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Overview

ID MAG00963
Name DYD3_bin.36
Sample SMP0027
Taxonomy
Kingdom Archaea
Phylum Thermoplasmatota
Class SW-10-69-26
Order JACQPN01
Family JAJPHT01
Genus JAJPHT01
Species
Assembly information
Completeness (%) 68.06
Contamination (%) 2.97
GC content (%) 71.0
N50 (bp) 4,765
Genome size (bp) 2,870,440

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes1949

Gene name Description KEGG GOs EC E-value Score Sequence
DYD3_k127_1036560_0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K15975 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001582 385.0
DYD3_k127_1049489_0 Copper resistance protein D K07245,K14166 - - 0.0000000000000000001575 103.0
DYD3_k127_1049489_1 - - - - 0.0000000000006437 79.0
DYD3_k127_1049489_2 Copper binding proteins, plastocyanin/azurin family K00368 - 1.7.2.1 0.0000000002828 68.0
DYD3_k127_108338_0 Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) K01823 - 5.3.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002541 307.0
DYD3_k127_108338_1 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000006779 240.0
DYD3_k127_1101206_0 Toprim domain K02316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008994 369.0
DYD3_k127_1101206_1 Belongs to the UPF0235 family K09131 - - 0.000000000000000000008475 96.0
DYD3_k127_1108330_0 Glycosyl transferase family group 2 - - - 0.0000000000003878 79.0
DYD3_k127_1108330_1 protein conserved in archaea - - - 0.00000001067 63.0
DYD3_k127_1108330_2 protein conserved in archaea - - - 0.00007829 52.0
DYD3_k127_113102_0 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000001405 213.0
DYD3_k127_113102_1 COG0681 Signal peptidase I K13280 - 3.4.21.89 0.0003666 52.0
DYD3_k127_1146586_0 TIGRFAM glutamine synthetase, type I K01915 - 6.3.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004754 307.0
DYD3_k127_1146586_1 Dienelactone hydrolase family K06999 - - 0.000000000000000000000000000000000000000000000000000000000003209 214.0
DYD3_k127_1146586_2 FtsX-like permease family K02003,K02004,K05685,K09810 - - 0.000000000000000000000000000000000000000000000000000000003816 207.0
DYD3_k127_1146586_3 SnoaL-like polyketide cyclase - - - 0.000000000000001522 91.0
DYD3_k127_1146586_4 - - - - 0.000000001969 70.0
DYD3_k127_1146586_5 FtsX-like permease family K02004 - - 0.0009088 51.0
DYD3_k127_1149866_0 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.0000000000000008969 87.0
DYD3_k127_1149866_1 heme-binding sites - - - 0.0000000000006809 79.0
DYD3_k127_1152200_0 Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX - - - 0.000000000000000000000000000001614 127.0
DYD3_k127_1152200_1 protein localization to endoplasmic reticulum - - - 0.00000000000000000000000003075 115.0
DYD3_k127_1152200_2 Tetratricopeptide repeat - - - 0.0000000000000000000006294 112.0
DYD3_k127_1164622_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K13924 - 2.1.1.80,3.1.1.61 0.000000000000000000000000000000000000000000000000000000000001686 232.0
DYD3_k127_1164622_1 MatE - - - 0.000000000000000000000000000000000000000000000002386 185.0
DYD3_k127_1181100_0 Psort location Cytoplasmic, score 8.87 K09384 - - 1.154e-220 701.0
DYD3_k127_1181100_1 Has ATPase and non-specific DNA-binding activities K07456 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002044 480.0
DYD3_k127_1181100_2 of the PP-loop superfamily K06864 - - 0.000000000000000000000000000000000000000000000000000000000000000169 230.0
DYD3_k127_1181100_3 COG0179 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) - - - 0.000000000000000000000000000000000000000000000000000208 195.0
DYD3_k127_1181100_4 Patatin-like phospholipase - - - 0.00000000000000000000000000000000000000001138 164.0
DYD3_k127_1181100_5 Has ATPase and non-specific DNA-binding activities K07456 - - 0.000000000000003992 76.0
DYD3_k127_1181100_6 - - - - 0.00000000006074 72.0
DYD3_k127_1181100_7 - - - - 0.0002093 49.0
DYD3_k127_1181100_8 PFAM Polyketide cyclase dehydrase - - - 0.0007059 49.0
DYD3_k127_1203075_0 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000001256 174.0
DYD3_k127_1203075_1 Glycogen debranching enzyme - - - 0.00000000002876 75.0
DYD3_k127_1204448_0 HTH-type transcriptional regulatory protein K07728 - - 0.0006514 49.0
DYD3_k127_1206313_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000968 419.0
DYD3_k127_1206313_1 Multi-copper - - - 0.0000000000000000000000000000000000000000000000000000000000004342 226.0
DYD3_k127_1206313_2 Belongs to the eIF-2B alpha beta delta subunits family - - - 0.00000000000000000000000000000009213 138.0
DYD3_k127_1242720_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000451 425.0
DYD3_k127_1242720_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0016020,GO:0030312,GO:0032991,GO:0033554,GO:0040007,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:0071944,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 0.00000000000000000000000000000000000000000000000000000000000000000000001613 254.0
DYD3_k127_1249532_0 - - - - 0.00000000000000000000000000000000004371 150.0
DYD3_k127_1249532_2 - - - - 0.000001626 59.0
DYD3_k127_126301_0 Histidine kinase - - - 0.0000000000000000000000000000000000000001453 165.0
DYD3_k127_126301_1 VIT family - - - 0.000000000000000000000000000000001281 135.0
DYD3_k127_126301_2 Bacterio-opsin activator HTH domain-containing protein K06930 - - 0.000000000000419 75.0
DYD3_k127_126301_3 protein phosphatase 2C domain protein - - - 0.0000002459 63.0
DYD3_k127_130016_0 Acyl-CoA dehydrogenase, C-terminal domain K00248,K00249 - 1.3.8.1,1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003932 336.0
DYD3_k127_130016_1 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.00000000001769 77.0
DYD3_k127_1319435_0 PFAM ABC transporter related K01990 - - 0.00000000000000000000000000000000000000000000000000000002701 202.0
DYD3_k127_1319435_1 membrane - - - 0.0000000000000000000000000000000000000000000009176 175.0
DYD3_k127_1319435_2 transmembrane transport K01992 - - 0.0000000000000000001645 102.0
DYD3_k127_1319435_3 P-type ATPase K01533,K17686 - 3.6.3.4,3.6.3.54 0.00000000005553 64.0
DYD3_k127_1320950_0 Glycosyltransferase Family 4 K00743 - 2.4.1.87 0.0000000000000000000000000000000005564 146.0
DYD3_k127_1320950_1 Glycosyl transferase family 21 - - - 0.0000000000000423 84.0
DYD3_k127_1322588_0 COG0475 Kef-type K transport systems, membrane components K03455 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003652 390.0
DYD3_k127_1322588_1 Belongs to the FPP GGPP synthase family K13787 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000000000000001224 216.0
DYD3_k127_1322588_2 Asparaginase K13051 - 3.4.19.5 0.00000000000000000000000000000000000000000000000000001566 201.0
DYD3_k127_1322588_3 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.000000000000000000000000000009412 128.0
DYD3_k127_1322588_4 Belongs to the peptidase S51 family K13282 - 3.4.15.6 0.0000000000000000000002613 109.0
DYD3_k127_1322588_5 Protein of unknown function (DUF1294) - - - 0.000000000002916 71.0
DYD3_k127_1322588_6 Archaeal transcriptional regulator TrmB - - - 0.000000000003498 78.0
DYD3_k127_1333303_0 Transport permease protein K01992,K18233 - - 0.000000000000000000000000000000000000000000000000000000000000000002369 241.0
DYD3_k127_1333303_1 daunorubicin resistance ABC transporter K01990 - - 0.00000000000000000000000000000000000000001887 156.0
DYD3_k127_1333303_2 Belongs to the DEAD box helicase family K11927 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008026,GO:0008104,GO:0008150,GO:0008186,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0033036,GO:0035770,GO:0036464,GO:0042623,GO:0043186,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044444,GO:0044464,GO:0045495,GO:0051179,GO:0060293,GO:0070035,GO:0140098,GO:1990904 3.6.4.13 0.00000133 54.0
DYD3_k127_1339029_0 DNA helicase - - - 0.000000000000000000000000000000000000000000002254 186.0
DYD3_k127_1339029_1 Membrane - - - 0.000000000000000006471 94.0
DYD3_k127_1339029_2 - - - - 0.00000004765 57.0
DYD3_k127_1352472_0 Phosphate uptake regulator - - - 0.0000000000000000000000000000000000000000000000000000000001594 218.0
DYD3_k127_1352472_1 Cytochrome c-type biogenesis protein K02198 - - 0.0000000000000000000000000000000000000000000002077 190.0
DYD3_k127_1361696_0 synthase K16167 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000517 296.0
DYD3_k127_1361696_1 cation diffusion facilitator family transporter K16264 GO:0000041,GO:0003674,GO:0005215,GO:0005385,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006829,GO:0008150,GO:0008324,GO:0015075,GO:0015318,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0044464,GO:0046873,GO:0046915,GO:0051179,GO:0051234,GO:0055085,GO:0070838,GO:0071577,GO:0071944,GO:0072509,GO:0072511,GO:0098655,GO:0098660,GO:0098662 - 0.000000000000000000000000000000000000000000000000000000000000000000000000001461 265.0
DYD3_k127_1361696_2 Isoprenylcysteine carboxyl methyltransferase K16168 - - 0.00000000000000000000000000000000000223 144.0
DYD3_k127_1375894_0 Sarcosine oxidase K00303 - 1.5.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009433 399.0
DYD3_k127_1375894_1 2Fe-2S iron-sulfur cluster binding domain K00302 - 1.5.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000002464 264.0
DYD3_k127_1375894_2 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0000000000000000000000001194 115.0
DYD3_k127_1375894_3 phosphorelay signal transduction system - - - 0.00000000000000001334 87.0
DYD3_k127_1375894_4 Sarcosine oxidase K00303 - 1.5.3.1 0.00000000000002161 86.0
DYD3_k127_1375894_5 Universal stress protein - - - 0.000003249 55.0
DYD3_k127_1388461_0 oligosaccharyl transferase activity - - - 0.000000000000000000000000000000000000000000000004837 199.0
DYD3_k127_1393316_0 Regulatory subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Stabilizes and modulates the activity of the small subunit, increasing the rate of DNA synthesis, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair K18882 - - 0.00000000000000000000000000000000000000000000000000000000000001836 239.0
DYD3_k127_1393316_1 Molybdenum cofactor synthesis domain - - - 0.000000000000000000000000000000000008933 146.0
DYD3_k127_1393316_2 LVIVD repeat - - - 0.0000000000000006491 91.0
DYD3_k127_1398282_0 ATPase which is responsible for recognizing, binding, unfolding and translocation of substrate proteins into the archaeal 20S proteasome core particle. Is essential for opening the gate of the 20S proteasome via an interaction with its C- terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. Unfolding activity requires energy from ATP hydrolysis, whereas ATP binding alone promotes ATPase-20S proteasome association which triggers gate opening, and supports translocation of unfolded substrates K03420 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 488.0
DYD3_k127_1398282_1 - - - - 0.000000007194 65.0
DYD3_k127_1408517_0 Cytochrome oxidase assembly protein - - - 0.000000000000000003561 94.0
DYD3_k127_1429205_0 Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding K04798 - - 0.000000000000000000002938 102.0
DYD3_k127_1429205_1 WD40 repeat-like protein - - - 0.00004787 56.0
DYD3_k127_1435994_0 protein with a von Willebrand factor type A (vWA) domain K07114 - - 0.00000004721 63.0
DYD3_k127_1444525_0 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate K08289 - 2.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 527.0
DYD3_k127_1444525_1 PFAM Beta-eliminating lyase K01620 - 4.1.2.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001291 406.0
DYD3_k127_1444525_2 2OG-Fe(II) oxygenase superfamily - - - 0.0003385 50.0
DYD3_k127_1448274_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004391 552.0
DYD3_k127_1448274_1 Integral membrane protein DUF92 - - - 0.0000000000000000000000000008086 123.0
DYD3_k127_1452559_0 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000003145 194.0
DYD3_k127_1452559_1 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000002361 148.0
DYD3_k127_1452559_2 Acetyltransferase (GNAT) domain - - - 0.0000897 53.0
DYD3_k127_145889_0 Transcriptional regulator - - - 0.0000000000000000005878 99.0
DYD3_k127_145889_1 - - - - 0.000000000000005944 87.0
DYD3_k127_145889_2 Histidine kinase - - - 0.000000000001211 78.0
DYD3_k127_145889_3 protein conserved in archaea - - - 0.00000002008 64.0
DYD3_k127_1467633_0 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000004936 179.0
DYD3_k127_1467633_1 - - - - 0.00000000000000000000000000000000000000000002255 173.0
DYD3_k127_1467633_2 - - - - 0.00000000004356 74.0
DYD3_k127_1469493_0 LVIVD repeat - - - 0.00000000000000000000000000000000000000002638 168.0
DYD3_k127_1469493_1 COG0477 Permeases of the major facilitator superfamily - - - 0.0000000000000000000000000000001515 140.0
DYD3_k127_1469493_2 DnaJ domain - - - 0.000001713 60.0
DYD3_k127_1471834_0 Butyryl-CoA dehydrogenase K16173 - 1.3.99.32 0.000000000000000000000000000000000000000000000000000000001493 207.0
DYD3_k127_1471834_1 COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000000000006057 166.0
DYD3_k127_1471834_2 Diguanylate cyclase phosphodiesterase with PAS PAC sensor(S) - - - 0.000000000000000009088 94.0
DYD3_k127_148196_0 COG1520 FOG WD40-like repeat - - - 0.000006082 55.0
DYD3_k127_1509720_0 Belongs to the heme-copper respiratory oxidase family K15408 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 480.0
DYD3_k127_1509720_1 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003913 343.0
DYD3_k127_1509720_2 COG1622 Heme copper-type cytochrome quinol oxidases, subunit 2 K02275 - 1.9.3.1 0.000000000000000000000000002492 123.0
DYD3_k127_1509720_3 HxlR family - - - 0.0000000000000000000000004361 110.0
DYD3_k127_1514961_0 Mediates influx of magnesium ions K03284 - - 0.00000000000000000000000000000000000000000000000000000000006583 215.0
DYD3_k127_1514961_1 Domain of unknown function (DUF4162) K01990,K18232 - - 0.0000000000000000000000000000000000000000000002731 179.0
DYD3_k127_152030_0 Glyceraldehyde-3-phosphate dehydrogenase K00150 - 1.2.1.59 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000311 318.0
DYD3_k127_152030_1 lyase activity K01387,K03301 - 3.4.24.3 0.0000000298 68.0
DYD3_k127_152030_2 Kelch motif - - - 0.00004995 55.0
DYD3_k127_1530196_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 2.354e-232 752.0
DYD3_k127_1545433_0 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000003764 223.0
DYD3_k127_1545433_1 Transposase DDE domain K07492 - - 0.000000000000000000000000000000000000000000001442 169.0
DYD3_k127_1545433_2 Putative transposase of IS4/5 family (DUF4096) - - - 0.00000000000000000000000000000000946 132.0
DYD3_k127_1545433_3 General stress protein K06884 - - 0.0000000001627 66.0
DYD3_k127_1545433_4 Uncharacterized protein conserved in archaea (DUF2240) - - - 0.000000009369 67.0
DYD3_k127_1545433_5 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K11527 - 2.7.13.3 0.0000006521 59.0
DYD3_k127_1545433_6 - - - - 0.0001932 53.0
DYD3_k127_1545433_7 HTH DNA binding domain - - - 0.0006659 52.0
DYD3_k127_1549716_0 peptidyl-prolyl cis-trans isomerase K01802,K03775 - 5.2.1.8 0.000000000000000000000000000000000000000000000000002156 196.0
DYD3_k127_1549716_1 COG0023 Translation initiation factor 1 (eIF-1 SUI1) and related proteins K03113 - - 0.00000000000000002676 90.0
DYD3_k127_1549997_0 SNF2 family N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000005311 210.0
DYD3_k127_1549997_1 - - - - 0.00000000000000000000000000000000000000001115 171.0
DYD3_k127_1549997_2 transcriptional - - - 0.0000000000000002908 93.0
DYD3_k127_1549997_3 SMART Toprim sub domain protein - - - 0.0000000000000182 83.0
DYD3_k127_1549997_4 FHA domain containing protein - - - 0.000000004675 66.0
DYD3_k127_1555819_0 signal transduction histidine kinase - - - 0.00000000000000000000000002669 122.0
DYD3_k127_156460_0 Dihydroorotate dehydrogenase K00226,K00254 - 1.3.5.2,1.3.98.1 0.000000000000000000000000000000000000000000000002465 178.0
DYD3_k127_1579028_0 Exchanges the guanine residue with 7-cyano-7- deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D- loop) of archaeal tRNAs K18779 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046116,GO:0046483,GO:0055086,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.48 0.00000000000000000000000000000000000002069 147.0
DYD3_k127_1579028_1 protein conserved in archaea - - - 0.0000000000004413 82.0
DYD3_k127_1587109_0 PFAM aspartate ornithine carbamoyltransferase carbamoyl-P binding domain K00609 - 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006152 338.0
DYD3_k127_1587109_1 ABC transporter, ATP-binding protein K02028,K17076 - 3.6.3.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002945 308.0
DYD3_k127_1587109_2 amino acid ABC transporter K02029 - - 0.0000000000000000000000000000000000000000008998 176.0
DYD3_k127_1587109_3 Involved in allosteric regulation of aspartate carbamoyltransferase K00610 - - 0.00000000000000000000000000000000000000002322 172.0
DYD3_k127_1587109_4 extracellular solute-binding protein, family 3 K02030 - - 0.00000000000000000000000000000000002505 145.0
DYD3_k127_1599781_0 Threonine aldolase K01620 - 4.1.2.48 0.000000000000000000000000000000000000000000000000000000000000000000000001339 254.0
DYD3_k127_1599781_1 Involved in the catabolism of quinolinic acid (QA) K00767 - 2.4.2.19 0.00000000000000000000000000000000000000000000000000000000000000007707 231.0
DYD3_k127_1606701_0 Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase) - - - 0.00000000000000000000000000000000000002966 155.0
DYD3_k127_1606701_1 PFAM FAD linked oxidase domain protein - - - 0.0000000000000000000000000000000103 128.0
DYD3_k127_1606701_2 ABC-2 type transporter K01992 - - 0.00000001486 66.0
DYD3_k127_161460_0 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001463 272.0
DYD3_k127_161460_1 Pfam Polyketide cyclase dehydrase and lipid transport - - - 0.0000000000000000000005013 106.0
DYD3_k127_161460_2 metallopeptidase activity - - - 0.000000000000000893 89.0
DYD3_k127_161460_3 PFAM Kelch motif - - - 0.000000000000009174 78.0
DYD3_k127_1626393_0 Ferredoxin - - - 0.000000000000009548 79.0
DYD3_k127_1626393_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.000000004758 70.0
DYD3_k127_1636064_0 COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes K00382 - 1.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002361 456.0
DYD3_k127_1640944_0 Carbon-nitrogen hydrolase K13566 - 3.5.1.3 0.000000837 61.0
DYD3_k127_1645428_0 hydrolase (HAD superfamily) K07025 - - 0.0000000000000001337 91.0
DYD3_k127_1645428_1 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000003383 78.0
DYD3_k127_1645428_2 - - - - 0.00000002635 61.0
DYD3_k127_1656805_0 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000005978 184.0
DYD3_k127_1657592_0 short-chain dehydrogenase reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003445 304.0
DYD3_k127_1657592_1 LVIVD repeat - - - 0.00000000000004578 84.0
DYD3_k127_1657592_2 PFAM Glycosyl transferase, group 1 - - - 0.0000000003602 70.0
DYD3_k127_1669505_0 Serine protease with a broad substrate specificity K17734 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005488,GO:0005509,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0046872,GO:0070011,GO:0071704,GO:0140096,GO:1901564 - 0.0000000000000000000000000000000000000000000000000000000000000000522 243.0
DYD3_k127_1669505_1 peroxiredoxin activity - - - 0.00000000000000000000000000000000000000000000000004518 184.0
DYD3_k127_1669505_2 PFAM Glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.0000000000000000000000000000000006187 141.0
DYD3_k127_1669505_3 exonuclease K07502 - - 0.000000000000000000000000001158 117.0
DYD3_k127_1696934_0 HELICc2 K10844 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000001743 263.0
DYD3_k127_1700584_0 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000001106 241.0
DYD3_k127_1700584_1 Belongs to the peptidase S8 family - - - 0.00000000000000000000000000000000000000000000000000006421 204.0
DYD3_k127_1700584_2 Histidine kinase - - - 0.0000000000000000000000000000000000000000007905 181.0
DYD3_k127_1700584_3 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000005048 153.0
DYD3_k127_1700584_4 CoA-binding K06929 - - 0.0000000000000000000000000000000000001448 154.0
DYD3_k127_1700584_5 Protein of unknown function (DUF429) - - - 0.00000000000000000000000000000006646 132.0
DYD3_k127_1700584_6 HAD-hyrolase-like K06019 - 3.6.1.1 0.0000000000000000000000000002894 123.0
DYD3_k127_1700584_7 protein conserved in archaea - - - 0.00000000000000001082 94.0
DYD3_k127_1702787_0 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000001017 205.0
DYD3_k127_1702787_1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01007 - 2.7.9.2 0.00000000000000000000000000123 125.0
DYD3_k127_1702787_2 Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine K03433 - 3.4.25.1 0.000000000001211 78.0
DYD3_k127_1702787_3 ThiF family - - - 0.00000000002157 75.0
DYD3_k127_1702787_4 Transport permease protein K01992 - - 0.0000009784 61.0
DYD3_k127_1712236_0 TIGRFAM methylmalonyl-CoA mutase, large subunit K01848 - 5.4.99.2 7.054e-221 698.0
DYD3_k127_1712236_1 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000008103 229.0
DYD3_k127_1712236_2 type II secretion system K07333 - - 0.000000000000000000000000000000000000000000000000000001239 213.0
DYD3_k127_1712236_3 COG0467 RecA-superfamily ATPases implicated in signal transduction - - - 0.00000000001024 75.0
DYD3_k127_1712236_4 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.0000008647 57.0
DYD3_k127_1712236_5 Lamin Tail Domain - - - 0.0008156 53.0
DYD3_k127_1715082_0 Sodium/hydrogen exchanger family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000455 282.0
DYD3_k127_1715082_1 LVIVD repeat - - - 0.00004887 55.0
DYD3_k127_1723920_0 Cyanophycin synthetase - - - 1.197e-307 967.0
DYD3_k127_1723920_1 Peptidase family S51 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000227 269.0
DYD3_k127_1723920_2 Domain of unknown function (DUF892) - - - 0.0000000000000000000298 102.0
DYD3_k127_1723920_3 asparaginase K01424,K13051 - 3.4.19.5,3.5.1.1 0.0000000002855 64.0
DYD3_k127_1743419_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 2.501e-218 689.0
DYD3_k127_1743419_1 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K17884 - 2.7.8.39,2.7.8.5 0.00000000000000000000000000000000000000000001471 169.0
DYD3_k127_1743419_2 Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates K18532 - 2.7.4.3 0.00000000000000000000000000005382 124.0
DYD3_k127_1743419_3 Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A - - - 0.00000000004931 74.0
DYD3_k127_1744367_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004593 393.0
DYD3_k127_1744367_1 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.00000000000000000000000000000000000000000000000000003851 206.0
DYD3_k127_1744367_2 - - - - 0.0000000000000000000000002331 115.0
DYD3_k127_1747614_0 Glycosyltransferases involved in cell wall biogenesis K13693 - 2.4.1.266 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008223 320.0
DYD3_k127_1747614_1 Winged helix-turn-helix DNA-binding - - - 0.00000001424 67.0
DYD3_k127_1758860_0 ABC-2 type transporter K01992 - - 0.0000000002837 72.0
DYD3_k127_1758860_1 Belongs to the UPF0200 family - - - 0.000000001512 64.0
DYD3_k127_1763805_0 Domain of unknown function (DUF4082) - - - 0.0001751 55.0
DYD3_k127_1771723_0 - - - - 0.00000000000002573 85.0
DYD3_k127_1773795_0 Peptidase A24A, prepilin type IV K07991 - 3.4.23.52 0.000000000000000000006354 102.0
DYD3_k127_1775124_0 PFAM type II secretion system protein E K07332 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001818 483.0
DYD3_k127_1775124_1 Dehydrogenase K00052 - 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002063 295.0
DYD3_k127_1775124_2 protein conserved in archaea - - - 0.000004788 57.0
DYD3_k127_1787755_0 protein conserved in archaea - - - 0.000001251 63.0
DYD3_k127_1797452_0 COG1404 Subtilisin-like serine proteases K14645 GO:0005575,GO:0005576 - 0.0000000000000000000000000000000000000000000000000000000000002831 232.0
DYD3_k127_1797452_1 Diguanylate cyclase phosphodiesterase with PAS PAC - - - 0.00000000000000000000000000000000000000000000000002861 186.0
DYD3_k127_1797452_2 Involved in the binding of tRNA to the ribosomes K02946 - - 0.000000000612 63.0
DYD3_k127_1814426_0 General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation K03120 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001168 261.0
DYD3_k127_1814426_1 General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation K03120 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008096 258.0
DYD3_k127_1814426_2 Metal-dependent hydrolase - - - 0.000000000000000000000000000000000000000000000000005054 194.0
DYD3_k127_1814426_3 ZPR1-related zinc finger protein K06874 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000006134 171.0
DYD3_k127_1814426_4 regulator of chromosome condensation, RCC1 - - - 0.0000000000000000000000000002076 130.0
DYD3_k127_1814426_5 Pfam:DUF552 K09152 - - 0.000000000000000000004326 104.0
DYD3_k127_1814426_6 PFAM TatD-related deoxyribonuclease K07049 - - 0.00004165 46.0
DYD3_k127_1822561_0 X-Pro dipeptidyl-peptidase (S15 family) - - - 0.0000000000000000000000000000000000000000000000000000003673 211.0
DYD3_k127_1822561_1 Belongs to the peptidase S8 family K14645 GO:0005575,GO:0005576 - 0.0000000000000000000000000000000000000000000000000004356 207.0
DYD3_k127_182804_0 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.00000000000000000000000000000000000000000000000000000000000000000001891 249.0
DYD3_k127_1828092_0 Glutamine - - - 0.0000000003647 70.0
DYD3_k127_1828092_1 Inter-alpha-trypsin inhibitor heavy chain - - - 0.000000002438 69.0
DYD3_k127_1828092_2 regulatory protein, arsR K13771 - - 0.000001791 61.0
DYD3_k127_1828092_3 Aldehyde dehydrogenase family K00294 - 1.2.1.88 0.0009687 42.0
DYD3_k127_1842971_0 B12 binding domain K00548 - 2.1.1.13 0.0 1420.0
DYD3_k127_1842971_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 361.0
DYD3_k127_1842971_2 PFAM Methylenetetrahydrofolate reductase - - - 0.00000000000000000000000000004022 134.0
DYD3_k127_1843194_0 Non-ribosomal peptide synthetase modules and related proteins - - - 1.105e-210 680.0
DYD3_k127_1847532_0 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005836 312.0
DYD3_k127_1847532_1 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000007219 179.0
DYD3_k127_1847532_2 COG0500 SAM-dependent methyltransferases - - - 0.0000000000000000000003776 104.0
DYD3_k127_1847532_3 Belongs to the peptidase S8 family - - - 0.000000000000104 82.0
DYD3_k127_1854504_0 - - - - 0.000000007763 68.0
DYD3_k127_1854504_1 Sulfatase - - - 0.00004162 56.0
DYD3_k127_1858343_0 acyl-CoA dehydrogenase K00248 - 1.3.8.1 0.00000000000000000000000000000000000000000000000000000000000000000003988 239.0
DYD3_k127_1858343_1 xylanase chitin deacetylase - - - 0.00000000000000000000000000000000000000000000000006276 192.0
DYD3_k127_1871658_0 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009034 309.0
DYD3_k127_1871658_1 Methyltransferase involved in ribosomal biogenesis. Specifically catalyzes the N1-methylation of the pseudouridine corresponding to position 914 in M.jannaschii 16S rRNA K14568 GO:0000154,GO:0000462,GO:0001510,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0019843,GO:0022613,GO:0030490,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042274,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070037,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0140098,GO:0140102,GO:1901360,GO:1901363 2.1.1.260 0.000000000000000000000000000000000000000000000004295 186.0
DYD3_k127_1871658_2 PFAM CBS domain containing protein - - - 0.00000000000000000000000000000000000004154 161.0
DYD3_k127_1871658_3 PFAM GHMP kinase K06982 - 2.7.1.169 0.0000000000000000000000000000000000003081 162.0
DYD3_k127_1871658_4 - - - - 0.00000000000000001831 88.0
DYD3_k127_1906438_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 1.527e-236 757.0
DYD3_k127_1906438_1 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003563 296.0
DYD3_k127_1906438_2 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007384 270.0
DYD3_k127_1906438_3 ABC-2 family transporter protein K01992 - - 0.00000000008654 75.0
DYD3_k127_1906438_4 ABC-type transport system involved in multi-copper enzyme maturation permease component K01992 - - 0.000000003706 70.0
DYD3_k127_1906438_5 protein conserved in archaea - - - 0.0003164 53.0
DYD3_k127_1913125_0 Catalyzes the phosphorylation of (R)-mevalonate (MVA) to (R)-mevalonate 5-phosphate (MVAP). Functions in the mevalonate (MVA) pathway leading to isopentenyl diphosphate (IPP), a key precursor for the biosynthesis of isoprenoid compounds such as archaeal membrane lipids K00869 GO:0003674,GO:0003824,GO:0004496,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006084,GO:0006139,GO:0006163,GO:0006629,GO:0006637,GO:0006644,GO:0006720,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008202,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009150,GO:0009240,GO:0009259,GO:0009987,GO:0016125,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019287,GO:0019637,GO:0019693,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0035383,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046490,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901135,GO:1901360,GO:1901564,GO:1901576,GO:1901615 2.7.1.36 0.000000000000000000000000000000000000000000000000000000000005205 215.0
DYD3_k127_1913125_1 Catalyzes the formation of isopentenyl diphosphate (IPP), the building block of all isoprenoids K06981 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006629,GO:0006720,GO:0006721,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016114,GO:0016740,GO:0016772,GO:0016776,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0102043,GO:1901576 2.7.4.26 0.0000000000000000000000000000000001234 150.0
DYD3_k127_1915368_0 CoA-transferase family III K01796 - 5.1.99.4 0.00000000000000000000000000000000000000000000000000000000000000000000000001469 263.0
DYD3_k127_1915368_1 Rieske (2fe-2S) K00499 - 1.14.15.7 0.00000000000000000000000000000000000000000000000000000000117 219.0
DYD3_k127_1915368_2 - - - - 0.0000004604 56.0
DYD3_k127_1921686_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001926 592.0
DYD3_k127_1921686_1 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K15778 - 5.4.2.2,5.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003993 427.0
DYD3_k127_1921686_2 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B gamma epsilon subunits K00966 - 2.7.7.13 0.0000000000000000000000000000000000000000000000000000000000000001325 239.0
DYD3_k127_1921686_3 PFAM 4Fe-4S ferredoxin, iron-sulfur binding - - - 0.00000000000000000000000000000008477 128.0
DYD3_k127_1921686_4 Belongs to the peptidase M24B family K01271 - 3.4.13.9 0.000000000000001719 81.0
DYD3_k127_1921686_5 - - - - 0.000000000003284 78.0
DYD3_k127_1921686_6 Glyoxalase-like domain - - - 0.0000003951 59.0
DYD3_k127_19245_0 Patatin-like phospholipase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008026 582.0
DYD3_k127_19245_1 PFAM alpha beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000002 200.0
DYD3_k127_19245_2 - - - - 0.000000000000000000000000000000000011 149.0
DYD3_k127_19245_3 - - - - 0.00000000000000000000000000000000002095 153.0
DYD3_k127_1927551_0 snoRNA binding domain, fibrillarin K14564 - - 0.0000000000000000000000000000000000000000000000000000000000000001064 236.0
DYD3_k127_1932616_0 cell adhesion involved in biofilm formation - - - 0.0001189 56.0
DYD3_k127_1932616_1 Alpha-L-rhamnosidase N-terminal domain - - - 0.0001225 56.0
DYD3_k127_1933374_0 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.0000000000000000000000000000006449 142.0
DYD3_k127_1933374_1 resolvase - - - 0.00000000001455 72.0
DYD3_k127_1936360_0 self proteolysis - - - 0.000000000000000000000000000000000000000000000000000000000006503 239.0
DYD3_k127_1936360_1 Tetratricopeptide repeat - - - 0.0002427 46.0
DYD3_k127_1949744_0 NmrA-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003695 542.0
DYD3_k127_1949744_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006108 411.0
DYD3_k127_1949744_2 Peptidase family M20/M25/M40 K01438,K05831 - 3.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000005159 267.0
DYD3_k127_1949744_3 PFAM TspO MBR family K05770 - - 0.00000000000000000000000000000000000000006741 166.0
DYD3_k127_1949744_4 DNA-binding transcription factor activity - - - 0.000000000000000000000000000000001673 142.0
DYD3_k127_1949744_5 - - - - 0.00000000000106 80.0
DYD3_k127_1949744_6 Integron-associated effector binding protein - - - 0.000002494 59.0
DYD3_k127_1949744_7 - - - - 0.0003034 50.0
DYD3_k127_1951831_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 339.0
DYD3_k127_1951831_1 Prephenate dehydrogenase chorismate mutase K00210 - 1.3.1.12 0.000000000000000000000000000000000000000000000000000000000009819 232.0
DYD3_k127_1951831_2 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 GO:0003674,GO:0003824,GO:0003866,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0071704,GO:1901576 2.5.1.19 0.000000000000000000000000000000000000000000000005387 178.0
DYD3_k127_1953480_0 Cys Met metabolism K01739,K01758 - 2.5.1.48,4.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003704 432.0
DYD3_k127_1953480_1 - - - - 0.00000002467 64.0
DYD3_k127_1953730_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 428.0
DYD3_k127_1953730_1 Papain family cysteine protease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 394.0
DYD3_k127_1953730_2 - - - - 0.000000000000000000000273 103.0
DYD3_k127_1962211_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit K02117 - 3.6.3.14,3.6.3.15 0.00000000000000000000000000000000000000000000000003322 183.0
DYD3_k127_1967685_0 Beta-Casp domain K07577 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001691 399.0
DYD3_k127_1967685_1 Predicted membrane protein (DUF2243) - - - 0.00000000000000000000000003381 115.0
DYD3_k127_1967685_2 Protein of unknown function DUF47 K07220 - - 0.0000000000000000000003027 103.0
DYD3_k127_1967685_3 Bifunctional nuclease K08999 - - 0.000000000000000000002592 100.0
DYD3_k127_1977759_0 Belongs to the peptidase S8 family K08651 - 3.4.21.66 0.00000000000000000000000000000000000000000000000000000000003656 222.0
DYD3_k127_1977759_1 NmrA-like family K00091 - 1.1.1.219 0.00000000000000000000000000000000632 141.0
DYD3_k127_1998449_0 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611,K09065,K13252 - 2.1.3.3,2.1.3.6,2.1.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000036 278.0
DYD3_k127_1998449_1 - - - - 0.000000000000000000000007241 115.0
DYD3_k127_1998449_2 Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats - - - 0.0000343 58.0
DYD3_k127_2012304_0 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 0.00000000000000000000000000000000000000000000000000000004987 205.0
DYD3_k127_2012304_1 WD-40 repeat - - - 0.00000000000001277 89.0
DYD3_k127_2015660_0 Zinc carboxypeptidase - - - 0.000000000000000000000003338 119.0
DYD3_k127_2015660_1 domain, Protein K11016 - - 0.000000000009605 76.0
DYD3_k127_2020061_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006161 322.0
DYD3_k127_2020061_1 Protein of unknown function (DUF1616) - - - 0.0000000000000000000000000000000000000000000000000005001 199.0
DYD3_k127_2020061_2 Protein of unknown function DUF58 - - - 0.0000000000000000000000003308 123.0
DYD3_k127_2020061_3 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.00000000000000000000378 108.0
DYD3_k127_2020061_4 PFAM Glycosyl transferase family 2 K00694 - 2.4.1.12 0.0000000000004052 80.0
DYD3_k127_2059230_0 DEAD DEAH box helicase domain protein K03724 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003577 394.0
DYD3_k127_2060093_0 DNA-dependent ATPase and 3'-5' DNA helicase that may be involved in repair of stalled replication forks K03726 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005827 466.0
DYD3_k127_2060093_1 DNA-dependent ATPase and 3'-5' DNA helicase that may be involved in repair of stalled replication forks K03726 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010501,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070035,GO:0071704,GO:0090304,GO:0140098,GO:1901360 - 0.0000000000000000000000000001689 122.0
DYD3_k127_2070401_0 Serine protease with a broad substrate specificity K17734 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005488,GO:0005509,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0046872,GO:0070011,GO:0071704,GO:0140096,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000001203 225.0
DYD3_k127_2070401_1 Matrixin - - - 0.00000000043 71.0
DYD3_k127_2071599_0 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 0.000000000000000000000000000000000001772 154.0
DYD3_k127_2074855_0 PFAM DoxX family protein K16937 - 1.8.5.2 0.000000000000000000000000000000000000000000000000000003502 199.0
DYD3_k127_2074855_1 - - - - 0.0000000000000000000000000006587 131.0
DYD3_k127_2074855_2 Phosphoesterase - - - 0.00000000000000000007297 105.0
DYD3_k127_2074855_3 Universal stress protein - - - 0.000000000000006084 84.0
DYD3_k127_2087299_0 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000003702 229.0
DYD3_k127_2087299_1 Proton-conducting membrane transporter K22169 - 1.5.98.3 0.0000000000000000000000000000000000000367 154.0
DYD3_k127_208901_0 reductase K00059 GO:0000166,GO:0003674,GO:0003824,GO:0004312,GO:0004316,GO:0005488,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0030497,GO:0032787,GO:0036094,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0072330,GO:0097159,GO:1901265,GO:1901363,GO:1901576 1.1.1.100 0.0000000000000000000000000000000000000000000000000000001464 206.0
DYD3_k127_208901_1 Involved in the binding of tRNA to the ribosomes K02946 - - 0.000000000000000000000000000000000000001498 153.0
DYD3_k127_208901_2 pyrroloquinoline quinone binding - - - 0.0000000000000001686 95.0
DYD3_k127_208901_3 Copper binding proteins, plastocyanin/azurin family - - - 0.000000001962 72.0
DYD3_k127_208901_4 haloacid dehalogenase - - - 0.00007197 55.0
DYD3_k127_2094301_0 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000000000000006855 102.0
DYD3_k127_2094301_1 Belongs to the glycosyl hydrolase 5 (cellulase A) family K01179,K19668 GO:0005575,GO:0005576 3.2.1.4,3.2.1.91 0.00007137 51.0
DYD3_k127_2097009_0 homocitrate synthase activity K01649 - 2.3.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003698 307.0
DYD3_k127_2097009_1 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703,K16792 - 4.2.1.114,4.2.1.33,4.2.1.35 0.0000000000000005578 88.0
DYD3_k127_2097823_0 Transporter associated domain K03699 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 423.0
DYD3_k127_2097823_1 CBS domain K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004558 351.0
DYD3_k127_2097823_10 MacB-like periplasmic core domain K02004 - - 0.0001038 55.0
DYD3_k127_2097823_11 Rhodanese Homology Domain - - - 0.0004578 51.0
DYD3_k127_2097823_2 Ppx/GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002043 353.0
DYD3_k127_2097823_3 Cytochrome P450 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003404 321.0
DYD3_k127_2097823_4 dTDP biosynthetic process K00560,K00943,K01585 GO:0000166,GO:0000287,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0004798,GO:0005488,GO:0005515,GO:0005524,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009129,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009161,GO:0009165,GO:0009173,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009218,GO:0009219,GO:0009221,GO:0009259,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0017076,GO:0018130,GO:0019001,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0019693,GO:0030554,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046044,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046872,GO:0046940,GO:0046983,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.1.1.45,2.7.4.9,4.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000009681 267.0
DYD3_k127_2097823_5 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.000000000000000000000000000000000000000000000000002927 195.0
DYD3_k127_2097823_6 Transposase - - - 0.0000000000000000000000000000000000000005875 161.0
DYD3_k127_2097823_7 AI-2E family transporter - - - 0.0000000000000000000000004915 119.0
DYD3_k127_2097823_8 Transcription factor zinc-finger K09981 - - 0.000000000000000000000002463 108.0
DYD3_k127_2097823_9 integrase family - - - 0.0000000001172 74.0
DYD3_k127_2104794_0 acetyltransferase component of pyruvate dehydrogenase complex K00627 - 2.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000007485 269.0
DYD3_k127_2104794_1 COG0500 SAM-dependent methyltransferases - - - 0.0000000000000000000000000000000000000002328 160.0
DYD3_k127_2104794_2 mechanosensitive ion channel - - - 0.00000000000000000042 96.0
DYD3_k127_2104794_3 membrane - - - 0.000003636 59.0
DYD3_k127_2109212_0 PFAM monooxygenase FAD-binding K20940 - 1.14.13.218 0.00000000000000000000000000000000000000000000003067 175.0
DYD3_k127_2109212_1 protein conserved in archaea - - - 0.0000001639 64.0
DYD3_k127_2135237_0 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.0000000000000000000000000000000008458 143.0
DYD3_k127_2135237_1 LVIVD repeat-containing protein - - - 0.0002171 48.0
DYD3_k127_2140560_0 COG0463 Glycosyltransferases involved in cell wall biogenesis K07027 - - 0.0000000000000000000000000000000000000000000000007136 187.0
DYD3_k127_2140560_1 Glycosyl transferases group 1 - - - 0.0001368 54.0
DYD3_k127_2154782_0 SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 K03049 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000005866 222.0
DYD3_k127_2154782_1 Belongs to the UPF0218 family K09735 - - 0.0000000000000000000000000002805 124.0
DYD3_k127_2154782_2 Belongs to the eukaryotic ribosomal protein eS31 family K02977 - - 0.00000000000000000231 85.0
DYD3_k127_2154782_3 Transcription elongation factor Spt4 K03050 - 2.7.7.6 0.000000000000001956 77.0
DYD3_k127_2154782_4 Belongs to the eukaryotic ribosomal protein eS24 family K02974 - - 0.00000000000008449 81.0
DYD3_k127_2168245_0 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003658 413.0
DYD3_k127_2168245_1 UbiA prenyltransferase family K04040 - 2.5.1.133,2.5.1.62 0.00000000000000000000000000000000000000000000000000000008706 208.0
DYD3_k127_2168245_2 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 GO:0003674,GO:0003824,GO:0004617,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006082,GO:0006520,GO:0006563,GO:0006564,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016020,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0030312,GO:0040007,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000003117 168.0
DYD3_k127_2168245_3 DNA binding protein - - - 0.00007517 55.0
DYD3_k127_2168245_4 DNA binding protein - - - 0.00007517 55.0
DYD3_k127_2184943_0 Amidohydrolase K07045 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004244 273.0
DYD3_k127_2184943_1 Carbon-nitrogen hydrolase - - - 0.000001185 57.0
DYD3_k127_2193943_0 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001737 387.0
DYD3_k127_2193943_1 homoserine dehydrogenase K00003 - 1.1.1.3 0.000000000000000000000000000000000000000000000000000162 201.0
DYD3_k127_2193943_2 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 - 2.7.1.39 0.000000000000000000000000000000001741 146.0
DYD3_k127_2193943_3 COG1651 Protein-disulfide isomerase - - - 0.00000000000000000000001328 109.0
DYD3_k127_2193943_4 amino acid-binding ACT domain protein - - - 0.0000000004744 66.0
DYD3_k127_2199188_0 acid phosphatase activity K22390 GO:0003674,GO:0003824,GO:0003993,GO:0005048,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005768,GO:0005794,GO:0005802,GO:0006109,GO:0006605,GO:0006626,GO:0006793,GO:0006796,GO:0006810,GO:0006839,GO:0006886,GO:0006996,GO:0007005,GO:0007006,GO:0008104,GO:0008150,GO:0008152,GO:0009507,GO:0009526,GO:0009536,GO:0009941,GO:0009987,GO:0012505,GO:0015031,GO:0015833,GO:0016043,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0017038,GO:0019222,GO:0030943,GO:0031410,GO:0031967,GO:0031975,GO:0031982,GO:0031984,GO:0033036,GO:0033218,GO:0033365,GO:0034613,GO:0042277,GO:0042578,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044422,GO:0044424,GO:0044429,GO:0044431,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0045040,GO:0045184,GO:0046907,GO:0050789,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0061024,GO:0065007,GO:0070585,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0072594,GO:0072655,GO:0072657,GO:0080090,GO:0090150,GO:0090151,GO:0097708,GO:0098791 - 0.00001166 57.0
DYD3_k127_220413_0 Acetyl-CoA acetyltransferase K00626,K00632 - 2.3.1.16,2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 452.0
DYD3_k127_220413_1 palmitoyl-(protein) hydrolase activity K06999 GO:0003674,GO:0003824,GO:0016787,GO:0016788,GO:0052689 - 0.000000000000000000000000000000000004626 150.0
DYD3_k127_220413_2 transcription factor, homolog of eukaryotic MBF1 K00571,K03627,K07332 - 2.1.1.72 0.000000001108 66.0
DYD3_k127_222740_0 tRNA methyltransferase complex GCD14 subunit K07442 - 2.1.1.219,2.1.1.220 0.00000000000000000000000000000000000000000008012 169.0
DYD3_k127_222740_1 Cytidylyltransferase-like K00952 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.7.1 0.00000000000000000000000000000000000000413 156.0
DYD3_k127_222740_2 Catalyzes the reversible interconversion of serine and glycine with a modified folate serving as the one-carbon carrier. Also exhibits a pteridine-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.000000000000000000000000000000005479 132.0
DYD3_k127_222740_3 Belongs to the CinA family K03742,K03743 - 3.5.1.42 0.0000000000000000000000000000003271 135.0
DYD3_k127_222740_4 Protease prsW family - - - 0.00000000000000000008695 101.0
DYD3_k127_222740_5 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.000001623 52.0
DYD3_k127_224883_0 Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation K03432 GO:0000502,GO:0005575,GO:0005622,GO:0005623,GO:0005839,GO:0019773,GO:0032991,GO:0044424,GO:0044464,GO:1902494,GO:1905368,GO:1905369 3.4.25.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 324.0
DYD3_k127_224883_1 Shwachman-Bodian-Diamond syndrome (SBDS) protein K14574 - - 0.0000000000000000000000000000000000000000000000000000000000000000000006849 244.0
DYD3_k127_224883_2 Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Confers strong poly(A) specificity to the exosome K03679 GO:0000178,GO:0000288,GO:0000291,GO:0000459,GO:0000460,GO:0000466,GO:0000467,GO:0000469,GO:0000956,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016072,GO:0016073,GO:0016074,GO:0016180,GO:0019222,GO:0019439,GO:0022613,GO:0031123,GO:0031125,GO:0031126,GO:0032991,GO:0034470,GO:0034472,GO:0034475,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0042254,GO:0043144,GO:0043170,GO:0043628,GO:0043928,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071034,GO:0071043,GO:0071051,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1902494,GO:1905354 - 0.00000000000000000000000000000000000000000000000000000000000001831 233.0
DYD3_k127_224883_3 negative regulation of DNA replication K19531 GO:0001738,GO:0002009,GO:0002165,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005886,GO:0006275,GO:0006323,GO:0006325,GO:0006333,GO:0006996,GO:0006997,GO:0006998,GO:0007275,GO:0007444,GO:0007552,GO:0007560,GO:0007610,GO:0007635,GO:0008104,GO:0008150,GO:0008156,GO:0009653,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010256,GO:0010556,GO:0010558,GO:0010605,GO:0012505,GO:0016020,GO:0016043,GO:0019219,GO:0019222,GO:0022607,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031497,GO:0032501,GO:0032502,GO:0033036,GO:0035239,GO:0035295,GO:0042048,GO:0042127,GO:0042221,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0045934,GO:0048513,GO:0048519,GO:0048523,GO:0048563,GO:0048569,GO:0048707,GO:0048729,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051179,GO:0051276,GO:0060255,GO:0060429,GO:0060562,GO:0061024,GO:0065007,GO:0071103,GO:0071840,GO:0071944,GO:0080090,GO:2000112,GO:2000113 - 0.0009972 48.0
DYD3_k127_2274870_0 Metallopeptidase family M24 K01271 - 3.4.13.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000001569 269.0
DYD3_k127_2281987_0 Cell division protein 48 (CDC48), domain 2 K13525 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 492.0
DYD3_k127_2281987_1 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000000006852 144.0
DYD3_k127_2281987_2 Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB) K03124 - - 0.0000000000000000003481 100.0
DYD3_k127_2281987_3 helix_turn_helix ASNC type - - - 0.000000000009255 78.0
DYD3_k127_2292444_0 MgtC family - - - 0.0000000000000000000000000000000000000000000001674 186.0
DYD3_k127_2292444_1 Catalyzes the conversion of AMP and phosphate to adenine and ribose 1,5-bisphosphate (R15P). Exhibits phosphorylase activity toward CMP and UMP in addition to AMP. Functions in an archaeal AMP degradation pathway, together with R15P isomerase and RubisCO K18931 - 2.4.2.57 0.0001011 44.0
DYD3_k127_2292793_0 benzoyl-CoA oxygenase K15512 - 1.14.13.208 0.0000000000000000000000000000000000000000000000000000000000001616 232.0
DYD3_k127_2292793_1 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000003351 204.0
DYD3_k127_2292793_2 Isocitrate isopropylmalate dehydrogenase K00052 - 1.1.1.85 0.000000000000000000000000000000000000000000000000003126 196.0
DYD3_k127_2292793_3 Stress-induced bacterial acidophilic repeat motif K06884 - - 0.0000000000000000003955 100.0
DYD3_k127_2292793_4 Toxic component of a toxin-antitoxin (TA) module. An RNase K18828 - - 0.0000000000000000685 86.0
DYD3_k127_2292793_5 Putative antitoxin - - - 0.00000000001656 70.0
DYD3_k127_2294201_0 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000001097 271.0
DYD3_k127_2312405_0 cyanophycin synthetase K03802 - 6.3.2.29,6.3.2.30 2.24e-214 687.0
DYD3_k127_2312405_1 An RNase that has 5'-3' exonuclease activity. May be involved in RNA degradation K12574 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007694 469.0
DYD3_k127_2312405_2 Belongs to the FPP GGPP synthase family K13787 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000000000000000000000000005415 249.0
DYD3_k127_2316872_0 Protein kinase domain K08851,K15904 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234,2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002029 472.0
DYD3_k127_2316872_1 ATP-dependent agmatine transferase that catalyzes the formation of 2-agmatinylcytidine (agm2C) at the wobble position (C34) of tRNA(Ile2), converting the codon specificity from AUG to AUA K06932 - 6.3.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000001364 264.0
DYD3_k127_2327387_0 PFAM alpha beta hydrolase fold - - - 0.0000000000000000000000000002139 128.0
DYD3_k127_2327387_1 AAA ATPase domain - - - 0.00000000008143 74.0
DYD3_k127_2330263_0 - - - - 0.00000000003592 73.0
DYD3_k127_2330263_1 - - - - 0.00001001 53.0
DYD3_k127_2346158_0 PFAM Alpha beta hydrolase - - - 0.00000000000001986 85.0
DYD3_k127_2347261_0 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000001109 86.0
DYD3_k127_2347261_1 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 0.0000000000000002256 81.0
DYD3_k127_2347261_2 Matrixin - - - 0.000000000000006208 87.0
DYD3_k127_2348457_0 Domain of unknown function (DUF4347) - - - 0.0000000618 67.0
DYD3_k127_2348457_1 PFAM Glyoxalase bleomycin resistance protein dioxygenase K07032 - - 0.0001697 46.0
DYD3_k127_2348702_0 Bacterial Ig-like domain (group 3) K20276 - - 0.0002093 55.0
DYD3_k127_2352771_0 Serine protease with a broad substrate specificity K17734 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005488,GO:0005509,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0046872,GO:0070011,GO:0071704,GO:0140096,GO:1901564 - 0.000000000000000000000000000000000000000000001677 180.0
DYD3_k127_2352771_1 domain protein - - - 0.000000000000000000000000000001565 130.0
DYD3_k127_2352771_2 protein conserved in archaea - - - 0.0000000000000001016 91.0
DYD3_k127_2353448_0 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.00000000000000000000000000000000001238 146.0
DYD3_k127_2353448_1 Thermolysin metallopeptidase, catalytic domain K19702 - 3.4.11.24 0.000000000004613 78.0
DYD3_k127_2382684_0 Zinc-binding dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002347 317.0
DYD3_k127_2391363_0 PAS fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001593 318.0
DYD3_k127_2391363_1 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 301.0
DYD3_k127_2391363_2 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000001263 127.0
DYD3_k127_2391363_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000008015 106.0
DYD3_k127_2391363_4 Activator of hsp90 atpase 1 family protein - - - 0.000000000000000001243 96.0
DYD3_k127_2391363_5 AraC-like ligand binding domain - - - 0.0000000000000008316 87.0
DYD3_k127_2422537_0 ATP dependent DNA ligase C terminal region K10747 GO:0000287,GO:0003674,GO:0003824,GO:0003909,GO:0003910,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006266,GO:0006271,GO:0006273,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016874,GO:0016886,GO:0022616,GO:0030312,GO:0033554,GO:0034641,GO:0034645,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0071944,GO:0090304,GO:0140097,GO:1901360,GO:1901576 6.5.1.1,6.5.1.6,6.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001563 377.0
DYD3_k127_2422669_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003863 332.0
DYD3_k127_2422669_1 Acetyltransferase (GNAT) family - - - 0.000002478 59.0
DYD3_k127_2424922_0 Belongs to the peptidase M48B family K03799 - - 0.00000000000000000000000000000000000000000000000000000000008516 214.0
DYD3_k127_2424922_1 PFAM LemA family protein K03744 - - 0.0000000000000000000000000000000000000000000000000000002828 199.0
DYD3_k127_2426466_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000001429 184.0
DYD3_k127_2426466_1 permease - - - 0.000000000000000000000000000000000000000005346 164.0
DYD3_k127_2438350_0 amino acid K03294,K13868 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001874 339.0
DYD3_k127_2438350_1 Belongs to the UPF0145 family - - - 0.000000000000000000000001224 120.0
DYD3_k127_243985_0 PAP2 superfamily - - - 0.00000000000000000000000000000009611 136.0
DYD3_k127_243985_1 Glycosyl transferase 4-like domain - - - 0.00000000000000000001411 96.0
DYD3_k127_243985_2 Acetyl propionyl-CoA carboxylase, alpha subunit K11263 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 6.3.4.14,6.4.1.2,6.4.1.3 0.00000000000000007795 81.0
DYD3_k127_243985_3 X-Pro dipeptidyl-peptidase (S15 family) K06889 - - 0.0000000007292 71.0
DYD3_k127_2451266_0 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001987 347.0
DYD3_k127_2451266_1 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.000000000000000000000000000001511 125.0
DYD3_k127_2458346_0 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000005416 109.0
DYD3_k127_2458346_1 metallopeptidase activity - - - 0.0000000000000000000004069 107.0
DYD3_k127_2458346_2 PFAM GCN5-related N-acetyltransferase - - - 0.000000000000000000006396 102.0
DYD3_k127_2458346_3 Belongs to the glycosyl hydrolase 5 (cellulase A) family K01179 - 3.2.1.4 0.000005947 59.0
DYD3_k127_2458346_4 Hsp20/alpha crystallin family K13993 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006457,GO:0006950,GO:0006986,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010033,GO:0033554,GO:0034605,GO:0034620,GO:0035966,GO:0035967,GO:0042221,GO:0042802,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0050896,GO:0051082,GO:0051716,GO:0051788,GO:0061077,GO:0070887,GO:0071218,GO:0071310 - 0.0005322 49.0
DYD3_k127_247896_0 acyl-CoA dehydrogenase K00248,K22430 - 1.3.1.108,1.3.8.1 0.00000000000000000000002074 103.0
DYD3_k127_247896_1 bacterial-type flagellum-dependent cell motility - - - 0.0003899 54.0
DYD3_k127_2484849_0 metalloendopeptidase activity K08602 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002282 514.0
DYD3_k127_2503208_0 Involved in DNA repair and in homologous recombination. May regulate the cleavage reactions of the branch-structured DNA. Has a very weak ATPase activity that is not stimulated by DNA. Binds DNA but does not promote DNA strands exchange K04484 - - 0.000000000000000000000000000000000000000000000000000285 198.0
DYD3_k127_2503208_1 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA K00784 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0031123,GO:0034414,GO:0034470,GO:0034641,GO:0034660,GO:0042779,GO:0042780,GO:0042781,GO:0043170,GO:0043628,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1905267 3.1.26.11 0.000000000000000000000000000000000002438 139.0
DYD3_k127_2513424_0 - - - - 0.0000000000000000000000000000000000000009012 169.0
DYD3_k127_2513424_1 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 GO:0003674,GO:0003824,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0018130,GO:0019438,GO:0019752,GO:0030272,GO:0034641,GO:0035999,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0046653,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.3.2 0.000000000000000000000002394 110.0
DYD3_k127_2513424_2 Protein-disulfide isomerase K07396 - - 0.00000000001024 75.0
DYD3_k127_2513424_3 ubiE/COQ5 methyltransferase family K15942,K21172 - 2.1.1.288 0.00000000001249 68.0
DYD3_k127_2513424_4 ATP-dependent DNA helicase activity K11273 GO:0000070,GO:0000228,GO:0000278,GO:0000280,GO:0000785,GO:0000790,GO:0000819,GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007059,GO:0007062,GO:0007064,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022402,GO:0031974,GO:0031981,GO:0032392,GO:0032508,GO:0033554,GO:0034085,GO:0034641,GO:0034645,GO:0035861,GO:0036297,GO:0042623,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0045005,GO:0046483,GO:0048285,GO:0050896,GO:0051276,GO:0051716,GO:0070013,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0090734,GO:0098813,GO:0140014,GO:0140097,GO:1901360,GO:1901576,GO:1903047 3.6.4.13 0.00008818 55.0
DYD3_k127_2518128_0 Belongs to the carbohydrate kinase PfkB family K00852,K22026 - 2.7.1.15,2.7.1.213,2.7.1.73 0.00000000000000000000000000000000000000000002203 175.0
DYD3_k127_2518128_1 Putative zinc- or iron-chelating domain - - - 0.0000000000000000000000000000008888 134.0
DYD3_k127_2518128_2 - - - - 0.00000000000000000004616 96.0
DYD3_k127_2518128_3 FR47-like protein - - - 0.00000000000000005327 94.0
DYD3_k127_2518128_4 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000004229 66.0
DYD3_k127_2521978_0 Belongs to the peptidase S8 family - - - 0.000000000000000000000281 113.0
DYD3_k127_2521978_1 cellulase activity K01179 - 3.2.1.4 0.0005067 45.0
DYD3_k127_2530942_0 Belongs to the CarA family K01956 - 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005323 395.0
DYD3_k127_2530942_1 COG2890 Methylase of polypeptide chain release factors K02493 - 2.1.1.297 0.00000000000000002315 86.0
DYD3_k127_254099_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 0.000000000000000000000000001837 118.0
DYD3_k127_254099_1 Acyl-CoA hydrolase K10806 - - 0.00000000006247 66.0
DYD3_k127_254099_2 Bacterio-opsin activator HTH K06930 - - 0.0006684 51.0
DYD3_k127_2557218_0 iron dependent repressor - - - 0.0000000000000000000000000000000000001172 157.0
DYD3_k127_2557218_1 metal-dependent protease of the PAD1 JAB1 superfamily K20110 - 3.4.19.15 0.000000000000000000000000000004687 126.0
DYD3_k127_2564034_0 COG1520 FOG WD40-like repeat - - - 0.00006404 56.0
DYD3_k127_2568162_0 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins - - - 0.00000000000000000000000000000000000000000004393 168.0
DYD3_k127_2568162_1 Phospholipase, patatin family - - - 0.00000000000000000000003607 111.0
DYD3_k127_2568162_2 PFAM Thiamin pyrophosphokinase, catalytic region K00949 - 2.7.6.2 0.00000000000000000002141 99.0
DYD3_k127_2568193_0 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000001165 247.0
DYD3_k127_2568193_1 Glycosyl transferase 4-like - - - 0.000000000000000000002504 109.0
DYD3_k127_2568193_2 Glycosyl transferases group 1 - - - 0.00000000000000000001955 99.0
DYD3_k127_2568193_3 Methyltransferase type 11 - - - 0.00000000000005515 81.0
DYD3_k127_2568193_4 Glycosyl transferase family 21 - - - 0.00000000002077 74.0
DYD3_k127_2568193_5 PFAM Glycosyl transferase, group 1 - - - 0.00000009441 61.0
DYD3_k127_2570259_0 Belongs to the peptidase S16 family K04076 - 3.4.21.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001687 560.0
DYD3_k127_2571663_0 electron transfer flavoprotein, alpha subunit K03522,K22432 - 1.3.1.108 0.0000000000000000000000000000000000000000000000000000000000000000299 239.0
DYD3_k127_2571663_1 Electron transfer K03521 - - 0.000000000000000000000000000000000000000005695 176.0
DYD3_k127_2571663_2 serine-type peptidase activity - - - 0.0000000000000000000000000000003617 135.0
DYD3_k127_2571663_3 Tetratricopeptide repeat - - - 0.0002475 49.0
DYD3_k127_257614_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533,K17686 - 3.6.3.4,3.6.3.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004341 624.0
DYD3_k127_257614_1 Cell division protein 48, CDC48, domain 2 K13525 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009241 359.0
DYD3_k127_257614_2 Belongs to the aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003688 361.0
DYD3_k127_257614_3 E1-E2 ATPase K01533,K17686 - 3.6.3.4,3.6.3.54 0.000000763 55.0
DYD3_k127_257614_4 Hsp20/alpha crystallin family K13993 - - 0.0005305 48.0
DYD3_k127_2637621_0 tRNA synthetases class I (W and Y) K01867 GO:0003674,GO:0003824,GO:0004812,GO:0004830,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006436,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000356 409.0
DYD3_k127_2653117_0 Fibronectin-binding protein A N-terminus (FbpA) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009642 343.0
DYD3_k127_2653117_1 Involved in the catabolism of quinolinic acid (QA) K00767 - 2.4.2.19 0.000000000000000000000000000000000000000000000000000002568 201.0
DYD3_k127_2653117_2 S-adenosyl-L-methionine-dependent transferase that acts as a component of the wyosine derivatives biosynthesis pathway. Catalyzes the transfer of the alpha-amino-alpha-carboxypropyl (acp) group from S-adenosyl-L-methionine to 4-demethylwyosine (imG-14), forming 7-aminocarboxypropyl-demethylwyosine (wybutosine-86) at position 37 of tRNA(Phe) K07055 - 2.5.1.114 0.0000000000000000000000003362 112.0
DYD3_k127_2666741_0 PFAM Flavin containing amine oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000001901 225.0
DYD3_k127_2666741_1 - K00960 - 2.7.7.6 0.00000006864 53.0
DYD3_k127_2667350_0 protein conserved in archaea - - - 0.00000000000009479 77.0
DYD3_k127_2667350_1 Glycosyl transferase family 21 - - - 0.000000004858 67.0
DYD3_k127_2707973_0 Putative inner membrane exporter, YdcZ K09936 - - 0.0000000000000000000000000000000000000002563 154.0
DYD3_k127_2707973_1 CAAX protease self-immunity - - - 0.0000000000000000000000000000000000000004438 160.0
DYD3_k127_2707973_3 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.00005266 54.0
DYD3_k127_2708404_0 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 497.0
DYD3_k127_2708404_1 PFAM bifunctional deaminase-reductase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002276 276.0
DYD3_k127_2708404_2 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000005158 256.0
DYD3_k127_2708404_3 Activator of Hsp90 ATPase - - - 0.000000000000000000000000000000000001055 154.0
DYD3_k127_2708404_4 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000007061 112.0
DYD3_k127_2708404_5 repeat protein - - - 0.0000000000000000000007466 102.0
DYD3_k127_2708404_6 Transcriptional - - - 0.000000000000000000003155 96.0
DYD3_k127_2708404_7 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000004335 75.0
DYD3_k127_2708404_8 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000302 72.0
DYD3_k127_2708555_0 PFAM PKD domain containing protein - - - 0.00003023 57.0
DYD3_k127_2708555_1 PFAM Endonuclease exonuclease phosphatase K07004 - - 0.0008925 53.0
DYD3_k127_2708555_2 Protein of unknown function (DUF2418) - - - 0.0009593 44.0
DYD3_k127_2708976_0 TIGRFAM chromate transporter, chromate ion transporter (CHR) family K07240 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002585 250.0
DYD3_k127_2708976_1 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.000000000000000000000000000000000000000000000000000009306 199.0
DYD3_k127_271536_0 SMART Peptidase A22, presenilin signal peptide - - - 0.00000000000000000000000000000000000009031 151.0
DYD3_k127_271536_1 Glyoxalase-like domain - - - 0.0000000000000000000000000001321 120.0
DYD3_k127_271536_2 regulator of chromosome condensation, RCC1 - - - 0.000000000000001189 90.0
DYD3_k127_271536_3 PFAM amino acid-binding ACT domain protein - - - 0.00000000000249 72.0
DYD3_k127_271536_4 membrane-bound metal-dependent hydrolase (DUF457) K07038 - - 0.000000002333 66.0
DYD3_k127_271536_5 PFAM blue (type 1) copper domain protein - - - 0.000006128 59.0
DYD3_k127_271536_6 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0002834 53.0
DYD3_k127_271536_7 - - - - 0.0006689 46.0
DYD3_k127_2721923_0 COG1960 Acyl-CoA dehydrogenases K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002809 291.0
DYD3_k127_2721923_1 PFAM Acyl-CoA dehydrogenase, C-terminal domain K00248 - 1.3.8.1 0.0000000000000000000000000000000000000000004517 178.0
DYD3_k127_2721923_2 HxlR-like helix-turn-helix - - - 0.0003245 49.0
DYD3_k127_2724693_0 ABC transporter, phosphonate, periplasmic substrate-binding protein K13040 - 2.7.13.3 0.0000000000000000000000000000000000000001596 162.0
DYD3_k127_2724693_1 GAF domain - - - 0.0000000000000000000000000000000000002606 162.0
DYD3_k127_2725827_0 Nitroreductase family - - - 0.0000000000000000000000000000000002241 141.0
DYD3_k127_2725827_1 YcaO cyclodehydratase, ATP-ad Mg2+-binding K09136 - - 0.0000000000009678 74.0
DYD3_k127_2725910_0 Putative exonuclease SbcCD, C subunit K03546 - - 0.000000000000000000000000000000000000000003699 159.0
DYD3_k127_2725910_1 - - - - 0.00021 52.0
DYD3_k127_2737388_0 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000066 379.0
DYD3_k127_2737388_1 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005713 252.0
DYD3_k127_2737388_2 Forms part of the polypeptide exit tunnel K02930 - - 0.000000000000000000000000000000000000000000000000000000000000000001805 234.0
DYD3_k127_2737388_3 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.000000000000000000000000000000000000003653 150.0
DYD3_k127_2737388_4 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.0000000000000000000000000000000008277 136.0
DYD3_k127_2737388_5 Binds the lower part of the 30S subunit head K02982 - - 0.000000000000000000000000000001661 130.0
DYD3_k127_2737388_6 ribosomal protein S3 K02982 GO:0000702,GO:0002181,GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003735,GO:0003824,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006259,GO:0006281,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008534,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000004497 129.0
DYD3_k127_2737388_7 translation initiation factor activity K07114,K07169,K12065 - - 0.000000000000000000000003278 120.0
DYD3_k127_2737388_8 Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome K02892 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000005698 85.0
DYD3_k127_2743203_0 Domain of unknown function (DUF4395) - - - 0.0000000000002036 81.0
DYD3_k127_2743203_1 Thioredoxin - - - 0.000004834 56.0
DYD3_k127_274816_0 Dehydrogenase K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002869 423.0
DYD3_k127_274816_1 Carboxypeptidase regulatory-like domain K07151 - 2.4.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 404.0
DYD3_k127_274816_2 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000007471 153.0
DYD3_k127_274816_3 Belongs to the peptidase M50B family - - - 0.000000000000000000000000000000000000001418 162.0
DYD3_k127_2779774_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004183 453.0
DYD3_k127_2779774_1 Heavy metal translocating P-type atpase K17686 - 3.6.3.54 0.000000000000893 72.0
DYD3_k127_2779774_2 3-hydroxyacyl-CoA dehydrogenase domain protein K00074 - 1.1.1.157 0.0000000006406 59.0
DYD3_k127_2784474_0 exporter of polyketide K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009707 470.0
DYD3_k127_2784474_1 Acetyltransferase (GNAT) family K00619 - 2.3.1.1 0.0001084 54.0
DYD3_k127_2784616_0 8-oxoguanine DNA glycosylase K03660 - 4.2.99.18 0.000000000000000000000000000000000000000008205 175.0
DYD3_k127_2784616_1 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate K07558 - 2.7.7.72 0.0000000000000000000000000002211 128.0
DYD3_k127_2784616_2 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.000000000000000000007111 101.0
DYD3_k127_2784616_3 COG0671 Membrane-associated phospholipid phosphatase - - - 0.000000000000000009618 96.0
DYD3_k127_279153_0 Sugar isomerase (SIS) K15916 - 5.3.1.8,5.3.1.9 0.000000000000000000000000000000000000000000000000000000003298 213.0
DYD3_k127_279153_1 transcription regulator activity - - - 0.000000000000000000000000000000000000401 148.0
DYD3_k127_279153_2 Belongs to the MurCDEF family K01924 GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008763,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0040007,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 6.3.2.8 0.00004316 54.0
DYD3_k127_2793920_0 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K01652 - 2.2.1.6 0.00000000000000000000000000000000000000000000000005791 202.0
DYD3_k127_2793920_1 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.000000000000000000000000000000001753 151.0
DYD3_k127_2793920_2 Fe-S oxidoreductase - - - 0.00006875 55.0
DYD3_k127_2796689_0 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant K03465 - 2.1.1.148 0.0000000001542 74.0
DYD3_k127_280565_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000002146 233.0
DYD3_k127_280565_1 Copper binding proteins, plastocyanin/azurin family - - - 0.00000000000002274 81.0
DYD3_k127_2807137_0 Bacterial extracellular solute-binding protein K02064 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001281 274.0
DYD3_k127_2807137_1 ABC-type Fe3 transport system permease component K02011,K02063 - - 0.00000000000006507 81.0
DYD3_k127_2809664_0 Serine/Threonine protein kinases, catalytic domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000002727 157.0
DYD3_k127_2809664_1 Forkhead associated domain - - - 0.0000002086 63.0
DYD3_k127_2810959_0 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001355 284.0
DYD3_k127_2810959_1 exo-alpha-(2->6)-sialidase activity - - - 0.0006833 51.0
DYD3_k127_2812686_0 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000001589 162.0
DYD3_k127_2812686_1 - - - - 0.00000000000004688 82.0
DYD3_k127_2812686_2 CBD_II - - - 0.000002111 60.0
DYD3_k127_2812862_0 Anthranilate synthase component I, N terminal region K01657,K01665,K13950 - 2.6.1.85,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003713 335.0
DYD3_k127_2812862_1 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000001984 205.0
DYD3_k127_2820888_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000002801 135.0
DYD3_k127_2822046_0 amine dehydrogenase activity K20276 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 466.0
DYD3_k127_2822046_1 DNA polymerase elongation subunit (Family B) K02319 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001997 385.0
DYD3_k127_2822046_2 - - - - 0.0000000005193 70.0
DYD3_k127_2825180_0 Domain of unknown function (DUF1611_N) Rossmann-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007657 348.0
DYD3_k127_2825180_1 PFAM PHP domain K02347 - - 0.00000000000000000000000000000000000000000000001306 186.0
DYD3_k127_2825180_2 Belongs to the peptidase S8 family K14645,K20276 - - 0.00000000000000000000000000000000009417 143.0
DYD3_k127_2825180_3 Protein conserved in bacteria - - - 0.00003261 50.0
DYD3_k127_2829756_0 GTPase of unknown function C-terminal K06942 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004253 426.0
DYD3_k127_2829756_1 Hemolysins and related proteins containing CBS domains - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003793 276.0
DYD3_k127_2829756_2 - K00960 - 2.7.7.6 0.0000000000000000001204 90.0
DYD3_k127_2833611_0 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate K07558 - 2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000001351 248.0
DYD3_k127_2833611_1 - - - - 0.000000000000007784 85.0
DYD3_k127_2835446_0 Alpha-2-Macroglobulin K06894 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 477.0
DYD3_k127_2835446_1 NYN domain - - - 0.0000000000000000000000001293 111.0
DYD3_k127_2837620_0 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005422 417.0
DYD3_k127_2837620_1 protein conserved in archaea - - - 0.00000004911 66.0
DYD3_k127_2842888_0 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001464 422.0
DYD3_k127_2842888_1 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006485 248.0
DYD3_k127_2852395_0 argininosuccinate lyase K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 0.0000000000000000000000000000000006853 137.0
DYD3_k127_2852395_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01866 - 6.1.1.1 0.00000000000000000000004905 107.0
DYD3_k127_2852395_2 - - - - 0.000000000000001261 79.0
DYD3_k127_2852815_0 Belongs to the UPF0215 family K09120 - - 0.000000000000000000000000000000002469 136.0
DYD3_k127_2852815_1 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000001649 117.0
DYD3_k127_2852815_2 glyoxalase III activity - - - 0.00000000000000000000000331 111.0
DYD3_k127_2852815_3 glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000006274 88.0
DYD3_k127_2852815_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K11527 - 2.7.13.3 0.00000000286 66.0
DYD3_k127_2852815_5 Histidine kinase - - - 0.0000002918 57.0
DYD3_k127_2859252_0 YjgF/chorismate_mutase-like, putative endoribonuclease - - - 0.0000000000000000000000000000000000000000000000000002299 194.0
DYD3_k127_2859252_1 O-acyltransferase activity - - - 0.0000000000000000000000000000000000000004208 158.0
DYD3_k127_2859252_2 Acyltransferase K00655 - 2.3.1.51 0.000000000000000000000000000000001596 139.0
DYD3_k127_2859252_3 COGs COG4741 secreted endonuclease distantly related to Holliday junction resolvase - - - 0.0000000005255 70.0
DYD3_k127_2878914_0 diguanylate cyclase - - - 0.000000000000003465 90.0
DYD3_k127_2882402_0 Phytochrome region - - - 0.000002953 59.0
DYD3_k127_2887814_0 S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF- 2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis K20215 - 2.1.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000006435 271.0
DYD3_k127_2887814_1 NADP oxidoreductase coenzyme F420-dependent - - - 0.0000000000000000000000000000000000000000000001326 178.0
DYD3_k127_2887814_2 (mono)amine oxidase - - - 0.0000000000000000000005134 105.0
DYD3_k127_2887824_0 Ser-tRNA(Ala) hydrolase activity K01872,K07050 GO:0000049,GO:0002161,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006450,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016787,GO:0016788,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0097159,GO:0106074,GO:0140098,GO:0140101,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.00000000000000000000000000000000000000000000003867 188.0
DYD3_k127_2887824_1 transport, permease protein K01990,K01992 - - 0.0001795 53.0
DYD3_k127_2907704_0 COGs COG3263 NhaP-type Na H and K H antiporter with a unique C-terminal domain K11105 - - 0.00000000000004124 85.0
DYD3_k127_2913333_0 PFAM Transketolase, C-terminal domain K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001883 325.0
DYD3_k127_2913333_1 PFAM Transketolase K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001978 277.0
DYD3_k127_292893_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 317.0
DYD3_k127_292893_1 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796,K13941 - 2.5.1.15,2.7.6.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002446 290.0
DYD3_k127_292893_2 Orotidine 5'-phosphate decarboxylase K13831 - 4.1.2.43,5.3.1.27 0.000000000000000000000000000006833 120.0
DYD3_k127_292893_3 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.000000000000000001971 89.0
DYD3_k127_292893_4 Zn_pept K05996 - 3.4.17.18 0.0000000000000008765 90.0
DYD3_k127_292893_5 4-oxalocrotonate tautomerase K01821 - 5.3.2.6 0.00004465 50.0
DYD3_k127_292893_6 GyrI-like small molecule binding domain - - - 0.0003324 50.0
DYD3_k127_2936362_0 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000494 153.0
DYD3_k127_2936362_1 COG1404 Subtilisin-like serine proteases K14645 - - 0.00000000000000000000000000000002565 133.0
DYD3_k127_294912_0 PFAM PEBP family protein K06910 - - 0.0000000000000000000000000000000000000000000005789 175.0
DYD3_k127_294912_1 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.00000001111 66.0
DYD3_k127_294927_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008463 479.0
DYD3_k127_294927_1 GTPase activity K07588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003525 316.0
DYD3_k127_294927_2 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K07342 - - 0.000000000001322 74.0
DYD3_k127_2964991_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008734 531.0
DYD3_k127_2964991_1 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.00000000000000000000000000000000000000000000007438 179.0
DYD3_k127_2964991_2 Belongs to the TrpF family K01817 - 5.3.1.24 0.000000000000000000001445 99.0
DYD3_k127_2966208_0 - - - - 0.0000000000000000000000000000000004546 148.0
DYD3_k127_2966208_1 Serine aminopeptidase, S33 - - - 0.000000001134 69.0
DYD3_k127_2966208_2 - - - - 0.00005014 57.0
DYD3_k127_2992118_0 Enoyl-CoA hydratase/isomerase K01692 - 4.2.1.17 0.000000000000000000001502 109.0
DYD3_k127_2992118_1 Involved in chromosome partitioning - - - 0.000000000000000007603 85.0
DYD3_k127_2992118_2 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.0000000000007309 70.0
DYD3_k127_2992118_3 glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000107 61.0
DYD3_k127_2992118_4 PFAM TatD-related deoxyribonuclease K07049 - - 0.0001315 44.0
DYD3_k127_2995047_0 Glutaredoxin-like domain (DUF836) - - - 0.0000002181 55.0
DYD3_k127_2999340_0 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.00000000000000000003784 90.0
DYD3_k127_2999340_1 helix_turn_helix ASNC type - - - 0.000007388 58.0
DYD3_k127_3002618_0 Dual specificity protein phosphatase, N-terminal half K06639 GO:0000003,GO:0000022,GO:0000070,GO:0000075,GO:0000077,GO:0000226,GO:0000235,GO:0000278,GO:0000280,GO:0000281,GO:0000819,GO:0000910,GO:0000922,GO:0003674,GO:0003824,GO:0004721,GO:0004722,GO:0004725,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005813,GO:0005815,GO:0005818,GO:0005819,GO:0005829,GO:0005856,GO:0005874,GO:0005876,GO:0005881,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007050,GO:0007051,GO:0007052,GO:0007059,GO:0007088,GO:0007096,GO:0007143,GO:0007154,GO:0007165,GO:0007276,GO:0007292,GO:0007346,GO:0008138,GO:0008150,GO:0008152,GO:0008283,GO:0009893,GO:0009987,GO:0010564,GO:0010604,GO:0010948,GO:0015630,GO:0016043,GO:0016311,GO:0016604,GO:0016787,GO:0016788,GO:0016791,GO:0019222,GO:0019538,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0023052,GO:0030030,GO:0030031,GO:0030496,GO:0031323,GO:0031325,GO:0031396,GO:0031398,GO:0031399,GO:0031401,GO:0031570,GO:0031572,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032501,GO:0032504,GO:0033043,GO:0033206,GO:0033554,GO:0035335,GO:0035556,GO:0036211,GO:0040038,GO:0042578,GO:0042770,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0044703,GO:0044782,GO:0045595,GO:0045786,GO:0045930,GO:0048285,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048609,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051173,GO:0051225,GO:0051231,GO:0051233,GO:0051246,GO:0051247,GO:0051255,GO:0051256,GO:0051276,GO:0051301,GO:0051321,GO:0051338,GO:0051347,GO:0051438,GO:0051443,GO:0051704,GO:0051716,GO:0051726,GO:0051783,GO:0060255,GO:0060271,GO:0060284,GO:0061640,GO:0065007,GO:0065009,GO:0070013,GO:0070925,GO:0071704,GO:0071840,GO:0071850,GO:0072395,GO:0072401,GO:0072422,GO:0072425,GO:0072686,GO:0080090,GO:0090307,GO:0098813,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0120031,GO:0120036,GO:0140013,GO:0140014,GO:0140096,GO:1901564,GO:1901987,GO:1901988,GO:1901990,GO:1902749,GO:1902750,GO:1902850,GO:1903046,GO:1903047,GO:1903320,GO:1903322,GO:1904666,GO:1904668,GO:1990023 3.1.3.16,3.1.3.48 0.0004352 49.0
DYD3_k127_3007233_0 DEAD DEAH box helicase K03724 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010501,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070035,GO:0071704,GO:0090304,GO:0140098,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001839 504.0
DYD3_k127_3007233_1 PFAM PKD domain containing protein - - - 0.000000000005329 78.0
DYD3_k127_3007233_2 Protein kinase domain K12132 - 2.7.11.1 0.0000009283 61.0
DYD3_k127_3062626_0 COG1668 ABC-type Na efflux pump, permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004074 384.0
DYD3_k127_3062626_1 COG1668 ABC-type Na efflux pump, permease component - - - 0.0000000000000000000000000000000000000000000002102 181.0
DYD3_k127_3062626_2 ABC-type multidrug transport system, ATPase component K01990 - - 0.0000000000000001257 82.0
DYD3_k127_3071901_0 Fibronectin type III domain - - - 0.00000000000000000000001936 113.0
DYD3_k127_3071901_1 PFAM metallophosphoesterase K06953 - - 0.000000000000000001835 92.0
DYD3_k127_3075778_0 Fibronectin type 3 domain K22350 - 1.16.3.3 0.000003333 58.0
DYD3_k127_3090281_0 C-terminal domain of CHU protein family - - - 0.00001832 55.0
DYD3_k127_309210_0 Bacterial Ig-like domain (group 3) - - - 0.0001001 55.0
DYD3_k127_309451_0 Metallopeptidase family M24 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009869 350.0
DYD3_k127_309451_1 Catalyzes a transaldol reaction between 6-deoxy-5- ketofructose 1-phosphate (DKFP) and L-aspartate semialdehyde (ASA) with an elimination of hydroxypyruvaldehyde phosphate to yield 2- amino-3,7-dideoxy-D-threo-hept-6-ulosonate (ADH). Plays a key role in an alternative pathway of the biosynthesis of 3-dehydroquinate (DHQ), which is involved in the canonical pathway for the biosynthesis of aromatic amino acids K16306 - 2.2.1.10,4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000771 275.0
DYD3_k127_309451_2 Catalyzes the oxidative deamination and cyclization of 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonic acid (ADH) to yield 3- dehydroquinate (DHQ), which is fed into the canonical shikimic pathway of aromatic amino acid biosynthesis K11646 - 1.4.1.24 0.0000000000000000000000000000000000000000000008094 175.0
DYD3_k127_309451_3 regulator of amino acid metabolism, contains ACT domain K07103 - - 0.000000000000000000000000000000001948 138.0
DYD3_k127_3124145_0 Cell division protein 48 (CDC48) domain 2 K13525 - - 2.069e-261 819.0
DYD3_k127_3124145_1 Possesses two activities a DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3' to 5' direction. Has a template-primer preference which is characteristic of a replicative DNA polymerase K02323 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004429 390.0
DYD3_k127_3124145_2 Protein of unknown function (DUF531) K09725 - - 0.0000000000000000000000000000000000000000000667 168.0
DYD3_k127_3124145_3 AAA domain - - - 0.0000000000000000000000000000000001588 142.0
DYD3_k127_3124145_4 Pyridine nucleotide-disulphide oxidoreductase - - - 0.0000000000000000000000001079 122.0
DYD3_k127_3124145_5 - - - - 0.00000000000000000000002004 116.0
DYD3_k127_3124145_6 Mycolic acid cyclopropane synthetase - - - 0.00000008364 62.0
DYD3_k127_3124145_7 Belongs to the thioredoxin family K01829 GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0044424,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 5.3.4.1 0.000003045 57.0
DYD3_k127_3130687_0 carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity K01955 - 6.3.5.5 0.0 1268.0
DYD3_k127_3130687_1 Flap endonuclease GEN-like K15338 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008821,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 - 0.0000000002908 70.0
DYD3_k127_3138101_0 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000002201 223.0
DYD3_k127_3138101_1 oligopeptide transport K03305 - - 0.000000000000000000000000000000000000000000000000000000002872 223.0
DYD3_k127_3138101_2 Superfamily II DNA RNA helicases, SNF2 family - - - 0.000000000000000000000000000000000000000000000000107 201.0
DYD3_k127_3177103_0 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K19312 GO:0003674,GO:0003824,GO:0004658,GO:0016421,GO:0016874,GO:0016885 2.1.3.15,6.4.1.2,6.4.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001696 571.0
DYD3_k127_3177103_1 PFAM short-chain dehydrogenase reductase SDR K15314 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002353 516.0
DYD3_k127_3177103_2 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000006771 211.0
DYD3_k127_3180162_0 Non-ribosomal peptide synthetase modules and related proteins - - - 0.000001165 63.0
DYD3_k127_3185831_0 Glycosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000001986 215.0
DYD3_k127_3185831_1 Glycoside hydrolase - - - 0.00000000000000007533 95.0
DYD3_k127_3185831_2 Catalyzes the dephosphorylation of 2-phosphoglycolate - - - 0.00000006489 60.0
DYD3_k127_3213335_0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.00000001153 59.0
DYD3_k127_3213335_1 HxlR-like helix-turn-helix - - - 0.000005803 58.0
DYD3_k127_3213335_2 KEOPS complex Cgi121-like subunit K09119 - - 0.00001036 54.0
DYD3_k127_3223977_0 ATPases associated with a variety of cellular activities K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000008342 231.0
DYD3_k127_3223977_1 Acetyltransferase (GNAT) family - - - 0.0000000000103 71.0
DYD3_k127_3223977_2 Thioredoxin K03671 - - 0.00000005165 62.0
DYD3_k127_3234256_0 Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2 K03243 - - 2.18e-201 643.0
DYD3_k127_3234256_1 Large family of predicted nucleotide-binding domains K06865 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001877 574.0
DYD3_k127_3234256_2 L-asparaginase II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003366 303.0
DYD3_k127_3234256_3 Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline K01281 - 3.4.14.11 0.0000000000000000000000000000000000000000000000000000000001471 230.0
DYD3_k127_3234256_4 COGs COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferase K03179 - 2.5.1.39 0.000000000000000000000000000000000000000000000000000001961 215.0
DYD3_k127_3240286_0 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 GO:0003674,GO:0003824,GO:0004333,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006106,GO:0006108,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 4.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000804 519.0
DYD3_k127_3240286_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005467 377.0
DYD3_k127_3240286_2 PFAM Carbonic anhydrase K01673 - 4.2.1.1 0.000000000000000000000000000000005709 136.0
DYD3_k127_3240286_3 Surface antigen K07277 - - 0.000000000000000000000000001979 114.0
DYD3_k127_3240286_4 protein conserved in bacteria - - - 0.0000000000000000001514 104.0
DYD3_k127_3240286_5 Glycosyl transferases group 1 - - - 0.000000000000000008454 96.0
DYD3_k127_3240286_6 Domain of unknown function (DUF2382) - - - 0.00000003711 64.0
DYD3_k127_3240286_7 Belongs to the MIP aquaporin (TC 1.A.8) family K09873 GO:0000322,GO:0000325,GO:0000326,GO:0003674,GO:0005215,GO:0005275,GO:0005372,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006833,GO:0008150,GO:0008324,GO:0008519,GO:0009507,GO:0009536,GO:0009705,GO:0015075,GO:0015101,GO:0015200,GO:0015250,GO:0015267,GO:0015318,GO:0015695,GO:0015696,GO:0015837,GO:0015843,GO:0016020,GO:0016021,GO:0019755,GO:0022803,GO:0022838,GO:0022857,GO:0031090,GO:0031224,GO:0031226,GO:0032586,GO:0034220,GO:0042044,GO:0042807,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044437,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0072488,GO:0072489,GO:0098588,GO:0098655,GO:0098805 - 0.00025 45.0
DYD3_k127_3243596_0 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K19312 GO:0003674,GO:0003824,GO:0004658,GO:0016421,GO:0016874,GO:0016885 2.1.3.15,6.4.1.2,6.4.1.3 1.934e-220 694.0
DYD3_k127_3243596_1 COG1404 Subtilisin-like serine proteases K14645 GO:0005575,GO:0005576 - 0.0000000000453 72.0
DYD3_k127_3250351_1 DNA polymerase elongation subunit (Family B) K02319 - 2.7.7.7 0.0000000001874 69.0
DYD3_k127_3265157_0 epimerase dehydratase - - - 0.0000000000000000000000000000000000000000000000007397 183.0
DYD3_k127_3265157_1 Domain of unknown function (DU1801) - - - 0.000000000000000000000002759 116.0
DYD3_k127_3265157_2 PFAM peptidase S15 K01281,K06978 - 3.4.14.11 0.000000000000001479 91.0
DYD3_k127_3293953_0 GHMP kinases N terminal domain K01597 - 4.1.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001905 310.0
DYD3_k127_3293953_1 TIGRFAM haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED K01838 - 5.4.2.6 0.0000000000000000000000000002171 128.0
DYD3_k127_3293953_2 ABC transporter K03688 - - 0.00000000000000000000009306 107.0
DYD3_k127_3302570_0 Belongs to the DegT DnrJ EryC1 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002444 370.0
DYD3_k127_3302570_1 Mediates influx of magnesium ions K03284 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 304.0
DYD3_k127_3302570_10 polysaccharide biosynthetic process - - - 0.0000000000000000000006365 113.0
DYD3_k127_3302570_11 Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2- acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway K03525 - 2.7.1.33 0.000000000000000000008249 104.0
DYD3_k127_3302570_12 PFAM Glycosyl transferase, group 1 K13668 GO:0000009,GO:0000030,GO:0003674,GO:0003824,GO:0004376,GO:0005575,GO:0005623,GO:0005886,GO:0006629,GO:0006643,GO:0006664,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009247,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0016758,GO:0033164,GO:0040007,GO:0043750,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044464,GO:0046467,GO:0070085,GO:0071704,GO:0071944,GO:0097502,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.4.1.346 0.00000000000000003615 96.0
DYD3_k127_3302570_13 Glycosyl transferase family group 2 K16557 - - 0.0000000000228 77.0
DYD3_k127_3302570_2 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001288 267.0
DYD3_k127_3302570_3 Oxidoreductase domain protein K18855 - 1.1.1.374 0.0000000000000000000000000000000000000000000000000000000000000000000009007 250.0
DYD3_k127_3302570_4 Hexapeptide repeat of succinyl-transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000004929 233.0
DYD3_k127_3302570_5 Ribosomal RNA adenine dimethylases K02528 - 2.1.1.182 0.00000000000000000000000000000000000000000000000000443 193.0
DYD3_k127_3302570_6 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000002777 145.0
DYD3_k127_3302570_7 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.0000000000000000000000000000001076 132.0
DYD3_k127_3302570_8 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.0000000000000000000000000000002018 134.0
DYD3_k127_3302570_9 PFAM glycosyl transferase group 1 - - - 0.0000000000000000000001673 113.0
DYD3_k127_3302625_0 NAD(FAD)-dependent dehydrogenases K00529 - 1.18.1.3 0.0000000000000000000000000000000000000000000002822 171.0
DYD3_k127_3366131_0 domain, Protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004639 286.0
DYD3_k127_3366131_1 domain protein K20276 - - 0.0008635 54.0
DYD3_k127_3367465_0 PFAM thymidylate kinase K00943 - 2.7.4.9 0.00000000000000000000000000000000000002642 156.0
DYD3_k127_3367465_2 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K03151 - 2.8.1.4 0.0000000000001373 76.0
DYD3_k127_3389668_0 Phosphoribosylglycinamide synthetase, C domain K01945 - 6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002884 434.0
DYD3_k127_3389668_1 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.0000000000000000000000000000000000000002408 160.0
DYD3_k127_3389668_2 transcriptional - - - 0.00000000000000000000000000000002582 129.0
DYD3_k127_3389668_3 response regulator - - - 0.0000000000000000003138 101.0
DYD3_k127_3389668_4 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000000852 94.0
DYD3_k127_3389848_0 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002936 278.0
DYD3_k127_3389848_1 Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS K08681 - 4.3.3.6 0.0000000000000000000000000000000000000000000000000003763 191.0
DYD3_k127_3389848_2 - - - - 0.000006386 53.0
DYD3_k127_3393563_0 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003788 362.0
DYD3_k127_3393563_1 Recombinase - GO:0000150,GO:0003674,GO:0003824,GO:0006139,GO:0006259,GO:0006310,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0140097,GO:1901360 - 0.0001261 53.0
DYD3_k127_339406_0 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.00000000000000000000000000000000000000000001447 170.0
DYD3_k127_339406_1 Heavy metal translocating P-type atpase - - - 0.0000001812 61.0
DYD3_k127_339406_2 Stomatin (EPB72)-like 1 - GO:0002028,GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007178,GO:0008104,GO:0008150,GO:0008200,GO:0009987,GO:0010033,GO:0010766,GO:0010959,GO:0016020,GO:0016247,GO:0016248,GO:0022898,GO:0023052,GO:0031410,GO:0031982,GO:0032409,GO:0032410,GO:0032412,GO:0032413,GO:0032879,GO:0033036,GO:0034097,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0042221,GO:0042493,GO:0043226,GO:0043227,GO:0043229,GO:0043269,GO:0043271,GO:0044092,GO:0044424,GO:0044444,GO:0044464,GO:0045184,GO:0048519,GO:0050789,GO:0050794,GO:0050896,GO:0051049,GO:0051051,GO:0051179,GO:0051234,GO:0051716,GO:0060395,GO:0065007,GO:0065009,GO:0070887,GO:0071310,GO:0071345,GO:0071944,GO:0097708,GO:0098772,GO:0099106,GO:1901585,GO:1901586,GO:1902305,GO:1902306,GO:1904062,GO:1904063,GO:1990823,GO:1990830,GO:2000649,GO:2000650,GO:2001257,GO:2001258 - 0.0006463 52.0
DYD3_k127_3412837_0 Belongs to the universal ribosomal protein uS2 family K02967 GO:0000028,GO:0000447,GO:0000460,GO:0000461,GO:0000462,GO:0000466,GO:0000469,GO:0000478,GO:0000479,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0031123,GO:0031125,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043628,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003965 266.0
DYD3_k127_3412837_1 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.00000000000000000001033 96.0
DYD3_k127_3412837_2 - - - - 0.000000000000004626 85.0
DYD3_k127_3413009_0 XdhC and CoxI family K07402 - - 0.00000000000000000000000003264 121.0
DYD3_k127_3413009_1 Fibronectin type III domain - - - 0.00000000000000003411 87.0
DYD3_k127_341960_0 Putative FMN-binding domain K07734 - - 0.000000000000000000000000000000000000000000000000000000000000000000009325 242.0
DYD3_k127_341960_1 Polyprenyl synthetase K02523,K13787 - 2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90 0.00000000000000000000000000000000000001887 164.0
DYD3_k127_341960_2 transcriptional - - - 0.00000000000000000000000000173 126.0
DYD3_k127_3422339_0 Tryptophan halogenase K16033,K16431,K21256 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002943 274.0
DYD3_k127_3422339_1 Electron transfer flavoprotein K03522,K22432 - 1.3.1.108 0.0000002343 58.0
DYD3_k127_3423288_0 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000001058 177.0
DYD3_k127_3423288_1 - - - - 0.00000000000000000000002084 111.0
DYD3_k127_3423288_2 Mo-co oxidoreductase dimerisation domain K00387 - 1.8.3.1 0.0000006857 53.0
DYD3_k127_3428617_0 - - - - 0.000000004643 66.0
DYD3_k127_3438966_0 PFAM short-chain dehydrogenase reductase SDR K15314 - - 0.0000000000000000000000000000000000000000000000000000000000000372 241.0
DYD3_k127_3441699_0 Belongs to the arginase family K01476 - 3.5.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008764 333.0
DYD3_k127_3441699_1 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001508 305.0
DYD3_k127_3441699_2 MoeA N-terminal region (domain I and II) K03750,K07219 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000001177 259.0
DYD3_k127_3441699_3 FeoA K03709 - - 0.0000000000000000000000000000004147 128.0
DYD3_k127_3441699_4 archaeal Zn-finger protein - - - 0.0000000000000000405 93.0
DYD3_k127_3441699_5 TIGRFAM DNA polymerase (pol2) K02319 - 2.7.7.7 0.0000000000000004865 91.0
DYD3_k127_3441699_6 Histidine kinase - - - 0.000000000008588 76.0
DYD3_k127_3441699_7 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00006941 51.0
DYD3_k127_3448402_0 dehydratase - - - 0.0000000000000000000000000000000000000000006035 168.0
DYD3_k127_3458159_0 amine dehydrogenase activity - - - 0.00000000000000000007065 104.0
DYD3_k127_3458159_2 peptidase M6 immune inhibitor A K09607 - - 0.00000000382 69.0
DYD3_k127_3463079_0 Archaeal Nre, N-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009751 305.0
DYD3_k127_3463079_1 Calcineurin-like phosphoesterase K14379 - 3.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000264 265.0
DYD3_k127_3463079_2 RNA methylase K07446 - 2.1.1.213 0.00000000000000000000000000000000000000000004292 181.0
DYD3_k127_3463079_3 - - - - 0.000000000000000000000000000000000003093 147.0
DYD3_k127_3463079_4 Metal-dependent hydrolases of the beta-lactamase superfamily III - - - 0.00000000000000000000000000001094 127.0
DYD3_k127_3463079_5 phosphatidate phosphatase activity K01096,K19302 - 3.1.3.27,3.1.3.4,3.1.3.81,3.6.1.27 0.000000001861 68.0
DYD3_k127_3463079_6 Predicted integral membrane protein (DUF2269) - - - 0.0000003499 59.0
DYD3_k127_3468143_0 Domain of unknown function DUF87 K06915,K19172 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000536 513.0
DYD3_k127_3468143_1 SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity K03547,K05970 - 3.1.1.53 0.0000000000000000000000000000000000000000000000000000000000000000000003891 251.0
DYD3_k127_3468143_2 AAA domain K03546 - - 0.0000000000000000000000000000000000001657 163.0
DYD3_k127_3468143_3 Protein conserved in bacteria - - - 0.00000000000000000000002875 110.0
DYD3_k127_3480432_0 DbpA RNA binding domain K05592 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001762 365.0
DYD3_k127_3480432_1 haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000005622 120.0
DYD3_k127_3480432_2 Glutathione S-transferase, N-terminal domain K00799 - 2.5.1.18 0.0000002412 62.0
DYD3_k127_3501468_0 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001164 404.0
DYD3_k127_3501468_1 Male sterility protein K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 378.0
DYD3_k127_3501468_2 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.00000000000000000000000000000000000000000000000000000000000000001374 234.0
DYD3_k127_3501468_3 Polysaccharide biosynthesis protein K00067 - 1.1.1.133 0.000000000000000000000000000000000000000000000000000000000000004371 226.0
DYD3_k127_3509129_0 Uridine phosphorylase K00757 - 2.4.2.3 0.0000000000000000000000000001611 126.0
DYD3_k127_3516140_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003518 440.0
DYD3_k127_3516140_1 D-aminoacyl-tRNA deacylase with broad substrate specificity. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo K09716 - 3.1.1.96 0.000000000000000000000000000000000000000003642 169.0
DYD3_k127_3516140_2 PFAM ATP-binding region, ATPase domain protein - - - 0.0000000000000001473 85.0
DYD3_k127_3516140_3 acetyltransferase - - - 0.0000000001148 73.0
DYD3_k127_3516140_5 acyl-CoA dehydrogenase - - - 0.00001591 47.0
DYD3_k127_3516140_6 Acyl-CoA dehydrogenase, N-terminal domain K00248,K00249 - 1.3.8.1,1.3.8.7 0.00007398 52.0
DYD3_k127_3549851_0 non-ribosomal peptide synthetase - - - 0.0000000000000000000000000000000000000000000000000000000000000000003111 241.0
DYD3_k127_3549851_1 4-alpha-hydroxytetrahydrobiopterin dehydratase activity K01724 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0008124,GO:0016829,GO:0016835,GO:0016836,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464 4.2.1.96 0.00000000000004392 76.0
DYD3_k127_3549851_2 Belongs to the Nudix hydrolase family - - - 0.00005688 52.0
DYD3_k127_35506_0 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000001446 110.0
DYD3_k127_35506_1 Transcription factor zinc-finger K09981 - - 0.000000000002555 74.0
DYD3_k127_35506_2 membrane - - - 0.00001183 57.0
DYD3_k127_3553545_0 Sodium/hydrogen exchanger family K03455 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008739 361.0
DYD3_k127_3555402_0 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002257 336.0
DYD3_k127_3555402_1 Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA K04800 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 319.0
DYD3_k127_3559472_0 Belongs to the peptidase S16 family K06870 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003386 271.0
DYD3_k127_3559472_1 Glycosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000137 231.0
DYD3_k127_3559472_2 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.00000000000000000000003927 117.0
DYD3_k127_3559472_3 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.0000009344 54.0
DYD3_k127_3561139_0 Multicopper oxidase - - - 0.00000000000000000000000000000000009474 149.0
DYD3_k127_3561139_1 Transcriptional regulator K11924 - - 0.0000000002217 64.0
DYD3_k127_3562665_0 Belongs to the peptidase S8 family K14647 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005758 420.0
DYD3_k127_3562665_1 Sodium/hydrogen exchanger family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003125 287.0
DYD3_k127_3562665_2 COG0491 Zn-dependent hydrolases, including glyoxylases K01069 - 3.1.2.6 0.0000000007789 70.0
DYD3_k127_3562665_3 - - - - 0.00000001574 64.0
DYD3_k127_3569823_0 Pectate lyase - - - 0.00000000000000000000000001837 123.0
DYD3_k127_3581071_0 Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001646 456.0
DYD3_k127_3581071_1 TIGRFAM small GTP-binding protein K06944 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002722 368.0
DYD3_k127_3581071_2 Zn-dependent hydrolases of the beta-lactamase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000229 301.0
DYD3_k127_3581071_3 Transcriptional regulator, ArsR family - - - 0.00000000000000000000000001295 122.0
DYD3_k127_3593233_0 Glycosyltransferase like family 2 - - - 0.00000000000000000000000001361 124.0
DYD3_k127_3593233_1 PFAM Haloacid dehalogenase-like hydrolase - - - 0.0000000000000004667 81.0
DYD3_k127_3597594_0 PFAM ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007325 299.0
DYD3_k127_3597594_1 PFAM ABC-2 type transporter K01992 - - 0.0000000000000000000000000000000000000000000000000001481 206.0
DYD3_k127_3600121_0 Belongs to the peptidase S8 family - - - 0.0000000000000000000000000000000000000000001659 171.0
DYD3_k127_3600121_1 - - - - 0.00000000000000000000000000000000000001543 155.0
DYD3_k127_3600121_2 FKBP-type peptidyl-prolyl cis-trans isomerase K01802 - 5.2.1.8 0.0000000000000000000000000001893 130.0
DYD3_k127_3601029_0 cellulose binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000027 308.0
DYD3_k127_3601029_1 Two component regulator propeller - - - 0.00000000002812 64.0
DYD3_k127_3607848_0 Histidine kinase K13924 - 2.1.1.80,3.1.1.61 0.000000000000000000000000000005402 129.0
DYD3_k127_3607848_1 Bacterio-opsin activator HTH domain protein - - - 0.000000000001554 78.0
DYD3_k127_3644098_0 Belongs to the OMP decarboxylase family. Type 2 subfamily K01591,K13421 GO:0003674,GO:0003824,GO:0004590,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.4.2.10,4.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000007865 250.0
DYD3_k127_3644098_1 Belongs to the arginase family K01480 - 3.5.3.11 0.00000000000000000000000000000000000000000000000000000000000000004532 236.0
DYD3_k127_3644098_2 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.000000000000000000000000000000000000000000000000000009292 210.0
DYD3_k127_3644098_3 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.000000000000000000000000000000000000000000981 167.0
DYD3_k127_3644098_4 Functions by promoting the formation of the first peptide bond K03263 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000004729 150.0
DYD3_k127_3644098_5 Belongs to the cysteine synthase cystathionine beta- synthase family K12339,K21148 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004124,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0019344,GO:0019752,GO:0019842,GO:0030170,GO:0032991,GO:0033847,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0080146,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.113,2.5.1.47 0.000000000000000000000004883 117.0
DYD3_k127_3644098_6 SNARE associated Golgi protein K03975,K19302 - 3.6.1.27 0.000000000000000000000005599 115.0
DYD3_k127_3644098_7 Acid phosphatase homologues K19302 - 3.6.1.27 0.0004208 52.0
DYD3_k127_3644203_0 membrane protein (DUF2254) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 372.0
DYD3_k127_3644203_1 Protein of unknown function, DUF488 - - - 0.0000000000000000000000000000009598 129.0
DYD3_k127_3644203_2 Phosphoglycerate mutase family - - - 0.00000000000000000000000000003088 127.0
DYD3_k127_3655380_0 Membrane protein TerC - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004291 321.0
DYD3_k127_3655380_1 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002324 250.0
DYD3_k127_3655380_3 Ion transport K10716 - - 0.0000000008566 63.0
DYD3_k127_3668831_0 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002545 317.0
DYD3_k127_3668831_1 Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val) K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000002192 272.0
DYD3_k127_3668831_2 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 - 2.7.7.87 0.00000000000000000000000000001546 126.0
DYD3_k127_3668831_3 snRNP Sm proteins K04796 - - 0.00000000000007101 74.0
DYD3_k127_3668831_4 transcription factor, homolog of eukaryotic MBF1 K03627 - - 0.00000001208 60.0
DYD3_k127_3668831_5 Zinc metalloprotease (Elastase) - - - 0.000002469 60.0
DYD3_k127_3671323_0 EamA-like transporter family - - - 0.000000000000000000000000000000000000001872 164.0
DYD3_k127_3671323_1 Contacts the emerging nascent chain on the ribosome K03626 - - 0.000000000000000000002199 108.0
DYD3_k127_3671323_2 Adenylate kinase, active site lid K00939 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004017,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006172,GO:0006412,GO:0006518,GO:0006629,GO:0006644,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009059,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009133,GO:0009135,GO:0009136,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009179,GO:0009180,GO:0009185,GO:0009188,GO:0009259,GO:0009260,GO:0009987,GO:0010467,GO:0015949,GO:0015950,GO:0015951,GO:0016070,GO:0016208,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0017076,GO:0018130,GO:0019205,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0035639,GO:0036094,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046390,GO:0046483,GO:0046872,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090304,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.4.3 0.00000000000000005802 83.0
DYD3_k127_3671323_3 Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms K07027 - - 0.00000000000008086 74.0
DYD3_k127_3675462_0 Anticodon binding domain K01880 GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006426,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046983,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002227 519.0
DYD3_k127_3675462_1 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001974 328.0
DYD3_k127_3675462_2 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001376 273.0
DYD3_k127_3675462_3 Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate K01497 - 3.5.4.25 0.0000000000000000000000000000000000000000000000000000000000000000000000009227 260.0
DYD3_k127_3675462_4 PFAM polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000003596 143.0
DYD3_k127_3675462_5 Glycosyl transferases group 1 K08256 - 2.4.1.345 0.000000000000000000008131 107.0
DYD3_k127_3675462_6 Glycosyltransferase like family 2 - - - 0.000000002596 66.0
DYD3_k127_3690974_0 PFAM Histone deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002427 405.0
DYD3_k127_3690974_1 HELICc2 K10844 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000004412 239.0
DYD3_k127_3690974_2 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.00000000000000000000000000000000000000000000000000001263 195.0
DYD3_k127_3690974_3 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000001527 116.0
DYD3_k127_372813_0 COG0531 Amino acid transporters - - - 0.00000000000000000000000000000000001271 148.0
DYD3_k127_372813_1 phosphohydrolase (DHH superfamily) K07097 - - 0.000000000000000000000000000000002139 143.0
DYD3_k127_372813_2 Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends K03540 - 3.1.26.5 0.0000000000002022 75.0
DYD3_k127_3732743_0 PFAM acyl-CoA dehydrogenase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001993 367.0
DYD3_k127_3732743_1 Ankyrin repeats (many copies) - - - 0.00000000000000000008012 98.0
DYD3_k127_3743310_0 Sulfate permease K03321 - - 6.36e-229 724.0
DYD3_k127_3743310_1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 339.0
DYD3_k127_376898_0 eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA K03237 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000004192 104.0
DYD3_k127_376898_1 deoxyhypusine monooxygenase activity K01387 - 3.4.24.3 0.00000000000000000000007812 116.0
DYD3_k127_376898_2 binds to the 23S rRNA K02929 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000005762 75.0
DYD3_k127_376898_3 PFAM Ribosomal protein S27E K02978 - - 0.00000000001114 69.0
DYD3_k127_376898_4 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.00004365 55.0
DYD3_k127_3771685_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000143 225.0
DYD3_k127_3771685_1 PFAM DoxX family protein K16937 - 1.8.5.2 0.0000000000000000003705 88.0
DYD3_k127_37747_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001521 256.0
DYD3_k127_37747_1 Mechanosensitive ion channel K03442,K05802,K16052 - - 0.00000000000000000000000000000000000000000000000000000000004791 224.0
DYD3_k127_37747_2 Phenazine biosynthesis-like protein K06998 - 5.3.3.17 0.0000000000000000000000000000000000000001383 160.0
DYD3_k127_37747_3 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0000000000000002264 94.0
DYD3_k127_3775037_0 tRNA-splicing ligase RtcB K14415 GO:0000166,GO:0000394,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003972,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0008452,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016886,GO:0017076,GO:0019001,GO:0019002,GO:0030145,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901363 6.5.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008743 593.0
DYD3_k127_3775037_1 PFAM ABC-2 type transporter K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001049 247.0
DYD3_k127_3775037_2 Dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000006404 209.0
DYD3_k127_3775037_3 Psort location Cytoplasmic, score 8.87 - - - 0.00000000000000001573 96.0
DYD3_k127_3775037_4 HxlR-like helix-turn-helix - - - 0.000000000791 66.0
DYD3_k127_3802520_0 Dimerisation domain of Zinc Transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000003061 234.0
DYD3_k127_3802520_1 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000000000000000000000009156 213.0
DYD3_k127_3802520_2 Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress - - - 0.00000000000000000000000000000000000000000000000000001224 196.0
DYD3_k127_3802520_3 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000000001515 131.0
DYD3_k127_3802520_4 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000001202 77.0
DYD3_k127_3802958_0 PFAM Ribonuclease BN-like family K07058 - - 0.00000000000000000000000000000000000000000000000000001138 201.0
DYD3_k127_3816891_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 1.952e-297 935.0
DYD3_k127_3816891_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 GO:0003674,GO:0003824,GO:0003916,GO:0003918,GO:0005575,GO:0006139,GO:0006259,GO:0006265,GO:0006725,GO:0006807,GO:0006996,GO:0007059,GO:0008094,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360 5.99.1.3 2.033e-246 779.0
DYD3_k127_3816891_2 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000001201 260.0
DYD3_k127_3816891_3 PIN domain of ribonuclease K07060 - - 0.00000000000000000004737 101.0
DYD3_k127_3816891_4 PFAM PEGA domain - - - 0.00000000000000002443 96.0
DYD3_k127_3816891_5 PFAM Endonuclease Exonuclease phosphatase - - - 0.000000002575 70.0
DYD3_k127_381831_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000004952 172.0
DYD3_k127_381831_1 PASTA domain K12132 - 2.7.11.1 0.00000000000000000000009537 105.0
DYD3_k127_3853547_0 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000002034 190.0
DYD3_k127_3853547_1 bacterioferritin comigratory protein K03564 - 1.11.1.15 0.00000000000000000000000000000001098 134.0
DYD3_k127_3853547_2 Pyruvate kinase, barrel domain K00873 - 2.7.1.40 0.0000000000000000000000002253 109.0
DYD3_k127_3853547_3 OsmC-like protein - - - 0.00000173 57.0
DYD3_k127_3853547_4 GAF and HTH_10 associated domain - - - 0.000005335 57.0
DYD3_k127_3860811_0 Sugar-specific transcriptional regulator TrmB - - - 0.000001638 59.0
DYD3_k127_3864283_0 histidyl-tRNA aminoacylation K01892 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 378.0
DYD3_k127_3877860_0 ABC transporter K09695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002415 340.0
DYD3_k127_3877860_1 Amino acid kinase family K00928,K12524 - 1.1.1.3,2.7.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007589 302.0
DYD3_k127_3877860_2 ABC-2 type transporter K09694 - - 0.00000000000000000000000000000000000000000000000000000000000000004093 231.0
DYD3_k127_3883430_0 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000007606 219.0
DYD3_k127_3883430_1 Low affinity iron permease - - - 0.00000000000000000000000000000000001111 144.0
DYD3_k127_3883430_2 Belongs to the FPP GGPP synthase family K00805 - 2.5.1.30 0.00000000000000003113 85.0
DYD3_k127_3888690_0 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 496.0
DYD3_k127_3888690_1 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007309 345.0
DYD3_k127_3888690_2 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.000000000000000000000000000000000008582 148.0
DYD3_k127_3905303_0 ATPases associated with a variety of cellular activities K15600 - - 0.0000000000000008605 83.0
DYD3_k127_3905303_1 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.0000000000001353 85.0
DYD3_k127_3905303_2 Thioesterase superfamily - - - 0.000000009807 65.0
DYD3_k127_3905303_3 ASCH - - - 0.00001948 55.0
DYD3_k127_3913177_0 PFAM band 7 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008931 437.0
DYD3_k127_3913177_1 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002195 297.0
DYD3_k127_3913177_2 Cytidylyltransferase-like K00952 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.7.1 0.000000000000000000000000000000000000000000000003161 183.0
DYD3_k127_3916933_0 Protein of unknown function DUF58 - - - 0.00000000000000000001825 104.0
DYD3_k127_3916933_1 ATPase associated with various cellular activities, AAA_3 K03924 - - 0.0000000000000001335 81.0
DYD3_k127_3916933_2 PFAM Endonuclease exonuclease phosphatase K07004 - - 0.000000000001435 82.0
DYD3_k127_3930664_0 PFAM elongation factor Tu domain 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000001481 248.0
DYD3_k127_3930664_1 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a - - - 0.00000000000000000000000000000000000008074 165.0
DYD3_k127_3930664_2 Spermatogenesis associated 20 - GO:0000003,GO:0007276,GO:0007283,GO:0008150,GO:0019953,GO:0022414,GO:0032501,GO:0032504,GO:0044703,GO:0048232,GO:0048609,GO:0051704 - 0.0000000000000000000525 106.0
DYD3_k127_3996696_0 pfam abc1 K03688 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001961 291.0
DYD3_k127_3996696_1 FtsX-like permease family - - - 0.00000000000000000000000001501 123.0
DYD3_k127_3996696_2 Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella K07325 GO:0005575,GO:0005623,GO:0009288,GO:0042995,GO:0043226,GO:0043228,GO:0044464 - 0.0000000000009393 77.0
DYD3_k127_4014095_0 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein K00057 - 1.1.1.94 0.00000000000000000000000000000000000000000000000000000000000000000000000000004657 273.0
DYD3_k127_4014095_1 PFAM Phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000001317 226.0
DYD3_k127_4014095_2 Uncharacterized conserved protein (DUF2203) - - - 0.0000000000000000009505 92.0
DYD3_k127_4014095_3 Sugar-specific transcriptional regulator TrmB - - - 0.000000000006645 76.0
DYD3_k127_4015842_0 DEAD DEAH box helicase domain protein K03724 - - 3.901e-255 827.0
DYD3_k127_4015842_1 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703,K16792 - 4.2.1.114,4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000005581 270.0
DYD3_k127_4015842_2 Isocitrate isopropylmalate dehydrogenase K00052 - 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000002923 247.0
DYD3_k127_4015842_3 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000007437 148.0
DYD3_k127_4015842_4 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.00000000000000000000000000000000002204 156.0
DYD3_k127_4021501_1 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.00004647 53.0
DYD3_k127_4025202_0 Fibronectin-binding protein A N-terminus (FbpA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003558 437.0
DYD3_k127_4025202_1 PFAM Flavin reductase like domain - - - 0.000000000000000000000000000000000003721 145.0
DYD3_k127_4030451_0 - - - - 0.0000000000000000000000000000000000000000000006611 178.0
DYD3_k127_4030451_1 Bacterial-like globin K06886 - - 0.0000000000000000000000000000000000002457 158.0
DYD3_k127_4035078_0 RNase_H superfamily K07502 - - 0.0000000000001588 76.0
DYD3_k127_4035078_1 NurA - - - 0.000000000006341 76.0
DYD3_k127_4035078_2 PFAM FecR protein - - - 0.000000003406 72.0
DYD3_k127_4035078_3 - - - - 0.0000044 55.0
DYD3_k127_4035727_0 Helix-turn-helix domain K07731 - - 0.000000000000000000000000000000000000000000000000000000000000000000002683 244.0
DYD3_k127_4035727_1 Major facilitator superfamily - - - 0.00000000000000009801 90.0
DYD3_k127_4082160_0 small multidrug export protein - - - 0.0005873 52.0
DYD3_k127_4084188_0 Transcription elongation factor Spt5 K02601 - - 0.000000000000000000000000000000000009117 141.0
DYD3_k127_4084188_1 protein histidine kinase activity - - - 0.00000000000000000000004407 110.0
DYD3_k127_4084188_2 protein conserved in archaea - - - 0.0005174 53.0
DYD3_k127_4090027_0 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000001561 76.0
DYD3_k127_4090910_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 5.77e-227 728.0
DYD3_k127_4092342_0 Transcriptional regulator, ArsR family - - - 0.00000000000000000000000000000000001571 151.0
DYD3_k127_4110734_0 response to antibiotic K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001756 477.0
DYD3_k127_4110734_1 Phosphoribosyl transferase domain K07100 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007701 429.0
DYD3_k127_4110734_2 Component of the wyosine derivatives biosynthesis pathway that catalyzes the condensation of N-methylguanine with 2 carbon atoms from pyruvate to form the tricyclic 4-demethylwyosine (imG-14) on guanosine-37 of tRNA(Phe) K15449 - 4.1.3.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008637 370.0
DYD3_k127_4110734_3 dehydrogenase complex catalyzes the overall conversion of - - - 0.000000000000000000000000000001087 139.0
DYD3_k127_4110734_4 serine-type endopeptidase activity K08653 - 3.4.21.112 0.00000001523 64.0
DYD3_k127_4116084_0 O-methyltransferase - - - 0.000000000000000000000000000000000000000009441 162.0
DYD3_k127_4127470_0 PP-loop family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008352 304.0
DYD3_k127_4127470_1 Subtilase family K17734 - - 0.0000000000000000000000000000000000000003046 169.0
DYD3_k127_4127470_2 - - - - 0.00000000000000000002026 101.0
DYD3_k127_4128764_0 PFAM Glyoxalase bleomycin resistance protein dioxygenase K01759,K05606 - 4.4.1.5,5.1.99.1 0.0000000000000000000000000000000000000001569 163.0
DYD3_k127_4128764_1 replication factor A K07466 - - 0.00000000000002739 84.0
DYD3_k127_4128764_2 protein conserved in archaea - - - 0.00000006002 63.0
DYD3_k127_4132311_0 universal stress protein - - - 0.000000000001989 79.0
DYD3_k127_4132311_1 DSBA-like thioredoxin domain - - - 0.00000006569 55.0
DYD3_k127_4134780_0 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.00000000000000000000000000000000000000876 147.0
DYD3_k127_4139686_0 Tail sheath protein K06907 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001944 543.0
DYD3_k127_4139686_1 Protein of unknown function (DUF4255) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004335 391.0
DYD3_k127_4139686_2 T4-like virus tail tube protein gp19 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008962 269.0
DYD3_k127_4139686_3 - - - - 0.00000000000000000000000000000000000000000000005447 180.0
DYD3_k127_4139686_4 ATPase family associated with various cellular activities (AAA) - - - 0.0000000000000004981 89.0
DYD3_k127_4139686_5 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000001171 66.0
DYD3_k127_4163310_0 Sodium/hydrogen exchanger family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002601 401.0
DYD3_k127_4163310_1 HAD-hyrolase-like K07025 - - 0.0000001641 56.0
DYD3_k127_419383_0 Transcriptional regulator, TrmB - - - 0.00000000000000000000000000000006287 141.0
DYD3_k127_419383_1 histidine kinase A domain protein - - - 0.000000000000000004715 90.0
DYD3_k127_4220270_0 Histidine kinase K20974 - 2.7.13.3 0.00000000000000001388 93.0
DYD3_k127_4220270_1 NH(3)-dependent NAD( ) synthetase K01916 - 6.3.1.5 0.0000000000005299 80.0
DYD3_k127_4220270_2 PFAM Archaeal ATPase - - - 0.000000000003827 79.0
DYD3_k127_4221821_0 Belongs to the UPF0219 family K01641 - 2.3.3.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000791 466.0
DYD3_k127_4221821_1 PFAM Thiolase K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003932 426.0
DYD3_k127_4221821_2 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.00000000000000000000000000000000000003304 156.0
DYD3_k127_4221821_3 - - - - 0.0000000000000000000000000000000000002524 149.0
DYD3_k127_4230899_0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 - 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008874 501.0
DYD3_k127_4230899_1 Structure-specific nuclease with 5'-flap endonuclease and 5'-3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double- stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. Acts as a genome stabilization factor that prevents flaps from equilibrating into structurs that lead to duplications and deletions. Also possesses 5'-3' exonuclease activity on nicked or gapped double-stranded DNA K04799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002723 387.0
DYD3_k127_4230899_2 protein conserved in archaea K09722 - 6.3.2.36 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001942 284.0
DYD3_k127_4230899_3 Calcineurin-like phosphoesterase superfamily domain K07096 - - 0.00000000000000000000000000000000000000000000000000000000000000001044 234.0
DYD3_k127_4230899_4 Cell division protein 48 (CDC48), domain 2 K13525 - - 0.000000000000000000000000000000000000000000000000000000000006624 229.0
DYD3_k127_4230899_5 - - - - 0.00000000000000000000000000000000000000000000000006581 188.0
DYD3_k127_4230899_6 adenylyl cyclase CyaB K05873 - 4.6.1.1 0.00000000000000000000000009973 113.0
DYD3_k127_4230899_7 PFAM NUDIX hydrolase K03574 - 3.6.1.55 0.000001116 53.0
DYD3_k127_4234875_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005288 391.0
DYD3_k127_4234875_1 Protein of unknown function DUF58 - - - 0.0000000000000000000000000000000000002438 157.0
DYD3_k127_4239656_0 tRNA intron endonuclease, catalytic C-terminal domain K01170 GO:0000213,GO:0000379,GO:0000394,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0004549,GO:0006139,GO:0006388,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016892,GO:0016894,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:0140101,GO:1901360 4.6.1.16 0.00000000000000000000000000000000000000000000000000000000000000000001537 250.0
DYD3_k127_4239656_1 proteasome accessory factor PafA2 K20814 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0006464,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0010498,GO:0016787,GO:0016810,GO:0016811,GO:0017076,GO:0018193,GO:0018205,GO:0019538,GO:0019941,GO:0030163,GO:0030554,GO:0032446,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0036211,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0051603,GO:0070490,GO:0070647,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 3.5.1.119 0.0000000000000000000000000000000000000000000000000000000003433 218.0
DYD3_k127_4239656_2 Universal stress protein family - - - 0.000000000000000001554 98.0
DYD3_k127_4239656_3 COG COG0589 Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms - - - 0.00000000000003835 85.0
DYD3_k127_4239656_4 IclR helix-turn-helix domain - - - 0.000000008828 63.0
DYD3_k127_4239656_5 - - - - 0.0008986 51.0
DYD3_k127_4244651_0 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000000000001344 111.0
DYD3_k127_4244651_1 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000003153 91.0
DYD3_k127_4244651_2 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000008958 83.0
DYD3_k127_4256347_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 2.207e-210 671.0
DYD3_k127_4256347_1 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.3.5.3 0.000000000000000000000000000000000000000000000000000000000000000000001508 265.0
DYD3_k127_4258055_0 COGs COG2151 metal-sulfur cluster biosynthetic protein - - - 0.000000000000000000000000393 109.0
DYD3_k127_4258055_1 - - - - 0.00000001214 63.0
DYD3_k127_4258055_2 Belongs to the UPF0337 (CsbD) family - - - 0.0001992 53.0
DYD3_k127_4262030_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000514 591.0
DYD3_k127_4262785_0 Prolyl oligopeptidase family - - - 0.0000000000000000000000000000000000001788 152.0
DYD3_k127_4270279_0 Domain of unknown function (DUF4135) - - - 0.0000000000000000000000000000000007567 151.0
DYD3_k127_4270279_1 Peptidase M50 - - - 0.0000000000000000005382 100.0
DYD3_k127_4270279_2 Lanthionine synthetase C family protein - - - 0.00000000000000001611 97.0
DYD3_k127_4270279_3 very-long-chain-acyl-CoA dehydrogenase activity - - - 0.00000000000009172 84.0
DYD3_k127_4282377_0 PFAM chaperonin Cpn60 TCP-1 K22447 - - 8.664e-222 707.0
DYD3_k127_4282377_1 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006311 382.0
DYD3_k127_4282377_2 carboxymethylenebutenolidase activity K01061,K06889 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000002461 219.0
DYD3_k127_4282377_3 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000009281 158.0
DYD3_k127_4282377_4 COGs COG3316 Transposase and inactivated derivatives - - - 0.0000000000007408 75.0
DYD3_k127_4300841_0 PFAM PfkB domain protein K00856 - 2.7.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 377.0
DYD3_k127_4301735_0 Protein of unknown function (DUF692) K09930 - - 0.000000000000000000000000000000000000000000000000000000000000000006044 235.0
DYD3_k127_4301735_1 methyltransferase - - - 0.000000000000000000000000000000000000000000005419 173.0
DYD3_k127_4309671_0 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 GO:0003674,GO:0003824,GO:0008110,GO:0008483,GO:0016740,GO:0016769 2.6.1.9 0.0000000000000000000000000000000000000000000000000004242 200.0
DYD3_k127_4309671_1 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.0000000000000000000000000000000000000000000000004067 182.0
DYD3_k127_4309671_2 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.0000000000000000000000009251 109.0
DYD3_k127_4313499_0 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003779 413.0
DYD3_k127_4313499_1 Cleaves both 3' and 5' ssDNA extremities of branched DNA structures K07503 - - 0.0000000000000000000000000000000000000000000000004514 187.0
DYD3_k127_4334421_0 SMART Elongator protein 3 MiaB NifB K06936 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008111 275.0
DYD3_k127_4334421_1 Patch-forming domain C2 of tRNA-guanine transglycosylase K07557 GO:0002927,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 2.6.1.97 0.0000000000000000000000000000000000000000000000000000000000000000000000000001049 270.0
DYD3_k127_4352317_0 Belongs to the peptidase S8 family K17734 - - 0.0000000000000000000000000000000000000000000000000005764 206.0
DYD3_k127_4352317_1 NfeD-like C-terminal, partner-binding - - - 0.000000000000000000000004374 108.0
DYD3_k127_4357156_0 Subtilase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004117 297.0
DYD3_k127_4357156_1 deoxyhypusine monooxygenase activity K01387,K03301 - 3.4.24.3 0.00000000000000000000005482 111.0
DYD3_k127_4358296_0 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 6.496e-239 756.0
DYD3_k127_4358296_1 PD-(D/E)XK nuclease superfamily - - - 0.0000000000000000000000001538 115.0
DYD3_k127_4382828_0 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002961 330.0
DYD3_k127_4382828_1 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000734 273.0
DYD3_k127_4382828_2 Cation efflux family - - - 0.0000000000000000000000000000000000000000000000000000000000005141 223.0
DYD3_k127_4382828_3 response to antibiotic - - - 0.0000005911 59.0
DYD3_k127_4382828_4 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008855,GO:0009056,GO:0009057,GO:0009318,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0019439,GO:0032991,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901361,GO:1901575,GO:1902494 3.1.11.6 0.000008183 57.0
DYD3_k127_4386839_1 Psort location CytoplasmicMembrane, score - - - 0.00001157 58.0
DYD3_k127_4394213_0 COG0846 NAD-dependent protein deacetylases, SIR2 family K12410 - - 0.000000000000000000000000000000000000000000000000000002605 200.0
DYD3_k127_4398137_0 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K02639 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009536,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464 - 0.0000001976 64.0
DYD3_k127_4404932_0 PFAM PKD domain containing protein - - - 0.0000000000000009079 91.0
DYD3_k127_4404932_1 - - - - 0.0000006356 62.0
DYD3_k127_4404932_2 Tubulin like - - - 0.0008238 53.0
DYD3_k127_4414203_0 Protein of unknown function, DUF255 K06888 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002875 479.0
DYD3_k127_4414710_0 EVE domain-containing protein - - - 0.00000000000000000000000000000000000000000007267 171.0
DYD3_k127_4414710_1 Domain of unknown function (DUF309) K09763 - - 0.0001157 50.0
DYD3_k127_4414710_2 nuclease activity - - - 0.0004693 51.0
DYD3_k127_4414710_3 FemAB family - - - 0.0009855 51.0
DYD3_k127_442312_0 B3/4 domain K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002813 441.0
DYD3_k127_442312_1 snRNP Sm proteins K04796 GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 - 0.0000000000000002095 86.0
DYD3_k127_4425551_0 lactoylglutathione lyase activity K01239 - 3.2.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000006422 244.0
DYD3_k127_4425551_1 May function in recognizing stalled ribosomes, interact with stem-loop structures in stalled mRNA molecules, and effect endonucleolytic cleavage of the mRNA. May play a role in the release non-functional ribosomes and degradation of damaged mRNAs. Has endoribonuclease activity K06965 GO:0000956,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006401,GO:0006402,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0016075,GO:0019222,GO:0019439,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0034655,GO:0034660,GO:0034661,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0070651,GO:0070966,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:1901360,GO:1901361,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1903008 - 0.00000000000000000000000000000000000000000000000000000000000000000000185 249.0
DYD3_k127_4444059_0 Prokaryotic homologs of the JAB domain - - - 0.000000000000000000000000000003074 132.0
DYD3_k127_4444059_1 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.000000000000000002121 100.0
DYD3_k127_4444059_2 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00000000000000003864 93.0
DYD3_k127_4444059_3 protein conserved in archaea K09723 - - 0.000000009835 67.0
DYD3_k127_4446933_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005149 301.0
DYD3_k127_4446933_1 Protein of unknown function DUF58 - - - 0.000000000000001397 88.0
DYD3_k127_4454755_0 polyketide cyclase - - - 0.000000000000000000000000000000000000000000004935 175.0
DYD3_k127_4454755_1 NADPH:quinone reductase activity - - - 0.000000000000000000004757 95.0
DYD3_k127_4454755_2 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000006524 66.0
DYD3_k127_4467533_0 Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase K07559 - - 0.000000000000000000000000000000000000000000000000000000000000000000001679 243.0
DYD3_k127_4467533_1 archaeal coiled-coil protein - - - 0.00000000000000000000000000000000000000000002007 173.0
DYD3_k127_4467533_2 Histidine kinase-like ATPases K07636,K07768 - 2.7.13.3 0.00000000000000000000001911 102.0
DYD3_k127_4467533_3 phosphorelay signal transduction system - - - 0.000000000000000000001487 103.0
DYD3_k127_4467533_4 EamA-like transporter family - - - 0.0000000009018 70.0
DYD3_k127_4471014_0 COG0607 Rhodanese-related sulfurtransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000005024 249.0
DYD3_k127_4471014_1 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000000000000000000000000000000000000000000001077 224.0
DYD3_k127_4471014_2 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.00000000000000000000000000000000000000000000000000000009912 205.0
DYD3_k127_4471014_3 PFAM glycosyl transferase group 1 - - - 0.00000000000000000000003309 115.0
DYD3_k127_4471014_4 Rhodanese Homology Domain - - - 0.0000000000000000000001634 103.0
DYD3_k127_4471014_5 Rhodanese Homology Domain - - - 0.000000000000000000001083 106.0
DYD3_k127_4471014_6 Zn-dependent metallo-hydrolase RNA specificity domain K07577,K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.000000000000000000194 98.0
DYD3_k127_4471014_7 Transcriptional regulator - - - 0.00000000000000002022 91.0
DYD3_k127_4471014_8 lysyltransferase activity K07027 - - 0.00000002103 66.0
DYD3_k127_4482203_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007134 330.0
DYD3_k127_4482203_1 Catalyzes the NAD( )-dependent oxidative deamination of L-alanine to pyruvate, and the reverse reaction, the reductive amination of pyruvate K01750,K19244 - 1.4.1.1,4.3.1.12 0.0000000000000000000000000000000000000000000000000000002689 201.0
DYD3_k127_4482203_2 Uracil DNA glycosylase superfamily K03649 - 3.2.2.28 0.00000000000000000000000000000000002147 144.0
DYD3_k127_4482203_3 geranylgeranyl reductase activity K14266 - 1.14.19.9 0.000000000000000000000000000000006363 142.0
DYD3_k127_4482203_4 Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing elongation complexes. Seems to translocate with the RNA polymerase following initiation and acts by binding to the non template strand of the transcription bubble in elongation complexes K03136 - - 0.000000000000000000000000006442 116.0
DYD3_k127_4482203_5 Zn-dependent hydrolase, glyoxylase - - - 0.00000000000000004678 94.0
DYD3_k127_4482203_6 - - - - 0.0000000001673 73.0
DYD3_k127_4482203_7 Esterase, phb depolymerase family - - - 0.0000002241 59.0
DYD3_k127_4482203_8 protein conserved in archaea - - - 0.00003451 56.0
DYD3_k127_4488342_0 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005642 261.0
DYD3_k127_4488342_1 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.0000000000000000000000000000000001142 150.0
DYD3_k127_4516240_0 metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain K07050 - - 0.0000000000000000000000000000000000000000000000000002504 209.0
DYD3_k127_4518453_0 Competence protein K02238 - - 0.0001249 55.0
DYD3_k127_4519587_0 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000001557 233.0
DYD3_k127_452484_0 Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions K02201 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 0.00000000000000000000000000000000000000000000006042 180.0
DYD3_k127_4528260_0 Domain of unknown function (DUF1611_N) Rossmann-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000001178 242.0
DYD3_k127_4528260_1 Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB) K01683,K18983,K19802 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005975,GO:0005996,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016043,GO:0016052,GO:0016829,GO:0016835,GO:0016836,GO:0019321,GO:0019323,GO:0019566,GO:0019568,GO:0019571,GO:0022607,GO:0043167,GO:0043169,GO:0043933,GO:0044085,GO:0044238,GO:0044281,GO:0044282,GO:0046365,GO:0046372,GO:0046872,GO:0047675,GO:0051259,GO:0065003,GO:0071704,GO:0071840,GO:1901575 4.2.1.5,5.1.1.20,5.5.1.27 0.00001766 55.0
DYD3_k127_4558929_0 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03471 - 3.1.26.4 0.0000000000000000000000000000000000000000000001352 182.0
DYD3_k127_4558929_1 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000006747 145.0
DYD3_k127_4566795_0 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000005771 160.0
DYD3_k127_4566795_2 Chromate transporter K07240 - - 0.0000000000001911 74.0
DYD3_k127_4571956_0 Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1-phosphate (G1P). The G1P thus generated is used as the glycerophosphate backbone of phospholipids in the cellular membranes of Archaea K00096 - 1.1.1.261 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004846 360.0
DYD3_k127_4571956_1 xanthine dehydrogenase activity K04108 - 1.3.7.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006287 274.0
DYD3_k127_4571956_2 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM CutM-like protein K03519,K13479 - 1.17.1.4,1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000565 233.0
DYD3_k127_4571956_3 Belongs to the UPF0179 family K09730 - - 0.000000000000002268 81.0
DYD3_k127_4586217_0 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001547 316.0
DYD3_k127_4590444_0 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000002249 188.0
DYD3_k127_4590444_1 to orf3 of fosmid clone 4B7mr3 - - - 0.0000000006324 66.0
DYD3_k127_4601943_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003249 372.0
DYD3_k127_4601943_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family K00558 - 2.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001995 290.0
DYD3_k127_4601943_2 Belongs to the Dps family K04047 - - 0.0000000000000000000000000000000000000000001539 176.0
DYD3_k127_4601943_3 Protein of unknown function DUF58 - - - 0.00000000000000000000000000000005305 141.0
DYD3_k127_4610799_0 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.0000000000000003764 90.0
DYD3_k127_4610799_1 PFAM CheC domain protein K03410 - - 0.00000000000349 71.0
DYD3_k127_4617871_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01907 - 6.2.1.16 2.78e-203 649.0
DYD3_k127_4617871_1 tRNA synthetases class II (D, K and N) K01893 - 6.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005885 411.0
DYD3_k127_4633264_0 Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P). This reaction is the first ether-bond-formation step in the biosynthesis of archaeal membrane lipids K17104 GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 2.5.1.41 0.0000000000000000000000000000000000000000000000000000000000000004831 231.0
DYD3_k127_4633264_1 UbiA prenyltransferase family K17105 - 2.5.1.42 0.000000000000000000000000000008327 130.0
DYD3_k127_4634791_0 nucleic acid binding protein containing the AN1-type Zn-finger K07059 - - 0.0000000000000000000000000000000000000000000000000000000001501 215.0
DYD3_k127_4634791_1 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.00000000000000000000000000000000000000000007442 181.0
DYD3_k127_4634791_2 MazG nucleotide pyrophosphohydrolase domain - - - 0.000000000000000000000000000000005648 136.0
DYD3_k127_4634791_3 D,D-heptose 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.00000000000000000000000000002989 131.0
DYD3_k127_4643399_0 RibD C-terminal domain K14654 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006139,GO:0006725,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009451,GO:0009987,GO:0016070,GO:0016491,GO:0016614,GO:0016616,GO:0017144,GO:0018130,GO:0034641,GO:0036094,GO:0042364,GO:0042726,GO:0042727,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0046983,GO:0048037,GO:0050661,GO:0050662,GO:0051287,GO:0055114,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.1.1.302 0.000000000000000000000000000000000000000000000000000000000001976 216.0
DYD3_k127_4643399_1 PFAM SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000001623 184.0
DYD3_k127_4643399_2 Tellurite resistance protein TerB - - - 0.00000000000000000000000000003044 128.0
DYD3_k127_4653106_0 Responsible for synthesis of pseudouridine from uracil- 54 and uracil-55 in the psi GC loop of transfer RNAs K07583 - 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 349.0
DYD3_k127_4653106_1 Glycosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000699 225.0
DYD3_k127_4653106_2 Helix-hairpin-helix motif K07572 - - 0.0000000000000000000000000000000000000000000000000000000000348 211.0
DYD3_k127_4653106_3 Belongs to the eukaryotic ribosomal protein eL21 family K02889 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000005928 105.0
DYD3_k127_4653106_4 RNA polymerase K03051 - 2.7.7.6 0.0000000000002669 75.0
DYD3_k127_4653106_5 PFAM Haloacid dehalogenase-like hydrolase - - - 0.00000000003067 76.0
DYD3_k127_4653106_6 Transcription elongation factor Spt5 K02601 - - 0.00000000007678 62.0
DYD3_k127_4662100_0 Peptidase S8 and S53 subtilisin kexin sedolisin K01342,K14645 - 3.4.21.62 0.0000000000000000000000000000000000000000000000000000000002726 231.0
DYD3_k127_4662100_1 Fibronectin type III domain - - - 0.00000000000000000000000000005579 136.0
DYD3_k127_4662100_2 Bacterial pre-peptidase C-terminal domain - - - 0.000000000001142 82.0
DYD3_k127_4662100_3 PrcB C-terminal - - - 0.0000000002453 71.0
DYD3_k127_4662100_4 PFAM Haloacid dehalogenase domain protein hydrolase K01079 - 3.1.3.3 0.00003093 54.0
DYD3_k127_4669635_0 TIGRFAM phosphate ABC transporter K02040 - - 0.0000000000000000000000000000003307 143.0
DYD3_k127_4669635_1 TIGRFAM phosphohistidine phosphatase SixA K08296 - - 0.00000000000000000286 96.0
DYD3_k127_4669635_2 deoxyhypusine monooxygenase activity K08884 - 2.7.11.1 0.00000000668 70.0
DYD3_k127_4669635_3 Glycogen debranching enzyme - - - 0.0008835 45.0
DYD3_k127_4683094_0 PQQ-like domain K05889,K12132 - 1.1.2.6,2.7.11.1 0.000000000000000000000000000000000000000000000000000000009055 217.0
DYD3_k127_4708285_0 Fibronectin type III domain - - - 0.000000000000000000000000000000000000000000001302 191.0
DYD3_k127_4708285_1 Immune inhibitor A peptidase M6 K09607 - - 0.00003376 58.0
DYD3_k127_4710308_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 0.00000000000000000000000000000000386 130.0
DYD3_k127_4745292_0 TIGRFAM geranylgeranyl reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000004648 247.0
DYD3_k127_4745292_1 PFAM cobalamin adenosyltransferase K00798 - 2.5.1.17 0.00000000000000000000000000000000000000009803 160.0
DYD3_k127_4745292_2 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K04794 - 3.1.1.29 0.00000000000000000000000000000000003879 137.0
DYD3_k127_4745292_3 threonine efflux protein - - - 0.00000000000000000000000000002682 125.0
DYD3_k127_4745292_4 - - - - 0.0000000000000000000000178 116.0
DYD3_k127_4745292_5 6-O-methylguanine DNA methyltransferase, DNA binding domain K07443 - - 0.000000000000002824 83.0
DYD3_k127_4745292_6 peptidase activity - - - 0.0000000005226 60.0
DYD3_k127_4745292_7 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000002621 59.0
DYD3_k127_4750340_0 Serine/Threonine protein kinases, catalytic domain K12132 - 2.7.11.1 0.00000000000000000000000000000000001039 156.0
DYD3_k127_4750340_1 Forkhead associated domain K10644 GO:0000075,GO:0000166,GO:0000209,GO:0000278,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0007049,GO:0007093,GO:0007346,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010604,GO:0016567,GO:0016604,GO:0016605,GO:0016740,GO:0019222,GO:0019538,GO:0019787,GO:0019941,GO:0022402,GO:0030162,GO:0030163,GO:0031323,GO:0031325,GO:0031329,GO:0031331,GO:0031396,GO:0031398,GO:0031399,GO:0031401,GO:0031647,GO:0031648,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032434,GO:0032436,GO:0032446,GO:0036094,GO:0036211,GO:0042176,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0045732,GO:0045786,GO:0045862,GO:0045930,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051603,GO:0051726,GO:0060255,GO:0061136,GO:0061630,GO:0061659,GO:0065007,GO:0065008,GO:0070013,GO:0070647,GO:0071704,GO:0080090,GO:0097159,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901800,GO:1903047,GO:1903050,GO:1903052,GO:1903320,GO:1903322,GO:1903362,GO:1903364,GO:2000058,GO:2000060 2.3.2.27 0.0006817 46.0
DYD3_k127_4752826_0 ATP binding protein K06927 - 6.3.1.14 0.00000000000000000000000000000000000000000000000000000000002047 216.0
DYD3_k127_4752826_1 Carbon-nitrogen hydrolase K18540 - 3.5.1.100 0.0000000000000000000000000000000000000000000000001465 189.0
DYD3_k127_4752826_2 transcriptional - - - 0.00000000000000000000000615 110.0
DYD3_k127_4752826_3 - - - - 0.000006537 52.0
DYD3_k127_4777543_0 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000003412 131.0
DYD3_k127_4818544_0 SMART PDZ DHR GLGF domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007379 463.0
DYD3_k127_4818544_1 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004013 281.0
DYD3_k127_4818544_2 Enoyl-CoA hydratase isomerase K15866 - 5.3.3.18 0.0000000000000000000000000000000000000000000000000000002051 203.0
DYD3_k127_4818544_3 membrane - - - 0.000000000000000001452 100.0
DYD3_k127_4826062_0 Zn_pept K05996 - 3.4.17.18 0.000000000000000000002029 109.0
DYD3_k127_4826062_1 protein conserved in archaea - - - 0.00001477 58.0
DYD3_k127_4827135_0 PFAM Ribonuclease BN-like family K07058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000142 289.0
DYD3_k127_4827135_1 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K07083,K11785 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000368 270.0
DYD3_k127_4827135_2 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.00000000000000000000000000000000000000001236 159.0
DYD3_k127_4827860_0 Involved in regulation of DNA replication K10725 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000234 535.0
DYD3_k127_4834655_0 deoxyhypusine monooxygenase activity - - - 0.000000000000000000000000001577 130.0
DYD3_k127_4840790_0 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.0000000000000000000000000000000000000000000000000000000000000000000000004736 259.0
DYD3_k127_4840790_1 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.00000000000000000000000000000000000000000000000000000000000001573 237.0
DYD3_k127_4886614_0 Sugar-specific transcriptional regulator TrmB - - - 0.000000000001312 78.0
DYD3_k127_4886614_1 Sugar-specific transcriptional regulator TrmB - - - 0.000000005237 67.0
DYD3_k127_4887985_0 metal-dependent hydrolase with the TIM-barrel fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007285 287.0
DYD3_k127_4887985_1 Pfam Sodium hydrogen exchanger K03455 - - 0.00000000000000000000000000000001152 146.0
DYD3_k127_4889191_0 Malic enzyme, NAD binding domain K00029 - 1.1.1.40 3.949e-298 936.0
DYD3_k127_4889191_1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000002569 262.0
DYD3_k127_4889191_2 Enoyl-CoA hydratase/isomerase K15866 - 5.3.3.18 0.00000000000000000000000000000000000000000000126 179.0
DYD3_k127_4889191_3 Protein of unknown function (DUF1684) K09164 - - 0.0000000000000000000000000000000006691 138.0
DYD3_k127_4896112_0 RibD C-terminal domain - - - 0.00000000000000000000000000000000000000000000004673 175.0
DYD3_k127_4896112_1 transcriptional regulator - - - 0.0000000117 63.0
DYD3_k127_4896278_0 Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with geranylgeranyl diphosphate (GGPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30E,34E,38E)-undecaprenyl diphosphate (tritrans,heptacis-UPP). It is probably the precursor of glycosyl carrier lipids K15888 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000268 315.0
DYD3_k127_4896278_1 eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA K03238 - - 0.000000000000000000000000000000000000000000000000000005437 196.0
DYD3_k127_4896278_2 Belongs to the UPF0173 family - - - 0.0000000000000000000000000000000000000000000000001053 185.0
DYD3_k127_4896278_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000001457 179.0
DYD3_k127_4896278_4 protein conserved in archaea - - - 0.0000000000008402 81.0
DYD3_k127_4897249_0 phosphoesterase RecJ domain protein K07463 - - 0.000000000198 71.0
DYD3_k127_4897249_1 membrane K08971 - - 0.0001367 54.0
DYD3_k127_4904178_0 ABC transporter, ATP-binding protein K06158 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005335 375.0
DYD3_k127_4915574_0 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 - 2.4.2.18,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000226 353.0
DYD3_k127_4915574_1 Peptidase C26 K01658,K01664 GO:0000162,GO:0003674,GO:0003824,GO:0004049,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005950,GO:0006082,GO:0006520,GO:0006568,GO:0006575,GO:0006576,GO:0006586,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009108,GO:0009308,GO:0009309,GO:0009396,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0016829,GO:0016830,GO:0016833,GO:0018130,GO:0019438,GO:0019752,GO:0032991,GO:0034641,GO:0042398,GO:0042401,GO:0042430,GO:0042435,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0046820,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 2.6.1.85,4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000003921 239.0
DYD3_k127_4938459_0 PFAM Aminotransferase, class I - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001976 281.0
DYD3_k127_4938459_1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases K02503 - - 0.0000000000000000000000000000001306 138.0
DYD3_k127_4943090_0 Catalyzes the decarboxylation of L-tyrosine to produce tyramine for methanofuran biosynthesis. Can also catalyze the decarboxylation of L-aspartate to produce beta-alanine for coenzyme A (CoA) biosynthesis K18933 - 4.1.1.11,4.1.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003186 308.0
DYD3_k127_4943090_1 Diphthamide K07561 - 2.5.1.108 0.0000000000000000000000000000000000000000000000000000000000000000000000000007643 269.0
DYD3_k127_4943090_2 Catalyzes a salvage reaction resulting in the formation of IMP that is energically less costly than de novo synthesis K00759 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.4.2.7 0.00000000000000000000000000000000000000000000000000000002442 201.0
DYD3_k127_4943090_3 PFAM tRNA methyltransferase complex GCD14 subunit K07442 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0031515,GO:0032991,GO:0034708,GO:0043527,GO:0044424,GO:0044444,GO:0044464,GO:1902494,GO:1990234 2.1.1.219,2.1.1.220 0.00000000000000000000000000000000000000000000000000119 194.0
DYD3_k127_4943090_4 PemK-like, MazF-like toxin of type II toxin-antitoxin system - - - 0.000000000000000000002486 101.0
DYD3_k127_4943090_5 Antidote-toxin recognition MazE, bacterial antitoxin - - - 0.00007475 49.0
DYD3_k127_4948302_0 PFAM short chain dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003017 400.0
DYD3_k127_4948302_1 DHH family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002791 406.0
DYD3_k127_4948302_2 TIGRFAM TraB family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002856 295.0
DYD3_k127_4948302_3 Phospholipase D Transphosphatidylase K06131,K06132,K06915 - - 0.00000000000000000000000000000000000000000000000000000000000000000000008747 258.0
DYD3_k127_4948302_4 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.000000000000000000278 104.0
DYD3_k127_4948302_6 Copper binding proteins, plastocyanin/azurin family - - - 0.0006607 53.0
DYD3_k127_4981912_0 ERAP1-like C-terminal domain K01256,K08776 - 3.4.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003319 586.0
DYD3_k127_4981912_1 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.0000000000000000000000000000000000000000000000000000000000000000112 236.0
DYD3_k127_4981912_2 Iron permease, FTR1 K07243 - - 0.000000000000000000000000000000000000000004864 175.0
DYD3_k127_4981912_3 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000404 161.0
DYD3_k127_4985140_0 Belongs to the LDH MDH superfamily K00024 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000325 266.0
DYD3_k127_4985140_1 Alternative locus ID K13693 - 2.4.1.266 0.00000000000000000000000000000000001894 140.0
DYD3_k127_4985140_2 regulation of pentose-phosphate shunt K06236,K19069 - 1.1.99.18 0.00000000000000000000000000001904 125.0
DYD3_k127_4985140_3 General stress protein K06884 - - 0.0000000000000000000002763 102.0
DYD3_k127_4985140_4 PFAM ParB domain protein nuclease K03497 - - 0.000000000000000000002455 106.0
DYD3_k127_4985140_5 - - - - 0.00000000000000001672 83.0
DYD3_k127_4985140_6 DNA replication initiation - - - 0.0000005062 57.0
DYD3_k127_5009344_0 Met-10+ like-protein K07055 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 2.5.1.114 0.0000000000000000000000000000000000000000000000000000000000000001091 233.0
DYD3_k127_5009344_1 pre-rRNA processing protein involved in ribosome biogenesis K09140 - - 0.000000000000000000000000000000000000000000000000002942 187.0
DYD3_k127_5017585_0 Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation K07130 GO:0003674,GO:0003824,GO:0004061,GO:0005488,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019439,GO:0019441,GO:0019752,GO:0032787,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043167,GO:0043169,GO:0043420,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0070189,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 3.5.1.9 0.000000000000000000000000000000000000000000000003394 183.0
DYD3_k127_5019214_0 Adenine glycosylase K03575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007572 268.0
DYD3_k127_5019214_1 protein methyltransferase activity - - - 0.0000000000000000000000000000000000186 145.0
DYD3_k127_5026808_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007814 279.0
DYD3_k127_5026808_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000004394 158.0
DYD3_k127_5034065_0 homolog of phage Mu protein gp47 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000331 565.0
DYD3_k127_5034065_1 Late control gene D protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004469 413.0
DYD3_k127_5034065_2 Two component regulator propeller - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001419 422.0
DYD3_k127_5034065_3 homolog of phage Mu protein gp47 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002003 382.0
DYD3_k127_5034065_4 domain, Protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002677 316.0
DYD3_k127_5034065_5 Rhs element vgr protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003688 279.0
DYD3_k127_5034065_6 - - - - 0.0000000000000000000000000000000000000000000000000004354 192.0
DYD3_k127_5034065_7 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000003411 197.0
DYD3_k127_5034065_8 - K06903 - - 0.000000000000000000000000009952 124.0
DYD3_k127_5034065_9 LysM domain - - - 0.000000000000000000148 100.0
DYD3_k127_5073238_0 Mechanosensitive ion channel K03442 - - 0.0000000000004856 81.0
DYD3_k127_5111021_0 PFAM DEAD DEAH box helicase domain protein K03654 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005467 443.0
DYD3_k127_5111021_1 Belongs to the DEAD box helicase family K05592 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005794 419.0
DYD3_k127_5111021_2 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.000000000000000000000000000000000000000000000001493 190.0
DYD3_k127_5111021_3 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.000000000000000000000000000000000000000007783 172.0
DYD3_k127_5111021_4 Domain of unknown function (DUF4442) - - - 0.0000000000000000000000000004471 118.0
DYD3_k127_5111021_5 PFAM thioesterase superfamily - - - 0.000001047 61.0
DYD3_k127_5118112_0 Dyp-type peroxidase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007835 301.0
DYD3_k127_5118112_1 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.00000000000000000000000000000000000000000001487 177.0
DYD3_k127_5118112_2 PFAM molybdopterin biosynthesis MoaE protein K03635,K21142 - 2.8.1.12 0.0000000000000000000000000000000000000000606 160.0
DYD3_k127_5118112_3 May be involved in the biosynthesis of molybdopterin K03638 - 2.7.7.75 0.0000000000000000000000000000000000007883 153.0
DYD3_k127_51243_0 aldo keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002968 293.0
DYD3_k127_51243_1 Structure-specific nuclease with 5'-flap endonuclease and 5'-3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double- stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. Acts as a genome stabilization factor that prevents flaps from equilibrating into structurs that lead to duplications and deletions. Also possesses 5'-3' exonuclease activity on nicked or gapped double-stranded DNA K04799 - - 0.000000000000000000000000000000000000000009944 164.0
DYD3_k127_51243_2 Belongs to the glycosyl hydrolase family 6 K01218 - 3.2.1.78 0.000000000000005457 89.0
DYD3_k127_51243_3 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.000000000001719 78.0
DYD3_k127_51243_4 Peptidase inhibitor I42 K14475 - - 0.000001044 60.0
DYD3_k127_5130633_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 1.287e-269 869.0
DYD3_k127_5130633_1 Glyoxalase-like domain K01759 - 4.4.1.5 0.000007367 59.0
DYD3_k127_5130633_2 Transmembrane exosortase (Exosortase_EpsH) - - - 0.00004987 57.0
DYD3_k127_5143094_0 Pyridoxal-phosphate dependent enzyme K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000003964 257.0
DYD3_k127_5149774_0 Domain of unknown function (DUF4383) - - - 0.00000000000000001466 88.0
DYD3_k127_5149774_1 GDP-mannose mannosyl hydrolase activity K01515,K03574,K08310,K19965 - 3.6.1.13,3.6.1.55,3.6.1.67 0.0000000000001311 80.0
DYD3_k127_5149774_2 Domain of unknown function (DUF4383) - - - 0.0000000002332 67.0
DYD3_k127_5149774_3 Forkhead associated domain - - - 0.000001143 59.0
DYD3_k127_5149887_0 DEAD DEAH box helicase domain protein K10896 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009769 621.0
DYD3_k127_5149887_1 PFAM transferase hexapeptide repeat containing protein - - - 0.00000000000000000000000000000000000000000000002897 179.0
DYD3_k127_5149887_2 MOSC domain - - - 0.000000000000000000000000000000000000000000005477 168.0
DYD3_k127_5149887_3 CutA1 divalent ion tolerance protein K03926 - - 0.0000000000000000000000101 104.0
DYD3_k127_5149887_4 ACT domain - - - 0.00000000003047 78.0
DYD3_k127_5156352_0 Ribosomal protein LX K02944 - - 0.00003223 51.0
DYD3_k127_5156352_1 Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding K04797 - - 0.0005558 48.0
DYD3_k127_5161081_0 DNA methylase K00590 - 2.1.1.113 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006582 306.0
DYD3_k127_5161081_1 Glycosyl transferase family 21 - - - 0.0000005872 55.0
DYD3_k127_5161081_2 COG3794 Plastocyanin - - - 0.0000005956 57.0
DYD3_k127_5164415_0 deoxyhypusine monooxygenase activity K08884 - 2.7.11.1 0.0000000001211 76.0
DYD3_k127_5165717_0 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007564 607.0
DYD3_k127_5165717_1 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002165 286.0
DYD3_k127_5165717_2 DJ-1/PfpI family K05520 - 3.5.1.124 0.0000000000000000000000000000000000000000000000000008482 191.0
DYD3_k127_5165717_3 - - - - 0.000000000001648 76.0
DYD3_k127_5165717_4 Response regulator receiver - - - 0.00000000328 64.0
DYD3_k127_5168321_0 PFAM Transketolase K00615 - 2.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003448 356.0
DYD3_k127_5168321_1 PFAM Transketolase, C-terminal domain K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007685 353.0
DYD3_k127_5168321_2 Endonuclease related to archaeal Holliday junction resolvase - - - 0.00008768 54.0
DYD3_k127_5182872_0 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003092 276.0
DYD3_k127_5182872_1 nucleoside 2-deoxyribosyltransferase - - - 0.000008079 55.0
DYD3_k127_5189481_0 PFAM thioesterase superfamily protein K07107 - - 0.0000000000000000000001505 104.0
DYD3_k127_5194720_0 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.000000000000000000000000000000000000000000000000000000000000001615 228.0
DYD3_k127_5194720_1 COG0681 Signal peptidase I K13280 - 3.4.21.89 0.0000000000000836 81.0
DYD3_k127_5194720_2 PFAM Uracil-DNA glycosylase superfamily K10800 - - 0.0000153 57.0
DYD3_k127_5201817_0 TIGRFAM CRISPR-associated protein Cas4 K07464 - 3.1.12.1 0.000000000000000000000000000000000000002082 158.0
DYD3_k127_5201817_1 - - - - 0.0000000000001319 82.0
DYD3_k127_5201817_2 Transcriptional regulator - - - 0.0000000000002616 84.0
DYD3_k127_5205029_0 Peptidase family S51 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003153 267.0
DYD3_k127_5207487_0 RecB family - - - 0.000000000000000000000000000000000001329 156.0
DYD3_k127_5207487_1 Protein of unknown function (DUF4242) - - - 0.0001126 49.0
DYD3_k127_5207487_2 metal-binding protein - - - 0.0002001 48.0
DYD3_k127_5213403_0 ATPase P-type (Transporting), HAD superfamily, subfamily IC K01535,K01537 - 3.6.3.6,3.6.3.8 0.00000000000000000000000000002693 119.0
DYD3_k127_5213403_1 Histidine kinase - - - 0.00000000000000009022 93.0
DYD3_k127_5213403_2 PFAM helix-turn-helix domain protein K03627 - - 0.0000000000007177 81.0
DYD3_k127_5231936_0 oligoendopeptidase F - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002258 276.0
DYD3_k127_5231936_1 Thioesterase superfamily protein - - - 0.000000000562 73.0
DYD3_k127_5231936_2 - - - - 0.000001334 57.0
DYD3_k127_5235560_0 Ring-cleavage extradiol dioxygenase - - - 0.00000000000000000000000000000000000005808 153.0
DYD3_k127_5235560_1 - - - - 0.0000000000000000000006439 104.0
DYD3_k127_5235560_2 Tetratricopeptide repeat - - - 0.00000000003496 75.0
DYD3_k127_5245713_0 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000002101 182.0
DYD3_k127_5268380_0 SnoaL-like domain - - - 0.0000000001135 68.0
DYD3_k127_5268380_1 Membrane-flanked domain-containing protein - - - 0.0000001286 64.0
DYD3_k127_5303252_0 DNA methylase K00571 - 2.1.1.72 0.0000000000000000000000000000000006923 142.0
DYD3_k127_5303252_1 N-4 methylation of cytosine K00571 - 2.1.1.72 0.000000001458 68.0
DYD3_k127_5311398_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 324.0
DYD3_k127_5311398_1 Ferritin-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002874 277.0
DYD3_k127_5311398_2 EamA-like transporter family - - - 0.00000000000000000000000000009089 128.0
DYD3_k127_53246_0 able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 452.0
DYD3_k127_53246_1 - - - - 0.0000000000000000000000000000000000000000000004603 179.0
DYD3_k127_53246_2 - - - - 0.000000000000000000000000000000003602 139.0
DYD3_k127_53246_3 Trm112p-like protein - - - 0.000000000000000001922 89.0
DYD3_k127_53246_4 protein conserved in archaea - - - 0.000000000449 68.0
DYD3_k127_53246_5 protein conserved in archaea - - - 0.00000004502 62.0
DYD3_k127_53246_6 protein conserved in archaea - - - 0.0000017 58.0
DYD3_k127_53246_7 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000009455 53.0
DYD3_k127_53246_8 Oligosaccharyl transferase STT3 subunit K07151 - 2.4.99.18 0.0008765 51.0
DYD3_k127_5330713_0 Biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009424 476.0
DYD3_k127_5330713_1 Conserved carboxylase domain K01960 - 6.4.1.1 0.00000000000005675 86.0
DYD3_k127_5352807_0 dehydrogenase K18369 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002175 399.0
DYD3_k127_5352807_1 Rhodanese Homology Domain K01011,K21028 - 2.8.1.1,2.8.1.11,2.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002945 373.0
DYD3_k127_5352807_2 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000028 349.0
DYD3_k127_5352807_3 Belongs to the class-I aminoacyl-tRNA synthetase family K01866 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005488,GO:0005515,GO:0005524,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006437,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0031406,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0042802,GO:0042803,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0046983,GO:0071704,GO:0072545,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002188 287.0
DYD3_k127_5352807_4 protein conserved in archaea - - - 0.0000000000000000000000000000000000000000000000000000003887 207.0
DYD3_k127_5352807_5 Domain of unknown function (DUF2383) - - - 0.0000000000000000000000000005076 119.0
DYD3_k127_5352807_6 Fic family - - - 0.000000000000000005951 96.0
DYD3_k127_5352807_7 COG1073 Hydrolases of the alpha beta superfamily K06889,K07397 - - 0.000000000001341 68.0
DYD3_k127_5352807_8 Winged helix-turn-helix DNA-binding - - - 0.000001025 56.0
DYD3_k127_5352807_9 Helix-turn-helix domain - - - 0.0000868 53.0
DYD3_k127_5353854_0 Subtilase family - - - 0.000000000000000000001058 109.0
DYD3_k127_5353854_1 alginic acid biosynthetic process K20276 - - 0.00001654 53.0
DYD3_k127_5362565_0 TIGRFAM oligopeptide dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02032,K10823 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001766 398.0
DYD3_k127_5362565_1 Belongs to the ABC transporter superfamily K02031 - - 0.00000000000000000000000000000000000000000000000000000000000000000000175 242.0
DYD3_k127_5362565_2 Cbs domain - - - 0.00000000003464 73.0
DYD3_k127_5362565_3 LVIVD repeat - - - 0.0000001506 64.0
DYD3_k127_5404959_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002415 517.0
DYD3_k127_5408613_0 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.00000000000000001283 96.0
DYD3_k127_5408613_1 Belongs to the UPF0125 (RnfH) family K03154,K09801 - - 0.0009869 44.0
DYD3_k127_5411322_0 Periplasmic binding protein - - - 0.00000000000000000000000001337 117.0
DYD3_k127_5411322_1 PFAM Transmembrane exosortase (Exosortase_EpsH) - - - 0.00000000000000000000000001688 120.0
DYD3_k127_541367_0 PFAM Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005232 277.0
DYD3_k127_541367_1 TIGRFAM DNA polymerase (pol2) K02319 - 2.7.7.7 0.00000009404 62.0
DYD3_k127_541932_0 PFAM peptidase U32 K08303 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003078 541.0
DYD3_k127_541932_1 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.0004248 49.0
DYD3_k127_5439864_0 B12 binding domain K01849 - 5.4.99.2 0.000000000000000000000000000000000000000000000000000001706 194.0
DYD3_k127_5439864_1 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.00000000000000000000000000000000000000000001374 184.0
DYD3_k127_5448715_0 aminopeptidase activity - - - 0.0000000000001098 84.0
DYD3_k127_548319_0 Cysteine desulfurase K11717 - 2.8.1.7,4.4.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003363 316.0
DYD3_k127_548319_1 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.00000000000000000000000000000000000000000000000000001962 197.0
DYD3_k127_548319_2 CorA-like Mg2+ transporter protein K03284 - - 0.0000000000000000000000005611 107.0
DYD3_k127_548319_3 L-seryl-tRNA selenium transferase - - - 0.0005894 52.0
DYD3_k127_548319_4 - K21029 - 2.7.7.80 0.0009364 50.0
DYD3_k127_548364_0 Transglutaminase/protease-like homologues - - - 0.00000000000001155 87.0
DYD3_k127_5496503_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 GO:0003674,GO:0003824,GO:0004018,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016829,GO:0016840,GO:0016842,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046033,GO:0046390,GO:0046483,GO:0055086,GO:0070626,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006257 440.0
DYD3_k127_5496503_1 PFAM aminotransferase class V - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 299.0
DYD3_k127_5496503_2 Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella K07325 - - 0.000000000000000000006586 102.0
DYD3_k127_5496503_3 deoxyhypusine monooxygenase activity K01387 - 3.4.24.3 0.0000000000008266 80.0
DYD3_k127_5498181_0 Pyridoxal-phosphate dependent enzyme K12339,K21148 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004124,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0019344,GO:0019752,GO:0019842,GO:0030170,GO:0032991,GO:0033847,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0080146,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.113,2.5.1.47 0.0000000000000000000000000000000000000000000000000000000003435 208.0
DYD3_k127_5502001_0 Glycosyl transferase family 2 K12992 - - 0.0000000000000000000003571 109.0
DYD3_k127_5502001_1 polysaccharide biosynthetic process - - - 0.000007569 57.0
DYD3_k127_5526103_0 PFAM NAD dependent epimerase dehydratase family K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000005707 217.0
DYD3_k127_5526103_1 ig-like, plexins, transcription factors - - - 0.000000000000000000000000000000000005937 160.0
DYD3_k127_5526103_2 - - - - 0.00000000000000004719 97.0
DYD3_k127_5526103_3 Sugar (and other) transporter - - - 0.000000254 63.0
DYD3_k127_5526103_4 MarC family integral membrane protein K05595 - - 0.0002773 52.0
DYD3_k127_5526103_5 Major facilitator superfamily - - - 0.0005841 49.0
DYD3_k127_5532570_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 GO:0003674,GO:0003824,GO:0003861,GO:0016829,GO:0016835,GO:0016836 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000001843 194.0
DYD3_k127_5532570_1 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.00000000000000000000000000000000000000003256 172.0
DYD3_k127_5532570_2 Aldo/keto reductase family - - - 0.000000000000000000000000000000000005142 153.0
DYD3_k127_5532570_3 transcriptional regulator containing an HTH domain fused to a Zn-ribbon K07743 - - 0.0000000000005573 74.0
DYD3_k127_5551489_1 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.00000000000000000000000000000000000000000008983 169.0
DYD3_k127_5551489_2 HD domain K07023 - - 0.0000000000000000000165 101.0
DYD3_k127_5551489_3 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.0000000000000000849 89.0
DYD3_k127_5560062_0 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 GO:0000049,GO:0000166,GO:0002949,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006450,GO:0006725,GO:0006807,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034470,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0065007,GO:0065008,GO:0070525,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363 2.7.7.87 0.0000000000000000000000371 104.0
DYD3_k127_5560062_1 repeat protein - - - 0.00000000004025 76.0
DYD3_k127_5564655_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001386 341.0
DYD3_k127_5564655_1 protein conserved in archaea - - - 0.0000000000000000000001457 100.0
DYD3_k127_5570666_0 Belongs to the peptidase S8 family - - - 0.00000000000000000005725 92.0
DYD3_k127_5570666_1 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000002184 83.0
DYD3_k127_5570666_3 - - - - 0.000000000007023 66.0
DYD3_k127_5572694_0 TIGRFAM SUF system FeS cluster assembly, SufB K07033,K09014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004455 376.0
DYD3_k127_5572694_1 FG-GAP repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006476 344.0
DYD3_k127_5572694_2 Conserved hypothetical protein (DUF2461) - - - 0.000000000000000000000000000000000000000001539 166.0
DYD3_k127_5572694_3 Glycosyl hydrolases family 15 K07190 - - 0.0000000000000000000000000000000000007996 145.0
DYD3_k127_5572694_4 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.000000000000001553 83.0
DYD3_k127_5572694_5 Zinc metalloprotease (Elastase) - - - 0.000009385 59.0
DYD3_k127_5583632_0 Possesses two activities a DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3'- to 5'-direction. Has a template-primer preference which is characteristic of a replicative DNA polymerase K02322 GO:0003674,GO:0005488,GO:0005515,GO:0042802 2.7.7.7 0.0 1071.0
DYD3_k127_5583632_1 Pfam:Pyridox_oxidase - - - 0.000000000000000000000000000000000000000000000000000000000008197 213.0
DYD3_k127_5583632_2 ATP-dependent protease La (LON) substrate-binding domain K01338,K07157 - 3.4.21.53 0.00000000000000000006085 102.0
DYD3_k127_5584895_0 COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005301 424.0
DYD3_k127_5584895_1 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.000000000000000000000000000000000000000000000000000000001101 205.0
DYD3_k127_5584895_2 Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate K01497 - 3.5.4.25 0.000000000000000000000000000000000000000000000000000001084 215.0
DYD3_k127_5584895_3 Multifunctional RNA-binding protein that recognizes the K-turn motif in ribosomal RNA, the RNA component of RNase P, box H ACA, box C D and box C' D' sRNAs K02936 GO:0000470,GO:0000966,GO:0001682,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004526,GO:0004540,GO:0004549,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034471,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0099116,GO:0140098,GO:0140101,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000003556 160.0
DYD3_k127_5584895_4 Belongs to the eukaryotic ribosomal protein eS28 family K02979 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990904 - 0.00000000000000000000000000008888 116.0
DYD3_k127_5584895_5 binds to the 23S rRNA K02896 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1902626,GO:1990904 - 0.0000000000000000008201 88.0
DYD3_k127_5584895_6 tyrosine recombinase XerC K04763 - - 0.0000002969 55.0
DYD3_k127_5584895_7 Ectodermal ciliogenesis protein - - - 0.00000362 54.0
DYD3_k127_5588840_0 C-terminus of AA_permease K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004617 387.0
DYD3_k127_5588840_1 - - - - 0.000000000000000000312 102.0
DYD3_k127_5588840_2 Belongs to the UPF0248 family K09715 - - 0.000000000002317 70.0
DYD3_k127_5591671_0 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346,K14161 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002065 280.0
DYD3_k127_5591671_1 Methyltransferase domain - - - 0.000002937 57.0
DYD3_k127_5595216_0 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002069 387.0
DYD3_k127_5595216_1 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002875 252.0
DYD3_k127_5595216_2 - - - - 0.00000000003965 73.0
DYD3_k127_5595495_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 9.997e-221 717.0
DYD3_k127_5595495_1 PrcB C-terminal - - - 0.0000007219 55.0
DYD3_k127_5601435_0 Serine/Threonine protein kinases, catalytic domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000001417 162.0
DYD3_k127_5601435_2 Protein of unknown function (DUF2662) - - - 0.00002779 55.0
DYD3_k127_5617332_0 Lanthionine synthetase C-like protein - - - 0.00000000000000000000000000001107 134.0
DYD3_k127_5617332_1 Lanthionine synthetase C family protein - - - 0.0000000000000000000005589 109.0
DYD3_k127_5617332_2 Phosphotransferase enzyme family - - - 0.000000000000001148 89.0
DYD3_k127_5621001_0 Ribosomal protein S8e K02995 GO:0000462,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042274,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044237,GO:0044238,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360,GO:1990904 - 0.0000000000000000000000000000000000367 138.0
DYD3_k127_5621001_1 - - - - 0.00000000000000000000000000002886 123.0
DYD3_k127_5621001_2 HELICc2 K03722,K10844 - 3.6.4.12 0.000000000000005867 80.0
DYD3_k127_5621001_3 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds directly to 7S RNA and mediates binding of the 54 kDa subunit of the SRP K03105 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0006605,GO:0006612,GO:0006613,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008312,GO:0015031,GO:0015833,GO:0033036,GO:0034613,GO:0042886,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0070727,GO:0071702,GO:0071705,GO:0072657,GO:0090150,GO:0097159,GO:1901363 - 0.00000000000004452 81.0
DYD3_k127_5640935_0 membrane protein, required for N-linked glycosylation K07151 GO:0003674,GO:0003824,GO:0008150,GO:0009987,GO:0016043,GO:0016740,GO:0016757,GO:0045229,GO:0045232,GO:0071840 2.4.99.18 0.000000000000000000000000000000000000000000000000000000000000006302 241.0
DYD3_k127_5681799_0 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.000005 58.0
DYD3_k127_5681799_1 Serine threonine protein kinase - - - 0.00001933 57.0
DYD3_k127_5691367_0 PAS domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002524 566.0
DYD3_k127_5691367_1 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000002201 265.0
DYD3_k127_5691367_2 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000000004615 228.0
DYD3_k127_5691367_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000005651 136.0
DYD3_k127_5694662_0 Transporter associated domain - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000002655 122.0
DYD3_k127_5694662_1 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000003431 123.0
DYD3_k127_5694662_2 PFAM PKD domain containing protein - - - 0.000000000000000000000000003578 125.0
DYD3_k127_5694662_3 acetyltransferase - - - 0.000001165 58.0
DYD3_k127_5696669_0 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114 1.2.1.41 0.0000000000000000000000000000000000000000001889 177.0
DYD3_k127_5696669_1 Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2- acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway K03525 - 2.7.1.33 0.000000000000000000000000000000000000000153 173.0
DYD3_k127_5696669_2 exo-alpha-(2->6)-sialidase activity - - - 0.000000000004898 78.0
DYD3_k127_5704016_0 Belongs to the ALAD family K01698 - 4.2.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 359.0
DYD3_k127_5704016_1 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.0000000000000000000000000000000000000000000000000000000000000002725 234.0
DYD3_k127_5704016_2 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.00000000000000000000000000000000000000000000000008078 197.0
DYD3_k127_5704016_3 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.00000000000000000000000000202 128.0
DYD3_k127_5718564_0 ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001957 380.0
DYD3_k127_5718564_1 Threonine dehydratase K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000004611 241.0
DYD3_k127_5718564_2 Ion transport K10716 - - 0.0000000002501 68.0
DYD3_k127_5721975_0 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K13832 - 1.1.1.25,4.2.1.10 0.0000000000000000000000000000000000000000000000000323 199.0
DYD3_k127_5721975_1 shikimate kinase activity K00891 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004413,GO:0006082,GO:0006520,GO:0006555,GO:0006566,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009088,GO:0009092,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.1.71 0.0000000000000000000000000000000002934 151.0
DYD3_k127_5721975_2 Belongs to the archaeal-type DHQ synthase family K11646 - 1.4.1.24 0.00000000000000017 80.0
DYD3_k127_5744748_0 Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000357 199.0
DYD3_k127_5744748_1 homolog of PrgY (pheromone shutdown protein) - - - 0.00000000000000000000000000007798 135.0
DYD3_k127_5744748_2 PFAM filamentation induced by cAMP protein Fic - - - 0.0000000000000000004525 98.0
DYD3_k127_5744748_3 COG0346 Lactoylglutathione lyase and related lyases K01759 - 4.4.1.5 0.000000000000000001195 94.0
DYD3_k127_5744748_4 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.000001044 61.0
DYD3_k127_5761048_0 Belongs to the metallo-dependent hydrolases superfamily. HutI family K01468 - 3.5.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004747 417.0
DYD3_k127_5761048_1 Belongs to the arginase family K01479,K01480 - 3.5.3.11,3.5.3.8 0.0000000000000000000000000000000000000000003472 168.0
DYD3_k127_5761048_2 flavin-nucleotide-binding protein K07005 - - 0.0000006633 59.0
DYD3_k127_5774644_0 Calcineurin-like phosphoesterase superfamily domain K06953 - - 0.000000000000000000000000000000000000000000000000000003676 202.0
DYD3_k127_5774644_1 membrane - - - 0.000006637 57.0
DYD3_k127_5783638_0 Met-10+ like-protein K15429 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000000003887 235.0
DYD3_k127_5783638_1 PFAM Polysaccharide deacetylase - - - 0.0000000000000000003631 98.0
DYD3_k127_5783638_2 Concanavalin A-like lectin/glucanases superfamily - - - 0.0005371 47.0
DYD3_k127_5829820_0 LVIVD repeat - - - 0.0000006078 62.0
DYD3_k127_5829820_1 PFAM Thioredoxin domain - - - 0.0004016 49.0
DYD3_k127_5846310_0 UDP-N-acetylglucosamine 2-epimerase K01791 - 5.1.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 467.0
DYD3_k127_5846310_1 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000008327 236.0
DYD3_k127_5846310_2 involved in cell wall biogenesis K00721 - 2.4.1.83 0.0000000000000000000000000000000000000000000000001094 192.0
DYD3_k127_5846310_3 dehydrogenases and related proteins - - - 0.000000000000000000000000001184 127.0
DYD3_k127_5846310_4 Glycosyltransferase family 87 - - - 0.00000000000000000002597 107.0
DYD3_k127_5846310_5 PFAM ABC transporter K15738 - - 0.000000000000000007766 96.0
DYD3_k127_5846310_6 - - - - 0.000000176 63.0
DYD3_k127_5871474_0 Specifically catalyzes the N1-methylation of pseudouridine at position 54 (Psi54) in tRNAs K16317 - 2.1.1.257 0.0000000000000000282 84.0
DYD3_k127_5871474_1 Thioredoxin - - - 0.00000000000001157 83.0
DYD3_k127_5872815_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K03234 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003824 348.0
DYD3_k127_5872815_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003619 306.0
DYD3_k127_5872815_2 - - - - 0.00000000000000000000000000000000001989 147.0
DYD3_k127_5873331_0 Coproporphyrinogen III oxidase K00228 - 1.3.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000005639 259.0
DYD3_k127_5873331_1 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599,K14080 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.246,4.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000005371 227.0
DYD3_k127_5873331_2 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.00000000000000000005184 94.0
DYD3_k127_5873688_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123,K05299 - 1.17.1.10,1.17.1.9 1.057e-199 663.0
DYD3_k127_5873688_1 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor domain - - - 0.0000000000000000000000000000000000000000000000002107 199.0
DYD3_k127_5897057_0 polyketide synthase K04786 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003645 476.0
DYD3_k127_5904753_0 COG3425 3-hydroxy-3-methylglutaryl CoA synthase K01641,K07068 - 2.3.3.10 0.00000000000000000000000001138 123.0
DYD3_k127_5904753_1 COG0183 Acetyl-CoA acetyltransferase K00626,K00632 - 2.3.1.16,2.3.1.9 0.0000000000000000000001428 98.0
DYD3_k127_5904753_2 - - - - 0.000000000000005687 84.0
DYD3_k127_5911625_0 Major facilitator superfamily K05820 - - 0.000007749 58.0
DYD3_k127_591923_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit K02118 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002213 419.0
DYD3_k127_591923_1 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.00000000000000005506 85.0
DYD3_k127_591923_2 Putative antitoxin - - - 0.00001529 52.0
DYD3_k127_5920162_0 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase - - - 0.00000000000000000000000000000000001077 145.0
DYD3_k127_5920264_0 Oxidoreductase molybdopterin binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003121 271.0
DYD3_k127_5920264_1 Cysteine dioxygenase type I K00456 - 1.13.11.20 0.00000000000000002143 90.0
DYD3_k127_5933520_0 Dimethylates a single guanine residue at position 26 of a number of tRNAs using S-adenosyl-L-methionine as donor of the methyl groups K00555 GO:0001510,GO:0002940,GO:0003674,GO:0003824,GO:0004809,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.215,2.1.1.216 0.00000000000000000000000000000000000000000000000000000000000000000001641 248.0
DYD3_k127_5959525_0 Xylose isomerase-like TIM barrel K01151 - 3.1.21.2 0.0000000000000000000000000000000000000000000000000000000005204 218.0
DYD3_k127_5959525_1 PFAM Sugar isomerase (SIS) K08094 - 5.3.1.27 0.0000000000000000000000000003528 128.0
DYD3_k127_5962422_0 F-box associated region - - - 0.000000000000000000000000000001485 141.0
DYD3_k127_5971299_0 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002193 365.0
DYD3_k127_5971299_1 Belongs to the universal ribosomal protein uS2 family K02967 GO:0000028,GO:0000447,GO:0000460,GO:0000461,GO:0000462,GO:0000466,GO:0000469,GO:0000478,GO:0000479,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0031123,GO:0031125,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043628,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002648 266.0
DYD3_k127_5971299_2 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03055 - 2.7.7.6 0.00000000001156 76.0
DYD3_k127_5971299_3 Belongs to the DEAD box helicase family - - - 0.000023 51.0
DYD3_k127_5971829_0 SWI SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 K14440 GO:0000018,GO:0000228,GO:0000733,GO:0003674,GO:0003676,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005657,GO:0005694,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006275,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008150,GO:0008152,GO:0008156,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010556,GO:0010558,GO:0010605,GO:0016043,GO:0016462,GO:0016787,GO:0016788,GO:0016817,GO:0016818,GO:0017111,GO:0019219,GO:0019222,GO:0031297,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031593,GO:0031974,GO:0031981,GO:0032392,GO:0033554,GO:0034641,GO:0034645,GO:0036292,GO:0036310,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043596,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0045005,GO:0045910,GO:0045934,GO:0046483,GO:0048478,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051276,GO:0051716,GO:0060255,GO:0065007,GO:0070013,GO:0070530,GO:0071103,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0090329,GO:0097159,GO:0097617,GO:0140030,GO:0140097,GO:1901360,GO:1901363,GO:1901576,GO:2000104,GO:2000112,GO:2000113 3.6.4.12 0.000004383 61.0
DYD3_k127_5971829_1 Putative PD-(D/E)XK phosphodiesterase (DUF2161) - - - 0.0002573 53.0
DYD3_k127_5984207_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008336 595.0
DYD3_k127_5984207_1 PAS fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 409.0
DYD3_k127_5984207_2 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000003105 264.0
DYD3_k127_5984207_3 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000005681 254.0
DYD3_k127_5984207_4 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K03431 - 5.4.2.10 0.00000000000000000000000000000000000000000000004965 176.0
DYD3_k127_5984207_5 PFAM Dual specificity protein phosphatase - - - 0.00001698 58.0
DYD3_k127_5992742_0 PFAM aminotransferase class V - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004012 409.0
DYD3_k127_5992742_1 Nucleolar GTP-binding protein 1 (NOG1) K06943 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001385 284.0
DYD3_k127_5992742_2 Dehydrogenase reductase sdr K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000123 254.0
DYD3_k127_5992742_3 Specifically catalyzes the AdoMet-dependent 2'-O-ribose methylation of cytidine at position 56 in tRNAs K07254 GO:0001510,GO:0002128,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.206 0.00000000000000000000000000000000000000000000000000000008944 201.0
DYD3_k127_5992742_4 Catalyzes the CTP-dependent phosphorylation of riboflavin (vitamin B2) to form flavin mononucleotide (FMN) K07732 - 2.7.1.161 0.0000000000000000000000000000000000000000000000000000014 202.0
DYD3_k127_5992742_5 ArsR transcriptional regulator - - - 0.0000000000000000000000000000000002078 137.0
DYD3_k127_5992742_6 methyltransferase activity - - - 0.0000000000000000000000000001055 121.0
DYD3_k127_5992742_7 PFAM blue (type 1) copper domain protein - - - 0.0004248 49.0
DYD3_k127_5993432_0 COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases K01895 - 6.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001887 362.0
DYD3_k127_6010293_0 von willebrand factor, type A K12549 - - 0.000004402 61.0
DYD3_k127_6014238_0 Phosphopantetheine attachment site - - - 0.0 1675.0
DYD3_k127_6024609_0 Na+/Pi-cotransporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005008 298.0
DYD3_k127_6024609_1 PFAM UspA domain protein - - - 0.000000000000000000004485 103.0
DYD3_k127_6039555_0 COG0788 Formyltetrahydrofolate hydrolase K01433 - 3.5.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000598 258.0
DYD3_k127_6039555_1 Methyltransferase involved in ribosomal biogenesis. Specifically catalyzes the N1-methylation of the pseudouridine corresponding to position 914 in M.jannaschii 16S rRNA K14568 GO:0000154,GO:0000462,GO:0001510,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0019843,GO:0022613,GO:0030490,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042274,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070037,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0140098,GO:0140102,GO:1901360,GO:1901363 2.1.1.260 0.0000000000000000000000000000000000001453 154.0
DYD3_k127_6039555_2 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases K03184,K18800 GO:0003674,GO:0003824,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016491,GO:0019168,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:1901576,GO:1901661,GO:1901663 - 0.0000000006067 65.0
DYD3_k127_6039555_3 Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha- keto acid in the first half-reaction K00824 - 2.6.1.21 0.000000003202 60.0
DYD3_k127_6040116_0 beta-lactamase domain protein K02238 - - 0.000000000000000000000000000000000000004657 162.0
DYD3_k127_6040116_1 ig-like, plexins, transcription factors - - - 0.0001584 54.0
DYD3_k127_6046564_0 radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000138 299.0
DYD3_k127_6046564_1 ATP-grasp domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004714 278.0
DYD3_k127_6046564_2 Orn DAP Arg decarboxylase K01586 - 4.1.1.20 0.000000000000000000000000001152 125.0
DYD3_k127_6047_0 serine threonine protein kinase K07178 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000001737 220.0
DYD3_k127_6047_1 KH domain protein K06961 - - 0.000000000000000000000000000000000000000000000003328 178.0
DYD3_k127_6047_2 Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits K03236 - - 0.00000000000000000000000000000000000002714 151.0
DYD3_k127_6051880_0 Uncharacterised protein family UPF0066 - - - 0.000000000000000000000000000001705 126.0
DYD3_k127_6051880_1 Bacterial regulatory helix-turn-helix protein, lysR family K03574 - 3.6.1.55 0.00000007006 64.0
DYD3_k127_6054180_0 4Fe-4S single cluster domain K07129 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000013 276.0
DYD3_k127_6058196_0 helix_turn_helix ASNC type - - - 0.00000001642 64.0
DYD3_k127_6068056_0 NAD dependent epimerase/dehydratase family - - - 0.000000000000000000000000000000000000000000000000000000000001123 220.0
DYD3_k127_6068056_1 Metal-dependent hydrolase - - - 0.000000000000000000000000000000000000000000000000000001841 203.0
DYD3_k127_6068056_2 ATP-NAD AcoX kinase K00858 - 2.7.1.23 0.0000000000001234 73.0
DYD3_k127_6068056_3 Archaeal transcriptional regulator TrmB - - - 0.000002018 52.0
DYD3_k127_6069561_0 Major facilitator superfamily - - - 1.594e-198 640.0
DYD3_k127_6069561_1 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000006346 235.0
DYD3_k127_6069561_2 Activator of Hsp90 ATPase 1 family protein - - - 0.00000000000000000000000000000000000001189 155.0
DYD3_k127_6069561_3 transcriptional - - - 0.00000000000000000000000000000000000002809 145.0
DYD3_k127_6069561_4 Uncharacterized conserved protein (DUF2277) - - - 0.00000000000000000000000004409 109.0
DYD3_k127_6099701_0 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000004811 157.0
DYD3_k127_6114133_0 ATPase family associated with various cellular activities (AAA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003777 419.0
DYD3_k127_6114133_1 Domain of unknown function (DUF4157) - - - 0.00000000000000000000002237 114.0
DYD3_k127_6115345_0 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.000000000000000000000000000000000000000000002597 172.0
DYD3_k127_6115345_1 Methyltransferase type 11 - - - 0.000000000000000000000000000000004896 139.0
DYD3_k127_6115690_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00260,K00261,K00262 - 1.4.1.2,1.4.1.3,1.4.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003132 397.0
DYD3_k127_6115690_1 NADH ubiquinone oxidoreductase subunit 2 (Chain N) K00343,K22169 - 1.5.98.3,1.6.5.3 0.00000000000000000000000000000000000000000000000000001276 197.0
DYD3_k127_6115690_2 Sodium/hydrogen exchanger family K03455 - - 0.0000000000000000000000000000000000000000000002492 190.0
DYD3_k127_6115690_3 Cupin 2 conserved barrel domain protein - - - 0.00000000000000000000000000000000000000005207 160.0
DYD3_k127_6115690_4 KaiC K08482 - - 0.00002316 57.0
DYD3_k127_6142523_0 Elongator protein 3, MiaB family, Radical SAM K06936 - - 0.000000000000000000000000000000000000000000000000000000000000000000004115 248.0
DYD3_k127_6142523_1 Catalyzes the phosphorylation of (R)-mevalonate (MVA) to (R)-mevalonate 5-phosphate (MVAP). Functions in the mevalonate (MVA) pathway leading to isopentenyl diphosphate (IPP), a key precursor for the biosynthesis of isoprenoid compounds such as archaeal membrane lipids K00869 GO:0003674,GO:0003824,GO:0004496,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006084,GO:0006139,GO:0006163,GO:0006629,GO:0006637,GO:0006644,GO:0006720,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008202,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009150,GO:0009240,GO:0009259,GO:0009987,GO:0016125,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019287,GO:0019637,GO:0019693,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0035383,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046490,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901135,GO:1901360,GO:1901564,GO:1901576,GO:1901615 2.7.1.36 0.00000000000005771 79.0
DYD3_k127_6142523_2 PUA domain containing protein K07557 - 2.6.1.97 0.000000000001142 75.0
DYD3_k127_6146619_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02474,K13015 - 1.1.1.136 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002532 294.0
DYD3_k127_6146619_1 Glycosyl transferase family 2 - - - 0.000000000000000000000000000004973 131.0
DYD3_k127_6151067_0 Acetyltransferase (GNAT) domain K03789 - 2.3.1.128 0.0000000000000000000000002816 115.0
DYD3_k127_6151067_1 phosphoserine phosphatase SerB K01079 - 3.1.3.3 0.0000000000000004317 79.0
DYD3_k127_6151067_2 Belongs to the UPF0146 family K09713 - - 0.000000001707 64.0
DYD3_k127_6156019_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 424.0
DYD3_k127_6156019_1 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006852 314.0
DYD3_k127_6156019_2 Domain of unknown function (DUF1610) K07580 - - 0.000000000004399 79.0
DYD3_k127_6156019_3 exo-alpha-(2->6)-sialidase activity - - - 0.00000000004269 76.0
DYD3_k127_6156019_4 Promotes the exchange of GDP for GTP in EF-1-alpha GDP, thus allowing the regeneration of EF-1-alpha GTP that could then be used to form the ternary complex EF-1-alpha GTP AAtRNA K03232 - - 0.000000002714 66.0
DYD3_k127_6156019_5 - - - - 0.0004591 45.0
DYD3_k127_6169672_0 protein conserved in archaea - - - 0.0000000003683 73.0
DYD3_k127_6169967_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007462 326.0
DYD3_k127_6169967_1 Dyp-type peroxidase family - - - 0.0000000000000000000000000000000001711 152.0
DYD3_k127_6196126_0 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 0.0000000000000000000000000000000000000000000005619 168.0
DYD3_k127_6196126_1 Serine/Threonine protein kinases, catalytic domain K12132 - 2.7.11.1 0.00000000000000000000000000000004492 144.0
DYD3_k127_6196126_2 PFAM FKBP-type peptidyl-prolyl cis-trans isomerase K01802 - 5.2.1.8 0.0003178 53.0
DYD3_k127_621829_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate K03330 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008519 458.0
DYD3_k127_621829_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate K09482 - 6.3.5.7 0.00000000000000226 78.0
DYD3_k127_6224981_0 protein conserved in archaea - - - 0.000000001958 68.0
DYD3_k127_6224981_1 Domain of unknown function (DUF4399) - - - 0.00002729 53.0
DYD3_k127_6224981_2 Heparinase II/III-like protein - - - 0.0001278 45.0
DYD3_k127_623454_0 Transcriptional regulator - - - 0.00000000000000000000000000000000000007327 149.0
DYD3_k127_6237927_0 domain, Protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004332 404.0
DYD3_k127_6237927_1 Exonuclease of the beta-lactamase fold involved in RNA processing K07577 - - 0.000000000000000000000000000000000000000000000000000000000000003186 233.0
DYD3_k127_6237927_2 DNA ligase K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.0000001064 63.0
DYD3_k127_6249313_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit K02118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003843 299.0
DYD3_k127_6249313_1 Acyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000004274 253.0
DYD3_k127_6249313_2 Peptidase S8 and S53 subtilisin kexin sedolisin K01342,K14645 - 3.4.21.62 0.00000000000000000000000000000000000000000000000001065 204.0
DYD3_k127_6249313_3 IgGFc binding protein - - - 0.00000000000000000002314 108.0
DYD3_k127_6249313_4 PFAM Hemolysin-type calcium-binding repeat (2 copies) - - - 0.000000000000002014 91.0
DYD3_k127_6249313_5 nucleotidyltransferase activity K07075 - - 0.000002715 56.0
DYD3_k127_6249313_6 protein conserved in archaea - - - 0.00001091 57.0
DYD3_k127_6249313_7 PFAM Conserved Archaeal protein (DUF2204) - - - 0.00007543 51.0
DYD3_k127_6250240_0 Phosphate transporter family K03306 - - 0.00000000000000000000000000000000002647 144.0
DYD3_k127_6250240_1 Fumarate reductase succinate dehydrogenase flavoprotein K00278 - 1.4.3.16 0.00000004696 64.0
DYD3_k127_6250240_2 Phosphate transporter family K03306 GO:0003674,GO:0005215,GO:0005315,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006817,GO:0006820,GO:0008150,GO:0015291,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0035435,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661 - 0.000008758 48.0
DYD3_k127_6272298_0 Belongs to the UPF0216 family K09737 - - 0.0000000000000004799 85.0
DYD3_k127_6272298_1 C2C2 Zinc finger K03057 - - 0.00000000000004112 78.0
DYD3_k127_6272298_2 Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella K07325 GO:0005575,GO:0005623,GO:0009288,GO:0042995,GO:0043226,GO:0043228,GO:0044464 - 0.00000002097 57.0
DYD3_k127_6282881_0 Pro-kumamolisin, activation domain - - - 0.0000000001232 76.0
DYD3_k127_6288272_0 MMPL family K07003 - - 0.000000000008627 79.0
DYD3_k127_6315960_0 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002605 330.0
DYD3_k127_6315960_1 PFAM CBS domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000009201 218.0
DYD3_k127_6315960_2 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000003054 218.0
DYD3_k127_6315960_3 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 GO:0003674,GO:0003824,GO:0004644,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0016740,GO:0016741,GO:0016742,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716 2.1.2.2 0.0000000000000000000000000000000000000000000000000003145 192.0
DYD3_k127_6315960_4 PFAM Uncharacterised ACR, YagE family COG1723 - - - 0.0000000000000000000000000000000000000000000601 175.0
DYD3_k127_6315960_5 Belongs to the CinA family K03743 - 3.5.1.42 0.000000000000000000000000000000001183 138.0
DYD3_k127_6315960_6 PFAM nitrogen-fixing NifU domain protein - - - 0.00000000000001293 84.0
DYD3_k127_6315960_7 Antibiotic biosynthesis monooxygenase - - - 0.00000002091 59.0
DYD3_k127_6316449_0 PRC-barrel domain - - - 0.0000000000000003735 81.0
DYD3_k127_6316449_1 Transcriptional regulator - - - 0.0000000000002914 76.0
DYD3_k127_6316582_0 Thioesterase superfamily - - - 0.0000000000000000000000001772 111.0
DYD3_k127_6316582_1 DHHA1 domain K07463 - - 0.000000003003 67.0
DYD3_k127_6316582_2 Ca-dependent carbohydrate-binding module xylan-binding - - - 0.00001745 50.0
DYD3_k127_6322836_0 domain, Protein - - - 0.0000009138 61.0
DYD3_k127_6322836_1 ABC transporter K06147,K18893 - - 0.0001317 54.0
DYD3_k127_63349_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 2.468e-210 674.0
DYD3_k127_6338579_0 PFAM type II secretion system protein E K07332 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000205 557.0
DYD3_k127_6338579_1 Type II secretion system (T2SS), protein F K07333 - - 0.00000000000000000000000000000000000000000000000001833 190.0
DYD3_k127_6338579_2 Type II secretion system (T2SS), protein F K07333 - - 0.0000000000000000000000000000000000000000000000004224 200.0
DYD3_k127_6340782_0 Catalyzes the conversion of 3'-phosphate to a 2',3'- cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps (A) adenylation of the enzyme by ATP K01974 - 6.5.1.4 0.00000000000000000000000000000000000000000000000000002377 214.0
DYD3_k127_6340782_1 Glycosyl transferase 4-like - - - 0.00000000000000000000000000000000000000000000006048 193.0
DYD3_k127_6340782_2 Polysaccharide biosynthesis protein - - - 0.000000000006188 79.0
DYD3_k127_6365399_0 aminopeptidase activity K19689 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003851 269.0
DYD3_k127_6365399_1 DJ-1/PfpI family - - - 0.0003083 51.0
DYD3_k127_6383285_0 DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004125 611.0
DYD3_k127_6383285_1 Involved in septum formation K06287 GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0005575,GO:0005623,GO:0007049,GO:0008150,GO:0009987,GO:0016043,GO:0022402,GO:0022607,GO:0030428,GO:0032506,GO:0044085,GO:0044464,GO:0051301,GO:0061640,GO:0071840,GO:0090529,GO:1902410,GO:1903047 - 0.00000000000000000000000000000000000000003053 166.0
DYD3_k127_6383285_2 Acetyltransferase (GNAT) domain - - - 0.00000000000000000005819 98.0
DYD3_k127_6383285_3 membrane - - - 0.0000000000003552 81.0
DYD3_k127_6383285_4 - - - - 0.000004273 57.0
DYD3_k127_6385293_0 HupE / UreJ protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002315 289.0
DYD3_k127_6385293_1 - - - - 0.0000000000000000000001336 111.0
DYD3_k127_6385293_2 - - - - 0.0000000000000000002854 100.0
DYD3_k127_6385293_3 structural constituent of ribosome K02984 - - 0.0000000000002041 78.0
DYD3_k127_6407073_0 Transposase DDE domain K07492 - - 0.0000000000000000000000000000000000000000000001586 172.0
DYD3_k127_6407073_1 Zn_pept K05996 - 3.4.17.18 0.0000000000000000000000001283 122.0
DYD3_k127_6407073_2 Putative transposase of IS4/5 family (DUF4096) - - - 0.000000000002561 70.0
DYD3_k127_6417604_0 amino acid K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007772 387.0
DYD3_k127_6417604_1 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004646 359.0
DYD3_k127_6417604_2 transcription regulator activity - - - 0.000000000000000000000000000000000000000003699 159.0
DYD3_k127_6417604_3 Belongs to the thioredoxin family K03671 GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 - 0.000000000000000000000000000000001797 132.0
DYD3_k127_6423110_0 Glycosyltransferase Family 4 K00743 - 2.4.1.87 0.00000000000000000000000000000000000000000000000003051 193.0
DYD3_k127_6423110_1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058,K16843 - 1.1.1.310,1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000005803 181.0
DYD3_k127_6425122_0 Methyltransferase type 11 - - - 0.0000000000000000000000000000000000000000000000000008402 195.0
DYD3_k127_6434685_0 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000482 235.0
DYD3_k127_6434685_1 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.000000000000000000000000000000000000000000000000000003217 198.0
DYD3_k127_6434685_2 TIGRFAM Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.0000000000000000000000000000000000000000000000000002144 194.0
DYD3_k127_6434685_3 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.0000000000000000000000000000000000000000000002005 189.0
DYD3_k127_6434685_4 Imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.0000000000000000000000000000000000000000006797 163.0
DYD3_k127_6434685_5 Jacalin-like lectin domain - - - 0.0000005414 61.0
DYD3_k127_6435481_0 PFAM ABC transporter related K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003724 295.0
DYD3_k127_6435481_1 ig-like, plexins, transcription factors - - - 0.00000001025 65.0
DYD3_k127_6436588_0 Thiolase, N-terminal domain K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009362 388.0
DYD3_k127_6436588_1 ThiF family - - - 0.00000000000000000000000321 106.0
DYD3_k127_6436588_2 Rubredoxin-like zinc ribbon domain (DUF35_N) K07068 - - 0.00005496 50.0
DYD3_k127_6441321_0 Photosynthesis system II assembly factor YCF48 - - - 0.0000186 59.0
DYD3_k127_6448485_0 Arginosuccinate synthase K01940 - 6.3.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 417.0
DYD3_k127_6448485_1 PFAM Oxidoreductase, molybdopterin binding - - - 0.00000000000000000000000000000000000000000000000000000000000007205 242.0
DYD3_k127_6448485_2 Methyltransferase K07755 - 2.1.1.137 0.00000000000000000000000000000000000000000000001082 188.0
DYD3_k127_6448485_3 AAA domain - - - 0.00000000000000000000000000000000000000000001565 184.0
DYD3_k127_6448485_4 - - - - 0.0000000000000000000000000000000000534 149.0
DYD3_k127_6448485_5 Low molecular weight phosphatase family K03741 - 1.20.4.1 0.000000000000000000000000000000009558 133.0
DYD3_k127_6448485_6 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567 - 2.1.1.63 0.0000000000000000000000000005284 121.0
DYD3_k127_6448485_7 Anion-transporting ATPase - GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944 - 0.000000000000000000000000003567 123.0
DYD3_k127_6448485_8 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.000000000001204 75.0
DYD3_k127_6448485_9 protein related to plant photosystem II stability assembly factor - - - 0.000000193 63.0
DYD3_k127_6450250_0 Multicopper oxidase K22349 - 1.16.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001581 312.0
DYD3_k127_6457745_0 ABC transporter K01990,K09695 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004004 428.0
DYD3_k127_6457745_1 transport, permease protein K01992,K18233 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003284 381.0
DYD3_k127_6457745_2 Major facilitator superfamily - - - 0.000000000000000000000000000000000000006939 149.0
DYD3_k127_6457745_3 Transcriptional regulator - - - 0.0000000000000000004658 97.0
DYD3_k127_6457745_4 PFAM blue (type 1) copper domain protein - - - 0.00000001796 60.0
DYD3_k127_6457745_5 BNR repeat-like domain - - - 0.0000008101 61.0
DYD3_k127_6460821_0 DEAD DEAH box helicase domain protein K10896 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004613 354.0
DYD3_k127_6460821_1 NADPH-dependent FMN reductase - - - 0.0000000000000000000000000002007 128.0
DYD3_k127_6460821_2 GIY-YIG catalytic domain K07461 - - 0.000000000000000000005244 102.0
DYD3_k127_646328_0 - - - - 0.00000000000001112 80.0
DYD3_k127_646328_1 protein conserved in archaea - - - 0.0007219 50.0
DYD3_k127_6483662_0 archaeal coiled-coil protein - - - 0.00000000000000000000000000000000291 145.0
DYD3_k127_6484866_0 COG0531 Amino acid transporters - - - 0.000000000000000002506 91.0
DYD3_k127_6488153_0 Serine/Threonine protein kinases, catalytic domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000981 169.0
DYD3_k127_6488153_1 PFAM Forkhead-associated protein - - - 0.00000599 56.0
DYD3_k127_6494267_0 Binding-protein-dependent transport system inner membrane component K02063 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003631 267.0
DYD3_k127_6494267_1 Belongs to the ABC transporter superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006621 258.0
DYD3_k127_650355_0 D-arabinono-1,4-lactone oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000776 444.0
DYD3_k127_650355_1 Serine aminopeptidase, S33 K10222 - 3.7.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004761 289.0
DYD3_k127_650355_10 NikR C terminal nickel binding domain K07722 - - 0.00000000000001018 81.0
DYD3_k127_650355_11 Protein of unknown function (DUF1328) - - - 0.000000005892 62.0
DYD3_k127_650355_2 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000001455 237.0
DYD3_k127_650355_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000001523 233.0
DYD3_k127_650355_4 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000007774 228.0
DYD3_k127_650355_5 Major Facilitator Superfamily - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000002183 202.0
DYD3_k127_650355_6 Belongs to the bacterial solute-binding protein 9 family K09815,K09818 - - 0.0000000000000000000000000000000000000000000000000000001168 205.0
DYD3_k127_650355_7 ABC 3 transport family K09816 - - 0.000000000000000000000000000000000000000000000000001451 203.0
DYD3_k127_650355_8 PFAM ABC transporter related K09817 - - 0.00000000000000000000000000000000000000000000005641 188.0
DYD3_k127_650355_9 - - - - 0.0000000000000000000000000000000001756 145.0
DYD3_k127_6510595_0 Catalyzes the transfer of the amino group of L-glutamate to LysW -aminoadipate 6-semialdehyde, generating LysW -gamma-L- lysine K00821,K05830 - 2.6.1.11,2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001754 392.0
DYD3_k127_6510595_1 Belongs to the acetylglutamate kinase family. LysZ subfamily K05828 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002644 307.0
DYD3_k127_6510595_2 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.000000000002579 67.0
DYD3_k127_6510595_3 SIR2-like domain - - - 0.0000000001371 74.0
DYD3_k127_6511227_0 ABC transporter K06158 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005854 335.0
DYD3_k127_6548320_0 D-alanine [D-alanyl carrier protein] ligase activity K16428,K16429 - - 0.00002578 56.0
DYD3_k127_6561092_0 acyl-CoA dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 311.0
DYD3_k127_6561092_1 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.0000000000000000000000000000000008515 150.0
DYD3_k127_6568798_0 PFAM Chemotaxis methyl-accepting receptor, signalling K03406 - - 0.00000000000000000000000000000000000000000000000001746 198.0
DYD3_k127_6568798_1 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000361 199.0
DYD3_k127_6568798_2 cheY-homologous receiver domain - - - 0.000000000000000000000000000006105 129.0
DYD3_k127_6568798_3 chemotaxis protein K03408 - - 0.00000000000000507 84.0
DYD3_k127_6568798_4 Histidine Phosphotransfer domain K03407 - 2.7.13.3 0.000000000000258 83.0
DYD3_k127_6575766_0 Isocitrate lyase K01637 - 4.1.3.1 1.312e-209 666.0
DYD3_k127_6575766_1 Belongs to the malate synthase family K01638 - 2.3.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005663 483.0
DYD3_k127_6576835_0 Trehalose utilisation - - - 0.0000002469 65.0
DYD3_k127_6588969_0 ABC-type antimicrobial peptide transport system, ATPase component K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000005698 249.0
DYD3_k127_6588969_1 MacB-like periplasmic core domain K02004 - - 0.0000000000000000005753 96.0
DYD3_k127_6606403_0 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K18285 - 2.5.1.120 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006385 337.0
DYD3_k127_6606403_1 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11784 - 1.21.98.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001498 345.0
DYD3_k127_6606403_2 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.000000000000000000000000000000000000000000000000001626 196.0
DYD3_k127_6606403_3 Peptidase family M28 K19701 - 3.4.11.10,3.4.11.6 0.000000000000194 82.0
DYD3_k127_6606403_4 TfoX N-terminal domain K07343 - - 0.0004775 50.0
DYD3_k127_6641145_0 ATPases associated with a variety of cellular activities K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004717 297.0
DYD3_k127_6641145_1 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000002602 155.0
DYD3_k127_6642548_0 TIGRFAM acetyl coenzyme A synthetase (ADP forming), alpha domain K01905,K22224 - 6.2.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005401 559.0
DYD3_k127_6642548_1 flavin-nucleotide-binding protein K07005 - - 0.00000000002154 70.0
DYD3_k127_665224_0 Binding-protein-dependent transport system inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000009932 256.0
DYD3_k127_665224_1 N-terminal TM domain of oligopeptide transport permease C K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000003277 252.0
DYD3_k127_665224_2 Belongs to the ABC transporter superfamily K02031,K02032,K15583 - - 0.000000000000000000000000000000000007769 142.0
DYD3_k127_6656216_0 FeS assembly protein SufB K07033,K09014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001492 404.0
DYD3_k127_6656216_1 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.00000000000000000000000000000000000000000002435 183.0
DYD3_k127_666630_0 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K01663,K02500 GO:0000105,GO:0000107,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009382,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0032991,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494,GO:1990234 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002433 324.0
DYD3_k127_666630_1 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K01739,K01761 - 2.5.1.48,4.4.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 329.0
DYD3_k127_666630_10 - - - - 0.00001321 49.0
DYD3_k127_666630_11 Protein of unknown function (DUF805) - - - 0.000582 52.0
DYD3_k127_666630_2 Involved in regulation of DNA replication K10725 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000106 287.0
DYD3_k127_666630_3 Peptidase family M50 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009602 274.0
DYD3_k127_666630_4 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496,K11755 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.5.4.19,3.6.1.31 0.00000000000000000000000000000000000000000000000002005 195.0
DYD3_k127_666630_5 Catalyzes the transfer of diphosphate from ATP to 6- hydroxymethyl-7,8-dihydropterin (6-HMD), leading to 6- hydroxymethyl-7,8-dihydropterin diphosphate (6-HMDP) K07142 - 2.7.6.3 0.0000000000000000000000000000000000000001038 158.0
DYD3_k127_666630_6 Protease prsW family - - - 0.00000000000000000001175 101.0
DYD3_k127_666630_7 Protein of unknown function (DUF1622) - - - 0.00000000009615 68.0
DYD3_k127_666630_8 DNA helicase K03658 - 3.6.4.12 0.000000128 60.0
DYD3_k127_666630_9 Transcriptional regulator, ArsR family - - - 0.0000009846 57.0
DYD3_k127_666676_0 Belongs to the peptidase M48B family K03799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001998 299.0
DYD3_k127_667940_0 COG1078 HD superfamily phosphohydrolases K06885 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009161 286.0
DYD3_k127_667940_1 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.00000000001134 72.0
DYD3_k127_6683752_0 sh3 domain protein K07282 - - 0.00000000003519 76.0
DYD3_k127_6683752_1 phosphatidylinositol metabolic process K13671 - - 0.0005096 54.0
DYD3_k127_6685783_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007268 489.0
DYD3_k127_6689570_0 - - - - 0.0000000000000000000000000000000009385 148.0
DYD3_k127_6689570_1 vacuolar iron transporter - GO:0000041,GO:0003674,GO:0005215,GO:0005381,GO:0005384,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0006810,GO:0006811,GO:0006812,GO:0006826,GO:0006828,GO:0006873,GO:0006875,GO:0006879,GO:0006880,GO:0008150,GO:0008324,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0015075,GO:0015318,GO:0016020,GO:0019725,GO:0022857,GO:0022890,GO:0030001,GO:0030003,GO:0030026,GO:0031090,GO:0034220,GO:0034755,GO:0042221,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0046873,GO:0046915,GO:0046916,GO:0048878,GO:0050801,GO:0050896,GO:0051179,GO:0051234,GO:0051235,GO:0051238,GO:0051641,GO:0051651,GO:0051716,GO:0055065,GO:0055071,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0070887,GO:0071241,GO:0071248,GO:0071281,GO:0071421,GO:0097577,GO:0098588,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0098805 - 0.00000000000000000000000009731 119.0
DYD3_k127_6689570_2 binds to the 23S rRNA K02922 - - 0.000000000000001395 78.0
DYD3_k127_6730180_0 Aminotransferase class-III K01845 - 5.4.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002163 405.0
DYD3_k127_6730180_1 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.00000000000000000000009158 113.0
DYD3_k127_6730180_2 Belongs to the ALAD family K01698 - 4.2.1.24 0.00000000000089 68.0
DYD3_k127_6741262_0 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 381.0
DYD3_k127_6745526_0 Radical_SAM C-terminal domain K07739 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.3.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000753 422.0
DYD3_k127_6745526_1 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domain of GcvH, an intermediate carrier during protein lipoylation K03800 GO:0003674,GO:0003824,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016415,GO:0016740,GO:0016746,GO:0016747,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 6.3.1.20 0.000000000000000000000000000000000005951 145.0
DYD3_k127_6745526_2 histone acetyltransferase, ELP3 family K07739 - 2.3.1.48 0.0000000000000000000000000000000458 135.0
DYD3_k127_6745721_0 Hydrolase K07025 - - 0.000000007851 66.0
DYD3_k127_6745721_1 response to copper ion - - - 0.0001392 53.0
DYD3_k127_6747582_0 Calcineurin-like phosphoesterase K07098 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 440.0
DYD3_k127_6751722_0 PFAM carboxyl transferase K01966 - 2.1.3.15,6.4.1.3 0.00000000000004339 75.0
DYD3_k127_6757570_0 PFAM NAD-dependent epimerase dehydratase K01710,K08678 - 4.1.1.35,4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005256 421.0
DYD3_k127_6757570_1 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009781 346.0
DYD3_k127_6757570_2 Glycosyl transferases group 1 - - - 0.0000000002107 73.0
DYD3_k127_6757570_3 - - - - 0.00000001436 65.0
DYD3_k127_6760163_0 deoxyhypusine monooxygenase activity K08884 - 2.7.11.1 0.0000000136 69.0
DYD3_k127_6760163_1 lyase activity K01387,K03301 - 3.4.24.3 0.0000003692 64.0
DYD3_k127_6765360_0 Amidohydrolase family K01485,K01487 - 3.5.4.1,3.5.4.3 0.00000000000000000000000000000000000000000000113 177.0
DYD3_k127_6765360_1 Helix-turn-helix domain - - - 0.0004391 44.0
DYD3_k127_6767565_0 Bacterial protein of unknown function (DUF885) - - - 0.0000000000000000000000000000000000000000000000000000000009277 222.0
DYD3_k127_6767565_1 ABC transporter K09013 - - 0.000000000000000000000000000000000000000000000000000000005875 201.0
DYD3_k127_6767565_2 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 - 0.000000000000003454 85.0
DYD3_k127_6767565_3 phenylacetate-CoA ligase activity - - - 0.00000000001257 74.0
DYD3_k127_6767565_4 4-vinyl reductase, 4VR K07013 - - 0.0000001384 63.0
DYD3_k127_6776670_0 membrane protein, required for N-linked glycosylation K07151 GO:0000030,GO:0003674,GO:0003824,GO:0004169,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006486,GO:0006493,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0016758,GO:0019538,GO:0034645,GO:0035268,GO:0035269,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044464,GO:0070085,GO:0071704,GO:0071944,GO:0097502,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.4.99.18 0.000000000000001972 89.0
DYD3_k127_6780933_0 GTP-binding protein K06883 - - 0.00000000000000000000000000000000000000000000000000000000002047 216.0
DYD3_k127_679105_0 Virulence activator alpha C-term - - - 0.0000000000000000000000000000000000000000000000007364 180.0
DYD3_k127_679105_1 PFAM Methyltransferase type 11 - - - 0.000000000000000000000000000000000000000001159 165.0
DYD3_k127_679105_2 - - - - 0.00000000000005654 76.0
DYD3_k127_679105_3 Domain of unknown function (DUF378) K09779 - - 0.00000000009468 68.0
DYD3_k127_6814386_0 Ribulose-phosphate 3 epimerase family K01783 GO:0003674,GO:0003824,GO:0004750,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009052,GO:0009056,GO:0009117,GO:0009987,GO:0016052,GO:0016853,GO:0016854,GO:0016857,GO:0019321,GO:0019323,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046483,GO:0046496,GO:0046872,GO:0051156,GO:0051186,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564,GO:1901575 5.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000005549 258.0
DYD3_k127_6814386_1 CAAX protease self-immunity K07052 - - 0.000000009645 66.0
DYD3_k127_6814386_2 COG1403 Restriction endonuclease - - - 0.0000005997 59.0
DYD3_k127_6818155_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004592 385.0
DYD3_k127_6818155_1 Transglutaminase-like superfamily - - - 0.0000000000000000000000001507 124.0
DYD3_k127_6818155_2 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.000000000000000000000001457 119.0
DYD3_k127_682159_0 Catalyzes the formation of CDP-2,3-bis-(O- geranylgeranyl)-sn-glycerol (CDP-archaeol) from 2,3-bis-(O- geranylgeranyl)-sn-glycerol 1-phosphate (DGGGP) and CTP. This reaction is the third ether-bond-formation step in the biosynthesis of archaeal membrane lipids K19664 - 2.7.7.67 0.00000000000000000000000000000000000003176 149.0
DYD3_k127_682159_1 PFAM Calcineurin-like phosphoesterase - - - 0.0000000000000005346 91.0
DYD3_k127_6827754_0 Dodecin K09165 - - 0.0000000002698 65.0
DYD3_k127_6827754_2 DinB family - - - 0.0006898 50.0
DYD3_k127_6835770_0 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005257 333.0
DYD3_k127_6835770_1 signal transduction histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007923 330.0
DYD3_k127_6835770_2 Histidine kinase - - - 0.0000000000000000002448 103.0
DYD3_k127_6839426_0 Belongs to the UbiD family K03182 - 4.1.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008048 517.0
DYD3_k127_6839426_1 FMN-dependent dehydrogenase K16422 - 1.1.3.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001419 359.0
DYD3_k127_6839426_2 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase K07575 GO:0001731,GO:0002181,GO:0002183,GO:0002188,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000002697 149.0
DYD3_k127_6839426_3 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 - 2.7.7.87 0.0000000000000000000000000000000000002163 152.0
DYD3_k127_6839426_4 helix_turn_helix ASNC type - - - 0.00000000006658 69.0
DYD3_k127_6884452_0 PFAM flavin reductase domain protein, FMN-binding K16048 - - 0.00000005592 58.0
DYD3_k127_6898427_0 aldo keto reductase K05275 - 1.1.1.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005721 368.0
DYD3_k127_6898427_1 Belongs to the UPF0337 (CsbD) family - - - 0.00003488 50.0
DYD3_k127_6902120_0 Dehydrogenase K00004,K00008,K00148 - 1.1.1.14,1.1.1.303,1.1.1.4,1.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002457 529.0
DYD3_k127_6902120_1 protein conserved in archaea K09746 - - 0.0000002742 54.0
DYD3_k127_6903684_0 ATPases associated with a variety of cellular activities K01990 - - 0.00000000000000000000000000000000000000004278 162.0
DYD3_k127_6903684_1 PFAM regulatory protein, ArsR - - - 0.00000000000000008774 90.0
DYD3_k127_6911707_0 E1-E2 ATPase K17686 - 3.6.3.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001276 268.0
DYD3_k127_6911707_1 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000008575 184.0
DYD3_k127_6911707_2 Prolyl oligopeptidase family - - - 0.0000000000000000000000000000000000000001956 162.0
DYD3_k127_6911707_3 Response regulator receiver - - - 0.000006756 54.0
DYD3_k127_6915054_0 Belongs to the cysteine synthase cystathionine beta- synthase family K01697 - 4.2.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006241 475.0
DYD3_k127_6915054_1 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.0000000000000000000000000000000000000000001383 163.0
DYD3_k127_6917280_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001929 522.0
DYD3_k127_6917280_1 COG1994 Zn-dependent proteases - - - 0.0000000000000000000000000003444 126.0
DYD3_k127_6917280_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000004929 52.0
DYD3_k127_6925375_0 PFAM FAD dependent oxidoreductase K00111 - 1.1.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003037 382.0
DYD3_k127_6925375_1 PFAM ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003977 284.0
DYD3_k127_6925375_2 PFAM ABC-2 type transporter K01992 - - 0.0000000000000000000000000000000000000000000000000000003693 207.0
DYD3_k127_6925375_3 Deacetylates O-acetyl-ADP ribose. Down-regulates ribonuclease 3 (RNase III) activity. Acts by interacting directly with the region of the ribonuclease that is required for dimerization activation - GO:0003674,GO:0003824,GO:0004857,GO:0005488,GO:0005515,GO:0008150,GO:0008428,GO:0009892,GO:0010605,GO:0016787,GO:0019213,GO:0019219,GO:0019222,GO:0019899,GO:0030234,GO:0031323,GO:0031324,GO:0032069,GO:0032074,GO:0043086,GO:0043900,GO:0044092,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051336,GO:0051346,GO:0060255,GO:0060698,GO:0060699,GO:0060700,GO:0060701,GO:0060702,GO:0061463,GO:0065007,GO:0065009,GO:0080090,GO:0098772,GO:1900190,GO:1900231 - 0.0000000000001938 73.0
DYD3_k127_6926454_0 Alpha/beta hydrolase family K22318 - - 0.000000000000000000000000000000000000000000000000000000001284 213.0
DYD3_k127_6926454_1 - - - - 0.00000000000000000000004909 104.0
DYD3_k127_6936770_0 ATPase P-type (Transporting), HAD superfamily, subfamily IC K01535,K01537 - 3.6.3.6,3.6.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001708 316.0
DYD3_k127_6936770_1 Universal stress protein - - - 0.000000000000000006569 96.0
DYD3_k127_6936770_2 2TM domain - - - 0.00000004475 65.0
DYD3_k127_6936770_3 - - - - 0.0000003508 62.0
DYD3_k127_6949967_0 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.00000000000000000000000000000000009645 144.0
DYD3_k127_695839_0 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.00000000000000000000000000000000000000000007638 173.0
DYD3_k127_695839_1 carboxylic ester hydrolase activity - - - 0.000000000008509 75.0
DYD3_k127_695839_2 Alpha beta hydrolase - - - 0.00000000005669 73.0
DYD3_k127_6961644_0 Belongs to the peptidase S8 family K13276,K17734 - - 0.0000006032 64.0
DYD3_k127_6968313_0 Predicted membrane protein (DUF2070) K08979 - - 0.000000000000000000000000000000000000000000000000000000000003768 235.0
DYD3_k127_6977583_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001818 368.0
DYD3_k127_6977583_1 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.000000000000000000000000000000000000000000000000000002823 194.0
DYD3_k127_6978836_0 DHHA1 domain K07463 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008979 390.0
DYD3_k127_6978836_1 Belongs to the aspartate-semialdehyde dehydrogenase family K00133 - 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002007 371.0
DYD3_k127_6978836_2 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002814 312.0
DYD3_k127_6978836_3 Metal-dependent hydrolases of the beta-lactamase superfamily III - - - 0.0000000000000000000000000000000000004401 150.0
DYD3_k127_6978836_4 Biotin carboxylase C-terminal domain K01959 - 6.4.1.1 0.0001485 45.0
DYD3_k127_699739_0 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008112 338.0
DYD3_k127_699739_1 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000000000000000000000000000000000000000000000000000000212 231.0
DYD3_k127_699739_2 Creatinine amidohydrolase K01470 - 3.5.2.10 0.000000000000000000000000000000000000000000006241 173.0
DYD3_k127_699739_3 COG0492 Thioredoxin reductase - - - 0.0000000000000000000000000000000005748 139.0
DYD3_k127_699739_4 peptidyl-tyrosine sulfation - - - 0.000000000003848 73.0
DYD3_k127_699926_0 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 0.000000000000000000000000000000000000000000000000000001818 221.0
DYD3_k127_699926_1 Laminin G domain - - - 0.000000000007076 78.0
DYD3_k127_7029771_0 MEDS: MEthanogen/methylotroph, DcmR Sensory domain - - - 0.00001468 55.0
DYD3_k127_706181_0 Phosphatidylserine decarboxylase K01613 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 4.1.1.65 0.000000000000000000000000000000000000000000000000000000000000000000000000003906 259.0
DYD3_k127_706181_1 CDP-alcohol phosphatidyltransferase - - - 0.00000000000000000000000007815 121.0
DYD3_k127_7064502_0 acyl-CoA dehydrogenase K18244 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 385.0
DYD3_k127_7064502_1 Immunity protein 63 - - - 0.0000000000002362 78.0
DYD3_k127_7064502_2 protein conserved in archaea - - - 0.00000165 59.0
DYD3_k127_7064502_3 Transcriptional regulator - - - 0.000005996 56.0
DYD3_k127_7068542_0 Condensation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 465.0
DYD3_k127_7068542_1 AMP-binding enzyme C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007286 271.0
DYD3_k127_7068542_2 non-ribosomal peptide synthetase - - - 0.000000000000000000002084 93.0
DYD3_k127_7069233_0 Belongs to the HMG-CoA reductase family K00054 - 1.1.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000427 415.0
DYD3_k127_7106230_0 amidohydrolase K07045 - - 0.0000000000000000000000000000000000000000000000000000000000000000003832 243.0
DYD3_k127_7106230_1 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000001836 142.0
DYD3_k127_7110527_0 Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB) K03124 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001976 300.0
DYD3_k127_7110527_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000005547 254.0
DYD3_k127_7110527_2 PHP domain K07053 - 3.1.3.97 0.00000000000000000000000000000000000000000000000000000000000000000003971 242.0
DYD3_k127_7110527_3 transcriptional regulators containing the CopG Arc MetJ DNA-binding domain and a metal-binding domain - - - 0.0000001147 57.0
DYD3_k127_7123207_0 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008483 526.0
DYD3_k127_7123207_1 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007167 427.0
DYD3_k127_7123207_2 Belongs to the V-ATPase 116 kDa subunit family K02123 - - 0.000000000000000000000000000000000000000000000000005228 196.0
DYD3_k127_7136597_0 COG1022 Long-chain acyl-CoA synthetases (AMP-forming) K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002641 337.0
DYD3_k127_7136597_1 Transcriptional regulator, ArsR family - - - 0.00000000000000000949 97.0
DYD3_k127_7136597_2 - - - - 0.000000000000003112 87.0
DYD3_k127_7136597_3 Involved in protein export. The function of the beta subunit is - GO:0003674,GO:0005085,GO:0005086,GO:0005488,GO:0005515,GO:0008150,GO:0019899,GO:0051020,GO:0065007,GO:0065009,GO:0098772 - 0.000006775 58.0
DYD3_k127_7174209_0 COG1884 Methylmalonyl-CoA mutase, N-terminal domain subunit K01848 - 5.4.99.2 0.00000000000000000000000000000000000002149 147.0
DYD3_k127_7174209_1 Belongs to the HpcH HpaI aldolase family K01644 - 4.1.3.34 0.0000000000000000002299 102.0
DYD3_k127_7174209_2 2TM domain - - - 0.00000000003083 74.0
DYD3_k127_7174209_3 Belongs to the HpcH HpaI aldolase family K01644 - 4.1.3.34 0.000000000222 62.0
DYD3_k127_7174209_4 Belongs to the HpcH HpaI aldolase family K01644 GO:0000287,GO:0003674,GO:0005488,GO:0006082,GO:0006107,GO:0008150,GO:0008152,GO:0009987,GO:0019752,GO:0043167,GO:0043169,GO:0043436,GO:0043648,GO:0044237,GO:0044281,GO:0046872,GO:0071704 4.1.3.34 0.00000001652 56.0
DYD3_k127_719620_0 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.00000000000142 75.0
DYD3_k127_719620_1 protein conserved in archaea - - - 0.0000000001834 74.0
DYD3_k127_719620_2 Endonuclease Exonuclease Phosphatase - - - 0.0002279 49.0
DYD3_k127_7198822_0 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 379.0
DYD3_k127_7198822_1 3-demethylubiquinone-9 3-methyltransferase K00568 - 2.1.1.222,2.1.1.64 0.00000000000000000000000000000000000000000000000000000000000002567 222.0
DYD3_k127_7198822_2 Glyoxalase-like domain K07032 - - 0.0000000000000000000000000000000000000000000000003319 179.0
DYD3_k127_7198822_3 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.0000000000000000000000000000000000000000007187 173.0
DYD3_k127_7198822_4 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.00000000000000001433 85.0
DYD3_k127_7198822_5 Uncharacterised protein family UPF0058 - - - 0.00000000000000001646 89.0
DYD3_k127_7198822_6 Domain of unknown function (DUF1905) - - - 0.000000000000002363 83.0
DYD3_k127_7198822_7 - - - - 0.0000000000003949 78.0
DYD3_k127_7198822_8 Uncharacterized protein containing a Zn-ribbon (DUF2116) - - - 0.0001777 46.0
DYD3_k127_7207303_0 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009748 284.0
DYD3_k127_7207303_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000001328 181.0
DYD3_k127_7207303_2 Transcriptional regulator K07332 - - 0.00000000002177 72.0
DYD3_k127_7207303_3 - - - - 0.000000002179 68.0
DYD3_k127_7207303_4 membrane-bound metal-dependent K01993,K07038 - - 0.000009855 57.0
DYD3_k127_7216630_0 PFAM Thioredoxin K03671 - - 0.00000000000000000000000000000007171 129.0
DYD3_k127_7216630_1 - - - - 0.000000000004863 77.0
DYD3_k127_723665_0 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000000000000000014 195.0
DYD3_k127_723665_1 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid K20946 - - 0.000000001238 71.0
DYD3_k127_723665_3 - - - - 0.00000009963 63.0
DYD3_k127_747369_0 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000009271 93.0
DYD3_k127_755194_0 ATP dependent DNA ligase C terminal region K01971 - 6.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002462 370.0
DYD3_k127_755194_1 DNA polymerase LigD polymerase domain K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000247 365.0
DYD3_k127_755194_2 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004271 275.0
DYD3_k127_755194_3 Bacterial regulatory proteins, tetR family - - - 0.00000000007246 70.0
DYD3_k127_77125_0 MazG-like family - - - 0.00000000000000000000000000001518 123.0
DYD3_k127_77125_1 Carbon-nitrogen hydrolase K13566 - 3.5.1.3 0.000000000000000000006158 98.0
DYD3_k127_77125_2 - - - - 0.00000000000000000002632 98.0
DYD3_k127_775910_0 TonB-dependent receptor - - - 0.0000001008 67.0
DYD3_k127_779414_0 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.000000000000000000000000000000000000000000000000000000000000007434 226.0
DYD3_k127_779414_1 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K03151 - 2.8.1.4 0.00000000000000000003749 98.0
DYD3_k127_793792_0 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000371 144.0
DYD3_k127_793792_1 - - - - 0.0000000000000000000001169 106.0
DYD3_k127_793792_2 Transcriptional regulator - - - 0.000000000000000000001421 109.0
DYD3_k127_793792_3 Protein of unknown function (DUF3293) - - - 0.000000000000000000002403 109.0
DYD3_k127_793792_4 COG0681 Signal peptidase I K13280 - 3.4.21.89 0.00000000000000005795 92.0
DYD3_k127_793792_5 LVIVD repeat - - - 0.00000000002307 77.0
DYD3_k127_798052_0 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000317 394.0
DYD3_k127_798052_1 Forms part of the polypeptide exit tunnel K02930 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000442 156.0
DYD3_k127_798876_0 Belongs to the short-chain dehydrogenases reductases (SDR) family K05886 - 1.1.1.276 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007624 283.0
DYD3_k127_798876_1 - K00960 - 2.7.7.6 0.000000000000193 72.0
DYD3_k127_802434_0 Catalytic subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. The small subunit contains the primase catalytic core and has DNA synthesis activity on its own. Binding to the large subunit stabilizes and modulates the activity, increasing the rate of DNA synthesis while decreasing the length of the DNA fragments, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair K02683 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002284 307.0
DYD3_k127_802434_1 Beta-lactamase superfamily domain - GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0031123,GO:0034414,GO:0034470,GO:0034641,GO:0034660,GO:0042779,GO:0042780,GO:0042781,GO:0043170,GO:0043628,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1905267 - 0.00000000384 65.0
DYD3_k127_844299_0 Voltage gated chloride channel K03281 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 318.0
DYD3_k127_844299_1 DHH family - - - 0.0000000000000000000000000003472 129.0
DYD3_k127_844299_2 - - - - 0.000000000000000000005293 97.0
DYD3_k127_851793_0 PFAM Phenylalanine and histidine ammonia-lyase K01745 - 4.3.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 488.0
DYD3_k127_851793_1 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000001061 228.0
DYD3_k127_851793_2 Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine residue K00809 - 2.5.1.46 0.000000000000000000000000000000000000000000008311 164.0
DYD3_k127_851793_3 PFAM GCN5-related N-acetyltransferase - - - 0.00000000000000000003133 106.0
DYD3_k127_861463_0 EamA-like transporter family - - - 0.000003813 58.0
DYD3_k127_861477_0 COG1960 Acyl-CoA dehydrogenases K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000336 303.0
DYD3_k127_861477_1 DoxX K16937 - 1.8.5.2 0.000000000000000000000000000000000000000000000000009765 186.0
DYD3_k127_862858_0 COG0665 Glycine D-amino acid oxidases (deaminating) K00303 - 1.5.3.1 0.00000000000000000000000000000005748 138.0
DYD3_k127_883618_0 Multicopper oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000998 369.0
DYD3_k127_883618_1 Mediates zinc uptake. May also transport other divalent cations - - - 0.00000000000000000000000000000000000000000000000000000000000001593 239.0
DYD3_k127_883618_2 - - - - 0.0000000000000000000005054 112.0
DYD3_k127_883618_3 - - - - 0.000000005688 62.0
DYD3_k127_910559_0 - - - - 0.00000000000000000000000000003446 135.0
DYD3_k127_943320_0 Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication K04802 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006272,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0022616,GO:0030234,GO:0030337,GO:0032991,GO:0034641,GO:0034645,GO:0042802,GO:0043170,GO:0043626,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0044796,GO:0046483,GO:0050790,GO:0065007,GO:0065009,GO:0071704,GO:0090304,GO:0098772,GO:1901360,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000518 242.0
DYD3_k127_943320_1 Belongs to the archaeal rpoM eukaryotic RPA12 RPB9 RPC11 RNA polymerase family K03057 - - 0.000000000000000000004982 96.0
DYD3_k127_943320_2 ATPases of PP-loop superfamily - - - 0.00001217 55.0
DYD3_k127_944301_0 Belongs to the peptidase S16 family K04076 - 3.4.21.53 2.681e-248 783.0
DYD3_k127_944301_1 COG1056 Nicotinamide mononucleotide adenylyltransferase K00952 - 2.7.7.1 0.000000000000000000000000000000000000000000002388 177.0
DYD3_k127_944301_2 Signal transduction histidine kinase - - - 0.00000000000000000000000000000000000000000003626 176.0
DYD3_k127_944301_3 Phytochrome region - - - 0.00009355 52.0
DYD3_k127_977266_0 COG0477 Permeases of the major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001343 291.0
DYD3_k127_977266_1 COG1960 Acyl-CoA dehydrogenases - - - 0.00000000000000000000000000000000000000001254 160.0
DYD3_k127_977266_2 COG0475 Kef-type K transport systems, membrane components K03455 - - 0.000000000009871 72.0
DYD3_k127_977266_3 Tetratricopeptide repeat - - - 0.0000001239 64.0
DYD3_k127_97788_0 Arsenical pump membrane protein - - - 0.00000008825 55.0
DYD3_k127_979957_0 ATP-dependent protease La (LON) substrate-binding domain K01338,K07157 - 3.4.21.53 0.0000000002237 65.0
DYD3_k127_979957_1 - - - - 0.000007881 58.0
DYD3_k127_982877_0 Photosynthesis system II assembly factor YCF48 - - - 0.0006933 51.0
DYD3_k127_990697_0 peptidase activity, acting on L-amino acid peptides K01337,K05994,K20276 - 3.4.11.10,3.4.21.50 0.00000000000004541 84.0
DYD3_k127_990697_1 Involved in the activation and reutilization of phytol from chlorophyll degradation in plant metabolism, including tocopherol biosynthesis. Catalyzes the conversion of phytol to phytol monophosphate (PMP) (By similarity) K18678 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006766,GO:0006775,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009507,GO:0009536,GO:0009987,GO:0010189,GO:0010276,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0042360,GO:0042362,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901576,GO:1901615,GO:1901617 2.7.1.182 0.00005652 55.0