytoplasmicMembrane, score 10.00 - - - 0.00000009738 65.0
DYD3_k127_6079193_13 NmrA-like family K00091 - 1.1.1.219 0.000004848 57.0
DYD3_k127_6079193_2 Permease MlaE K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005545 315.0
DYD3_k127_6079193_3 MMPL family K07003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008442 334.0
DYD3_k127_6079193_4 PFAM ABC transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005121 265.0
DYD3_k127_6079193_5 Nucleotidyl transferase - - - 0.0000000000000000000000000000000000000000000000000000001616 205.0
DYD3_k127_6079193_6 intermembrane phospholipid transfer K07323 - - 0.0000000000000000000000000000000000000000000000000000008499 201.0
DYD3_k127_6079193_7 MlaD protein K02067 - - 0.000000000000000000000000000000000000000000000000002819 187.0
DYD3_k127_6079193_8 Carotenoid biosynthesis protein - - - 0.0000000000000000000000000000000000000000000003175 177.0
DYD3_k127_6079193_9 - - - - 0.00000000000000000000001961 103.0
DYD3_k127_6096089_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004642,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0017076,GO:0018130,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.5.3 2.074e-257 813.0
DYD3_k127_6096089_1 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009507,GO:0009536,GO:0040007,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464 2.4.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 610.0
DYD3_k127_6096089_2 PFAM AIR synthase related protein K01933 - 6.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000406 383.0
DYD3_k127_6096089_3 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 GO:0003674,GO:0003824,GO:0004644,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0016740,GO:0016741,GO:0016742,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716 2.1.2.2 0.000000000000000000000000000001146 129.0
DYD3_k127_6096089_4 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 GO:0003674,GO:0003824,GO:0004642,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.5.3 0.00000003488 55.0
DYD3_k127_6096724_0 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003481 616.0
DYD3_k127_6096724_1 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001508 358.0
DYD3_k127_6096724_2 PAS fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003188 330.0
DYD3_k127_6096724_3 Dienelactone hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004546 282.0
DYD3_k127_6096724_4 COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III K00784 - 3.1.26.11 0.00000000000000000000000000000000000000000000000000000000000003636 226.0
DYD3_k127_6096724_6 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000001869 85.0
DYD3_k127_6096724_7 excinuclease ABC activity K03703 - - 0.00000000001697 75.0
DYD3_k127_6096724_8 Acid phosphatase homologues K19302 - 3.6.1.27 0.000000001796 62.0
DYD3_k127_6096724_9 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.00005963 48.0
DYD3_k127_6104802_0 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003701 505.0
DYD3_k127_6104802_1 Taurine catabolism dioxygenase TauD, TfdA family K03119 - 1.14.11.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001341 310.0
DYD3_k127_6104802_2 flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase K07006 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005336 262.0
DYD3_k127_6104802_3 regulatory protein, arsR - - - 0.000000000000000000000000000000000000000000000000003217 190.0
DYD3_k127_6104802_4 NIPSNAP - - - 0.0000000000000000000000000000002662 137.0
DYD3_k127_6104802_5 PFAM amidohydrolase 2 - - - 0.0000000000000000000001516 103.0
DYD3_k127_6137979_0 F420-dependent - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005251 381.0
DYD3_k127_6137979_1 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005142 262.0
DYD3_k127_6137979_2 Branched-chain amino acid transport system / permease component K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000004715 242.0
DYD3_k127_6137979_3 Periplasmic binding protein domain K01999 - - 0.00000000000000000000000000000000000000000000000000000003165 220.0
DYD3_k127_6156592_0 Glycosyl transferase, family 2 - - - 8.114e-314 983.0
DYD3_k127_6156592_1 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003992 437.0
DYD3_k127_6156592_2 response regulator receiver K02481,K07714,K10943 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001858 409.0
DYD3_k127_6156592_3 ubiE/COQ5 methyltransferase family K00570 - 2.1.1.17,2.1.1.71 0.00000000000000000000000000000000000000000000000000000000000000000000000000003019 266.0
DYD3_k127_6156592_4 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000000000000000000000000000000000000000000000000000005242 249.0
DYD3_k127_6156592_5 Molybdopterin converting factor subunit K03635,K21142 - 2.8.1.12 0.000000000000000000000000000000000000000000000000000000000001007 218.0
DYD3_k127_6156592_6 KR domain K00065 - 1.1.1.127 0.00000000000000000000000000000000000000007973 160.0
DYD3_k127_6156592_7 Belongs to the HesB IscA family K13628 - - 0.000000000000000000000000000009566 121.0
DYD3_k127_6156592_8 Alpha/beta hydrolase family - - - 0.000000000000000000000001453 116.0
DYD3_k127_6156592_9 ACT domain protein - - - 0.000000001272 67.0
DYD3_k127_6176050_0 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00015 - 1.1.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001783 380.0
DYD3_k127_6176050_1 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001416 257.0
DYD3_k127_619783_0 PFAM FAD linked oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002012 385.0
DYD3_k127_619783_1 UbiA prenyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009237 281.0
DYD3_k127_619783_2 UDP binding domain K02474,K13015 - 1.1.1.136 0.00000000000000000000000000000000000000000000000000000000000000000003525 237.0
DYD3_k127_619783_3 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.000003178 56.0
DYD3_k127_6213816_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657,K13503 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000005817 259.0
DYD3_k127_6213816_1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00042 - 1.1.1.60 0.000000000000000000000000000000000000000003702 172.0
DYD3_k127_6223327_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 1.047e-210 689.0
DYD3_k127_6223327_1 Belongs to the aldehyde dehydrogenase family K00128,K00138 - 1.2.1.3 3.208e-202 640.0
DYD3_k127_6223327_2 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM K03519 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000002576 223.0
DYD3_k127_6223327_3 [2Fe-2S] binding domain - - - 0.000000000000000000000000000000000000000000000003198 193.0
DYD3_k127_6223327_4 Pyridine nucleotide-disulphide oxidoreductase - - - 0.00000000000000000000000000000000000000000000004374 181.0
DYD3_k127_6227943_0 FMN-dependent dehydrogenase K00104 - 1.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000048 461.0
DYD3_k127_6227943_1 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000000000000003739 163.0
DYD3_k127_6227943_2 - - - - 0.000000009053 58.0
DYD3_k127_6229006_0 Receptor family ligand binding region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002552 440.0
DYD3_k127_6229006_1 Branched-chain amino acid transport system / permease component K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000268 373.0
DYD3_k127_6229006_2 Branched-chain amino acid transport system / permease component K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002313 335.0
DYD3_k127_6229006_3 ATPases associated with a variety of cellular activities K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003876 302.0
DYD3_k127_6229006_4 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007281 271.0
DYD3_k127_6229006_5 non-haem dioxygenase in morphine synthesis N-terminal - - - 0.0000000000000000000000000000000000000000000000000003293 193.0
DYD3_k127_6229006_6 GntR family - - - 0.000000000000000000000003094 111.0
DYD3_k127_6230927_0 Belongs to the 3-hydroxyisobutyrate dehydrogenase family K00020 - 1.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000001756 262.0
DYD3_k127_6230927_1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase - - - 0.000000000000000000000000000000000000000000000000007318 188.0
DYD3_k127_6230927_2 Domain of Unknown Function (DUF748) - - - 0.000000000000000000000000000000000000000000000006559 198.0
DYD3_k127_6230927_3 COG0318, Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II - - - 0.000000000000000001084 88.0
DYD3_k127_623833_0 RmuC family K09760 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001546 286.0
DYD3_k127_623833_1 Peptidase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000001784 241.0
DYD3_k127_623833_2 Protein of unknown function (DUF2400) - - - 0.0000000000000000000000000000000000000013 151.0
DYD3_k127_626551_0 Required for chromosome condensation and partitioning K03529 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003266 512.0
DYD3_k127_626551_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.000000000000000000000000000000000000000000000005277 181.0
DYD3_k127_626551_2 Helix-turn-helix domain - - - 0.0000000005671 68.0
DYD3_k127_6274336_0 Aminotransferase class-III K03918,K07250,K20428 - 2.6.1.19,2.6.1.22,2.6.1.33,2.6.1.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002263 607.0
DYD3_k127_6274336_1 Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase) K03802,K05844 - 6.3.2.29,6.3.2.30 0.00000000000000000000000000000000000000000000000000000000000000001762 241.0
DYD3_k127_6274336_2 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon K00966,K05305,K16881 - 2.7.1.52,2.7.7.13,5.4.2.8 0.0000000000000000000000000000000000000000000000001095 185.0
DYD3_k127_6278_0 Gaf domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000356 617.0
DYD3_k127_6278_1 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004324 269.0
DYD3_k127_6293686_0 Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005287 544.0
DYD3_k127_6293686_1 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001811 456.0
DYD3_k127_6293686_2 Belongs to the amidase family K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001958 456.0
DYD3_k127_6293686_3 Binding-protein-dependent transport system inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009807 360.0
DYD3_k127_6293686_4 carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000276 319.0
DYD3_k127_6293686_5 Binding-protein-dependent transport system inner membrane component K02033,K15585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000672 300.0
DYD3_k127_6293686_6 response regulator receiver K02667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002125 276.0
DYD3_k127_6293686_7 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04565 GO:0000302,GO:0000303,GO:0000305,GO:0003674,GO:0003824,GO:0004784,GO:0005488,GO:0005507,GO:0005575,GO:0005576,GO:0005615,GO:0005623,GO:0006801,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008270,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016721,GO:0019430,GO:0030288,GO:0030313,GO:0031975,GO:0033554,GO:0034599,GO:0034614,GO:0042221,GO:0042597,GO:0043167,GO:0043169,GO:0044237,GO:0044421,GO:0044464,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0071450,GO:0071451,GO:0072593,GO:0097237,GO:0098754,GO:0098869,GO:1901700,GO:1901701,GO:1990748 1.15.1.1 0.0000000000000000000000000000000000000000008581 163.0
DYD3_k127_6293686_8 amidohydrolase - - - 0.0000000000000000000000000000000000001627 163.0
DYD3_k127_6293686_9 PFAM ROSMUCR transcriptional regulator - - - 0.000000007313 64.0
DYD3_k127_6326870_0 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003055 576.0
DYD3_k127_6326870_1 Cytidylyltransferase-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 509.0
DYD3_k127_6326870_2 Cytidylyltransferase-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008516 493.0
DYD3_k127_6326870_3 UDP binding domain K00012 - 1.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001749 293.0
DYD3_k127_6326870_4 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004756 285.0
DYD3_k127_6326870_5 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000112 268.0
DYD3_k127_6326870_6 SIS domain K03271 - 5.3.1.28 0.000000000000000000000000000000000000000000000000000000009562 224.0
DYD3_k127_6326870_7 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.00000000000000000000000000000000000000000000000000001192 201.0
DYD3_k127_6326870_8 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.000000000000000000000000000000000000000000000000000162 201.0
DYD3_k127_6326870_9 Polynucleotide kinase 3 phosphatase K03273 - 3.1.3.82,3.1.3.83 0.00000000000000000000000000000000000000000004426 177.0
DYD3_k127_6337058_0 LUD domain K18929 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002615 484.0
DYD3_k127_6352390_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism K00990 - 2.7.7.59 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 639.0
DYD3_k127_6352390_1 Nitroreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002769 347.0
DYD3_k127_6352390_10 Pfam:Pyridox_oxidase - - - 0.00000000000000000000000000000000001501 141.0
DYD3_k127_6352390_11 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.00000000000000000000000000000000002257 141.0
DYD3_k127_6352390_13 - - - - 0.0000000000000167 80.0
DYD3_k127_6352390_14 Major Facilitator Superfamily - - - 0.0000168 52.0
DYD3_k127_6352390_2 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003112 302.0
DYD3_k127_6352390_3 Cupin domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001385 283.0
DYD3_k127_6352390_4 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001037 282.0
DYD3_k127_6352390_5 PFAM peptidase S58, DmpA K01266 - 3.4.11.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000001705 273.0
DYD3_k127_6352390_6 HD containing hydrolase-like enzyme K07023,K08722 - 3.1.3.89 0.000000000000000000000000000000000000000000000000000000000000000000001257 241.0
DYD3_k127_6352390_7 Metallo-beta-lactamase superfamily K06897 - 2.5.1.105 0.00000000000000000000000000000000000000000000000000000002113 217.0
DYD3_k127_6352390_8 RelE-like toxin of type II toxin-antitoxin system HigB K07334 - - 0.00000000000000000000000000000000000000002291 154.0
DYD3_k127_6352390_9 TIGRFAM addiction module antidote protein, HigA family K21498 - - 0.0000000000000000000000000000000000000001762 151.0
DYD3_k127_6353426_0 PFAM aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K03520 - 1.2.5.3 2.15e-203 642.0
DYD3_k127_6353426_1 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007377 461.0
DYD3_k127_6353426_2 alpha/beta hydrolase fold K01563,K22318 - 3.8.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 433.0
DYD3_k127_6353426_3 Glyoxalase-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 314.0
DYD3_k127_6353426_4 - - - - 0.0000002207 53.0
DYD3_k127_6395881_0 ABC transporter transmembrane region - - - 2.537e-260 824.0
DYD3_k127_6395881_1 Major Facilitator Superfamily - - - 2.392e-207 652.0
DYD3_k127_6395881_10 Adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.000000000000000000000000000001406 141.0
DYD3_k127_6395881_11 OsmC-like protein - - - 0.00000000000000000000000004793 114.0
DYD3_k127_6395881_12 PhoQ Sensor K19622 - - 0.0000000000000000000000001528 125.0
DYD3_k127_6395881_13 His Kinase A (phosphoacceptor) domain - - - 0.000002772 60.0
DYD3_k127_6395881_2 Glycosyl Transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005865 582.0
DYD3_k127_6395881_3 Two component, sigma54 specific, transcriptional regulator, Fis family K07714,K19641 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002223 429.0
DYD3_k127_6395881_4 NAD dependent epimerase/dehydratase family K00023,K00059 - 1.1.1.100,1.1.1.36 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 375.0
DYD3_k127_6395881_5 Histidine kinase K02482 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000001256 243.0
DYD3_k127_6395881_6 Dienelactone hydrolase family K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000005504 244.0
DYD3_k127_6395881_7 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.000000000000000000000000000000000000000001567 171.0
DYD3_k127_6395881_8 pfam rok K00845 - 2.7.1.2 0.0000000000000000000000000000000000000001743 171.0
DYD3_k127_6395881_9 Bacterial-like globin K06886 - - 0.00000000000000000000000000000000000001788 152.0
DYD3_k127_6399129_0 FAD dependent oxidoreductase K00109,K15736 - 1.1.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000978 464.0
DYD3_k127_6399129_1 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002462 365.0
DYD3_k127_6399129_2 histone H2A K63-linked ubiquitination K04771,K07003 - 3.4.21.107 0.00000000000000002483 96.0
DYD3_k127_6399129_3 helix_turn_helix, cAMP Regulatory protein K21564 - - 0.0000003187 61.0
DYD3_k127_6399129_4 SNARE associated Golgi protein - - - 0.000003462 50.0
DYD3_k127_6404509_0 leucyl-tRNA aminoacylation K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.0 1043.0
DYD3_k127_6404509_1 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 3.541e-220 694.0
DYD3_k127_6404509_10 DNA polymerase III delta subunit K02340 - 2.7.7.7 0.000000000000000000000000002974 125.0
DYD3_k127_6404509_11 Evidence 5 No homology to any previously reported sequences K03643 GO:0001530,GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006810,GO:0006869,GO:0008150,GO:0008289,GO:0009279,GO:0009987,GO:0010876,GO:0015920,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031975,GO:0033036,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044462,GO:0044464,GO:0045229,GO:0051179,GO:0051234,GO:0061024,GO:0071702,GO:0071709,GO:0071840,GO:0071944,GO:0097367,GO:1901264 - 0.000000000000000000000000004941 116.0
DYD3_k127_6404509_12 TIGRFAM lipopolysaccharide transport periplasmic protein LptA K09774 - - 0.000000000000000005664 97.0
DYD3_k127_6404509_13 Binds directly to 16S ribosomal RNA K02968 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0040007,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000001293 77.0
DYD3_k127_6404509_14 Lipopolysaccharide-assembly, LptC-related K09774,K11719 - - 0.00000006702 61.0
DYD3_k127_6404509_15 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.000001092 60.0
DYD3_k127_6404509_2 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005813 410.0
DYD3_k127_6404509_3 Belongs to the SIS family. GutQ KpsF subfamily K01627,K03281,K06041 - 2.5.1.55,5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002232 384.0
DYD3_k127_6404509_4 lipopolysaccharide transport protein B ATP-binding component of ABC superfamily K01990,K06861 GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015221,GO:0015399,GO:0015405,GO:0015437,GO:0015920,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0032991,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043190,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1901264,GO:1901505,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 342.0
DYD3_k127_6404509_5 Belongs to the KdsA family K01627 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005996,GO:0006082,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008676,GO:0009058,GO:0009059,GO:0009103,GO:0009987,GO:0016043,GO:0016051,GO:0016053,GO:0016740,GO:0016765,GO:0019294,GO:0019752,GO:0022607,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0046394,GO:0046400,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.5.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006906 355.0
DYD3_k127_6404509_6 Belongs to the 'phage' integrase family K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004383 263.0
DYD3_k127_6404509_7 Probable RNA and SrmB- binding site of polymerase A K00974 - 2.7.7.72 0.00000000000000000000000000000000000000000000000000000006722 220.0
DYD3_k127_6404509_8 TIGRFAM 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 - 3.1.3.45 0.00000000000000000000000000000000004439 153.0
DYD3_k127_6404509_9 Neutral/alkaline non-lysosomal ceramidase, N-terminal - - - 0.000000000000000000000000000001353 140.0
DYD3_k127_6435159_0 ABC-type multidrug transport system ATPase component K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002157 277.0
DYD3_k127_6435159_1 Amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000004803 201.0
DYD3_k127_6435159_2 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000006673 139.0
DYD3_k127_6439566_0 hopanoid biosynthesis associated radical SAM protein HpnJ - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003339 348.0
DYD3_k127_6439566_1 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000002396 211.0
DYD3_k127_6447452_0 N-terminal domain of (some) glycogen debranching enzymes - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005421 625.0
DYD3_k127_6447452_1 Glycosyl transferase 4-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 385.0
DYD3_k127_6447452_10 5'-3' exonuclease, N-terminal resolvase-like domain - - - 0.0000000000001665 77.0
DYD3_k127_6447452_11 Cupin domain - - - 0.0002683 53.0
DYD3_k127_6447452_2 PFAM Copper type II ascorbate-dependent monooxygenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001306 369.0
DYD3_k127_6447452_3 F420-dependent oxidoreductase, MSMEG_3544 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003935 295.0
DYD3_k127_6447452_4 AraC-like ligand binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009895 287.0
DYD3_k127_6447452_5 LysE type translocator - - - 0.000000000000000000000000000000000000000000000000000001365 198.0
DYD3_k127_6447452_6 methyltransferase - - - 0.0000000000000000000000000000000000000000000000001962 183.0
DYD3_k127_6447452_7 Hsp20/alpha crystallin family K13993 - - 0.0000000000000000000000000000000008277 136.0
DYD3_k127_6447452_8 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000000000000000002989 131.0
DYD3_k127_6447452_9 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000005183 87.0
DYD3_k127_6449929_0 Pyridoxal-dependent decarboxylase conserved domain K01634 - 4.1.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000368 394.0
DYD3_k127_6449929_1 PFAM FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002938 287.0
DYD3_k127_6449929_2 PFAM ABC transporter, transmembrane region K06147,K11085 - - 0.00000000000000000000000000000000000000000000000000005143 197.0
DYD3_k127_6449929_3 thiolester hydrolase activity K06889 - - 0.00000000000000000000000000000000000000000000000000507 190.0
DYD3_k127_6449929_4 PFAM glycine reductase complex selenoprotein A K10670 - 1.21.4.2,1.21.4.3,1.21.4.4 0.00000000000000000000000001154 112.0
DYD3_k127_6449929_5 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.000000000791 66.0
DYD3_k127_6449929_6 Glycine reductase complex selenoprotein A K10670 - 1.21.4.2,1.21.4.3,1.21.4.4 0.00000002248 56.0
DYD3_k127_6452689_0 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003723 302.0
DYD3_k127_6452689_1 COG0477 Permeases of the major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002606 282.0
DYD3_k127_6452689_2 HAMP domain K02482 - 2.7.13.3 0.0000000000000000000000000000000000000000000000007696 192.0
DYD3_k127_6452689_3 - - - - 0.00000000000000000000000000000000000000000001648 172.0
DYD3_k127_6452689_4 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.00000000000007439 73.0
DYD3_k127_6463898_0 Asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008585 423.0
DYD3_k127_6463898_1 short-chain dehydrogenase reductase SDR K12454 - 5.1.3.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008633 388.0
DYD3_k127_6463898_10 PFAM Glycosyl transferase family 2 K00721 - 2.4.1.83 0.000000000000000000000000008724 126.0
DYD3_k127_6463898_11 Psort location CytoplasmicMembrane, score - - - 0.0000000001209 75.0
DYD3_k127_6463898_2 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009309 332.0
DYD3_k127_6463898_3 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000424 284.0
DYD3_k127_6463898_4 Methyltransferase domain K00568 - 2.1.1.222,2.1.1.64 0.0000000000000000000000000000000000000000000000000000000000002227 224.0
DYD3_k127_6463898_5 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000001522 218.0
DYD3_k127_6463898_6 PFAM Fatty acid desaturase K00507 - 1.14.19.1 0.00000000000000000000000000000000000000000000000000005697 207.0
DYD3_k127_6463898_7 Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid K18235 - - 0.000000000000000000000000000000000000000000000000001301 196.0
DYD3_k127_6463898_8 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000002475 179.0
DYD3_k127_6463898_9 rRNA (adenine-N6,N6-)-dimethyltransferase activity K02528,K20444 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 0.000000000000000000000000004845 128.0
DYD3_k127_6471160_0 Evidence 5 No homology to any previously reported sequences - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001798 418.0
DYD3_k127_6471160_1 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000253 400.0
DYD3_k127_6471160_2 peptidase dimerisation domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 319.0
DYD3_k127_6471160_3 Belongs to the MIP aquaporin (TC 1.A.8) family K06188 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 321.0
DYD3_k127_6471160_4 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K00851,K00852,K01807 GO:0003674,GO:0003824,GO:0004751,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006014,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009052,GO:0009117,GO:0009987,GO:0016853,GO:0016860,GO:0016861,GO:0019321,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0051156,GO:0051186,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564 2.7.1.12,2.7.1.15,5.3.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000002568 260.0
DYD3_k127_6471160_5 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000003261 246.0
DYD3_k127_6471160_6 Mannose-6-phosphate isomerase K00971,K16011 - 2.7.7.13,5.3.1.8 0.00000000000000000000000000000000000000000000000000000000005991 216.0
DYD3_k127_6471160_7 lipopolysaccharide transport K22110 - - 0.000000000003871 68.0
DYD3_k127_6471160_8 Putative zinc-finger - - - 0.0000001495 60.0
DYD3_k127_6471799_0 PFAM AMP-dependent synthetase and ligase K01908 - 6.2.1.17 1.361e-305 957.0
DYD3_k127_6471799_1 Tryptophan halogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001854 256.0
DYD3_k127_6471799_2 Ferredoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000009469 235.0
DYD3_k127_6471799_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000005476 229.0
DYD3_k127_6471799_4 alpha beta - - - 0.000000000000000000000000000000000000000000000000000000001277 212.0
DYD3_k127_6471799_5 Methylmuconolactone methyl-isomerase - - - 0.00000000000000000000000000000000000004574 157.0
DYD3_k127_6471799_6 NHase catalyzes the hydration of various nitrile compounds to the corresponding amides - - - 0.00000000000000000000000000001305 123.0
DYD3_k127_6471799_7 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000785 120.0
DYD3_k127_6480468_0 Belongs to the iron ascorbate-dependent oxidoreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003957 315.0
DYD3_k127_6480468_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000002875 259.0
DYD3_k127_6480468_2 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.0000000000000000000000000000000000000000000000000003803 200.0
DYD3_k127_6480468_3 Rubredoxin-like zinc ribbon domain (DUF35_N) K07068 - - 0.00000000000000000000000000000000001328 140.0
DYD3_k127_6496767_0 CoA-transferase family III K07749 - 2.8.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003194 386.0
DYD3_k127_6496767_1 PFAM Phosphoglycerate mutase - - - 0.0000000000000000000000000000000000000000000000004728 192.0
DYD3_k127_6496767_2 Amidohydrolase family - - - 0.000000000000000000000000009498 116.0
DYD3_k127_6499077_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 8.682e-206 658.0
DYD3_k127_6499077_1 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 GO:0000287,GO:0003674,GO:0003824,GO:0004812,GO:0004828,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006434,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009059,GO:0009069,GO:0009070,GO:0009987,GO:0010467,GO:0016053,GO:0016070,GO:0016259,GO:0016260,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0042802,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.1.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 474.0
DYD3_k127_6499077_2 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.0000000000000000000000000000000000000000000000007383 179.0
DYD3_k127_6499077_3 - - - - 0.00000003499 62.0
DYD3_k127_6499077_5 Recombinase zinc beta ribbon domain - - - 0.00006582 50.0
DYD3_k127_6506395_0 Thiamine pyrophosphate enzyme, central domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009982 273.0
DYD3_k127_6506395_1 Oxidoreductase domain protein - - - 0.000000000000000000000000000000000000000002151 166.0
DYD3_k127_6510047_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K11177 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016903,GO:0030151,GO:0033554,GO:0042597,GO:0043167,GO:0043169,GO:0044464,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0055114 1.17.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007036 610.0
DYD3_k127_6510047_1 ThiS family K03636 - - 0.0000000000005105 82.0
DYD3_k127_6542905_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0016469,GO:0030312,GO:0032991,GO:0040007,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045259,GO:0045260,GO:0071944,GO:0098796,GO:0098797 3.6.3.14 2.167e-244 762.0
DYD3_k127_6542905_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0036442,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0046961,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 3.6.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002816 442.0
DYD3_k127_6542905_2 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003291 379.0
DYD3_k127_6542905_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030312,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0036442,GO:0040007,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0046961,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008745 371.0
DYD3_k127_6542905_4 PFAM Cobyrinic acid a,c-diamide synthase K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002564 316.0
DYD3_k127_6542905_5 Belongs to the ParB family K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002725 250.0
DYD3_k127_6542905_6 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.0000000000000000000000000000000000000000000000000000000000000000007444 233.0
DYD3_k127_6542905_7 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000000000000000000000000001394 118.0
DYD3_k127_6542905_8 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 - 2.1.1.170 0.00000000000000000000007045 109.0
DYD3_k127_6542905_9 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.000000000000001217 85.0
DYD3_k127_6550885_0 AICARFT/IMPCHase bienzyme K00602 - 2.1.2.3,3.5.4.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007322 468.0
DYD3_k127_6550885_1 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.000000000000002461 76.0
DYD3_k127_6550885_2 Tetratricopeptide repeat - - - 0.000000009939 64.0
DYD3_k127_656075_0 Alcohol dehydrogenase GroES-like domain K00008 - 1.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001156 280.0
DYD3_k127_656075_1 PFAM FAD linked oxidase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000251 235.0
DYD3_k127_6562859_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000347 478.0
DYD3_k127_6562859_1 peptidase M20 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001893 254.0
DYD3_k127_6562859_2 KR domain K00059,K21883 - 1.1.1.100,1.1.1.401 0.0000000000000000000000000000000000000000000000000000000000000000000002549 247.0
DYD3_k127_6562859_3 Histidine kinase K02482 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000007506 249.0
DYD3_k127_6571205_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 5.54e-288 902.0
DYD3_k127_6571205_1 Catalyzes the sodium-dependent transport of glutamate K03312 - - 0.000000000000000000000000000000000000000000000000000000000001555 217.0
DYD3_k127_6577140_0 NADH dehydrogenase, FAD-containing subunit K03885 - 1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004957 511.0
DYD3_k127_6577140_1 Evidence 4 Homologs of previously reported genes of - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004185 278.0
DYD3_k127_6577140_2 - - - - 0.0000000000001855 72.0
DYD3_k127_6577140_3 - - - - 0.00000000008998 67.0
DYD3_k127_658131_0 Transketolase, pyrimidine binding domain K00162,K00167 - 1.2.4.1,1.2.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004411 437.0
DYD3_k127_658131_1 Dehydrogenase E1 component K00161 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003634 405.0
DYD3_k127_658131_2 Belongs to the dCTP deaminase family K01494 GO:0003674,GO:0003824,GO:0006139,GO:0006220,GO:0006244,GO:0006253,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008829,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009166,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009223,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0018130,GO:0019239,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046065,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576 3.5.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001874 279.0
DYD3_k127_658131_3 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 - 2.7.1.39 0.000000000000000000000000000000000000000000000000000000000000000000001833 248.0
DYD3_k127_658131_4 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes K00627 - 2.3.1.12 0.000000000000000001569 99.0
DYD3_k127_6593873_0 Alanine-glyoxylate amino-transferase K05825 - - 0.00000000000000000000000000000000000000000000000000000000000000001953 233.0
DYD3_k127_6593873_1 His Kinase A (phosphoacceptor) domain K02482 - 2.7.13.3 0.000000000000000001257 90.0
DYD3_k127_6593873_2 methyltransferase - - - 0.000000000000003716 78.0
DYD3_k127_6595680_0 DNA helicase K03654 - 3.6.4.12 2.955e-240 758.0
DYD3_k127_6595680_1 PFAM Binding-protein-dependent transport system inner membrane component K02011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003025 557.0
DYD3_k127_6595680_2 TOBE domain K02010,K02052 - 3.6.3.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 388.0
DYD3_k127_6595680_3 PFAM extracellular solute-binding protein family 1 K02012 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006624 362.0
DYD3_k127_6595680_4 glutamine synthetase K01915 - 6.3.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000793 329.0
DYD3_k127_6595680_5 Dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000005575 236.0
DYD3_k127_6595680_6 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 0.00000007761 64.0
DYD3_k127_6599457_0 Enolase, N-terminal domain K01689 GO:0001968,GO:0003674,GO:0003824,GO:0004634,GO:0005488,GO:0005515,GO:0005518,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009986,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0019899,GO:0030312,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035375,GO:0042866,GO:0043236,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0044877,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0050840,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 4.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006982 557.0
DYD3_k127_6599457_1 Endoribonuclease that initiates mRNA decay K18682 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009462 507.0
DYD3_k127_6599457_2 FAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000654 387.0
DYD3_k127_6599457_3 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004504 392.0
DYD3_k127_6599457_4 Polyprenyl synthetase K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008069 325.0
DYD3_k127_6599457_5 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003244 324.0
DYD3_k127_6599457_6 PFAM Metallophosphoesterase K09769 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008636 317.0
DYD3_k127_6599457_7 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.000000000000007783 78.0
DYD3_k127_6599457_8 Glycosyl transferase family group 2 - - - 0.0000005922 63.0
DYD3_k127_6599457_9 cell cycle K05589,K13052 - - 0.00000995 58.0
DYD3_k127_6609588_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0002790,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006457,GO:0006605,GO:0006810,GO:0006886,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015627,GO:0015628,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032940,GO:0032991,GO:0033036,GO:0033220,GO:0034613,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042802,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0046903,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061077,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:0098776,GO:1901265,GO:1901363,GO:1904680 - 4.056e-270 846.0
DYD3_k127_6609588_1 May be involved in recombinational repair of damaged DNA K03631 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0033554,GO:0034641,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 - 0.000000000000000000000000000000000000000000000000000000000003675 218.0
DYD3_k127_661559_0 NADH pyrophosphatase zinc ribbon domain K03426 - 3.6.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005114 280.0
DYD3_k127_661559_1 Oxidoreductase family, NAD-binding Rossmann fold K10219 - 1.1.1.312 0.00000000000000000000000000000000000000000000000000000000000000000001113 240.0
DYD3_k127_661559_2 Belongs to the CinA family - - - 0.000000000000000000000000000000000000000000000000000003467 199.0
DYD3_k127_661559_3 Peptidase dimerisation domain - - - 0.0000000000000000000000000000000003844 133.0
DYD3_k127_6626959_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702,K08999 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009314,GO:0009380,GO:0009628,GO:0032991,GO:0042802,GO:0044424,GO:0044464,GO:0050896,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 4.152e-273 857.0
DYD3_k127_6626959_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002041 583.0
DYD3_k127_6626959_2 HNH endonuclease - - - 0.0000000000000000000000000000000000000000000000000392 189.0
DYD3_k127_6626959_3 Belongs to the proline racemase family K01777 - 5.1.1.4 0.00000000000000000000000000000002769 127.0
DYD3_k127_6629559_0 His Kinase A (phosphoacceptor) domain K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005173 426.0
DYD3_k127_6629559_2 - - - - 0.0000001749 55.0
DYD3_k127_6637924_0 Domain of unknown function (DUF1998) K06877 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010501,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070035,GO:0071704,GO:0090304,GO:0140098,GO:1901360 - 1.046e-256 810.0
DYD3_k127_6637924_1 Bacterial extracellular solute-binding protein K02012 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000525 377.0
DYD3_k127_6637924_2 PFAM binding-protein-dependent transport systems inner membrane component K02011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005747 367.0
DYD3_k127_6637924_3 Exonuclease K07502 - - 0.000000000000000000000000000000000000000000000000000000000000000000007329 251.0
DYD3_k127_6637924_4 PFAM Lysine exporter protein (LYSE YGGA) - - - 0.0000000000000000000000000000000000000000000000000002206 192.0
DYD3_k127_6638019_0 Cytochrome C assembly protein K02195 GO:0001539,GO:0002048,GO:0002049,GO:0003674,GO:0003824,GO:0004096,GO:0004601,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006518,GO:0006629,GO:0006643,GO:0006664,GO:0006807,GO:0006810,GO:0006928,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009237,GO:0009247,GO:0009636,GO:0009987,GO:0015886,GO:0016020,GO:0016021,GO:0016209,GO:0016491,GO:0016684,GO:0019184,GO:0019290,GO:0019748,GO:0031224,GO:0031226,GO:0034641,GO:0040011,GO:0042221,GO:0043043,GO:0043107,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044425,GO:0044459,GO:0044464,GO:0044550,GO:0046467,GO:0048870,GO:0050896,GO:0051179,GO:0051181,GO:0051186,GO:0051188,GO:0051234,GO:0051674,GO:0051716,GO:0055114,GO:0070887,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0071973,GO:0071975,GO:0071977,GO:0071978,GO:0097237,GO:0097588,GO:0098754,GO:0098869,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1901678,GO:1903509,GO:1990748 - 0.000000000000000000000000000000000000000000000000000000000000000005683 233.0
DYD3_k127_6638019_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990,K02193 - 3.6.3.41 0.0000000000000000000000000000000000000000000000000000009966 201.0
DYD3_k127_6638019_2 PFAM Cytochrome c assembly protein K02198 - - 0.000000000000000000000000000000000000001556 154.0
DYD3_k127_6638019_3 CcmB protein K02194 - - 0.00000000000000000000000000000000000001418 161.0
DYD3_k127_6638019_4 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.000000000000000000000000000000000191 141.0
DYD3_k127_6638019_5 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.000000000000000000000000009624 125.0
DYD3_k127_6638019_6 Belongs to the peptidase M48B family K03799 - - 0.0008496 48.0
DYD3_k127_6640016_0 Acyl-CoA dehydrogenase, C-terminal domain K22027 - 1.14.13.235 0.0000000000000000000000000000000000000000000000000000000000000000000000000195 273.0
DYD3_k127_6640016_1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000002573 241.0
DYD3_k127_6640016_2 NIPSNAP - - - 0.00000000000000000000000000000005752 128.0
DYD3_k127_664124_0 Methylmalonyl-CoA mutase K01847,K01848 - 5.4.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004221 596.0
DYD3_k127_664124_1 Evidence 5 No homology to any previously reported sequences K03765 - - 0.000000000000002062 87.0
DYD3_k127_664124_2 Evidence 5 No homology to any previously reported sequences K03765 - - 0.00004755 54.0
DYD3_k127_6646122_0 aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005002 551.0
DYD3_k127_6646122_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 418.0
DYD3_k127_6646122_2 amidohydrolase K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000009568 260.0
DYD3_k127_6646122_3 AhpC/TSA antioxidant enzyme - - - 0.0000000000000000000000000308 112.0
DYD3_k127_6646925_0 Hydantoinase/oxoprolinase N-terminal region K01473 - 3.5.2.14 2.348e-206 659.0
DYD3_k127_6646925_1 PFAM acyl-CoA dehydrogenase domain protein K00255,K11731 - 1.3.8.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004988 462.0
DYD3_k127_6646925_2 Nitroreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 362.0
DYD3_k127_6646925_3 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000004075 229.0
DYD3_k127_6646925_4 CHAD - - - 0.0000000000000000000000000000000000000000000147 173.0
DYD3_k127_6646925_5 Exopolyphosphatase K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000005909 172.0
DYD3_k127_6646925_6 Phosphoglycerate mutase family - - - 0.00000000000000000006546 95.0
DYD3_k127_6648802_0 AMP-binding enzyme C-terminal domain K00666 - - 1.511e-279 869.0
DYD3_k127_6648802_1 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002814 597.0
DYD3_k127_6648802_2 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 304.0
DYD3_k127_6659544_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657,K13503 - 4.1.3.27 1.043e-247 771.0
DYD3_k127_6659544_1 Aminotransferase K00821 - 2.6.1.11,2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004509 499.0
DYD3_k127_6659544_2 Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004393 354.0
DYD3_k127_6659544_3 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002218 288.0
DYD3_k127_6659544_4 Formate hydrogenlyase K12136,K15827 - - 0.000000000000000000000000000000000000000000000000000004404 198.0
DYD3_k127_6659544_5 -acetyltransferase - - - 0.00000000000000000000000000000000000000000104 162.0
DYD3_k127_6659544_6 GYD domain - - - 0.00000000000000000000000000001601 123.0
DYD3_k127_6659544_7 Regulates arginine biosynthesis genes K03402 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 - 0.000000000000000000006015 100.0
DYD3_k127_6679306_0 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001997 342.0
DYD3_k127_6679306_1 Peptidase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000072 295.0
DYD3_k127_6679306_2 CoA-transferase family III K07749 - 2.8.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000783 251.0
DYD3_k127_6679306_3 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.00000000000000000000000000000000000000000000000000004652 195.0
DYD3_k127_6679306_4 MlaC protein K07323 - - 0.000000000000000000000000000000000000000004268 167.0
DYD3_k127_6679306_5 HAD-hyrolase-like - - - 0.00000000000000000000000000000000000002596 153.0
DYD3_k127_6679306_6 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000002825 104.0
DYD3_k127_6679306_7 - - - - 0.0000000000000000000162 95.0
DYD3_k127_6679306_8 - - - - 0.00000000000000001765 93.0
DYD3_k127_6679306_9 COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL CutL homologs K07303 - 1.3.99.16 0.0000000009741 60.0
DYD3_k127_669695_0 glutamate-cysteine ligase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008744 561.0
DYD3_k127_669695_1 acyl-CoA dehydrogenase activity K00248,K00253 - 1.3.8.1,1.3.8.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006322 398.0
DYD3_k127_669695_10 PFAM NUDIX domain - - - 0.00000000000000000000000000000000000000001315 162.0
DYD3_k127_669695_11 intermembrane phospholipid transfer K07323 - - 0.00000000000000000000000000000000000000005195 165.0
DYD3_k127_669695_12 TIGRFAM drug resistance transporter, EmrB QacA subfamily K18926 - - 0.0000000000000000000000000000000000006961 153.0
DYD3_k127_669695_13 A predicted alpha-helical domain with a conserved ER motif. - - - 0.000000000000000000000000000000005344 147.0
DYD3_k127_669695_14 PAS fold - - - 0.0000000000000000000376 96.0
DYD3_k127_669695_2 Belongs to the binding-protein-dependent transport system permease family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007386 277.0
DYD3_k127_669695_3 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000235 263.0
DYD3_k127_669695_4 ATPases associated with a variety of cellular activities K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000008155 260.0
DYD3_k127_669695_5 Receptor family ligand binding region family protein 22 K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000006796 265.0
DYD3_k127_669695_6 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000006584 255.0
DYD3_k127_669695_7 transglutaminase-like - - - 0.00000000000000000000000000000000000000000000000000008254 209.0
DYD3_k127_669695_8 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000000000000000000000000000000000000000000004882 190.0
DYD3_k127_669695_9 dehydratase - - - 0.000000000000000000000000000000000000000000000002658 188.0
DYD3_k127_6697659_0 ADP-heptose-lipopolysaccharide heptosyltransferase activity K02527,K02841,K02843,K12982 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000000000000000000000000000000000000005429 211.0
DYD3_k127_6697659_1 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.00000000000000000000000000000000000000000000005285 174.0
DYD3_k127_6697659_2 pfkB family carbohydrate kinase K03272 - 2.7.1.167,2.7.7.70 0.0000000001914 63.0
DYD3_k127_6697659_3 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00174 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0030312,GO:0044464,GO:0050896,GO:0055114,GO:0071944 1.2.7.11,1.2.7.3 0.00004266 50.0
DYD3_k127_6703408_0 Peptidase family S49 K04773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002187 319.0
DYD3_k127_6703408_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000303 249.0
DYD3_k127_6703408_2 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000196 239.0
DYD3_k127_6703408_3 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000001251 233.0
DYD3_k127_6703408_4 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000003152 223.0
DYD3_k127_6703408_5 YsiA-like protein, C-terminal region K13770 - - 0.0000000000000000000000000000000000000000000000007458 184.0
DYD3_k127_6703408_6 SCP-2 sterol transfer family - - - 0.00000000000000000000000391 105.0
DYD3_k127_6705668_0 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003242 499.0
DYD3_k127_6716575_0 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 2.045e-201 652.0
DYD3_k127_6716575_1 NADH-quinone oxidoreductase chain L K00341 - 1.6.5.3 3.966e-201 644.0
DYD3_k127_6716575_10 probably responsible for the translocation of the substrate across the membrane K05815 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007336 324.0
DYD3_k127_6716575_11 COGs COG0647 sugar phosphatase of the HAD superfamily K01101,K02566 - 3.1.3.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001269 293.0
DYD3_k127_6716575_12 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.00000000000000000000000000000000000003625 162.0
DYD3_k127_6716575_13 PFAM Peptidase M23 - - - 0.000000000000006889 87.0
DYD3_k127_6716575_2 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001924 601.0
DYD3_k127_6716575_3 Bacterial extracellular solute-binding protein K05813 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004799 499.0
DYD3_k127_6716575_4 ABC-type sugar transport system, periplasmic component K05813 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 439.0
DYD3_k127_6716575_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002745 442.0
DYD3_k127_6716575_6 Binding-protein-dependent transport system inner membrane component K05814 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 363.0
DYD3_k127_6716575_7 C-terminal domain of alpha-glycerophosphate oxidase K00111 - 1.1.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008833 370.0
DYD3_k127_6716575_8 glycerophosphodiester transmembrane transport K05815 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002976 343.0
DYD3_k127_6716575_9 PFAM binding-protein-dependent transport systems inner membrane component K05814 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005662 314.0
DYD3_k127_6718236_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 3.374e-194 617.0
DYD3_k127_6718236_1 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00282 GO:0001505,GO:0003674,GO:0003824,GO:0004375,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005960,GO:0006082,GO:0006520,GO:0006544,GO:0006807,GO:0008150,GO:0008152,GO:0009069,GO:0009987,GO:0016491,GO:0016638,GO:0016642,GO:0017144,GO:0019752,GO:0032991,GO:0042133,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901605,GO:1902494,GO:1990204 1.4.4.2 0.00000000000000000000000000000000000000000000000000002125 192.0
DYD3_k127_6718236_2 Lipoate-protein ligase K03800 - 6.3.1.20 0.00000000000000000000000000000000000000000000136 176.0
DYD3_k127_6721148_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 4.266e-205 668.0
DYD3_k127_6721148_1 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008138 477.0
DYD3_k127_6721148_2 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.0000000000000000000000000000000000000000000911 179.0
DYD3_k127_6721148_3 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000028,GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003723,GO:0003729,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0031167,GO:0032259,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043170,GO:0043412,GO:0043414,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070475,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0140098,GO:0140102,GO:1901360,GO:1901363 2.1.1.182 0.0000001269 61.0
DYD3_k127_674417_0 Permease YjgP YjgQ family protein K07091,K11720 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004665 307.0
DYD3_k127_6755531_0 PFAM acyl-CoA dehydrogenase domain protein K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004029 411.0
DYD3_k127_6755531_1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007423 353.0
DYD3_k127_6755531_2 COG0559 Branched-chain amino acid ABC-type transport system, permease components - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003571 261.0
DYD3_k127_6755531_3 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005487 259.0
DYD3_k127_6755531_4 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.00000000000000000000000000000000000000000000000000000004239 206.0
DYD3_k127_6755531_5 Belongs to the binding-protein-dependent transport system permease family - - - 0.0000000000000000000000000000000000000000009822 181.0
DYD3_k127_6755531_6 Bacterial regulatory proteins, tetR family - - - 0.0000000000000009561 86.0
DYD3_k127_6755531_7 hydrolase (HAD superfamily) K07025 - - 0.00000000000131 71.0
DYD3_k127_6763074_0 FAD dependent oxidoreductase K13796 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004748 591.0
DYD3_k127_6763074_1 NAD(P)H binding domain of trans-2-enoyl-CoA reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000232 336.0
DYD3_k127_6763074_2 Bacitracin resistance protein BacA K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000136 262.0
DYD3_k127_6763074_3 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA - - - 0.000000000000000000000000000000000000000000000000000000000005782 221.0
DYD3_k127_6763074_4 PFAM Glycosyl transferase, family 39 - - - 0.00000000000000000000000000000000000000000009644 176.0
DYD3_k127_6772056_0 Penicillin-binding protein, dimerisation domain K03587 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000337 495.0
DYD3_k127_6772056_1 to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008097 456.0
DYD3_k127_6772056_2 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 K01000 - 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 434.0
DYD3_k127_6772056_3 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 336.0
DYD3_k127_6779474_0 FAD linked oxidases, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 501.0
DYD3_k127_6779474_1 PFAM Alcohol dehydrogenase GroES-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008736 263.0
DYD3_k127_6779474_2 Helix-turn-helix domain - - - 0.00000000000000000000000000007683 134.0
DYD3_k127_6779474_3 ATP-binding region, ATPase domain protein domain protein - - - 0.000000000000000000000001133 110.0
DYD3_k127_6779474_4 periplasmic protein thiol disulfide oxidoreductases, DsbE subfamily K02199 - - 0.0000000000000004811 92.0
DYD3_k127_6779474_5 - - - - 0.00000004235 62.0
DYD3_k127_6781219_0 two component, sigma54 specific, transcriptional regulator, Fis family K02481 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001209 265.0
DYD3_k127_6781219_1 histidine kinase HAMP region domain protein - - - 0.0000000000000000000000000000000000000000001272 169.0
DYD3_k127_6784467_0 Glycosyltransferase family 20 K00697,K13057,K20436 - 2.4.1.15,2.4.1.245,2.4.1.347,2.5.1.135 4.183e-225 718.0
DYD3_k127_6784467_1 Glycosyl hydrolase family 65 central catalytic domain K01194 - 3.2.1.28 0.0000000000000000000000000000000000000005021 160.0
DYD3_k127_6786544_0 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000006707 265.0
DYD3_k127_6786544_1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001727 258.0
DYD3_k127_6789148_0 COG3666 Transposase and inactivated derivatives - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006149 441.0
DYD3_k127_6789148_1 ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000626 349.0
DYD3_k127_6789148_2 F420-dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003039 269.0
DYD3_k127_6789148_3 Transglutaminase/protease-like homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003756 262.0
DYD3_k127_6789148_4 polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000002792 252.0
DYD3_k127_6789148_5 Protein of unknown function DUF58 - - - 0.00000000000000000000000000000000000000000000000001536 192.0
DYD3_k127_6789148_6 PFAM glycosyl transferase family 9 K02843 - - 0.00000000007122 72.0
DYD3_k127_6789148_7 PFAM Luciferase-like monooxygenase - - - 0.0001616 46.0
DYD3_k127_6795639_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000537 505.0
DYD3_k127_6795639_1 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.00000000000000000000000000000000000000000000000000000000000008192 223.0
DYD3_k127_6795639_2 Large family of predicted nucleotide-binding domains - GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000002017 212.0
DYD3_k127_6795639_3 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.00000000000000000000000000000000000000000000000001705 186.0
DYD3_k127_6795639_4 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0050518,GO:0070567 2.7.7.60 0.0000000000000000000000000000000000000000000002891 181.0
DYD3_k127_6798221_0 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family - - - 3.154e-216 681.0
DYD3_k127_6798221_1 SNARE-like domain protein - - - 0.0000000000000000000000000000000000000000000000000000000001211 213.0
DYD3_k127_6798221_2 4Fe-4S single cluster domain - - - 0.000000000000000000000000000000000000000000000000000006536 202.0
DYD3_k127_6805292_0 Multicopper oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005543 364.0
DYD3_k127_6805292_1 Cytochrome C biogenesis protein transmembrane region - - - 0.0000000000000000000000000000000000000000006178 166.0
DYD3_k127_6805292_2 methyltransferase activity - - - 0.000000000000000000000000000000000000002071 164.0
DYD3_k127_6805292_3 SCO1/SenC K07152,K08976 - - 0.0000000000000000000000000000000006178 142.0
DYD3_k127_6805292_4 cellulose binding - - - 0.0000000000000000000000002575 111.0
DYD3_k127_6805292_5 Sortilin, neurotensin receptor 3, - - - 0.000000001915 61.0
DYD3_k127_6805292_6 membrane protein (DUF2078) K08982 - - 0.00001211 57.0
DYD3_k127_6824939_0 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00626 - 2.3.1.9 6.64e-199 639.0
DYD3_k127_6824939_1 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 340.0
DYD3_k127_6824939_2 Domain of Unknown Function (DUF1080) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002287 264.0
DYD3_k127_6824939_3 DUF35 OB-fold domain, acyl-CoA-associated - - - 0.00000000000000000000000000000000000000000000000000000373 206.0
DYD3_k127_6824939_4 haloacid dehalogenase-like hydrolase K01079 - 3.1.3.3 0.000000000000000000007392 95.0
DYD3_k127_6825641_0 with chaperone activity ATP-binding K03696 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 413.0
DYD3_k127_6825641_1 ATP:guanido phosphotransferase, C-terminal catalytic domain K19405 - 2.7.14.1 0.0000000000000000000000000000000000000000000000000000000000000000007016 232.0
DYD3_k127_6825641_2 Clp amino terminal domain, pathogenicity island component K03696 - - 0.000000000000000002139 87.0
DYD3_k127_6827732_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 4.981e-199 635.0
DYD3_k127_6827732_1 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K06147,K11085 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005639 502.0
DYD3_k127_6827732_2 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000001016 164.0
DYD3_k127_6827732_3 Uncharacterised BCR, YnfA/UPF0060 family K09771 - - 0.000000000000000000000000000000000000000223 151.0
DYD3_k127_6827732_4 Protein of unknown function (DUF2867) - - - 0.00000000000000002776 93.0
DYD3_k127_6827732_5 EamA-like transporter family - - - 0.000002841 50.0
DYD3_k127_6829543_0 xanthine dehydrogenase activity K03520 - 1.2.5.3 2.5e-323 1006.0
DYD3_k127_6829543_1 COG0524 Sugar kinases, ribokinase family K00847 - 2.7.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001867 422.0
DYD3_k127_6829543_2 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002526 368.0
DYD3_k127_6829543_3 Belongs to the LarC family K09121 - 4.99.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 352.0
DYD3_k127_6829543_4 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000526 331.0
DYD3_k127_6829543_5 MiaB-like tRNA modifying enzyme K18707 - 2.8.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003309 337.0
DYD3_k127_6829543_6 tRNA processing K06864 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003555 304.0
DYD3_k127_6829543_7 2Fe-2S -binding domain protein K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002651 267.0
DYD3_k127_6829543_8 (AIR) carboxylase K06898 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005371 280.0
DYD3_k127_6829543_9 xanthine dehydrogenase activity K03519 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000002128 217.0
DYD3_k127_6839927_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006544 267.0
DYD3_k127_6839927_1 Belongs to the FGGY kinase family K00851 - 2.7.1.12 0.000000000000000000001499 106.0
DYD3_k127_6839927_2 - - - - 0.00000008592 59.0
DYD3_k127_6839927_3 - - - - 0.000006327 51.0
DYD3_k127_6840633_0 Phenylalanyl-tRNA synthetase, beta subunit K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 481.0
DYD3_k127_6840633_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005567 415.0
DYD3_k127_6846251_0 Alcohol dehydrogenase GroES-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003221 352.0
DYD3_k127_6846251_1 Nitroreductase family K10678 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005052 335.0
DYD3_k127_6846251_2 Metallo-beta-lactamase superfamily K02238 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001442 279.0
DYD3_k127_6846251_3 TIGRFAM Competence protein ComEA, helix-hairpin-helix K02237 - - 0.0000000001889 68.0
DYD3_k127_6859190_0 PFAM peptidase S9 prolyl oligopeptidase active site domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002978 589.0
DYD3_k127_6859190_1 Belongs to the NiCoT transporter (TC 2.A.52) family - - - 0.000000000000000000000000000000004291 132.0
DYD3_k127_6859190_2 Membrane - - - 0.0000000000000000000000000000002212 129.0
DYD3_k127_6859190_5 - - - - 0.00003972 53.0
DYD3_k127_6864681_0 acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001466 568.0
DYD3_k127_6864681_1 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.0000000000000000000000000000000000000000000000000000000000001408 215.0
DYD3_k127_6864681_2 Acetyl-CoA carboxylase, biotin carboxyl carrier protein K01571,K01960 - 4.1.1.3,6.4.1.1 0.00000000000000000000000000000000004925 139.0
DYD3_k127_6864681_3 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3 0.00000000000000002849 94.0
DYD3_k127_6868559_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007795 313.0
DYD3_k127_6868559_1 PFAM histidine triad (HIT) protein K19710 - 2.7.7.53 0.000000000000000000000000000000000000000000000001119 179.0
DYD3_k127_688151_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 5.793e-243 775.0
DYD3_k127_688151_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 2.192e-238 746.0
DYD3_k127_688151_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002301 346.0
DYD3_k127_688151_3 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.00000000000000000007487 104.0
DYD3_k127_6886536_0 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K03386 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004783 406.0
DYD3_k127_6886536_1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00038 - 1.1.1.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006873 312.0
DYD3_k127_6886536_2 COG0834 ABC-type amino acid transport signal transduction systems periplasmic component domain K02030 - - 0.0000000000000000000000000000000000000000000000000000004065 212.0
DYD3_k127_6886536_3 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000002749 141.0
DYD3_k127_6886536_4 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 0.00000000000000000000002538 106.0
DYD3_k127_6886536_5 Pfam:Pyridox_oxidase - - - 0.0000000000000001005 86.0
DYD3_k127_6886536_6 - - - - 0.0000000000000005805 81.0
DYD3_k127_6886536_7 Acetyltransferase (GNAT) domain - - - 0.000144 50.0
DYD3_k127_6888087_0 ATP-grasp domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002409 246.0
DYD3_k127_6888087_2 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000001366 109.0
DYD3_k127_689198_0 the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia K06016 - 3.5.1.6,3.5.1.87 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001869 509.0
DYD3_k127_689198_1 Major Facilitator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001831 443.0
DYD3_k127_6893049_0 Aldehyde oxidase and xanthine dehydrogenase, a b hammerhead domain K03520,K11177 - 1.17.1.4,1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004338 561.0
DYD3_k127_6893049_1 PFAM aldo keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009424 402.0
DYD3_k127_6912046_0 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002388 343.0
DYD3_k127_6912046_1 peptidase dimerisation domain protein K01436 - - 0.00000000000000000000000000000000000000000000000000000000000000004009 228.0
DYD3_k127_6912046_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000004397 99.0
DYD3_k127_6912046_3 - - - - 0.00000000000000000008606 99.0
DYD3_k127_6915164_0 Participates in both transcription termination and antitermination K02600 GO:0001000,GO:0001121,GO:0001125,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019899,GO:0019904,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043175,GO:0043244,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0070063,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576,GO:1903506,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003306 415.0
DYD3_k127_6915164_1 Required for maturation of 30S ribosomal subunits K09748 - - 0.000000000000000000000000000004871 124.0
DYD3_k127_6915164_2 Protein of unknown function (DUF448) K07742 - - 0.000000000001294 74.0
DYD3_k127_6915164_3 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.00007259 53.0
DYD3_k127_6922377_0 Barrel-sandwich domain of CusB or HlyD membrane-fusion K02005,K13888 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 434.0
DYD3_k127_6922377_1 abc transporter K02003,K05685 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008056 300.0
DYD3_k127_6922377_2 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000007832 170.0
DYD3_k127_6923962_0 Cytochrome C and Quinol oxidase polypeptide I - - - 9.551e-200 636.0
DYD3_k127_6923962_1 Multicopper oxidase K00368 - 1.7.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003497 400.0
DYD3_k127_6923962_2 Fe-S oxidoreductases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 365.0
DYD3_k127_6923962_3 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor K02275 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000003807 215.0
DYD3_k127_6923962_4 UbiA prenyltransferase family K02257 - 2.5.1.141 0.0000000000000000000000000000000000000000000000000000006934 217.0
DYD3_k127_6923962_5 Cytochrome C and Quinol oxidase polypeptide I - - - 0.0000000000000000000000000000000000000000000000003786 195.0
DYD3_k127_6923962_6 Pfam:DUF59 - - - 0.000000000000000000000000003918 116.0
DYD3_k127_6923962_7 - - - - 0.0000003597 53.0
DYD3_k127_6929871_0 FtsX-like permease family K02004 - - 2.549e-245 786.0
DYD3_k127_6929871_1 AcrB/AcrD/AcrF family K03296 - - 1.079e-205 662.0
DYD3_k127_6929871_2 PFAM amidohydrolase K07045 - - 3.717e-196 619.0
DYD3_k127_6929871_3 Lipocalin-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 425.0
DYD3_k127_6929871_4 taurine catabolism dioxygenase K03119 - 1.14.11.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002231 376.0
DYD3_k127_6929871_5 PFAM ABC transporter related K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001715 261.0
DYD3_k127_6929871_6 PFAM transport-associated - - - 0.00000000000000000000000000000001154 138.0
DYD3_k127_6929871_7 Protein of unknown function (DUF1810) - - - 0.0000000000000000000000001195 112.0
DYD3_k127_6929871_8 Belongs to the ABC transporter superfamily K02032,K10823 - - 0.00000000000000000004301 97.0
DYD3_k127_6942414_0 phenylalanyl-tRNA synthetase (beta subunit) K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000005898 259.0
DYD3_k127_6942414_1 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.000000004147 63.0
DYD3_k127_6945475_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003398 384.0
DYD3_k127_6945475_1 Catechol dioxygenase N terminus K04098 - 1.13.11.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004547 371.0
DYD3_k127_6945475_2 Sulfite exporter TauE/SafE - - - 0.000000000000000000000000000000000000000000266 167.0
DYD3_k127_6945475_3 Phosphoserine phosphatase K01079 - 3.1.3.3 0.00000006712 62.0
DYD3_k127_6946212_0 Thioredoxin - - - 0.000000000000000000000000000000000000000001743 168.0
DYD3_k127_6946212_1 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.00000000000000000000000000000104 124.0
DYD3_k127_6946212_2 COG3806 Anti-sigma factor - - - 0.0000000000000000113 90.0
DYD3_k127_6946212_3 PFAM lipid A biosynthesis domain protein - - - 0.000000002803 59.0
DYD3_k127_694768_0 Domain of unknown function (DUF4445) K04755,K08952,K08953,K08954 GO:0005575,GO:0005622,GO:0005623,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044464,GO:0046858 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 498.0
DYD3_k127_694768_1 N-terminal TM domain of oligopeptide transport permease C K15582 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 396.0
DYD3_k127_694768_2 PFAM binding-protein-dependent transport systems inner membrane component K02033,K15581 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007135 282.0
DYD3_k127_694768_3 Uroporphyrinogen decarboxylase (URO-D) - - - 0.0000000000000000000000000000000000000000000000000000000000000002832 237.0
DYD3_k127_694768_4 PFAM MaoC like domain - - - 0.0000000000000000000000000000006693 135.0
DYD3_k127_694768_5 PFAM extracellular solute-binding protein family 5 K02035 - - 0.00000001542 66.0
DYD3_k127_6957737_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 8.397e-211 697.0
DYD3_k127_6957737_1 PFAM UvrD REP helicase K03657 - 3.6.4.12 9.823e-200 647.0
DYD3_k127_6957737_2 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 435.0
DYD3_k127_6957737_3 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001762 340.0
DYD3_k127_6957737_4 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000002644 263.0
DYD3_k127_6957737_5 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0000000000000000000000001423 121.0
DYD3_k127_6959467_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972,K02342,K04096,K12472 GO:0000287,GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0016874,GO:0016886,GO:0030312,GO:0033554,GO:0034641,GO:0034645,GO:0040007,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0071944,GO:0090304,GO:0140097,GO:1901360,GO:1901576 2.7.7.7,6.5.1.2 7.433e-246 777.0
DYD3_k127_6959467_1 Bacterial type II and III secretion system protein K02453,K03219 - - 0.00000000000000000000000000000000000000000000000000000000000001967 230.0
DYD3_k127_6985594_0 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) K01214 - 3.2.1.68 0.0 1038.0
DYD3_k127_6985594_1 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 3.335e-281 885.0
DYD3_k127_6985594_10 Sodium/hydrogen exchanger family - - - 0.00000000000000000003052 106.0
DYD3_k127_6985594_2 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 7.737e-203 661.0
DYD3_k127_6985594_3 Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine K13571 GO:0000166,GO:0000302,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006464,GO:0006508,GO:0006807,GO:0006950,GO:0006979,GO:0008144,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009405,GO:0009987,GO:0010035,GO:0010498,GO:0016020,GO:0016740,GO:0016874,GO:0016879,GO:0016881,GO:0017076,GO:0018193,GO:0018205,GO:0019538,GO:0019787,GO:0019941,GO:0030163,GO:0030312,GO:0030554,GO:0032446,GO:0032553,GO:0032555,GO:0032559,GO:0033554,GO:0034599,GO:0034614,GO:0035639,GO:0035690,GO:0036094,GO:0036211,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044419,GO:0044464,GO:0050896,GO:0051409,GO:0051603,GO:0051704,GO:0051716,GO:0070490,GO:0070647,GO:0070887,GO:0071241,GO:0071704,GO:0071731,GO:0071732,GO:0071944,GO:0097159,GO:0097366,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902170 6.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 572.0
DYD3_k127_6985594_4 Pup-ligase protein K20814 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0006464,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0010498,GO:0016787,GO:0016810,GO:0016811,GO:0017076,GO:0018193,GO:0018205,GO:0019538,GO:0019941,GO:0030163,GO:0030554,GO:0032446,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0036211,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0051603,GO:0070490,GO:0070647,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 3.5.1.119 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002311 522.0
DYD3_k127_6985594_5 Belongs to the Glu Leu Phe Val dehydrogenases family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 515.0
DYD3_k127_6985594_6 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K03438,K13292 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0008961,GO:0009058,GO:0009059,GO:0009249,GO:0009898,GO:0009987,GO:0010467,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0031224,GO:0031226,GO:0034645,GO:0036211,GO:0042157,GO:0042158,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0051604,GO:0071704,GO:0071944,GO:0098552,GO:0098562,GO:0140096,GO:1901564,GO:1901566,GO:1901576 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 318.0
DYD3_k127_6985594_7 Proteasome subunit K03433 GO:0000502,GO:0003674,GO:0003824,GO:0004175,GO:0004298,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005839,GO:0005886,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009405,GO:0009987,GO:0010498,GO:0016020,GO:0016787,GO:0019538,GO:0019774,GO:0019899,GO:0019941,GO:0030163,GO:0032991,GO:0035375,GO:0040007,GO:0043170,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044419,GO:0044424,GO:0044464,GO:0051603,GO:0051704,GO:0070003,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1905368,GO:1905369 3.4.25.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001979 316.0
DYD3_k127_6985594_8 Proteasome subunit K03432 - 3.4.25.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000299 297.0
DYD3_k127_6985594_9 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000002917 194.0
DYD3_k127_6995706_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1277.0
DYD3_k127_6995706_1 Adenylate and Guanylate cyclase catalytic domain - - - 1.328e-307 977.0
DYD3_k127_6995706_10 Metal binding domain of Ada K00567 - 2.1.1.63 0.0000000000000000000000000000000001884 135.0
DYD3_k127_6995706_11 DinB superfamily - - - 0.00004309 55.0
DYD3_k127_6995706_2 Pyruvate kinase, alpha/beta domain K00873 GO:0001871,GO:0003674,GO:0003824,GO:0004743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006116,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009986,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019674,GO:0019693,GO:0019752,GO:0030246,GO:0030247,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:2001065 2.7.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007318 435.0
DYD3_k127_6995706_3 Aminotransferase class I and II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001775 409.0
DYD3_k127_6995706_4 Oxygenase, catalysing oxidative methylation of damaged DNA K09990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001469 306.0
DYD3_k127_6995706_5 PFAM AMP-dependent synthetase and ligase K00666 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001822 314.0
DYD3_k127_6995706_6 Belongs to the enoyl-CoA hydratase isomerase family K15866 - 5.3.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001768 279.0
DYD3_k127_6995706_7 GlcNAc-PI de-N-acetylase - - - 0.00000000000000000000000000000000000000000000000000000000000001332 223.0
DYD3_k127_6995706_8 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000004747 222.0
DYD3_k127_6995706_9 PFAM Formylglycine-generating sulfatase enzyme - - - 0.000000000000000000000000000000000000000000000000000000001549 209.0
DYD3_k127_7025849_0 UDP-N-acetylglucosamine 2-epimerase activity K01791,K13019,K18429 GO:0003674,GO:0003824,GO:0004553,GO:0005975,GO:0008150,GO:0008152,GO:0009058,GO:0016051,GO:0016787,GO:0016798,GO:0044238,GO:0071704,GO:1901576 3.2.1.184,5.1.3.14,5.1.3.23 0.000000000000000000000000000000000004798 141.0
DYD3_k127_7025849_1 Methyltransferase domain - - - 0.00000000000000000007267 101.0
DYD3_k127_7035622_0 mandelate racemase muconate lactonizing - - - 0.000000000000000000000000000000000000000000000000000000000000000000006225 250.0
DYD3_k127_7035622_1 Putative cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000006109 233.0
DYD3_k127_7035622_2 Putative cyclase - - - 0.0000000000000000000000000000000003545 134.0
DYD3_k127_7038376_0 Periplasmic binding protein domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001908 507.0
DYD3_k127_7038376_1 Branched-chain amino acid transport system / permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000352 413.0
DYD3_k127_7038376_10 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.000000000000000005651 87.0
DYD3_k127_7038376_2 Branched-chain amino acid transport system / permease component K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001641 370.0
DYD3_k127_7038376_3 Belongs to the ABC transporter superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000814 382.0
DYD3_k127_7038376_4 ATPases associated with a variety of cellular activities - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003365 352.0
DYD3_k127_7038376_5 Belongs to the ABC transporter superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009282 354.0
DYD3_k127_7038376_6 N-terminal TM domain of oligopeptide transport permease C K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005214 271.0
DYD3_k127_7038376_7 Branched-chain amino acid ATP-binding cassette transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001101 284.0
DYD3_k127_7038376_8 ABC transporter substrate-binding protein K02035 - - 0.0000000000000000000000000000000000000000000000000000002241 214.0
DYD3_k127_7038376_9 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.0000000000000000000000001977 108.0
DYD3_k127_7041237_0 AAA domain - - - 1.618e-260 844.0
DYD3_k127_7041237_1 Aminotransferase class-III K01845 - 5.4.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003957 507.0
DYD3_k127_7041237_2 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003725 461.0
DYD3_k127_7041237_3 Belongs to the LDH2 MDH2 oxidoreductase family K16844 - 1.1.1.338 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008711 360.0
DYD3_k127_7041237_4 mandelate racemase muconate lactonizing K01856,K02549 - 4.2.1.113,5.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001324 342.0
DYD3_k127_7041237_5 TIM-barrel fold metal-dependent hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006281 254.0
DYD3_k127_7041237_6 Rieske (2fe-2S) - - - 0.000000000000000000000000000000000000000000000000000000000008533 217.0
DYD3_k127_7041237_7 glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000000000277 162.0
DYD3_k127_7041237_8 lactoylglutathione lyase activity - - - 0.000000000000000000000000000000000000193 151.0
DYD3_k127_7041237_9 SNARE associated Golgi protein - - - 0.0000000000000000000000000001575 124.0
DYD3_k127_7044614_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 9.225e-220 696.0
DYD3_k127_7044614_1 Domain of unknown function (DUF4212) K14393 - - 0.000000000000004827 82.0
DYD3_k127_7047618_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1099.0
DYD3_k127_7047618_1 acetyl-coa acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006764 551.0
DYD3_k127_7047618_10 cheY-homologous receiver domain K13589 - - 0.000000005812 63.0
DYD3_k127_7047618_11 SMART ATP-binding region ATPase domain protein - - - 0.0003183 55.0
DYD3_k127_7047618_2 4 iron, 4 sulfur cluster binding K00113,K00176,K05524,K13795,K13796 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0022900,GO:0043167,GO:0043169,GO:0044237,GO:0044464,GO:0045333,GO:0046872,GO:0048037,GO:0051536,GO:0051540,GO:0055114,GO:0071944 1.1.5.3,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003545 374.0
DYD3_k127_7047618_3 Rubrerythrin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000332 243.0
DYD3_k127_7047618_4 Urate oxidase N-terminal - - - 0.000000000000000000000000000000000000000000000004194 181.0
DYD3_k127_7047618_5 Protein of unknown function (DUF3501) - - - 0.000000000000000000000000000000000002609 155.0
DYD3_k127_7047618_6 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.000000000000000000000000000000000004025 155.0
DYD3_k127_7047618_7 Ferric uptake regulator, Fur family K09825 - - 0.00000000000000000000000000002995 122.0
DYD3_k127_7047618_8 response regulator, receiver - - - 0.0000000000004516 84.0
DYD3_k127_7047618_9 Protein of unknown function (DUF4242) - - - 0.000000003398 66.0
DYD3_k127_7055174_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 3.936e-212 689.0
DYD3_k127_7055174_1 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.0000000000000000000000000000000000000000000000000000000000000006507 227.0
DYD3_k127_7055174_2 it plays a direct role in the translocation of protons across the membrane K02108 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016021,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0042777,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000000000000000000000000000000000000000006032 206.0
DYD3_k127_7055174_3 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.0000000000005915 75.0
DYD3_k127_7055174_4 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter K02116 - - 0.00000000522 61.0
DYD3_k127_7063666_0 Carboxyl transferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002669 564.0
DYD3_k127_7063666_1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00046 - 1.1.1.69 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001549 308.0
DYD3_k127_7063666_2 Belongs to the pseudouridine synthase RsuA family K06181 - 5.4.99.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002671 268.0
DYD3_k127_7063666_3 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.0000000000000000000008089 96.0
DYD3_k127_7063851_0 Carboxyl transferase domain K01963 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 344.0
DYD3_k127_7063851_1 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000001874 261.0
DYD3_k127_7063851_2 PFAM Mur ligase family, glutamate ligase domain K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000007606 269.0
DYD3_k127_7063851_3 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000001233 153.0
DYD3_k127_7067029_0 MacB-like periplasmic core domain K02004,K05685 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003478 489.0
DYD3_k127_7067029_1 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000346 291.0
DYD3_k127_7067029_2 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K01142,K10773 GO:0000702,GO:0000703,GO:0003674,GO:0003824,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006289,GO:0006296,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0033683,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 3.1.11.2,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000001973 274.0
DYD3_k127_7067029_3 P-aminobenzoate N-oxygenase AurF - - - 0.0000000000000000000000000000000000000000000004793 175.0
DYD3_k127_7067029_4 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000001714 143.0
DYD3_k127_7067029_5 PFAM Glyoxalase bleomycin resistance protein dioxygenase K08234 - - 0.00000000000000000000001977 109.0
DYD3_k127_7067029_6 ABC transporter K02003 - - 0.00000000000000927 76.0
DYD3_k127_7067029_7 Domain of unknown function (DUF4149) - - - 0.00000003593 61.0
DYD3_k127_7069900_0 PAC2 family - - - 0.0000000000000000000000000000000000000000000000000006109 193.0
DYD3_k127_7069900_1 PFAM Peptidase M23 - - - 0.000000000000000000000000000000000000000000000931 176.0
DYD3_k127_7069900_2 PFAM Phenazine biosynthesis PhzC PhzF protein K06998 - 5.3.3.17 0.00000000000000000000001108 109.0
DYD3_k127_7078342_0 thiolester hydrolase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 444.0
DYD3_k127_7078342_1 Cysteine-rich domain K11473 GO:0003674,GO:0003824,GO:0006066,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009441,GO:0009987,GO:0016054,GO:0016491,GO:0016614,GO:0017144,GO:0019154,GO:0019752,GO:0032787,GO:0034308,GO:0034310,GO:0042737,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046164,GO:0046296,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:1901575,GO:1901615,GO:1901616 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002377 416.0
DYD3_k127_7078342_2 FAD linked oxidases, C-terminal domain K00102,K00104 GO:0003674,GO:0003824,GO:0006066,GO:0006082,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009441,GO:0009987,GO:0016054,GO:0016491,GO:0016614,GO:0017144,GO:0019154,GO:0019752,GO:0032787,GO:0033554,GO:0034308,GO:0034310,GO:0042737,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046164,GO:0046296,GO:0046395,GO:0050896,GO:0051716,GO:0055114,GO:0071704,GO:0072329,GO:1901575,GO:1901615,GO:1901616 1.1.2.4,1.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 347.0
DYD3_k127_7078342_3 D-isomer specific 2-hydroxyacid dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007307 317.0
DYD3_k127_7078342_4 FAD binding domain K11472 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006302 315.0
DYD3_k127_7078342_5 PFAM peptidase S1 and S6, chymotrypsin Hap K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003831 285.0
DYD3_k127_7078342_6 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.00000000000000000000000000000000000000000000000000000000000000000000000003507 260.0
DYD3_k127_7078342_7 May be involved in the biosynthesis of molybdopterin K03638 - 2.7.7.75 0.0000000000000000000000000000000000000000000000000000001139 204.0
DYD3_k127_7078342_8 dehydrogenase and related dehydrogenases - - - 0.000000000000000000000001447 107.0
DYD3_k127_7078342_9 Rieske-like [2Fe-2S] domain K00363 - 1.7.1.15 0.0000000000000002771 86.0
DYD3_k127_7081476_0 Protein of unknown function (DUF3500) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001519 292.0
DYD3_k127_7081476_1 thiamine-containing compound biosynthetic process K02051 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000642 292.0
DYD3_k127_7081476_3 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K12267 - 1.8.4.11,1.8.4.12 0.0000000000000000000000000000000000000000000000000000000001125 222.0
DYD3_k127_7087735_0 RNA polymerase sigma factor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006768 365.0
DYD3_k127_7087735_1 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006869 374.0
DYD3_k127_7087735_2 DNA polymerase alpha chain like domain K07053,K20859 - 3.1.3.97,3.1.4.57 0.0000000000000000000000000000000000000000000000000000000000000000000002412 257.0
DYD3_k127_7087735_3 NUDIX domain K03574 - 3.6.1.55 0.000000000000000000000000000000001908 136.0
DYD3_k127_7087735_4 PFAM YCII-related - - - 0.0000000000000000000009418 105.0
DYD3_k127_7090681_0 Copper resistance protein D K07245 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009689 402.0
DYD3_k127_7090681_1 SMART PUA domain containing protein K06969 - 2.1.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 323.0
DYD3_k127_7090681_2 Belongs to the CDP-alcohol phosphatidyltransferase class-I family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007588 250.0
DYD3_k127_7090681_3 Methyltransferase domain - - - 0.0000000000000000000000006563 114.0
DYD3_k127_7090681_4 Belongs to the arginase family K01480 - 3.5.3.11 0.00006711 46.0
DYD3_k127_7112268_0 Domain of unknown function (DUF1932) - - - 0.000000000000000000000000000000000000000000000000003439 188.0
DYD3_k127_7112268_1 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.00000000001174 71.0
DYD3_k127_712355_0 Hydantoinase B/oxoprolinase K01474 - 3.5.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002386 622.0
DYD3_k127_712355_1 Hydantoinase/oxoprolinase N-terminal region K01473 - 3.5.2.14 0.000000000002248 69.0
DYD3_k127_712783_0 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679,K01744 - 4.2.1.2,4.3.1.1 2.113e-209 659.0
DYD3_k127_712783_1 Chromate transporter K07240 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005789 461.0
DYD3_k127_712783_2 Histidine kinase K01991,K03413 - - 0.000000000000000000000000000000000000000000000000000000000000000586 225.0
DYD3_k127_7149364_0 4-hydroxyphenylacetate 3-hydroxylase C terminal K00483 - 1.14.14.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001639 424.0
DYD3_k127_7149364_1 Anticodon-binding domain of tRNA K01870 - 6.1.1.5 0.0000000000000000000000000000000000000000000000000005754 195.0
DYD3_k127_7149364_2 gntR family - - - 0.000000000002428 80.0
DYD3_k127_7152968_0 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003026 394.0
DYD3_k127_7152968_1 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006887 352.0
DYD3_k127_7152968_2 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002502 338.0
DYD3_k127_7152968_3 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001086 250.0
DYD3_k127_7152968_4 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0030312,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000004501 244.0
DYD3_k127_7152968_5 Catalyzes the reversible phosphorylation of UMP to UDP K09903 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000002878 235.0
DYD3_k127_7152968_6 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000004422 194.0
DYD3_k127_7152968_7 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.0000000000000000000000000000000000000000000006722 172.0
DYD3_k127_7163223_0 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 477.0
DYD3_k127_7163223_1 Multicopper oxidase K00368 - 1.7.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000001035 264.0
DYD3_k127_7163223_2 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.000000000000000000000000000000000000000663 156.0
DYD3_k127_7163223_3 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.000000000000000003317 86.0
DYD3_k127_7163223_4 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.00003664 51.0
DYD3_k127_71657_0 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate K00761 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008281 314.0
DYD3_k127_71657_1 Short-chain dehydrogenase reductase (SDR) - - - 0.000000000000000000000000000000000000000000000000000000000000000000001163 252.0
DYD3_k127_716975_0 Pfam Copper resistance K07245 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009186 400.0
DYD3_k127_716975_1 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004503 315.0
DYD3_k127_716975_2 PFAM Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.0000000008558 61.0
DYD3_k127_7174238_0 Aminotransferase class I and II K10206,K14261 GO:0003674,GO:0003824,GO:0004021,GO:0006082,GO:0006090,GO:0006520,GO:0006522,GO:0006523,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009078,GO:0009079,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0019272,GO:0019752,GO:0030632,GO:0032787,GO:0042851,GO:0042852,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046144,GO:0046145,GO:0046394,GO:0046416,GO:0046436,GO:0046437,GO:0047635,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002906 580.0
DYD3_k127_7174238_1 amino acid-binding ACT domain protein K00003 - 1.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004039 457.0
DYD3_k127_7174238_2 Peptidase family M23 - - - 0.000000000000000000000000000000000000001277 165.0
DYD3_k127_7174238_3 PFAM conserved K07027 - - 0.000000000000000000000000000000000002504 151.0
DYD3_k127_7174238_4 Polymer-forming cytoskeletal - - - 0.00000000000000000000000002898 114.0
DYD3_k127_7174238_5 Sigma-70 region 2 K03088 - - 0.00000000000000000000004511 109.0
DYD3_k127_7174238_6 Serine aminopeptidase, S33 K09023 - - 0.000000000005273 68.0
DYD3_k127_7174238_7 AntiSigma factor - - - 0.000001023 60.0
DYD3_k127_7221386_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 636.0
DYD3_k127_7221386_1 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000002428 191.0
DYD3_k127_7221386_2 xanthine dehydrogenase activity K03519 - 1.2.5.3 0.00000000000000000000000000000000000000000000000007573 188.0
DYD3_k127_7221386_3 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.00000000000000000000000000000000000005461 155.0
DYD3_k127_7221386_4 Carbon monoxide dehydrogenase subunit G (CoxG) K09386 - - 0.00000001738 62.0
DYD3_k127_7221386_5 Protein of unknown function (DUF3096) - - - 0.00001145 50.0
DYD3_k127_7321_0 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002219 470.0
DYD3_k127_7321_1 Alcohol dehydrogenase GroES-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004418 256.0
DYD3_k127_7321_2 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K13039 - 4.1.1.79 0.000000000000000000000000000000000005252 152.0
DYD3_k127_7321_3 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K06034 - 4.1.1.79 0.0000000000000000000000000000001742 138.0
DYD3_k127_746837_0 Enoyl-(Acyl carrier protein) reductase K00059,K00068 - 1.1.1.100,1.1.1.140 0.0000000000000000000000000000000000000000000000000000000000000000000000008366 265.0
DYD3_k127_746837_1 serine-type endopeptidase activity K04691,K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000178 205.0
DYD3_k127_746837_2 Prolyl oligopeptidase family - - - 0.00000000000000000000000000000000000000002136 164.0
DYD3_k127_746837_3 Virulence factor BrkB K07058 - - 0.00000000000000000791 93.0
DYD3_k127_746837_4 CoA-transferase family III - - - 0.000000000000002961 77.0
DYD3_k127_760070_0 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002646 288.0
DYD3_k127_760070_1 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006048 280.0
DYD3_k127_760070_2 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003337 274.0
DYD3_k127_760070_3 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000008328 175.0
DYD3_k127_760070_4 Family of unknown function (DUF1028) - - - 0.00000000000000000000000000000000000000000001242 183.0
DYD3_k127_760070_5 - - - - 0.0000000000000000000000000000000000001952 146.0
DYD3_k127_760070_6 Winged helix DNA-binding domain K09927 - - 0.00000000000000000000000000000000001463 148.0
DYD3_k127_760070_7 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 0.00000000889 58.0
DYD3_k127_760070_8 Cupin - - - 0.00001291 58.0
DYD3_k127_778956_0 Hydantoinase B/oxoprolinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007647 342.0
DYD3_k127_778956_1 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000004005 246.0
DYD3_k127_778956_2 Tetratricopeptide repeat - - - 0.00000000000000000000000001527 116.0
DYD3_k127_779420_0 N-terminal half of MaoC dehydratase - - - 2.394e-206 648.0
DYD3_k127_779420_1 Adenylate - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 529.0
DYD3_k127_779420_2 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 391.0
DYD3_k127_779420_3 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001391 317.0
DYD3_k127_779420_4 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009298 260.0
DYD3_k127_779420_5 Glycoside hydrolase family 3 K01207 - 3.2.1.52 0.00000000000000000000000000000000000000000000000000000000000003337 243.0
DYD3_k127_779420_6 Thioesterase-like superfamily - - - 0.00000000254 68.0
DYD3_k127_792081_0 Two component, sigma54 specific, transcriptional regulator, Fis family K07712,K07714 - - 0.00000000000000000000000000000000000000000000215 171.0
DYD3_k127_800627_0 Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway K03707 - 3.5.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004185 310.0
DYD3_k127_800627_1 Belongs to the UbiD family K16874 - - 0.000000000000000000000000000000000000000000000000000000003709 216.0
DYD3_k127_800627_2 Acetamidase/Formamidase family - - - 0.000000000000000000000000000225 119.0
DYD3_k127_800627_3 Peptidase M4, propeptide, PepSY - - - 0.00000000000000000001287 103.0
DYD3_k127_804074_0 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02481 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002047 446.0
DYD3_k127_804074_1 Iron-binding zinc finger CDGSH type - - - 0.00000000000001229 75.0
DYD3_k127_804074_2 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000001116 53.0
DYD3_k127_804074_3 Uncharacterised MFS-type transporter YbfB - - - 0.00005484 55.0
DYD3_k127_807816_0 His Kinase A (phosphoacceptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005882 576.0
DYD3_k127_807816_1 Acyl-CoA dehydrogenase, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002565 514.0
DYD3_k127_807816_2 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009397 441.0
DYD3_k127_807816_3 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 349.0
DYD3_k127_807816_4 Helix-turn-helix domain - - - 0.0000000000000000000006567 100.0
DYD3_k127_807816_5 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000008122 72.0
DYD3_k127_810248_0 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001902 524.0
DYD3_k127_810248_1 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000535 280.0
DYD3_k127_810248_2 ABC transporter substrate binding protein K01989 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002698 298.0
DYD3_k127_810248_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000006002 181.0
DYD3_k127_810248_4 Cupin domain - - - 0.000000000000000000000000000000000000000001524 162.0
DYD3_k127_810823_0 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007754 445.0
DYD3_k127_810823_1 FixH - - - 0.0000000000000000000001255 103.0
DYD3_k127_813238_0 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006935 324.0
DYD3_k127_813238_1 Haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000000116 199.0
DYD3_k127_813238_2 sulfur carrier activity - - - 0.000000000000000007915 85.0
DYD3_k127_818001_0 Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 1.369e-300 957.0
DYD3_k127_818001_1 Redoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000002952 230.0
DYD3_k127_818001_2 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000000000000001337 152.0
DYD3_k127_818001_3 Conserved hypothetical protein (Lin0512_fam) - - - 0.0000000000000000000000002064 109.0
DYD3_k127_818001_4 KR domain K00059 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0010130,GO:0016043,GO:0016491,GO:0016614,GO:0016616,GO:0018913,GO:0018915,GO:0022607,GO:0042537,GO:0043933,GO:0044085,GO:0044237,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360 1.1.1.100 0.00000000003635 64.0
DYD3_k127_818167_0 Ribosomal protein S1 K02945,K03527 - 1.17.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002217 289.0
DYD3_k127_818167_1 Ribosomal protein S1 K02945,K03527,K07571 - 1.17.7.4 0.000000000000000000000000000000000000000000000000000000000000000002047 229.0
DYD3_k127_818167_2 PFAM Prephenate dehydrogenase K04517 - 1.3.1.12 0.00000000000000000000000000000000000000000000000000000000006919 220.0
DYD3_k127_818167_3 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.00000000000000000000000000000000000000000000000000000001826 205.0
DYD3_k127_818167_4 Phosphate acyltransferases K00655 - 2.3.1.51 0.000000000000000000000000000000000000002138 159.0
DYD3_k127_818167_5 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000000000000000000000000000002254 141.0
DYD3_k127_827117_0 ABC transporter K15738 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001373 601.0
DYD3_k127_827117_1 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003385 449.0
DYD3_k127_827117_2 PFAM Asp Glu hydantoin racemase K01799 - 5.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000002846 259.0
DYD3_k127_827117_3 Belongs to the amidase family K21801 - - 0.000000000000000000000000000000000000000000000000000000000000001521 224.0
DYD3_k127_827117_4 COG1062 Zn-dependent alcohol dehydrogenases, class III K00121 - 1.1.1.1,1.1.1.284 0.000000000000000000000000000000000000000000000000000000000000005267 220.0
DYD3_k127_827117_5 hydroperoxide reductase activity - - - 0.0000000000000000000000000000009687 138.0
DYD3_k127_827117_6 PFAM Cupin 2 conserved barrel domain protein K21700 - - 0.0000000000000000000000002084 114.0
DYD3_k127_827117_7 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000000000005354 106.0
DYD3_k127_827117_8 - - - - 0.000003837 53.0
DYD3_k127_834751_0 DegT/DnrJ/EryC1/StrS aminotransferase family K12452 - 1.17.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006009 404.0
DYD3_k127_834751_1 PFAM flavin reductase domain protein FMN-binding K21185 - - 0.0000000000000000000006154 98.0
DYD3_k127_834751_2 Glycosyl transferases group 1 - - - 0.000002168 60.0
DYD3_k127_837402_0 Flavocytochrome c sulphide dehydrogenase, flavin-binding K17218 - 1.8.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006393 389.0
DYD3_k127_837402_1 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000004308 96.0
DYD3_k127_841756_0 Zn-dependent hydrolases of the beta-lactamase fold K13985 - 3.1.4.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 316.0
DYD3_k127_841756_1 Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG K03189 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007208 259.0
DYD3_k127_841756_2 Two component transcriptional regulator, winged helix family K07658,K07668 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002369 257.0
DYD3_k127_841756_3 Required for maturation of urease via the functional incorporation of the urease nickel metallocenter K03190 - - 0.0000000000000000000000000001368 127.0
DYD3_k127_841756_4 Two component, sigma54 specific, transcriptional regulator, Fis family K07712,K07714 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0043565,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000003479 76.0
DYD3_k127_861132_0 COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases K01895 - 6.2.1.1 3.482e-224 708.0
DYD3_k127_861132_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 380.0
DYD3_k127_861132_2 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008385 263.0
DYD3_k127_861132_3 SIS domain K07106 - 4.2.1.126 0.000000000000000000000000000000000000000000000000000000000000000000000007231 252.0
DYD3_k127_861132_4 - - - - 0.0000000000004594 71.0
DYD3_k127_889778_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001548 346.0
DYD3_k127_889778_1 Catalyzes the non-heme iron(II)-dependent oxidative cleavage of 2,3-dihydroxyphenylpropionic acid and 2,3- dihydroxicinnamic acid into 2-hydroxy-6-ketononadienedioate and 2- hydroxy-6-ketononatrienedioate, respectively K04099,K04101 - 1.13.11.57,1.13.11.8 0.0000000000000000000000000000000000000000000000000000000000003811 220.0
DYD3_k127_889778_2 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000009512 95.0
DYD3_k127_889778_3 Diacylglycerol kinase catalytic domain (presumed) K07029 GO:0003674,GO:0003824,GO:0004143,GO:0005575,GO:0005623,GO:0005886,GO:0006629,GO:0006643,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009247,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044464,GO:0046467,GO:0071704,GO:0071944,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.1.107 0.000000264 61.0
DYD3_k127_889778_5 Aromatic-ring-opening dioxygenase LigAB, LigA subunit - - - 0.00003692 49.0
DYD3_k127_889778_6 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00018,K00058 - 1.1.1.29,1.1.1.399,1.1.1.95 0.0006637 52.0
DYD3_k127_899587_0 2-methylcitrate dehydratase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 323.0
DYD3_k127_899587_1 Cytochrome c7 and related cytochrome c - - - 0.00000000000000000000000001007 115.0
DYD3_k127_899587_2 PFAM Abortive infection protein K07052 - - 0.0000000000000119 84.0
DYD3_k127_909870_0 peptidase S9A, prolyl oligopeptidase domain protein beta-propeller K01354 - 3.4.21.83 2.007e-216 692.0
DYD3_k127_909870_1 introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX K03404,K03405 - 6.6.1.1 3.476e-204 647.0
DYD3_k127_909870_2 von Willebrand factor (vWF) type A domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002959 538.0
DYD3_k127_909870_3 Belongs to the FPG family K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009537 419.0
DYD3_k127_909870_4 Protoglobin - - - 0.000004913 56.0
DYD3_k127_909870_5 Phosphotransferase enzyme family - - - 0.00003237 53.0
DYD3_k127_917376_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008229 546.0
DYD3_k127_917376_1 TIGRFAM TRAP transporter solute receptor, TAXI family K07080 - - 0.00000000000000000000000000000000000000000000000000000001647 212.0
DYD3_k127_932166_0 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006439 278.0
DYD3_k127_932166_1 reductase K00068,K03366 - 1.1.1.140,1.1.1.304,1.1.1.76 0.0000000000000000000000000000000000000000000000000000000002449 212.0
DYD3_k127_932166_2 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000001551 211.0
DYD3_k127_932166_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K01759 - 4.4.1.5 0.000000000000000000000000000000000003325 142.0
DYD3_k127_932166_4 Cupin 2, conserved barrel domain protein - - - 0.000000000000000003565 94.0
DYD3_k127_932166_5 L-phenylalanine transmembrane transporter activity K01995,K01998 - - 0.0000002049 61.0
DYD3_k127_935813_0 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001864 329.0
DYD3_k127_935813_1 Participates in transcription elongation, termination and antitermination K02601 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001097 265.0
DYD3_k127_935813_2 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.000000000000000000000000000000000000000000000000000000000009216 209.0
DYD3_k127_935813_3 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.000000000000000000000000000000000000000223 151.0
DYD3_k127_935813_4 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.0000000000000000000000000113 115.0
DYD3_k127_935813_5 Ribosomal protein L33 K02913 - - 0.00000000000000000001925 91.0
DYD3_k127_935813_6 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000467 74.0
DYD3_k127_935813_7 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.00002288 53.0
DYD3_k127_939764_0 Belongs to the ALAD family K01698 GO:0000287,GO:0003674,GO:0003824,GO:0004655,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0030312,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.2.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004741 497.0
DYD3_k127_939764_1 Belongs to the precorrin methyltransferase family K13542 - 2.1.1.107,4.2.1.75 0.0000000000000000000000000000000001248 141.0
DYD3_k127_939764_3 Glycosyl transferase family 2 K00721 - 2.4.1.83 0.0000000000005758 77.0
DYD3_k127_939764_4 Transcriptional regulator - - - 0.000000000003408 72.0
DYD3_k127_943775_0 PFAM Methionine synthase, vitamin-B12 independent K00549 - 2.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007234 327.0
DYD3_k127_943775_1 HD domain - - - 0.0000000000000000000000000000000000000001041 166.0
DYD3_k127_946013_0 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001353 419.0
DYD3_k127_946013_1 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005887 321.0
DYD3_k127_946013_2 glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002421 267.0
DYD3_k127_946013_3 Bifunctional nuclease K03617,K08999 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000001677 213.0
DYD3_k127_961169_0 PFAM Glutamyl glutaminyl-tRNA synthetase, class Ic, catalytic K01886 - 6.1.1.18 7.587e-267 843.0
DYD3_k127_961169_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002705 506.0
DYD3_k127_961169_2 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 GO:0003674,GO:0003824,GO:0016740,GO:0016757 2.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003686 475.0
DYD3_k127_961169_3 [glutamate-ammonia-ligase] adenylyltransferase activity K00982 GO:0000166,GO:0000287,GO:0000820,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006521,GO:0006541,GO:0006542,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0008882,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0010565,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0017076,GO:0019222,GO:0019752,GO:0030554,GO:0031323,GO:0032553,GO:0032555,GO:0032559,GO:0033238,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046872,GO:0050789,GO:0050794,GO:0051171,GO:0062012,GO:0065007,GO:0070566,GO:0071704,GO:0080090,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.7.42,2.7.7.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 381.0
DYD3_k127_961169_4 PFAM Na Picotransporter K03324 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 376.0
DYD3_k127_961169_5 SMART Extracellular solute-binding protein, family 3 K02030 - - 0.000000000000000000000000000000000000000000000000000000000000003071 226.0
DYD3_k127_961169_6 Nitrogen regulatory protein P-II K04751,K04752 - - 0.00000000000000000000000000000000000000000001671 178.0
DYD3_k127_961169_7 PFAM Phosphoglycerate mutase K02226,K22305 - 3.1.3.3,3.1.3.73 0.000000000000000000000000000000007905 147.0
DYD3_k127_961169_8 COG0402 Cytosine deaminase and related metal-dependent hydrolases - - - 0.00007327 55.0
DYD3_k127_966594_0 Belongs to the TPP enzyme family K01576 - 4.1.1.7 1.692e-200 656.0
DYD3_k127_966594_1 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005259 413.0
DYD3_k127_966594_2 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0003674,GO:0003824,GO:0004325,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016020,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0040007,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0046148,GO:0046483,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051537,GO:0051540,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.000000000000000000000000000000000003692 154.0
DYD3_k127_969259_0 methylated-DNA-[protein]-cysteine S-methyltransferase activity K00567 GO:0003674,GO:0003824,GO:0003908,GO:0006139,GO:0006259,GO:0006281,GO:0006304,GO:0006307,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0009987,GO:0016740,GO:0016741,GO:0032259,GO:0033554,GO:0034641,GO:0035510,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 2.1.1.63 0.0000000000000000000000000000000000000000000005552 172.0
DYD3_k127_969259_1 Peptidase family M50 - - - 0.000000000000000000000000000000000000000000001995 175.0
DYD3_k127_969259_2 COG NOG14600 non supervised orthologous group - - - 0.0000000000000000000000000000004197 122.0
DYD3_k127_969259_3 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.000000000000000006878 85.0
DYD3_k127_969259_5 PFAM Integrase - - - 0.0000008003 57.0
DYD3_k127_969259_6 - - - - 0.0000016 53.0
DYD3_k127_983152_0 PFAM L-carnitine dehydratase bile acid-inducible protein F - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004021 381.0
DYD3_k127_983152_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006815 329.0
DYD3_k127_983152_2 Predicted membrane protein (DUF2339) - - - 0.0000000000000000000000000000000000000000000000004589 199.0
DYD3_k127_983152_3 Putative stress-induced transcription regulator - - - 0.0000000000000000000000000000000000000000000002045 175.0
DYD3_k127_983152_4 YceI-like domain - - - 0.0000000000000000000000000000022 129.0
DYD3_k127_983152_5 Cytidylate kinase K00945 - 2.7.4.25 0.0000000000000000004198 89.0
DYD3_k127_984241_0 PFAM aldo keto reductase K05882 - 1.1.1.91 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008021 469.0
DYD3_k127_984241_1 Alcohol dehydrogenase zinc-binding domain protein K07119 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006154 434.0
DYD3_k127_984241_2 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007006 344.0