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Overview

ID MAG00971
Name DYD3_bin.46
Sample SMP0027
Taxonomy
Kingdom Bacteria
Phylum Bacteroidota
Class Bacteroidia
Order Cytophagales
Family Cyclobacteriaceae
Genus ELB16-189
Species
Assembly information
Completeness (%) 85.9
Contamination (%) 1.71
GC content (%) 40.0
N50 (bp) 9,385
Genome size (bp) 4,222,233

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes3781

Gene name Description KEGG GOs EC E-value Score Sequence
DYD3_k127_100089_0 Belongs to the DapA family K01714,K21062 - 3.5.4.22,4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 451.0
DYD3_k127_100089_1 Bestrophin, RFP-TM, chloride channel K08994 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005703 334.0
DYD3_k127_100089_2 Putative collagen-binding domain of a collagenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004788 289.0
DYD3_k127_1002268_0 TIGRFAM cytochrome c oxidase accessory protein - - - 2.949e-200 633.0
DYD3_k127_1002268_1 Cytochrome c biogenesis protein transmembrane region K04084 - 1.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007162 486.0
DYD3_k127_1002268_2 TIGRFAM cytochrome c oxidase, cbb3-type, subunit III K00406 - - 0.000000000000000000000000000000000000000000000000000000000000000000001123 247.0
DYD3_k127_1002268_3 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.000000000000000000000000000001316 129.0
DYD3_k127_1002268_4 FixH K09926 - - 0.00000000000000000000001902 104.0
DYD3_k127_1002268_5 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.000000000000000000002101 98.0
DYD3_k127_1002268_6 Belongs to the heme-copper respiratory oxidase family K15862 - 1.9.3.1 0.000000000000000000008799 93.0
DYD3_k127_1002268_7 PFAM Cbb3-type cytochrome oxidase component FixQ - - - 0.0000000004549 63.0
DYD3_k127_1038416_0 Glycosyl hydrolase family 3 N terminal domain - - - 7.939e-229 740.0
DYD3_k127_1038416_1 PFAM Glycosyl transferases group 1 K00754 - - 1.962e-199 626.0
DYD3_k127_1038416_2 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003306 294.0
DYD3_k127_1038416_3 - - - - 0.00000008567 58.0
DYD3_k127_1044542_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 8.772e-266 832.0
DYD3_k127_1044542_1 Belongs to the glycosyl hydrolase 43 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 501.0
DYD3_k127_1044542_2 Glycosyl hydrolases family 32 N-terminal domain K01193 - 3.2.1.26 0.00000000000000000000000000000000000000000000000000000000006721 207.0
DYD3_k127_1047943_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 7.412e-237 741.0
DYD3_k127_1047943_1 tRNA synthetase class II core domain (G, H, P, S and T) K01875 - 6.1.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002555 443.0
DYD3_k127_1047943_2 Y_Y_Y domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007403 348.0
DYD3_k127_1047943_3 YceI-like domain - - - 0.0000000000000000000000000000000000000000000006745 171.0
DYD3_k127_1049699_0 Superfamily I DNA and RNA - - - 0.0 1217.0
DYD3_k127_1049699_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 2.519e-318 986.0
DYD3_k127_1049699_2 cellulose binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002208 391.0
DYD3_k127_1049699_3 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004017 281.0
DYD3_k127_1049699_4 Helix-hairpin-helix motif - - - 0.0000000000000000000000000000000000000000000000000000585 199.0
DYD3_k127_1049699_5 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000000000000000000000001502 172.0
DYD3_k127_1049699_6 PFAM Biotin lipoate A B protein ligase K03524 - 6.3.4.15 0.00000000000000000000000001382 111.0
DYD3_k127_1057752_0 Membrane protein involved in D-alanine export K19294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006091 589.0
DYD3_k127_1057752_1 DHHW protein - - - 0.0000000000114 70.0
DYD3_k127_1091086_0 Penicillin amidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003768 595.0
DYD3_k127_1091086_1 Sialate O-acetylesterase K05970 - 3.1.1.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 573.0
DYD3_k127_1091086_2 chorismate mutase K04516 - 5.4.99.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004115 517.0
DYD3_k127_1091086_3 PFAM Aminotransferase class I and II K10206,K14261 - 2.6.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 471.0
DYD3_k127_1091086_4 Prephenate dehydrogenase K04517 - 1.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008727 325.0
DYD3_k127_1091086_5 Prephenate dehydratase K04518 - 4.2.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008497 304.0
DYD3_k127_1091086_6 Outer membrane protein beta-barrel domain - - - 0.00000000000000000000000000000000000001302 151.0
DYD3_k127_1091086_7 Rieske (2fe-2S) K00499 - 1.14.15.7 0.000000000000002689 76.0
DYD3_k127_1116108_0 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001309 317.0
DYD3_k127_1116108_1 Aminopeptidase N - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002339 307.0
DYD3_k127_1116108_2 Ribosomal protein L11 methyltransferase K02687 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000324 278.0
DYD3_k127_1116108_3 HupE / UreJ protein - - - 0.0000000000000000000000000000000000000000000000000000000000001926 218.0
DYD3_k127_1116108_4 - - - - 0.0000000000000000000000000000004435 127.0
DYD3_k127_1116108_5 - - - - 0.00001187 53.0
DYD3_k127_1124418_0 PFAM Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.21.26 9.4e-323 1000.0
DYD3_k127_1124418_1 MacB-like periplasmic core domain - - - 3.639e-294 927.0
DYD3_k127_1124418_2 FtsX-like permease family - - - 5.499e-290 915.0
DYD3_k127_1124418_3 FtsX-like permease family - - - 3.013e-237 761.0
DYD3_k127_1124418_4 FtsX-like permease family - - - 2.096e-205 668.0
DYD3_k127_1124418_5 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000000000000000000001289 166.0
DYD3_k127_1141863_0 PFAM SMP-30 Gluconolaconase K01053 - 3.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 316.0
DYD3_k127_1141863_1 Domain of unknown function (DUF4421) - - - 0.0000000000000000000000000000000052 141.0
DYD3_k127_1141863_2 C-terminal domain of CHU protein family - - - 0.0000000000000000003396 95.0
DYD3_k127_1183056_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 0.0 1446.0
DYD3_k127_1183056_1 ADP-ribosylglycohydrolase - - - 6.376e-240 750.0
DYD3_k127_1183056_10 Involved in DNA repair and RecF pathway recombination K03584 - - 0.00000000000000000000000000000000000000000000000000000000000003106 221.0
DYD3_k127_1183056_11 PFAM Activator of Hsp90 ATPase 1 family protein - - - 0.00000000000000000000000000000000000000000000000000000001703 199.0
DYD3_k127_1183056_12 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000000000004706 163.0
DYD3_k127_1183056_13 proton-transporting ATP synthase activity, rotational mechanism K02114 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0000000000000000000000003802 106.0
DYD3_k127_1183056_14 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000000000000005643 112.0
DYD3_k127_1183056_15 YceI-like domain - - - 0.0000000000000000000000248 107.0
DYD3_k127_1183056_16 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0000000000000000001575 92.0
DYD3_k127_1183056_17 protease - - - 0.0000000000000000001616 94.0
DYD3_k127_1183056_18 helix_turn_helix, arabinose operon control protein - - - 0.0000000000001041 78.0
DYD3_k127_1183056_19 TonB-linked outer membrane protein, SusC RagA family - - - 0.0000000000003138 81.0
DYD3_k127_1183056_2 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 3.195e-223 696.0
DYD3_k127_1183056_20 Gram-negative bacterial TonB protein C-terminal - - - 0.00005299 55.0
DYD3_k127_1183056_3 amino acid K03294 - - 1.419e-212 670.0
DYD3_k127_1183056_4 Sugar transport protein K05340 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005982 457.0
DYD3_k127_1183056_5 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 404.0
DYD3_k127_1183056_6 ribosylpyrimidine nucleosidase activity K01250 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002709 397.0
DYD3_k127_1183056_7 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway K00852 - 2.7.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006357 345.0
DYD3_k127_1183056_8 Rhodanese Homology Domain K06917 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003 322.0
DYD3_k127_1183056_9 PFAM Tetrapyrrole (Corrin Porphyrin) Methylases K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000000001387 257.0
DYD3_k127_1205297_0 Domain of unknown function (DUF5117) - - - 0.0 1054.0
DYD3_k127_1205297_1 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009481 529.0
DYD3_k127_1205297_2 LytTr DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 316.0
DYD3_k127_1205297_3 PFAM histidine kinase internal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 312.0
DYD3_k127_1205297_4 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006364 309.0
DYD3_k127_1205297_5 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002559 268.0
DYD3_k127_1205297_6 SpoU rRNA Methylase family K03437 - - 0.0000000000000000000000000000000000000000000000000000000000002715 216.0
DYD3_k127_1205297_7 Protein of unknown function (DUF433) - - - 0.00000000000000000002463 92.0
DYD3_k127_1205297_8 - - - - 0.000000000000411 72.0
DYD3_k127_1205297_9 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.000006058 51.0
DYD3_k127_1211662_0 Heat shock 70 kDa protein K04043 - - 0.0 1015.0
DYD3_k127_1211662_1 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005478 329.0
DYD3_k127_1211662_2 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000001676 230.0
DYD3_k127_1219736_0 Peptidase family M50 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005998 403.0
DYD3_k127_1219736_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008006 381.0
DYD3_k127_1219736_2 PFAM PASTA domain K01921,K08884,K12132 - 2.7.11.1,6.3.2.4 0.0000000000000000000000000002607 118.0
DYD3_k127_1223867_0 Chitobiase/beta-hexosaminidase C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 554.0
DYD3_k127_1223867_1 Protein of unknown function (DUF1501) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006938 392.0
DYD3_k127_1223867_2 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000162 310.0
DYD3_k127_1223867_3 Protein of unknown function (DUF1684) K09164 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001631 274.0
DYD3_k127_1223867_4 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696,K01817 - 4.2.1.20,5.3.1.24 0.0000000000000000000133 91.0
DYD3_k127_1223867_5 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.000000000888 60.0
DYD3_k127_1235320_0 Cys/Met metabolism PLP-dependent enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000242 493.0
DYD3_k127_1235320_1 CarboxypepD_reg-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002101 340.0
DYD3_k127_1235320_2 hydroxylase K15746 - 1.14.15.24 0.0000000000000000000000000000000000000000000000000848 183.0
DYD3_k127_1235320_3 ABC transporter transmembrane region K18890 - - 0.0000000000000000000005511 95.0
DYD3_k127_1236615_0 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001701 477.0
DYD3_k127_1236615_1 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000000000008972 213.0
DYD3_k127_1236615_2 - - - - 0.000000000000000000000000000000000000000000000000000000000001171 214.0
DYD3_k127_1236615_3 MazG-like family - - - 0.0000000000000000000000000001136 116.0
DYD3_k127_1236615_4 Belongs to the HesB IscA family K13628 - - 0.0000000000000000000000000008781 115.0
DYD3_k127_1236615_5 CobW/HypB/UreG, nucleotide-binding domain - - - 0.00000000000004825 76.0
DYD3_k127_1242083_0 Peptidase M16 inactive domain - - - 6.079e-251 791.0
DYD3_k127_1242083_1 PFAM Peptidase M16 inactive domain - - - 1.535e-212 667.0
DYD3_k127_1242244_0 Domain of unknown function (DUF5127) - - - 5.669e-312 974.0
DYD3_k127_1242244_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 1.789e-238 753.0
DYD3_k127_1242244_10 Tellurite resistance protein TerB - - - 0.00000000000000000000000000000000000000000000002192 173.0
DYD3_k127_1242244_11 PFAM Anti-sigma-K factor RskA - - - 0.00000000000000000000000000000000000000000001229 171.0
DYD3_k127_1242244_12 Belongs to the UPF0312 family - - - 0.0000000000000000000000000000000000371 137.0
DYD3_k127_1242244_13 Phosphoglucomutase/phosphomannomutase, C-terminal domain K01835 - 5.4.2.2 0.0000000000000000000009558 96.0
DYD3_k127_1242244_2 lysine biosynthetic process via aminoadipic acid - - - 3.567e-237 754.0
DYD3_k127_1242244_3 PFAM Glyoxalase bleomycin resistance protein dioxygenase K00457 - 1.13.11.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000419 548.0
DYD3_k127_1242244_4 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003442 380.0
DYD3_k127_1242244_5 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005228 288.0
DYD3_k127_1242244_6 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004546 282.0
DYD3_k127_1242244_7 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000007218 215.0
DYD3_k127_1242244_8 Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC) K15460 GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016426,GO:0016430,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.223 0.00000000000000000000000000000000000000000000000000004471 195.0
DYD3_k127_1242244_9 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000005226 183.0
DYD3_k127_1247048_0 Phage integrase, N-terminal SAM-like domain K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003081 293.0
DYD3_k127_1247048_1 - - - - 0.000000000000000000989 89.0
DYD3_k127_1272533_0 Alpha amylase, catalytic domain K01176 - 3.2.1.1 5.759e-234 736.0
DYD3_k127_1272533_1 Transcriptional regulator, Crp Fnr family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003582 465.0
DYD3_k127_1272533_2 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.000000000000000000000000000000000000000000000000008235 184.0
DYD3_k127_1272533_3 PFAM Sigma 54 modulation protein S30EA ribosomal protein K05808 - - 0.000001623 52.0
DYD3_k127_127368_0 Two component regulator three Y domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000281 379.0
DYD3_k127_127368_1 Two component regulator propeller - - - 0.000000000000000000000000000000000000000000000000000000003453 215.0
DYD3_k127_1276897_0 PFAM Bacterial membrane protein YfhO - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003 581.0
DYD3_k127_1276897_1 COGs COG4299 conserved - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 430.0
DYD3_k127_1279559_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1303.0
DYD3_k127_1279559_1 PFAM Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001761 369.0
DYD3_k127_1279559_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 324.0
DYD3_k127_1279559_3 PFAM ROK family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003579 256.0
DYD3_k127_1279559_4 WHG domain - - - 0.00000000000000000000000000000000000000000000000000002273 194.0
DYD3_k127_1279559_5 PFAM YcfA-like protein - - - 0.0000000000000000001014 89.0
DYD3_k127_1279559_6 PFAM Uncharacterised protein family UPF0150 - - - 0.00000000000000001106 83.0
DYD3_k127_1280092_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K15726 - - 0.0 1467.0
DYD3_k127_1280092_1 unfolded protein binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000355 615.0
DYD3_k127_1280092_10 Putative auto-transporter adhesin, head GIN domain - - - 0.0006689 46.0
DYD3_k127_1280092_2 Thiol oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005795 533.0
DYD3_k127_1280092_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K15727 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 317.0
DYD3_k127_1280092_4 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K15726 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005756 273.0
DYD3_k127_1280092_5 Helix-turn-helix diphteria tox regulatory element K03709 - - 0.000000000000000000000000000000000000000000000000000000000006496 214.0
DYD3_k127_1280092_6 Rieske [2Fe-2S] domain - - - 0.0000000000000000000000000000000000000000000009283 169.0
DYD3_k127_1280092_7 - - - - 0.0000000000000000000000000000003572 130.0
DYD3_k127_1280092_8 - - - - 0.0000000000000007999 82.0
DYD3_k127_1280092_9 FtsX-like permease family K02004 - - 0.00000000001654 64.0
DYD3_k127_1280589_0 Insulinase (Peptidase family M16) K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004991 542.0
DYD3_k127_1280589_1 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000002078 95.0
DYD3_k127_1280589_2 Insulinase (Peptidase family M16) K07263 - - 0.000000000000003992 76.0
DYD3_k127_1286014_0 Acyl-CoA dehydrogenase, middle domain K00232 - 1.3.3.6 2.307e-312 974.0
DYD3_k127_1300652_0 ASPIC UnbV domain protein - - - 4.511e-270 848.0
DYD3_k127_1300652_1 SusD family K21572 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006165 286.0
DYD3_k127_1314699_0 Alpha amylase, catalytic domain - - - 6.3e-203 648.0
DYD3_k127_1314699_1 SPTR Phosphoesterase, PA-phosphatase related - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003003 525.0
DYD3_k127_1314699_10 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003477 305.0
DYD3_k127_1314699_11 TPR repeat-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004999 301.0
DYD3_k127_1314699_12 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001679 259.0
DYD3_k127_1314699_13 Uncharacterized protein conserved in bacteria (DUF2147) - - - 0.00000000000000000000000000000000000000000000000002034 183.0
DYD3_k127_1314699_14 Transmembrane family 220, helix - - - 0.0000000000000002873 83.0
DYD3_k127_1314699_15 - - - - 0.000000000001518 72.0
DYD3_k127_1314699_2 glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 450.0
DYD3_k127_1314699_3 Belongs to the GTP cyclohydrolase I type 2 NIF3 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006358 438.0
DYD3_k127_1314699_4 Putative porin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002193 430.0
DYD3_k127_1314699_5 Belongs to the MIP aquaporin (TC 1.A.8) family K02440 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 348.0
DYD3_k127_1314699_6 Zn-ribbon protein, possibly nucleic acid-binding K07164 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006191 346.0
DYD3_k127_1314699_7 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 317.0
DYD3_k127_1314699_8 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA K06169 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000978 310.0
DYD3_k127_1314699_9 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006222 312.0
DYD3_k127_1316137_0 PFAM GH3 auxin-responsive promoter - - - 2.969e-234 731.0
DYD3_k127_1316137_1 PFAM coagulation factor 5 8 type K01206 - 3.2.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005981 568.0
DYD3_k127_1316137_2 TonB dependent receptor K16087 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008732 542.0
DYD3_k127_1316137_3 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000001605 270.0
DYD3_k127_1316137_4 InterPro IPR008538 - - - 0.000025 48.0
DYD3_k127_132740_0 DNA primase, small subunit - - - 0.000000000000000000000000000000000000013 149.0
DYD3_k127_132740_1 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000001397 122.0
DYD3_k127_132740_2 - - - - 0.000000000000000000000000002246 115.0
DYD3_k127_132740_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000001343 119.0
DYD3_k127_132740_4 Domain of unknown function (DUF4870) - - - 0.0000000000000000000000008886 111.0
DYD3_k127_132740_5 Putative collagen-binding domain of a collagenase - - - 0.000447 42.0
DYD3_k127_1345197_0 Glycosyl-hydrolase 97 C-terminal, oligomerisation - - - 2.207e-201 642.0
DYD3_k127_1345197_1 PFAM Alginate lyase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001179 242.0
DYD3_k127_135537_0 PFAM Stage II sporulation protein E (SpoIIE) - - - 2.505e-210 669.0
DYD3_k127_135537_1 oxidoreductase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002043 377.0
DYD3_k127_135537_2 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.00000000000000000000000000000000001646 138.0
DYD3_k127_135537_3 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K04757 - 2.7.11.1 0.000000000000000000000000000000001691 133.0
DYD3_k127_1372357_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 1910.0
DYD3_k127_1372357_1 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 - 1.17.4.1 0.0 1335.0
DYD3_k127_1372357_2 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) K01876 - 6.1.1.12 2.173e-304 940.0
DYD3_k127_1372357_3 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000004151 224.0
DYD3_k127_1372357_4 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.0000000000000000000000000000000000000000000000000000000004899 204.0
DYD3_k127_1372357_5 Protein of unknown function (DUF3467) - - - 0.00000000000000000000000000000000000000000000000002117 180.0
DYD3_k127_1372357_6 - - - - 0.0000000000000000000000000000000000000000000000001621 182.0
DYD3_k127_1372357_7 Clostripain family - - - 0.00000000000000000000000000000000000001418 158.0
DYD3_k127_1389201_0 Phosphate acyltransferases K07003 - - 0.0 1144.0
DYD3_k127_1389201_1 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005591 596.0
DYD3_k127_1389201_11 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.0000000000000000000000001287 110.0
DYD3_k127_1389201_12 FabA-like domain K02372 - 4.2.1.59 0.0000000000000000000003893 100.0
DYD3_k127_1389201_13 Transcriptional regulator - - - 0.000000000000000008586 86.0
DYD3_k127_1389201_14 BRO family, N-terminal domain - - - 0.00005159 46.0
DYD3_k127_1389201_2 Flavin containing amine oxidoreductase K09516 - 1.3.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001776 573.0
DYD3_k127_1389201_3 AMP-binding enzyme K01912 - 6.2.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005202 520.0
DYD3_k127_1389201_4 Heat shock 70 kDa protein K04043 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005503 437.0
DYD3_k127_1389201_5 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 430.0
DYD3_k127_1389201_6 BRO family, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002337 331.0
DYD3_k127_1389201_7 Belongs to the Dps family K04047 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001291 247.0
DYD3_k127_1389201_8 Polysaccharide deacetylase K22278 - 3.5.1.104 0.0000000000000000000000000000000000000000000000000000000003101 211.0
DYD3_k127_1389201_9 Outer membrane lipoprotein carrier protein LolA K03634 - - 0.00000000000000000000000000000000000000000000000000000000107 207.0
DYD3_k127_1401681_0 sulfatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005255 437.0
DYD3_k127_1401681_1 Belongs to the DegT DnrJ EryC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003354 399.0
DYD3_k127_1401681_2 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002044 303.0
DYD3_k127_1401681_3 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.000000000000000000000000000000000000000001874 156.0
DYD3_k127_1401681_4 nitrite reductase [NAD(P)H] activity - - - 0.0000000000000000000000000000004298 128.0
DYD3_k127_1406258_0 Domain of unknown function (DUF4872) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002183 392.0
DYD3_k127_1406258_1 - - - - 0.0000000000000000000000000000004651 125.0
DYD3_k127_1406258_2 Multidrug ABC transporter ATPase K01990 - - 0.000000000000000000000000000001574 123.0
DYD3_k127_1431164_0 lysine biosynthetic process via aminoadipic acid - - - 0.0 1088.0
DYD3_k127_1431164_1 FtsX-like permease family - - - 1.292e-267 849.0
DYD3_k127_1431164_2 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000001493 221.0
DYD3_k127_1431164_3 YceI-like domain - - - 0.000000000000000000000000000000000000000001112 162.0
DYD3_k127_1431164_4 Adenylyl- / guanylyl cyclase, catalytic domain K01768 GO:0000429,GO:0000430,GO:0000433,GO:0001678,GO:0003674,GO:0003824,GO:0004016,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005783,GO:0005789,GO:0005829,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006171,GO:0006355,GO:0006357,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0007186,GO:0007187,GO:0007188,GO:0007189,GO:0007264,GO:0007265,GO:0007584,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009187,GO:0009190,GO:0009259,GO:0009260,GO:0009605,GO:0009743,GO:0009746,GO:0009749,GO:0009756,GO:0009757,GO:0009889,GO:0009890,GO:0009892,GO:0009975,GO:0009987,GO:0009991,GO:0010033,GO:0010182,GO:0010255,GO:0010468,GO:0010515,GO:0010556,GO:0010558,GO:0010605,GO:0010619,GO:0010629,GO:0012505,GO:0016020,GO:0016829,GO:0016849,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019637,GO:0019693,GO:0019725,GO:0019932,GO:0019933,GO:0019935,GO:0023052,GO:0030145,GO:0031135,GO:0031137,GO:0031138,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0031984,GO:0033500,GO:0034284,GO:0034641,GO:0034654,GO:0035556,GO:0042175,GO:0042221,GO:0042592,GO:0042593,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043900,GO:0043901,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045013,GO:0045014,GO:0045892,GO:0045934,GO:0045990,GO:0046015,GO:0046058,GO:0046390,GO:0046483,GO:0046872,GO:0046914,GO:0046999,GO:0048519,GO:0048523,GO:0048878,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051716,GO:0052652,GO:0055082,GO:0055086,GO:0060255,GO:0061984,GO:0061985,GO:0061986,GO:0061987,GO:0065007,GO:0065008,GO:0070887,GO:0071310,GO:0071322,GO:0071326,GO:0071331,GO:0071333,GO:0071496,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0080090,GO:0090407,GO:0098827,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1901701,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2000241,GO:2000242,GO:2001141 4.6.1.1 0.00000000000000000000000007169 122.0
DYD3_k127_1431164_5 - - - - 0.0000002489 60.0
DYD3_k127_1431164_6 Mu transposase, C-terminal K07497 - - 0.0002412 49.0
DYD3_k127_1443395_0 Isocitrate dehydrogenase K00031 - 1.1.1.42 7.324e-216 674.0
DYD3_k127_1443395_1 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002949 443.0
DYD3_k127_1443395_2 transcriptional regulator K03719,K05800 - - 0.0000000000000000000000000000000000000000000000000000000000000000001906 233.0
DYD3_k127_1443395_3 Pyrimidine operon attenuation protein uracil phosphoribosyltransferase K02825 - 2.4.2.9 0.0000000000000000000000000000000000000000000000001982 181.0
DYD3_k127_1443395_4 PKD domain - - - 0.00000000000000000000002615 108.0
DYD3_k127_1449010_0 PFAM Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002282 286.0
DYD3_k127_1449010_1 Belongs to the IlvD Edd family - - - 0.0000000000000000000000000001082 116.0
DYD3_k127_1449010_2 - - - - 0.000000000000000000000002571 108.0
DYD3_k127_1449272_0 COGs COG0471 Di- and tricarboxylate transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009388 567.0
DYD3_k127_1449272_1 Belongs to the KdsA family K01627 - 2.5.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 412.0
DYD3_k127_1449272_2 Catalyzes the synthesis of activated sulfate K00860 GO:0003674,GO:0003824,GO:0004020,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237 2.7.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000002164 247.0
DYD3_k127_1466459_0 CHAT domain - - - 0.0 1387.0
DYD3_k127_1466459_1 Methylmalonyl-CoA mutase K01847 - 5.4.99.2 0.0 1042.0
DYD3_k127_1466459_2 PFAM GH3 auxin-responsive promoter - - - 6.038e-243 758.0
DYD3_k127_1466459_3 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 5.118e-197 624.0
DYD3_k127_1466459_4 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002702 571.0
DYD3_k127_1466459_5 serine-type endopeptidase activity K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000353 450.0
DYD3_k127_1466459_6 Methylmalonyl-CoA mutase N-terminal domain subunit K01847 - 5.4.99.2 0.0000000000000000000000000000005029 135.0
DYD3_k127_1466459_7 Nucleotidyltransferase domain K07075 - - 0.00000000000000000003794 93.0
DYD3_k127_1476648_0 Transposase and inactivated derivatives K07497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009364 370.0
DYD3_k127_1476648_1 WD40-like Beta Propeller Repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 336.0
DYD3_k127_1476648_2 Transposase K07497 - - 0.0000000000000000000000000000000003921 132.0
DYD3_k127_1486303_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 3.679e-209 661.0
DYD3_k127_1486303_1 TonB-dependent Receptor Plug K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 489.0
DYD3_k127_1490817_0 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 362.0
DYD3_k127_1490817_1 Nitroreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009688 341.0
DYD3_k127_1490817_10 CAAX protease self-immunity K07052 - - 0.0000001123 63.0
DYD3_k127_1490817_2 AraC family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004836 291.0
DYD3_k127_1490817_4 Belongs to the PRA-CH family K11755 - 3.5.4.19,3.6.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009543 273.0
DYD3_k127_1490817_5 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002804 276.0
DYD3_k127_1490817_6 Sigma-70 region 2 - - - 0.00000000000000000000000000000000000000000000000000000000003955 209.0
DYD3_k127_1490817_7 PFAM Membrane protein of K08972 - - 0.0000000000000000000000000000007981 124.0
DYD3_k127_1490817_8 SMART Nucleotide binding protein, PINc - - - 0.00000000000000000002116 93.0
DYD3_k127_1490817_9 SNO glutamine amidotransferase family K02501 - - 0.000000000000000001711 85.0
DYD3_k127_155821_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00367 - 1.7.7.2 0.0 1589.0
DYD3_k127_155821_1 Rubredoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004936 509.0
DYD3_k127_155821_10 - - - - 0.00000000000000000000000000226 117.0
DYD3_k127_155821_2 Binding-protein-dependent transport system inner membrane component K15577 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004089 466.0
DYD3_k127_155821_3 Large extracellular alpha-helical protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001866 464.0
DYD3_k127_155821_4 ATPases associated with a variety of cellular activities K02049,K15579 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004794 420.0
DYD3_k127_155821_5 ATPases associated with a variety of cellular activities K15578 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 410.0
DYD3_k127_155821_6 - - - - 0.00000000000000000000000000000000000000000000000004915 184.0
DYD3_k127_155821_7 prohibitin homologues K07192 - - 0.00000000000000000000000000000000000000000000002412 173.0
DYD3_k127_155821_8 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.00000000000000000000000000000000000000000001207 164.0
DYD3_k127_155821_9 - - - - 0.000000000000000000000000000000000006379 139.0
DYD3_k127_1566976_0 MacB-like periplasmic core domain - - - 7.719e-219 697.0
DYD3_k127_1566976_1 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005918 431.0
DYD3_k127_1566976_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001578 246.0
DYD3_k127_156918_0 PFAM Carbamoyl-phosphate synthase L chain, ATP binding K01955 - 6.3.5.5 0.0 1593.0
DYD3_k127_156918_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000004881 175.0
DYD3_k127_1590343_0 Belongs to the glycosyl hydrolase 31 family K01811 - 3.2.1.177 0.0 1068.0
DYD3_k127_1590343_1 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 547.0
DYD3_k127_1590343_10 - - - - 0.000000000000000000000000000000007836 138.0
DYD3_k127_1590343_11 Uncharacterised protein family (UPF0175) - - - 0.000000000000000009011 85.0
DYD3_k127_1590343_2 Belongs to the DEAD box helicase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 512.0
DYD3_k127_1590343_3 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K01740,K10764 - 2.5.1.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 396.0
DYD3_k127_1590343_4 Protein of unknown function (DUF1428) - - - 0.0000000000000000000000000000000000000000000000000000000000000000001745 233.0
DYD3_k127_1590343_5 short-chain dehydrogenase K07124 - - 0.0000000000000000000000000000000000000000000000000000000000001613 223.0
DYD3_k127_1590343_6 Protein of unknown function (DUF2781) - - - 0.0000000000000000000000000000000000000000000000000000001254 199.0
DYD3_k127_1590343_7 Domain of unknown function (DUF3368) - - - 0.0000000000000000000000000000000000000000235 156.0
DYD3_k127_1590343_8 OsmC-like protein K07397 - - 0.0000000000000000000000000000000000000004659 152.0
DYD3_k127_1590343_9 Methyltransferase domain - - - 0.0000000000000000000000000000000001161 141.0
DYD3_k127_1597348_0 Nucleotidyl transferase K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 453.0
DYD3_k127_1597348_1 PFAM Tetratricopeptide - - - 0.000000000000000000000000000000000000000000000000000000000000000000001563 252.0
DYD3_k127_1597348_2 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000006758 220.0
DYD3_k127_1612754_0 Esterase of the alpha-beta hydrolase superfamily - - - 2.492e-254 805.0
DYD3_k127_1612754_2 cell adhesion involved in biofilm formation - - - 0.0005692 43.0
DYD3_k127_1617248_0 PFAM GlcNAc-PI de-N-acetylase - - - 7.465e-291 915.0
DYD3_k127_1617248_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 1.347e-196 629.0
DYD3_k127_1617248_2 Protein of unknown function (DUF2911) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002131 271.0
DYD3_k127_1617248_3 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.0000000000000000000000000000000000000000000000000000000000002224 217.0
DYD3_k127_1617248_4 Binds together with S18 to 16S ribosomal RNA K02990 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904 - 0.00000000002665 64.0
DYD3_k127_1617248_5 Belongs to the ompA family - - - 0.00000000006166 65.0
DYD3_k127_1618271_0 Histidine ammonia-lyase K01745 - 4.3.1.3 4.439e-218 686.0
DYD3_k127_1618271_1 Tetratricopeptide repeat protein - - - 2.637e-201 643.0
DYD3_k127_1618271_10 nuclease activity K06218 - - 0.00002911 49.0
DYD3_k127_1618271_2 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase K00162 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005557 555.0
DYD3_k127_1618271_3 tRNA synthetase class II core domain (G, H, P, S and T) K01892 - 6.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301 516.0
DYD3_k127_1618271_4 C-terminal domain of CHU protein family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006655 393.0
DYD3_k127_1618271_5 PFAM Glycosyl transferase family 2 K07011 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000159 370.0
DYD3_k127_1618271_6 PFAM Flavin reductase like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009557 332.0
DYD3_k127_1618271_7 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.000000000000000000000000000000000000000001584 158.0
DYD3_k127_1618271_8 PFAM PspC domain - - - 0.000000000000000002937 87.0
DYD3_k127_1639719_0 dihydroorotate dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005749 297.0
DYD3_k127_1639719_1 Sulfate permease family K03321 - - 0.000000000000000000000000000000000000000000000000000000003387 205.0
DYD3_k127_1639719_2 Maltogenic Amylase, C-terminal domain - - - 0.0000000000000000000000000000000004583 135.0
DYD3_k127_1639719_3 Universal stress protein family - - - 0.000001383 59.0
DYD3_k127_165259_0 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol - - - 2.491e-229 720.0
DYD3_k127_165259_1 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001811 427.0
DYD3_k127_165259_2 Amino acid permease K03294,K03758 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 372.0
DYD3_k127_165259_3 PhoQ Sensor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007935 366.0
DYD3_k127_165259_4 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 336.0
DYD3_k127_165259_5 signal transduction histidine kinase - - - 0.000000000000000000000000000000000000000000000000000003841 206.0
DYD3_k127_165259_6 amidohydrolase K07046 - - 0.00003259 46.0
DYD3_k127_1663488_0 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002308 590.0
DYD3_k127_1663488_1 toxin-antitoxin system toxin component, PIN family - - - 0.000000000000000000004894 94.0
DYD3_k127_1663488_2 - - - - 0.000000000000007323 76.0
DYD3_k127_1664865_0 TonB-dependent Receptor Plug - - - 2.712e-318 992.0
DYD3_k127_1664865_1 COGs COG0058 Glucan phosphorylase K00688,K00691 - 2.4.1.1,2.4.1.8 1.113e-224 709.0
DYD3_k127_1664865_10 - - - - 0.000000000000000000345 94.0
DYD3_k127_1664865_11 - - - - 0.00000000000000001591 90.0
DYD3_k127_1664865_2 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 330.0
DYD3_k127_1664865_3 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009608 280.0
DYD3_k127_1664865_4 Protein of unknown function (DUF1572) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001229 267.0
DYD3_k127_1664865_5 Domain of unknown function (DUF4249) - - - 0.00000000000000000000000000000000000000000000000000000000000000005722 233.0
DYD3_k127_1664865_6 Putative zinc- or iron-chelating domain K06940 - - 0.00000000000000000000000000000000000000000000000000000000001171 210.0
DYD3_k127_1664865_7 Psort location CytoplasmicMembrane, score - - - 0.0000000000000000000000000000000000000000004765 164.0
DYD3_k127_1664865_8 Winged helix DNA-binding domain - - - 0.00000000000000000000000000000000000003881 145.0
DYD3_k127_1664865_9 PFAM histidine kinase - - - 0.000000000000000000001539 104.0
DYD3_k127_1687082_0 GMC oxidoreductase - - - 1.205e-200 631.0
DYD3_k127_1687082_1 TIGRFAM ribosomal RNA small subunit methyltransferase RsmB K03500 - 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009819 449.0
DYD3_k127_1687082_2 PFAM Xylose isomerase-like TIM barrel K01816 - 5.3.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001565 407.0
DYD3_k127_1687082_3 Sulfatase-modifying factor enzyme 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002255 348.0
DYD3_k127_1687082_4 AhpC/TSA family - - - 0.0000000000000001512 86.0
DYD3_k127_1698851_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1069.0
DYD3_k127_1698851_1 acyl-CoA dehydrogenase K00252 - 1.3.8.6 7.417e-234 726.0
DYD3_k127_1698851_10 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 0.00000000000000000000000000000000000000000000000003289 179.0
DYD3_k127_1698851_11 photosystem II stabilization - - - 0.000000000000000000000000000000000000000000000007507 182.0
DYD3_k127_1698851_12 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.000000000000000000000000000000000000000000000117 171.0
DYD3_k127_1698851_13 CoA binding domain K06929 - - 0.000000000000000000000000000000000000000373 152.0
DYD3_k127_1698851_14 regulation of response to stimulus - - - 0.00000000000000000000001818 115.0
DYD3_k127_1698851_15 domain protein K07004,K18491,K20276 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.00000000005846 74.0
DYD3_k127_1698851_2 FAD dependent oxidoreductase K07137 - - 1.243e-209 663.0
DYD3_k127_1698851_3 MORN repeat variant - - - 2.275e-200 640.0
DYD3_k127_1698851_4 Helix-hairpin-helix motif - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000414 555.0
DYD3_k127_1698851_5 PFAM surface antigen variable number repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000454 404.0
DYD3_k127_1698851_6 Tryptophan 2,3-dioxygenase K00453 - 1.13.11.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008434 388.0
DYD3_k127_1698851_7 TIGRFAM polyphosphate nucleotide phosphotransferase, PPK2 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009424 379.0
DYD3_k127_1698851_8 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006199 323.0
DYD3_k127_1698851_9 translation initiation factor activity K03699 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001294 291.0
DYD3_k127_1700728_0 Beta-L-arabinofuranosidase, GH127 K09955 - - 3.728e-262 821.0
DYD3_k127_1700728_1 MacB-like periplasmic core domain K02004 - - 1.585e-244 780.0
DYD3_k127_1700728_2 - - - - 0.000000000000000000000000000000000000000000004102 166.0
DYD3_k127_1700728_3 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000001515 155.0
DYD3_k127_1700728_4 - - - - 0.0000000000000000000000000000009831 127.0
DYD3_k127_1700728_5 Belongs to the ABC transporter superfamily K02031 - - 0.000000000000000000001058 95.0
DYD3_k127_170483_0 Periplasmic binding protein LacI transcriptional regulator K02529 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007314 408.0
DYD3_k127_170483_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005235 380.0
DYD3_k127_170483_2 Excinuclease ABC subunit B - - - 0.0000000000000000000000000000000000000000000000000000000000000000005513 237.0
DYD3_k127_170483_3 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000000000000000000000000002465 201.0
DYD3_k127_170483_4 Domain of unknown function (DUF4252) - - - 0.000000000000000000000000000000000000000000000000000001821 196.0
DYD3_k127_1712659_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 5.712e-257 796.0
DYD3_k127_1712659_1 Membrane-bound dehydrogenase domain protein - - - 7.071e-231 730.0
DYD3_k127_1712659_2 Thermolysin metallopeptidase, catalytic domain K01400 - 3.4.24.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002413 558.0
DYD3_k127_1714930_0 PFAM peptidase M3A and M3B thimet oligopeptidase F K08602 - - 4.14e-271 844.0
DYD3_k127_1714930_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00821 - 2.6.1.11,2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000044 571.0
DYD3_k127_1714930_2 Histidine phosphatase superfamily (branch 1) - - - 0.000004433 51.0
DYD3_k127_1718358_0 TonB-dependent Receptor Plug Domain - - - 3.405e-219 698.0
DYD3_k127_1718358_1 SusD family K21572 - - 0.0000000001587 63.0
DYD3_k127_1732950_0 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) B subunit K02622 - - 1.826e-310 960.0
DYD3_k127_1732950_1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus K00341 - 1.6.5.3 1.026e-252 794.0
DYD3_k127_1732950_10 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001899 413.0
DYD3_k127_1732950_11 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008773 283.0
DYD3_k127_1732950_12 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.000000000000000000000000000000000000000000000000001809 187.0
DYD3_k127_1732950_13 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.000000000000000000000000000000000000007483 149.0
DYD3_k127_1732950_14 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.000000000000000000000000000000000000422 145.0
DYD3_k127_1732950_15 - - - - 0.000000000000000000000000000000000005464 141.0
DYD3_k127_1732950_16 Transcriptional regulator PadR-like family - - - 0.0000000000000000000000000000000004626 133.0
DYD3_k127_1732950_17 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.00000000000000000000000000000004419 127.0
DYD3_k127_1732950_18 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0050136,GO:0055114,GO:0098796,GO:1902494 1.6.5.3 0.0000000000000000000000000004659 116.0
DYD3_k127_1732950_19 - - - - 0.00000000000000005493 85.0
DYD3_k127_1732950_2 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00174 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0030312,GO:0044464,GO:0050896,GO:0055114,GO:0071944 1.2.7.11,1.2.7.3 2.895e-216 688.0
DYD3_k127_1732950_3 NADH dehydrogenase K00342 - 1.6.5.3 2.009e-204 646.0
DYD3_k127_1732950_4 Belongs to the type II topoisomerase GyrA ParC subunit family K02621 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000982 531.0
DYD3_k127_1732950_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002421 495.0
DYD3_k127_1732950_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822 474.0
DYD3_k127_1732950_7 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005969 467.0
DYD3_k127_1732950_8 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 469.0
DYD3_k127_1732950_9 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004507 412.0
DYD3_k127_1735513_0 MacB-like periplasmic core domain - - - 1.339e-295 928.0
DYD3_k127_1735513_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 2.504e-231 720.0
DYD3_k127_1735513_2 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005995 563.0
DYD3_k127_1735513_3 WG containing repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002001 336.0
DYD3_k127_1735513_4 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001756 305.0
DYD3_k127_1735513_5 PFAM Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002214 249.0
DYD3_k127_1735513_6 - - - - 0.0000000000000000000000000000000000000000000000000000000681 201.0
DYD3_k127_1735513_7 Tetratricopeptide repeat - - - 0.00000000000000000000000001189 113.0
DYD3_k127_174362_0 von Willebrand factor, type A K07114 - - 1.098e-257 812.0
DYD3_k127_174362_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002613 321.0
DYD3_k127_174362_2 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.000000000000000000000000000000000000000000000000000000000000000002246 229.0
DYD3_k127_174362_3 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000000000006082 131.0
DYD3_k127_174362_4 Toxin-antitoxin system, toxin component, Txe YoeB family K19158 - - 0.00000000000000000000001341 101.0
DYD3_k127_174362_5 - - - - 0.0000004685 54.0
DYD3_k127_1757736_0 COG2931 RTX toxins and related Ca2 -binding proteins K11005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000487 409.0
DYD3_k127_1757736_1 PFAM Dienelactone hydrolase family K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009328 291.0
DYD3_k127_1757736_2 Domain of unknown function (DUF4382) - - - 0.000000000000000000000000000000000000000000000000000000000001141 218.0
DYD3_k127_1757736_3 domain protein K20276 - - 0.00000000000000000008641 105.0
DYD3_k127_1757736_4 - - - - 0.000005778 50.0
DYD3_k127_17778_0 COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL CutL homologs K07303 - 1.3.99.16 0.0 1140.0
DYD3_k127_17778_1 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002478 347.0
DYD3_k127_17778_2 Protein of unknown function (DUF2927) - - - 0.00000000000000000000000000000000000000000000000000000000000000000002981 239.0
DYD3_k127_17778_3 - - - - 0.0000000000000000000000000000000000000000000005242 173.0
DYD3_k127_17778_4 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000000000000000000000001742 162.0
DYD3_k127_17778_5 CAAX protease self-immunity K07052 - - 0.000000000000000000000000002194 121.0
DYD3_k127_1779224_0 COG0659 Sulfate permease and related transporters (MFS superfamily) - - - 1.735e-234 746.0
DYD3_k127_1779224_1 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009331 499.0
DYD3_k127_1779224_10 Protein of unknown function (DUF1003) - - - 0.00000000000000000000000000000000000000000000000000000000000000002476 227.0
DYD3_k127_1779224_11 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 - 6.1.1.15 0.0000000000000000000000000000000001894 132.0
DYD3_k127_1779224_12 Hydrogenase 4 membrane K12140 - - 0.000000000000000002687 93.0
DYD3_k127_1779224_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007408 451.0
DYD3_k127_1779224_3 Respiratory-chain NADH dehydrogenase, 49 Kd subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001984 445.0
DYD3_k127_1779224_4 Proton-conducting membrane transporter K12137 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005944 439.0
DYD3_k127_1779224_5 Proton-conducting membrane transporter K12137 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 420.0
DYD3_k127_1779224_6 Glycoside hydrolase family 16 K01216 - 3.2.1.73 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003926 350.0
DYD3_k127_1779224_7 Proton-conducting membrane transporter K12141 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 359.0
DYD3_k127_1779224_8 4 iron, 4 sulfur cluster binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002039 318.0
DYD3_k127_1779224_9 NADH dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003504 291.0
DYD3_k127_1816220_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 6.071e-224 699.0
DYD3_k127_1816220_1 PFAM SPFH domain Band 7 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006032 387.0
DYD3_k127_1816220_2 Acyl CoA binding protein - - - 0.0000000000000000000000005489 105.0
DYD3_k127_1816220_3 PFAM phospholipid glycerol acyltransferase - - - 0.000000001596 60.0
DYD3_k127_1841425_0 Alpha-L-fucosidase K01206 - 3.2.1.51 3.9e-215 674.0
DYD3_k127_1841425_1 cellulose binding - - - 1.549e-208 653.0
DYD3_k127_1841425_2 Methyltransferase K10778 - 2.1.1.63 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001911 447.0
DYD3_k127_1841425_3 beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002232 426.0
DYD3_k127_1841425_4 Domain of Unknown Function (DUF1080) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002242 388.0
DYD3_k127_1841425_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001283 369.0
DYD3_k127_1841425_6 Conserved repeat domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000164 269.0
DYD3_k127_1841425_7 Suppressor of fused protein (SUFU) - - - 0.0000000000000000000000000000000000000000000000000000000000006908 217.0
DYD3_k127_1841425_8 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin - - - 0.00000000000000000000000000000000008583 135.0
DYD3_k127_1871446_0 PFAM Amidohydrolase family K01468 - 3.5.2.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001803 564.0
DYD3_k127_1871446_2 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.000000000000000000000000000000000000000000000000000009579 194.0
DYD3_k127_1871446_3 Peptidase S16, lon domain protein K01338,K07157 - 3.4.21.53 0.0000000000000000000000000001649 117.0
DYD3_k127_1872498_0 Peptidase family C25 - - - 9.464e-219 704.0
DYD3_k127_1872498_1 PFAM PspC domain K03973 - - 3.807e-214 690.0
DYD3_k127_1872498_2 Phosphate starvation-inducible protein PhoH K06217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 467.0
DYD3_k127_1872498_3 S-adenosyl-l-methionine hydroxide adenosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003293 315.0
DYD3_k127_1872498_4 Transcriptional regulator K10947 - - 0.00000000000000000000000000000000000000000000000001361 181.0
DYD3_k127_1872498_5 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000008557 78.0
DYD3_k127_1877303_0 PFAM Sodium sulfate symporter transmembrane region K14445 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001929 493.0
DYD3_k127_1877303_1 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001164 318.0
DYD3_k127_1877303_2 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000000000000000000000000005813 209.0
DYD3_k127_1877303_3 Gluconate 2-dehydrogenase subunit 3 - - - 0.0000000000000000000000000000000000000001197 156.0
DYD3_k127_1877303_4 - - - - 0.00000000000000000000000003766 115.0
DYD3_k127_1877303_5 PFAM RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) - - - 0.000000000000000000000007059 103.0
DYD3_k127_187751_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00819 - 2.6.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000092 617.0
DYD3_k127_187751_1 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate K07106 - 4.2.1.126 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003048 353.0
DYD3_k127_187751_2 Domain of Unknown Function (DUF1080) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003713 320.0
DYD3_k127_187751_3 N-acetylglucosamine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007019 280.0
DYD3_k127_187751_4 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001003 254.0
DYD3_k127_187751_5 Required for chromosome condensation and partitioning - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002177 267.0
DYD3_k127_187751_6 Chaperonin 10 Kd subunit - - - 0.00000000000000000000000000000000000000000000000000000000008883 205.0
DYD3_k127_187751_7 PFAM SprT-like family - - - 0.000000000000000000000000000000000000000000002318 171.0
DYD3_k127_187751_8 - - - - 0.0000000000000003206 80.0
DYD3_k127_187751_9 Signal peptide protein - - - 0.0000005871 56.0
DYD3_k127_1878899_0 PFAM Phosphatidic acid phosphatase type 2 haloperoxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005323 250.0
DYD3_k127_1878899_1 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000000000000000000000000000000000000000001631 207.0
DYD3_k127_1878899_2 Prokaryotic N-terminal methylation motif K02456,K02457,K02458,K02459,K02655,K10926 - - 0.000000000000000000000000000000000000000000000000002304 191.0
DYD3_k127_1878899_3 PEGA domain - - - 0.0000000000000000000000000000005833 127.0
DYD3_k127_1878899_5 metallopeptidase activity - - - 0.00000001822 63.0
DYD3_k127_1878899_6 Domain of unknown function (DUF4160) - - - 0.0000004655 57.0
DYD3_k127_1895686_0 ABC-2 type transporter K21397 - - 1.104e-296 919.0
DYD3_k127_1895686_1 Domain of unknown function (DUF1987) - - - 0.000000000000000000000000000000000000000000000000000000000000000006214 226.0
DYD3_k127_1895686_2 - - - - 0.000000000000000000000517 96.0
DYD3_k127_1896559_0 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 2.612e-196 618.0
DYD3_k127_1896559_1 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008523 550.0
DYD3_k127_1896559_2 PFAM Bacterial membrane protein YfhO - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 476.0
DYD3_k127_1896559_3 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001275 345.0
DYD3_k127_1896559_4 Endoribonuclease L-PSP - - - 0.00000000000000000000000000000000000000000000004701 171.0
DYD3_k127_1896559_5 Domain of unknown function (DUF1905) - - - 0.000000000000000000000000000000000002812 142.0
DYD3_k127_1902422_0 Penicillin binding protein transpeptidase K05366 - 2.4.1.129,3.4.16.4 2.977e-319 994.0
DYD3_k127_1902422_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 3.514e-228 721.0
DYD3_k127_1902422_10 COGs COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000001033 201.0
DYD3_k127_1902422_2 Tetratricopeptide repeats - - - 3.145e-219 709.0
DYD3_k127_1902422_3 Evidence 4 Homologs of previously reported genes of - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 460.0
DYD3_k127_1902422_4 Uncharacterised 5xTM membrane BCR, YitT family COG1284 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006665 360.0
DYD3_k127_1902422_5 Glycosyl transferase 4-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005701 342.0
DYD3_k127_1902422_6 Domain of Unknown Function (DUF1080) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 307.0
DYD3_k127_1902422_7 Glutamine amidotransferase class-I - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 303.0
DYD3_k127_1902422_8 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002898 304.0
DYD3_k127_1902422_9 Caspase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007547 297.0
DYD3_k127_1919559_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 2.622e-310 956.0
DYD3_k127_1919559_1 TPM domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005678 317.0
DYD3_k127_1919559_2 RF-1 domain K15034 - - 0.0000000000000000000000000405 112.0
DYD3_k127_1927615_0 Glutamine amidotransferase domain K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000415 201.0
DYD3_k127_1927615_1 PFAM LmbE family protein - - - 0.000000000000000000000000000000000002907 145.0
DYD3_k127_1927615_2 PFAM Sulfotransferase domain - - - 0.000000000000000000000000000000000106 141.0
DYD3_k127_1927615_3 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.0000000000000000000000000000009839 127.0
DYD3_k127_1927615_6 HNH endonuclease - - - 0.00003864 50.0
DYD3_k127_1933727_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002607 411.0
DYD3_k127_1933727_1 Beta-eliminating lyase K01620 - 4.1.2.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002729 409.0
DYD3_k127_1933727_2 PFAM peptidase M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003167 282.0
DYD3_k127_1933727_3 Eukaryotic translation initiation factor eIF2A - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003617 258.0
DYD3_k127_1933727_4 GHKL domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002529 261.0
DYD3_k127_1933727_5 - - - - 0.0000000002118 67.0
DYD3_k127_1959821_0 SnoaL-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000283 477.0
DYD3_k127_1959821_1 AraC family transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005241 338.0
DYD3_k127_2042717_0 PFAM Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007214 606.0
DYD3_k127_2042717_1 PFAM (2R)-phospho-3-sulfolactate synthase ComA K08097 - 4.4.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 440.0
DYD3_k127_2042717_2 PFAM NAD dependent epimerase dehydratase family K00091 - 1.1.1.219 0.0000000000000000000000000000000000000000000000000000000000000000000000001438 258.0
DYD3_k127_2042717_3 capsular polysaccharide biosynthesis protein K01104 - 3.1.3.48 0.00000000000000000000000000000000000000000000000000000000000000001538 231.0
DYD3_k127_2042717_4 Domain of unknown function (DUF368) K08974 - - 0.0000000000000000000000000000000000008591 145.0
DYD3_k127_2042717_5 TIGRFAM capsular exopolysaccharide family - - - 0.00000000006405 64.0
DYD3_k127_20600_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004711 465.0
DYD3_k127_20600_1 BlaR1 peptidase M56 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009414 311.0
DYD3_k127_20600_2 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000005238 252.0
DYD3_k127_20600_3 Penicillinase repressor - - - 0.000000000000000000000000000000000000000000000001219 176.0
DYD3_k127_20600_4 Sugar efflux transporter for intercellular exchange K15383 - - 0.0000000000000000000001054 99.0
DYD3_k127_2073015_0 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003644 520.0
DYD3_k127_2073015_1 PFAM Pregnancy-associated plasma protein-A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002598 387.0
DYD3_k127_2073015_2 COGs COG3279 Response regulator of the LytR AlgR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000933 244.0
DYD3_k127_2073015_3 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000000000000000001961 184.0
DYD3_k127_2073015_4 NifU domain protein - - - 0.0000000000000000000000000005751 115.0
DYD3_k127_2073015_5 Binds directly to 16S ribosomal RNA K02968 - - 0.000000000000000000000000116 110.0
DYD3_k127_2073015_6 S1 P1 nuclease - - - 0.0000000000000000007824 88.0
DYD3_k127_2079102_0 PFAM MgsA AAA ATPase C terminal K07478 - - 7.003e-211 662.0
DYD3_k127_2079102_1 Dienelactone hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003974 606.0
DYD3_k127_2079102_10 Helix-turn-helix domain - - - 0.00000000000000000000000000000000003009 139.0
DYD3_k127_2079102_11 Outer membrane protein beta-barrel domain - - - 0.000000000000000007843 91.0
DYD3_k127_2079102_12 COGs COG0659 Sulfate permease and related transporter (MFS superfamily) K01673 - 4.2.1.1 0.000003296 50.0
DYD3_k127_2079102_2 Homogentisate 12-dioxygenase K00451 - 1.13.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 534.0
DYD3_k127_2079102_3 Transporter K03281 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006614 499.0
DYD3_k127_2079102_4 SMART glycoside hydrolase family 10 K01181 - 3.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002882 465.0
DYD3_k127_2079102_5 Threonine aldolase K01620 - 4.1.2.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000009409 260.0
DYD3_k127_2079102_6 Protein of unknown function (DUF3667) - - - 0.0000000000000000000000000000000000000000000000203 184.0
DYD3_k127_2079102_7 Cupin domain K14977 - 3.5.3.26 0.0000000000000000000000000000000000000000000005925 188.0
DYD3_k127_2079102_8 Threonine aldolase K01620 - 4.1.2.48 0.00000000000000000000000000000000000000000001747 165.0
DYD3_k127_2079102_9 - - - - 0.0000000000000000000000000000000000000000008407 160.0
DYD3_k127_2083272_0 gtp-binding protein typa K06207 - - 1.872e-285 888.0
DYD3_k127_2083272_1 Alpha-L-arabinofuranosidase domain protein K01209 - 3.2.1.55 3.917e-263 817.0
DYD3_k127_2083272_10 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000000000000000000000011 200.0
DYD3_k127_2083272_11 HEAT repeats - - - 0.00000000000000000000000000000000000000000000000000001372 198.0
DYD3_k127_2083272_14 COG NOG26965 non supervised orthologous group - - - 0.0000000000000002534 87.0
DYD3_k127_2083272_15 OmpW family - - - 0.000000000000001524 84.0
DYD3_k127_2083272_16 positive regulation of catalytic activity in other organism involved in symbiotic interaction K09527,K19199 - 2.1.1.43 0.00008898 53.0
DYD3_k127_2083272_2 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 1.027e-248 777.0
DYD3_k127_2083272_3 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 9.164e-247 771.0
DYD3_k127_2083272_4 PFAM sulfatase - - - 1.662e-227 721.0
DYD3_k127_2083272_5 dienelactone hydrolase K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004787 519.0
DYD3_k127_2083272_6 Inositol oxygenase K00469 - 1.13.99.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002534 505.0
DYD3_k127_2083272_7 PFAM Receptor family ligand binding region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 337.0
DYD3_k127_2083272_8 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000001989 254.0
DYD3_k127_2083272_9 Nucleotidyl transferase AbiEii toxin, Type IV TA system - - - 0.0000000000000000000000000000000000000000000000000000000000000008749 224.0
DYD3_k127_2091361_0 Protein of unknown function (DUF3109) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001293 295.0
DYD3_k127_2091361_1 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005738 267.0
DYD3_k127_2091361_2 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000005525 236.0
DYD3_k127_2091361_3 CHY zinc finger - - - 0.0000000000000000000000000000000000000000002126 160.0
DYD3_k127_2091361_4 lactoylglutathione lyase activity - - - 0.00000000000000000000000769 104.0
DYD3_k127_2125514_0 Nitrous oxide reductase K00376 - 1.7.2.4 0.0 1058.0
DYD3_k127_2125514_1 PFAM cytochrome c - - - 0.000000000000000000000000000000000000000000000000000001431 196.0
DYD3_k127_2125514_2 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. - - - 0.000000000000000000000000000000000000000000000000006277 186.0
DYD3_k127_2144244_0 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002994 496.0
DYD3_k127_2144244_1 DNA polymerase III K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 351.0
DYD3_k127_2144244_2 Mur ligase middle domain K01924,K02558 - 6.3.2.45,6.3.2.8 0.0000000000000000000000000000000000000000000008723 173.0
DYD3_k127_2144244_3 Domain of unknown function (DUF1508) K09946 - - 0.0000000000000000000000004827 108.0
DYD3_k127_2144244_4 COGs COG4299 conserved - - - 0.00000000000005627 72.0
DYD3_k127_2144244_5 - - - - 0.000001086 50.0
DYD3_k127_2149924_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000359 506.0
DYD3_k127_2149924_1 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002659 487.0
DYD3_k127_2149924_2 Belongs to the beta-ketoacyl-ACP synthases family K00647 - 2.3.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009329 411.0
DYD3_k127_2149924_3 ABC-2 type transporter K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006535 332.0
DYD3_k127_2149924_4 Beta-ketoacyl synthase, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004561 268.0
DYD3_k127_2149924_5 ATPases associated with a variety of cellular activities K01990 - - 0.000000000000000000000000000000000000000003742 158.0
DYD3_k127_2149924_6 Phosphopantetheine attachment site K02078 - - 0.0000000000000000000000000234 110.0
DYD3_k127_2162117_0 Outer membrane protein beta-barrel family - - - 2.025e-254 816.0
DYD3_k127_2162117_1 COGs COG1668 ABC-type Na efflux pump permease component K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003142 475.0
DYD3_k127_2162117_2 PFAM ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002438 388.0
DYD3_k127_2162117_3 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003656 344.0
DYD3_k127_2162117_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002219 325.0
DYD3_k127_2162117_5 Two component transcriptional regulator, winged helix family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 298.0
DYD3_k127_2162117_6 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007507 288.0
DYD3_k127_2162117_7 Protein of unknown function (Porph_ging) - - - 0.0000000000000000000000000000000000000000000000000000000000000004294 228.0
DYD3_k127_2163910_0 Polysaccharide biosynthesis protein - - - 3.967e-210 670.0
DYD3_k127_2163910_1 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000078 466.0
DYD3_k127_2163910_10 Outer membrane protein beta-barrel domain - - - 0.0000000000000000000000000000000000000000000000002891 184.0
DYD3_k127_2163910_11 long-chain fatty acid transport protein - - - 0.0000000000000000000000000000000000000000006578 165.0
DYD3_k127_2163910_2 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004908 392.0
DYD3_k127_2163910_3 Permease YjgP YjgQ family K11720 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003368 387.0
DYD3_k127_2163910_4 ABC-type transport system involved in lipoprotein release permease component K09808 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005374 389.0
DYD3_k127_2163910_5 PFAM Glycosyl transferase family 2 K00721 - 2.4.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 342.0
DYD3_k127_2163910_6 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003033 307.0
DYD3_k127_2163910_7 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000467 306.0
DYD3_k127_2163910_8 PFAM EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004121 290.0
DYD3_k127_2163910_9 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.000000000000000000000000000000000000000000000000000000000003795 212.0
DYD3_k127_21671_0 PFAM YeeE YedE family (DUF395) K07112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009748 284.0
DYD3_k127_21671_1 PFAM YeeE YedE family (DUF395) K07112 - - 0.000000000000000000000000000000000000000000000000000000000000000000001342 239.0
DYD3_k127_21671_2 binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000001064 207.0
DYD3_k127_21671_3 Binds together with S18 to 16S ribosomal RNA K02990 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000000005641 177.0
DYD3_k127_21671_4 - - - - 0.00000000000000000000000000000000000000000002395 164.0
DYD3_k127_21671_5 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000009951 137.0
DYD3_k127_2181850_0 PFAM TonB-dependent Receptor Plug - - - 0.0 1190.0
DYD3_k127_2181850_1 Starch-binding associating with outer membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005993 585.0
DYD3_k127_2181850_2 Psort location CytoplasmicMembrane, score 10.00 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001835 392.0
DYD3_k127_2181850_3 Metalloenzyme superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008788 356.0
DYD3_k127_2181850_4 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 355.0
DYD3_k127_2181850_5 HAD-hyrolase-like - - - 0.000000000000001105 79.0
DYD3_k127_2195848_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 1.634e-228 713.0
DYD3_k127_2195848_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001782 541.0
DYD3_k127_2195848_2 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 532.0
DYD3_k127_2195848_3 H( )-stimulated, divalent metal cation uptake system K03322 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002984 425.0
DYD3_k127_2195848_4 PFAM SPFH domain Band 7 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005851 347.0
DYD3_k127_2195848_5 Acyl CoA binding protein - - - 0.000000000000001256 78.0
DYD3_k127_2221490_0 SUPERFAMILY SSF53098, Polynucleotidyl transferase, Ribonuclease H fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005195 590.0
DYD3_k127_2221490_1 OmpA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000546 536.0
DYD3_k127_2221490_2 - - - - 0.0000000000000000000000000000000000000000000000000000000009581 226.0
DYD3_k127_2234042_0 Belongs to the GPI family K01810 - 5.3.1.9 2.056e-254 794.0
DYD3_k127_2234042_1 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K00850 - 2.7.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002456 443.0
DYD3_k127_2250633_0 FtsX-like permease family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003505 528.0
DYD3_k127_2250633_1 Carbohydrate esterase, sialic acid-specific acetylesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001559 334.0
DYD3_k127_2250633_2 Restriction endonuclease K07448 - - 0.0000000000000000009414 90.0
DYD3_k127_2298097_0 Amidase K01426 - 3.5.1.4 6.068e-219 691.0
DYD3_k127_2298097_1 SPFH domain-Band 7 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 489.0
DYD3_k127_2298097_10 B-1 B cell differentiation - - - 0.000000000000000000000000000000000000000000000000000000000003479 228.0
DYD3_k127_2298097_11 Protein involved in meta-pathway of phenol degradation - - - 0.0000000000000000000000000000000000000000000002204 174.0
DYD3_k127_2298097_12 - - - - 0.000000000000000000000000005136 127.0
DYD3_k127_2298097_13 - - - - 0.000000000000000000000007145 106.0
DYD3_k127_2298097_14 - - - - 0.00000009391 60.0
DYD3_k127_2298097_2 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005357 457.0
DYD3_k127_2298097_3 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000234 422.0
DYD3_k127_2298097_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004876 356.0
DYD3_k127_2298097_5 TIGRFAM succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003183 348.0
DYD3_k127_2298097_6 peptidase S1 and S6 chymotrypsin Hap - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001349 258.0
DYD3_k127_2298097_7 Belongs to the sigma-70 factor family - - - 0.000000000000000000000000000000000000000000000000000000000000000001888 231.0
DYD3_k127_2298097_8 - - - - 0.00000000000000000000000000000000000000000000000000000000000000001088 229.0
DYD3_k127_2298097_9 LPP20 lipoprotein - - - 0.00000000000000000000000000000000000000000000000000000000000000002642 240.0
DYD3_k127_2325338_0 Glycosyl transferases group 1 - - - 1.486e-253 805.0
DYD3_k127_2325338_1 COGs COG2152 glycosylase K20885 - 2.4.1.339,2.4.1.340 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004112 453.0
DYD3_k127_2325338_10 Cupin domain protein - - - 0.00000000000000000004572 92.0
DYD3_k127_2325338_11 - - - - 0.00000000000000001032 88.0
DYD3_k127_2325338_12 - - - - 0.00000000000004836 73.0
DYD3_k127_2325338_13 - - - - 0.00000008713 57.0
DYD3_k127_2325338_14 CsbD-like - - - 0.0000002327 52.0
DYD3_k127_2325338_15 - - - - 0.00001248 50.0
DYD3_k127_2325338_2 Protein of unknown function (DUF3494) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003506 416.0
DYD3_k127_2325338_3 fatty acid desaturase K00508 - 1.14.19.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000194 405.0
DYD3_k127_2325338_4 PFAM Bacterial regulatory helix-turn-helix proteins, AraC family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007165 290.0
DYD3_k127_2325338_5 Endonuclease Exonuclease Phosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000009925 233.0
DYD3_k127_2325338_6 YceI-like domain - - - 0.0000000000000000000000000000000000000000000000000000000001165 207.0
DYD3_k127_2325338_8 Ndr family - - - 0.000000000000000000000000000000000000000000000001669 179.0
DYD3_k127_2325338_9 Ndr family - - - 0.0000000000000000000000004689 107.0
DYD3_k127_2325961_0 FtsX-like permease family K02004 - - 4.718e-311 976.0
DYD3_k127_2325961_1 MacB-like periplasmic core domain - - - 3.909e-306 960.0
DYD3_k127_2325961_2 MacB-like periplasmic core domain K02004 - - 6.271e-305 954.0
DYD3_k127_2325961_3 FtsX-like permease family - - - 3.921e-251 801.0
DYD3_k127_2325961_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002824 407.0
DYD3_k127_2325961_5 peptidase activity K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002857 386.0
DYD3_k127_2325961_6 - - - - 0.000000000002146 70.0
DYD3_k127_2334821_0 magnesium chelatase K07391 - - 2.417e-269 835.0
DYD3_k127_2334821_1 ABC transporter transmembrane region K06147,K11085 - - 1.071e-225 714.0
DYD3_k127_2334821_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003525 615.0
DYD3_k127_2334821_3 Sugar nucleotidyl transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003184 496.0
DYD3_k127_2334821_4 beta-glucosidase K05350 - 3.2.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 407.0
DYD3_k127_2334821_5 Ribosomal protein L31 K02909 - - 0.000000000000000000000000000000001625 131.0
DYD3_k127_2334821_6 DNA polymerase III, delta' subunit K02341 - 2.7.7.7 0.0000000003412 61.0
DYD3_k127_2347143_0 PD-(D/E)XK nuclease superfamily - - - 1.074e-212 693.0
DYD3_k127_2347143_1 Belongs to the helicase family. UvrD subfamily - - - 0.0000000000000000000537 93.0
DYD3_k127_2347143_2 - - - - 0.00000009651 59.0
DYD3_k127_2355842_0 Phytanoyl-CoA dioxygenase (PhyH) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005624 496.0
DYD3_k127_2355842_1 alcohol dehydrogenase K13979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000098 463.0
DYD3_k127_2355842_2 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003507 259.0
DYD3_k127_2418739_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 8.792e-309 953.0
DYD3_k127_2418739_1 Dipeptidyl peptidase IV (DPP IV) N-terminal region - - - 2.933e-306 957.0
DYD3_k127_2418739_10 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 324.0
DYD3_k127_2418739_11 PFAM WD domain, G-beta repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 325.0
DYD3_k127_2418739_12 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001995 306.0
DYD3_k127_2418739_13 Mammalian cell entry related domain protein K02067 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007009 277.0
DYD3_k127_2418739_14 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006467 276.0
DYD3_k127_2418739_15 TIGRFAM DivIVA domain K04074 - - 0.0000000000000000000000000000000000000000000000000000000000000006685 226.0
DYD3_k127_2418739_16 PFAM peptidase C14 caspase catalytic subunit p20 - - - 0.000000000000000000000000000000000000000000000000000000003114 220.0
DYD3_k127_2418739_17 EthD domain - - - 0.00000000000000000000000000000000000000000004883 166.0
DYD3_k127_2418739_18 Belongs to the P-Pant transferase superfamily - - - 0.000000000000000000000000000000000000000009527 161.0
DYD3_k127_2418739_19 AhpC/TSA family - - - 0.0000000000000000000000000000000000002778 147.0
DYD3_k127_2418739_2 Organic solvent tolerance protein OstA - - - 8.068e-296 937.0
DYD3_k127_2418739_20 Domain of unknown function (DUF3127) - - - 0.0000000000000000000000000000000000914 136.0
DYD3_k127_2418739_21 - - - - 0.0000000000000000000000000000000008357 137.0
DYD3_k127_2418739_22 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.000000000000000000000000000000698 124.0
DYD3_k127_2418739_23 Domain of unknown function (DUF4440) - - - 0.00000000000000000000000000001693 122.0
DYD3_k127_2418739_24 Protein of unknown function DUF86 - - - 0.000000000000000000000000004259 113.0
DYD3_k127_2418739_25 nucleotidyltransferase activity K07075 - - 0.0000000000000000001232 93.0
DYD3_k127_2418739_26 Protein of unknown function (DUF4230) - - - 0.000000000000000000459 95.0
DYD3_k127_2418739_27 Domain of unknown function (DU1801) - - - 0.0000000000009798 74.0
DYD3_k127_2418739_28 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000002702 59.0
DYD3_k127_2418739_3 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta) - - - 1.44e-285 884.0
DYD3_k127_2418739_4 CHAT domain - - - 1.968e-210 676.0
DYD3_k127_2418739_5 Leucine-rich repeat (LRR) protein K13730 - - 6.939e-206 667.0
DYD3_k127_2418739_6 transmembrane transport - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008353 504.0
DYD3_k127_2418739_7 Redoxin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001422 467.0
DYD3_k127_2418739_8 Transglutaminase-like superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 407.0
DYD3_k127_2418739_9 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009245 334.0
DYD3_k127_2443595_0 ABC transporter - - - 6.752e-305 941.0
DYD3_k127_2443595_1 Protein of unknown function (DUF2723) - - - 6.167e-302 950.0
DYD3_k127_2443595_10 Belongs to the enoyl-CoA hydratase isomerase family K13766 - 4.2.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003033 303.0
DYD3_k127_2443595_11 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0050518,GO:0070567 2.7.7.60 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003107 299.0
DYD3_k127_2443595_12 phosphotransferase enzyme family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000913 290.0
DYD3_k127_2443595_13 Catalyzes the oxidative ring opening of 3- hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate K00452 - 1.13.11.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001708 276.0
DYD3_k127_2443595_14 OstA-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002354 261.0
DYD3_k127_2443595_15 arginyltransferase activity K21420 - 2.3.2.29 0.000000000000000000000000000000000000000000000003963 181.0
DYD3_k127_2443595_16 DinB superfamily - - - 0.000000000000000000000000000000000000000000004654 169.0
DYD3_k127_2443595_17 Protein of unknown function (DUF2795) - - - 0.0000000000000000000000000000000000000000008732 156.0
DYD3_k127_2443595_18 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000000000000009026 147.0
DYD3_k127_2443595_19 YCII-related domain - - - 0.000000000000000000000000004452 113.0
DYD3_k127_2443595_2 Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively K01556 - 3.7.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 556.0
DYD3_k127_2443595_20 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.000000000000000000000000007197 113.0
DYD3_k127_2443595_21 OmpA family - - - 0.00000000000000000000002739 109.0
DYD3_k127_2443595_22 Protein of unknown function (DUF2281) - - - 0.0000001449 55.0
DYD3_k127_2443595_23 DNA helicase K03657 - 3.6.4.12 0.0000695 46.0
DYD3_k127_2443595_3 Major Facilitator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004208 497.0
DYD3_k127_2443595_4 Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 469.0
DYD3_k127_2443595_5 Bacterial extracellular solute-binding proteins, family 3 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001874 373.0
DYD3_k127_2443595_6 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000303 377.0
DYD3_k127_2443595_7 SMP-30/Gluconolaconase/LRE-like region K01053 - 3.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008293 361.0
DYD3_k127_2443595_8 Nucleotidyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002955 344.0
DYD3_k127_2443595_9 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008156 343.0
DYD3_k127_2470217_0 Deoxyhypusine synthase K00809 - 2.5.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002472 569.0
DYD3_k127_2470217_1 Motility related/secretion protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006205 370.0
DYD3_k127_2470217_2 S1 P1 nuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000849 300.0
DYD3_k127_2470217_3 Transport and Golgi organisation 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000002036 241.0
DYD3_k127_2513117_0 Peptidase family M1 domain K01992 - - 0.0 1247.0
DYD3_k127_2513117_1 TIGRFAM Acidobacterial duplicated orphan permease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 617.0
DYD3_k127_2513117_10 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000005187 237.0
DYD3_k127_2513117_11 ATPase kinase involved in NAD metabolism - - - 0.000000000000000000000000000000000000000000000000000000005815 203.0
DYD3_k127_2513117_12 Sigma-70 region 2 - - - 0.0000000000000000000000000000000000000000000000000002315 192.0
DYD3_k127_2513117_13 PFAM Pterin 4 alpha carbinolamine dehydratase K01724 - 4.2.1.96 0.000000000000000000000000000000002506 129.0
DYD3_k127_2513117_14 Protein of unknown function (DUF493) - - - 0.000000000000000000005776 96.0
DYD3_k127_2513117_15 negative regulation of transcription, DNA-templated - - - 0.00000000000000006739 81.0
DYD3_k127_2513117_16 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.00000000000001116 83.0
DYD3_k127_2513117_2 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001688 610.0
DYD3_k127_2513117_3 Fatty acid desaturase K00507 - 1.14.19.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003493 520.0
DYD3_k127_2513117_4 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007604 492.0
DYD3_k127_2513117_5 ABC-type multidrug transport system ATPase component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002326 425.0
DYD3_k127_2513117_6 peptidylprolyl isomerase K01802,K03770 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 394.0
DYD3_k127_2513117_7 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000629 330.0
DYD3_k127_2513117_8 COG1653 ABC-type sugar transport system, periplasmic component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 313.0
DYD3_k127_2513117_9 Inositol monophosphatase K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000304 310.0
DYD3_k127_2534258_0 Toxic component of a toxin-antitoxin (TA) module K07171 - - 0.0000000000000000000000000000000000000000009522 158.0
DYD3_k127_2534258_1 PFAM Pregnancy-associated plasma protein-A - - - 0.000000000000000000000000000000000000000002331 175.0
DYD3_k127_2534258_2 PFAM translation initiation factor SUI1 K03113 - - 0.0000000000000000000000000000000000000001091 153.0
DYD3_k127_2534258_3 Transcriptional regulator - - - 0.0000000000000000000000000002147 116.0
DYD3_k127_2534258_4 CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer K09952 - - 0.000000000000000000000004617 107.0
DYD3_k127_2534258_5 Inner membrane protein CreD K06143 - - 0.00001401 47.0
DYD3_k127_2538605_0 Peptidase S9 - GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008239,GO:0009056,GO:0009987,GO:0016787,GO:0019538,GO:0033218,GO:0034641,GO:0042277,GO:0042597,GO:0042802,GO:0042803,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044464,GO:0046983,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 2.001e-289 901.0
DYD3_k127_2538605_1 GH3 auxin-responsive promoter - - - 7.453e-251 782.0
DYD3_k127_2538605_2 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 286.0
DYD3_k127_2538605_3 PFAM Lysine exporter protein (LYSE YGGA) - - - 0.0000000000000000000000000000000000000000000001379 175.0
DYD3_k127_2538605_4 Protein of unknown function (DUF1573) - - - 0.00000000000000000000000000000002458 130.0
DYD3_k127_2538605_5 small membrane protein - - - 0.0000000000000000000000000005756 117.0
DYD3_k127_2538605_6 PFAM Uncharacterised conserved protein UCP016719 - - - 0.000000000000001213 79.0
DYD3_k127_2538605_7 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.00005505 53.0
DYD3_k127_2559440_0 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009022 625.0
DYD3_k127_2559440_1 PFAM aminotransferase class V - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002026 350.0
DYD3_k127_2559440_2 - - - - 0.0000007441 63.0
DYD3_k127_2562118_0 ABC transporter transmembrane region K11085 - - 2.759e-241 758.0
DYD3_k127_2562118_1 Transport of potassium into the cell K03549 - - 1.952e-218 696.0
DYD3_k127_2562118_10 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001342 337.0
DYD3_k127_2562118_11 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004748 329.0
DYD3_k127_2562118_12 Acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001722 324.0
DYD3_k127_2562118_13 NUDIX domain K01515 - 3.6.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 290.0
DYD3_k127_2562118_14 TIGRFAM phosphoesterase, MJ0936 family K07095 - - 0.0000000000000000000000000000000000000000000000000000000000000000007044 231.0
DYD3_k127_2562118_15 Protein of unknown function, DUF481 - - - 0.0000000000000000000000000000000000000000000000001911 186.0
DYD3_k127_2562118_16 23S rRNA-intervening sequence protein - - - 0.00000000000000000000000000000000000000009141 154.0
DYD3_k127_2562118_2 argininosuccinate lyase K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 2.809e-199 630.0
DYD3_k127_2562118_3 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 599.0
DYD3_k127_2562118_4 Belongs to the agmatine deiminase family K10536 - 3.5.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005732 563.0
DYD3_k127_2562118_5 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01431,K12251 - 3.5.1.53,3.5.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001945 508.0
DYD3_k127_2562118_6 Aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005174 482.0
DYD3_k127_2562118_7 Belongs to the ATCase OTCase family K09065,K13043 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.11,2.1.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005762 478.0
DYD3_k127_2562118_8 PFAM Peptidase family M20 M25 M40 K01438 - 3.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007601 458.0
DYD3_k127_2562118_9 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005628 451.0
DYD3_k127_2569211_0 TIGRFAM Acidobacterial duplicated orphan permease K02004 - - 7.115e-226 724.0
DYD3_k127_2569211_1 exonuclease of the beta-lactamase fold involved in RNA processing K07576 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005371 548.0
DYD3_k127_2569211_2 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002671 471.0
DYD3_k127_2569211_3 KduI/IolB family K01815 - 5.3.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007696 362.0
DYD3_k127_2569211_4 major facilitator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001575 275.0
DYD3_k127_2569211_5 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000009555 133.0
DYD3_k127_2590214_0 Tricorn protease homolog K08676 - - 0.0 1410.0
DYD3_k127_2590214_1 lysine biosynthetic process via aminoadipic acid - - - 7.565e-314 975.0
DYD3_k127_2590214_2 FtsX-like permease family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 611.0
DYD3_k127_2590214_3 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006214 510.0
DYD3_k127_2590214_4 Peptidase, M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005168 250.0
DYD3_k127_2590214_5 - - - - 0.00000000000000000000000000000000000000000000000000000008285 212.0
DYD3_k127_2590214_6 Outer membrane protein beta-barrel domain K07275 - - 0.00000004872 62.0
DYD3_k127_2598825_0 Patatin-like phospholipase K07001 - - 2.204e-264 835.0
DYD3_k127_2598825_1 PFAM Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008576 240.0
DYD3_k127_2598825_2 fibronectin type III domain protein - - - 0.000000009119 59.0
DYD3_k127_2609575_0 oxidoreductase activity K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 489.0
DYD3_k127_2609575_1 Peptidase C14 caspase catalytic subunit p20 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000977 389.0
DYD3_k127_2609575_3 Peptidase C14 caspase catalytic subunit p20 - - - 0.000000000000000000000000000000000002156 141.0
DYD3_k127_2609575_4 23S rRNA-intervening sequence protein - - - 0.000000000000000000000000000000001719 132.0
DYD3_k127_2609575_5 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 GO:0003674,GO:0003824,GO:0004812,GO:0004815,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006422,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.12 0.0000000000000000000001147 101.0
DYD3_k127_2609575_7 acetyl-CoA hydrolase - - - 0.0000000001699 62.0
DYD3_k127_26257_0 PFAM Glycoside hydrolase, family 29 K01206 - 3.2.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001442 558.0
DYD3_k127_26257_1 Metallo-beta-lactamase superfamily K17837 - 3.5.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004977 359.0
DYD3_k127_26257_2 cellulose binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007277 354.0
DYD3_k127_26257_3 and related - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006349 313.0
DYD3_k127_26257_4 Redoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005285 254.0
DYD3_k127_26257_5 Domain of unknown function (DUF3817) - - - 0.00000000000000000000000004898 111.0
DYD3_k127_26257_6 protein, Hemolysin III K11068 - - 0.0000000000000000000000006451 109.0
DYD3_k127_2644862_0 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000978 309.0
DYD3_k127_2644862_1 PFAM RibD C-terminal domain K00287 - 1.5.1.3 0.000000000000000000000000008467 110.0
DYD3_k127_2646870_0 DNA (cytosine-5-)-methyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000008638 210.0
DYD3_k127_2646870_1 COG0464 ATPases of the AAA class - - - 0.00000000000000000000000000001132 129.0
DYD3_k127_2646870_2 YqaJ-like viral recombinase domain - - - 0.000000002592 67.0
DYD3_k127_2674005_0 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002209 308.0
DYD3_k127_2674005_1 GHKL domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 299.0
DYD3_k127_2674005_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000002235 150.0
DYD3_k127_2674005_3 His Kinase A (phosphoacceptor) domain K07636 - 2.7.13.3 0.000000000000000000000001732 105.0
DYD3_k127_2674005_4 Beta-galactosidase jelly roll domain - - - 0.00000000000000001431 85.0
DYD3_k127_2680571_0 Pregnancy-associated plasma protein-A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004187 495.0
DYD3_k127_2680571_1 Pfam:SusD K21572 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004927 377.0
DYD3_k127_2680571_2 - - - - 0.0000000000000000000000000000000000000000000000000000000003101 211.0
DYD3_k127_2680571_3 - - - - 0.00000000000000000000004658 104.0
DYD3_k127_2710510_0 PFAM TonB-dependent Receptor K16091 - - 2.385e-264 830.0
DYD3_k127_2710510_1 PAP2 superfamily - - - 3.624e-238 745.0
DYD3_k127_2710510_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 368.0
DYD3_k127_2710510_3 - - - - 0.000000000000000000000000001031 118.0
DYD3_k127_2713523_0 TIGRFAM cysteine desulfurase family protein, VC1184 subfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003375 517.0
DYD3_k127_2713523_1 PDZ domain (Also known as DHR or GLGF) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003639 502.0
DYD3_k127_2713523_2 Acyl carrier protein phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000003369 216.0
DYD3_k127_2713523_3 - - - - 0.0000000000000000000000000000000000000000000000000000055 192.0
DYD3_k127_2720591_0 PFAM Helicase conserved C-terminal domain K08282 - 2.7.11.1 0.0 1270.0
DYD3_k127_2720591_1 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 8.973e-251 780.0
DYD3_k127_2720591_10 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005084 419.0
DYD3_k127_2720591_11 ABC transporter K06861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 394.0
DYD3_k127_2720591_12 ABC-type transport system involved in lipoprotein release permease component K09808,K09815 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 394.0
DYD3_k127_2720591_13 ligase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002014 364.0
DYD3_k127_2720591_14 C-terminal domain of 1-Cys peroxiredoxin K03386 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 322.0
DYD3_k127_2720591_15 PAP2 superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004687 296.0
DYD3_k127_2720591_16 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000537 274.0
DYD3_k127_2720591_17 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001696 265.0
DYD3_k127_2720591_18 7TM diverse intracellular signalling - - - 0.000000000000000000000000000000000000000000000000000000000004069 228.0
DYD3_k127_2720591_19 Acid phosphatase homologues - - - 0.0000000000000000000000000000000000000000000000000000000005781 209.0
DYD3_k127_2720591_2 PFAM Serine carboxypeptidase - - - 2.466e-235 736.0
DYD3_k127_2720591_20 - - - - 0.0000000000000000000000000000000000000000000000000000000008473 204.0
DYD3_k127_2720591_21 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000005936 202.0
DYD3_k127_2720591_22 LysE type translocator - - - 0.000000000000000000000000000000000000000000000000000001598 200.0
DYD3_k127_2720591_23 DinB family - - - 0.00000000000000000000000000000000000000000000000000002294 193.0
DYD3_k127_2720591_24 monooxygenase activity - - - 0.00000000000000000000000000000000000000000000000000006914 190.0
DYD3_k127_2720591_25 N-formylglutamate amidohydrolase - - - 0.0000000000000000000000000000000000000000000000001932 179.0
DYD3_k127_2720591_26 Modulates RecA activity K03565 - - 0.00000000000000000000000000000000000000004363 156.0
DYD3_k127_2720591_27 ABC transporter ATPase - - - 0.000000000000000000000000000000000000007531 150.0
DYD3_k127_2720591_28 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.0000000000000000000000000000000000002161 143.0
DYD3_k127_2720591_29 cyclic nucleotide-binding - - - 0.000000000000003635 83.0
DYD3_k127_2720591_3 single-stranded-DNA-specific exonuclease RecJ K07462 - - 5.413e-215 681.0
DYD3_k127_2720591_30 - - - - 0.000004554 52.0
DYD3_k127_2720591_31 - - - - 0.0002741 50.0
DYD3_k127_2720591_4 Belongs to the DEAD box helicase family K05592 - 3.6.4.13 6.691e-215 681.0
DYD3_k127_2720591_5 Belongs to the ompA family K03640 - - 1.398e-211 677.0
DYD3_k127_2720591_6 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 615.0
DYD3_k127_2720591_7 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001711 506.0
DYD3_k127_2720591_8 PFAM Cysteine-rich domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005839 450.0
DYD3_k127_2720591_9 TIGRFAM mannose-1-phosphate guanylyltransferase mannose-6-phosphate isomerase K00971 - 2.7.7.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 440.0
DYD3_k127_2723980_0 Fe-S oxidoreductase - - - 8.538e-195 617.0
DYD3_k127_2723980_1 nucleotidyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003258 304.0
DYD3_k127_2723980_2 O-antigen ligase like membrane protein - - - 0.000000000000000000000000000000000000000000000001353 190.0
DYD3_k127_2723980_3 Glycosyltransferase like family 2 K07011 - - 0.00000000005432 64.0
DYD3_k127_2735722_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1194.0
DYD3_k127_2735722_1 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 1.911e-208 656.0
DYD3_k127_2735722_2 Acyl dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002043 247.0
DYD3_k127_2735722_3 Belongs to the ompA family - - - 0.00000000000000000000000000000000001852 142.0
DYD3_k127_2735722_4 OmpA family - - - 0.0000000000000007812 83.0
DYD3_k127_2736438_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004666 429.0
DYD3_k127_2736438_1 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000004786 244.0
DYD3_k127_2736438_2 Histidine kinase - - - 0.000000001633 70.0
DYD3_k127_2742259_0 Catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis K01687 - 4.2.1.9 1.344e-274 853.0
DYD3_k127_2742259_1 Acetolactate synthase, large subunit K01652 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 610.0
DYD3_k127_2742259_2 DNA polymerase III, delta' subunit K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 377.0
DYD3_k127_2742259_3 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005603 358.0
DYD3_k127_2742259_4 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002554 276.0
DYD3_k127_2742259_5 Sugar nucleotidyl transferase - - - 0.00000001476 57.0
DYD3_k127_2745381_0 Y_Y_Y domain - - - 0.0 1435.0
DYD3_k127_2745381_1 Belongs to the glycosyl hydrolase 2 family - - - 0.0 1127.0
DYD3_k127_2745381_2 Belongs to the glycosyl hydrolase 5 (cellulase A) family - - - 9.19e-289 910.0
DYD3_k127_2745381_3 Arabinogalactan K01224 - 3.2.1.89 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004014 482.0
DYD3_k127_2745381_4 SMP-30/Gluconolaconase/LRE-like region K14274 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006944 394.0
DYD3_k127_2745381_5 TonB-linked outer membrane protein, SusC RagA family - - - 0.0000000000000000000000000008708 116.0
DYD3_k127_2745381_6 - - - - 0.000000000000000002269 89.0
DYD3_k127_2765251_0 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.0 1116.0
DYD3_k127_2765251_1 PFAM D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K00058 - 1.1.1.399,1.1.1.95 2.61e-307 952.0
DYD3_k127_2765251_10 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.0000000000000000000000000000000000000000000000000000000000000000005434 234.0
DYD3_k127_2765251_11 Bestrophin, RFP-TM, chloride channel K08994 - - 0.0000000000000000000000000000000000007016 150.0
DYD3_k127_2765251_12 PFAM YceI-like domain - - - 0.000000000000000000000000000000002019 136.0
DYD3_k127_2765251_13 DinB family - - - 0.00000000000000000000000000001032 124.0
DYD3_k127_2765251_14 PFAM YceI-like domain - - - 0.00000000000000000000000000009144 122.0
DYD3_k127_2765251_15 PIN domain - - - 0.0000000000000000003557 92.0
DYD3_k127_2765251_16 TPR repeat-containing protein - - - 0.000000000000005775 81.0
DYD3_k127_2765251_17 - - - - 0.000000000000005832 83.0
DYD3_k127_2765251_18 TPR repeat-containing protein - - - 0.00000000004159 68.0
DYD3_k127_2765251_2 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 5.026e-223 698.0
DYD3_k127_2765251_20 peptidyl-tyrosine sulfation - - - 0.000003005 54.0
DYD3_k127_2765251_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002449 490.0
DYD3_k127_2765251_4 Branched-chain amino acid aminotransferase K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002945 407.0
DYD3_k127_2765251_5 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008143 371.0
DYD3_k127_2765251_6 Phenazine biosynthesis-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003206 324.0
DYD3_k127_2765251_7 protein related to plant photosystem II stability assembly factor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003057 308.0
DYD3_k127_2765251_8 Domain of unknown function (DUF4290) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000112 248.0
DYD3_k127_2765251_9 COGs COG3781 membrane protein K08994 - - 0.00000000000000000000000000000000000000000000000000000000000000000003557 242.0
DYD3_k127_277394_0 MacB-like periplasmic core domain - - - 2.967e-313 981.0
DYD3_k127_277394_1 MacB-like periplasmic core domain - - - 1.561e-302 951.0
DYD3_k127_277394_2 MacB-like periplasmic core domain - - - 6.435e-268 850.0
DYD3_k127_277394_3 MacB-like periplasmic core domain - - - 2.168e-219 709.0
DYD3_k127_277394_4 FtsX-like permease family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 364.0
DYD3_k127_277394_5 Transcriptional regulator PadR-like family - - - 0.0000000000000000000000000000000000000000000000000000002392 195.0
DYD3_k127_277394_6 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000000000000000000005326 165.0
DYD3_k127_2777477_0 TonB dependent receptor - - - 0.0 1602.0
DYD3_k127_2777477_1 Starch-binding associating with outer membrane - - - 3.337e-201 637.0
DYD3_k127_2777477_10 Lipid-binding putative hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000003572 234.0
DYD3_k127_2777477_11 PFAM cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000003368 231.0
DYD3_k127_2777477_12 Protein of unknown function (DUF420) K08976 - - 0.000000000000000000000000000000000000000000000000000000000000009051 220.0
DYD3_k127_2777477_13 Uncharacterized protein family, UPF0114 K03535 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000001759 162.0
DYD3_k127_2777477_14 Prokaryotic Cytochrome C oxidase subunit IV - - - 0.000000000000000000000000000001313 123.0
DYD3_k127_2777477_15 Xylose isomerase K01816 - 5.3.1.22 0.000000000000000000000000000008758 121.0
DYD3_k127_2777477_16 Belongs to the heme-copper respiratory oxidase family K02274 - 1.9.3.1 0.0000000000000000000000000001052 115.0
DYD3_k127_2777477_17 Protein of unknown function (DUF983) - - - 0.00000000000000000000000003693 111.0
DYD3_k127_2777477_18 - - - - 0.000000000000000005032 87.0
DYD3_k127_2777477_19 signal sequence binding K07152 - - 0.0000000001306 69.0
DYD3_k127_2777477_2 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000411 606.0
DYD3_k127_2777477_20 Metallo-beta-lactamase superfamily - - - 0.0005346 44.0
DYD3_k127_2777477_3 PFAM FGGY family of carbohydrate kinases, N-terminal domain K00854 - 2.7.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001342 595.0
DYD3_k127_2777477_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001776 594.0
DYD3_k127_2777477_5 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001739 398.0
DYD3_k127_2777477_6 cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008205 383.0
DYD3_k127_2777477_7 Cytochrome oxidase assembly protein K02259 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 294.0
DYD3_k127_2777477_8 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001154 262.0
DYD3_k127_2777477_9 Domain of unknown function (DUF5011) - - - 0.00000000000000000000000000000000000000000000000000000000000000000001139 239.0
DYD3_k127_2779713_0 TIGRFAM NADH-quinone oxidoreductase, chain G K00336 - 1.6.5.3 1.658e-300 943.0
DYD3_k127_2779713_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000526 502.0
DYD3_k127_2779713_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002053 316.0
DYD3_k127_2779713_3 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter, MnhA subunit K00341 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015672,GO:0015988,GO:0015990,GO:0016020,GO:0016021,GO:0030964,GO:0031224,GO:0031226,GO:0032991,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0051179,GO:0051234,GO:0055085,GO:0070469,GO:0070470,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1902600,GO:1990204 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 313.0
DYD3_k127_2779713_4 Belongs to the complex I subunit 6 family K00339 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016021,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0031224,GO:0031226,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.00000000000000000000000000000000000000000000000000002014 193.0
DYD3_k127_2779713_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.0000000000000000000000000000000000002585 144.0
DYD3_k127_2781792_0 Dienelactone hydrolase family - - - 1.368e-308 959.0
DYD3_k127_2781792_1 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00658 - 2.3.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001916 585.0
DYD3_k127_2781792_2 - - - - 0.000000000000000000000000000000000000006242 155.0
DYD3_k127_2781792_3 - - - - 0.000000000000000000000003352 106.0
DYD3_k127_2781792_4 Domain of Unknown Function (DUF350) - - - 0.00000000000000131 83.0
DYD3_k127_2805760_0 phosphoesterase RecJ domain protein K06881 - 3.1.13.3,3.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001642 427.0
DYD3_k127_2805760_1 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002779 400.0
DYD3_k127_2805760_2 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.0000000000000000000000000000000000000000000000000000000000000000001282 231.0
DYD3_k127_2805760_3 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000001439 231.0
DYD3_k127_2805760_4 FKBP-type peptidyl-prolyl cis-trans isomerase - - - 0.000000000000000000000000000000000000000000000000000000000002279 220.0
DYD3_k127_2805760_5 PFAM FKBP-type peptidyl-prolyl cis-trans isomerase K01802,K03767,K03772,K03773 - 5.2.1.8 0.000000000000000000000008872 107.0
DYD3_k127_2805760_6 Proposed nucleic acid binding domain - - - 0.000000000000000000002703 97.0
DYD3_k127_2813891_0 Pirin C-terminal cupin domain K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005621 374.0
DYD3_k127_2813891_1 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000005991 179.0
DYD3_k127_2813891_2 OsmC-like protein K07397 - - 0.000000000000000000000000000001538 124.0
DYD3_k127_2813891_3 Divergent 4Fe-4S mono-cluster - - - 0.0000000000000000000000000007605 113.0
DYD3_k127_2854978_0 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 621.0
DYD3_k127_2854978_1 SusD family K21572 - - 0.00000000000000000000000000000000000000000009747 165.0
DYD3_k127_2865944_0 C-terminal domain of CHU protein family - - - 3.13e-294 937.0
DYD3_k127_2865944_1 HmuY protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009975 319.0
DYD3_k127_2879656_0 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002817 297.0
DYD3_k127_2879656_1 Fructosamine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001218 284.0
DYD3_k127_2879656_2 COGs COG2133 Glucose sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000168 228.0
DYD3_k127_2879846_0 PFAM TonB-dependent Receptor Plug Domain K02014 - - 7.732e-232 741.0
DYD3_k127_2879846_1 ABC-type uncharacterized transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002879 514.0
DYD3_k127_2879846_2 glycosyl transferase family 2 K20534 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002524 340.0
DYD3_k127_2879846_3 PFAM glycosyl transferase family 39 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006827 345.0
DYD3_k127_2879846_4 PFAM UbiA prenyltransferase K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004383 293.0
DYD3_k127_2879846_5 Domain of unknown function (DUF4340) - - - 0.000000000000000000000000000000000005305 149.0
DYD3_k127_2879846_6 PAP2 superfamily - - - 0.00000000000000000000000000001411 127.0
DYD3_k127_2879846_7 Peptidase, S9A B C family, catalytic domain protein K01322 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.21.26 0.000000000000002827 76.0
DYD3_k127_2883027_0 Biotin-lipoyl like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 490.0
DYD3_k127_2883027_1 PFAM Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004971 342.0
DYD3_k127_2883027_2 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002999 316.0
DYD3_k127_2883027_3 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.00000000000000000000000000000000000000000000000000000000000000001321 230.0
DYD3_k127_2883027_4 PFAM ABC transporter - - - 0.000002599 50.0
DYD3_k127_290906_0 MacB-like periplasmic core domain - - - 1.435e-200 655.0
DYD3_k127_290906_1 cell adhesion involved in biofilm formation - - - 4.456e-196 656.0
DYD3_k127_290906_10 - - - - 0.0000005346 59.0
DYD3_k127_290906_2 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003411 375.0
DYD3_k127_290906_3 DNA alkylation repair enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002482 295.0
DYD3_k127_290906_4 fatty acid desaturase K09836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002157 263.0
DYD3_k127_290906_5 3-demethylubiquinone-9 3-methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000004902 207.0
DYD3_k127_290906_6 Activator of Hsp90 ATPase - - - 0.00000000000000000000000000000000000000000000000000000872 193.0
DYD3_k127_290906_7 3-demethylubiquinone-9 3-methyltransferase K04750 - - 0.0000000000000000000000000000000000000003109 153.0
DYD3_k127_290906_8 DoxX-like family - - - 0.00000000000000000000000000000000001487 139.0
DYD3_k127_290906_9 Domain of unknown function (DU1801) - - - 0.000000000000000000000000000000002448 132.0
DYD3_k127_2918746_0 Sigma-70 region 2 K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002364 281.0
DYD3_k127_2918746_1 DinB superfamily - - - 0.0000000000000000000001027 106.0
DYD3_k127_2918746_2 Histidine kinase - - - 0.000008721 57.0
DYD3_k127_2926635_0 COG2303 Choline dehydrogenase and related - - - 0.0 1026.0
DYD3_k127_2926635_1 lysine biosynthetic process via aminoadipic acid - - - 1.62e-270 853.0
DYD3_k127_2926635_10 Gluconate 2-dehydrogenase subunit 3 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005222 265.0
DYD3_k127_2926635_11 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000584 239.0
DYD3_k127_2926635_12 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000000000000000000000000002247 183.0
DYD3_k127_2926635_13 Belongs to the peptidase S51 family K13282 - 3.4.15.6 0.00000000000000000000000000000000000000001853 163.0
DYD3_k127_2926635_14 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000000000000000003082 154.0
DYD3_k127_2926635_17 Transcriptional regulator K07727 - - 0.0000000000004144 71.0
DYD3_k127_2926635_18 alpha/beta hydrolase fold - - - 0.00000000008893 73.0
DYD3_k127_2926635_2 FtsX-like permease family - - - 1.867e-266 846.0
DYD3_k127_2926635_3 MacB-like periplasmic core domain K02004 - - 1.143e-221 716.0
DYD3_k127_2926635_4 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004117 602.0
DYD3_k127_2926635_5 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003043 580.0
DYD3_k127_2926635_6 FtsX-like permease family K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 564.0
DYD3_k127_2926635_7 PFAM Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 528.0
DYD3_k127_2926635_8 HlyD membrane-fusion protein of T1SS - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000406 468.0
DYD3_k127_2926635_9 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003229 354.0
DYD3_k127_2931018_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 2.996e-232 727.0
DYD3_k127_2931018_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 5.356e-215 680.0
DYD3_k127_2931018_10 O-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007051 449.0
DYD3_k127_2931018_11 PFAM CBS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006168 443.0
DYD3_k127_2931018_12 Cys/Met metabolism PLP-dependent enzyme K10907,K14267,K14287 - 2.6.1.17,2.6.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002531 429.0
DYD3_k127_2931018_13 KR domain K00023,K00059 - 1.1.1.100,1.1.1.36 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003655 348.0
DYD3_k127_2931018_14 Bacterial lipid A biosynthesis acyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002812 343.0
DYD3_k127_2931018_15 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K13566 - 3.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000278 321.0
DYD3_k127_2931018_16 Belongs to the beta-ketoacyl-ACP synthases family K00647 - 2.3.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005253 312.0
DYD3_k127_2931018_17 Beta-ketoacyl synthase, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 294.0
DYD3_k127_2931018_18 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000433 261.0
DYD3_k127_2931018_19 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000855 232.0
DYD3_k127_2931018_2 Aromatic amino acid lyase K01745,K10774 - 4.3.1.23,4.3.1.3 9.635e-211 666.0
DYD3_k127_2931018_20 Thioesterase-like superfamily K07107 - - 0.000000000000000000000000000000000000000000000004981 175.0
DYD3_k127_2931018_21 3-oxoacyl-ACP synthase - - - 0.000000000000000000000000000000000000000000001188 172.0
DYD3_k127_2931018_22 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.000000000000000000000000000000000000000000004699 167.0
DYD3_k127_2931018_23 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.00000000000000000000000000002788 121.0
DYD3_k127_2931018_24 dehydratase - - - 0.00000000000000000000000000005056 121.0
DYD3_k127_2931018_25 acyl carrier protein K02078 - - 0.0000000000000000000000000009593 115.0
DYD3_k127_2931018_26 Thioesterase-like superfamily K07107 - - 0.000000000000000000000000001928 117.0
DYD3_k127_2931018_27 Phosphopantetheine attachment site K02078 - - 0.000000000000000000000000002211 113.0
DYD3_k127_2931018_28 Polysaccharide deacetylase K22278 - 3.5.1.104 0.0004591 45.0
DYD3_k127_2931018_3 Belongs to the beta-ketoacyl-ACP synthases family K00647 - 2.3.1.41 1.61e-197 621.0
DYD3_k127_2931018_4 Amidase K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 610.0
DYD3_k127_2931018_5 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 542.0
DYD3_k127_2931018_6 Na H antiporter NhaD and related arsenite - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001544 542.0
DYD3_k127_2931018_7 Tryptophan halogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 504.0
DYD3_k127_2931018_8 Na H antiporter NhaD and related arsenite - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002652 497.0
DYD3_k127_2931018_9 Belongs to the beta-ketoacyl-ACP synthases family K00647 - 2.3.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001758 466.0
DYD3_k127_2945411_0 Permease YjgP YjgQ family K07091 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002403 540.0
DYD3_k127_2945411_1 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000005963 265.0
DYD3_k127_2945411_2 Pfam Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000002615 161.0
DYD3_k127_2945411_3 Tetratricopeptide repeat - - - 0.000000000000000002432 91.0
DYD3_k127_2949299_0 usher protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006689 443.0
DYD3_k127_2949299_1 PFAM 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 428.0
DYD3_k127_2949299_2 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006291 357.0
DYD3_k127_2949299_3 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008314 271.0
DYD3_k127_2949299_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000001663 243.0
DYD3_k127_2949299_5 phytanoyl-CoA dioxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000001993 226.0
DYD3_k127_2955357_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1030.0
DYD3_k127_2955357_1 Belongs to the RimK family K05844 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003133 415.0
DYD3_k127_2955357_2 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005256 423.0
DYD3_k127_2955357_3 peptidase activity K01266 - 3.4.11.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 370.0
DYD3_k127_2955357_4 SMP-30/Gluconolaconase/LRE-like region K01053 - 3.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000001776 229.0
DYD3_k127_2955357_5 - - - - 0.0000000000000000000000000000000000000000000000009391 177.0
DYD3_k127_2955357_6 Putative ATP-dependant zinc protease - - - 0.0000000000000000000000000000000000000005751 153.0
DYD3_k127_2955357_7 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K02014,K07275,K16087 - - 0.000000000000000000000008311 109.0
DYD3_k127_2964593_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003877 619.0
DYD3_k127_2964593_1 methyltransferase activity - - - 0.000000000000000000000001805 106.0
DYD3_k127_2964593_2 Ankyrin repeats (3 copies) K21440 - - 0.00004886 53.0
DYD3_k127_2964593_4 - - - - 0.0004233 52.0
DYD3_k127_2974670_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1384.0
DYD3_k127_2974670_1 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005722 583.0
DYD3_k127_2974670_2 PFAM Serine dehydratase alpha chain K01752 - 4.3.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003843 442.0
DYD3_k127_2974670_3 YdjC-like protein K03478 - 3.5.1.105 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000741 439.0
DYD3_k127_2974670_5 - - - - 0.0000000000000000004199 95.0
DYD3_k127_298456_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951,K01139 - 2.7.6.5,3.1.7.2 1.255e-238 744.0
DYD3_k127_298456_1 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003431 492.0
DYD3_k127_298456_2 Trigger factor K03545 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 428.0
DYD3_k127_298456_3 TIGRFAM Bacteroidetes-specific - - - 0.0000000000000000000000000000000000000000000000000000000000000006386 230.0
DYD3_k127_298456_4 - - - - 0.000000009564 56.0
DYD3_k127_2986632_0 PFAM Carbamoyl-phosphate synthase L chain, ATP binding K01961,K01965 - 6.3.4.14,6.4.1.2,6.4.1.3 1.738e-219 690.0
DYD3_k127_2986632_1 PFAM Aminotransferase class I and II K00639 - 2.3.1.29 3.111e-210 659.0
DYD3_k127_2986632_10 CAAX protease self-immunity - - - 0.0000000000000000000000000000000000000000000000001146 188.0
DYD3_k127_2986632_11 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000004829 151.0
DYD3_k127_2986632_12 Thioredoxin K03671 - - 0.000000000000000000000000000000000000001419 149.0
DYD3_k127_2986632_13 Maf-like protein K06287 - - 0.000000000000000000000000000000000000001599 155.0
DYD3_k127_2986632_14 - - - - 0.0000000000000000000000000003498 124.0
DYD3_k127_2986632_15 histone H1-like protein - - - 0.0000000000000000000004083 96.0
DYD3_k127_2986632_16 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.0000000000000000004283 88.0
DYD3_k127_2986632_17 Protein of unknown function (DUF2892) - - - 0.0000000000000005129 80.0
DYD3_k127_2986632_18 alginate O-acetyltransferase - - - 0.000000000008448 66.0
DYD3_k127_2986632_2 Protein of unknown function (DUF1015) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 603.0
DYD3_k127_2986632_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001898 503.0
DYD3_k127_2986632_4 Glycosyl transferase family 90 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 370.0
DYD3_k127_2986632_5 Calcineurin-like phosphoesterase K03269 - 3.6.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005307 355.0
DYD3_k127_2986632_6 N-terminal domain of galactosyltransferase K07011 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006518 289.0
DYD3_k127_2986632_7 PFAM Outer membrane efflux protein K12340 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006665 273.0
DYD3_k127_2986632_8 COGs COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase K01420 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000272 261.0
DYD3_k127_2986632_9 Methyltransferase FkbM domain - - - 0.00000000000000000000000000000000000000000000000000000000000000009722 231.0
DYD3_k127_2993283_0 K -dependent Na Ca exchanger - - - 0.000000000000000000000000000000000000000000000000000000000000000000001422 246.0
DYD3_k127_2993283_1 Cation transport ATPase (P-type) K01537 - 3.6.3.8 0.0000000000000000000000000000000000000000000000000000000000000001799 224.0
DYD3_k127_2993283_2 Phosphoribosyl transferase domain K07100 - - 0.0000000000000000000000000000000000000000000000000562 185.0
DYD3_k127_2993283_3 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000000000004922 171.0
DYD3_k127_2993283_4 Uncharacterized conserved protein (DUF2267) - - - 0.000000000000000000000000000005664 124.0
DYD3_k127_2993283_5 Domain of unknown function (DUF4136) - - - 0.000000000006809 69.0
DYD3_k127_2993589_0 Predicted membrane protein (DUF2339) - - - 4.544e-258 818.0
DYD3_k127_2993589_1 - - - - 0.000000000000000000000000000000000000000000000005634 176.0
DYD3_k127_2993589_2 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000001133 68.0
DYD3_k127_2993589_3 regulation of response to stimulus - - - 0.0000006833 60.0
DYD3_k127_301136_0 PFAM Cytochrome c assembly protein K02198 - - 0.0 1060.0
DYD3_k127_301136_1 PFAM NAD dependent epimerase dehydratase family K08679 - 5.1.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003176 516.0
DYD3_k127_301136_2 PFAM Cytochrome c assembly protein K02195 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003176 327.0
DYD3_k127_301136_3 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02474,K13015 - 1.1.1.136 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002631 267.0
DYD3_k127_301136_4 ABC-type transport system involved in cytochrome c biogenesis permease component K02194 - - 0.0000000000000000000000000000000000000000000000000000000000000835 219.0
DYD3_k127_301136_5 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.000000000000000000000000000000000000000000000000000001096 196.0
DYD3_k127_301136_7 Galactose oxidase, central domain - - - 0.000000001529 66.0
DYD3_k127_3015077_0 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009676 446.0
DYD3_k127_3015077_1 Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide K08641 - 3.4.13.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005381 341.0
DYD3_k127_3015077_2 Putative esterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009948 293.0
DYD3_k127_3015077_3 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000005442 186.0
DYD3_k127_3015077_4 Domain of unknown function (DU1801) - - - 0.0000000000000000000000000000000000000000001657 161.0
DYD3_k127_3015077_5 epoxide hydrolase - GO:0000287,GO:0001676,GO:0003008,GO:0003013,GO:0003018,GO:0003674,GO:0003824,GO:0004301,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005782,GO:0005829,GO:0006082,GO:0006605,GO:0006625,GO:0006629,GO:0006631,GO:0006633,GO:0006690,GO:0006725,GO:0006793,GO:0006796,GO:0006805,GO:0006810,GO:0006873,GO:0006874,GO:0006875,GO:0006886,GO:0006950,GO:0006952,GO:0006954,GO:0006996,GO:0007031,GO:0008015,GO:0008104,GO:0008150,GO:0008152,GO:0008217,GO:0008610,GO:0009056,GO:0009058,GO:0009410,GO:0009636,GO:0009810,GO:0009893,GO:0009987,GO:0010468,GO:0010604,GO:0010628,GO:0015031,GO:0015643,GO:0015833,GO:0016043,GO:0016053,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0016801,GO:0016803,GO:0017144,GO:0018904,GO:0019216,GO:0019218,GO:0019222,GO:0019369,GO:0019373,GO:0019439,GO:0019725,GO:0019752,GO:0030003,GO:0030258,GO:0031907,GO:0031974,GO:0032501,GO:0032787,GO:0033036,GO:0033365,GO:0033559,GO:0034613,GO:0035150,GO:0035296,GO:0042221,GO:0042577,GO:0042578,GO:0042579,GO:0042592,GO:0042632,GO:0042759,GO:0042802,GO:0042803,GO:0042886,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043574,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046272,GO:0046394,GO:0046483,GO:0046839,GO:0046872,GO:0046907,GO:0046983,GO:0048518,GO:0048878,GO:0050789,GO:0050801,GO:0050880,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051716,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0055088,GO:0055092,GO:0060255,GO:0062012,GO:0065007,GO:0065008,GO:0070013,GO:0070727,GO:0070887,GO:0071466,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072330,GO:0072503,GO:0072507,GO:0072593,GO:0072594,GO:0072662,GO:0072663,GO:0080090,GO:0090066,GO:0090181,GO:0097176,GO:0097746,GO:0097755,GO:0098771,GO:1900673,GO:1901360,GO:1901361,GO:1901568,GO:1901575,GO:1901576 - 0.00000008876 63.0
DYD3_k127_3023911_0 COGs COG2133 Glucose sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001618 387.0
DYD3_k127_3023911_1 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000003249 199.0
DYD3_k127_3023911_2 Gaf domain K02660,K07315,K17763 - 3.1.3.3 0.00004131 49.0
DYD3_k127_3041582_0 Peptidase family C25 - - - 6.926e-243 786.0
DYD3_k127_3041582_1 long-chain fatty acid transport protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001773 426.0
DYD3_k127_3041582_2 TonB-linked outer membrane protein, SusC RagA family - - - 0.0000000000000000000000000000000000000000000000000000008177 203.0
DYD3_k127_3048855_0 regulation of response to stimulus - - - 0.0000000000000000000000000000000001042 136.0
DYD3_k127_3048855_1 C-terminal domain of CHU protein family - - - 0.0000000017 70.0
DYD3_k127_3048855_2 Excalibur calcium-binding domain - - - 0.00000005854 55.0
DYD3_k127_3052603_0 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000971 385.0
DYD3_k127_3052603_1 bacterial OsmY and nodulation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003196 279.0
DYD3_k127_3052603_2 L,D-transpeptidase catalytic domain K19234 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008702 282.0
DYD3_k127_3052603_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000007684 178.0
DYD3_k127_3052603_4 DnaJ molecular chaperone homology domain K03686,K05516 - - 0.0000000000000000000000000000000000000000002991 161.0
DYD3_k127_3055501_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 8.129e-246 767.0
DYD3_k127_3055501_1 PFAM Integral membrane protein TerC K05794 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001708 416.0
DYD3_k127_3055501_3 - - - - 0.0000004516 59.0
DYD3_k127_3056208_0 COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL CutL homologs K07303 - 1.3.99.16 2.387e-260 820.0
DYD3_k127_3056208_1 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS K07302 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000000000000000003297 248.0
DYD3_k127_3056208_2 lactoylglutathione lyase activity - - - 0.000000000000000000000000985 104.0
DYD3_k127_3059297_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000006847 176.0
DYD3_k127_3064241_0 DEAD DEAH box helicase K03724 - - 0.0 1113.0
DYD3_k127_3064241_1 PFAM TonB-dependent Receptor Plug - - - 1.189e-285 889.0
DYD3_k127_3064241_10 DNA photolyase K01669 - 4.1.99.3 0.000000000000000000000000158 108.0
DYD3_k127_3064241_11 Uncharacterized protein conserved in bacteria (DUF2141) - - - 0.000000000000000000000003522 107.0
DYD3_k127_3064241_12 - - - - 0.0000000000000000002374 94.0
DYD3_k127_3064241_2 TIGRFAM phytoene desaturase K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 4.599e-205 648.0
DYD3_k127_3064241_3 PFAM Cys Met metabolism PLP-dependent enzyme K01739,K01758,K01760 - 2.5.1.48,4.4.1.1,4.4.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000741 579.0
DYD3_k127_3064241_4 COGs COG4299 conserved - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002574 489.0
DYD3_k127_3064241_5 PFAM Squalene phytoene synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 355.0
DYD3_k127_3064241_6 PFAM CobQ CobB MinD ParA nucleotide binding domain K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002467 258.0
DYD3_k127_3064241_7 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000000000005145 232.0
DYD3_k127_3064241_8 long-chain fatty acid transport protein - - - 0.00000000000000000000000000000000000001121 153.0
DYD3_k127_3064241_9 Cytochrome C oxidase, cbb3-type, subunit III K00405 - - 0.000000000000000000000000000000002416 135.0
DYD3_k127_3065034_0 PFAM Peptidase M16 inactive domain K07263 - - 0.0 1251.0
DYD3_k127_3065034_1 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 GO:0000731,GO:0003674,GO:0003824,GO:0003887,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006281,GO:0006301,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016604,GO:0016607,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019985,GO:0031974,GO:0031981,GO:0032991,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0035770,GO:0036464,GO:0042276,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0070013,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576,GO:1990904 2.7.7.7 0.0000000003092 62.0
DYD3_k127_3068367_0 Nicotinate-nucleotide adenylyltransferase - - - 2.338e-215 677.0
DYD3_k127_3068367_1 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002141 602.0
DYD3_k127_3068367_2 Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family K03308 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000148 421.0
DYD3_k127_3068367_3 TIGRFAM FeS assembly protein SufD K09015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006277 274.0
DYD3_k127_3068367_4 Belongs to the UPF0403 family - - - 0.000000000000000000000000000000000000000000000000000000000000000003014 228.0
DYD3_k127_3068367_5 SufE protein probably involved in Fe-S center assembly K02426 - - 0.000000000000000000000000000000000000000000000000000000000001323 211.0
DYD3_k127_3068367_6 FeS assembly SUF system protein - - - 0.0000000000000000000000000000000000000000000004454 168.0
DYD3_k127_3078407_0 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002366 493.0
DYD3_k127_3078407_1 Belongs to the DegT DnrJ EryC1 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002902 490.0
DYD3_k127_3078407_2 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02474,K13015 - 1.1.1.136 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 453.0
DYD3_k127_3078407_3 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002236 412.0
DYD3_k127_3078407_4 Hexapeptide repeat of succinyl-transferase K13018 - 2.3.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 324.0
DYD3_k127_3081440_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 552.0
DYD3_k127_3081440_1 TIGRFAM gluconate transporter K06155 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005845 364.0
DYD3_k127_3081440_2 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000001234 256.0
DYD3_k127_3081440_4 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.000000000000000000001316 95.0
DYD3_k127_3084340_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.0 1185.0
DYD3_k127_3084340_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000336 467.0
DYD3_k127_3084340_2 Dihydroorotate dehydrogenase K00226 - 1.3.98.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003021 412.0
DYD3_k127_3084340_3 Low-potential electron donor to a number of redox enzymes K03839 - - 0.0000000000000000000000000000000000000000000000000000000000000004424 223.0
DYD3_k127_3084340_4 - - - - 0.00000002203 57.0
DYD3_k127_3088131_0 efflux transmembrane transporter activity K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004762 544.0
DYD3_k127_3088131_1 TIGRFAM Acidobacterial duplicated orphan permease K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005631 526.0
DYD3_k127_3088131_2 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002356 517.0
DYD3_k127_3088131_3 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008646 334.0
DYD3_k127_3088131_4 Putative lumazine-binding - - - 0.000000000001875 70.0
DYD3_k127_3088131_5 Plasmid stabilization system - - - 0.0000000001445 65.0
DYD3_k127_3088131_6 MacB-like periplasmic core domain - - - 0.000004199 50.0
DYD3_k127_3096199_0 TIGRFAM Na H antiporter NhaC K03315 - - 7.439e-196 621.0
DYD3_k127_3096199_1 Saccharopine dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003723 514.0
DYD3_k127_3096199_10 - - - - 0.0000000000000000000000000000000000000002074 158.0
DYD3_k127_3096199_11 membrane protein (DUF2154) - - - 0.0000000000000000000000000000000000001149 145.0
DYD3_k127_3096199_12 Domain of unknown function (DUF4442) - - - 0.0000000000000000000000000000001708 127.0
DYD3_k127_3096199_13 Domain of unknown function (DUF4288) - - - 0.0000000000000000000003083 100.0
DYD3_k127_3096199_2 Cation efflux family K16264 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 345.0
DYD3_k127_3096199_3 Trehalose utilisation K09992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 329.0
DYD3_k127_3096199_4 response regulator, receiver K02477 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 311.0
DYD3_k127_3096199_5 smart pdz dhr glgf - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004242 301.0
DYD3_k127_3096199_6 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004616 287.0
DYD3_k127_3096199_7 3'-5' exonuclease - - - 0.0000000000000000000000000000000000000000000000000000007441 198.0
DYD3_k127_3096199_8 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000001187 193.0
DYD3_k127_3096199_9 TIGRFAM export-related chaperone CsaA K06878 - - 0.000000000000000000000000000000000000000000000000009743 181.0
DYD3_k127_3106403_0 Belongs to the glycosyl hydrolase 2 family K05970 - 3.1.1.53 1.115e-302 949.0
DYD3_k127_3106403_1 FtsX-like permease family K02004 - - 5.612e-213 687.0
DYD3_k127_3106403_2 Calcineurin-like phosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 553.0
DYD3_k127_3106403_3 Protein of unknown function (DUF2905) - - - 0.00000000000000000000001592 101.0
DYD3_k127_3106403_4 - - - - 0.00000000000000000000003512 106.0
DYD3_k127_3106403_5 Transcriptional regulatory protein, C terminal - - - 0.0000000006695 65.0
DYD3_k127_3106403_6 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000221 49.0
DYD3_k127_3106403_7 DoxX-like family - - - 0.00005449 52.0
DYD3_k127_310897_0 Belongs to the IlvD Edd family - - - 2.666e-261 813.0
DYD3_k127_310897_1 PFAM Na dependent nucleoside transporter K03317 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003631 564.0
DYD3_k127_310897_10 PFAM Uncharacterised ACR, COG1259 K08999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 287.0
DYD3_k127_310897_11 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005612 271.0
DYD3_k127_310897_12 TIGRFAM 1-acyl-sn-glycerol-3-phosphate acyltransferases K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000005429 265.0
DYD3_k127_310897_13 HEPN domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002734 248.0
DYD3_k127_310897_14 Peptidyl-prolyl cis-trans isomerase K03775 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000001367 224.0
DYD3_k127_310897_15 Integrase core domain K07497 - - 0.000000000000000000000000000000000000000000000000003489 187.0
DYD3_k127_310897_16 Protein of unknown function (DUF2911) - - - 0.000000000000000000000000000000000000000000001526 171.0
DYD3_k127_310897_17 Integrase core domain K07497 - - 0.000000000000000000000000000000000000003335 148.0
DYD3_k127_310897_18 Transposase K07497 - - 0.000000000000000000000000000000000002546 138.0
DYD3_k127_310897_19 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.000000000000000000000000007592 111.0
DYD3_k127_310897_2 RimK-like ATPgrasp N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007878 546.0
DYD3_k127_310897_20 Fic/DOC family K07341 - - 0.00000000000000000000000003246 110.0
DYD3_k127_310897_21 - - - - 0.000000000000000004497 89.0
DYD3_k127_310897_22 Type IV pilus biogenesis stability protein PilW - - - 0.000000000000000004976 89.0
DYD3_k127_310897_23 Transposase domain (DUF772) - - - 0.000000000001965 71.0
DYD3_k127_310897_26 Fic/DOC family K07341 - - 0.000003394 49.0
DYD3_k127_310897_3 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005665 496.0
DYD3_k127_310897_4 Short-chain dehydrogenase reductase SDR K13774 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006782 464.0
DYD3_k127_310897_5 Electron transfer flavoprotein, alpha subunit K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000992 441.0
DYD3_k127_310897_6 Glutamate-cysteine ligase family 2(GCS2) K06048 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000246 422.0
DYD3_k127_310897_7 Putative esterase K07214 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008752 411.0
DYD3_k127_310897_8 Electron transfer flavoprotein K03521 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 379.0
DYD3_k127_310897_9 OmpA family K02557 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009565 346.0
DYD3_k127_3109846_0 PFAM TonB-dependent Receptor Plug - - - 1.09e-295 932.0
DYD3_k127_3109846_1 PFAM TonB-dependent Receptor Plug - - - 2.116e-287 902.0
DYD3_k127_3109846_2 Large extracellular alpha-helical protein - - - 2.865e-198 644.0
DYD3_k127_3109846_3 Domain of unknown function (DUF4249) - - - 0.00000000000000000000000000000000000000000000000000000000001102 220.0
DYD3_k127_3109846_4 Domain of unknown function (DUF4249) - - - 0.000000000000000000000000000008234 129.0
DYD3_k127_3109846_5 - - - - 0.0000000000000000002525 97.0
DYD3_k127_3115800_0 CHASE3 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001597 571.0
DYD3_k127_3115800_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003191 465.0
DYD3_k127_3115800_2 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000002247 234.0
DYD3_k127_3115800_3 GHKL domain - - - 0.0000000000000000000000000000000000000000000000000000000000245 219.0
DYD3_k127_3125541_0 TonB dependent receptor - - - 0.0 1205.0
DYD3_k127_3125541_1 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain - - - 1.099e-225 711.0
DYD3_k127_3125541_10 L-rhamnose-proton symport protein (RhaT) K02856 - - 0.00000000000000000000000000000000000000000000000000001442 189.0
DYD3_k127_3125541_11 Stress responsive A/B Barrel Domain - - - 0.000000000000000000000000000000005864 133.0
DYD3_k127_3125541_12 PspC domain protein K03973 - - 0.000000000001191 69.0
DYD3_k127_3125541_2 Oxidoreductase domain protein - - - 5.05e-214 671.0
DYD3_k127_3125541_3 Sulfatase K01130 - 3.1.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005522 595.0
DYD3_k127_3125541_4 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 526.0
DYD3_k127_3125541_5 Pfam:SusD K21572 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004605 492.0
DYD3_k127_3125541_6 helix_turn_helix gluconate operon transcriptional repressor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002254 482.0
DYD3_k127_3125541_7 exo-alpha-(2->6)-sialidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004355 381.0
DYD3_k127_3125541_8 GDSL-like Lipase/Acylhydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005093 318.0
DYD3_k127_3125541_9 COG1132 ABC-type multidrug transport system, ATPase and permease components K06147 - - 0.00000000000000000000000000000000000000000000000000000005349 217.0
DYD3_k127_3144085_0 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000774 566.0
DYD3_k127_3144085_1 DNA-directed DNA polymerase K02337 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005147 361.0
DYD3_k127_3144085_2 Oxygenase, catalysing oxidative methylation of damaged DNA K09990 - - 0.0000000000000000000000000000000000000000000001678 171.0
DYD3_k127_3144085_3 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000000000006037 136.0
DYD3_k127_3159452_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1086.0
DYD3_k127_3159452_1 Domain of unknown function (DUF368) K08974 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000063 276.0
DYD3_k127_3159452_2 PFAM Shikimate dehydrogenase substrate binding domain K00014 - 1.1.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000009277 267.0
DYD3_k127_3159452_3 penicillin amidase K01434 - 3.5.1.11 0.0000000000000000000002995 98.0
DYD3_k127_3169561_0 Starch-binding associating with outer membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003409 547.0
DYD3_k127_3169561_1 PFAM TonB-dependent Receptor Plug - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 431.0
DYD3_k127_3169561_2 Domain of unknown function (DUF4397) - - - 0.0000000001098 72.0
DYD3_k127_3182483_0 FtsX-like permease family K02004 - - 0.0 1064.0
DYD3_k127_3182483_1 FtsX-like permease family K02004 - - 2.277e-266 847.0
DYD3_k127_3182483_2 Belongs to the glycosyl hydrolase 30 family K01201 - 3.2.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001827 570.0
DYD3_k127_3182483_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006836 265.0
DYD3_k127_3182483_4 Prolyl 4-hydroxylase alpha subunit homologues. K07394 - - 0.0000000000000000000000000000000000000000000000000000000000007836 216.0
DYD3_k127_3182483_5 transcriptional regulator - - - 0.000000000000000000000000000000000000000002667 157.0
DYD3_k127_3182483_6 PFAM Formylglycine-generating sulfatase enzyme - - - 0.000000000000003454 85.0
DYD3_k127_3202080_0 Belongs to the heme-copper respiratory oxidase family K02274 - 1.9.3.1 0.0 1040.0
DYD3_k127_3202080_1 PFAM Polysulphide reductase, NrfD K00185 - - 8.288e-253 784.0
DYD3_k127_3202080_2 Quinol cytochrome c oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000044 595.0
DYD3_k127_3202080_3 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004071 409.0
DYD3_k127_3202080_4 Quinol cytochrome c oxidoreductase membrane protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005616 256.0
DYD3_k127_3202080_5 PFAM Cytochrome C - - - 0.0000000000000000000000000000000000000000000000000000000000001566 218.0
DYD3_k127_3218359_0 MacB-like periplasmic core domain K02004 - - 0.0 1046.0
DYD3_k127_3218359_1 PFAM peptidase M13, neprilysin K01415,K07386 - 3.4.24.71 1.302e-232 738.0
DYD3_k127_3218359_2 FtsX-like permease family - - - 0.0000000000000000000000000000000000000000000000001603 183.0
DYD3_k127_3218359_3 DinB family - - - 0.00000000002335 70.0
DYD3_k127_3225223_0 COG1228 Imidazolonepropionase and related - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001846 548.0
DYD3_k127_3225223_1 C-terminal region of aryl-sulfatase K01130 - 3.1.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005299 511.0
DYD3_k127_3225223_2 Pyridoxal-phosphate dependent enzyme K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001812 427.0
DYD3_k127_3225223_3 PFAM Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005289 322.0
DYD3_k127_3225223_4 thioredoxin peroxidase activity K11065 GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008379,GO:0009405,GO:0009605,GO:0009607,GO:0009636,GO:0009987,GO:0015036,GO:0016209,GO:0016491,GO:0016667,GO:0016671,GO:0016684,GO:0019725,GO:0020012,GO:0030312,GO:0030682,GO:0032843,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0043207,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0050789,GO:0050794,GO:0050896,GO:0051409,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0051805,GO:0051807,GO:0051832,GO:0051834,GO:0051920,GO:0052060,GO:0052173,GO:0052200,GO:0052376,GO:0052551,GO:0052564,GO:0052565,GO:0052572,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0071944,GO:0075136,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.11.1.15 0.000000000000000000000000000000000000000000000000000001495 196.0
DYD3_k127_3225223_5 Late embryogenesis abundant protein - - - 0.0000000000000000000000002067 110.0
DYD3_k127_3258863_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 7.224e-299 921.0
DYD3_k127_3258863_1 Domain of unknown function (DUF4270) - - - 0.0001283 54.0
DYD3_k127_328070_0 protein transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 301.0
DYD3_k127_328070_1 Calcineurin-like phosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001593 298.0
DYD3_k127_328070_2 - - - - 0.000000000000000000000000000000000000000000001426 171.0
DYD3_k127_328070_3 helix_turn_helix, arabinose operon control protein K07506 - - 0.00000000000000001548 86.0
DYD3_k127_328070_4 - - - - 0.000002466 57.0
DYD3_k127_3284684_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 2.192e-320 1002.0
DYD3_k127_3284684_1 GMC oxidoreductase - - - 1.524e-300 928.0
DYD3_k127_3284684_10 Protein of unknown function (DUF2721) - - - 0.0000000000000000000000000000000007828 135.0
DYD3_k127_3284684_11 Gluconate 2-dehydrogenase subunit 3 - - - 0.0000000000000000001225 95.0
DYD3_k127_3284684_2 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 1.935e-283 878.0
DYD3_k127_3284684_3 peptidyl-prolyl isomerase K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 539.0
DYD3_k127_3284684_4 aldo keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002383 509.0
DYD3_k127_3284684_5 PFAM ATPase associated with various cellular activities K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001643 490.0
DYD3_k127_3284684_6 peptidyl-prolyl isomerase K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001188 486.0
DYD3_k127_3284684_7 Xylose isomerase domain protein TIM barrel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006448 249.0
DYD3_k127_3284684_8 Belongs to the ClpA ClpB family K03696 - - 0.000000000000000000000000000000000000000000000004932 173.0
DYD3_k127_3284684_9 COG NOG23400 non supervised orthologous group - - - 0.000000000000000000000000000000000000000000006901 174.0
DYD3_k127_329519_0 Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P) K00849 - 2.7.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 378.0
DYD3_k127_329519_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.0000000000000000000000000000000000000000000000000000000000000602 214.0
DYD3_k127_329519_2 NUDIX domain - - - 0.00000000000000000000000000000000000000000000008447 174.0
DYD3_k127_329519_3 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 - 2.7.7.87 0.00000000000000000000007405 99.0
DYD3_k127_3296954_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 1.134e-311 962.0
DYD3_k127_3296954_1 Lamin Tail Domain - - - 2.084e-239 789.0
DYD3_k127_3296954_2 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000739 526.0
DYD3_k127_3296954_3 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003681 455.0
DYD3_k127_3296954_4 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005223 327.0
DYD3_k127_3296954_5 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001894 277.0
DYD3_k127_3296954_6 PFAM Prokaryotic dksA traR C4-type zinc finger - - - 0.000000000000000000000000000000000000000000000000008571 188.0
DYD3_k127_3296954_7 LemA family K03744 - - 0.00000000000000000000000000000000000009644 149.0
DYD3_k127_3296954_8 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.00002074 47.0
DYD3_k127_3320564_0 SPTR Demethylmenaquinone methyltransferase-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001357 538.0
DYD3_k127_3320564_1 Hydrolase Family 16 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002647 521.0
DYD3_k127_3320564_2 SMP-30/Gluconolaconase/LRE-like region K01053 - 3.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009645 494.0
DYD3_k127_3320564_3 Belongs to the glycosyl hydrolase 28 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004486 342.0
DYD3_k127_3320564_4 Pfam:Pyridox_oxidase K07006 - - 0.00000000000000000000000000000000000000000000000000000000000000001173 231.0
DYD3_k127_3320564_5 COGs COG2731 Beta-galactosidase beta subunit - - - 0.000000000000000000000000000000000000000000000000000000000003472 214.0
DYD3_k127_3381432_0 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000007547 206.0
DYD3_k127_3381432_1 WD40 repeats - - - 0.00000000000000000000000000000982 134.0
DYD3_k127_3381432_2 - - - - 0.0000000000001184 78.0
DYD3_k127_3381432_3 Protein of unknown function (DUF1579) - - - 0.000000003201 64.0
DYD3_k127_3381432_4 Lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.000001995 50.0
DYD3_k127_3391052_0 AsmA-like C-terminal region - - - 1.694e-302 951.0
DYD3_k127_3391052_1 ABC transporter transmembrane region K18889 - - 1.024e-258 809.0
DYD3_k127_3391052_10 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase K03772,K03773 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000001671 208.0
DYD3_k127_3391052_11 mannose-6-phosphate isomerase - - - 0.00000000000000000000000000000000000000000000000007794 180.0
DYD3_k127_3391052_12 Protein of unknown function (DUF1573) - - - 0.00000000000000000000000000000000000000000000009995 174.0
DYD3_k127_3391052_13 YtxH-like protein - - - 0.00000000000000000000000000002965 119.0
DYD3_k127_3391052_14 START domain - - - 0.0000000000000000000000007745 111.0
DYD3_k127_3391052_2 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008842 579.0
DYD3_k127_3391052_3 MatE - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000477 519.0
DYD3_k127_3391052_4 PDZ domain (Also known as DHR or GLGF) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002437 507.0
DYD3_k127_3391052_5 TonB-dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002972 486.0
DYD3_k127_3391052_6 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009886 459.0
DYD3_k127_3391052_7 PUA domain containing protein K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009363 445.0
DYD3_k127_3391052_8 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001737 296.0
DYD3_k127_3391052_9 O-methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001822 264.0
DYD3_k127_3393731_0 PFAM D-galactarate dehydratase Altronate hydrolase K01685 - 4.2.1.7 2.04e-266 828.0
DYD3_k127_3393731_1 Sulfatase-modifying factor enzyme 1 K13444 - 1.8.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 432.0
DYD3_k127_3393731_2 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002441 301.0
DYD3_k127_3393731_3 Transposase IS200 like - - - 0.00000000000000000000000000000000000000000000000000000000005557 211.0
DYD3_k127_3393731_4 PFAM Signal transduction histidine kinase, internal region - - - 0.0005251 48.0
DYD3_k127_3399869_0 Arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 2.296e-257 805.0
DYD3_k127_3399869_1 Cystathionine beta-synthase K01697 - 4.2.1.22 1.396e-235 734.0
DYD3_k127_3399869_10 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.00000000000000000000000000000000000000000000000000000001895 200.0
DYD3_k127_3399869_11 PFAM Outer membrane protein, OmpA MotB, C-terminal - - - 0.00000000000000000000000000000000000000000000000003948 192.0
DYD3_k127_3399869_12 EVE domain - - - 0.00000000000000000000000000000000000003106 146.0
DYD3_k127_3399869_13 Tellurite resistance protein TerB - - - 0.0000000000000000000000000000000000004649 143.0
DYD3_k127_3399869_14 DoxX K15977 - - 0.00000000000000000000000000000000001711 139.0
DYD3_k127_3399869_2 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002493 559.0
DYD3_k127_3399869_3 Membrane-bound serine protease (ClpP class) K07403 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004899 535.0
DYD3_k127_3399869_4 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005008 288.0
DYD3_k127_3399869_5 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000149 292.0
DYD3_k127_3399869_6 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) K06169 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004218 271.0
DYD3_k127_3399869_7 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.00000000000000000000000000000000000000000000000000000000000000005319 226.0
DYD3_k127_3399869_8 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.00000000000000000000000000000000000000000000000000000000000004189 217.0
DYD3_k127_3399869_9 PFAM LysM domain - - - 0.0000000000000000000000000000000000000000000000000000000000001161 225.0
DYD3_k127_3403452_0 WD40-like Beta Propeller Repeat - - - 4.622e-216 681.0
DYD3_k127_3403452_1 Protein of unknown function (DUF3352) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006467 444.0
DYD3_k127_3403452_2 Phosphate acyltransferases - - - 0.0000000000000000000000000000000000000000000000000000000000004819 224.0
DYD3_k127_3403452_3 ABC transporter - - - 0.0000000000000000000000000000000000000000000000000000002434 202.0
DYD3_k127_3403452_4 - - - - 0.00000000000000000000000000000000000000002326 161.0
DYD3_k127_3403452_5 - - - - 0.000000000000000000000000000000001853 143.0
DYD3_k127_3403452_6 - - - - 0.000000000002119 78.0
DYD3_k127_3422089_0 esterase - - - 1.454e-282 876.0
DYD3_k127_3422089_1 MacB-like periplasmic core domain K02004 - - 2.764e-267 845.0
DYD3_k127_3422089_10 Domain of unknown function (DUF4287) - - - 0.00000000000009991 72.0
DYD3_k127_3422089_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 7.582e-214 669.0
DYD3_k127_3422089_3 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003644 414.0
DYD3_k127_3422089_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000019 285.0
DYD3_k127_3422089_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000001946 192.0
DYD3_k127_3422089_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.00000000000000000000000000000000000000000000002938 175.0
DYD3_k127_3422089_7 23S rRNA-intervening sequence protein - - - 0.000000000000000000000000000000005086 131.0
DYD3_k127_3422089_8 - - - - 0.000000000000000000000000000000006094 130.0
DYD3_k127_3452448_0 PQQ-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 460.0
DYD3_k127_3452448_1 TIGRFAM DNA protecting protein DprA K04096 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 397.0
DYD3_k127_3452448_2 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005775 396.0
DYD3_k127_3452448_3 Cell wall formation K00075 - 1.3.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005084 353.0
DYD3_k127_3452448_4 Isopropylmalate homocitrate citramalate synthase K01640 - 4.1.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003146 342.0
DYD3_k127_3452448_5 helix_turn_helix, mercury resistance - - - 0.00000000000000000000000000000000000000000000004377 171.0
DYD3_k127_3452448_6 PFAM Peptidase family M23 - - - 0.00000000000000000000000000006268 117.0
DYD3_k127_3452448_7 Methylase involved in ubiquinone menaquinone biosynthesis - - - 0.00000001073 57.0
DYD3_k127_3452971_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 2.253e-302 942.0
DYD3_k127_3452971_1 C-terminal domain of CHU protein family - - - 7.336e-213 690.0
DYD3_k127_3452971_2 - - - - 0.00000000000000000142 86.0
DYD3_k127_3452971_3 - - - - 0.000008385 50.0
DYD3_k127_34535_0 NMT1-like family K15576 - - 1.206e-234 733.0
DYD3_k127_34535_1 Alginate export - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000473 422.0
DYD3_k127_3470307_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000003003 244.0
DYD3_k127_3470307_1 - - - - 0.000000000000000000000000000000000705 138.0
DYD3_k127_3470307_2 - - - - 0.00000000000001925 76.0
DYD3_k127_3470307_3 - - - - 0.000000807 61.0
DYD3_k127_3484862_0 Cell division protein FtsI penicillin-binding protein 2 K03587 - 3.4.16.4 1.894e-308 959.0
DYD3_k127_3484862_1 Peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009999 526.0
DYD3_k127_3484862_2 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005764 394.0
DYD3_k127_3484862_3 Belongs to the MraZ family K03925 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000003813 214.0
DYD3_k127_3484862_4 - - - - 0.0000000000000000000000000000002124 127.0
DYD3_k127_3509711_0 Transketolase, pyrimidine binding domain K11381 - 1.2.4.4 0.0 1080.0
DYD3_k127_3509711_1 Outer membrane protein protective antigen OMA87 - - - 4.865e-251 798.0
DYD3_k127_3509711_10 - - - - 0.0000000000103 69.0
DYD3_k127_3509711_2 Dipeptidyl peptidase IV (DPP IV) N-terminal region K01278 - 3.4.14.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006451 526.0
DYD3_k127_3509711_3 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA K00784 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0031123,GO:0034414,GO:0034470,GO:0034641,GO:0034660,GO:0042779,GO:0042780,GO:0042781,GO:0043170,GO:0043628,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1905267 3.1.26.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000192 336.0
DYD3_k127_3509711_4 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008464 331.0
DYD3_k127_3509711_5 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007905 287.0
DYD3_k127_3509711_6 PFAM SpoU rRNA Methylase family K03437 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000893 250.0
DYD3_k127_3509711_7 PFAM peptidase S45 penicillin amidase K01434 - 3.5.1.11 0.000000000000000000000000000000000000000000000000000000008688 206.0
DYD3_k127_3509711_8 Ndr family K01259 - 3.4.11.5 0.00000000000000000000000000000000000000000000000000007591 199.0
DYD3_k127_3541753_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002388 500.0
DYD3_k127_3541753_1 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 402.0
DYD3_k127_3541753_10 Thioredoxin-like - - - 0.000000000000000000000000000000000001093 146.0
DYD3_k127_3541753_11 Tellurite resistance protein TerB - - - 0.00000000000000000000000000000000000746 142.0
DYD3_k127_3541753_12 - - - - 0.00000000000000000516 91.0
DYD3_k127_3541753_13 - - - - 0.000002132 59.0
DYD3_k127_3541753_2 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009605 367.0
DYD3_k127_3541753_3 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002667 366.0
DYD3_k127_3541753_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002081 278.0
DYD3_k127_3541753_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005178 262.0
DYD3_k127_3541753_7 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005198 264.0
DYD3_k127_3541753_8 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000006142 175.0
DYD3_k127_3541753_9 - - - - 0.0000000000000000000000000000000000000000002167 164.0
DYD3_k127_357535_0 exo-alpha-(2->6)-sialidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007593 482.0
DYD3_k127_357535_1 in asymptomatic bacteriuria E. coli strains 83972 and VR50, the ygiD gene is upregulated during biofilm formation in urine K15777 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005784 423.0
DYD3_k127_357535_2 PhoD-like phosphatase K01113 - 3.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 409.0
DYD3_k127_357535_3 Amino acid permease K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 383.0
DYD3_k127_357535_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000005562 225.0
DYD3_k127_3577624_0 Sortilin, neurotensin receptor 3, - - - 0.0 1387.0
DYD3_k127_3577624_1 TIGRFAM DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007697 364.0
DYD3_k127_3577624_2 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004105 280.0
DYD3_k127_3577624_3 Rhomboid family - - - 0.000000000000000000000000000000000000000000000007722 177.0
DYD3_k127_3577624_4 Transport and Golgi organisation 2 - - - 0.0000000000000000001012 90.0
DYD3_k127_3577624_5 Protein of unknown function (DUF433) - - - 0.000000003482 59.0
DYD3_k127_3580797_0 efflux transmembrane transporter activity K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000268 601.0
DYD3_k127_3580797_1 Belongs to the glycosyl hydrolase 28 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005672 411.0
DYD3_k127_3580797_2 7TM diverse intracellular signalling - - - 0.000000000000000000000000000000000000000000000717 173.0
DYD3_k127_3580797_3 Histidine Phosphotransfer domain K07678 - 2.7.13.3 0.00002681 51.0
DYD3_k127_3595380_0 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 - 1.11.1.21 0.0 1215.0
DYD3_k127_3595380_1 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.0000000000000000000000000000000000000000000000000000000007819 211.0
DYD3_k127_3595380_2 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000000000000000000000006271 198.0
DYD3_k127_3595380_3 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000000000000000000000000000000000000002344 160.0
DYD3_k127_3612217_0 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005507 358.0
DYD3_k127_3612217_1 CarboxypepD_reg-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001649 244.0
DYD3_k127_3612217_2 arsR family K03892 - - 0.000000000000000000000000000000000000309 143.0
DYD3_k127_3629859_0 Required for chromosome condensation and partitioning K03529 - - 0.0 1459.0
DYD3_k127_3629859_1 PFAM TonB-dependent Receptor Plug Domain - - - 0.0 1137.0
DYD3_k127_3647884_0 Belongs to the ClpA ClpB family K03696 - - 0.0 1247.0
DYD3_k127_3647884_1 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003774 410.0
DYD3_k127_3647884_2 TIGRFAM YihY family protein (not ribonuclease BN) K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009573 346.0
DYD3_k127_3647884_3 Belongs to the SUA5 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001 248.0
DYD3_k127_3647884_4 TIGRFAM acyl-CoA thioester hydrolase, YbgC YbaW family K07107 - - 0.0000000000000000000000000000000000000000000000000000000004468 204.0
DYD3_k127_3647884_5 PFAM WbqC-like protein family - - - 0.00000000000000000000000000000000000000000000003456 176.0
DYD3_k127_3650717_0 Thiazole biosynthesis protein ThiG K00459 - 1.13.12.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000234 293.0
DYD3_k127_3650717_1 methyltransferase - - - 0.0000000000000000000000000000000000001745 150.0
DYD3_k127_3650717_2 Putative beta-barrel porin-2, OmpL-like. bbp2 - - - 0.0000000000000000000007461 102.0
DYD3_k127_3675258_0 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 315.0
DYD3_k127_3675258_1 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000022 268.0
DYD3_k127_3675258_2 Protein of unknown function (DUF1428) - - - 0.0000000000000000000000000001959 118.0
DYD3_k127_3675794_0 Phosphoadenosine phosphosulfate reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005912 313.0
DYD3_k127_3675794_1 NUMOD4 motif - - - 0.000000000000000001165 97.0
DYD3_k127_3675794_2 - - - - 0.000000000000000008223 86.0
DYD3_k127_3675794_3 YopX protein - - - 0.000000001735 65.0
DYD3_k127_3675794_4 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.00009894 49.0
DYD3_k127_3675794_6 - - - - 0.0005777 48.0
DYD3_k127_3675794_7 two component, sigma54 specific, transcriptional regulator, Fis family K07713 - - 0.000729 44.0
DYD3_k127_3678234_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 4.856e-276 856.0
DYD3_k127_3678234_1 PFAM Type III restriction enzyme, res subunit - - - 4.91e-196 630.0
DYD3_k127_3678234_10 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.00000000000000000000000000000000000000001032 154.0
DYD3_k127_3678234_11 Curli production assembly/transport component CsgG - - - 0.00000000000000000000000000000000000006466 163.0
DYD3_k127_3678234_12 Domain of unknown function (DU1801) - - - 0.000000000000000000000001047 107.0
DYD3_k127_3678234_13 - - - - 0.00000000000000000000003019 110.0
DYD3_k127_3678234_2 CheY-like receiver AAA-type ATPase and DNA-binding domains - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002614 528.0
DYD3_k127_3678234_3 PFAM Succinylglutamate desuccinylase Aspartoacylase family K06987 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003734 437.0
DYD3_k127_3678234_4 Protein of unknown function (DUF3179) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 419.0
DYD3_k127_3678234_5 PFAM Aminotransferase class I and II K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002137 410.0
DYD3_k127_3678234_6 UbiA prenyltransferase family K02548 - 2.5.1.74 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 359.0
DYD3_k127_3678234_7 PFAM Acyl-protein synthetase, LuxE - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001918 331.0
DYD3_k127_3678234_8 Auxin Efflux Carrier K07088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002996 318.0
DYD3_k127_3678234_9 Phosphate acyltransferases K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001085 272.0
DYD3_k127_3705304_0 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 565.0
DYD3_k127_3705304_1 COGs COG1975 Xanthine and CO dehydrogenase maturation factor XdhC CoxF family K07402 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004813 298.0
DYD3_k127_3705304_2 Belongs to the ComB family K05979 - 3.1.3.71 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006194 275.0
DYD3_k127_3705304_3 ThiS family - - - 0.000000000000000000000003748 104.0
DYD3_k127_3705304_4 MazG nucleotide pyrophosphohydrolase domain protein - - - 0.000000009564 56.0
DYD3_k127_3706849_0 PFAM TonB-dependent Receptor Plug - - - 5.379e-283 889.0
DYD3_k127_3706849_1 malate quinone oxidoreductase K00116 - 1.1.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000468 614.0
DYD3_k127_3706849_10 Barrel-sandwich domain of CusB or HlyD membrane-fusion K01993 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 338.0
DYD3_k127_3706849_11 proteinase inhibitor I4 serpin K13963 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004402 304.0
DYD3_k127_3706849_12 RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000000000000000000000000000000000000002162 214.0
DYD3_k127_3706849_13 Domain of unknown function (DUF4974) - - - 0.000000000000000000000000000000000000000000000005978 184.0
DYD3_k127_3706849_14 thioesterase K07107 - - 0.000000000000000000000000000000000000000002699 159.0
DYD3_k127_3706849_15 PFAM Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000003605 158.0
DYD3_k127_3706849_16 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000001199 123.0
DYD3_k127_3706849_2 Serine aminopeptidase, S33 K01259 - 3.4.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009979 506.0
DYD3_k127_3706849_3 FtsX-like permease family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 503.0
DYD3_k127_3706849_4 AMP-dependent synthetase K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001784 475.0
DYD3_k127_3706849_5 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000285 405.0
DYD3_k127_3706849_6 PFAM Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 409.0
DYD3_k127_3706849_7 Serine aminopeptidase, S33 K06889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006071 379.0
DYD3_k127_3706849_8 Type ii and iii secretion system protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002969 394.0
DYD3_k127_3706849_9 COGs COG1131 ABC-type multidrug transport system ATPase component K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002447 369.0
DYD3_k127_3709524_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007223 571.0
DYD3_k127_3709524_1 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 482.0
DYD3_k127_3709524_2 transcriptional regulator K04761 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002142 330.0
DYD3_k127_3709524_3 RES domain protein - - - 0.0000000000000000000001531 102.0
DYD3_k127_3709524_4 Protein of unknown function (DUF2384) - - - 0.000000000000000000117 93.0
DYD3_k127_3723943_0 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 3.34e-208 653.0
DYD3_k127_3723943_1 Domain of unknown function (DU1801) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001852 242.0
DYD3_k127_3723943_2 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K01911 - 6.2.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000224 252.0
DYD3_k127_3723943_3 - - - - 0.000000000000000000000000000000000000000000000000000000009244 203.0
DYD3_k127_3723943_4 Domain of unknown function DUF302 - - - 0.00000000000000000000000000000000000000000000000000001629 191.0
DYD3_k127_3723943_5 Tellurite resistance protein TerB - - - 0.00000000001711 66.0
DYD3_k127_3723943_6 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000002459 62.0
DYD3_k127_3751693_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 1.63e-228 712.0
DYD3_k127_3751693_1 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009353 327.0
DYD3_k127_3751693_2 Universal stress protein family - - - 0.00000000000000000000000000000000000000000000000000000000000001274 226.0
DYD3_k127_3751693_3 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.0000000000000000000000000000000000000000000000000000000000003799 219.0
DYD3_k127_3751693_4 Transcriptional regulator, AraC family - - - 0.00000000000000000000000000000000000000000000000000000000009677 215.0
DYD3_k127_3751693_5 Acyl CoA binding protein - - - 0.00000000000000000005997 92.0
DYD3_k127_3751693_6 PFAM SPFH domain Band 7 family - - - 0.00000000000159 67.0
DYD3_k127_3764603_0 Involved in the tonB-independent uptake of proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002817 618.0
DYD3_k127_3764603_1 ABC transporter substrate-binding component GldG K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002592 589.0
DYD3_k127_3764603_10 Sodium/calcium exchanger protein K07301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004079 318.0
DYD3_k127_3764603_12 PFAM Protein kinase domain - - - 0.00000000000000000000000000000000000000000000004713 179.0
DYD3_k127_3764603_13 - - - - 0.0000000000000000000000003732 117.0
DYD3_k127_3764603_14 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000001648 89.0
DYD3_k127_3764603_2 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009471 563.0
DYD3_k127_3764603_3 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 484.0
DYD3_k127_3764603_4 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002926 447.0
DYD3_k127_3764603_5 PFAM von Willebrand factor type A K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004653 391.0
DYD3_k127_3764603_6 TIGRFAM Gliding motility-associated ABC transporter ATP-binding subunit GldA K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 389.0
DYD3_k127_3764603_7 Sodium/calcium exchanger protein K07301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 340.0
DYD3_k127_3764603_8 TIGRFAM Gliding motility-associated ABC transporter permease protein GldF K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002099 326.0
DYD3_k127_3764603_9 Mediates influx of magnesium ions K03284 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003267 331.0
DYD3_k127_3769266_0 ABC-2 type transporter K21397 - - 1.012e-311 968.0
DYD3_k127_3769266_1 - - - - 0.000000000000000001759 87.0
DYD3_k127_3789935_0 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain - - - 3.871e-250 775.0
DYD3_k127_3789935_1 Hydrolases of the alpha beta superfamily K06889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007412 432.0
DYD3_k127_3789935_2 - K11477 - - 0.0000000000000000000000009479 108.0
DYD3_k127_3789935_3 C-terminal domain of CHU protein family - - - 0.00000000000000000000001426 117.0
DYD3_k127_3789935_5 C-terminal domain of CHU protein family - - - 0.000000000003018 80.0
DYD3_k127_3808706_0 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000002103 263.0
DYD3_k127_3808706_1 ThiS family K03636 - - 0.000000000001815 71.0
DYD3_k127_381220_0 COGs COG2382 Enterochelin esterase K07214 - - 1.913e-312 968.0
DYD3_k127_381220_1 PFAM Alcohol dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004675 496.0
DYD3_k127_381220_2 PFAM NUDIX hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006242 327.0
DYD3_k127_381220_3 TonB-linked outer membrane protein, SusC RagA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 328.0
DYD3_k127_3826117_0 lysine 2,3-aminomutase K01843 - 5.4.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009476 596.0
DYD3_k127_3826117_1 Glycogen debranching enzyme, glucanotransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000515 577.0
DYD3_k127_3826117_2 symporter activity K03307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001937 538.0
DYD3_k127_3826117_3 Mechanosensitive ion channel K16052 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002658 388.0
DYD3_k127_3826117_4 beta-lysine N-acetyltransferase K21935 - 2.3.1.264 0.00000000000000000000000000000000000000000000000000000000000000001673 233.0
DYD3_k127_3826117_5 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000000000000000000000000000000006186 145.0
DYD3_k127_3826117_6 TIGRFAM Acidobacterial duplicated orphan permease - - - 0.0000000000001006 72.0
DYD3_k127_383730_0 phosphate transporter K03306 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007528 545.0
DYD3_k127_383730_1 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003196 250.0
DYD3_k127_383730_2 peroxiredoxin activity K03564,K07638 - 1.11.1.15,2.7.13.3 0.0000000000000000000000000000000000000000000000000005705 191.0
DYD3_k127_384123_0 Deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 - 3.1.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004014 524.0
DYD3_k127_384123_1 Uncharacterized alpha/beta hydrolase domain (DUF2235) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003568 403.0
DYD3_k127_384123_2 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000005641 233.0
DYD3_k127_384123_3 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000003126 217.0
DYD3_k127_384123_4 Histidine kinase-like ATPases - - - 0.0000000000000000000000000000000000000005068 159.0
DYD3_k127_384123_5 Transcriptional regulatory protein, C terminal - - - 0.0001089 49.0
DYD3_k127_384758_0 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000835 580.0
DYD3_k127_384758_1 SpoU rRNA Methylase family - - - 0.00000000000000000000000000000000000000000000000000000000000000009572 225.0
DYD3_k127_384758_2 Pfam GH3 auxin-responsive promoter - - - 0.000000000000000000002608 94.0
DYD3_k127_38533_0 PFAM FAD dependent oxidoreductase K15736 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001953 571.0
DYD3_k127_38533_1 Protein of unknown function (DUF1624) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003942 333.0
DYD3_k127_38533_2 cellular modified histidine biosynthetic process K18802 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 316.0
DYD3_k127_38533_3 DNA-3-methyladenine K01247,K13529 - 3.2.2.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 292.0
DYD3_k127_38533_4 Putative esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002215 281.0
DYD3_k127_38533_5 Acetyltransferase (GNAT) domain K09994 - - 0.000000000000000000000000271 111.0
DYD3_k127_38533_6 TIGRFAM gliding motility-associated lipoprotein GldD - - - 0.0000000000000000099 85.0
DYD3_k127_3871750_0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 - 1.8.1.4 1.112e-230 721.0
DYD3_k127_3871750_1 PFAM PAP2 superfamily K19302 GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009605,GO:0009607,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019637,GO:0042578,GO:0043207,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0046467,GO:0046493,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0051832,GO:0051834,GO:0052173,GO:0052200,GO:0071704,GO:0075136,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 3.6.1.27 0.000000000000000001425 88.0
DYD3_k127_3871750_2 Domain of unknown function (DUF4136) - - - 0.00000508 54.0
DYD3_k127_3877431_0 Two component regulator three Y domain protein - - - 0.0 1271.0
DYD3_k127_3877431_1 7TM diverse intracellular signalling - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009012 459.0
DYD3_k127_3877431_3 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000002291 187.0
DYD3_k127_3877431_4 alginic acid biosynthetic process - - - 0.00000000000000000000000000000000000117 157.0
DYD3_k127_3877431_5 Histidine kinase K20972,K20973 - 2.7.13.3 0.0000000000000000000000000000001365 130.0
DYD3_k127_3877431_6 - - - - 0.000000000000000000000000005243 118.0
DYD3_k127_3877431_7 Transposase and inactivated derivatives K07497 - - 0.0000000000008271 77.0
DYD3_k127_3901992_0 alcohol dehydrogenase K17760 - 1.1.9.1 4.54e-217 694.0
DYD3_k127_3901992_1 FtsX-like permease family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000479 417.0
DYD3_k127_3901992_2 TonB-dependent Receptor Plug Domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007116 349.0
DYD3_k127_3901992_3 PFAM SCO1 SenC K07152 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003414 243.0
DYD3_k127_3901992_4 YHYH protein - - - 0.000000000000000000000000000000000000000000000001298 174.0
DYD3_k127_3901992_5 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000000000000006802 177.0
DYD3_k127_3901992_6 FecR protein - - - 0.0000000000000000000000000000000000000008481 159.0
DYD3_k127_3901992_7 PFAM MORN repeat variant - - - 0.00000000000000000000000000000000000005126 150.0
DYD3_k127_3901992_8 - - - - 0.00000000000000008817 84.0
DYD3_k127_3907535_0 chitinase - - - 0.0 1512.0
DYD3_k127_3907535_1 Fibronectin type 3 domain - - - 0.000000000000000000000000000000000000000000000000000001117 203.0
DYD3_k127_3907535_2 Fibronectin type 3 domain - - - 0.000000000000000000000000000000000000000000000004553 180.0
DYD3_k127_3908384_0 CheY-like receiver AAA-type ATPase and DNA-binding domains - - - 4.527e-247 771.0
DYD3_k127_3908384_1 SMART Metal-dependent phosphohydrolase, HD region K06885 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 509.0
DYD3_k127_3908384_2 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000009589 252.0
DYD3_k127_3926931_0 Response regulator of the LytR AlgR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001164 273.0
DYD3_k127_3926931_1 PFAM histidine kinase internal region - - - 0.000000000000000000000000000000000000000000000000000004334 196.0
DYD3_k127_3926931_2 lactoylglutathione lyase activity - - - 0.00000000000000000009195 90.0
DYD3_k127_3933383_0 COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL CutL homologs K07303 - 1.3.99.16 0.0 1124.0
DYD3_k127_3933383_1 Transport of potassium into the cell K03549 - - 2.359e-224 712.0
DYD3_k127_3933383_10 2Fe-2S -binding domain K07302 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001453 270.0
DYD3_k127_3933383_11 LytTr DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001288 258.0
DYD3_k127_3933383_12 Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000006472 258.0
DYD3_k127_3933383_13 PFAM Response regulator receiver domain K07667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001227 246.0
DYD3_k127_3933383_14 Dioxygenase K00449 - 1.13.11.3 0.00000000000000000000000000000000000000000000000000000000000000000003195 237.0
DYD3_k127_3933383_15 Universal stress protein - - - 0.000000000000000000000000000000000000000000000000000000000000000001865 236.0
DYD3_k127_3933383_16 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000004244 226.0
DYD3_k127_3933383_17 - - - - 0.000000000000000000000000000000000000000000000000000000000001854 219.0
DYD3_k127_3933383_18 - - - - 0.000000000000000000000000000000000000000000000000000000000006733 218.0
DYD3_k127_3933383_19 PFAM PASTA domain K01921,K08884,K12132 - 2.7.11.1,6.3.2.4 0.00000000000000000000000000000000000000000000000000001076 196.0
DYD3_k127_3933383_2 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 3.663e-213 687.0
DYD3_k127_3933383_20 Domain of unknown function (DUF4296) - - - 0.0000000000000004847 85.0
DYD3_k127_3933383_21 copper resistance K07233,K07798,K14588 - - 0.0000000002376 66.0
DYD3_k127_3933383_22 - - - - 0.0002336 46.0
DYD3_k127_3933383_3 Sulfate permease family - - - 4.839e-196 623.0
DYD3_k127_3933383_4 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004906 588.0
DYD3_k127_3933383_5 PFAM von Willebrand factor type A K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003847 490.0
DYD3_k127_3933383_6 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008635 404.0
DYD3_k127_3933383_7 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008414 381.0
DYD3_k127_3933383_8 Sugar (and other) transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004819 335.0
DYD3_k127_3933383_9 Domain of unknown function (DUF4118) K07646 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008195 334.0
DYD3_k127_3940776_0 serine-type peptidase activity K08676 GO:0003674,GO:0003824,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0043170,GO:0044238,GO:0070011,GO:0071704,GO:0140096,GO:1901564 - 4.107e-314 995.0
DYD3_k127_3940776_1 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002165 585.0
DYD3_k127_3940776_10 - - - - 0.00009106 54.0
DYD3_k127_3940776_2 Outer membrane cobalamin receptor protein K16092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009963 495.0
DYD3_k127_3940776_3 N-formylglutamate deformylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002788 298.0
DYD3_k127_3940776_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003588 294.0
DYD3_k127_3940776_5 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002146 254.0
DYD3_k127_3940776_6 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000000000000000000000000000000000000000000000000000000000000000007869 231.0
DYD3_k127_3940776_7 2',5' RNA ligase - - - 0.000000000000000000000000000000000000000000000008565 177.0
DYD3_k127_3940776_8 Domain of unknown function (DUF4440) - - - 0.000000008289 62.0
DYD3_k127_3940776_9 K+ potassium transporter K03549 - - 0.00003726 47.0
DYD3_k127_3955620_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 GO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.5 0.0 1525.0
DYD3_k127_3955620_1 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.00000000000000000000000000000000000000000000000000000000000000008678 231.0
DYD3_k127_3955620_2 GAF domain-containing protein K08968 - 1.8.4.14 0.000000000000000000000000000000000000000000000000000715 186.0
DYD3_k127_3955620_3 methyltransferase - - - 0.000000000000000367 78.0
DYD3_k127_3955620_4 alcohol dehydrogenase K13953 - 1.1.1.1 0.0000001319 53.0
DYD3_k127_3967614_0 hydrogen-translocating pyrophosphatase activity K15987 - 3.6.1.1 0.0 1022.0
DYD3_k127_3967614_1 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 314.0
DYD3_k127_3967614_10 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K11928 - - 0.00000000000000008766 82.0
DYD3_k127_3967614_2 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009544 314.0
DYD3_k127_3967614_3 Belongs to the ABC-4 integral membrane protein family. FtsX subfamily K09811 GO:0005575,GO:0005618,GO:0005623,GO:0006928,GO:0008150,GO:0009274,GO:0009276,GO:0009605,GO:0009607,GO:0009615,GO:0009987,GO:0030312,GO:0030313,GO:0031975,GO:0040011,GO:0043207,GO:0044464,GO:0048870,GO:0050896,GO:0051179,GO:0051301,GO:0051674,GO:0051704,GO:0051707,GO:0071944,GO:0071976 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003622 288.0
DYD3_k127_3967614_4 Sigma-70 region 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000662 281.0
DYD3_k127_3967614_5 PFAM thioesterase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007086 263.0
DYD3_k127_3967614_6 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000005773 260.0
DYD3_k127_3967614_7 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000000004782 248.0
DYD3_k127_3967614_9 Protein of unknown function (DUF3098) - - - 0.000000000000000000007593 96.0
DYD3_k127_3970111_0 PFAM glycosyl transferase family 9 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004557 331.0
DYD3_k127_3970111_1 ABC-type polysaccharide polyol phosphate transport system ATPase component K09691 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 301.0
DYD3_k127_3970111_2 PFAM ABC-2 type transporter K09690 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003862 282.0
DYD3_k127_3970111_3 Protein of unknown function (DUF4254) - - - 0.00000000000000000000000000000000000000000000000000000000008463 207.0
DYD3_k127_3970111_4 membrane protein (DUF2207) - - - 0.00000000000000000000001268 103.0
DYD3_k127_3970111_5 Protein of unknown function (DUF4254) - - - 0.00000000000172 68.0
DYD3_k127_4003972_0 SMP-30/Gluconolaconase/LRE-like region K01053 - 3.1.1.17 0.0 1016.0
DYD3_k127_4003972_1 Belongs to the glycosyl hydrolase 43 family - - - 5.711e-265 823.0
DYD3_k127_4003972_2 PFAM glycoside hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007357 246.0
DYD3_k127_4003972_3 lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000000000000000000000000000000000000007275 222.0
DYD3_k127_4008794_0 MacB-like periplasmic core domain - - - 8.013e-276 873.0
DYD3_k127_4008794_1 Penicillin-binding protein, dimerisation domain K05515 - 3.4.16.4 1.685e-258 809.0
DYD3_k127_4008794_10 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002527 455.0
DYD3_k127_4008794_11 GlcNAc-PI de-N-acetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 425.0
DYD3_k127_4008794_12 Fatty acid hydroxylase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003346 409.0
DYD3_k127_4008794_13 Putative esterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002989 340.0
DYD3_k127_4008794_14 thymidine kinase K00857 GO:0003674,GO:0003824,GO:0004797,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006259,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009157,GO:0009162,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019136,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046104,GO:0046125,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:0090407,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003261 300.0
DYD3_k127_4008794_15 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 K01560,K07025 - 3.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000002306 263.0
DYD3_k127_4008794_16 Putative esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009711 266.0
DYD3_k127_4008794_17 Involved in formation and maintenance of cell shape K03570 - - 0.0000000000000000000000000000000000000000000000000000000000000000000016 244.0
DYD3_k127_4008794_18 Carbohydrate family 9 binding domain-like - - - 0.0000000000000000000000000000000000000000000000000000000000000008784 226.0
DYD3_k127_4008794_19 - - - - 0.000000000000000000000000000000000000000000000000000000001582 213.0
DYD3_k127_4008794_2 MacB-like periplasmic core domain K02004 - - 1.099e-243 781.0
DYD3_k127_4008794_20 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000001749 198.0
DYD3_k127_4008794_21 negative regulation of transcription, DNA-templated - - - 0.000000000000000000000000000000000000000000000006263 173.0
DYD3_k127_4008794_22 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000000000000000000001975 164.0
DYD3_k127_4008794_23 Methyltransferase FkbM domain - - - 0.000000000000000000000000000000000000006242 155.0
DYD3_k127_4008794_24 rod shape-determining protein MreD - - - 0.0000000000000000000000000000000000001073 147.0
DYD3_k127_4008794_25 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000003748 132.0
DYD3_k127_4008794_26 TIGRFAM bacillithiol system protein YtxJ - - - 0.00000000000000000000000000000000137 133.0
DYD3_k127_4008794_27 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.0000000000000000000000000003436 113.0
DYD3_k127_4008794_28 Domain of unknown function (DUF4295) - - - 0.00000000000000007448 80.0
DYD3_k127_4008794_29 FtsX-like permease family K02004 - - 0.00000000000001146 74.0
DYD3_k127_4008794_3 MacB-like periplasmic core domain - - - 7.082e-238 763.0
DYD3_k127_4008794_30 Domain of unknown function (DUF3368) - - - 0.00000000000006437 78.0
DYD3_k127_4008794_31 FtsX-like permease family - - - 0.00000000008532 63.0
DYD3_k127_4008794_32 Uncharacterised protein family (UPF0175) - - - 0.0002299 47.0
DYD3_k127_4008794_4 FtsX-like permease family - - - 1.419e-219 709.0
DYD3_k127_4008794_5 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 1.608e-195 612.0
DYD3_k127_4008794_6 permease K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003417 620.0
DYD3_k127_4008794_7 Pyridoxal-dependent decarboxylase conserved domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008188 535.0
DYD3_k127_4008794_8 Belongs to the SEDS family K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002728 518.0
DYD3_k127_4008794_9 Glutathione synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008432 494.0
DYD3_k127_4047073_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 586.0
DYD3_k127_4047073_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.0000000000000000000000000000000000000000000662 164.0
DYD3_k127_4066333_0 TonB-dependent Receptor Plug Domain - - - 0.0 1206.0
DYD3_k127_4066333_1 Belongs to the glycosyl hydrolase 3 family K05349 - 3.2.1.21 0.0 1061.0
DYD3_k127_4066333_10 Reduction of activated sulfate into sulfite K00390 - 1.8.4.10,1.8.4.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000287 260.0
DYD3_k127_4066333_2 Ragb susd K21572 - - 2.897e-220 692.0
DYD3_k127_4066333_3 protein conserved in bacteria - - - 2.912e-213 669.0
DYD3_k127_4066333_4 Putative glucoamylase - - - 1.352e-209 669.0
DYD3_k127_4066333_5 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 581.0
DYD3_k127_4066333_6 7TMR-DISM extracellular 2 K20971 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005459 565.0
DYD3_k127_4066333_7 Glycosyl hydrolases family 2, TIM barrel domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006626 551.0
DYD3_k127_4066333_8 S1 P1 nuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002805 363.0
DYD3_k127_4066333_9 Concanavalin A-like lectin/glucanases superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005548 284.0
DYD3_k127_4066428_0 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 1.844e-207 655.0
DYD3_k127_4066428_1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 2.74e-201 632.0
DYD3_k127_4066428_2 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000219 519.0
DYD3_k127_4066428_3 23S rRNA-intervening sequence protein - - - 0.0000000000000000000000000007003 117.0
DYD3_k127_4066428_4 Cell division protein FtsI penicillin-binding protein 2 K03587 - 3.4.16.4 0.0000000000000000000000001038 108.0
DYD3_k127_4066428_5 23S rRNA-intervening sequence protein - - - 0.0000000000000001911 79.0
DYD3_k127_406739_0 Aminopeptidase N - - - 9.44e-299 932.0
DYD3_k127_406739_1 aminopeptidase - - - 3.14e-225 707.0
DYD3_k127_406739_2 Aminopeptidase N - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002516 347.0
DYD3_k127_4086280_0 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006207 590.0
DYD3_k127_4086280_1 sodium ion export across plasma membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004533 429.0
DYD3_k127_4110530_0 Belongs to the helicase family. UvrD subfamily - - - 1.184e-217 712.0
DYD3_k127_4110530_1 PD-(D/E)XK nuclease superfamily - - - 1.71e-208 680.0
DYD3_k127_4110530_2 Amino acid permease K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005617 529.0
DYD3_k127_4110530_3 protein kinase activity - - - 0.00000000000000000008997 94.0
DYD3_k127_4114977_0 FtsX-like permease family K02004 - - 1.476e-291 917.0
DYD3_k127_4114977_1 Alpha-L-rhamnosidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 370.0
DYD3_k127_4114977_2 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003823 310.0
DYD3_k127_4123868_0 CarboxypepD_reg-like domain - - - 4.395e-275 873.0
DYD3_k127_4123868_1 MacB-like periplasmic core domain K02004 - - 5.232e-245 780.0
DYD3_k127_4123868_2 metal ion transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009932 457.0
DYD3_k127_4123868_3 Belongs to the LDH2 MDH2 oxidoreductase family K08092 - 1.1.1.130 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 399.0
DYD3_k127_4123868_4 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001381 278.0
DYD3_k127_4123868_5 PIN domain - - - 0.000000000000000000005293 97.0
DYD3_k127_4123868_6 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.000000000000000006613 84.0
DYD3_k127_4123868_7 - - - - 0.0000000001216 64.0
DYD3_k127_4135987_0 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000382 519.0
DYD3_k127_4135987_1 Domain of unknown function (DUF4835) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 359.0
DYD3_k127_4135987_2 TIGRFAM Outer membrane assembly lipoprotein YfiO K05807 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001855 289.0
DYD3_k127_4135987_3 May be involved in recombinational repair of damaged DNA K03631 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001084 259.0
DYD3_k127_4135987_4 OstA-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000001335 239.0
DYD3_k127_4135987_5 - - - - 0.0000000000000000000000000000000000000000000000000000001337 202.0
DYD3_k127_4135987_6 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits - - - 0.0000000000000000000000000000000000000009521 150.0
DYD3_k127_4141547_0 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002614 630.0
DYD3_k127_4141547_1 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 615.0
DYD3_k127_4141547_2 FtsX-like permease family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004144 544.0
DYD3_k127_4141547_3 nuclease activity K02335 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001829 394.0
DYD3_k127_4141547_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000007681 228.0
DYD3_k127_4141547_5 lactoylglutathione lyase activity - - - 0.00000000000000000000000000000000000000000000000002544 182.0
DYD3_k127_4141547_6 Toxic component of a toxin-antitoxin (TA) module K07171 - - 0.000000000000000000000000000000000000000000007565 164.0
DYD3_k127_4141547_7 Domain of unknown function (DUF4870) - - - 0.0000000000000000000000000000000000001003 148.0
DYD3_k127_4141547_8 - - - - 0.0000000000000001005 82.0
DYD3_k127_4141547_9 Peptidase M56 - - - 0.0002787 48.0
DYD3_k127_4168346_0 - - - - 0.0000000000000000000000000000000000004615 142.0
DYD3_k127_4168346_1 Glycosyl hydrolase 108 - - - 0.00000000000000000000000000000000003348 141.0
DYD3_k127_4168346_2 Probable transposase K07496 - - 0.0000000000000000000000000001024 117.0
DYD3_k127_4168346_3 - - - - 0.00000000000000000007047 94.0
DYD3_k127_4168346_4 - - - - 0.0000000000000000007229 91.0
DYD3_k127_4168346_5 - - - - 0.0000003765 61.0
DYD3_k127_4201219_0 Predicted membrane protein (DUF2254) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001712 474.0
DYD3_k127_4201219_1 Belongs to the 'phage' integrase family - - - 0.00000000000000000000000000000000000000000000000000000004088 199.0
DYD3_k127_4201219_2 Sodium proton antiporter K03316 - - 0.000000000000000000000000000000000000000000000000003062 185.0
DYD3_k127_4201219_3 - - - - 0.00000000000000000000000000000001203 131.0
DYD3_k127_4201219_4 PRC-barrel domain - - - 0.000000000000000000000000000005534 121.0
DYD3_k127_4201219_5 - - - - 0.000000000000000000000000002347 115.0
DYD3_k127_4201219_6 BON domain K04065 - - 0.0000000000005427 75.0
DYD3_k127_4201219_7 - - - - 0.000000000804 61.0
DYD3_k127_4236607_0 TonB-linked outer membrane protein, SusC RagA family - - - 7.742e-268 847.0
DYD3_k127_4236607_1 RagB SusD domain protein K21572 - - 0.00000000000001364 78.0
DYD3_k127_4265403_0 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.0 1079.0
DYD3_k127_4265403_1 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001579 551.0
DYD3_k127_4265403_2 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 337.0
DYD3_k127_4265403_3 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07665 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001292 251.0
DYD3_k127_4265403_4 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000001413 242.0
DYD3_k127_4265403_5 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000007486 230.0
DYD3_k127_4265403_6 Belongs to the ompA family - - - 0.00000000000000000000000000000000009475 150.0
DYD3_k127_4265403_7 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.0000000000000000000000000000805 116.0
DYD3_k127_4282800_0 B12 binding domain K00548 - 2.1.1.13 2.145e-280 869.0
DYD3_k127_4282800_1 Homocysteine S-methyltransferase K00548 - 2.1.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 517.0
DYD3_k127_4282800_2 PFAM Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004606 367.0
DYD3_k127_4282800_3 YjbR - - - 0.00000000000000000000000000000000000000000002902 162.0
DYD3_k127_4294925_0 outer membrane protein probably involved in nutrient binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201 355.0
DYD3_k127_4294925_1 YHYH protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003478 327.0
DYD3_k127_4294925_2 PFAM SCO1 SenC K07152 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000982 257.0
DYD3_k127_4294925_3 PFAM MORN repeat variant - - - 0.00000000000000000000000000000000001577 142.0
DYD3_k127_4382734_0 Aminotransferase class I and II - - - 2.795e-213 668.0
DYD3_k127_4382734_1 PFAM 2Fe-2S iron-sulfur cluster binding domain K02613 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006909 350.0
DYD3_k127_4382734_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001308 329.0
DYD3_k127_4382734_3 Putative member of DMT superfamily (DUF486) K09922 - - 0.000000000000000000000000000000000000000000000000000009774 191.0
DYD3_k127_4382734_4 - - - - 0.000000000000000000000000000000000000000000000003348 189.0
DYD3_k127_4382734_5 - - - - 0.0000004037 55.0
DYD3_k127_4390410_0 - - - - 1.646e-219 686.0
DYD3_k127_4390410_1 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 467.0
DYD3_k127_4390410_10 - - - - 0.000000000000000000000000000000001776 137.0
DYD3_k127_4390410_11 - - - - 0.0005325 51.0
DYD3_k127_4390410_2 Belongs to the ParB family K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006777 377.0
DYD3_k127_4390410_3 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine K03648 GO:0003674,GO:0003824,GO:0004844,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0097510,GO:0140097,GO:1901360 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002188 342.0
DYD3_k127_4390410_4 PFAM CobQ CobB MinD ParA nucleotide binding domain K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003631 299.0
DYD3_k127_4390410_5 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 298.0
DYD3_k127_4390410_6 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000000002003 222.0
DYD3_k127_4390410_7 protein affecting Mg2 Co2 transport K06195 - - 0.000000000000000000000000000000000000000000000000000000000004848 209.0
DYD3_k127_4390410_8 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000005569 199.0
DYD3_k127_4390410_9 MoeZ MoeB domain K21029,K21147 - 2.7.7.80,2.8.1.11 0.0000000000000000000000000000000000000001225 152.0
DYD3_k127_4421660_0 PFAM DeoC LacD family aldolase K11645 - 4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 583.0
DYD3_k127_4421660_1 TonB-dependent Receptor Plug - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001638 585.0
DYD3_k127_4421660_2 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001766 490.0
DYD3_k127_4421660_3 Starch-binding associating with outer membrane - - - 0.00000000000000000000000000000000000000000000000000000008012 199.0
DYD3_k127_4421660_4 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000000003042 179.0
DYD3_k127_4433807_0 Caspase domain - - - 0.0 1223.0
DYD3_k127_4433807_1 enoyl-CoA hydratase isomerase family K15866 - 5.3.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009826 383.0
DYD3_k127_4433807_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000001156 203.0
DYD3_k127_4433807_3 Domain of unknown function (DUF4260) - - - 0.0000000000000000000000000000000000000699 145.0
DYD3_k127_4453382_0 PFAM peptidase S45 penicillin amidase K01434 - 3.5.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001713 621.0
DYD3_k127_4453382_1 Belongs to the KdsA family K01627 - 2.5.1.55 0.0000000000000000000000000000000000000000000000000000000000000000001973 232.0
DYD3_k127_4453382_2 TIGRFAM 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270,K21055 - 3.1.3.103,3.1.3.45 0.00000000000000000000000000000000000000000000000003875 183.0
DYD3_k127_4453382_3 Nucleotidyl transferase AbiEii toxin, Type IV TA system - - - 0.000000000000000000000000000000000000000000002934 172.0
DYD3_k127_4462710_0 - - - - 0.00000000000000000000000000000000000001432 152.0
DYD3_k127_4462710_1 secreted Zn-dependent protease - - - 0.00000000000001025 81.0
DYD3_k127_4462710_2 - - - - 0.000000000001583 68.0
DYD3_k127_4480487_0 Glucosamine-6-phosphate isomerase K02564 - 3.5.99.6 4.408e-310 960.0
DYD3_k127_4480487_1 MacB-like periplasmic core domain K02004 - - 8.926e-235 750.0
DYD3_k127_4480487_10 - - - - 0.0000000000001542 73.0
DYD3_k127_4480487_11 Tellurite resistance protein TerB - - - 0.0000000002168 68.0
DYD3_k127_4480487_12 - - - - 0.00000519 49.0
DYD3_k127_4480487_2 PFAM GSCFA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005324 347.0
DYD3_k127_4480487_3 PFAM SMP-30 Gluconolaconase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009005 273.0
DYD3_k127_4480487_4 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000000000000000000000000000004975 218.0
DYD3_k127_4480487_5 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00000000000000000000000000000000000000000003844 169.0
DYD3_k127_4480487_6 - K16923 - - 0.0000000000000000000000000000000000005021 157.0
DYD3_k127_4480487_7 Nucleotidyl transferase AbiEii toxin, Type IV TA system - - - 0.000000000000000000000000000000000001064 147.0
DYD3_k127_4480487_8 ketosteroid isomerase - - - 0.00000000000000000000003734 105.0
DYD3_k127_4480487_9 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616,K08314 - 2.2.1.2 0.0000000000000000000001471 97.0
DYD3_k127_4497478_0 Sulfatase-modifying factor enzyme 1 - - - 0.0 1012.0
DYD3_k127_4497478_1 two component, sigma54 specific, transcriptional regulator, Fis family - - - 1.349e-222 697.0
DYD3_k127_4497478_2 Protein of unknown function (DUF2911) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000453 431.0
DYD3_k127_4497478_3 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001309 384.0
DYD3_k127_4497478_4 Diacylglycerol kinase - - - 0.000000000000000000000000000000000000000000000000000000000000753 220.0
DYD3_k127_4497478_5 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000000000000000002026 106.0
DYD3_k127_4497478_6 Glutamine synthetase, beta-Grasp domain K01915 - 6.3.1.2 0.0000000107 56.0
DYD3_k127_4503182_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 2.92e-293 906.0
DYD3_k127_4503182_1 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.000000000000000000000000000000000001519 149.0
DYD3_k127_4503182_2 Bacterial transcriptional repressor - - - 0.0000000000000000000000001296 111.0
DYD3_k127_4507580_0 PFAM Bacterial alpha-L-rhamnosidase K05989 - 3.2.1.40 0.0 1244.0
DYD3_k127_4507580_1 OmpA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003605 552.0
DYD3_k127_4507580_2 Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 367.0
DYD3_k127_4507580_3 Pyrimidine operon attenuation protein uracil phosphoribosyltransferase K02825 - 2.4.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000005179 261.0
DYD3_k127_4507580_4 Belongs to the ATCase OTCase family K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000001144 255.0
DYD3_k127_4507580_5 regulator of chromosome condensation, RCC1 - - - 0.00000000000000000000000006536 119.0
DYD3_k127_4533768_0 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 4.4e-219 696.0
DYD3_k127_4533768_1 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003189 594.0
DYD3_k127_4533768_2 ammonium transporter K03320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 495.0
DYD3_k127_4533768_3 CotH kinase protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001341 385.0
DYD3_k127_4533768_4 ATPase kinase involved in NAD metabolism - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004058 373.0
DYD3_k127_4533768_5 TIGRFAM Nicotinamide mononucleotide transporter PnuC K03811 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009941 294.0
DYD3_k127_4533768_6 Nitrogen regulatory protein P-II K04751 - - 0.00000000000000000000000000000000000001715 146.0
DYD3_k127_4540445_0 PFAM Glutamine amidotransferase, class-II K00764 - 2.4.2.14 0.0 1006.0
DYD3_k127_4540445_1 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 591.0
DYD3_k127_4540445_10 4Fe-4S ferredoxin iron-sulfur binding domain protein K00338 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000008991 235.0
DYD3_k127_4540445_11 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.000000000000000009903 86.0
DYD3_k127_4540445_12 Diacylglycerol kinase K00887,K00901 - 2.7.1.107,2.7.1.66 0.00000000000000001425 86.0
DYD3_k127_4540445_13 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.00000161 56.0
DYD3_k127_4540445_2 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000198 401.0
DYD3_k127_4540445_3 TIGRFAM hydrolase, TatD family K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001949 375.0
DYD3_k127_4540445_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001964 331.0
DYD3_k127_4540445_5 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006921 314.0
DYD3_k127_4540445_6 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002446 312.0
DYD3_k127_4540445_7 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002605 304.0
DYD3_k127_4540445_8 NADH ubiquinone oxidoreductase subunit 5 (Chain L) multisubunit Na H antiporter, MnhA subunit K00341 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003474 314.0
DYD3_k127_4540445_9 Belongs to the glycerate kinase type-1 family K00865 - 2.7.1.165 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001655 287.0
DYD3_k127_4542205_0 CarboxypepD_reg-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000813 480.0
DYD3_k127_4542205_1 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001138 279.0
DYD3_k127_4542205_2 Homogentisate 12-dioxygenase K00451 - 1.13.11.5 0.000000000000000000000000000000000002806 138.0
DYD3_k127_4562490_0 Two component regulator propeller - - - 0.0 1244.0
DYD3_k127_4562490_1 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006172 514.0
DYD3_k127_4562490_2 Glycosyl-hydrolase 97 C-terminal, oligomerisation - - - 0.0000000000000000000000003325 110.0
DYD3_k127_4576228_0 PFAM ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008388 524.0
DYD3_k127_4576228_1 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005163 513.0
DYD3_k127_4576228_2 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001627 473.0
DYD3_k127_4576228_3 Methionine biosynthesis protein MetW - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000491 311.0
DYD3_k127_4576228_4 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218,K03437 - 2.1.1.185 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004383 306.0
DYD3_k127_4576228_5 - - - - 0.000000000000000000000000000000000000000000000006976 186.0
DYD3_k127_4576228_6 PFAM NAD dependent epimerase dehydratase family K01710,K08678 - 4.1.1.35,4.2.1.46 0.00000000000000000000000000000000000001199 145.0
DYD3_k127_4589979_0 PFAM TonB-dependent Receptor Plug - - - 6.472e-204 654.0
DYD3_k127_4589979_1 PFAM Periplasmic binding protein LacI transcriptional regulator K02529 - - 0.00000000000000000000000000000000000000000000000000000000000185 214.0
DYD3_k127_4589979_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000003046 153.0
DYD3_k127_4602426_0 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000183 398.0
DYD3_k127_4602426_1 PFAM bifunctional deaminase-reductase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005306 294.0
DYD3_k127_4602426_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K06996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002563 250.0
DYD3_k127_4602426_3 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0000000000000000002418 88.0
DYD3_k127_4602426_4 TIGRFAM RHS repeat-associated core domain - - - 0.000000007603 59.0
DYD3_k127_4606665_0 PFAM TonB-dependent Receptor Plug - - - 0.0 1065.0
DYD3_k127_4606665_1 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 8.618e-309 966.0
DYD3_k127_4606665_10 Domain of unknown function (DUF4249) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007141 265.0
DYD3_k127_4606665_11 DinB superfamily - - - 0.000000000000000000000000000000000001436 143.0
DYD3_k127_4606665_12 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.00000000000000000000000000004068 119.0
DYD3_k127_4606665_13 - - - - 0.0000000000000000000000008835 106.0
DYD3_k127_4606665_14 - - - - 0.000000000000000000000007285 111.0
DYD3_k127_4606665_15 Uncharacterized protein conserved in bacteria (DUF2219) - - - 0.0000000000000000000002395 108.0
DYD3_k127_4606665_16 - - - - 0.0000000000000000000434 100.0
DYD3_k127_4606665_17 glutamate synthase K00265 - 1.4.1.13,1.4.1.14 0.00000000000001853 73.0
DYD3_k127_4606665_18 TonB-dependent Receptor Plug Domain - - - 0.00000003353 60.0
DYD3_k127_4606665_2 Endoribonuclease that initiates mRNA decay K18682 - - 2.689e-257 801.0
DYD3_k127_4606665_3 Large extracellular alpha-helical protein - - - 4.171e-231 739.0
DYD3_k127_4606665_4 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006896 589.0
DYD3_k127_4606665_5 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006479 508.0
DYD3_k127_4606665_6 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 376.0
DYD3_k127_4606665_7 PFAM Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008758 312.0
DYD3_k127_4606665_8 GDSL-like Lipase/Acylhydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 309.0
DYD3_k127_4606665_9 SMART Signal transduction response regulator, receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006416 280.0
DYD3_k127_4677831_0 Peptidase m28 - - - 3.452e-244 764.0
DYD3_k127_4677831_1 FtsX-like permease family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009583 460.0
DYD3_k127_4677831_2 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000513 384.0
DYD3_k127_4677831_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001122 276.0
DYD3_k127_4677831_4 Transposase IS200 like - - - 0.0000000000000000000000000000000005159 139.0
DYD3_k127_4677831_5 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000002703 127.0
DYD3_k127_4677831_6 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine - - - 0.00000001153 59.0
DYD3_k127_4687337_0 Oligogalacturonate lyase K01730 - 4.2.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007301 496.0
DYD3_k127_4687337_1 ROK family K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005559 434.0
DYD3_k127_4687337_2 Helix-turn-helix XRE-family like proteins - - - 0.00000000000000000000000000000000000000000000000000000000000003282 222.0
DYD3_k127_4687337_3 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K00850 - 2.7.1.11 0.00000000000000000000000000000000000000000000000000001244 193.0
DYD3_k127_4687337_4 Transcriptional regulator PadR-like family - - - 0.00000000000000000000005162 101.0
DYD3_k127_4687337_5 MacB-like periplasmic core domain K02004 - - 0.00000000001104 68.0
DYD3_k127_4689040_0 PFAM Alanine dehydrogenase PNT, C-terminal domain K00259 - 1.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003608 606.0
DYD3_k127_4689040_1 Glycosyl Hydrolase Family 88 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 378.0
DYD3_k127_4689040_2 Alpha-amylase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004604 385.0
DYD3_k127_4689040_3 Protein of unknown function (DUF2911) - - - 0.000000000000000000000000000000000000000000000000000000000000000000004965 238.0
DYD3_k127_4689040_4 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.000000000000000000000000000000000000000000000566 167.0
DYD3_k127_4689040_5 PFAM Uncharacterised P-loop hydrolase UPF0079 K06925 - - 0.000000000000000000000000000000000000000003865 159.0
DYD3_k127_4694086_0 Aerotolerance regulator N-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007357 501.0
DYD3_k127_4694086_1 TIGRFAM dihydroorotase, multifunctional complex type K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001997 437.0
DYD3_k127_4694086_2 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004058 389.0
DYD3_k127_4694086_3 Biopolymer transport protein ExbD/TolR - - - 0.000000000000000000000000000000000000000000000000166 182.0
DYD3_k127_4694086_4 Protein of unknown function (DUF4199) - - - 0.000000000000001156 84.0
DYD3_k127_4694086_5 PFAM Proline dehydrogenase K00318 - - 0.000008581 51.0
DYD3_k127_4721020_0 PFAM PfkB K00874 - 2.7.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003962 544.0
DYD3_k127_4721020_1 PFAM Alanine racemase, N-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002384 414.0
DYD3_k127_4721020_2 PFAM Endoribonuclease L-PSP - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000219 249.0
DYD3_k127_4721020_3 PFAM KDPG and KHG aldolase K01625 - 4.1.2.14,4.1.3.42 0.00000000000000000000000000000000000000000000000000000000000000000001279 239.0
DYD3_k127_4721020_4 COGs COG2610 H gluconate symporter and related permease K06155 - - 0.0000000000000000000000000000000000000000000001078 169.0
DYD3_k127_4725763_0 - - - - 0.0000000000000000000000000000000000000000000000000007917 186.0
DYD3_k127_4725763_1 Endoribonuclease that initiates mRNA decay K18682 - - 0.000000000000000000000000000000000008137 142.0
DYD3_k127_4725763_2 SPTR CHU large protein - - - 0.000000000000006045 76.0
DYD3_k127_4725763_3 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.0000000009533 63.0
DYD3_k127_4725763_4 - - - - 0.000006736 51.0
DYD3_k127_4725763_5 Psort location Cytoplasmic, score 8.96 - - - 0.0001792 48.0
DYD3_k127_4755849_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001875 553.0
DYD3_k127_4755849_1 PFAM AIG2 family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000008381 224.0
DYD3_k127_4755849_2 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase - - - 0.00000000000000001581 83.0
DYD3_k127_4755849_3 Tfp pilus assembly protein FimV - - - 0.0000000000000002449 86.0
DYD3_k127_4758798_0 Phosphate acetyl butaryl transferase K00027,K00029 - 1.1.1.38,1.1.1.40 2.275e-237 743.0
DYD3_k127_4758798_1 Transposase IS200 like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005705 240.0
DYD3_k127_4773048_0 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K01739,K01760 - 2.5.1.48,4.4.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 479.0
DYD3_k127_4773048_1 tRNA synthetase class II core domain (G, H, P, S and T) K01875 - 6.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004971 406.0
DYD3_k127_4773048_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001247 270.0
DYD3_k127_4773048_3 PFAM methyladenine glycosylase K01246 - 3.2.2.20 0.00000000000000000000000000000000000000000000000000000000000000000000001798 247.0
DYD3_k127_4773048_4 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.000000000000000000000000000000000000000000000000000000000000000000003611 239.0
DYD3_k127_4773048_5 translation initiation inhibitor, yjgF family - - - 0.00000000000000000000000000000000000000000000000000000000001117 211.0
DYD3_k127_4773048_6 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0000000000000000000000000000000000007956 143.0
DYD3_k127_4779516_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007249 337.0
DYD3_k127_4839301_0 belongs to the aldehyde dehydrogenase family - - - 2.838e-290 898.0
DYD3_k127_4839301_1 Protein of unknown function (DUF4197) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001597 327.0
DYD3_k127_4839301_2 phosphinothricin acetyltransferase K03823 - 2.3.1.183 0.0000000000000000000000000000000000000000000000000000000000134 210.0
DYD3_k127_4839301_3 Transposase domain (DUF772) - - - 0.000000000000000000000000000000000000000000000000000000001158 205.0
DYD3_k127_4839301_4 DoxX K15977 - - 0.00000000000000000000000000000000000000002175 156.0
DYD3_k127_4839301_5 PDZ DHR GLGF domain protein - - - 0.0000000000000000000000000000000000000002111 162.0
DYD3_k127_4839301_6 - - - - 0.0000000000000000000000001121 119.0
DYD3_k127_4839301_7 - - - - 0.0000000000001643 72.0
DYD3_k127_4839301_8 Phage derived protein Gp49-like (DUF891) - - - 0.000000008282 57.0
DYD3_k127_4839301_9 Phage derived protein Gp49-like (DUF891) - - - 0.0000001862 54.0
DYD3_k127_4844395_0 Pfam:SusD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003703 550.0
DYD3_k127_4844395_1 TonB-dependent Receptor Plug Domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 435.0
DYD3_k127_4844395_2 PFAM TonB-dependent Receptor Plug - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000225 271.0
DYD3_k127_4847153_0 ATPases associated with a variety of cellular activities K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003065 443.0
DYD3_k127_4847153_1 Beta-lactamase enzyme family K17836 - 3.5.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001474 335.0
DYD3_k127_4847153_2 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 304.0
DYD3_k127_4847153_3 PFAM Pseudouridine synthase, RsuA and RluB C D E F K06177,K06180 - 5.4.99.23,5.4.99.28,5.4.99.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008234 281.0
DYD3_k127_4847153_4 ABC-type uncharacterized transport system - - - 0.00000000000000000000000000000000000000000000008413 175.0
DYD3_k127_4847153_5 Putative restriction endonuclease - - - 0.00000000000000000000000000000000000000009981 157.0
DYD3_k127_4847153_6 ig-like, plexins, transcription factors - - - 0.000000000000000000000000009718 124.0
DYD3_k127_4847153_7 - - - - 0.00000000000000000000265 97.0
DYD3_k127_4847153_8 Kelch repeat type 1 - - - 0.0000000000000005471 91.0
DYD3_k127_4847896_0 PQQ-like domain - - - 1.216e-200 642.0
DYD3_k127_4847896_1 Two component regulator propeller - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 449.0
DYD3_k127_4847896_2 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009423 261.0
DYD3_k127_4847896_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000002378 237.0
DYD3_k127_4847896_4 Pfam Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000001696 195.0
DYD3_k127_4847896_5 PFAM Glyoxalase bleomycin resistance protein dioxygenase K06996 - - 0.0000000000000000000000000002164 117.0
DYD3_k127_4847896_6 - - - - 0.0000000000000000000000002418 111.0
DYD3_k127_4847896_7 Outer membrane protein beta-barrel domain - - - 0.00000000004283 72.0
DYD3_k127_4847896_8 Domain of unknown function (DU1801) - - - 0.000001529 50.0
DYD3_k127_4847968_0 PFAM M42 glutamyl aminopeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001721 443.0
DYD3_k127_4847968_1 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009071 397.0
DYD3_k127_4847968_2 Domain of unknown function (DUF4154) - - - 0.00000000000000000000000000000000000000000000000000002994 195.0
DYD3_k127_4847968_3 Domain of unknown function (DUF4154) - - - 0.00000000000000000000000000000000000000000009494 166.0
DYD3_k127_4897134_0 Tricorn protease homolog K08676 - - 1.744e-282 884.0
DYD3_k127_4900190_0 DNA segregation ATPase FtsK SpoIIIE K03466 - - 2.27e-322 1004.0
DYD3_k127_4900190_1 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 439.0
DYD3_k127_4900190_2 Protein of unknown function (DUF2851) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000305 402.0
DYD3_k127_4900190_3 Orotidine 5''-phosphate decarboxylase K01591 GO:0003674,GO:0003824,GO:0004590,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002047 389.0
DYD3_k127_4900190_4 PFAM Outer membrane lipoprotein carrier protein LolA K03634 - - 0.0000000000000000000000000000000000000000000000000000000000000000003966 234.0
DYD3_k127_4900190_5 - - - - 0.0000000000000000000000000000000000000003465 161.0
DYD3_k127_4900190_6 Domain of unknown function (DUF4136) - - - 0.00000000401 62.0
DYD3_k127_49410_0 Belongs to the type II topoisomerase GyrA ParC subunit family K02621 - - 1.985e-238 754.0
DYD3_k127_49410_1 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004413 281.0
DYD3_k127_49410_2 PFAM Bacterial regulatory protein, arsR family - - - 0.00000000000000000000000000000000000000000000000000007876 187.0
DYD3_k127_49410_3 PFAM Activator of Hsp90 ATPase - - - 0.00000000000000000000000000000000000000000000000002345 179.0
DYD3_k127_49410_4 methyltransferase - - - 0.00000000000002294 75.0
DYD3_k127_4945741_0 PFAM WD domain, G-beta repeat - - - 0.0000000000000000000000000000000000000000000000000006396 207.0
DYD3_k127_4945741_1 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000000000000000000000000002391 164.0
DYD3_k127_4954696_0 FtsX-like permease family - - - 1.788e-267 845.0
DYD3_k127_4954696_1 permease - - - 9.063e-256 811.0
DYD3_k127_4954696_2 FtsX-like permease family - - - 4.374e-252 803.0
DYD3_k127_4954696_3 FtsX-like permease family - - - 7.697e-248 792.0
DYD3_k127_4954696_4 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 599.0
DYD3_k127_4954696_5 PFAM transcriptional regulator PadR family protein - - - 0.000000000000000000000000000000000000000000000003421 175.0
DYD3_k127_4954696_6 MacB-like periplasmic core domain K02004 - - 0.00000000000000009465 81.0
DYD3_k127_4954696_7 - - - - 0.000009069 47.0
DYD3_k127_4957159_0 COG COG1073 Hydrolases of the alpha beta superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005973 597.0
DYD3_k127_4957159_1 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 593.0
DYD3_k127_4957159_10 PFAM 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567,K07443 - 2.1.1.63 0.0000000000000000000000000000000000000000004084 160.0
DYD3_k127_4957159_11 PFAM ATP-dependent Clp protease adaptor protein ClpS K06891 - - 0.00000000000000000000000000000006909 126.0
DYD3_k127_4957159_2 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004034 595.0
DYD3_k127_4957159_3 metallopeptidase activity K01181 - 3.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003767 491.0
DYD3_k127_4957159_4 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 408.0
DYD3_k127_4957159_5 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001458 387.0
DYD3_k127_4957159_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 370.0
DYD3_k127_4957159_7 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 296.0
DYD3_k127_4957159_8 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002366 279.0
DYD3_k127_4957159_9 LytTr DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002904 266.0
DYD3_k127_4967921_0 Prolyl oligopeptidase family - - - 1.787e-290 919.0
DYD3_k127_4967921_1 TonB-dependent receptor - - - 1.331e-268 846.0
DYD3_k127_4967921_10 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004445 439.0
DYD3_k127_4967921_11 Stage II sporulation protein M - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000375 338.0
DYD3_k127_4967921_13 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004854 269.0
DYD3_k127_4967921_14 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005032 258.0
DYD3_k127_4967921_15 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000001856 170.0
DYD3_k127_4967921_16 DinB family - - - 0.0000000000000000000000000000000000000000006526 163.0
DYD3_k127_4967921_17 - - - - 0.0000000000000000000000000000000000000000006552 166.0
DYD3_k127_4967921_18 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin - - - 0.000000000000000000000000000000001244 142.0
DYD3_k127_4967921_19 Domain of unknown function (DUF4129) - - - 0.000000000000000000000000000008732 129.0
DYD3_k127_4967921_2 Belongs to the peptidase S8 family K08651 - 3.4.21.66 1.874e-240 784.0
DYD3_k127_4967921_20 response regulator receiver - - - 0.0000000000000000000000003612 109.0
DYD3_k127_4967921_21 Membrane - - - 0.00000000007268 62.0
DYD3_k127_4967921_3 Oxidoreductase - - - 2.29e-236 743.0
DYD3_k127_4967921_4 Oxidoreductase domain protein - - - 1.578e-232 722.0
DYD3_k127_4967921_5 metal-dependent hydrolase with the TIM-barrel fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009666 610.0
DYD3_k127_4967921_6 Nucleoside H+ symporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008818 591.0
DYD3_k127_4967921_7 acetyl-CoA hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002576 559.0
DYD3_k127_4967921_8 Protein of unknown function DUF58 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002087 525.0
DYD3_k127_4967921_9 MCM2/3/5 family K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002059 432.0
DYD3_k127_4997571_0 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007733 512.0
DYD3_k127_4997571_1 PFAM Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 451.0
DYD3_k127_4997571_2 galactokinase activity K00849 - 2.7.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008217 379.0
DYD3_k127_4997571_3 TIGRFAM galactose-1-phosphate uridylyltransferase K00965 - 2.7.7.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006152 334.0
DYD3_k127_4997571_4 PFAM YhhN-like protein - - - 0.000000000000000000000000000000000000000000000008872 179.0
DYD3_k127_501197_0 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 1.091e-194 612.0
DYD3_k127_501197_1 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000892 544.0
DYD3_k127_501197_2 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001723 382.0
DYD3_k127_501197_3 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000002717 270.0
DYD3_k127_501197_4 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000001407 242.0
DYD3_k127_501197_5 CobW/HypB/UreG, nucleotide-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000003703 233.0
DYD3_k127_5036468_0 Sortilin, neurotensin receptor 3, - - - 0.0 1543.0
DYD3_k127_5036468_1 PFAM Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 298.0
DYD3_k127_5036713_0 CHAT domain - - - 5.53e-209 679.0
DYD3_k127_5036713_1 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007054 556.0
DYD3_k127_5036713_2 Belongs to the UPF0176 family K07146 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002217 488.0
DYD3_k127_5036713_3 PFAM Peptidase family M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 479.0
DYD3_k127_5036713_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004978 312.0
DYD3_k127_5036713_5 beta-galactosidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 306.0
DYD3_k127_5036713_6 Probable molybdopterin binding domain K03831 - 2.7.7.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000158 288.0
DYD3_k127_5036713_7 beta-galactosidase activity K05970 - 3.1.1.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003126 294.0
DYD3_k127_5046101_0 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005023 519.0
DYD3_k127_5046101_1 VIT family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000203 294.0
DYD3_k127_5046101_2 Belongs to the ompA family - - - 0.00000000000000000000000000000000000000000000000000000002539 212.0
DYD3_k127_5046101_3 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain K07117 - - 0.0000000000000000000000000000000005837 135.0
DYD3_k127_5046101_5 CarboxypepD_reg-like domain - - - 0.0001575 53.0
DYD3_k127_5077888_0 Transcription elongation factor - - - 0.000000000000000000000000000000000000000000005966 168.0
DYD3_k127_5077888_1 DinB family - - - 0.00000000000000000000000000001359 123.0
DYD3_k127_5077888_2 - - - - 0.0000000000000000000000000008277 117.0
DYD3_k127_5077888_3 two helix domain - - - 0.0000000000000000007672 87.0
DYD3_k127_5077888_4 - - - - 0.000000000928 64.0
DYD3_k127_5077888_5 Protein of unknown function (DUF3592) - - - 0.00000005086 61.0
DYD3_k127_5107050_0 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000132 572.0
DYD3_k127_5107050_1 phosphate transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000284 571.0
DYD3_k127_5107050_2 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000342 289.0
DYD3_k127_5107050_3 Domain of unknown function (DUF4956) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001638 262.0
DYD3_k127_5107050_4 PFAM secretion protein HlyD family protein K01993,K02022,K20345 - - 0.00000001074 62.0
DYD3_k127_5138567_0 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004445 583.0
DYD3_k127_5138567_1 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 578.0
DYD3_k127_5138567_2 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001433 568.0
DYD3_k127_5138567_3 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001914 441.0
DYD3_k127_5138567_4 Molybdopterin converting factor, large subunit K03635 - 2.8.1.12 0.000000000000000000000000000000000000000005779 158.0
DYD3_k127_5138567_5 Domain of unknown function (DUF4440) - - - 0.0000000000000000000000000000000000002077 145.0
DYD3_k127_5138567_6 YceI-like domain - - - 0.00000000000000000000000739 103.0
DYD3_k127_5138567_7 Sigma-70 region 2 K03088 - - 0.00000000000000000001176 94.0
DYD3_k127_5138567_8 membrane protein (DUF2078) K08982 - - 0.000000005297 62.0
DYD3_k127_5142595_0 TrkA-C domain K11105 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002103 595.0
DYD3_k127_5142595_1 Acts as a magnesium transporter K06213 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005301 510.0
DYD3_k127_5142595_2 Belongs to the PdxA family K00097 - 1.1.1.262 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000269 453.0
DYD3_k127_5142595_3 Pentapeptide repeats (9 copies) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006663 407.0
DYD3_k127_5142595_4 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000155 307.0
DYD3_k127_5142595_5 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000393 243.0
DYD3_k127_5142595_6 HIT family hydrolase K02503 - - 0.000000000000000000000000000000000000000000000000003951 183.0
DYD3_k127_5142595_7 Uncharacterized ACR, COG1399 - - - 0.000000000000000000107 92.0
DYD3_k127_5142595_8 - - - - 0.00000000009927 67.0
DYD3_k127_5147923_0 Putative amidoligase enzyme (DUF2126) - - - 0.0 1541.0
DYD3_k127_5147923_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 3.09e-238 747.0
DYD3_k127_5147923_2 A predicted alpha-helical domain with a conserved ER motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008241 417.0
DYD3_k127_5147923_4 Protein of unknown function (DUF1549) K20276 - - 0.0000000003214 61.0
DYD3_k127_5155664_0 competence protein COMEC - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 356.0
DYD3_k127_5155664_2 Putative amidase domain - - - 0.0000000000000000000000000000000000004825 151.0
DYD3_k127_5155664_3 NlpC/P60 family - - - 0.0000000000000002887 89.0
DYD3_k127_5162487_0 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003316 346.0
DYD3_k127_5162487_1 Gliding motility protein, GldB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006632 340.0
DYD3_k127_5162487_2 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000000000000000000000000000000000000000005802 233.0
DYD3_k127_5162487_3 Thioredoxin - - - 0.0000000000000000000000000000000000000000006356 161.0
DYD3_k127_5162487_4 PFAM Yqey-like protein K09117 - - 0.0000000000000000000000000008781 115.0
DYD3_k127_5167676_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 6.658e-290 901.0
DYD3_k127_5167676_1 Belongs to the glycosyl hydrolase 57 family - - - 5.79e-273 856.0
DYD3_k127_5167676_2 Rieske (2fe-2S) K00499 - 1.14.15.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 413.0
DYD3_k127_5167676_3 - - - - 0.00000000000000000000000000000000000005097 146.0
DYD3_k127_5167676_4 Outer membrane protein beta-barrel domain - - - 0.000000000000000000000001941 106.0
DYD3_k127_5183621_0 Aldehyde dehydrogenase family K00131 - 1.2.1.9 1.876e-259 809.0
DYD3_k127_5183621_1 Dihydrolipoyl dehydrogenase K00382 - 1.8.1.4 1.888e-230 721.0
DYD3_k127_5183621_2 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 GO:0003674,GO:0003824,GO:0004139,GO:0005975,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009262,GO:0009264,GO:0009987,GO:0016052,GO:0016829,GO:0016830,GO:0016832,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 4.1.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004569 267.0
DYD3_k127_5183621_3 Staphylococcal nuclease homologues K01174 - 3.1.31.1 0.0000000000000000000000000000006377 127.0
DYD3_k127_5183621_4 Acylphosphatase K01512 - 3.6.1.7 0.000000000000000000007077 95.0
DYD3_k127_5186038_0 Tetratricopeptide repeat - - - 7.985e-256 822.0
DYD3_k127_5186038_1 Psort location OuterMembrane, score - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001951 335.0
DYD3_k127_5186038_2 peptidyl-tyrosine sulfation - - - 0.0000000000001957 82.0
DYD3_k127_52144_0 DNA-directed DNA polymerase K02337 - 2.7.7.7 0.0 1365.0
DYD3_k127_52144_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001939 353.0
DYD3_k127_52144_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000013 186.0
DYD3_k127_52144_3 chlorophyll binding - - - 0.0000007037 50.0
DYD3_k127_5229469_0 Protein of unknown function (DUF1549) - - - 3.849e-312 980.0
DYD3_k127_5229469_1 COG1914 Mn2 and Fe2 transporters of the NRAMP family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 476.0
DYD3_k127_5229469_2 Belongs to the UPF0271 (lamB) family K07160 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001507 281.0
DYD3_k127_5229469_3 PFAM Allophanate hydrolase subunit 2 K06350 - - 0.00000000000000000000000000000000000000000000000000000000000000005966 234.0
DYD3_k127_5229469_4 phosphohydrolase K21196 - 1.13.11.78 0.00000000000000000000000000000000000000000000000000000000000005372 220.0
DYD3_k127_5229469_5 Allophanate hydrolase subunit 1 K06351 - - 0.000000000000000000000000000000000000000000000000000000002564 207.0
DYD3_k127_5229469_6 Protein of unknown function (DUF1501) - - - 0.000000000000000000000000000000000000002346 149.0
DYD3_k127_5229469_7 HAD-hyrolase-like - - - 0.00000000000000000000000000000000007023 139.0
DYD3_k127_523645_0 Fatty acid desaturase K00508 - 1.14.19.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001457 489.0
DYD3_k127_523645_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001178 397.0
DYD3_k127_523645_2 chaperone DnaJ K03686,K05516 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001887 391.0
DYD3_k127_523645_3 - - - - 0.00000000000000000000000153 108.0
DYD3_k127_523645_4 MerR HTH family regulatory protein - - - 0.0000000000000000000002755 99.0
DYD3_k127_5238328_0 PFAM Copper binding proteins, plastocyanin azurin family - - - 0.0 1517.0
DYD3_k127_5238328_1 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001601 267.0
DYD3_k127_5238328_2 Xylose isomerase-like TIM barrel K18910 - 5.1.3.30,5.1.3.31 0.00000000000000000000000000000000000002442 145.0
DYD3_k127_5240516_0 Protein of unknown function (DUF2723) - - - 0.0 1096.0
DYD3_k127_5240516_1 Belongs to the glycosyl hydrolase 28 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003469 406.0
DYD3_k127_5251835_0 penicillin-binding protein 1C K05367 - 2.4.1.129 1.945e-262 831.0
DYD3_k127_5251835_1 Alpha-L-fucosidase K01206 - 3.2.1.51 1.579e-219 691.0
DYD3_k127_5251835_10 Belongs to the HesB IscA family K13628 - - 0.00000000000000000000000000000000000000000000000000006421 188.0
DYD3_k127_5251835_11 chlorophyll binding - - - 0.00000000000000000000000000000000000000000001242 172.0
DYD3_k127_5251835_12 PFAM RibD C-terminal domain K00287 - 1.5.1.3 0.00000000000000000000000000000000000000000003001 164.0
DYD3_k127_5251835_13 transcriptional regulator (AraC family) - - - 0.000000000000000000000000000000003925 142.0
DYD3_k127_5251835_14 Domain of unknown function (DUF4198) - - - 0.000000000000000000000000008755 119.0
DYD3_k127_5251835_15 Ion channel - - - 0.00000000000000000000007435 108.0
DYD3_k127_5251835_16 chlorophyll binding - - - 0.00000005386 58.0
DYD3_k127_5251835_2 Belongs to the glycosyl hydrolase 28 family - - - 5.464e-219 687.0
DYD3_k127_5251835_3 Belongs to the peptidase M24B family K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000206 571.0
DYD3_k127_5251835_4 MoeZ MoeB domain K21029,K21147 - 2.7.7.80,2.8.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002844 437.0
DYD3_k127_5251835_5 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020,K00042 - 1.1.1.31,1.1.1.60 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002279 398.0
DYD3_k127_5251835_6 pfam nudix - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001884 251.0
DYD3_k127_5251835_7 Endoribonuclease L-PSP K15067 - 3.5.99.5 0.000000000000000000000000000000000000000000000000000000000000001893 219.0
DYD3_k127_5251835_8 Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.00000000000000000000000000000000000000000000000000000003858 198.0
DYD3_k127_5251835_9 - - - - 0.00000000000000000000000000000000000000000000000000000004885 199.0
DYD3_k127_5270195_0 Metal-dependent hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005626 250.0
DYD3_k127_5270195_1 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.000000000000000000000000000000000000000000000000000000000000000001115 229.0
DYD3_k127_5270195_3 - - - - 0.000000000000000000000000000000006973 130.0
DYD3_k127_5270195_4 Protein of unknown function (DUF433) - - - 0.00000000000000002815 83.0
DYD3_k127_5272129_0 PFAM Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001357 564.0
DYD3_k127_5272129_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 557.0
DYD3_k127_5272129_2 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002282 510.0
DYD3_k127_5272129_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002734 322.0
DYD3_k127_5272129_4 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000002525 263.0
DYD3_k127_5272129_5 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.0000000000000000000000000000000000000000000000000000001444 200.0
DYD3_k127_5272129_6 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - 0.000000000000000000000000000000000000000000000003032 179.0
DYD3_k127_5273358_0 Glycosyl transferase 4-like K13004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007271 476.0
DYD3_k127_5273358_1 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002577 441.0
DYD3_k127_5273358_2 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.0000000000000000000000000000000000006088 142.0
DYD3_k127_5273358_3 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.00003149 46.0
DYD3_k127_5289938_0 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 7.234e-233 726.0
DYD3_k127_5289938_1 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009663 532.0
DYD3_k127_5289938_2 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004307 465.0
DYD3_k127_5289938_3 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001537 416.0
DYD3_k127_5289938_4 Cell division protein K03589 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002668 263.0
DYD3_k127_5289938_5 23S rRNA-intervening sequence protein - - - 0.00000000000000000000000000000000000001807 147.0
DYD3_k127_5290402_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 1.989e-263 819.0
DYD3_k127_5290402_1 - - - - 0.000000000000000000000000000000002544 146.0
DYD3_k127_5290402_2 long-chain fatty acid transport protein - - - 0.0000000000000000002286 94.0
DYD3_k127_5299509_0 Periplasmic copper-binding protein (NosD) K07218 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 510.0
DYD3_k127_5299509_1 ABC-2 family transporter protein K19341 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003116 299.0
DYD3_k127_5299509_2 ATPases associated with a variety of cellular activities K19340 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005015 270.0
DYD3_k127_5299509_3 lipoprotein involved in nitrous oxide reduction K19342 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001811 254.0
DYD3_k127_5299509_4 NosL K19342 - - 0.00000000000000000000000000000000000001693 148.0
DYD3_k127_5299509_5 Bacterial-like globin K06886 - - 0.00000000000000000000000000000005074 127.0
DYD3_k127_5312670_0 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009406 423.0
DYD3_k127_5312670_1 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002092 416.0
DYD3_k127_5312670_2 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003694 362.0
DYD3_k127_5312670_3 PFAM Glycosyl transferase family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003065 359.0
DYD3_k127_5316099_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 2.402e-307 952.0
DYD3_k127_5316099_1 TIGRFAM gliding motility-associated lipoprotein GldJ - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 617.0
DYD3_k127_5316099_3 PFAM Sigma 54 modulation protein S30EA ribosomal protein K05808 - - 0.0000001547 53.0
DYD3_k127_5317272_0 PFAM Cytochrome C - - - 0.0 1116.0
DYD3_k127_5317272_1 Xylose isomerase-like TIM barrel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 291.0
DYD3_k127_5317272_2 DinB superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001495 248.0
DYD3_k127_5317272_3 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002132 245.0
DYD3_k127_5317272_4 PLD-like domain - - - 0.00000000000000000000000000000000000000000000000008126 182.0
DYD3_k127_5317272_5 TIGRFAM gliding motility associated protien GldN - - - 0.00000001931 66.0
DYD3_k127_5352263_0 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007298 316.0
DYD3_k127_5352263_1 PFAM Sulfite exporter TauE SafE K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000009047 232.0
DYD3_k127_5352263_2 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533,K17686 - 3.6.3.4,3.6.3.54 0.000000000000000000000000000000000000000000000000000000000000001982 226.0
DYD3_k127_5352263_3 TIGRFAM cytochrome oxidase maturation protein, cbb3-type - - - 0.000000000006145 67.0
DYD3_k127_5360355_0 Peptidase family M3 K01284 - 3.4.15.5 0.0 1069.0
DYD3_k127_5360355_1 mandelate racemase muconate lactonizing - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006064 432.0
DYD3_k127_5360355_10 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000001627 248.0
DYD3_k127_5360355_11 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000001668 217.0
DYD3_k127_5360355_12 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000005638 203.0
DYD3_k127_5360355_13 - - - - 0.00000000000000000000000000000000000000000000000002747 188.0
DYD3_k127_5360355_14 NAD dependent epimerase/dehydratase family - - - 0.00000000000000000000000000000000000000000000002433 179.0
DYD3_k127_5360355_15 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000000001273 169.0
DYD3_k127_5360355_16 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000000352 160.0
DYD3_k127_5360355_17 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000001883 155.0
DYD3_k127_5360355_18 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000001592 147.0
DYD3_k127_5360355_19 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.00000000000000000000000000000000000002224 145.0
DYD3_k127_5360355_2 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004794 419.0
DYD3_k127_5360355_20 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.000000000000000000000000000000000000217 142.0
DYD3_k127_5360355_21 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000002165 136.0
DYD3_k127_5360355_22 domain, Protein - - - 0.0000000000000000005943 91.0
DYD3_k127_5360355_23 Belongs to the universal ribosomal protein uL29 family K02904 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000002021 80.0
DYD3_k127_5360355_3 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001595 396.0
DYD3_k127_5360355_4 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001981 308.0
DYD3_k127_5360355_5 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007098 307.0
DYD3_k127_5360355_6 Forms part of the polypeptide exit tunnel K02926 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 302.0
DYD3_k127_5360355_7 abc transporter (atp-binding protein) K02013 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001411 308.0
DYD3_k127_5360355_8 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000032 278.0
DYD3_k127_5360355_9 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000001255 251.0
DYD3_k127_5371465_0 Asparaginyl-tRNA synthetase K01893 - 6.1.1.22 5.392e-236 737.0
DYD3_k127_5371465_1 RNA polymerase, sigma-54 factor K03092 - - 3.605e-215 677.0
DYD3_k127_5371465_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002189 570.0
DYD3_k127_5371465_3 von Willebrand factor (vWF) type A domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009288 365.0
DYD3_k127_5371465_4 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001857 268.0
DYD3_k127_5371465_5 Bacterial regulatory proteins, tetR family K16137 - - 0.000000000000000000000000000000000000000000000000000000000000102 217.0
DYD3_k127_5371465_6 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000004091 115.0
DYD3_k127_5371465_7 phosphoesterase, PA-phosphatase related - - - 0.0000000000000003165 87.0
DYD3_k127_5376137_0 efflux transmembrane transporter activity K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002036 340.0
DYD3_k127_5378977_0 OmpA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003948 498.0
DYD3_k127_5378977_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004388 370.0
DYD3_k127_5378977_2 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001832 344.0
DYD3_k127_5378977_3 Outer membrane protein beta-barrel domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005305 247.0
DYD3_k127_5378977_4 ABC transporter K02193 - 3.6.3.41 0.0000000000000000000000000000005242 126.0
DYD3_k127_5378977_5 Belongs to the ompA family - - - 0.000000000000000000000000000009939 139.0
DYD3_k127_5379320_0 PFAM D-aminoacylase, C-terminal region K06015 - 3.5.1.81 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003706 584.0
DYD3_k127_5379320_1 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003677 436.0
DYD3_k127_5379320_2 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 - 3.1.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 363.0
DYD3_k127_5379320_3 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001204 264.0
DYD3_k127_5379320_4 Low molecular weight phosphotyrosine protein phosphatase K01104 - 3.1.3.48 0.000000000000000000000000000000000000000000000000001931 186.0
DYD3_k127_5386114_0 Major facilitator superfamily K08151 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 478.0
DYD3_k127_5386114_1 Histidinol phosphatase and related hydrolases of the PHP family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003891 475.0
DYD3_k127_5386114_2 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 361.0
DYD3_k127_5386114_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K01993 - - 0.00000000000000000000000000000000000000000000001725 178.0
DYD3_k127_5386114_4 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000001012 184.0
DYD3_k127_5386114_5 COGs COG0607 Rhodanese-related sulfurtransferase - - - 0.000000000000000000000000002125 115.0
DYD3_k127_5386114_6 Methyltransferase - - - 0.0000000000000009478 77.0
DYD3_k127_5390110_0 DNA polymerase Ligase (LigD) - - - 5.208e-312 972.0
DYD3_k127_5390110_1 Ammonium Transporter Family K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003967 399.0
DYD3_k127_5390110_2 PFAM FecR protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 370.0
DYD3_k127_5390110_3 Pentapeptide repeats (9 copies) - - - 0.00000000000000000000000000000000000000000000000599 180.0
DYD3_k127_5390110_4 Belongs to the P(II) protein family K04751 - - 0.000000000000000000000000000000000001878 140.0
DYD3_k127_5390110_5 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000001125 101.0
DYD3_k127_5390110_6 Domain of unknown function (DUF4184) - - - 0.0000000000000000002932 94.0
DYD3_k127_5399361_0 Acetyl xylan esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004563 402.0
DYD3_k127_5399361_1 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.00000000000000000000000000000000000000000000000000005455 189.0
DYD3_k127_5399361_2 Putative auto-transporter adhesin, head GIN domain - - - 0.000000000000000000000000000000000000000000000964 176.0
DYD3_k127_5399361_3 PFAM Uncharacterised protein family UPF0029, Impact, N-terminal - - - 0.0000000000000000000000000000000000014 143.0
DYD3_k127_540556_0 beta-1,4-mannooligosaccharide phosphorylase K21065 - 3.2.1.197 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 464.0
DYD3_k127_540556_1 sequence-specific DNA binding - - - 0.00000000000000002475 83.0
DYD3_k127_540556_2 PFAM Plasmid stabilisation system K06218 - - 0.000000004152 61.0
DYD3_k127_5418938_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 7.35e-213 672.0
DYD3_k127_5418938_1 Peptidase M14, carboxypeptidase A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009298 434.0
DYD3_k127_5418938_2 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533,K17686 - 3.6.3.4,3.6.3.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009243 368.0
DYD3_k127_5418938_3 TIGRFAM endoribonuclease L-PSP K09022 - 3.5.99.10 0.00000000000000000000000000000000000000000000000003165 181.0
DYD3_k127_5418938_4 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000004168 153.0
DYD3_k127_5418938_5 Protein of unknown function DUF86 - - - 0.00000000000000000000000001154 112.0
DYD3_k127_5418938_6 - - - - 0.00000000001283 68.0
DYD3_k127_5418938_7 Nucleotidyltransferase domain K07075 - - 0.000000000724 63.0
DYD3_k127_5427365_0 MacB-like periplasmic core domain - - - 2.284e-289 912.0
DYD3_k127_5427365_1 FtsX-like permease family K02004 - - 1.016e-200 634.0
DYD3_k127_5427365_2 DinB family - - - 0.000000000000000000000000000000000000000000000000001243 186.0
DYD3_k127_5437844_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533,K17686 - 3.6.3.4,3.6.3.54 0.0 1072.0
DYD3_k127_5437844_1 COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL CutL homologs K07303 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003648 524.0
DYD3_k127_5437844_2 PFAM Bacterial regulatory helix-turn-helix proteins, AraC family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008956 241.0
DYD3_k127_5437844_3 Belongs to the RelE toxin family K19092 - - 0.0000000000000000000000000001198 118.0
DYD3_k127_5437844_4 mercury ion transmembrane transporter activity K07213,K08364 - - 0.00000000000000000001751 92.0
DYD3_k127_5437844_5 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH K07746 - - 0.0000000000000000000253 93.0
DYD3_k127_5437844_6 - - - - 0.0000000000004374 74.0
DYD3_k127_5437844_7 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787,K15726 - - 0.00001017 47.0
DYD3_k127_5437844_8 Heavy-metal-associated domain K07213 - - 0.00008963 47.0
DYD3_k127_5447664_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0 1677.0
DYD3_k127_5447664_1 beta-glucosidase 2, glycosyl-hydrolase family 116 N-term K17108 - 3.2.1.45 0.0 1248.0
DYD3_k127_5447664_10 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003698 304.0
DYD3_k127_5447664_11 AAA domain, putative AbiEii toxin, Type IV TA system K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005272 295.0
DYD3_k127_5447664_12 Outer membrane lipoprotein-sorting protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002858 294.0
DYD3_k127_5447664_13 Putative PepSY_TM-like K09939 - - 0.0000000000000000000000000000000000000000000000000000000000000000000005976 241.0
DYD3_k127_5447664_14 photoreceptor activity - - - 0.000000000000000000000000000000000000000000000000000000000000001518 234.0
DYD3_k127_5447664_15 Pyridoxamine 5'-phosphate oxidase like - - - 0.000000000000000000000000000000000000000000000000000000001522 204.0
DYD3_k127_5447664_16 SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000000000000001191 204.0
DYD3_k127_5447664_17 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000002473 147.0
DYD3_k127_5447664_19 - - - - 0.000000000000000000007119 98.0
DYD3_k127_5447664_2 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001985 591.0
DYD3_k127_5447664_20 PIN domain - - - 0.000000000001191 70.0
DYD3_k127_5447664_3 PFAM Peptidase family M20 M25 M40 K01436 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007305 547.0
DYD3_k127_5447664_4 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000315 486.0
DYD3_k127_5447664_5 PFAM cobalamin (vitamin B12) biosynthesis CbiX protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001781 386.0
DYD3_k127_5447664_6 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006515 388.0
DYD3_k127_5447664_7 Pfam Xylose - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002391 370.0
DYD3_k127_5447664_8 conserved protein (COG2071) K09166 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004418 316.0
DYD3_k127_5447664_9 ABC-type transport system involved in lipoprotein release permease component K09808 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005464 310.0
DYD3_k127_5456774_0 COGs COG0491 Zn-dependent hydrolase including glyoxylase - - - 1.887e-202 638.0
DYD3_k127_5456774_1 Inner membrane protein CreD K06143 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004167 371.0
DYD3_k127_5456774_2 Serine aminopeptidase, S33 K06889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001863 304.0
DYD3_k127_5456774_3 membrane - - - 0.00000000000000000000000000000000000000000000000000000001631 204.0
DYD3_k127_5456774_4 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K07141,K19190 - 1.1.1.328,2.7.7.76 0.000000000000000000000000000000000000002143 153.0
DYD3_k127_5456774_5 transcriptional regulator - - - 0.0000000000000000000000000000000001294 134.0
DYD3_k127_5456774_6 Alpha/beta hydrolase family K07020 - - 0.0000000000000000000000000000004779 124.0
DYD3_k127_5456774_7 hydrolase of the alpha beta-hydrolase fold K07020 - - 0.00000004211 54.0
DYD3_k127_5478903_0 fatty acid desaturase K00508 - 1.14.19.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004609 472.0
DYD3_k127_5478903_1 beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004981 449.0
DYD3_k127_5478903_2 NAD dependent epimerase/dehydratase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004549 306.0
DYD3_k127_5478903_3 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000001056 182.0
DYD3_k127_5478903_4 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000000007391 163.0
DYD3_k127_5478903_5 Pathogenicity locus - - - 0.000000000000000000000000000000000000000001051 167.0
DYD3_k127_5478903_6 AraC family transcriptional regulator K13530 GO:0003674,GO:0003700,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2001141 - 0.000000000000002509 86.0
DYD3_k127_5478903_7 phosphoserine phosphatase activity - - - 0.00000000001827 78.0
DYD3_k127_5494687_0 PFAM glycoside hydrolase family 39 K01198 - 3.2.1.37 7.356e-269 836.0
DYD3_k127_5494687_1 MacB-like periplasmic core domain K02004 - - 8.018e-247 789.0
DYD3_k127_5494687_2 MacB-like periplasmic core domain - - - 8.111e-226 728.0
DYD3_k127_5494687_3 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003772 436.0
DYD3_k127_5494687_4 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.000000000000000000000000000000000000000000000000000000000219 219.0
DYD3_k127_5494687_5 - - - - 0.0000000000000000000000000000000000000002299 154.0
DYD3_k127_5494687_6 cheY-homologous receiver domain - - - 0.00000000000000000000004279 103.0
DYD3_k127_5494687_7 Protein of unknown function (DUF3592) - - - 0.0005446 45.0
DYD3_k127_5501668_0 PFAM Glycosyl transferase family 2 K00786 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003391 564.0
DYD3_k127_5501668_1 sulfatase K01138 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004419 431.0
DYD3_k127_5501668_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004028 288.0
DYD3_k127_5501668_3 PFAM Stress responsive alpha-beta barrel - - - 0.0000000000000000000000000000000000000000001102 163.0
DYD3_k127_5501668_4 cheY-homologous receiver domain - - - 0.00000000000000000000000000002123 121.0
DYD3_k127_5501668_5 lyase activity - - - 0.00000000000000000002104 104.0
DYD3_k127_5504975_0 His Kinase A (phosphoacceptor) domain - - - 1.22e-201 647.0
DYD3_k127_5504975_1 Histidine biosynthesis bifunctional protein HisB K01089,K01693 GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.1.3.15,4.2.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009366 519.0
DYD3_k127_5504975_2 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001661 507.0
DYD3_k127_5504975_3 ATP phosphoribosyltransferase K00765 GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003809 392.0
DYD3_k127_5504975_4 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817,K04720 - 2.6.1.9,4.1.1.81 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008639 385.0
DYD3_k127_5504975_5 PFAM Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000002155 205.0
DYD3_k127_5504975_6 Sigma-54 interaction domain - - - 0.000000000000000000000000000000000000000000000000000006068 192.0
DYD3_k127_5504975_7 pfam nudix - - - 0.000000000000000000000000000000000000000000000008504 179.0
DYD3_k127_5504975_8 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.0000000000000000000000000000000000000000000005454 171.0
DYD3_k127_5514471_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 2.033e-194 614.0
DYD3_k127_5514471_1 Oxidoreductase family, NAD-binding Rossmann fold K16044 - 1.1.1.371 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007658 421.0
DYD3_k127_5514471_2 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001701 300.0
DYD3_k127_5514471_3 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates - - - 0.0000000000000000000000000000000000001425 146.0
DYD3_k127_5514471_4 TIGRFAM Acidobacterial duplicated orphan permease - - - 0.00000000000000000000009435 99.0
DYD3_k127_5514471_5 - - - - 0.0000000000000000000629 98.0
DYD3_k127_5514471_6 Helix-turn-helix XRE-family like proteins - - - 0.0000000001271 64.0
DYD3_k127_5514471_7 Endonuclease I - - - 0.0004135 53.0
DYD3_k127_5522675_0 FAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001908 388.0
DYD3_k127_5522675_1 PFAM chalcone and stilbene - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002262 373.0
DYD3_k127_5522675_2 Methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000007789 224.0
DYD3_k127_5522675_3 Addiction module toxin, Txe YoeB K19158 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0005488,GO:0006139,GO:0006379,GO:0006401,GO:0006402,GO:0006417,GO:0006446,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0016070,GO:0016071,GO:0016458,GO:0016787,GO:0016788,GO:0016892,GO:0016894,GO:0017148,GO:0019222,GO:0019439,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0034248,GO:0034249,GO:0034641,GO:0034655,GO:0042710,GO:0043021,GO:0043024,GO:0043170,GO:0044010,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044764,GO:0044877,GO:0045947,GO:0046483,GO:0046700,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051704,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0098795,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:2000112,GO:2000113 - 0.0002896 45.0
DYD3_k127_553079_0 FAD linked oxidases, C-terminal domain K00102,K00104 - 1.1.2.4,1.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000209 608.0
DYD3_k127_553079_1 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000003498 198.0
DYD3_k127_553079_2 Cell wall-associated hydrolase (invasion-associated protein) K13695 - - 0.000000000000000000000000000000000009683 143.0
DYD3_k127_5534589_0 MacB-like periplasmic core domain K02004 - - 3.028e-195 636.0
DYD3_k127_5534589_1 Domain of unknown function (DU1801) - - - 0.000000000000000000007252 97.0
DYD3_k127_5534589_2 - - - - 0.000000000005462 74.0
DYD3_k127_5544132_0 TIGRFAM Gliding motility-associated lipoprotein GldK - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003587 587.0
DYD3_k127_5544132_1 TIGRFAM dihydroorotase, multifunctional complex type K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 586.0
DYD3_k127_5544132_10 PFAM Bacterial lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.00000000000000000000000000000000000000000000000000000000000000000000204 245.0
DYD3_k127_5544132_11 methyltransferase - - - 0.000000000000000000000000000000000000000000000000007509 190.0
DYD3_k127_5544132_12 - - - - 0.0000000000000000000005414 103.0
DYD3_k127_5544132_13 - - - - 0.0000000000000000001122 93.0
DYD3_k127_5544132_14 - - - - 0.00000000002646 71.0
DYD3_k127_5544132_2 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006641 487.0
DYD3_k127_5544132_3 Uroporphyrinogen-III synthase K01719 - 4.2.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706 405.0
DYD3_k127_5544132_4 TIGRFAM gliding motility-associated protein GldL - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000935 352.0
DYD3_k127_5544132_5 Type IX secretion system membrane protein PorP/SprF - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003013 350.0
DYD3_k127_5544132_6 TIGRFAM Gliding motility-associated protein GldM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005416 351.0
DYD3_k127_5544132_7 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002029 329.0
DYD3_k127_5544132_8 Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P) K07094 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001383 284.0
DYD3_k127_5544132_9 TIGRFAM gliding motility associated protien GldN - - - 0.00000000000000000000000000000000000000000000000000000000000000000000109 246.0
DYD3_k127_555620_0 efflux protein, MATE family K03327 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 457.0
DYD3_k127_555620_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 382.0
DYD3_k127_555620_2 carbohydrate metabolic process - - - 0.000000000000000000000000000000000000000000000002311 182.0
DYD3_k127_5571846_0 TIGRFAM FeS assembly protein SufB K09014 - - 6.318e-283 872.0
DYD3_k127_5571846_1 TIGRFAM FeS assembly ATPase SufC K09013 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 417.0
DYD3_k127_5571846_2 helix_turn_helix ASNC type K03718 - - 0.000000000000000000000000000000000000000000000000000000000000000635 223.0
DYD3_k127_5571846_3 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K01897 - 6.2.1.3 0.00000000000000000000000000000000000000002193 158.0
DYD3_k127_5574631_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 6.192e-249 784.0
DYD3_k127_5574631_1 TPM domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008081 339.0
DYD3_k127_5574631_2 ABC-2 type transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004481 336.0
DYD3_k127_5574631_3 PFAM Phosphoribosyl-ATP pyrophosphohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000756 222.0
DYD3_k127_5574631_4 Acetyltransferase (GNAT) domain - - - 0.00000000001631 66.0
DYD3_k127_5576913_0 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 2.83e-276 857.0
DYD3_k127_5576913_1 PFAM Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009611 280.0
DYD3_k127_5576913_2 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007905 264.0
DYD3_k127_5590392_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 1.434e-308 957.0
DYD3_k127_5590392_1 ABC-2 type transporter K21397 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005384 562.0
DYD3_k127_5590392_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009468 301.0
DYD3_k127_5590392_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000101 214.0
DYD3_k127_5590392_4 Protein of unknown function (DUF3667) - - - 0.000000000000000000000000000004924 129.0
DYD3_k127_5590392_5 - - - - 0.0000000000000001071 81.0
DYD3_k127_5607814_0 PFAM ABC transporter - - - 2.24e-214 687.0
DYD3_k127_5607814_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004912 428.0
DYD3_k127_5607814_2 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003253 267.0
DYD3_k127_5607814_3 Fibrillarin - - - 0.000000000000000000000000000000000000000000000000003045 188.0
DYD3_k127_5607814_4 Cold shock protein domain - - - 0.0000000000000000000000000000000000000001607 154.0
DYD3_k127_5607814_5 'Cold-shock' DNA-binding domain K03704 - - 0.00000000000000000000000002092 109.0
DYD3_k127_5607814_6 PFAM RNP-1 like RNA-binding protein - - - 0.0000000000000000005242 89.0
DYD3_k127_5612438_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1214.0
DYD3_k127_5612438_1 PFAM Glycoside hydrolase, family 37 K01194 - 3.2.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001792 612.0
DYD3_k127_5612438_2 PFAM Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002116 550.0
DYD3_k127_5612438_3 Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000573 475.0
DYD3_k127_5612438_4 Domain of unknown function (DUF4105) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002998 382.0
DYD3_k127_5612438_5 PFAM periplasmic binding protein K02016 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006541 375.0
DYD3_k127_5612438_6 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000008902 250.0
DYD3_k127_5612438_7 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000001213 240.0
DYD3_k127_5612438_8 Involved in the binding of tRNA to the ribosomes K02946 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000006459 190.0
DYD3_k127_5622098_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0 1666.0
DYD3_k127_5622098_1 Belongs to the methyltransferase superfamily K07444 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004428 507.0
DYD3_k127_5622098_2 Ribose-phosphate pyrophosphokinase K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008955 499.0
DYD3_k127_5622098_3 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000001524 240.0
DYD3_k127_5622098_5 PFAM Biotin lipoate A B protein ligase K03524 - 6.3.4.15 0.0000000000000000000000000003887 118.0
DYD3_k127_5622098_6 long-chain fatty acid transport protein - - - 0.0000000000000000000000002731 111.0
DYD3_k127_5630182_0 2-oxoglutarate dehydrogenase, E1 K00164 - 1.2.4.2 0.0 1367.0
DYD3_k127_5630182_1 Dihydrolipoyl dehydrogenase K00382 - 1.8.1.4 4.495e-235 733.0
DYD3_k127_5630182_10 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002071 322.0
DYD3_k127_5630182_11 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000005907 209.0
DYD3_k127_5630182_12 PFAM Rhomboid family K09650 - 3.4.21.105 0.0000000000000000000000000000000000000000000000000000008257 198.0
DYD3_k127_5630182_13 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.000000000000000000000000002268 114.0
DYD3_k127_5630182_14 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.0000000000000000000002408 102.0
DYD3_k127_5630182_15 - - - - 0.0000000000000000006789 88.0
DYD3_k127_5630182_2 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 5.815e-217 689.0
DYD3_k127_5630182_3 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 2.217e-202 641.0
DYD3_k127_5630182_4 Oxygen tolerance - - - 4.692e-194 617.0
DYD3_k127_5630182_5 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K11102 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005774 577.0
DYD3_k127_5630182_6 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 567.0
DYD3_k127_5630182_7 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002076 472.0
DYD3_k127_5630182_8 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007213 352.0
DYD3_k127_5630182_9 PFAM Rhomboid family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006461 351.0
DYD3_k127_5632451_0 Belongs to the peptidase M16 family - - - 0.0 1024.0
DYD3_k127_5632451_1 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.0 1016.0
DYD3_k127_5632451_2 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009307 445.0
DYD3_k127_5643612_0 Glycosyltransferase, group 1 family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004104 433.0
DYD3_k127_5643612_1 Belongs to the glycosyl hydrolase 57 family K07405 - 3.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006992 426.0
DYD3_k127_5650646_0 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002173 369.0
DYD3_k127_5650646_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000421 310.0
DYD3_k127_5650646_2 Domain of unknown function (DUF1905) - - - 0.000000000000000000000000000000000000000000000000002018 186.0
DYD3_k127_5650646_3 phospholipase Carboxylesterase - - - 0.00000000000000000000000000000004854 135.0
DYD3_k127_5650646_4 Belongs to the pirin family K06911 - - 0.0000000000000000000000000003266 113.0
DYD3_k127_5650646_5 GAF domain - - - 0.00000000000000000001635 91.0
DYD3_k127_5653913_0 ATPases associated with a variety of cellular activities K02017 - 3.6.3.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 357.0
DYD3_k127_5653913_1 PFAM binding-protein-dependent transport systems inner membrane component K02018 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005627 308.0
DYD3_k127_5653913_2 Bacterial extracellular solute-binding protein K02020 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001317 258.0
DYD3_k127_5653913_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.00000000000000000000000000000000000000000000000000000000000001988 216.0
DYD3_k127_5653913_4 molybdate ion transport - - - 0.000000000000003221 81.0
DYD3_k127_5667618_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1434.0
DYD3_k127_5667618_1 Peptidase family C25 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007137 579.0
DYD3_k127_5667618_10 - - - - 0.0000005539 52.0
DYD3_k127_5667618_2 Calcineurin-like phosphoesterase superfamily domain K07098 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003646 526.0
DYD3_k127_5667618_3 TIGRFAM L-asparaginases, type I K01424 - 3.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 431.0
DYD3_k127_5667618_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003508 348.0
DYD3_k127_5667618_5 PFAM Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003516 340.0
DYD3_k127_5667618_6 PFAM Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000005471 205.0
DYD3_k127_5667618_7 TIGRFAM RNA polymerase sigma factor, sigma-70 family - - - 0.000000000000000000000000000000000000000000000000000002848 197.0
DYD3_k127_5667618_8 - - - - 0.0000000000000002345 83.0
DYD3_k127_5667618_9 PFAM MotA TolQ ExbB proton channel family K03561 - - 0.000000007545 59.0
DYD3_k127_5684426_0 Protein of unknown function (DUF2911) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001488 332.0
DYD3_k127_5684426_1 RNA ligase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004515 273.0
DYD3_k127_5684426_2 Protein of unknown function (DUF418) K07148 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001204 280.0
DYD3_k127_5684426_4 - - - - 0.0000000000005831 69.0
DYD3_k127_5703375_0 PFAM Peptidase M16 inactive domain K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002186 558.0
DYD3_k127_5703375_1 Cytochrome c biogenesis protein transmembrane region K04084 - 1.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 337.0
DYD3_k127_5703375_2 Acetyl propionyl-CoA carboxylase alpha subunit K01960 - 6.4.1.1 0.00000000000000000000000000000000000000000000000003511 184.0
DYD3_k127_5703375_3 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 - 4.6.1.12 0.000000000000000006168 83.0
DYD3_k127_5710771_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005688 563.0
DYD3_k127_5710771_1 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 476.0
DYD3_k127_5710771_2 O-Methyltransferase K00545 - 2.1.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006177 283.0
DYD3_k127_5710771_3 Uncharacterised ACR (DUF711) K09157 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003026 276.0
DYD3_k127_5710771_4 Domain of unknown function (DU1801) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003331 260.0
DYD3_k127_5710771_5 Fic/DOC family K07341 - - 0.00000000000000000000000000000000000001728 147.0
DYD3_k127_5715048_0 OmpA family - - - 3.487e-205 650.0
DYD3_k127_5715048_1 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008337 584.0
DYD3_k127_5715048_2 zinc metalloprotease K11749 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 480.0
DYD3_k127_5715048_3 Protein of unknown function DUF86 - - - 0.0000000000001565 72.0
DYD3_k127_5715048_4 Protein of unknown function DUF86 - - - 0.0000008115 52.0
DYD3_k127_5723835_0 Oxidoreductase - - - 1.662e-300 930.0
DYD3_k127_5723835_1 PFAM Peptidase M16 inactive domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000827 464.0
DYD3_k127_5723835_2 COG0604 NADPH quinone reductase and related Zn-dependent - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000199 348.0
DYD3_k127_5723835_3 PFAM Phosphorylase superfamily K00757 - 2.4.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002565 331.0
DYD3_k127_5723835_4 PFAM O-methyltransferase K00588 - 2.1.1.104 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003294 284.0
DYD3_k127_5723835_6 - - - - 0.00000003252 56.0
DYD3_k127_5733236_0 PFAM ASPIC and UnbV - - - 0.0 1148.0
DYD3_k127_5733236_1 Belongs to the glycosyl hydrolase 2 family - - - 8.37e-321 1008.0
DYD3_k127_5733236_2 hydrolase, family 65, central catalytic - - - 2.205e-284 889.0
DYD3_k127_5733236_3 Highly conserved protein containing a thioredoxin domain K06888 - - 1.848e-235 747.0
DYD3_k127_5733236_4 PAP2 superfamily - - - 8.592e-219 689.0
DYD3_k127_5733236_5 Glucose / Sorbosone dehydrogenase - - - 1.464e-195 625.0
DYD3_k127_5733236_6 CarboxypepD_reg-like domain - - - 0.0000000000000000000000000000000000000000000328 174.0
DYD3_k127_5733236_7 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.0000002778 52.0
DYD3_k127_5737975_0 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K01706 - 4.2.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001675 611.0
DYD3_k127_5737975_1 H gluconate symporter and related K03299 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 592.0
DYD3_k127_5737975_2 carboxylic acid catabolic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004009 479.0
DYD3_k127_5737975_3 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007464 475.0
DYD3_k127_5737975_4 COGs COG2610 H gluconate symporter and related permease K03299 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001903 428.0
DYD3_k127_5737975_5 KR domain K00046 - 1.1.1.69 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002607 411.0
DYD3_k127_5737975_6 6-phosphogluconolactonase K07404 - 3.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007589 364.0
DYD3_k127_5737975_7 Belongs to the HpcH HpaI aldolase family K01630,K02510,K12660 - 4.1.2.20,4.1.2.52,4.1.2.53 0.0000000000000000000000000000000000000000000000000000000000000000000000002223 254.0
DYD3_k127_5737975_8 Membrane-bound dehydrogenase domain protein - - - 0.0000000000009871 68.0
DYD3_k127_5745372_0 Phosphate-selective porin O and P - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003234 558.0
DYD3_k127_5745372_1 Y_Y_Y domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002581 509.0
DYD3_k127_5745372_10 NifU-like N terminal domain K04488 - - 0.0000000000000000000001209 102.0
DYD3_k127_5745372_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001549 446.0
DYD3_k127_5745372_3 Domain of unknown function (DUF1611_N) Rossmann-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000067 433.0
DYD3_k127_5745372_4 Beta-lactamase enzyme family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 398.0
DYD3_k127_5745372_5 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003813 394.0
DYD3_k127_5745372_6 domain, Protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006105 293.0
DYD3_k127_5745372_7 Protein of unknown function (DUF1211) - - - 0.000000000000000000000000000000000000000000000000000000000000000004969 235.0
DYD3_k127_5745372_8 CBS domain - - - 0.000000000000000000000000000004913 124.0
DYD3_k127_5745372_9 CBS domain - - - 0.0000000000000000000000000001574 119.0
DYD3_k127_5745569_0 Alpha-2-Macroglobulin K06894 - - 0.0 1693.0
DYD3_k127_5745569_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307,K14387 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002762 485.0
DYD3_k127_5745569_10 - - - - 0.0000000000000000000000000000000000002405 146.0
DYD3_k127_5745569_11 Metal binding domain of Ada - - - 0.0000000000000000000000003685 106.0
DYD3_k127_5745569_12 biopolymer transport protein K03832 - - 0.0000008834 50.0
DYD3_k127_5745569_2 COGs COG2270 Permease of the major facilitator superfamily K06902 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001976 481.0
DYD3_k127_5745569_3 Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile K01241 - 3.2.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001821 412.0
DYD3_k127_5745569_4 Xylose isomerase-like TIM barrel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006239 330.0
DYD3_k127_5745569_5 Bacterial lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003518 295.0
DYD3_k127_5745569_6 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.0000000000000000000000000000000000000000000000000000000000000000007553 238.0
DYD3_k127_5745569_7 Biopolymer transport protein ExbD/TolR K03559 - - 0.000000000000000000000000000000000000000000000000000001375 195.0
DYD3_k127_5745569_8 PFAM Phosphoglycerate mutase K08296 - - 0.000000000000000000000000000000000000000000000000000007948 193.0
DYD3_k127_5745569_9 Type I restriction enzyme R Protein - - - 0.000000000000000000000000000000000000000000000006231 175.0
DYD3_k127_5749883_0 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 1.42e-321 994.0
DYD3_k127_5749883_1 Alpha beta hydrolase K07019 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002478 353.0
DYD3_k127_5749883_2 Belongs to the SOS response-associated peptidase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001861 283.0
DYD3_k127_5749883_3 DinB superfamily - - - 0.000000000000000000000000000000000000000000000000000002339 195.0
DYD3_k127_5749883_4 PFAM Integral membrane protein TerC - - - 0.000000000000000000000000000000000000000000000000006192 188.0
DYD3_k127_5749883_6 - - - - 0.00000000001378 67.0
DYD3_k127_5752768_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.0 1023.0
DYD3_k127_5752768_1 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005566 482.0
DYD3_k127_5752768_2 Putative modulator of DNA gyrase K03568 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004889 398.0
DYD3_k127_5752768_3 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K02080,K02564 - 3.5.99.6 0.0000000000000000000000000000000000000000000000000000000000000000009871 235.0
DYD3_k127_5752768_4 protein histidine kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000002898 235.0
DYD3_k127_5752768_5 Putative modulator of DNA gyrase - - - 0.00000000000000000000000000000000000000000000000000000000000004194 234.0
DYD3_k127_5759700_0 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000537 466.0
DYD3_k127_5759700_1 Ndr family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002343 248.0
DYD3_k127_5768881_0 translation initiation factor activity K03699 - - 0.00000000000000000000000000000000000000000000000000000000000000003691 234.0
DYD3_k127_5768881_1 lactoylglutathione lyase activity - - - 0.000000000000000001272 96.0
DYD3_k127_5768881_2 metallopeptidase activity K20276 - - 0.000000000001597 80.0
DYD3_k127_5768881_4 - - - - 0.0002845 49.0
DYD3_k127_5770748_0 NUMOD4 motif - - - 0.0000000000000000002194 96.0
DYD3_k127_5770748_2 Glycosyl transferase, family 2 - - - 0.00000001744 64.0
DYD3_k127_5770748_3 cyclopropane-fatty-acyl-phospholipid synthase - - - 0.0001077 51.0
DYD3_k127_5770748_4 Glycosyl transferase, family 2 - - - 0.0003393 50.0
DYD3_k127_5784_0 Anthranilate synthase component I, N terminal region K01657 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001524 561.0
DYD3_k127_5784_1 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18,4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 438.0
DYD3_k127_5784_2 Belongs to the TrpC family K01609 GO:0003674,GO:0003824,GO:0004425,GO:0016829,GO:0016830,GO:0016831 4.1.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000008859 256.0
DYD3_k127_5784_3 TIGRFAM glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase K01658 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000001644 252.0
DYD3_k127_5784_4 Belongs to the TrpF family K01817 - 5.3.1.24 0.0000000000000000000000000000000000000001318 154.0
DYD3_k127_5784_5 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins K03817 - - 0.000000000000000000000000000004534 124.0
DYD3_k127_5787023_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000001093 186.0
DYD3_k127_5787023_1 Response regulator of the LytR AlgR family - - - 0.0000000000000000000000000000000000000000003636 167.0
DYD3_k127_5787023_2 LytTr DNA-binding domain - - - 0.000000000001551 72.0
DYD3_k127_5787023_3 arginyl-trna synthetase - - - 0.00000000002223 75.0
DYD3_k127_5787023_4 Antibiotic biosynthesis monooxygenase - - - 0.00005724 46.0
DYD3_k127_5787023_5 - - - - 0.0003525 44.0
DYD3_k127_5800953_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 7.988e-234 730.0
DYD3_k127_5800953_1 PFAM Major Facilitator Superfamily K08191 - - 2.302e-226 707.0
DYD3_k127_5800953_2 Putative oxidoreductase C terminal domain - - - 2.65e-199 632.0
DYD3_k127_5800953_3 Glucuronate isomerase K01812 - 5.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005197 612.0
DYD3_k127_5800953_4 Methane oxygenase PmoA - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 527.0
DYD3_k127_5800953_5 Trehalose utilisation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006212 377.0
DYD3_k127_5800953_6 Methane oxygenase PmoA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 379.0
DYD3_k127_5800953_7 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 341.0
DYD3_k127_5800953_8 - - - - 0.000000000000000000000000000000000000000000003168 172.0
DYD3_k127_5800953_9 PFAM Outer membrane protein transport protein (OMPP1 FadL TodX) - - - 0.0000001749 55.0
DYD3_k127_5814890_0 Two component regulator three Y - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002996 366.0
DYD3_k127_5814890_1 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006632 337.0
DYD3_k127_5814890_2 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000336 272.0
DYD3_k127_5814890_3 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.00000000000000000000000000000000000000000000000000000000000003561 222.0
DYD3_k127_5814890_4 membrane - - - 0.00000000000000000000000000000000000004231 149.0
DYD3_k127_5814890_5 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000000009827 111.0
DYD3_k127_5814890_6 TIGRFAM TonB-dependent outer membrane receptor, SusC RagA subfamily, signature region - - - 0.0000000000000009893 78.0
DYD3_k127_582248_0 PFAM Glutamyl glutaminyl-tRNA synthetase, class Ic, catalytic domain K01886 - 6.1.1.18 5.916e-287 888.0
DYD3_k127_582248_1 ABC transporter K06158 - - 2.226e-273 853.0
DYD3_k127_582248_10 - - - - 0.000000000000000003852 86.0
DYD3_k127_582248_11 - - - - 0.00000000007709 66.0
DYD3_k127_582248_12 - - - - 0.00000005106 63.0
DYD3_k127_582248_2 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001309 522.0
DYD3_k127_582248_3 Domain of unknown function (DUF5103) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001451 359.0
DYD3_k127_582248_4 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000008161 250.0
DYD3_k127_582248_5 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000000000000000000000000001103 211.0
DYD3_k127_582248_6 Fumarylacetoacetate (FAA) hydrolase family K16165 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005829,GO:0008948,GO:0016787,GO:0016822,GO:0016823,GO:0016829,GO:0016830,GO:0016831,GO:0018773,GO:0031974,GO:0031981,GO:0034545,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0070013 3.7.1.20 0.00000000000000000000000000000000000000000000000000000000001973 208.0
DYD3_k127_582248_7 PFAM Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000002243 133.0
DYD3_k127_582248_8 Major Facilitator Superfamily - - - 0.00000000000000000000000000000003085 129.0
DYD3_k127_582248_9 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane K16076,K18093 - - 0.0000000000000000004739 101.0
DYD3_k127_583682_0 PFAM Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000218 389.0
DYD3_k127_583682_1 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000001443 211.0
DYD3_k127_583682_2 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000001458 187.0
DYD3_k127_583682_3 PFAM NAD dependent epimerase dehydratase family K07071 - - 0.00000000000000000000000000000000000000000006654 166.0
DYD3_k127_583682_5 - - - - 0.00007118 52.0
DYD3_k127_5851774_0 ABC-2 type transporter K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008716 502.0
DYD3_k127_5851774_1 transport, permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007843 478.0
DYD3_k127_5851774_2 SIS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003403 253.0
DYD3_k127_5851774_3 DinB superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000004039 227.0
DYD3_k127_5851774_4 - - - - 0.00000000000000000000000000000000000000000000001362 184.0
DYD3_k127_5851774_5 Phospholipid methyltransferase - - - 0.0000000000000000000000000000000142 128.0
DYD3_k127_5851774_6 Rieske [2Fe-2S] domain K05710 - - 0.000000000000000000002013 96.0
DYD3_k127_5851774_7 GntR family K03710 - - 0.0000000000000000418 85.0
DYD3_k127_5851774_8 PFAM Peptidase family M20 M25 M40 K01436 - - 0.00000000004256 66.0
DYD3_k127_5864036_0 ABC-2 type transporter - - - 0.0 1158.0
DYD3_k127_5864036_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002383 320.0
DYD3_k127_5864036_2 GTP-binding protein TypA K06207 - - 0.00000000000000000000000000000000000000000000000000000000000000001051 228.0
DYD3_k127_5864036_3 cheY-homologous receiver domain - - - 0.000000000000000000000000003764 115.0
DYD3_k127_5867738_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 3.49e-218 681.0
DYD3_k127_5867738_1 Phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01835 - 5.4.2.2 9.956e-212 670.0
DYD3_k127_5867738_2 TIGRFAM MiaB-like tRNA modifying enzyme K18707 - 2.8.4.5 2.816e-210 661.0
DYD3_k127_5867738_3 Part of the ABC transporter complex LolCDE involved in the translocation of K09810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004943 304.0
DYD3_k127_5867738_4 Protein of unknown function (DUF1572) - - - 0.00000000000000000000000000000000000000000000000007517 181.0
DYD3_k127_5867738_5 long-chain fatty acid transport protein - - - 0.00000000000000000000000000000000000000000006038 167.0
DYD3_k127_5874055_0 TonB-linked outer membrane protein, SusC RagA family - - - 4.085e-317 990.0
DYD3_k127_5874055_1 PFAM Mandelate racemase muconate lactonizing enzyme, C-terminal K01684 - 4.2.1.6 1.469e-242 753.0
DYD3_k127_5874055_2 PFAM Aldehyde dehydrogenase K13877 - 1.2.1.26 7.306e-224 705.0
DYD3_k127_5874055_3 Starch-binding associating with outer membrane - - - 2.567e-203 645.0
DYD3_k127_5874055_4 SPTR Demethylmenaquinone methyltransferase-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 539.0
DYD3_k127_5874055_5 PFAM Bile acid sodium symporter K03453 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000241 480.0
DYD3_k127_5874055_6 COGs COG3970 Fumarylacetoacetate (FAA) hydrolase family protein K14259 - 4.2.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001946 403.0
DYD3_k127_5884925_0 Threonine synthase K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002359 515.0
DYD3_k127_5884925_1 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006465 258.0
DYD3_k127_5884925_2 COGs COG2208 Serine phosphatase RsbU regulator of sigma subunit - - - 0.0000000000000000000000000000000000000000000000000000000001458 217.0
DYD3_k127_5884925_3 Putative lumazine-binding - - - 0.000000000000000000000000000000000009117 141.0
DYD3_k127_5884925_4 Histidine phosphatase superfamily (branch 1) - - - 0.0000000000000000000001988 104.0
DYD3_k127_5884925_5 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 - 2.7.1.39 0.0000000001979 62.0
DYD3_k127_594404_0 Belongs to the helicase family. UvrD subfamily K03657 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007151 591.0
DYD3_k127_594404_1 Gliding motility-associated C-terminal domain - - - 0.0000000000000000000000000000005717 130.0
DYD3_k127_5971024_0 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 3.454e-306 960.0
DYD3_k127_5971024_1 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005603 510.0
DYD3_k127_5971024_2 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002386 394.0
DYD3_k127_5971024_3 Psort location Cytoplasmic, score 8.96 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005937 306.0
DYD3_k127_5971024_4 1-aminocyclopropane-1-carboxylate deaminase K01505 - 3.5.99.7 0.000000000000000000000000000000000000000000000000000000000000000000000000004331 261.0
DYD3_k127_5971024_5 Sodium proton K03316 - - 0.0000000000000000000000000000000000000001429 157.0
DYD3_k127_5972840_0 - Catabolite gene activator and regulatory subunit of cAMP-dependent protein - - - 5.554e-309 978.0
DYD3_k127_5972840_1 carbonic anhydrase acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002089 259.0
DYD3_k127_5972840_2 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.0000000000000000000000000000000000000000000000000000000000000000001745 233.0
DYD3_k127_5972840_3 PFAM Outer membrane chaperone Skp (OmpH) K06142 - - 0.0000000000000000000000000000000000000000000001473 174.0
DYD3_k127_5973044_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1551.0
DYD3_k127_5973044_1 - - - - 0.0 1412.0
DYD3_k127_5973044_2 Involved in the biosynthesis of porphyrin-containing compound - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 386.0
DYD3_k127_5973044_3 Response regulator of the LytR AlgR family K02477 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005553 374.0
DYD3_k127_5973044_4 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002438 346.0
DYD3_k127_5973044_5 - - - - 0.00000000000000000000000000000000000000001514 156.0
DYD3_k127_5973044_6 WG containing repeat - - - 0.0000000000000003017 88.0
DYD3_k127_5973837_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004488 282.0
DYD3_k127_5973837_1 Calcineurin-like phosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000001003 237.0
DYD3_k127_5973837_4 Sulfatase - - - 0.000000000000000004816 87.0
DYD3_k127_597632_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 0.0 1306.0
DYD3_k127_597632_1 FtsX-like permease family - - - 0.0 1095.0
DYD3_k127_597632_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005129 340.0
DYD3_k127_597632_3 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000488 310.0
DYD3_k127_597632_4 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.00000000000000000000000000000000000000000000000000000118 198.0
DYD3_k127_597632_5 YbbR-like protein - - - 0.0000000000000000000000000000000000000000000004541 178.0
DYD3_k127_597632_6 TIGRFAM preprotein translocase, YajC subunit K03210 - - 0.0000000000000000000000001099 108.0
DYD3_k127_597632_7 Putative auto-transporter adhesin, head GIN domain - - - 0.00000000001211 73.0
DYD3_k127_5978824_0 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K16363 - 3.5.1.108,4.2.1.59 2.853e-254 789.0
DYD3_k127_5978824_1 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 433.0
DYD3_k127_5978824_2 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 385.0
DYD3_k127_5978824_3 ABC transporter K02193 - 3.6.3.41 0.0000000000000000000000002473 107.0
DYD3_k127_5980557_0 Amidohydrolase family - - - 0.0 1593.0
DYD3_k127_5980557_1 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 9.309e-227 707.0
DYD3_k127_5980557_10 Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008654 304.0
DYD3_k127_5980557_11 Domain of unknown function (DU1801) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001439 254.0
DYD3_k127_5980557_12 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000805 223.0
DYD3_k127_5980557_13 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000003795 212.0
DYD3_k127_5980557_14 Ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000003986 198.0
DYD3_k127_5980557_15 Binds to the 23S rRNA K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000000000000000005557 193.0
DYD3_k127_5980557_16 transcriptional - - - 0.000000000000000000000000000000000000246 145.0
DYD3_k127_5980557_17 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877 - 0.0000000000000000000000000000000003292 131.0
DYD3_k127_5980557_18 Septum formation initiator - - - 0.000000000000000000000000000001235 123.0
DYD3_k127_5980557_19 long-chain fatty acid transport protein - - - 0.00000000000000003132 88.0
DYD3_k127_5980557_2 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 2.317e-217 680.0
DYD3_k127_5980557_20 Ribosomal protein L30 K02907 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000003237 82.0
DYD3_k127_5980557_21 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.00000000000001089 73.0
DYD3_k127_5980557_3 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009368 578.0
DYD3_k127_5980557_4 Belongs to the CarA family K01956 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 547.0
DYD3_k127_5980557_5 Belongs to the LDH2 MDH2 oxidoreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 543.0
DYD3_k127_5980557_6 N-terminal domain of unknown function (DUF4140) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000552 479.0
DYD3_k127_5980557_7 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005119 379.0
DYD3_k127_5980557_8 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004795 314.0
DYD3_k127_5980557_9 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 302.0
DYD3_k127_5981529_0 Involved in the tonB-independent uptake of proteins - - - 0.0 1131.0
DYD3_k127_5981529_1 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00346 - 1.6.5.8 4.558e-198 627.0
DYD3_k127_5981529_10 PFAM FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001375 284.0
DYD3_k127_5981529_11 - - - - 0.000000000000000000000000000000000000000000000000000000009683 205.0
DYD3_k127_5981529_12 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.00000000000000000000000000000000000000000000000000000001052 202.0
DYD3_k127_5981529_13 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00348 - 1.6.5.8 0.0000000000000000000000000000000000000000000000000000004213 201.0
DYD3_k127_5981529_14 Protein of unknown function (DUF502) - - - 0.0000000000000000000000000000000000000000000000001068 183.0
DYD3_k127_5981529_16 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.00000000000000000173 85.0
DYD3_k127_5981529_17 Chaperone of endosialidase - - - 0.00000000003858 78.0
DYD3_k127_5981529_18 cell wall surface anchor family protein K13735 - - 0.00000008489 67.0
DYD3_k127_5981529_2 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000049 573.0
DYD3_k127_5981529_20 Hep Hag repeat protein - - - 0.0001866 56.0
DYD3_k127_5981529_3 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00347 - 1.6.5.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000631 556.0
DYD3_k127_5981529_4 FMN-dependent dehydrogenase K00101,K00467 - 1.1.2.3,1.13.12.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 512.0
DYD3_k127_5981529_5 Converts alpha-aldose to the beta-anomer K01785 - 5.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001336 397.0
DYD3_k127_5981529_6 Protein of unknown function (DUF3500) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006469 377.0
DYD3_k127_5981529_7 Redoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003539 365.0
DYD3_k127_5981529_8 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00349 - 1.6.5.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002686 296.0
DYD3_k127_5981529_9 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00350 - 1.6.5.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004786 288.0
DYD3_k127_5984512_0 PFAM Major Facilitator Superfamily K02429 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004656 577.0
DYD3_k127_5984512_1 Short-chain dehydrogenase reductase sdr K00059,K18333 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003372 407.0
DYD3_k127_5984512_2 PFAM amidohydrolase K07046 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000819 334.0
DYD3_k127_5984512_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000003284 241.0
DYD3_k127_5984512_4 L-rhamnose mutarotase K03534 - 5.1.3.32 0.00000000000000000000000000000000000000000008076 165.0
DYD3_k127_5984609_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 2.112e-303 940.0
DYD3_k127_5984609_1 Bacterial Ig-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009276 299.0
DYD3_k127_5984609_2 Methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001284 278.0
DYD3_k127_5984609_3 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K04757 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000008844 204.0
DYD3_k127_5984609_4 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA - - - 0.000000000000000000000000000000000004593 141.0
DYD3_k127_5988315_0 Tetratricopeptide repeat - - - 2.638e-241 764.0
DYD3_k127_5988315_1 Acyltransferase family K11941 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008861 516.0
DYD3_k127_5988315_2 FtsX-like permease family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002165 452.0
DYD3_k127_5988315_3 Ankyrin repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000005145 228.0
DYD3_k127_5988315_4 Belongs to the thioredoxin family K03671 - - 0.000000000000000000000000000000000000000000000000004757 183.0
DYD3_k127_5988315_5 Dienelactone hydrolase family - - - 0.00000000000000000000000002175 118.0
DYD3_k127_5990947_0 Pyrrolo-quinoline quinone K00117 - 1.1.5.2 4.563e-260 818.0
DYD3_k127_5990947_1 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004198 503.0
DYD3_k127_5990947_2 - - - - 0.00000000000000000000000000000000000000000000000002303 185.0
DYD3_k127_5990947_3 - - - - 0.0000000000000000000000000000000000000004288 156.0
DYD3_k127_5990947_4 superoxide dismutase activity - - - 0.000000000000000000000000000000009167 134.0
DYD3_k127_5990947_5 - - - - 0.0000000000000000000000009487 110.0
DYD3_k127_5990947_6 domain, Protein K08961 - 4.2.2.20,4.2.2.21 0.0000000000000000002252 95.0
DYD3_k127_5990947_7 DNA alkylation repair enzyme - - - 0.000001078 59.0
DYD3_k127_5990947_8 CAAX protease self-immunity K07052 - - 0.00004313 48.0
DYD3_k127_5999523_0 PFAM sulfatase - - - 3.632e-228 715.0
DYD3_k127_5999523_1 Protein of unknown function (DUF3500) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 515.0
DYD3_k127_5999523_10 Domain of unknown function (DUF1905) - - - 0.00000000000000000000000000000000104 132.0
DYD3_k127_5999523_11 - - - - 0.0000000000000000002404 93.0
DYD3_k127_5999523_12 chlorophyll binding K03286 - - 0.0000000000000044 82.0
DYD3_k127_5999523_13 Predicted membrane protein (DUF2231) - - - 0.00000000000007426 77.0
DYD3_k127_5999523_2 PFAM Heparinase II III-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002486 509.0
DYD3_k127_5999523_3 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008702 482.0
DYD3_k127_5999523_4 photosynthesis K20543 - - 0.000000000000000000000000000000000000000000000000001044 198.0
DYD3_k127_5999523_5 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000004095 166.0
DYD3_k127_5999523_6 acetylesterase activity - - - 0.00000000000000000000000000000000000000001121 159.0
DYD3_k127_5999523_7 - - - - 0.0000000000000000000000000000000000000001626 152.0
DYD3_k127_5999523_8 Cytochrome P450 - - - 0.00000000000000000000000000000000002089 151.0
DYD3_k127_5999523_9 - - - - 0.00000000000000000000000000000000008183 139.0
DYD3_k127_601003_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696,K01817 - 4.2.1.20,5.3.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004313 548.0
DYD3_k127_601003_1 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005017 327.0
DYD3_k127_601003_2 PFAM DAHP synthetase I family K03856 - 2.5.1.54 0.00000000000000000001024 93.0
DYD3_k127_6039059_0 - Catabolite gene activator and regulatory subunit of cAMP-dependent protein - - - 1.405e-300 954.0
DYD3_k127_6039059_1 WD40 repeats - - - 9.984e-263 814.0
DYD3_k127_6039059_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009716 531.0
DYD3_k127_6039059_3 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 410.0
DYD3_k127_6039059_4 PFAM Mandelate racemase muconate lactonizing enzyme, C-terminal domain - - - 0.00000000000234 69.0
DYD3_k127_604229_0 COG2801 Transposase and inactivated derivatives - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007198 514.0
DYD3_k127_604229_1 von Willebrand factor (vWF) type A domain - - - 0.000006088 55.0
DYD3_k127_604229_2 Zinc metalloprotease (Elastase) - - - 0.00001059 56.0
DYD3_k127_6046845_0 Sigma factor PP2C-like phosphatases - - - 0.0 1321.0
DYD3_k127_6046845_1 PFAM MCP methyltransferase CheR-type K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001769 435.0
DYD3_k127_6046845_2 CheB methylesterase K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002628 306.0
DYD3_k127_6046845_3 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001263 275.0
DYD3_k127_6046845_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000008833 231.0
DYD3_k127_6046845_5 GAF domain - - - 0.000000000000000000000000000581 123.0
DYD3_k127_604718_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002278 581.0
DYD3_k127_604718_1 PFAM Uncharacterised conserved protein UCP016719 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002235 553.0
DYD3_k127_604718_2 Methyltransferase domain - - - 0.000000000000000000000000000000000000000001161 161.0
DYD3_k127_604718_3 protein kinase activity - - - 0.000000000000000000000582 102.0
DYD3_k127_6049751_0 Universal stress protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003107 305.0
DYD3_k127_6049751_1 transcription regulator containing HTH domain K18831 - - 0.0000000000000000000000000000000000000000000000000000000001987 204.0
DYD3_k127_6049751_2 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system K19166 - - 0.00000000000000000000000000000000000000000003073 162.0
DYD3_k127_6049751_3 SnoaL-like domain - - - 0.0000000000000000000000000000000000000001644 154.0
DYD3_k127_6049751_4 to Saccharomyces cerevisiae HLJ1 (YMR161W) K09518 GO:0001671,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006457,GO:0006508,GO:0006511,GO:0006807,GO:0006950,GO:0008047,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010033,GO:0010243,GO:0010498,GO:0012505,GO:0016020,GO:0019538,GO:0019941,GO:0030163,GO:0030234,GO:0030433,GO:0030544,GO:0031072,GO:0031984,GO:0032781,GO:0033554,GO:0034975,GO:0034976,GO:0036503,GO:0042175,GO:0042221,GO:0043085,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043462,GO:0043632,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0050790,GO:0050896,GO:0051336,GO:0051345,GO:0051603,GO:0051716,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0071704,GO:0098772,GO:0098827,GO:1901564,GO:1901565,GO:1901575,GO:1901698 - 0.0000000000000001821 89.0
DYD3_k127_6063306_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 1.42e-285 886.0
DYD3_k127_6063306_1 Peptidase, M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000349 466.0
DYD3_k127_6063306_2 Bacterial regulatory helix-turn-helix protein, lysR family K02019 - - 0.0000000000000000003577 91.0
DYD3_k127_6063306_3 Protein of unknown function (DUF2490) - - - 0.00000002055 60.0
DYD3_k127_6073054_0 4Fe-4S dicluster domain K00184 - - 0.0 1137.0
DYD3_k127_6073054_1 PFAM Polysulphide reductase, NrfD K00185 - - 0.0000000003413 61.0
DYD3_k127_6079140_0 Nitrite and sulphite reductase 4Fe-4S K00362 - 1.7.1.15 0.0 1202.0
DYD3_k127_6079140_1 TIGRFAM nitrite reductase NAD(P)H , small subunit K00363 - 1.7.1.15 0.000000000000000000000000000000000000000000000000000001353 194.0
DYD3_k127_6079140_2 Domain of unknown function (DUF4202) - - - 0.0000000000000000000000000000000000000000000000000001409 191.0
DYD3_k127_6079140_3 Histidine kinase - - - 0.000000000000000000000002258 109.0
DYD3_k127_6079140_4 ATPase family associated with various cellular activities (AAA) - - - 0.00000000000000003176 85.0
DYD3_k127_6079140_5 Alginate export - - - 0.0001318 46.0
DYD3_k127_6081681_0 Amino acid permease - - - 1.156e-219 692.0
DYD3_k127_6081681_1 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455,K03499 - - 0.00000000000000000000000000000000000000000008147 172.0
DYD3_k127_6084771_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.0 1169.0
DYD3_k127_6084771_1 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 0.0 1124.0
DYD3_k127_6084771_2 PFAM PSP1 C-terminal conserved region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007346 550.0
DYD3_k127_6084771_3 Belongs to the GARS family K01945 - 6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003139 513.0
DYD3_k127_6084771_4 uridine kinase K00876 - 2.7.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000004885 243.0
DYD3_k127_6084771_5 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000458 238.0
DYD3_k127_6084771_6 TIGRFAM Gliding motility-associated lipoprotein, GldH - GO:0006022,GO:0006026,GO:0006030,GO:0006032,GO:0006040,GO:0006807,GO:0006928,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0017144,GO:0040011,GO:0042737,GO:0043170,GO:0044237,GO:0044248,GO:0046348,GO:0048870,GO:0051179,GO:0051674,GO:0071704,GO:0071976,GO:1901071,GO:1901072,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 - 0.000000000000000000989 92.0
DYD3_k127_6084771_7 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.0000000000001476 73.0
DYD3_k127_6125653_0 Sucrose synthase K00696 - 2.4.1.14 0.0 1106.0
DYD3_k127_6125653_1 PFAM Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 8.792e-208 660.0
DYD3_k127_6125653_2 Glycosyl hydrolases family 32 N-terminal domain K01193 - 3.2.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 505.0
DYD3_k127_6125653_3 fatty acid desaturase K00508 - 1.14.19.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005365 441.0
DYD3_k127_6125653_4 Releases the N-terminal proline from various substrates K01259 - 3.4.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005097 349.0
DYD3_k127_6125653_5 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000038 231.0
DYD3_k127_6125653_6 - - - - 0.00000000000000000000000000000008649 132.0
DYD3_k127_6125653_7 Hemopexin - - - 0.000000002364 64.0
DYD3_k127_6136289_0 Fumarate reductase flavoprotein C-term K00239 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 435.0
DYD3_k127_6136289_1 2Fe-2S iron-sulfur cluster binding domain K00240 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 405.0
DYD3_k127_6136289_2 - - - - 0.00000000000000000000000000000004753 132.0
DYD3_k127_6136289_4 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0002378 45.0
DYD3_k127_6140902_0 Transglutaminase-like superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008757 322.0
DYD3_k127_6186218_0 Putative esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005419 389.0
DYD3_k127_6186218_1 Male sterility protein K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000001817 161.0
DYD3_k127_6186218_2 - - - - 0.0006629 48.0
DYD3_k127_6200468_0 Poly A polymerase head domain K00970,K00974 - 2.7.7.19,2.7.7.72 4.758e-210 661.0
DYD3_k127_6200468_1 PFAM ABC transporter K09812 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001474 346.0
DYD3_k127_6200468_2 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616,K08314 - 2.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007466 282.0
DYD3_k127_6200468_3 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000003213 199.0
DYD3_k127_6200468_4 PFAM YicC-like family, N-terminal region - - - 0.00000000000000000000000973 105.0
DYD3_k127_6229124_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 1.154e-235 733.0
DYD3_k127_6229124_1 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.00000000000000000000000000000000000000000004432 162.0
DYD3_k127_6229783_0 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 - 4.1.1.32 0.0 1016.0
DYD3_k127_6229783_1 Glucose / Sorbosone dehydrogenase K08738 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009887 611.0
DYD3_k127_6229783_2 Cytochrome c, class I K08738,K09992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009037 517.0
DYD3_k127_6229783_3 PFAM TonB-dependent Receptor Plug - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004807 502.0
DYD3_k127_6229783_4 Asparaginase K01444,K13051 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.19.5,3.5.1.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000632 427.0
DYD3_k127_6229783_5 Xylose isomerase domain protein TIM barrel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006398 252.0
DYD3_k127_6229783_6 Participates in the control of copper homeostasis K06201 - - 0.000000000000000000000000000000000000000000000000000000000000000007999 232.0
DYD3_k127_6229783_7 Cytochrome c K08738 - - 0.00000000000000000000000000002003 121.0
DYD3_k127_6229783_8 Universal stress protein - - - 0.00000000000000003424 92.0
DYD3_k127_6237741_0 Large extracellular alpha-helical protein - - - 6.425e-210 677.0
DYD3_k127_6237741_1 Pfam Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003992 341.0
DYD3_k127_6237741_2 pfam nipsnap - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004344 291.0
DYD3_k127_6237741_3 Domain of unknown function (DUF4918) - - - 0.000000000000000000000000000000000000000000000000000000000000000004847 231.0
DYD3_k127_6237741_4 Domain of unknown function (DUF4249) - - - 0.000000000000000000000000000000001477 138.0
DYD3_k127_6238941_0 Protein of unknown function (DUF1549) - - - 1.267e-279 869.0
DYD3_k127_6238941_1 Protein of unknown function (DUF1501) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008389 381.0
DYD3_k127_6238941_2 Protein of unknown function (DUF1549) - - - 0.0000000000000000000000000000000000000000000000001347 181.0
DYD3_k127_627716_0 PFAM M42 glutamyl aminopeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 418.0
DYD3_k127_627716_1 Glycosyl hydrolases family 16 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002713 408.0
DYD3_k127_627716_2 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008523 349.0
DYD3_k127_627716_3 uracil phosphoribosyltransferase K00761 - 2.4.2.9 0.00000000000000000000000000000000000000000000000000000000000000001996 231.0
DYD3_k127_627716_4 - - - - 0.0000000000000002008 85.0
DYD3_k127_6277802_0 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775,K01929 - 5.1.1.1,6.3.2.10 5.283e-262 830.0
DYD3_k127_6277802_1 Glycosyl hydrolase family 20, catalytic domain K12373 - 3.2.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001411 591.0
DYD3_k127_6277802_2 Domain of Unknown Function (DUF1080) - - - 0.00000000000000000000000000000000000000000000000000000000000000000004817 240.0
DYD3_k127_6277802_3 GTP cyclohydrolase K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000004342 219.0
DYD3_k127_6277802_4 TonB dependent receptor K16087 - - 0.00000000000000000000000000000000000000000000000000000000000006096 220.0
DYD3_k127_6277802_5 PFAM Stage II sporulation protein E (SpoIIE) - - - 0.00000000000000004441 83.0
DYD3_k127_6277802_6 translation initiation factor activity K12573 - - 0.00000000003037 68.0
DYD3_k127_6281621_0 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 441.0
DYD3_k127_6281621_1 - - - - 0.0000000000000000000000000000000000000000000000001201 182.0
DYD3_k127_6281621_2 Cytochrome c - - - 0.00000000000000000000001911 102.0
DYD3_k127_6281621_3 Cytochrome c - - - 0.00009733 46.0
DYD3_k127_6283771_0 Sortilin, neurotensin receptor 3, - - - 0.0 1242.0
DYD3_k127_6283771_1 Protein of unknown function (DUF1549) - - - 0.000000000000000000000000000000000005328 139.0
DYD3_k127_6286304_0 MoeA N-terminal region (domain I and II) K03750 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 403.0
DYD3_k127_6286304_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 390.0
DYD3_k127_6286304_2 peptidase inhibitor activity - - - 0.00000000000000000000000000000000000000000000000000000003233 201.0
DYD3_k127_6286304_3 MoaC family K03637 - 4.6.1.17 0.0000000000000000000000000000000000000000000000000001299 190.0
DYD3_k127_6286304_4 methyltransferase - - - 0.000000000000000000000000000000000000000000001458 174.0
DYD3_k127_6286304_5 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.00000000000000000000000006793 114.0
DYD3_k127_6286304_6 Belongs to the glycerate kinase type-1 family K00865 - 2.7.1.165 0.00000000000000001037 85.0
DYD3_k127_6301168_0 translation initiation factor activity K02453 - - 0.0000000000000000000000000000000000000000000004279 192.0
DYD3_k127_6301168_1 7TM diverse intracellular signalling - - - 0.00000000000000000000003593 115.0
DYD3_k127_6301168_2 PFAM Pentapeptide repeats (8 copies) - - - 0.000000000000000001019 102.0
DYD3_k127_6301168_3 ribosomal subunit interface protein - - - 0.00000000318 58.0
DYD3_k127_6301168_4 - - - - 0.00000001825 62.0
DYD3_k127_6301168_5 DNA-templated transcription, initiation - - - 0.000001826 61.0
DYD3_k127_6301168_6 Histidine kinase - - - 0.0000906 49.0
DYD3_k127_6302296_0 Amidohydrolase family - - - 0.0 1507.0
DYD3_k127_6302296_1 Molecular chaperone. Has ATPase activity K04079 - - 4.6e-321 991.0
DYD3_k127_6302296_10 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000004919 64.0
DYD3_k127_6302296_2 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000468 453.0
DYD3_k127_6302296_3 aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004712 332.0
DYD3_k127_6302296_4 Bacterial phospho-glucose isomerase C-terminal SIS domain K15916 - 5.3.1.8,5.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006058 318.0
DYD3_k127_6302296_5 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0016740,GO:0016746,GO:0016747,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0033819,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.181 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000491 311.0
DYD3_k127_6302296_6 repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008683 301.0
DYD3_k127_6302296_7 Predicted membrane protein (DUF2157) - - - 0.000000000000000000000000000000000000000000000006808 184.0
DYD3_k127_6302296_8 Belongs to the UPF0102 family K07460 - - 0.0000000000000000000000000000001573 126.0
DYD3_k127_6302296_9 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000002685 87.0
DYD3_k127_6307418_0 COGs COG0488 ATPase components of ABC transporter with duplicated ATPase domains K06158 - - 7.151e-227 708.0
DYD3_k127_6307418_1 Family of unknown function (DUF1028) K01771 - 4.6.1.13 0.00000000000000000000000000000000000000000000000000002059 206.0
DYD3_k127_6307418_2 DinB family - - - 0.0000000000000000000000000000001179 130.0
DYD3_k127_6307418_3 - - - - 0.0000000000000000000000106 113.0
DYD3_k127_6307418_4 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000000000000000008409 93.0
DYD3_k127_6315057_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 2.911e-194 613.0
DYD3_k127_6315057_1 PFAM Peptidase family M23 - - - 0.00000000000000000000000000000000000000000000000000000001051 207.0
DYD3_k127_6315057_2 peptidase M23 - - - 0.0000000000000000000000000000000000000000000000000000001234 206.0
DYD3_k127_6328163_0 FtsX-like permease family - - - 4.896e-252 799.0
DYD3_k127_6328163_1 M61 glycyl aminopeptidase - - - 4.946e-216 688.0
DYD3_k127_6328163_2 FtsX-like permease family K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001547 519.0
DYD3_k127_6328163_3 Response regulator of the LytR AlgR family K02477 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006128 357.0
DYD3_k127_6328163_4 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007932 358.0
DYD3_k127_6328163_5 Protein of unknown function (DUF2911) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002056 323.0
DYD3_k127_6328163_6 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001223 259.0
DYD3_k127_6328163_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000001718 234.0
DYD3_k127_6342857_0 Belongs to the glycosyl hydrolase 31 family K01187 - 3.2.1.20 1.341e-313 979.0
DYD3_k127_6342857_1 PFAM Periplasmic binding protein LacI transcriptional regulator K02529,K05499 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 409.0
DYD3_k127_6342857_2 Major Facilitator K16211 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000381 243.0
DYD3_k127_6342857_3 TonB dependent receptor - - - 0.00000000000006836 74.0
DYD3_k127_6346315_0 Belongs to the complex I 30 kDa subunit family K13378 - 1.6.5.3 9.102e-317 977.0
DYD3_k127_6346315_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001926 575.0
DYD3_k127_6346315_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000004115 226.0
DYD3_k127_6346315_3 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000001371 202.0
DYD3_k127_6353713_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 1.339e-212 668.0
DYD3_k127_6353713_1 acyl-CoA dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003132 602.0
DYD3_k127_6353713_2 dehydratase K01710 - 4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002469 436.0
DYD3_k127_6353713_3 Belongs to the 'phage' integrase family K03733 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001422 359.0
DYD3_k127_6353713_4 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.00000000000000000000006518 98.0
DYD3_k127_6353713_5 PFAM Sigma 54 modulation protein S30EA ribosomal protein K05808 - - 0.00000000001744 64.0
DYD3_k127_6359030_0 CarboxypepD_reg-like domain - - - 0.0 1026.0
DYD3_k127_6359030_1 Transferrin receptor-like dimerisation domain K01301 - 3.4.17.21 4.813e-314 979.0
DYD3_k127_6359030_10 Low molecular weight phosphotyrosine protein phosphatase K03741 - 1.20.4.1 0.00000000000000000000000000000000000000000000000000000000000006708 215.0
DYD3_k127_6359030_11 Catalyzes the 2'-O methylation of guanosine at position 18 in tRNA K00556 - 2.1.1.34 0.000000000000000000000000000000000000000000000000000000000004841 216.0
DYD3_k127_6359030_12 - - - - 0.0000000000000000000000000000000000000000000000000005633 190.0
DYD3_k127_6359030_13 long-chain fatty acid transport protein - - - 0.000000000000000000000000000000000000000000000002487 179.0
DYD3_k127_6359030_14 - - - - 0.00000000000000000000000000000000000000002723 160.0
DYD3_k127_6359030_15 PFAM Bacterial regulatory protein, arsR family - - - 0.0000000000000000000000000000000000001032 143.0
DYD3_k127_6359030_16 YjbR - - - 0.00000000000000000000000000000006662 128.0
DYD3_k127_6359030_17 Acetyltransferase (GNAT) domain K00619 - 2.3.1.1 0.00000000000000000000000004121 113.0
DYD3_k127_6359030_2 OPT oligopeptide transporter protein - - - 6.515e-304 944.0
DYD3_k127_6359030_3 symporter activity K03307,K11928 - - 4.305e-219 689.0
DYD3_k127_6359030_4 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001405 612.0
DYD3_k127_6359030_5 alpha/beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005453 392.0
DYD3_k127_6359030_6 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007598 394.0
DYD3_k127_6359030_7 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 355.0
DYD3_k127_6359030_8 Hypothetical methyltransferase K07755 - 2.1.1.137 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003581 342.0
DYD3_k127_6359030_9 DUF218 domain K03748 - - 0.0000000000000000000000000000000000000000000000000000000000000000003909 235.0
DYD3_k127_6362379_0 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002845 543.0
DYD3_k127_6362379_1 NIF3 (NGG1p interacting factor 3) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000453 361.0
DYD3_k127_6362379_10 SnoaL-like domain - - - 0.000000000000000000000000000000000000000000004854 169.0
DYD3_k127_6362379_11 RibD C-terminal domain K00287 - 1.5.1.3 0.000000000000000000000000000000000000000000103 166.0
DYD3_k127_6362379_12 Transcriptional regulator - - - 0.000000000000000000000000000000000000001138 153.0
DYD3_k127_6362379_13 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000001676 153.0
DYD3_k127_6362379_14 DoxX-like family - - - 0.00000000000000000000000000000005926 129.0
DYD3_k127_6362379_15 part of a sulfur-relay system K11179,K17218 - 1.8.5.4 0.00000000000000000000000003259 111.0
DYD3_k127_6362379_16 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000006699 106.0
DYD3_k127_6362379_17 Transcriptional regulator - - - 0.000000000000000000000001041 109.0
DYD3_k127_6362379_18 DinB superfamily - - - 0.00000000000000000000002668 106.0
DYD3_k127_6362379_19 - - - - 0.000000000004557 69.0
DYD3_k127_6362379_2 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 297.0
DYD3_k127_6362379_20 - - - - 0.000000001457 65.0
DYD3_k127_6362379_21 Cyclic nucleotide-binding domain - - - 0.0000001391 55.0
DYD3_k127_6362379_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000197 279.0
DYD3_k127_6362379_4 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008582 273.0
DYD3_k127_6362379_5 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000024 241.0
DYD3_k127_6362379_6 sequence-specific DNA binding K01174,K07720,K10778,K13529,K15051 - 2.1.1.63,3.1.31.1,3.2.2.21 0.0000000000000000000000000000000000000000000000000000000000000000001848 239.0
DYD3_k127_6362379_7 Belongs to the UPF0312 family - - - 0.00000000000000000000000000000000000000000000000000000000000000005852 228.0
DYD3_k127_6362379_8 DsrE/DsrF/DrsH-like family - - - 0.000000000000000000000000000000000000000000000000000000000002298 213.0
DYD3_k127_6362379_9 Cyclic nucleotide-binding domain - - - 0.00000000000000000000000000000000000000000000000002105 186.0
DYD3_k127_6363361_0 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009597 404.0
DYD3_k127_6363361_1 PFAM Sigma 54 modulation protein S30EA ribosomal protein K05808 - - 0.000000000000000000000000000000000000000000000004069 173.0
DYD3_k127_6363361_2 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.000000000000000000000000000002957 119.0
DYD3_k127_6363361_5 - - - - 0.0006911 42.0
DYD3_k127_6368587_0 ASPIC and UnbV - - - 8.121e-311 977.0
DYD3_k127_6368587_1 Belongs to the glycosyl hydrolase 13 family - - - 8.579e-283 897.0
DYD3_k127_6368587_2 Alpha amylase, catalytic domain K01176,K01208,K21575 GO:0000272,GO:0000287,GO:0001871,GO:0003674,GO:0003824,GO:0004553,GO:0004556,GO:0005488,GO:0005509,GO:0005575,GO:0005975,GO:0005976,GO:0005982,GO:0005983,GO:0006073,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009251,GO:0009987,GO:0016020,GO:0016052,GO:0016160,GO:0016787,GO:0016798,GO:0019867,GO:0030246,GO:0030247,GO:0043167,GO:0043169,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044260,GO:0044262,GO:0044264,GO:0044275,GO:0046872,GO:0071704,GO:1901575,GO:2001070 3.2.1.1,3.2.1.133,3.2.1.135,3.2.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000897 625.0
DYD3_k127_6368587_3 Protein tyrosine kinase K08838,K12132 - 2.7.11.1 0.000000000003325 68.0
DYD3_k127_6375404_0 FtsX-like permease family - - - 8.948e-241 767.0
DYD3_k127_6375404_1 Ammonium Transporter K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005509 246.0
DYD3_k127_6375404_2 Domain of unknown function (DUF296) K06934 - - 0.00000000000000000000000000000000000000203 151.0
DYD3_k127_6375404_3 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000006298 140.0
DYD3_k127_6383613_0 TIGRFAM exonuclease, DNA polymerase III, epsilon subunit family K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003781 528.0
DYD3_k127_6383613_1 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002605 250.0
DYD3_k127_6383613_2 Damage-inducible protein DinB - - - 0.000000000000000000000000001072 118.0
DYD3_k127_6383613_3 - - - - 0.000000000000000001972 93.0
DYD3_k127_6383613_4 Domain of unknown function (DU1801) - - - 0.0000000000002788 75.0
DYD3_k127_6383613_5 - - - - 0.0000002827 57.0
DYD3_k127_6385359_0 Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate K00366,K00381 - 1.7.7.1,1.8.1.2 4.858e-244 764.0
DYD3_k127_6385359_1 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 3.675e-195 616.0
DYD3_k127_6385359_10 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.00000000000000000000000000000000000000000000004301 188.0
DYD3_k127_6385359_11 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.0000000000000000000000000000000002359 134.0
DYD3_k127_6385359_2 Flavodoxin K00380 - 1.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002226 584.0
DYD3_k127_6385359_3 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951,K01139 - 2.7.6.5,3.1.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003045 421.0
DYD3_k127_6385359_4 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002096 399.0
DYD3_k127_6385359_5 5-aminolevulinic acid synthase K00643 - 2.3.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000223 354.0
DYD3_k127_6385359_6 Belongs to the ALAD family K01698 - 4.2.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000002307 259.0
DYD3_k127_6385359_7 Belongs to the precorrin methyltransferase family K02302,K02303,K13542 - 1.3.1.76,2.1.1.107,4.2.1.75,4.99.1.4 0.00000000000000000000000000000000000000000000000000000000000000000057 237.0
DYD3_k127_6385359_8 Belongs to the Fur family K03711 - - 0.00000000000000000000000000000000000000000000000000000000000000006841 224.0
DYD3_k127_6385359_9 Sirohaem biosynthesis protein central K02304,K07090 - 1.3.1.76,4.99.1.4 0.0000000000000000000000000000000000000000000000000000000000004056 216.0
DYD3_k127_6385676_0 TonB dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 590.0
DYD3_k127_6385676_1 Multi-sensor signal transduction histidine kinase K13924 - 2.1.1.80,3.1.1.61 0.00000000000000000000000000000000000000000000000000000000101 219.0
DYD3_k127_6385676_2 PhoQ Sensor - - - 0.0000000000000000000000000000000000003731 145.0
DYD3_k127_6385676_3 Hep Hag repeat protein - - - 0.000000000000000000001974 109.0
DYD3_k127_6385676_4 amine dehydrogenase activity - - - 0.00000000000000085 89.0
DYD3_k127_6385676_5 Protein conserved in bacteria - - - 0.00000002787 65.0
DYD3_k127_6393876_0 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004028 572.0
DYD3_k127_6393876_1 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002335 533.0
DYD3_k127_6393876_2 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 304.0
DYD3_k127_6393876_3 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005931 275.0
DYD3_k127_6393876_4 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.000000000000000000000000000000000000000000000000000000002615 203.0
DYD3_k127_6393876_5 Protein of unknown function (DUF721) - - - 0.00000000000000000000000000003367 119.0
DYD3_k127_6393876_6 PIN domain - - - 0.000000000000000000000000002958 116.0
DYD3_k127_6393876_7 - - - - 0.00000000000000001196 85.0
DYD3_k127_6393876_8 - - - - 0.00000000002358 67.0
DYD3_k127_6414796_0 phytoene K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009145 467.0
DYD3_k127_6414796_1 D-alanine [D-alanyl carrier protein] ligase activity - - - 0.0000000000000000000000006731 116.0
DYD3_k127_6437475_0 TonB-dependent Receptor Plug - - - 4.048e-281 890.0
DYD3_k127_6437475_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 344.0
DYD3_k127_6437475_2 NADP oxidoreductase coenzyme F420-dependent - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003263 301.0
DYD3_k127_6437475_3 lipoprotein biosynthetic process K13292 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001511 291.0
DYD3_k127_6437475_4 PFAM Scaffold protein Nfu NifU N terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000535 256.0
DYD3_k127_6437475_5 Domain of Unknown Function (DUF1080) - - - 0.000000000000000000000000000000000000000000000000000000000001019 214.0
DYD3_k127_6437475_6 LytTr DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000133 204.0
DYD3_k127_6437475_7 - - - - 0.0000000000000000000000002748 109.0
DYD3_k127_6440029_0 Calcineurin-like phosphoesterase superfamily domain K07313 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007584 293.0
DYD3_k127_6440029_1 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000003022 227.0
DYD3_k127_6440029_2 - - - - 0.00000000000000000000000000000000000000000000000000000004125 203.0
DYD3_k127_6440029_3 sequence-specific DNA binding - - - 0.0000000000000000000004898 103.0
DYD3_k127_6440029_4 Helix-turn-helix XRE-family like proteins - - - 0.000000000003871 68.0
DYD3_k127_6463751_0 LAO AO transport system ATPase K07588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004096 324.0
DYD3_k127_6463751_1 CHASE2 domain - - - 0.00000000000000000000000000000000257 137.0
DYD3_k127_6463751_2 - - - - 0.0000000000000256 74.0
DYD3_k127_6470740_0 Glycosyl Hydrolase Family 88 K18581 - 3.2.1.180 4.91e-250 776.0
DYD3_k127_6470740_1 Oxidoreductase family, C-terminal alpha/beta domain - - - 2.932e-233 723.0
DYD3_k127_6470740_2 PFAM Major facilitator superfamily MFS-1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002441 505.0
DYD3_k127_6470740_3 Xylose isomerase-like TIM barrel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001615 435.0
DYD3_k127_6470740_4 Belongs to the mannitol dehydrogenase family. UxaB subfamily K00041 - 1.1.1.58 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002771 417.0
DYD3_k127_6470740_5 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002547 385.0
DYD3_k127_6470740_6 PFAM Periplasmic binding protein LacI transcriptional regulator K02529,K05499 - - 0.000000000000000000000000000000000000000113 156.0
DYD3_k127_6528837_0 PIN domain K07175 - - 1.212e-230 719.0
DYD3_k127_6528837_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003151 501.0
DYD3_k127_6528837_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000006355 244.0
DYD3_k127_6529678_0 Alpha-L-rhamnosidase - - - 2.186e-221 699.0
DYD3_k127_6529678_1 Belongs to the peptidase M24B family K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000205 576.0
DYD3_k127_6529678_2 Domain of unknown function (DUF4249) - - - 0.000000000000006051 78.0
DYD3_k127_6529678_3 Large extracellular alpha-helical protein - - - 0.000000000001256 81.0
DYD3_k127_6529678_4 Arylsulfatase family, member K K12376 GO:0003674,GO:0003824,GO:0004065,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005788,GO:0008484,GO:0012505,GO:0016787,GO:0016788,GO:0031974,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0070013 - 0.0001335 49.0
DYD3_k127_6542065_0 alpha-glucuronidase activity K01235 GO:0000272,GO:0003674,GO:0003824,GO:0004553,GO:0005975,GO:0005976,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010383,GO:0010410,GO:0010413,GO:0016052,GO:0016787,GO:0016798,GO:0033939,GO:0043170,GO:0044036,GO:0044237,GO:0044238,GO:0044260,GO:0045491,GO:0045493,GO:0071554,GO:0071704,GO:1901575,GO:2000886 3.2.1.139 0.0 1019.0
DYD3_k127_6542065_1 deoxynucleoside kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003152 304.0
DYD3_k127_6542065_2 YCII-related domain - - - 0.000000000000000000000000000000000000000000000000000002031 198.0
DYD3_k127_6542065_3 Involved in the tonB-independent uptake of proteins - - - 0.0000000000000000000000000000000000000000000000000003548 194.0
DYD3_k127_6542065_4 - - - - 0.0000000000000000000000000000000000000002417 159.0
DYD3_k127_6542065_6 Putative beta-lactamase-inhibitor-like, PepSY-like - - - 0.000004552 54.0
DYD3_k127_6575014_0 PFAM Peptidase family M20 M25 M40 K01436 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009058 520.0
DYD3_k127_6575014_1 Alanine dehydrogenase PNT, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002556 488.0
DYD3_k127_6575014_2 protein conserved in cyanobacteria - - - 0.00000000000000000000000000000000000000000000000714 175.0
DYD3_k127_6579958_0 ABC-2 type transporter - - - 1.23e-292 916.0
DYD3_k127_6579958_1 Beta-L-arabinofuranosidase, GH127 K09955 - - 6.945e-284 885.0
DYD3_k127_6579958_2 C-terminal domain of CHU protein family - - - 4.09e-196 644.0
DYD3_k127_6602772_0 PFAM Family of - - - 3.175e-226 727.0
DYD3_k127_6602772_1 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 572.0
DYD3_k127_6602772_10 ankyrin repeats - - - 0.000000001077 60.0
DYD3_k127_6602772_11 ankyrin repeats - - - 0.000009229 49.0
DYD3_k127_6602772_12 Belongs to the eIF-2B alpha beta delta subunits family K03239 - - 0.0007058 50.0
DYD3_k127_6602772_2 BNR repeat-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001726 463.0
DYD3_k127_6602772_3 COG0604 NADPH quinone reductase and related Zn-dependent - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002479 389.0
DYD3_k127_6602772_4 Sodium:solute symporter family K03307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 309.0
DYD3_k127_6602772_5 Predicted periplasmic lipoprotein (DUF2279) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006103 299.0
DYD3_k127_6602772_6 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001655 287.0
DYD3_k127_6602772_7 Redoxin K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000008491 221.0
DYD3_k127_6602772_8 - - - - 0.0000000000000000000000000000000000002702 144.0
DYD3_k127_6602772_9 ankyrin repeats - - - 0.00000000000000007992 81.0
DYD3_k127_6614561_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1361.0
DYD3_k127_6614561_1 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit K11381 - 1.2.4.4 0.0 1016.0
DYD3_k127_6614561_11 light absorption K06893 - - 0.000003731 56.0
DYD3_k127_6614561_12 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.00001301 57.0
DYD3_k127_6614561_2 FtsX-like permease family K02004 - - 2.071e-243 775.0
DYD3_k127_6614561_3 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001355 367.0
DYD3_k127_6614561_4 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 304.0
DYD3_k127_6614561_5 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000002145 248.0
DYD3_k127_6614561_6 TIGRFAM YihY family protein (not ribonuclease BN) K07058 - - 0.000000000000000000000000000000000000000000000000000000000000000002406 232.0
DYD3_k127_6614561_7 chlorophyll binding - - - 0.0000000000000000000000000000000000007781 154.0
DYD3_k127_6614561_8 mRNA binding K07339 - - 0.00000000000009751 73.0
DYD3_k127_6614561_9 PFAM Uncharacterised protein family UPF0150 - - - 0.000000000003369 68.0
DYD3_k127_6621397_0 Belongs to the aldehyde dehydrogenase family K00128,K10217 - 1.2.1.3,1.2.1.32,1.2.1.85 6.129e-244 760.0
DYD3_k127_6621397_1 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003146 340.0
DYD3_k127_6621397_2 SpoU rRNA Methylase family K03437 - - 0.00000000000000005285 85.0
DYD3_k127_6626896_0 Saccharopine dehydrogenase K00290,K00293 - 1.5.1.10,1.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002504 477.0
DYD3_k127_6626896_1 COGs COG0659 Sulfate permease and related transporter (MFS superfamily) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 445.0
DYD3_k127_6626896_2 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002374 298.0
DYD3_k127_6626896_3 COG0659 Sulfate permease and related transporters (MFS superfamily) K03321 - - 0.0000000000000000000114 100.0
DYD3_k127_6633055_0 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 286.0
DYD3_k127_6633055_1 COGs COG0545 FKBP-type peptidyl-prolyl cis-trans isomerase 1 K03772 - 5.2.1.8 0.000000000000000000001333 102.0
DYD3_k127_6633055_2 GLEYA domain - - - 0.0000000000000008765 90.0
DYD3_k127_664068_0 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 467.0
DYD3_k127_664068_1 Phosphotriesterase family K07048 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003257 421.0
DYD3_k127_664068_2 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234 2.1.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 297.0
DYD3_k127_664068_3 SusD family K21572 - - 0.000000000000000000000000000000000000000000008872 166.0
DYD3_k127_664068_4 PFAM N-(5'phosphoribosyl)anthranilate (PRA) isomerase K01817 - 5.3.1.24 0.0000000000000000000000002548 112.0
DYD3_k127_664068_5 S53, subtilisin kexin sedolisin - - - 0.00000000000000000000002363 103.0
DYD3_k127_664068_6 - - - - 0.0000000000000000000001849 107.0
DYD3_k127_6646820_0 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001405 370.0
DYD3_k127_6646820_1 PFAM Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004423 325.0
DYD3_k127_6646820_2 Polymer-forming cytoskeletal - - - 0.00000000000000000000000000000000000000000000000002327 183.0
DYD3_k127_6646820_3 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.000000000000000000000000001374 115.0
DYD3_k127_6646820_4 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000000006988 100.0
DYD3_k127_6646820_5 FAD dependent oxidoreductase - - - 0.00000000000000003745 81.0
DYD3_k127_6646820_6 HD domain K21138 GO:0003674,GO:0003824,GO:0006139,GO:0006152,GO:0006163,GO:0006195,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008893,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009150,GO:0009154,GO:0009164,GO:0009166,GO:0009259,GO:0009261,GO:0009605,GO:0009987,GO:0009991,GO:0015969,GO:0015971,GO:0016787,GO:0016788,GO:0016794,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0031667,GO:0033865,GO:0033869,GO:0033875,GO:0034031,GO:0034032,GO:0034034,GO:0034035,GO:0034037,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042278,GO:0042454,GO:0042578,GO:0042594,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0046128,GO:0046130,GO:0046434,GO:0046483,GO:0046700,GO:0050896,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901068,GO:1901069,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658 3.1.7.2 0.0000000002618 61.0
DYD3_k127_6655639_0 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) - - - 0.00000000000000000000000000000001105 128.0
DYD3_k127_6655639_1 C-terminal domain of CHU protein family - - - 0.0000000002745 73.0
DYD3_k127_667153_0 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018 618.0
DYD3_k127_667153_1 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain L K00341 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005585 502.0
DYD3_k127_667153_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008137,GO:0008150,GO:0008152,GO:0009060,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015672,GO:0015980,GO:0015988,GO:0015990,GO:0016020,GO:0016021,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0030964,GO:0031224,GO:0031226,GO:0032991,GO:0034220,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072521,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0098803,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1902600,GO:1990204 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000214 428.0
DYD3_k127_6677796_0 O-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005759 292.0
DYD3_k127_6677796_1 Methylenetetrahydrofolate reductase - - - 0.000000000000000000000000000000000000000000000000000000445 196.0
DYD3_k127_6677796_2 Tetratricopeptide repeat - - - 0.000000000000000001064 99.0
DYD3_k127_6694445_0 Penicillin amidase K01434 - 3.5.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007132 625.0
DYD3_k127_6694887_0 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009413 403.0
DYD3_k127_6694887_1 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000165 329.0
DYD3_k127_6694887_2 PFAM CBS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001713 265.0
DYD3_k127_6694887_3 Belongs to the ompA family - - - 0.000000000000000000000000000000000001802 141.0
DYD3_k127_6694887_4 PFAM Yqey-like protein K09117 - - 0.00000000000000000000000000003174 118.0
DYD3_k127_6694887_5 Colicin V production protein K03558 - - 0.000000000000000000000000008176 116.0
DYD3_k127_6702235_0 TonB dependent receptor K16089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004843 582.0
DYD3_k127_6702235_1 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008037 295.0
DYD3_k127_6702235_2 AraC family transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001763 255.0
DYD3_k127_6702235_3 HmuY protein - - - 0.0000000000000000000000006241 109.0
DYD3_k127_6709715_0 Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid K00486 - 1.14.13.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008256 544.0
DYD3_k127_6709715_1 Bacterial alpha-L-rhamnosidase C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007003 439.0
DYD3_k127_6709715_2 Lumazine binding domain K00793 - 2.5.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000003888 254.0
DYD3_k127_6709715_3 PFAM TonB-dependent Receptor Plug - - - 0.0000000000000001973 80.0
DYD3_k127_6714357_0 type I phosphodiesterase nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001497 548.0
DYD3_k127_6714357_1 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005552 522.0
DYD3_k127_6714357_2 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002037 490.0
DYD3_k127_6714357_3 6-phosphogluconate dehydrogenase, C-terminal domain K00033 - 1.1.1.343,1.1.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 336.0
DYD3_k127_6714357_4 Integrase core domain K07497 - - 0.000000000000000000000000000000005328 129.0
DYD3_k127_6714357_5 23S rRNA-intervening sequence protein - - - 0.0000000000000000000000000002541 118.0
DYD3_k127_6714357_6 WG containing repeat - - - 0.0000000000000000000008668 112.0
DYD3_k127_6714357_8 PFAM KWG Leptospira - - - 0.00005571 57.0
DYD3_k127_6724542_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 2.189e-216 676.0
DYD3_k127_6724542_1 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 2.888e-206 651.0
DYD3_k127_6724542_2 Fibronectin-binding protein A N-terminus (FbpA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007518 383.0
DYD3_k127_6724542_3 of the beta-lactamase superfamily I K06167 - 3.1.4.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009247 360.0
DYD3_k127_6724542_4 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004896 337.0
DYD3_k127_6724542_5 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006761 278.0
DYD3_k127_6724542_6 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.000000000000000000000000000000000000008737 145.0
DYD3_k127_6724542_7 - - - - 0.000000000000000000000000000006098 122.0
DYD3_k127_6724542_8 - - - - 0.0000000000000001644 84.0
DYD3_k127_6739711_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003303 559.0
DYD3_k127_6739711_1 SusD family K21572 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003649 492.0
DYD3_k127_6739711_2 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000168 466.0
DYD3_k127_6739711_3 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002512 332.0
DYD3_k127_6739711_4 ZIP Zinc transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001198 249.0
DYD3_k127_6739711_5 Secretin and TonB N terminus short domain - - - 0.000000000000000000000000000000000000000000000000000000001215 204.0
DYD3_k127_6739711_6 PD-(D/E)XK nuclease superfamily - - - 0.00000000000000000000000000000000005248 136.0
DYD3_k127_6739711_7 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.00000000000000000000000000006053 118.0
DYD3_k127_6742034_0 Beta-lactamase - - - 8.164e-198 627.0
DYD3_k127_6742034_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 520.0
DYD3_k127_6742034_2 PFAM SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001907 463.0
DYD3_k127_6742034_3 PFAM MORN repeat variant - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004496 254.0
DYD3_k127_6742034_4 Belongs to the anti-sigma-factor antagonist family - - - 0.00000000000000000000000000000000000000000000000000000000002141 207.0
DYD3_k127_6742034_5 PFAM peptidase M3A and M3B thimet oligopeptidase F K08602 - - 0.000000418 53.0
DYD3_k127_6752320_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1308.0
DYD3_k127_6752320_1 PFAM glycogen synthase K00693 - 2.4.1.11 3.521e-237 747.0
DYD3_k127_6752320_2 ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001766 408.0
DYD3_k127_6752320_4 PFAM RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) - - - 0.00000294 52.0
DYD3_k127_6770312_0 permease - - - 2.692e-205 655.0
DYD3_k127_6770312_1 PFAM Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002992 512.0
DYD3_k127_6770312_2 RDD family - - - 0.00000000000000000000000000003653 122.0
DYD3_k127_6770312_3 DinB family - - - 0.0000000000000000000000000002204 121.0
DYD3_k127_67798_0 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA K00639 - 2.3.1.29 2.063e-215 673.0
DYD3_k127_67798_1 Belongs to the thiolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003651 608.0
DYD3_k127_67798_10 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 0.0000000000000000000000000000000007627 136.0
DYD3_k127_67798_11 YceI-like domain - - - 0.0000000000000000000000000002309 120.0
DYD3_k127_67798_12 - - - - 0.000000000000008105 75.0
DYD3_k127_67798_13 Kdo2-lipid A biosynthetic process K02517 - 2.3.1.241 0.000000001279 62.0
DYD3_k127_67798_2 NAD dependent epimerase dehydratase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009113 436.0
DYD3_k127_67798_3 DoxX family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004609 430.0
DYD3_k127_67798_4 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000477 346.0
DYD3_k127_67798_5 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001584 340.0
DYD3_k127_67798_6 3-oxoadipate enol-lactonase K01055,K14727 - 3.1.1.24,4.1.1.44 0.00000000000000000000000000000000000000000000000000000000000000000008325 239.0
DYD3_k127_67798_7 Lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.0000000000000000000000000000000000000000000000001181 184.0
DYD3_k127_67798_8 - - - - 0.0000000000000000000000000000000000000000000001457 173.0
DYD3_k127_67798_9 Stress responsive A/B Barrel Domain - - - 0.000000000000000000000000000000000000003207 150.0
DYD3_k127_6784977_0 ASPIC and UnbV - - - 0.0 1116.0
DYD3_k127_6784977_1 ASPIC and UnbV - - - 9.839e-307 974.0
DYD3_k127_6784977_2 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 3.567e-223 701.0
DYD3_k127_6784977_3 Belongs to the xylose isomerase family K01805 - 5.3.1.5 2.177e-220 689.0
DYD3_k127_6784977_4 Oxidoreductase - - - 2.547e-203 638.0
DYD3_k127_6784977_5 AP endonuclease family 2 C terminus - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002184 514.0
DYD3_k127_6784977_6 pyridine nucleotide-disulphide oxidoreductase K21572 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 438.0
DYD3_k127_6784977_7 Tfp pilus assembly protein tip-associated adhesin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004591 374.0
DYD3_k127_6784977_8 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000000000000000008063 117.0
DYD3_k127_6792644_0 glutamine synthetase K01915 - 6.3.1.2 0.0 1088.0
DYD3_k127_6792644_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 1.478e-203 638.0
DYD3_k127_6792644_2 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003743 468.0
DYD3_k127_6792644_3 GDSL-like Lipase/Acylhydrolase family K10804 - 3.1.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006779 282.0
DYD3_k127_6792644_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001411 264.0
DYD3_k127_6792644_5 COG2755 Lysophospholipase L1 and related - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001387 247.0
DYD3_k127_6792644_6 Protein of unknown function (DUF2911) - - - 0.00000000000000000000000000000000000000000000001374 175.0
DYD3_k127_6792644_7 CobQ CobB MinD ParA nucleotide binding domain K03496 - - 0.00000000000000000000000000000000000000002593 161.0
DYD3_k127_6792644_8 - - - - 0.0000000000000000000866 96.0
DYD3_k127_6792644_9 Copper-transporting ATPase RAN1 K17686 GO:0000160,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005794,GO:0005802,GO:0007154,GO:0007165,GO:0008150,GO:0009719,GO:0009723,GO:0009725,GO:0009755,GO:0009873,GO:0009987,GO:0010033,GO:0010119,GO:0012505,GO:0016020,GO:0023052,GO:0031410,GO:0031982,GO:0031984,GO:0032870,GO:0035556,GO:0042221,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0070887,GO:0071310,GO:0071369,GO:0071495,GO:0097708,GO:0098791 3.6.3.54 0.0000958 51.0
DYD3_k127_6793320_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007248 438.0
DYD3_k127_6793320_1 leucine- rich repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008198 337.0
DYD3_k127_6793320_2 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006536 279.0
DYD3_k127_6793320_3 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000006759 188.0
DYD3_k127_6793320_4 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.00000000000000000000000000000000000000004379 153.0
DYD3_k127_6793320_5 FtsZ-dependent cytokinesis - - - 0.00000000000000000000000000005704 127.0
DYD3_k127_6805500_0 gluconolactonase K01053 - 3.1.1.17 0.00000000000000000000000000001148 119.0
DYD3_k127_6805500_1 - - - - 0.00000000000000001591 93.0
DYD3_k127_6809078_0 ABC transporter transmembrane region K18890 - - 6.876e-281 872.0
DYD3_k127_6809659_0 of the AAA class - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003221 458.0
DYD3_k127_6809659_1 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001308 264.0
DYD3_k127_6809659_2 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.000000000000000000000000000000000000000000000000000000000000000001513 230.0
DYD3_k127_6809659_3 DoxX-like family - - - 0.00000000000000000000000000000000000000000000000000000001348 199.0
DYD3_k127_6809659_4 PFAM Bacterial regulatory protein, arsR family - - - 0.0000000000000000000000000000000000000000000000000000004397 195.0
DYD3_k127_6814129_0 Oxidoreductase domain protein - - - 1.363e-228 713.0
DYD3_k127_6814129_1 Oxidoreductase domain protein - - - 7.129e-222 694.0
DYD3_k127_6814129_2 Domain of Unknown Function (DUF1080) - - - 5.569e-202 637.0
DYD3_k127_6814129_3 Glycosyl hydrolase family 65, N-terminal domain K15923 - 3.2.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006889 471.0
DYD3_k127_6814129_4 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008744 359.0
DYD3_k127_6814129_5 Oxidoreductase family, C-terminal alpha beta domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009775 344.0
DYD3_k127_6814129_6 Domain of unknown function (DUF4359) - - - 0.000002543 53.0
DYD3_k127_6817464_0 GDSL-like Lipase/Acylhydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008567 379.0
DYD3_k127_6817464_1 DHHW protein - - - 0.000000000000000000000000000000000000000000000000000000001156 213.0
DYD3_k127_6817464_2 - - - - 0.000000000000000000000007073 101.0
DYD3_k127_6817464_3 Transglycosylase SLT domain K08307 - - 0.000003654 60.0
DYD3_k127_683188_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0 1297.0
DYD3_k127_683188_1 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573,K12585 - - 1.611e-300 936.0
DYD3_k127_683188_10 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006161 381.0
DYD3_k127_683188_11 PFAM Glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000269 379.0
DYD3_k127_683188_12 Belongs to the FPP GGPP synthase family K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 366.0
DYD3_k127_683188_13 Creatinine amidohydrolase K01470 - 3.5.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003298 347.0
DYD3_k127_683188_14 PFAM Cyclic nucleotide-binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000016 260.0
DYD3_k127_683188_15 WG containing repeat - - - 0.00000000000000000000000000000000000000000000000000000005364 214.0
DYD3_k127_683188_16 DUF218 domain - - - 0.0000000000000000000000000000000000000000000000000002515 193.0
DYD3_k127_683188_17 Predicted membrane protein (DUF2306) - - - 0.000000000000000000000000000000000000000000000000181 183.0
DYD3_k127_683188_18 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000000000000001709 165.0
DYD3_k127_683188_19 - - - - 0.00000000000000000000000000000000000001852 151.0
DYD3_k127_683188_2 FtsX-like permease family - - - 3.371e-273 861.0
DYD3_k127_683188_20 Cysteine-rich secretory protein family - - - 0.0000000000000000000000000000000000008204 147.0
DYD3_k127_683188_21 - - - - 0.00000000000000000000000001676 114.0
DYD3_k127_683188_22 - - - - 0.0000000000000000000378 94.0
DYD3_k127_683188_23 - - - - 0.000000000000000003646 86.0
DYD3_k127_683188_24 Plasmid stabilization system - - - 0.000000000000004112 77.0
DYD3_k127_683188_25 Leucine-rich repeat (LRR) protein - - - 0.000000008406 66.0
DYD3_k127_683188_26 nuclease activity - - - 0.000008774 49.0
DYD3_k127_683188_3 Belongs to the Glu Leu Phe Val dehydrogenases family K00262 GO:0003674,GO:0003824,GO:0004353,GO:0004354,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009986,GO:0009987,GO:0016053,GO:0016491,GO:0016638,GO:0016639,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.4 2.295e-221 693.0
DYD3_k127_683188_4 Carboxylesterase family K03929 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004868 582.0
DYD3_k127_683188_5 Amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002179 515.0
DYD3_k127_683188_6 beta-1,4-mannooligosaccharide phosphorylase K21065 - 3.2.1.197 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006139 453.0
DYD3_k127_683188_7 Amino acid permease K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001323 439.0
DYD3_k127_683188_8 Alpha/beta hydrolase family K01563,K22318 - 3.8.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001587 431.0
DYD3_k127_683188_9 Belongs to the hyi family K01816 - 5.3.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001908 398.0
DYD3_k127_6871977_0 PFAM Aldehyde dehydrogenase K13877 - 1.2.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 576.0
DYD3_k127_6871977_1 PFAM Stage II sporulation protein E (SpoIIE) K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008917 556.0
DYD3_k127_6871977_10 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007864 258.0
DYD3_k127_6871977_11 Glycosyl transferase family 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005423 252.0
DYD3_k127_6871977_12 PFAM Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000006654 228.0
DYD3_k127_6871977_13 - - - - 0.000000000000000000000000000000000000000000000000000000005204 207.0
DYD3_k127_6871977_14 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000000000000000000000000000000003359 196.0
DYD3_k127_6871977_15 Protein of unknown function (DUF3667) - - - 0.0000000000000000000000000000002938 133.0
DYD3_k127_6871977_2 PFAM D-aminoacylase, C-terminal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002051 543.0
DYD3_k127_6871977_3 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00015 - 1.1.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 395.0
DYD3_k127_6871977_4 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009596 368.0
DYD3_k127_6871977_5 Putative collagen-binding domain of a collagenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002539 336.0
DYD3_k127_6871977_6 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000669 346.0
DYD3_k127_6871977_7 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002296 302.0
DYD3_k127_6871977_8 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004694 279.0
DYD3_k127_6871977_9 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000001336 261.0
DYD3_k127_687847_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 1.543e-203 647.0
DYD3_k127_687847_1 Belongs to the proline racemase family K12658 - 5.1.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007101 574.0
DYD3_k127_687847_10 TIGRFAM Addiction module toxin, Txe YoeB K19158 - - 0.000000000000000000000000003787 112.0
DYD3_k127_687847_11 - K19159 - - 0.0000000004143 63.0
DYD3_k127_687847_2 Amidohydrolase K03392 - 4.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003891 554.0
DYD3_k127_687847_3 PFAM FAD dependent oxidoreductase K00285 - 1.4.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001642 477.0
DYD3_k127_687847_4 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002642 383.0
DYD3_k127_687847_5 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 324.0
DYD3_k127_687847_6 PFAM Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000005713 265.0
DYD3_k127_687847_7 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000001231 231.0
DYD3_k127_687847_8 heat shock protein binding - - - 0.000000000000000000000000000000000000000000000000002532 189.0
DYD3_k127_687847_9 RNA recognition motif - - - 0.000000000000000000000000000000131 126.0
DYD3_k127_688471_0 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000003721 240.0
DYD3_k127_688471_1 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 - 3.1.3.11 0.000000000000000000000000000000000000000000000000000000000000000002165 228.0
DYD3_k127_688471_2 - - - - 0.0000000000000000000000000000000000000000000001533 171.0
DYD3_k127_6887948_0 Motility related/secretion protein - - - 0.0 2252.0
DYD3_k127_6887948_1 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000003124 240.0
DYD3_k127_6901140_0 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 - 5.4.99.13 0.0 1776.0
DYD3_k127_6901140_1 Peptidase S16, lon domain protein K01338,K07157 - 3.4.21.53 0.00000000000000000000000000000000000000000000004869 175.0
DYD3_k127_6901140_2 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.000000000000000000002393 95.0
DYD3_k127_6901140_3 Tellurite resistance protein TerB - - - 0.0000000000000001272 87.0
DYD3_k127_6901140_4 PFAM TonB-dependent Receptor Plug - - - 0.000000004788 59.0
DYD3_k127_6901140_5 Metallo-peptidase family M12B Reprolysin-like - - - 0.000148 51.0
DYD3_k127_6904882_0 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 6.229e-232 730.0
DYD3_k127_6904882_1 Two component regulator propeller - - - 3.044e-225 732.0
DYD3_k127_6904882_2 Mate efflux family protein K03327 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001467 525.0
DYD3_k127_6904882_3 PFAM Transglycosylase SLT domain K08307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001474 457.0
DYD3_k127_6904882_4 PFAM NAD-dependent glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008194 432.0
DYD3_k127_6904882_5 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001836 284.0
DYD3_k127_6909297_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01867 - 6.1.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006043 520.0
DYD3_k127_6909297_1 Protein of unknown function (DUF1573) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001407 278.0
DYD3_k127_6909297_2 Glutamine cyclotransferase K00683 - 2.3.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000001049 247.0
DYD3_k127_6909297_3 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain K07117 - - 0.00000000000000000000000000000000000000000025 161.0
DYD3_k127_6909297_4 Belongs to the glycosyl hydrolase 57 family - - - 0.00000000000000000000001279 107.0
DYD3_k127_6909297_5 Thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000002269 95.0
DYD3_k127_6918150_0 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 302.0
DYD3_k127_6918150_1 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003709 270.0
DYD3_k127_6918150_2 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.000000000000000000000000000000000000000000000000000000000000000001118 236.0
DYD3_k127_6918150_3 - - - - 0.00000000000000000000000000000000000000000000000000000005688 203.0
DYD3_k127_6918150_4 FeoA K04758 - - 0.000000000000000000006924 93.0
DYD3_k127_6926901_0 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 587.0
DYD3_k127_6926901_1 acetolactate synthase K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000007897 219.0
DYD3_k127_6926901_3 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 GO:0006082,GO:0006520,GO:0006566,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009987,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564,GO:1901605 4.3.1.19 0.000000000000000003367 87.0
DYD3_k127_6955223_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0 1049.0
DYD3_k127_6955223_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 5.001e-224 711.0
DYD3_k127_6955223_2 Domain of Unknown Function (DUF349) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000339 586.0
DYD3_k127_6955223_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002099 522.0
DYD3_k127_6955223_4 Thioredoxin reductase K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 496.0
DYD3_k127_6955223_5 PFAM GlcNAc-PI de-N-acetylase K01463 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003613 325.0
DYD3_k127_6955223_6 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003427 280.0
DYD3_k127_6955223_7 Belongs to the UPF0301 (AlgH) family K07735 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002148 252.0
DYD3_k127_6955223_8 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000009673 137.0
DYD3_k127_6959441_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1290.0
DYD3_k127_6959441_1 - - - - 0.000000000000000000000000000000000000000000000002528 177.0
DYD3_k127_6959441_2 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000001807 159.0
DYD3_k127_6965467_0 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K01897 - 6.2.1.3 1.327e-217 688.0
DYD3_k127_6965467_1 Periplasmic component of the Tol biopolymer transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003206 461.0
DYD3_k127_6995282_0 cellulose binding - - - 0.0 1230.0
DYD3_k127_6995282_1 PFAM Oxidoreductase family, NAD-binding Rossmann fold - - - 3.728e-244 761.0
DYD3_k127_6995282_2 Oxidoreductase - - - 1.737e-204 645.0
DYD3_k127_6995282_3 lycopene cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004982 275.0
DYD3_k127_6995282_4 Gluconate 2-dehydrogenase subunit 3 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000445 263.0
DYD3_k127_6995282_5 PFAM Fatty acid hydroxylase K15746 - 1.14.15.24 0.00000000000000000000000000000000000000000000000000000000000000000003771 235.0
DYD3_k127_6995282_6 NUDIX domain K01823 - 5.3.3.2 0.00000000000000000000000000000000000000000000000000000000000001235 220.0
DYD3_k127_6995282_7 DNA photolyase K01669 - 4.1.99.3 0.0000000000000000000000000000000000000000000000000000001527 195.0
DYD3_k127_6995282_8 SRPBCC domain-containing protein - - - 0.00000000000000000000000000000000000000000136 160.0
DYD3_k127_6995282_9 Oxidoreductase - - - 0.000000000000000001469 85.0
DYD3_k127_7000524_0 PFAM AMP-dependent synthetase and ligase K01907 - 6.2.1.16 1.27e-234 743.0
DYD3_k127_7000524_1 Belongs to the enoyl-CoA hydratase isomerase family K01692,K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008396 409.0
DYD3_k127_7000524_2 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004519 364.0
DYD3_k127_7000524_3 TIGRFAM Gliding motility-associated protein, GldC - - - 0.00000000000000000000000000000000000003994 145.0
DYD3_k127_7000524_4 PFAM TonB-dependent Receptor Plug - - - 0.0000000000000000001698 91.0
DYD3_k127_7000524_5 - - - - 0.000000000000002193 82.0
DYD3_k127_7004106_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 1.053e-215 677.0
DYD3_k127_7004106_1 Belongs to the BshC family K22136 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000806 531.0
DYD3_k127_7004106_2 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 - 5.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007122 345.0
DYD3_k127_7004106_3 OmpA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005086 289.0
DYD3_k127_7004106_5 Protein of unknown function (DUF2911) - - - 0.0000000000000000000000000000000000000000000000005804 180.0
DYD3_k127_7004106_6 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.0000000000000000000000000000000000362 141.0
DYD3_k127_7006512_0 C-terminal domain of CHU protein family - - - 8.12e-241 777.0
DYD3_k127_7006512_1 signal peptide peptidase SppA, 36K type K04773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006819 586.0
DYD3_k127_7006512_2 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000068 449.0
DYD3_k127_7006512_3 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 374.0
DYD3_k127_7006512_4 FAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 305.0
DYD3_k127_7006512_5 Protein of unknown function, DUF393 - - - 0.00000000000000000000000000000000000000000000004536 172.0
DYD3_k127_7006512_6 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.00000000000000000000000000000000000000003412 157.0
DYD3_k127_7006512_7 Bacterial transcriptional repressor - - - 0.00000000006293 64.0
DYD3_k127_702652_0 two component, sigma54 specific, transcriptional regulator, Fis family - - - 4.067e-234 731.0
DYD3_k127_702652_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008952 500.0
DYD3_k127_702652_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004256 483.0
DYD3_k127_702652_3 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 471.0
DYD3_k127_702652_4 PFAM Family of - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003852 419.0
DYD3_k127_702652_5 Cell wall-associated hydrolase (invasion-associated protein) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004951 248.0
DYD3_k127_702652_6 beta-lactamase activity K01058,K07502 - 3.1.1.32,3.1.1.4 0.0000000000000000000000000000000000000000000000000000000000000001963 225.0
DYD3_k127_702652_7 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.000000000000000000000000000000000000000000000000000000000000005225 219.0
DYD3_k127_702652_8 HNH endonuclease - - - 0.0000000000000000000000000000000000000000000000000000000000001079 216.0
DYD3_k127_702652_9 Thioesterase - - - 0.000000000000000000000000000000000000003381 150.0
DYD3_k127_7050345_0 PDZ DHR GLGF domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 315.0
DYD3_k127_7050345_1 TIGRFAM comF family protein K00764 - 2.4.2.14 0.0000000000000000000000000000000000000000000000000000000000000000008849 237.0
DYD3_k127_7050345_2 Belongs to the LOG family K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000005815 206.0
DYD3_k127_7050345_3 - - - - 0.000000000000000000000000000000000000000000000000002175 184.0
DYD3_k127_7050345_4 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000000000000000000000000000000000001304 178.0
DYD3_k127_7050345_5 - - - - 0.00000000000000000000006534 106.0
DYD3_k127_7050345_6 Protein of unknown function (DUF2911) - - - 0.000000000001299 70.0
DYD3_k127_7050345_7 Sulfur reduction protein DsrE - - - 0.000005754 49.0
DYD3_k127_7060418_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787,K15726 - - 0.0 1808.0
DYD3_k127_7060418_1 TonB-dependent Receptor Plug - - - 1.023e-218 699.0
DYD3_k127_7060418_11 Alpha-acetolactate decarboxylase K01575 - 4.1.1.5 0.0000000000000002557 82.0
DYD3_k127_7060418_12 Protein of unknown function (DUF3347) - - - 0.00000000003316 67.0
DYD3_k127_7060418_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798,K15727 - - 8.632e-195 623.0
DYD3_k127_7060418_3 exo-alpha-(2->6)-sialidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003375 430.0
DYD3_k127_7060418_4 PFAM Xylose isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002826 398.0
DYD3_k127_7060418_5 PFAM Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 393.0
DYD3_k127_7060418_6 Response regulator receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005497 330.0
DYD3_k127_7060418_7 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 321.0
DYD3_k127_7060418_8 Thioredoxin-like - - - 0.000000000000000000000000000000000000000001838 160.0
DYD3_k127_7060418_9 Alpha-acetolactate decarboxylase K01575 - 4.1.1.5 0.000000000000000000001633 98.0
DYD3_k127_7074153_0 - - - - 0.00000000000000000000000000000000000000000000000005734 181.0
DYD3_k127_7074153_2 amine dehydrogenase activity - - - 0.0000000000001269 84.0
DYD3_k127_7074153_3 Pfam Transposase IS200 like - - - 0.00000006569 55.0
DYD3_k127_7074153_4 YtxH-like protein - - - 0.0003852 45.0
DYD3_k127_7083515_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006165 340.0
DYD3_k127_7083515_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000005856 254.0
DYD3_k127_7086916_0 MacB-like periplasmic core domain K02004 - - 0.0 1189.0
DYD3_k127_7086916_1 permease K02004 - - 7.391e-247 790.0
DYD3_k127_7086916_2 3-oxo-5-alpha-steroid 4-dehydrogenase activity K09591,K10901,K12343,K12344,K14570 GO:0000003,GO:0000166,GO:0001501,GO:0001505,GO:0001655,GO:0001889,GO:0003006,GO:0003674,GO:0003824,GO:0003865,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006082,GO:0006091,GO:0006629,GO:0006694,GO:0006702,GO:0006706,GO:0006720,GO:0006721,GO:0006725,GO:0006805,GO:0006807,GO:0006950,GO:0007154,GO:0007267,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0007530,GO:0007548,GO:0007610,GO:0007622,GO:0007623,GO:0008150,GO:0008152,GO:0008202,GO:0008207,GO:0008209,GO:0008406,GO:0008584,GO:0008610,GO:0009055,GO:0009056,GO:0009058,GO:0009267,GO:0009410,GO:0009605,GO:0009636,GO:0009719,GO:0009725,GO:0009917,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010268,GO:0010817,GO:0012505,GO:0014070,GO:0014074,GO:0014823,GO:0014850,GO:0016020,GO:0016042,GO:0016101,GO:0016128,GO:0016129,GO:0016131,GO:0016132,GO:0016229,GO:0016491,GO:0016614,GO:0016616,GO:0016627,GO:0016628,GO:0016999,GO:0017144,GO:0018879,GO:0018894,GO:0018958,GO:0018963,GO:0019752,GO:0021510,GO:0021536,GO:0021537,GO:0021543,GO:0021761,GO:0021766,GO:0021794,GO:0021854,GO:0021983,GO:0021987,GO:0022410,GO:0022414,GO:0022900,GO:0023052,GO:0030283,GO:0030431,GO:0030539,GO:0030540,GO:0030900,GO:0031667,GO:0031668,GO:0031669,GO:0031960,GO:0031984,GO:0032354,GO:0032355,GO:0032501,GO:0032502,GO:0032868,GO:0032869,GO:0032870,GO:0033218,GO:0033554,GO:0033574,GO:0033764,GO:0033765,GO:0033993,GO:0034641,GO:0034698,GO:0034754,GO:0035270,GO:0035690,GO:0036094,GO:0036477,GO:0042133,GO:0042175,GO:0042180,GO:0042181,GO:0042221,GO:0042428,GO:0042430,GO:0042445,GO:0042446,GO:0042448,GO:0042493,GO:0042537,GO:0042592,GO:0042594,GO:0042745,GO:0042747,GO:0042995,GO:0043005,GO:0043025,GO:0043167,GO:0043168,GO:0043209,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043434,GO:0043436,GO:0043627,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044297,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045137,GO:0046483,GO:0046546,GO:0046660,GO:0046661,GO:0046677,GO:0046683,GO:0048037,GO:0048471,GO:0048511,GO:0048512,GO:0048513,GO:0048545,GO:0048608,GO:0048731,GO:0048732,GO:0048806,GO:0048856,GO:0048878,GO:0050213,GO:0050661,GO:0050662,GO:0050802,GO:0050896,GO:0051384,GO:0051591,GO:0051716,GO:0055088,GO:0055114,GO:0060322,GO:0060348,GO:0060416,GO:0060992,GO:0061008,GO:0061370,GO:0061458,GO:0065007,GO:0065008,GO:0070402,GO:0070848,GO:0070852,GO:0070887,GO:0071310,GO:0071320,GO:0071363,GO:0071375,GO:0071383,GO:0071384,GO:0071385,GO:0071392,GO:0071394,GO:0071396,GO:0071407,GO:0071417,GO:0071466,GO:0071495,GO:0071496,GO:0071548,GO:0071549,GO:0071704,GO:0071867,GO:0071868,GO:0071869,GO:0071870,GO:0071871,GO:0071872,GO:0097159,GO:0097164,GO:0097327,GO:0097458,GO:0098827,GO:0120025,GO:1901160,GO:1901265,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901575,GO:1901576,GO:1901615,GO:1901617,GO:1901652,GO:1901653,GO:1901654,GO:1901655,GO:1901698,GO:1901699,GO:1901700,GO:1901701 1.3.1.22,3.6.4.12 0.000000000000000000000000000000000000000000000000000000001041 209.0
DYD3_k127_7086916_3 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000000000000000000000001013 176.0
DYD3_k127_7097257_0 Domain of unknown function (DUF389) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000485 481.0
DYD3_k127_7097257_1 Xylose isomerase domain protein TIM barrel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 399.0
DYD3_k127_7097257_2 7TM diverse intracellular signalling - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 409.0
DYD3_k127_7097257_3 nuclear chromosome segregation K09892 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007591 311.0
DYD3_k127_7097257_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002834 259.0
DYD3_k127_7097257_5 Peptidyl-prolyl cis-trans isomerase K03773 - 5.2.1.8 0.00000000000000000000000000000001082 136.0
DYD3_k127_710432_0 GDSL family lipolytic protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005156 403.0
DYD3_k127_710432_1 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03386 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005909 362.0
DYD3_k127_710432_2 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005587 366.0
DYD3_k127_710432_3 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000001589 187.0
DYD3_k127_7112265_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 1.448e-294 918.0
DYD3_k127_7112265_1 ribonuclease, Rne Rng family K08301 - - 1.044e-241 756.0
DYD3_k127_7112265_10 - - - - 0.00001681 48.0
DYD3_k127_7112265_11 translation initiation factor activity K12573 - - 0.0001057 49.0
DYD3_k127_7112265_2 A G-specific adenine glycosylase K03575 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002534 358.0
DYD3_k127_7112265_3 TIGRFAM gliding motility-associated lipoprotein GldD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001812 258.0
DYD3_k127_7112265_4 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000004344 209.0
DYD3_k127_7112265_5 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.00000000000000000000000000000000000000000000000000000003404 199.0
DYD3_k127_7112265_6 - - - - 0.0000000000000000000000000000000000000000000000000000001084 205.0
DYD3_k127_7112265_7 ankyrin repeats - - - 0.00000000000000000000000000000000000000000000008264 177.0
DYD3_k127_7112265_8 Belongs to the bacterial histone-like protein family K03530 - - 0.00000000000000000000000000000000000000000001863 163.0
DYD3_k127_7112265_9 PFAM Penicillinase repressor - - - 0.0000000000000000000000000000000000000000001478 160.0
DYD3_k127_7133673_0 Protein of unknown function (DUF3078) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000223 301.0
DYD3_k127_7133673_1 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000000001727 216.0
DYD3_k127_7133673_2 PFAM Transglycosylase SLT domain K08307 - - 0.000000000000000000000000000000000000000001607 169.0
DYD3_k127_7133673_3 acetyltransferase K22441 - 2.3.1.57 0.000000000003551 70.0
DYD3_k127_7138352_0 glutamate synthase K00265,K00284 - 1.4.1.13,1.4.1.14,1.4.7.1 0.0 2151.0
DYD3_k127_7138352_1 TIGRFAM glutamate synthases, NADH NADPH, small subunit K00266 - 1.4.1.13,1.4.1.14 1.867e-225 707.0
DYD3_k127_7138352_2 COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related - - - 0.0000000000000000000000000000000000000000006851 158.0
DYD3_k127_7138352_3 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.0000001379 58.0
DYD3_k127_7140549_0 PFAM PBS lyase - - - 0.0 1457.0
DYD3_k127_7140549_1 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 4.84e-322 992.0
DYD3_k127_7140549_10 - - - - 0.00000000000000000000000005787 111.0
DYD3_k127_7140549_11 Acyl carrier protein phosphodiesterase - - - 0.0000000008363 60.0
DYD3_k127_7140549_13 PFAM Plasmid stabilisation system K06218 - - 0.0000004239 52.0
DYD3_k127_7140549_2 Belongs to the ompA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001906 588.0
DYD3_k127_7140549_3 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002305 361.0
DYD3_k127_7140549_4 chorismate binding enzyme K01665 - 2.6.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003311 336.0
DYD3_k127_7140549_5 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001771 291.0
DYD3_k127_7140549_6 Transcriptional regulatory protein, C terminal K07665 - - 0.0000000000000000000000000000000000000000000000000000000000000000003185 235.0
DYD3_k127_7140549_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000001198 227.0
DYD3_k127_7140549_8 HAMP domain - - - 0.000000000000000000000000000000000000000000000000001184 199.0
DYD3_k127_7140549_9 Branched-chain amino acid aminotransferase K02619 - 4.1.3.38 0.00000000000000000000000000000000007283 140.0
DYD3_k127_7157946_0 TIGRFAM Aspartate kinase K12524 - 1.1.1.3,2.7.2.4 1.927e-274 859.0
DYD3_k127_7157946_1 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 - 2.7.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004992 351.0
DYD3_k127_7174038_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001906 479.0
DYD3_k127_7174038_1 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.000000000000000000000000000000000000000000003917 166.0
DYD3_k127_7174038_2 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000000000000000000000006409 161.0
DYD3_k127_7174038_3 RDD family - - - 0.00000000000000000000000000000000001577 142.0
DYD3_k127_7174038_4 - - - - 0.00000000000000000000000000003677 126.0
DYD3_k127_7174038_5 Transposase domain (DUF772) - - - 0.000000000000000000008409 93.0
DYD3_k127_7183828_0 Peptidase M1, membrane alanine aminopeptidase - - - 3.293e-251 786.0
DYD3_k127_7183828_1 COG1680 Beta-lactamase class C and other penicillin binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 520.0
DYD3_k127_7183828_2 arabinogalactan K01224 - 3.2.1.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006669 492.0
DYD3_k127_7183828_3 Belongs to the UPF0312 family - - - 0.000000000000000000000000000000000000000000000000000000000883 205.0
DYD3_k127_7183828_4 - - - - 0.000000000000000000001597 98.0
DYD3_k127_7185832_0 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005769 503.0
DYD3_k127_7185832_1 C-terminal region of aryl-sulfatase K01130 - 3.1.6.1 0.000000000000000000000000000000000000000000000000000000000000048 217.0
DYD3_k127_7185832_2 TIGRFAM Peroxiredoxin, osmotically inducible protein C, subgroup K04063 - - 0.0000000000000000000000000000000000000000000000000000000105 200.0
DYD3_k127_7185832_3 MacB-like periplasmic core domain K02004 - - 0.00001355 48.0
DYD3_k127_7195732_0 rhamnulose-1-phosphate aldolase alcohol dehydrogenase - - - 0.0 1212.0
DYD3_k127_7195732_1 COGs COG1680 Beta-lactamase class C and other penicillin binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008456 450.0
DYD3_k127_7195732_10 YceI-like domain - - - 0.00000000000000000000000000001679 124.0
DYD3_k127_7195732_11 - - - - 0.000000000000000000008751 99.0
DYD3_k127_7195732_12 CinA-like protein K03742,K03743 - 3.5.1.42 0.000000000000000001377 86.0
DYD3_k127_7195732_2 Fumarylacetoacetate (FAA) hydrolase K16171 - 3.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002712 430.0
DYD3_k127_7195732_3 L-rhamnose-proton symport protein (RhaT) K02856 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 405.0
DYD3_k127_7195732_4 Sodium:neurotransmitter symporter family K03308 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007739 394.0
DYD3_k127_7195732_5 Psort location Cytoplasmic, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003394 364.0
DYD3_k127_7195732_6 Enoyl-(Acyl carrier protein) reductase K08081 - 1.1.1.206 0.00000000000000000000000000000000000000000000000000000000000000000000000000153 266.0
DYD3_k127_7195732_7 Haem-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000004269 229.0
DYD3_k127_7195732_8 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000008325 214.0
DYD3_k127_7195732_9 Involved in the anomeric conversion of L-rhamnose K03534 - 5.1.3.32 0.0000000000000000000000000000000000002133 154.0
DYD3_k127_7203095_0 MFS/sugar transport protein K16211 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004352 328.0
DYD3_k127_7203095_1 enterobactin catabolic process K07214 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003443 317.0
DYD3_k127_7203095_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009113 248.0
DYD3_k127_7204751_0 Circularly permuted ATP-grasp type 2 - - - 2.412e-250 778.0
DYD3_k127_7204751_1 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 - 2.7.1.30 9.769e-233 728.0
DYD3_k127_7204751_2 C-terminal domain of alpha-glycerophosphate oxidase K00111 - 1.1.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002271 579.0
DYD3_k127_7204751_3 A predicted alpha-helical domain with a conserved ER motif. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007189 514.0
DYD3_k127_7204751_4 A predicted alpha-helical domain with a conserved ER motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004378 398.0
DYD3_k127_7204751_5 COGs COG1305 Transglutaminase-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001537 374.0
DYD3_k127_7204751_6 Transglutaminase/protease-like homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009843 304.0
DYD3_k127_7220955_0 PFAM Class III cytochrome C family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008059 484.0
DYD3_k127_7220955_1 ABC transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004529 383.0
DYD3_k127_7220955_2 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000004941 231.0
DYD3_k127_7220955_3 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000006913 209.0
DYD3_k127_7220955_4 4Fe-4S dicluster domain K00184 - - 0.0000000000000000000000000000000000000000000000000248 181.0
DYD3_k127_7220955_5 OmpA family - - - 0.0000000000000000000000000000116 122.0
DYD3_k127_7220955_6 - - - - 0.000000000000000006473 91.0
DYD3_k127_7224564_0 Beta-lactamase class C and other penicillin binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 573.0
DYD3_k127_7224564_1 membrane protease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002985 412.0
DYD3_k127_7224564_2 Domain of Unknown Function (DUF1080) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004351 312.0
DYD3_k127_7224564_3 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain - - - 0.00000000000000000000000000000000000000000000005353 171.0
DYD3_k127_7224564_4 Domain of Unknown Function (DUF1080) - - - 0.000000000000000000000000000000000000000003435 156.0
DYD3_k127_7224564_5 - - - - 0.0000000000000000001012 90.0
DYD3_k127_7224564_6 - - - - 0.000000000000005639 81.0
DYD3_k127_7224564_7 - K01188 GO:0000003,GO:0003002,GO:0003006,GO:0003674,GO:0004857,GO:0007275,GO:0007389,GO:0008150,GO:0009791,GO:0009908,GO:0022414,GO:0030234,GO:0032501,GO:0032502,GO:0043086,GO:0044092,GO:0048367,GO:0048608,GO:0048731,GO:0048832,GO:0048833,GO:0048856,GO:0050789,GO:0050790,GO:0050793,GO:0061458,GO:0065007,GO:0065009,GO:0090567,GO:0098772 3.2.1.21 0.000000001454 70.0
DYD3_k127_7226126_0 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 4.227e-257 799.0
DYD3_k127_7226126_1 - - - - 9.277e-207 653.0
DYD3_k127_7226126_2 Dipeptidyl peptidase IV (DPP IV) N-terminal region K01278 - 3.4.14.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002813 528.0
DYD3_k127_7226126_3 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002564 445.0
DYD3_k127_7226126_4 CarboxypepD_reg-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 447.0
DYD3_k127_7226126_5 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000003859 196.0
DYD3_k127_7226126_6 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.0000000000000000006834 89.0
DYD3_k127_7226126_7 - - - - 0.00000004741 59.0
DYD3_k127_7227291_0 MacB-like periplasmic core domain K02004 - - 1.499e-278 878.0
DYD3_k127_7227291_1 Domain of unknown function (DUF4440) - - - 0.000000000000000000000000000000007405 132.0
DYD3_k127_7227291_2 tRNA wobble adenosine to inosine editing - - - 0.00000000000751 70.0
DYD3_k127_7227291_3 Putative auto-transporter adhesin, head GIN domain - - - 0.00008495 50.0
DYD3_k127_7227850_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001644 493.0
DYD3_k127_7227850_1 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001726 379.0
DYD3_k127_7227850_2 Metallo-beta-lactamase superfamily K06136 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003634 346.0
DYD3_k127_7227850_3 COGs COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein K03640 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000234 342.0
DYD3_k127_7227850_4 TIGRFAM Bacteroidetes-specific - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001818 269.0
DYD3_k127_7227850_5 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000006965 226.0
DYD3_k127_7227850_6 TIGRFAM Bacterial surface protein 26-residue repeat - - - 0.0000000000002207 85.0
DYD3_k127_723141_0 PFAM TonB-dependent Receptor Plug - - - 4.893e-215 698.0
DYD3_k127_723141_1 Oxygenase, catalysing oxidative methylation of damaged DNA K09990 - - 0.0000000000000000000000000000000000000000001901 160.0
DYD3_k127_723141_2 Domain of unknown function (DUF4249) - - - 0.000000000000000000000000000001138 134.0
DYD3_k127_723141_3 Large extracellular alpha-helical protein - - - 0.0000000000000003716 89.0
DYD3_k127_725026_0 COGs COG3666 Transposase and inactivated derivatives - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003653 434.0
DYD3_k127_725026_1 Protein of unknown function (DUF2442) - - - 0.0000000000000000000001054 99.0
DYD3_k127_725026_2 Domain of unknown function (DUF4160) - - - 0.00000000001896 66.0
DYD3_k127_727335_0 TonB-dependent Receptor Plug K02014 - - 0.00000000000000000000000000000000000000000000000000000000001064 218.0
DYD3_k127_727335_1 - - - - 0.0000000000000000000000000000000000000000000007743 173.0
DYD3_k127_727335_2 Sigma-70, region 4 K03088 - - 0.00000000007469 64.0
DYD3_k127_732410_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001614 510.0
DYD3_k127_732410_1 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000279 310.0
DYD3_k127_732410_2 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002491 302.0
DYD3_k127_732410_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009205 279.0
DYD3_k127_732410_4 - - - - 0.0000000000000000000000000002232 118.0
DYD3_k127_744908_0 TIGRFAM acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 1.266e-255 792.0
DYD3_k127_744908_1 prohibitin homologues K07192 - - 6.243e-218 686.0
DYD3_k127_744908_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 GO:0003674,GO:0003824,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009987,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0033818,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0071704 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 506.0
DYD3_k127_744908_3 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000007116 238.0
DYD3_k127_744908_4 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.00000000000000000000000000000000000000000000000000000001861 202.0
DYD3_k127_744908_5 Uncharacterized ACR, COG1399 - - - 0.000000000000000000000000000001047 124.0
DYD3_k127_744908_6 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.0000000000000000000000000002502 114.0
DYD3_k127_744908_7 prohibitin homologues K07192 - - 0.00000000000000000000001147 102.0
DYD3_k127_746183_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 - 6.1.1.15 1.298e-251 783.0
DYD3_k127_746183_1 TIGRFAM L-rhamnose catabolism isomerase, Pseudomonas stutzeri subtype K01820 - 5.3.1.14 1.349e-212 666.0
DYD3_k127_746183_10 - - - - 0.0000000007919 70.0
DYD3_k127_746183_2 FMN-dependent dehydrogenase K00101 - 1.1.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002309 591.0
DYD3_k127_746183_3 Carbohydrate kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001981 508.0
DYD3_k127_746183_4 UPF0365 protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008749 491.0
DYD3_k127_746183_5 TIGRFAM 6-pyruvoyl tetrahydropterin synthase QueD family protein K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000006597 252.0
DYD3_k127_746183_6 NfeD-like C-terminal, partner-binding - - - 0.00000000000000000000000000000000000000002678 156.0
DYD3_k127_746183_7 PFAM Outer membrane protein transport protein (OMPP1 FadL TodX) - - - 0.000000000000000002016 89.0
DYD3_k127_746183_8 Protein of unknown function (DUF2628) - - - 0.000000000000000003363 91.0
DYD3_k127_746183_9 Belongs to the ompA family - - - 0.00000000002511 64.0
DYD3_k127_748656_0 TonB-dependent Receptor Plug - - - 2.773e-196 643.0
DYD3_k127_748656_1 Flavin containing amine oxidoreductase K09516 - 1.3.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 570.0
DYD3_k127_748656_2 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003326 299.0
DYD3_k127_748656_3 Domain of unknown function (DUF4249) - - - 0.0000000000000000000000000000000002178 145.0
DYD3_k127_748656_4 PFAM PAP2 superfamily K19302 GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009605,GO:0009607,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019637,GO:0042578,GO:0043207,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0046467,GO:0046493,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0051832,GO:0051834,GO:0052173,GO:0052200,GO:0071704,GO:0075136,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 3.6.1.27 0.000000000000000000000000000000005319 131.0
DYD3_k127_748656_5 TfoX N-terminal domain - - - 0.00000000000000000000000000000002136 130.0
DYD3_k127_749199_0 Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) K02551 - 2.2.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 519.0
DYD3_k127_749199_1 Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA) K01661 - 4.1.3.36 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001519 467.0
DYD3_k127_749199_2 PFAM chorismate binding enzyme K02361,K02552 - 5.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000189 346.0
DYD3_k127_749199_3 phosphoglycerate mutase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002025 243.0
DYD3_k127_749199_4 PFAM thioesterase superfamily K19222 - 3.1.2.28 0.000000000000000000000000000000000000000000000000000000000004901 210.0
DYD3_k127_749199_5 Tellurite resistance protein TerB - - - 0.000000000000000002672 87.0
DYD3_k127_755418_0 Zinc carboxypeptidase - - - 0.0 1324.0
DYD3_k127_755418_1 Phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01840 - 5.4.2.8 1.552e-201 636.0
DYD3_k127_755418_10 5'-nucleotidase, C-terminal domain K01081 - 3.1.3.5 0.00000000000000000000000000000001593 136.0
DYD3_k127_755418_11 - - - - 0.000000000000000000003398 94.0
DYD3_k127_755418_12 - - - - 0.00000000000000000003763 97.0
DYD3_k127_755418_13 TIGRFAM methyltransferase FkbM family - - - 0.00003916 48.0
DYD3_k127_755418_2 PFAM aminotransferase class V K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005925 520.0
DYD3_k127_755418_3 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005778 508.0
DYD3_k127_755418_4 PFAM MazG nucleotide pyrophosphohydrolase K02428 - 3.6.1.66 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003823 402.0
DYD3_k127_755418_5 Bacterial capsule synthesis protein PGA_cap K01081 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003358 361.0
DYD3_k127_755418_6 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006908 293.0
DYD3_k127_755418_7 COGs COG1670 Acetyltransferase including N-acetylase of ribosomal protein - - - 0.0000000000000000000000000000000000000000000000000000000000003174 215.0
DYD3_k127_755418_8 PFAM BlaR1 peptidase M56 - - - 0.0000000000000000000000000000000000000000000000000000000001198 222.0
DYD3_k127_755418_9 PFAM Penicillinase repressor - - - 0.0000000000000000000000000000000000000000000000005845 177.0
DYD3_k127_771160_0 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007781 324.0
DYD3_k127_771160_1 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005818 317.0
DYD3_k127_771160_2 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008103 325.0
DYD3_k127_771160_3 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000001303 216.0
DYD3_k127_771160_4 PhoQ Sensor - - - 0.00000000000000000000000000000000000000000000000000003546 207.0
DYD3_k127_771160_5 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000001046 190.0
DYD3_k127_771160_6 cheY-homologous receiver domain - - - 0.00000000000000000000000000000001391 131.0
DYD3_k127_771160_7 - - - - 0.000000000002184 76.0
DYD3_k127_771160_8 - - - - 0.0000003298 60.0
DYD3_k127_786111_0 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001497 407.0
DYD3_k127_786111_1 deoxyhypusine monooxygenase activity K01256,K01387 - 3.4.11.2,3.4.24.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 408.0
DYD3_k127_786111_10 Protein of unknown function (DUF1761) - - - 0.0000000000000000000000000000000000000000272 156.0
DYD3_k127_786111_11 PFAM Bacterial regulatory proteins, luxR family - - - 0.00000000000000000000000000000000000000236 150.0
DYD3_k127_786111_12 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07657,K07658 - - 0.000000000000000000000000000000000000002944 154.0
DYD3_k127_786111_13 Protein of unknown function (DUF4199) - - - 0.00000000000000000000000000000000000001356 151.0
DYD3_k127_786111_14 Pyridoxamine 5'-phosphate oxidase K07006 - - 0.0000000000000000000000002617 112.0
DYD3_k127_786111_15 BPTI/Kunitz family of serine protease inhibitors. - - - 0.00000000000000000000004721 101.0
DYD3_k127_786111_2 Glycosyl transferase family 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006377 394.0
DYD3_k127_786111_3 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004466 329.0
DYD3_k127_786111_4 Belongs to the UPF0758 family K03630 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 304.0
DYD3_k127_786111_5 Endonuclease Exonuclease Phosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000001286 243.0
DYD3_k127_786111_6 glyoxalase - - - 0.0000000000000000000000000000000000000000000000000000002814 196.0
DYD3_k127_786111_7 Domain of unknown function (DU1801) - - - 0.0000000000000000000000000000000000000000000000000000003091 198.0
DYD3_k127_786111_8 Protein of unknown function (DUF1684) K09164 - - 0.00000000000000000000000000000000000000000000000006165 184.0
DYD3_k127_786111_9 Domain of unknown function (DUF4287) - - - 0.00000000000000000000000000000000000000000001458 165.0
DYD3_k127_790010_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 1.22e-216 679.0
DYD3_k127_790010_1 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 463.0
DYD3_k127_790010_2 sulfatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002274 358.0
DYD3_k127_790010_3 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001537 332.0
DYD3_k127_790010_4 Ribose 5-phosphate isomerase K01808 - 5.3.1.6 0.00000000000000000000000000000000000000000000000000000003712 199.0
DYD3_k127_790010_5 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464 2.1.1.297 0.000000000000000000000000000000000000000000000003289 179.0
DYD3_k127_790010_6 Outer membrane protein beta-barrel domain - - - 0.000001281 59.0
DYD3_k127_799468_0 Belongs to the class-II aminoacyl-tRNA synthetase family K01880 - 6.1.1.14 3.501e-257 801.0
DYD3_k127_799468_1 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000267 471.0
DYD3_k127_799468_2 Scramblase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005703 293.0
DYD3_k127_799468_3 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002526 270.0
DYD3_k127_799468_4 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002926 247.0
DYD3_k127_799468_5 TIGRFAM TIGR02453 family protein - - - 0.00000000000000000000000000000000000000000000000000000000000003051 221.0
DYD3_k127_799468_6 Glucose-regulated metallo-peptidase M90 K09933 - - 0.0000000000000000000000000000000000000000001095 169.0
DYD3_k127_799468_7 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000001438 120.0
DYD3_k127_812227_0 magnesium chelatase K03405 - 6.6.1.1 3.624e-238 745.0
DYD3_k127_812227_1 von Willebrand factor, type A - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005916 546.0
DYD3_k127_812227_2 Fatty acid hydroxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004816 292.0
DYD3_k127_812227_3 PFAM Glyoxalase Bleomycin resistance protein Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000002755 155.0
DYD3_k127_812227_4 Divergent AAA domain - - - 0.0000000000000000002793 90.0
DYD3_k127_812227_5 PFAM Plasmid stabilisation system protein - - - 0.0000001862 54.0
DYD3_k127_842969_0 Peptidase, M28 - - - 2.06e-223 702.0
DYD3_k127_842969_1 PFAM Transketolase, C-terminal domain K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001908 495.0
DYD3_k127_842969_2 PFAM Transketolase, thiamine diphosphate binding domain K00615 - 2.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003856 456.0
DYD3_k127_842969_3 Neutral/alkaline non-lysosomal ceramidase, N-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002564 279.0
DYD3_k127_848043_0 Outer membrane protein assembly complex, YaeT protein K07277 - - 0.0 1079.0
DYD3_k127_848043_1 Aminotransferase class I and II K00639 - 2.3.1.29 1.078e-220 711.0
DYD3_k127_848043_11 SpoIIAA-like - - - 0.0000000000002988 75.0
DYD3_k127_848043_12 RDD family - - - 0.000000004265 57.0
DYD3_k127_848043_13 - - - - 0.000002125 55.0
DYD3_k127_848043_2 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008144 345.0
DYD3_k127_848043_3 long-chain fatty acid transport protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008638 336.0
DYD3_k127_848043_4 protein histidine kinase activity K20974 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 321.0
DYD3_k127_848043_5 Outer membrane protein beta-barrel domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001714 268.0
DYD3_k127_848043_6 PFAM Outer membrane protein (OmpH-like) K06142 - - 0.00000000000000000000000000000000000000000000000000000000000000000001117 237.0
DYD3_k127_848043_7 response regulator K02282 - - 0.0000000000000000000000000000000000000000000000000000000000000000002185 236.0
DYD3_k127_848043_8 PhoQ Sensor - - - 0.00000000000000000000000000000000000000000000000000117 189.0
DYD3_k127_848043_9 PFAM Outer membrane protein (OmpH-like) K06142 - - 0.000000000000000000000000000000000000000000000000004391 186.0
DYD3_k127_856121_0 aconitate hydratase K01681 - 4.2.1.3 0.0 1291.0
DYD3_k127_856121_1 TIGRFAM GTP cyclohydrolase I K01495 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002948 354.0
DYD3_k127_856121_2 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001563 341.0
DYD3_k127_856121_3 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004799 332.0
DYD3_k127_856121_4 transcriptional regulator - - - 0.000000000000000000000000000000000000000005464 159.0
DYD3_k127_856121_5 Tellurite resistance protein TerB - - - 0.0000000000000000000000000000000000004239 142.0
DYD3_k127_856121_6 synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000002397 124.0
DYD3_k127_86266_0 Polynucleotide kinase 3 phosphatase K03273 - 3.1.3.82,3.1.3.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003277 430.0
DYD3_k127_86266_1 GHMP kinase K07031 - 2.7.1.168 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003617 414.0
DYD3_k127_86266_2 SIS domain K03271 - 5.3.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000446 257.0
DYD3_k127_86266_3 PFAM Glycosyl transferase family 2 - - - 0.000000007106 60.0
DYD3_k127_868409_0 AsmA-like C-terminal region - - - 1.563e-196 642.0
DYD3_k127_868409_1 Signal transduction histidine kinase K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006042 468.0
DYD3_k127_868409_2 PFAM Glycosyl transferase family 4 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001772 309.0
DYD3_k127_868409_3 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001463 280.0
DYD3_k127_868409_4 photoreceptor activity - - - 0.0000000000000000000000000000000000000000000000000000000000000007226 235.0
DYD3_k127_868409_5 RDD family - - - 0.000000000000000000000000000000000000000000000000000003776 198.0
DYD3_k127_868409_6 GAF domain-containing protein K08968 - 1.8.4.14 0.000000000000000000000000000000000000000002427 157.0
DYD3_k127_868409_7 Cytochrome b5-like Heme/Steroid binding domain - - - 0.0000000000000000000000000000000009691 130.0
DYD3_k127_868409_8 Protein of unknown function (DUF1573) - - - 0.00000000000000000000000000001185 123.0
DYD3_k127_872400_0 - - - - 0.0 1076.0
DYD3_k127_872400_1 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 367.0
DYD3_k127_872400_2 - - - - 0.0000000001273 71.0
DYD3_k127_872884_0 CotH kinase protein - - - 2.217e-207 665.0
DYD3_k127_872884_1 Glucose--fructose oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005625 586.0
DYD3_k127_872884_10 YCII-related domain - - - 0.0000000000000000000000000000006667 124.0
DYD3_k127_872884_11 ion binding. It is involved in the biological process described with proteolysis K07763 - 3.4.24.80 0.000000000000000000004818 104.0
DYD3_k127_872884_12 Protein of unknown function (DUF1232) - - - 0.000000000000000000006437 97.0
DYD3_k127_872884_2 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007919 388.0
DYD3_k127_872884_3 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001489 332.0
DYD3_k127_872884_4 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000348 328.0
DYD3_k127_872884_5 Putative adhesin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001351 279.0
DYD3_k127_872884_6 TPM domain K06872 - - 0.00000000000000000000000000000000000000000000000000000000000000000001025 251.0
DYD3_k127_872884_7 bleomycin resistance protein K01759 - 4.4.1.5 0.00000000000000000000000000000000000000000000000000001323 190.0
DYD3_k127_872884_8 Protein of unknown function (DUF456) K09793 - - 0.000000000000000000000000000000000000000000000000001297 186.0
DYD3_k127_872884_9 Predicted membrane protein (DUF2214) K08983 - - 0.0000000000000000000000000000000000000000000003446 170.0
DYD3_k127_875571_0 COGs COG1253 Hemolysins and related protein containing CBS domains - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002449 310.0
DYD3_k127_875571_1 WYL domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003773 258.0
DYD3_k127_875571_2 Universal stress protein - - - 0.000000000000000000000000000000000000000000005636 173.0
DYD3_k127_875571_3 UPF0114 protein - - - 0.000000000000000000000000000000000000005717 152.0
DYD3_k127_875571_4 - - - - 0.000000000000000000000000000000002343 132.0
DYD3_k127_875571_5 Universal stress protein - - - 0.00000000000000000007125 91.0
DYD3_k127_875571_6 CHAD domain - - - 0.00000000000000636 84.0
DYD3_k127_875571_7 NUDIX domain - - - 0.00000000009761 68.0
DYD3_k127_875571_8 - - - - 0.00000001619 61.0
DYD3_k127_877376_0 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003183 348.0
DYD3_k127_877376_1 Participates in transcription elongation, termination and antitermination K02601 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003601 314.0
DYD3_k127_877376_2 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 299.0
DYD3_k127_877376_3 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008873 258.0
DYD3_k127_877376_4 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.000000000000000000000001248 105.0
DYD3_k127_877376_5 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.00000000000000000003913 91.0
DYD3_k127_882542_0 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. The first step is catalyzed by NqrF, which accepts electrons from NADH and reduces ubiquinone-1 to ubisemiquinone by a one-electron transfer pathway K00351 - 1.6.5.8 7.512e-237 738.0
DYD3_k127_882542_1 von Willebrand factor (vWF) type A domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 404.0
DYD3_k127_882542_10 Peptidase family C25 - - - 0.0000000000002415 73.0
DYD3_k127_882542_2 homoserine dehydrogenase K00003 - 1.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003468 357.0
DYD3_k127_882542_3 signal transduction protein with a C-terminal ATPase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004839 338.0
DYD3_k127_882542_4 Response regulator of the LytR AlgR family K02477 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002156 277.0
DYD3_k127_882542_5 PFAM Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002079 264.0
DYD3_k127_882542_6 AhpC Tsa family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005737 251.0
DYD3_k127_882542_7 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.0000000000000000000000000000000000000000000000000000000000004219 218.0
DYD3_k127_882542_8 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 - 0.000000000000000000000000009453 113.0
DYD3_k127_882542_9 homoserine dehydrogenase K00003 - 1.1.1.3 0.00000000000003351 74.0
DYD3_k127_902683_0 Belongs to the type-B carboxylesterase lipase family K03929 - - 4.489e-256 799.0
DYD3_k127_902683_1 Protein of unknown function (DUF1593) - - - 1.443e-235 737.0
DYD3_k127_902683_2 Sodium/hydrogen exchanger family K03316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003431 454.0
DYD3_k127_902683_3 NUDIX hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002495 340.0
DYD3_k127_902683_4 PFAM Histone deacetylase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001942 331.0
DYD3_k127_908918_0 lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008042 256.0
DYD3_k127_908918_1 signal transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000001817 246.0
DYD3_k127_908918_2 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000001764 150.0
DYD3_k127_910471_0 PFAM TonB-dependent Receptor Plug - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002579 458.0
DYD3_k127_910471_1 DeoR C terminal sensor domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002026 266.0
DYD3_k127_910471_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003187 254.0
DYD3_k127_910471_3 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000008441 235.0
DYD3_k127_910471_4 - - - - 0.000000000000000000000000000000000000000000000000000001255 201.0
DYD3_k127_910471_5 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000000000000000000000000000000002214 197.0
DYD3_k127_910471_6 HEAT repeats - - - 0.000000000000000000003037 104.0
DYD3_k127_920226_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 334.0
DYD3_k127_920226_2 - - - - 0.000000000000000000000000000000018 129.0
DYD3_k127_920226_3 - - - - 0.00006601 55.0
DYD3_k127_920226_4 transposase activity - - - 0.0002232 53.0
DYD3_k127_925648_0 PFAM amidohydrolase - - - 0.0 1130.0
DYD3_k127_925648_1 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0 1106.0
DYD3_k127_925648_10 Protein of unknown function (DUF3108) - - - 0.000000000000000000000000000000000000000000000000000000000000000001417 236.0
DYD3_k127_925648_11 Dehydrogenase - - - 0.000000000000002971 76.0
DYD3_k127_925648_12 phosphohistidine phosphatase, SixA K08296 - - 0.000000000002195 73.0
DYD3_k127_925648_13 Universal stress protein family - - - 0.000001168 59.0
DYD3_k127_925648_2 COG0659 Sulfate permease and related K03321 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008054 615.0
DYD3_k127_925648_3 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 550.0
DYD3_k127_925648_4 PFAM Sodium alanine symporter family K03310 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004478 529.0
DYD3_k127_925648_5 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005317 445.0
DYD3_k127_925648_6 PFAM Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002018 443.0
DYD3_k127_925648_7 Dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001986 325.0
DYD3_k127_925648_8 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001635 293.0
DYD3_k127_925648_9 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000871 273.0
DYD3_k127_930702_0 Protein of unknown function (DUF3822) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002889 320.0
DYD3_k127_930702_1 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762,K13421 - 2.4.2.10,4.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000295 278.0
DYD3_k127_930702_2 NUDIX domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007891 254.0
DYD3_k127_930702_3 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.00000000000000000000000000000000000000000000000000000000000000000005847 233.0
DYD3_k127_930702_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000001323 221.0
DYD3_k127_930702_5 Nudix hydrolase K03574 - 3.6.1.55 0.000000000000000000000000000000000002006 143.0
DYD3_k127_930702_6 TIGRFAM TIGR02757 family protein - - - 0.00000000000009058 70.0
DYD3_k127_942660_0 Protein of unknown function (DUF817) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009864 332.0
DYD3_k127_942660_1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases K22441 - 2.3.1.57 0.000000000000000000001638 95.0
DYD3_k127_943776_0 Peptidase dimerisation domain K12941 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008008 606.0
DYD3_k127_943776_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005711 569.0
DYD3_k127_943776_10 resolvase domain - - - 0.0000009819 52.0
DYD3_k127_943776_11 2',5' RNA ligase - - - 0.0000029 55.0
DYD3_k127_943776_12 PIN domain - - - 0.00001569 47.0
DYD3_k127_943776_2 C-terminal domain of CHU protein family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002466 587.0
DYD3_k127_943776_3 DNA helicase K03654 GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005657,GO:0005694,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008270,GO:0009295,GO:0009378,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017116,GO:0017117,GO:0030894,GO:0032392,GO:0032508,GO:0032991,GO:0032993,GO:0033202,GO:0033554,GO:0034641,GO:0042623,GO:0043138,GO:0043140,GO:0043142,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044446,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1902494,GO:1904949 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001882 556.0
DYD3_k127_943776_4 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007726 484.0
DYD3_k127_943776_5 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003101 379.0
DYD3_k127_943776_6 Putative beta-barrel porin-2, OmpL-like. bbp2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005933 376.0
DYD3_k127_943776_7 TPM domain - - - 0.00000000000000000000000000000000000000000000001149 180.0
DYD3_k127_943776_8 TPM domain - - - 0.00000000000000000000000000000000000000000001083 171.0
DYD3_k127_943776_9 Sh3 type 3 domain protein - - - 0.00000000000000000000000000002443 126.0
DYD3_k127_943838_0 PFAM Pyridoxal-dependent decarboxylase, C-terminal sheet domain K01585 - 4.1.1.19 8.85e-245 761.0
DYD3_k127_943838_1 Phenylacetic acid catabolic protein K02609 - 1.14.13.149 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003379 570.0
DYD3_k127_943838_2 Zn-dependent protease with chaperone function K03799,K06013 - 3.4.24.84 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 492.0
DYD3_k127_943838_3 Phenylacetic acid catabolic protein K02611 - 1.14.13.149 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 373.0
DYD3_k127_943838_4 Belongs to the arginase family K01476,K01480 - 3.5.3.1,3.5.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000046 249.0
DYD3_k127_943838_5 Phenylacetate-CoA oxygenase K02612 - - 0.000000000000000000000000000000000000000000000000000000000000000004251 228.0
DYD3_k127_943838_6 phenylacetate catabolic process K02610 - - 0.000000000000000000000000000000000000000000000000000001254 197.0
DYD3_k127_95310_0 acyl-CoA dehydrogenase - - - 1.071e-202 635.0
DYD3_k127_95310_1 PFAM Starch synthase catalytic domain K00703 - 2.4.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001573 459.0
DYD3_k127_95310_2 PFAM Peptidase, membrane zinc metallopeptidase K06973 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 295.0
DYD3_k127_95310_3 PFAM Uncharacterised protein family (UPF0104) K07027 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000203 288.0
DYD3_k127_95310_4 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004489 273.0
DYD3_k127_95310_5 Putative restriction endonuclease - - - 0.00000003488 55.0
DYD3_k127_95310_6 Domain of unknown function (DUF4270) - - - 0.00001366 57.0
DYD3_k127_963330_0 TonB dependent receptor - - - 0.0 1225.0
DYD3_k127_963330_1 Belongs to the cysteine synthase cystathionine beta- synthase family K12339 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007548 471.0
DYD3_k127_963330_2 SusD family K21572 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003873 404.0
DYD3_k127_963330_3 serine acetyltransferase K00640 - 2.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005871 350.0
DYD3_k127_963330_4 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008368 280.0
DYD3_k127_963330_5 PFAM Glycosyl Hydrolase Family 88 - - - 0.00000000000000002526 82.0
DYD3_k127_963330_6 Domain of unknown function (DUF4843) - - - 0.00000000000000008517 87.0
DYD3_k127_992154_0 Amidohydrolase family - - - 2.832e-249 780.0
DYD3_k127_992154_1 COGs COG1368 Phosphoglycerol transferase and related protein alkaline phosphatase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001711 439.0
DYD3_k127_992154_2 with different specificities (related to short-chain alcohol - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006357 319.0
DYD3_k127_992154_3 - - - - 0.0000000000000001753 83.0
DYD3_k127_992797_0 Oxidoreductase - - - 3.998e-238 744.0
DYD3_k127_992797_1 Pirin C-terminal cupin domain K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003929 514.0
DYD3_k127_992797_2 Xylose isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003095 283.0
DYD3_k127_992797_3 COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL CutL homologs K07303 - 1.3.99.16 0.000000000000000000000000000000000000000000000000000000000000000001005 233.0
DYD3_k127_992797_4 RF-1 domain K15034 - - 0.00000000000000000000001056 106.0
DYD3_k127_994188_0 CarboxypepD_reg-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001809 341.0
DYD3_k127_994188_1 Acyltransferase - - - 0.00000000000000000000000000000000000000000000000000000007896 200.0
DYD3_k127_994188_2 Outer membrane protein beta-barrel domain - - - 0.00000000000000000000000000000000000000000000000000007496 193.0
DYD3_k127_994188_3 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 0.0000000000000000000000000000000003396 132.0