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Overview

ID MAG00983
Name DYD3_bin.62
Sample SMP0027
Taxonomy
Kingdom Bacteria
Phylum Gemmatimonadota
Class Gemmatimonadetes
Order Gemmatimonadales
Family GWC2-71-9
Genus SZUA-320
Species
Assembly information
Completeness (%) 97.53
Contamination (%) 1.01
GC content (%) 69.0
N50 (bp) 23,838
Genome size (bp) 3,737,049

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes3187

Gene name Description KEGG GOs EC E-value Score Sequence
DYD3_k127_1082255_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 8.932e-240 756.0
DYD3_k127_1082255_1 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 2.011e-216 689.0
DYD3_k127_1082255_10 ABC transporter K09812 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006251 271.0
DYD3_k127_1082255_11 Part of the ABC transporter FtsEX involved in K09811 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002696 255.0
DYD3_k127_1082255_12 Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000001341 256.0
DYD3_k127_1082255_13 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000002981 228.0
DYD3_k127_1082255_14 diguanylate cyclase K02488 - 2.7.7.65 0.00000000000000000000000000000000000000000000000000000003067 215.0
DYD3_k127_1082255_15 Penicillin amidase K07116 - 3.5.1.97 0.000000000000000000000000000000000000000000000000001396 187.0
DYD3_k127_1082255_16 Histidine kinase HAMP - - - 0.00000000000000000000000000000000000000008215 171.0
DYD3_k127_1082255_17 Tricorn protease homolog K03797,K08676 - 3.4.21.102 0.0000000000000000000006792 111.0
DYD3_k127_1082255_18 - - - - 0.000000000000000000009358 99.0
DYD3_k127_1082255_2 Cys/Met metabolism PLP-dependent enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008794 443.0
DYD3_k127_1082255_3 Metal dependent phosphohydrolases with conserved 'HD' motif. K06885 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003187 451.0
DYD3_k127_1082255_4 response regulator K07714 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008948 397.0
DYD3_k127_1082255_5 ROK family K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 391.0
DYD3_k127_1082255_6 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002666 340.0
DYD3_k127_1082255_7 Histidine kinase-like ATPases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001778 338.0
DYD3_k127_1082255_8 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 305.0
DYD3_k127_1082255_9 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002964 276.0
DYD3_k127_1082548_0 Outer membrane protein beta-barrel family - - - 0.0 1050.0
DYD3_k127_1082548_1 Pfam:SusD K21572 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007112 342.0
DYD3_k127_1082548_2 Alpha beta hydrolase K00433 - 1.11.1.10 0.0000000000000000000000007159 116.0
DYD3_k127_1090023_0 DALR_2 K01883 - 6.1.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 482.0
DYD3_k127_1090023_1 mechanosensitive ion channel K22044 - - 0.000000000000000000000000000000000000000000000000000000000000000000003804 245.0
DYD3_k127_1090023_2 Thioredoxin-like domain K03672 - 1.8.1.8 0.000000000000000000000000000000000000000007163 163.0
DYD3_k127_1090023_3 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.00000000000002745 76.0
DYD3_k127_1090023_4 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.000000000000101 70.0
DYD3_k127_1090023_5 - - - - 0.0000000815 54.0
DYD3_k127_1090210_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 2.919e-282 882.0
DYD3_k127_1090210_1 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000006991 242.0
DYD3_k127_1090210_2 domain protein K13735 - - 0.00000000000000000000000000000000000000000000000000000000000008543 230.0
DYD3_k127_1090210_3 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.0000000000000000000000000000000000000000000000000000000000001149 214.0
DYD3_k127_1090210_4 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.000000000000101 70.0
DYD3_k127_1135442_0 TonB dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000025 317.0
DYD3_k127_1135442_1 Protein of unknown function (DUF4199) - - - 0.0000000000000000000000000000000000000000000000000000001984 200.0
DYD3_k127_1135442_2 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000009045 179.0
DYD3_k127_1135442_3 - - - - 0.0000924 48.0
DYD3_k127_1224166_0 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005861 547.0
DYD3_k127_1224166_1 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004693 438.0
DYD3_k127_1224166_2 Protein of unknown function DUF58 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003405 257.0
DYD3_k127_1224166_3 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.000000000000000000000000000000000000000000000000000000000000036 219.0
DYD3_k127_1224166_4 S4 RNA-binding domain K06178 - 5.4.99.22 0.00000000000000000000000000000000000000000000000000000000001222 222.0
DYD3_k127_1224166_5 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.0000000000000000000000000000427 126.0
DYD3_k127_1224166_6 Zinc finger domain - - - 0.0000000000000000002673 99.0
DYD3_k127_1224166_7 Binds directly to 16S ribosomal RNA K02968 - - 0.00000000008938 66.0
DYD3_k127_1249964_0 Aminotransferase class-III K01845 - 5.4.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006283 533.0
DYD3_k127_1249964_1 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 415.0
DYD3_k127_1249964_2 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002767 411.0
DYD3_k127_1249964_3 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005372 388.0
DYD3_k127_1249964_4 Delta-aminolevulinic acid dehydratase K01698 - 4.2.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000341 376.0
DYD3_k127_1249964_5 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000008174 250.0
DYD3_k127_1249964_6 peroxidase activity K09162 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0008150,GO:0008152,GO:0016491,GO:0016701,GO:0016702,GO:0042597,GO:0044464,GO:0050587,GO:0051213,GO:0055114 1.13.11.49 0.00000000000000000000000000000000000000000009635 169.0
DYD3_k127_1249964_7 Tetrapyrrole (Corrin/Porphyrin) Methylases K01719,K01749,K02303,K13542,K13543 GO:0003674,GO:0003824,GO:0004851,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008757,GO:0009058,GO:0009987,GO:0016740,GO:0016741,GO:0018130,GO:0019354,GO:0019438,GO:0032259,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046156,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.107,2.5.1.61,4.2.1.75 0.000000000000000000000000000000000002377 157.0
DYD3_k127_1257822_0 GMC oxidoreductase - - - 4.375e-235 744.0
DYD3_k127_1257822_1 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000003301 187.0
DYD3_k127_1257822_2 (twin-arginine translocation) pathway signal - - - 0.0000000000000000000000008001 111.0
DYD3_k127_1257822_3 cAMP biosynthetic process K08884,K12132 - 2.7.11.1 0.0000000001495 74.0
DYD3_k127_1269171_0 D-aminopeptidase K16203 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003141 330.0
DYD3_k127_1269171_1 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003566 263.0
DYD3_k127_1269171_2 Endoribonuclease L-PSP - - - 0.000000000000000000000000000000000000000000000000001503 193.0
DYD3_k127_1269171_3 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000001333 167.0
DYD3_k127_1270838_0 esterase - - - 4.863e-265 826.0
DYD3_k127_1270838_1 Serine carboxypeptidase - - - 3.296e-221 696.0
DYD3_k127_1270838_10 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003741 430.0
DYD3_k127_1270838_11 NAD(P)H-dependent FMN reductase K19784 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000158 288.0
DYD3_k127_1270838_12 SMP-30/Gluconolaconase/LRE-like region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004128 276.0
DYD3_k127_1270838_13 radical SAM domain protein K04070 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000003163 239.0
DYD3_k127_1270838_14 radical SAM domain protein K04070 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000001103 231.0
DYD3_k127_1270838_15 - - - - 0.000000000000000000000000000000000000000000000001659 186.0
DYD3_k127_1270838_16 Amidase K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000004415 182.0
DYD3_k127_1270838_17 Copper amine oxidase N-terminal domain - - - 0.0000000000000000000000000000000000000000000001267 181.0
DYD3_k127_1270838_18 Protein of unknown function (DUF1460) - - - 0.0000000000000000000000000000000000000000000001776 181.0
DYD3_k127_1270838_19 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000215 158.0
DYD3_k127_1270838_2 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005571 604.0
DYD3_k127_1270838_20 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins - - - 0.0000000000000000000000000002894 123.0
DYD3_k127_1270838_21 Amidase - - - 0.000000000000000000000009884 110.0
DYD3_k127_1270838_22 D-aminopeptidase K16203 - - 0.00000000000000000000746 106.0
DYD3_k127_1270838_23 Acetyltransferase (GNAT) domain - - - 0.000000005624 61.0
DYD3_k127_1270838_24 Leucyl aminopeptidase (Aminopeptidase t) - - - 0.00000007535 64.0
DYD3_k127_1270838_25 Amidase - - - 0.0002091 52.0
DYD3_k127_1270838_3 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 602.0
DYD3_k127_1270838_4 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006054 565.0
DYD3_k127_1270838_5 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001293 547.0
DYD3_k127_1270838_6 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 496.0
DYD3_k127_1270838_7 Amidohydrolase family K06015 - 3.5.1.81 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009198 454.0
DYD3_k127_1270838_8 Transglycosylase K05365,K05366 - 2.4.1.129,3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 440.0
DYD3_k127_1270838_9 COGs COG1680 Beta-lactamase class C and other penicillin binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001718 419.0
DYD3_k127_1275242_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007262 468.0
DYD3_k127_1275242_1 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000494 383.0
DYD3_k127_1275242_2 Biotin-lipoyl like K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005094 372.0
DYD3_k127_1275242_3 membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005551 346.0
DYD3_k127_1275242_4 Outer membrane efflux protein K12340 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004824 282.0
DYD3_k127_1275242_5 creatininase K01470,K22232 - 3.5.2.10 0.000000000000000000000000000000000000009457 152.0
DYD3_k127_1275242_6 MacB-like periplasmic core domain K02004 - - 0.000000000002124 77.0
DYD3_k127_1277699_0 Aminotransferase class-III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004861 520.0
DYD3_k127_1277699_1 Putative serine dehydratase domain - - - 0.0000000000000000000000000000002799 129.0
DYD3_k127_1305545_0 Ketoacyl-synthetase C-terminal extension - - - 2.49e-248 819.0
DYD3_k127_1305545_1 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000008552 183.0
DYD3_k127_1305545_2 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000003654 177.0
DYD3_k127_1305545_3 Glycosyl transferase - - - 0.0000000000000001511 83.0
DYD3_k127_1342611_0 Copper amine oxidase, N2 domain K00276 - 1.4.3.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002365 597.0
DYD3_k127_1342611_1 protein kinase activity K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002766 400.0
DYD3_k127_1342611_2 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000014 169.0
DYD3_k127_1342611_3 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter - - - 0.000000000000000000000000000000000000004447 148.0
DYD3_k127_1342611_4 Transcription elongation factor, N-terminal K03624 - - 0.00000000000000000000000000000000000023 145.0
DYD3_k127_1349112_0 Elongation factor SelB, winged helix K03833 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004587 303.0
DYD3_k127_1349112_1 PFAM plasmid stabilization system K06218 - - 0.0000000000000000001074 91.0
DYD3_k127_1349112_2 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000000126 80.0
DYD3_k127_1349112_3 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.000001267 53.0
DYD3_k127_1404030_0 cellulose binding - - - 0.0 1040.0
DYD3_k127_1404030_1 YHS domain K01533 - 3.6.3.4 2.036e-320 992.0
DYD3_k127_1404030_10 SnoaL-like domain - - - 0.000000000000000000000000000000001334 136.0
DYD3_k127_1404030_11 Cytochrome C' - - - 0.00000000000000000000000000005172 124.0
DYD3_k127_1404030_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 337.0
DYD3_k127_1404030_3 copper resistance - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 333.0
DYD3_k127_1404030_4 NnrU protein K21310 - 2.1.1.334 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005608 314.0
DYD3_k127_1404030_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001023 290.0
DYD3_k127_1404030_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001937 282.0
DYD3_k127_1404030_7 - - - - 0.00000000000000000000000000000000000000009282 165.0
DYD3_k127_1404030_8 - - - - 0.0000000000000000000000000000000000000005972 164.0
DYD3_k127_1404030_9 - - - - 0.0000000000000000000000000000000000003598 150.0
DYD3_k127_1417237_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006763 527.0
DYD3_k127_1417237_1 Bacterial Ig-like domain - - - 0.000000000000000000000000000000000000000000000000007439 197.0
DYD3_k127_1419429_0 ATP dependent DNA ligase C terminal region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001605 520.0
DYD3_k127_1419429_1 ATP dependent DNA ligase domain protein K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 306.0
DYD3_k127_1419429_2 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567,K10778 - 2.1.1.63 0.00000000000000000000000000000000000000000002973 169.0
DYD3_k127_1419429_3 Phosphoenolpyruvate phosphomutase - - - 0.000000000000000000000003871 108.0
DYD3_k127_1448470_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 6.347e-279 890.0
DYD3_k127_1448470_1 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 6.042e-269 846.0
DYD3_k127_1448470_10 PFAM V-type ATPase 116 kDa K02123 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001241 319.0
DYD3_k127_1448470_11 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008799 289.0
DYD3_k127_1448470_12 PFAM Uncharacterised ACR, YagE family COG1723 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001531 276.0
DYD3_k127_1448470_13 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000004334 269.0
DYD3_k127_1448470_14 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000000000000000000000000000001238 229.0
DYD3_k127_1448470_15 Thiolase, C-terminal domain K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000001162 212.0
DYD3_k127_1448470_16 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000000000000000000000015 169.0
DYD3_k127_1448470_17 Phosphate acyltransferases K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000008337 180.0
DYD3_k127_1448470_18 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000002736 154.0
DYD3_k127_1448470_19 ribose 5-phosphate isomerase B K01808 - 5.3.1.6 0.00000000000000000000000000000000002195 139.0
DYD3_k127_1448470_2 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 610.0
DYD3_k127_1448470_20 - - - - 0.00000000000000000000000000000001357 140.0
DYD3_k127_1448470_21 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000002515 133.0
DYD3_k127_1448470_22 ACT domain - - - 0.0000000000000000000000000000685 121.0
DYD3_k127_1448470_23 - - - - 0.0000000000000000000000005454 113.0
DYD3_k127_1448470_24 - - - - 0.000000000000000000000005506 111.0
DYD3_k127_1448470_25 CAAX protease self-immunity K07052 - - 0.000000000000000000002386 105.0
DYD3_k127_1448470_26 - - - - 0.000000000000000006244 93.0
DYD3_k127_1448470_27 Produces ATP from ADP in the presence of a proton gradient across the membrane K02120 - - 0.0000000000000001095 92.0
DYD3_k127_1448470_28 Ribosomal protein S21 K02970 - - 0.0000000000001318 72.0
DYD3_k127_1448470_29 ATP hydrolysis coupled proton transport K02110,K02124 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0000000000003643 83.0
DYD3_k127_1448470_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit K02117 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008324,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0034220,GO:0036442,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044464,GO:0044769,GO:0046961,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132,GO:1902600 3.6.3.14,3.6.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 571.0
DYD3_k127_1448470_30 Archease protein family (MTH1598/TM1083) - - - 0.0000000000005376 74.0
DYD3_k127_1448470_31 Septum formation initiator K05589 - - 0.00000009159 60.0
DYD3_k127_1448470_4 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000356 522.0
DYD3_k127_1448470_5 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001956 512.0
DYD3_k127_1448470_6 Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit K02118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 505.0
DYD3_k127_1448470_7 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00263 - 1.4.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000153 481.0
DYD3_k127_1448470_8 alpha amylase catalytic K01182,K05343 - 3.2.1.1,3.2.1.10,5.4.99.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001831 466.0
DYD3_k127_1448470_9 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004827 399.0
DYD3_k127_1452280_0 Alpha-amylase domain K05343 - 3.2.1.1,5.4.99.16 7.173e-303 957.0
DYD3_k127_1452280_1 hydrolase activity, hydrolyzing O-glycosyl compounds K16147 - 2.4.99.16 1.873e-262 824.0
DYD3_k127_1452280_10 - - - - 0.000000000000000004096 89.0
DYD3_k127_1452280_11 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000003398 79.0
DYD3_k127_1452280_12 Belongs to the universal stress protein A family - - - 0.0000000000005735 79.0
DYD3_k127_1452280_13 endoribonuclease L-PSP - - - 0.00000000003232 72.0
DYD3_k127_1452280_2 SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 543.0
DYD3_k127_1452280_3 nitrite reductase [NAD(P)H] activity K00158,K00363,K03809,K05710 - 1.2.3.3,1.6.5.2,1.7.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 488.0
DYD3_k127_1452280_4 ATP dependent DNA ligase domain K01971 - 6.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002176 381.0
DYD3_k127_1452280_5 ErfK YbiS YcfS YnhG family protein K21470 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 382.0
DYD3_k127_1452280_6 DNA polymerase Ligase (LigD) - - - 0.00000000000000000000000000000000000000000000000000000000000000000003292 242.0
DYD3_k127_1452280_7 Bacterial protein of unknown function (DUF882) - - - 0.000000000000000000000000000000000000000000000000006491 192.0
DYD3_k127_1452280_8 Transport and Golgi organisation 2 - - - 0.000000000000000000000000000007392 127.0
DYD3_k127_1452280_9 Protein of unknown function (DUF3175) - - - 0.00000000000000000000000002647 126.0
DYD3_k127_1458212_0 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 3.047e-248 775.0
DYD3_k127_1458212_1 acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 477.0
DYD3_k127_1458212_10 Short-chain dehydrogenase reductase SDR - - - 0.000000000000000000000000000000000000000000000000000001421 199.0
DYD3_k127_1458212_11 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.00000000000000000000000000000000000000000000000000000145 205.0
DYD3_k127_1458212_12 Ribosomal protein S9/S16 K02996 - - 0.000000000000000000000000000000000000000000000000005909 191.0
DYD3_k127_1458212_13 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.000000000000000000000000000000000000000000001735 175.0
DYD3_k127_1458212_14 Cytidylyltransferase family K00981 - 2.7.7.41 0.000000000000000000000000000000000000000000001995 175.0
DYD3_k127_1458212_15 - - - - 0.0000000000000000000000000000000007559 134.0
DYD3_k127_1458212_16 Biotin-requiring enzyme - - - 0.0000000000000000000000000000938 123.0
DYD3_k127_1458212_17 HEAT repeats - - - 0.0008513 51.0
DYD3_k127_1458212_2 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000223 362.0
DYD3_k127_1458212_3 Ribosomal protein S2 K02967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002865 351.0
DYD3_k127_1458212_4 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007283 304.0
DYD3_k127_1458212_5 PFAM Glyoxalase bleomycin resistance protein dioxygenase K07104 - 1.13.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000001979 256.0
DYD3_k127_1458212_6 PFAM SMP-30 Gluconolaconase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001777 257.0
DYD3_k127_1458212_7 tRNA (Uracil-5-)-methyltransferase K03215 - 2.1.1.190 0.00000000000000000000000000000000000000000000000000000000000000008372 241.0
DYD3_k127_1458212_8 Peptidase family M50 K11749 - - 0.00000000000000000000000000000000000000000000000000000000000005829 234.0
DYD3_k127_1458212_9 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.0000000000000000000000000000000000000000000000000000000286 203.0
DYD3_k127_1472353_0 prohibitin homologues - - - 0.00000000000000000000000000000000000000000000000000000000000000002655 229.0
DYD3_k127_1472353_1 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.00000000000003046 86.0
DYD3_k127_1594178_0 Group II intron, maturase-specific domain K00986 - 2.7.7.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009125 530.0
DYD3_k127_1594178_1 Membrane protease subunits, stomatin prohibitin homologs - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000004086 93.0
DYD3_k127_1594178_2 Membrane protease subunits, stomatin prohibitin homologs - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000006194 77.0
DYD3_k127_160362_0 GMC oxidoreductase - - - 1.499e-254 796.0
DYD3_k127_1631079_0 mechanosensitive ion channel K22044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003163 376.0
DYD3_k127_1631079_1 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001427 271.0
DYD3_k127_1631079_2 - - - - 0.0000000000000000000000000000000000000001905 155.0
DYD3_k127_1631079_3 SnoaL-like domain - - - 0.0000000000000000000000000004656 118.0
DYD3_k127_1648976_0 efflux transmembrane transporter activity - - - 6.203e-309 972.0
DYD3_k127_1648976_1 Amidohydrolase family - - - 5.639e-209 658.0
DYD3_k127_1648976_10 Peptidase family S41 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008452 359.0
DYD3_k127_1648976_11 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004 350.0
DYD3_k127_1648976_12 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002373 310.0
DYD3_k127_1648976_13 resolution of meiotic recombination intermediates - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001313 302.0
DYD3_k127_1648976_14 Tetratricopeptide repeat K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000863 285.0
DYD3_k127_1648976_15 Tetratricopeptide repeats K08282,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000008061 267.0
DYD3_k127_1648976_16 Transcriptional regulator K07979 - - 0.00000000000000000000000000000000000000000000000000000001969 209.0
DYD3_k127_1648976_17 DNA-templated transcription, initiation K02405 - - 0.000000000000000000000000000000000000000000000000000001019 201.0
DYD3_k127_1648976_18 Erythromycin esterase K06880 - - 0.0000000000000000000000000000000000000000000000000008411 206.0
DYD3_k127_1648976_19 - - - - 0.0000000000000000000000000000000000000000000000000985 186.0
DYD3_k127_1648976_2 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004271 622.0
DYD3_k127_1648976_21 RibD C-terminal domain - - - 0.000000000000000000000000000000000000000000001273 169.0
DYD3_k127_1648976_22 3-hydroxyanthranilate 3,4-dioxygenase activity - - - 0.0000000000000000000000000000000000000000002601 168.0
DYD3_k127_1648976_23 negative regulation of transcription, DNA-templated - - - 0.000000000000000000000000000000000000004447 148.0
DYD3_k127_1648976_24 - - - - 0.000000000000000000000000000000001612 136.0
DYD3_k127_1648976_25 peroxiredoxin activity K03386,K03564,K16922 - 1.11.1.15 0.00000000000000000000000000000002829 128.0
DYD3_k127_1648976_27 - - - - 0.00000000000000000000000000006526 124.0
DYD3_k127_1648976_28 Gram-negative bacterial TonB protein C-terminal - - - 0.0000000000000000000000009281 118.0
DYD3_k127_1648976_29 peptidyl-tyrosine sulfation - - - 0.000000000000000000000004675 109.0
DYD3_k127_1648976_3 PFAM glycoside hydrolase 15-related - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003729 474.0
DYD3_k127_1648976_30 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000002022 106.0
DYD3_k127_1648976_31 - - - - 0.000000000000000000001115 103.0
DYD3_k127_1648976_32 DinB family - - - 0.000000000000000000002289 102.0
DYD3_k127_1648976_33 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000001117 108.0
DYD3_k127_1648976_34 - - - - 0.000000000000000001104 91.0
DYD3_k127_1648976_35 - - - - 0.0000000000002963 77.0
DYD3_k127_1648976_36 A domain in the BMP inhibitor chordin and in microbial proteins. - - - 0.000000000001244 76.0
DYD3_k127_1648976_37 peroxiredoxin activity K03386,K03564,K16922 - 1.11.1.15 0.000000000003279 70.0
DYD3_k127_1648976_38 - - - - 0.0000000000318 67.0
DYD3_k127_1648976_39 - - - - 0.000000008654 65.0
DYD3_k127_1648976_4 ABC transporter K01990,K09695 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003933 448.0
DYD3_k127_1648976_41 - - - - 0.000007568 55.0
DYD3_k127_1648976_42 Transmembrane anti-sigma factor - - - 0.0001491 49.0
DYD3_k127_1648976_43 Membrane - - - 0.0002622 52.0
DYD3_k127_1648976_44 PFAM Ig domain protein, group 2 domain protein - - - 0.0003366 51.0
DYD3_k127_1648976_5 protein kinase activity K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009692 465.0
DYD3_k127_1648976_6 transport, permease protein K01992,K18233 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008071 405.0
DYD3_k127_1648976_7 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 410.0
DYD3_k127_1648976_8 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005101 413.0
DYD3_k127_1648976_9 Belongs to the thiolase family K00626,K00632 - 2.3.1.16,2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001902 381.0
DYD3_k127_1812745_0 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 2.886e-198 652.0
DYD3_k127_1812745_1 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003967 481.0
DYD3_k127_1812745_2 Nucleotidyl transferase K00971 - 2.7.7.13 0.000000000000000000000000000175 123.0
DYD3_k127_1812745_3 - - - - 0.0000000000000000006433 93.0
DYD3_k127_1812745_4 PFAM Roadblock LC7 family protein K07131 - - 0.0000002099 59.0
DYD3_k127_1881649_0 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003444 415.0
DYD3_k127_1881649_1 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005077 359.0
DYD3_k127_1881649_10 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000007665 148.0
DYD3_k127_1881649_11 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.00000000000000000000000000000000004412 138.0
DYD3_k127_1881649_12 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0008150,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000005295 131.0
DYD3_k127_1881649_13 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.00000000000000000000000000001032 124.0
DYD3_k127_1881649_14 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.000000000000000000004145 95.0
DYD3_k127_1881649_15 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.00000000000000000002467 96.0
DYD3_k127_1881649_16 GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.000000000000000952 76.0
DYD3_k127_1881649_17 Ribosomal L29 protein K02904 - - 0.000000000001704 75.0
DYD3_k127_1881649_18 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.000000000005037 67.0
DYD3_k127_1881649_19 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.0004317 43.0
DYD3_k127_1881649_2 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008109 261.0
DYD3_k127_1881649_3 Forms part of the polypeptide exit tunnel K02926 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001098 254.0
DYD3_k127_1881649_4 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.00000000000000000000000000000000000000000000000000000000000000006668 226.0
DYD3_k127_1881649_5 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.0000000000000000000000000000000000000000000000000000000000000001926 231.0
DYD3_k127_1881649_6 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000002757 209.0
DYD3_k127_1881649_7 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.0000000000000000000000000000000000000000000000000000000001226 211.0
DYD3_k127_1881649_8 Involved in the binding of tRNA to the ribosomes K02946 - - 0.00000000000000000000000000000000000000000000001171 174.0
DYD3_k127_1881649_9 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.000000000000000000000000000000000000001572 149.0
DYD3_k127_1887492_0 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 1.934e-232 738.0
DYD3_k127_1887492_1 DNA-directed DNA polymerase K02337,K14162 - 2.7.7.7 7.031e-232 754.0
DYD3_k127_1887492_10 impB/mucB/samB family K02346 - 2.7.7.7 0.00000000000000000000000000000000000000000000000002243 195.0
DYD3_k127_1887492_11 Cold shock protein domain K03704 - - 0.000000000000000000000000000000000001875 138.0
DYD3_k127_1887492_12 glyoxalase III activity - - - 0.000000000000014 87.0
DYD3_k127_1887492_13 amine dehydrogenase activity - - - 0.0000000000001131 83.0
DYD3_k127_1887492_14 PAS modulated sigma54 specific transcriptional regulator, Fis family - - - 0.000003869 56.0
DYD3_k127_1887492_15 Protein conserved in bacteria - - - 0.00001708 52.0
DYD3_k127_1887492_16 Transcriptional regulator K02167 - - 0.0001133 51.0
DYD3_k127_1887492_17 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0002839 44.0
DYD3_k127_1887492_2 LytB protein K03527 - 1.17.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000329 475.0
DYD3_k127_1887492_3 alcohol dehydrogenase K00008 - 1.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002815 423.0
DYD3_k127_1887492_4 Serine/Threonine protein kinases, catalytic domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005432 415.0
DYD3_k127_1887492_5 pyrroloquinoline quinone binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 359.0
DYD3_k127_1887492_6 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004905 352.0
DYD3_k127_1887492_7 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 293.0
DYD3_k127_1887492_8 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002864 268.0
DYD3_k127_1887492_9 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000001272 204.0
DYD3_k127_1932800_0 Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX K03405 - 6.6.1.1 9.706e-198 633.0
DYD3_k127_1932800_1 Aminotransferase class-V - - - 2.669e-195 617.0
DYD3_k127_1932800_10 - - - - 0.000000000000000000000000000000000003821 150.0
DYD3_k127_1932800_11 Belongs to the GcvT family K06980 - - 0.0000000000000000000000000000000127 143.0
DYD3_k127_1932800_12 Cytidylate kinase-like family - - - 0.000000000000000000000000001109 128.0
DYD3_k127_1932800_14 PFAM Integrase catalytic region K07497 - - 0.0000000000000000001469 96.0
DYD3_k127_1932800_15 self proteolysis - - - 0.0000000000000000002335 102.0
DYD3_k127_1932800_16 HicB_like antitoxin of bacterial toxin-antitoxin system - - - 0.0000000000000006396 88.0
DYD3_k127_1932800_17 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000007891 81.0
DYD3_k127_1932800_18 Transposase K07483 - - 0.000001573 57.0
DYD3_k127_1932800_2 von Willebrand factor (vWF) type A domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006151 576.0
DYD3_k127_1932800_3 domain, Protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 504.0
DYD3_k127_1932800_4 PFAM Calcineurin-like phosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004823 477.0
DYD3_k127_1932800_5 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000308 437.0
DYD3_k127_1932800_6 lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 336.0
DYD3_k127_1932800_7 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000342 286.0
DYD3_k127_1932800_8 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001261 260.0
DYD3_k127_1932800_9 4Fe-4S binding domain K11473 - - 0.00000000000000000000000000000000000000000000000000000000000000007668 230.0
DYD3_k127_1932984_0 Domain of unknown function (DUF4160) - - - 0.0000000000000000000000000000001704 125.0
DYD3_k127_1932984_1 self proteolysis - - - 0.000000000000000000000004135 113.0
DYD3_k127_1932984_2 Protein of unknown function (DUF2442) - - - 0.00000000000000000002763 95.0
DYD3_k127_1932984_3 self proteolysis - - - 0.000000000000000961 86.0
DYD3_k127_1932984_4 HicA toxin of bacterial toxin-antitoxin, - - - 0.00000000001007 72.0
DYD3_k127_1932984_5 - - - - 0.00000000002788 70.0
DYD3_k127_1932984_6 iron dependent repressor - - - 0.000001973 53.0
DYD3_k127_1932984_7 self proteolysis - - - 0.000003592 52.0
DYD3_k127_1936283_0 TonB dependent receptor K21573 - - 1.166e-316 1000.0
DYD3_k127_1936283_1 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K21572 - - 9.435e-204 646.0
DYD3_k127_1936283_2 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006081 389.0
DYD3_k127_1936283_3 Alpha amylase, catalytic domain K16147 - 2.4.99.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006908 325.0
DYD3_k127_1956785_0 Carbohydrate family 9 binding domain-like - - - 9.426e-314 981.0
DYD3_k127_1956785_1 cAMP biosynthetic process K08282,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 578.0
DYD3_k127_1956785_10 - - - - 0.0000000000000000000000001228 114.0
DYD3_k127_1956785_11 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000003352 106.0
DYD3_k127_1956785_12 DinB family - - - 0.00000000000000000000002878 111.0
DYD3_k127_1956785_13 D-alanyl-D-alanine carboxypeptidase K07259 - 3.4.16.4 0.0000000003704 72.0
DYD3_k127_1956785_2 Dehydrogenase K00248,K09478 - 1.3.8.1,1.3.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007616 516.0
DYD3_k127_1956785_3 Aminotransferase class I and II K10907 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000147 476.0
DYD3_k127_1956785_4 Peptidase dimerisation domain K01439,K13049 - 3.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001595 475.0
DYD3_k127_1956785_5 Prephenate dehydrogenase chorismate mutase K00210 - 1.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000982 427.0
DYD3_k127_1956785_6 Protein kinase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000042 355.0
DYD3_k127_1956785_7 Periplasmic binding protein K02016 - - 0.0000000000000000000000000000000000000000000000000000000000002322 222.0
DYD3_k127_1956785_8 MOSC domain - - - 0.000000000000000000000000000000000000000000000000000002041 203.0
DYD3_k127_1956785_9 Protein of unknown function (DUF1572) - - - 0.0000000000000000000000000000000000000007471 153.0
DYD3_k127_1971419_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 9.4e-322 1015.0
DYD3_k127_1971419_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 2.882e-262 822.0
DYD3_k127_1971419_10 Small GTP-binding protein K06883 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005281 281.0
DYD3_k127_1971419_11 Pfam:PNPOx_C K00275 - 1.4.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000006069 243.0
DYD3_k127_1971419_12 Phosphoribosyl transferase domain K00760 - 2.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000003884 237.0
DYD3_k127_1971419_13 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000007266 238.0
DYD3_k127_1971419_14 Bacterial dnaA protein K02313 - - 0.00000000000000000000000000000000000000000000000000000000000000001117 249.0
DYD3_k127_1971419_15 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.00000000000000000000000000000000000000000000000000000008049 203.0
DYD3_k127_1971419_16 cheY-homologous receiver domain K03413 - - 0.0000000000000000000000000000000000000000000000000000002188 199.0
DYD3_k127_1971419_17 CheC-like family K03410 - - 0.0000000000000000000000000000000000000000000000000000005575 208.0
DYD3_k127_1971419_18 protein-glutamate O-methyltransferase activity K00575 - 2.1.1.80 0.00000000000000000000000000000000000000000000000000001566 201.0
DYD3_k127_1971419_19 histidine-tRNA ligase activity K01892,K02502 - 6.1.1.21 0.000000000000000000000000000000000000000000000000008206 192.0
DYD3_k127_1971419_2 Dipeptidyl peptidase IV (DPP IV) N-terminal region - - - 3.867e-256 813.0
DYD3_k127_1971419_20 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.0000000000000000000000000000000000000000000000003324 193.0
DYD3_k127_1971419_21 Prokaryotic dksA/traR C4-type zinc finger - - - 0.0000000000000000000000000000000000000000000000006414 199.0
DYD3_k127_1971419_22 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000000000000000000000000000000000002032 162.0
DYD3_k127_1971419_23 Domain of unknown function (DUF4388) - - - 0.000000000000000000000000000000096 141.0
DYD3_k127_1971419_24 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.0000000000000000000000000008178 123.0
DYD3_k127_1971419_25 CheW domain protein - - - 0.00000000953 64.0
DYD3_k127_1971419_26 DivIVA domain K04074 - - 0.00000001018 67.0
DYD3_k127_1971419_27 chaperone-mediated protein folding K20543 - - 0.0000004091 61.0
DYD3_k127_1971419_28 Roadblock/LC7 domain - - - 0.000002298 56.0
DYD3_k127_1971419_3 Fumarylacetoacetate (FAA) hydrolase K01555 - 3.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001778 570.0
DYD3_k127_1971419_4 Domain of unknown function (DUF4388) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000781 430.0
DYD3_k127_1971419_5 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004798 374.0
DYD3_k127_1971419_6 secondary active sulfate transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 336.0
DYD3_k127_1971419_7 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001863 308.0
DYD3_k127_1971419_8 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001245 293.0
DYD3_k127_1971419_9 Signal transducing histidine kinase homodimeric K03407 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006162 295.0
DYD3_k127_1973059_0 TonB dependent receptor - - - 2.439e-241 776.0
DYD3_k127_1973059_1 methylmalonate-semialdehyde dehydrogenase K00140 - 1.2.1.18,1.2.1.27 2.061e-210 664.0
DYD3_k127_1973059_2 Type II secretion system (T2SS), protein E, N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003892 484.0
DYD3_k127_1973059_3 domain, Protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003559 446.0
DYD3_k127_1973059_4 O-acyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001399 361.0
DYD3_k127_1973059_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002962 296.0
DYD3_k127_1973059_6 NUDIX domain K08310 - 3.6.1.67 0.0000000000000000000000000000000000007396 146.0
DYD3_k127_1973059_7 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.0000000000000000000000000000000002137 139.0
DYD3_k127_1973059_8 - - - - 0.000000000000000000000000000002808 130.0
DYD3_k127_1986629_0 Uncharacterized protein family (UPF0051) K09014 - - 3.964e-255 794.0
DYD3_k127_1986629_1 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004116 463.0
DYD3_k127_1986629_10 - - - - 0.00000000000000004851 89.0
DYD3_k127_1986629_11 Putative Flp pilus-assembly TadE/G-like - - - 0.0000000000003844 82.0
DYD3_k127_1986629_12 TadE-like protein - - - 0.0000000007049 66.0
DYD3_k127_1986629_13 Ribbon-helix-helix protein, copG family - - - 0.0000002511 56.0
DYD3_k127_1986629_14 .,Oxidizes proline to glutamate for use as a carbon and nitrogen source - GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040008,GO:0044464,GO:0045927,GO:0048518,GO:0050789,GO:0065007,GO:0071944 - 0.0000008588 53.0
DYD3_k127_1986629_2 ABC transporter K09013 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002933 387.0
DYD3_k127_1986629_3 Uncharacterized protein family (UPF0051) K09015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004492 366.0
DYD3_k127_1986629_4 Calcineurin-like phosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002045 306.0
DYD3_k127_1986629_5 Belongs to the UPF0403 family - - - 0.00000000000000000000000000000000000000000000000001234 184.0
DYD3_k127_1986629_6 PIN domain K07064 GO:0008150,GO:0040008,GO:0045926,GO:0048519,GO:0050789,GO:0065007 - 0.000000000000000000000000000000000000001141 151.0
DYD3_k127_1986629_7 SUF system FeS assembly protein, NifU family K04488 - - 0.0000000000000000000000000000000000002735 162.0
DYD3_k127_1986629_8 ribonuclease activity - - - 0.000000000000000000000001154 112.0
DYD3_k127_1986629_9 WD40-like Beta Propeller - - - 0.00000000000000000000105 101.0
DYD3_k127_1994298_0 Participates in both transcription termination and antitermination K02600 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001636 606.0
DYD3_k127_1994298_1 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009909 554.0
DYD3_k127_1994298_10 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family - - - 0.0000000006407 67.0
DYD3_k127_1994298_11 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.00002301 49.0
DYD3_k127_1994298_2 Aminotransferase class-V - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006655 494.0
DYD3_k127_1994298_3 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004622 500.0
DYD3_k127_1994298_4 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 481.0
DYD3_k127_1994298_5 Zinc dependent phospholipase C - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000971 314.0
DYD3_k127_1994298_6 Multi-copper polyphenol oxidoreductase laccase K05810 - - 0.000000000000000000000000003293 120.0
DYD3_k127_1994298_7 Required for maturation of 30S ribosomal subunits K09748 - - 0.0000000000000000000692 96.0
DYD3_k127_1994298_8 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 0.0000000000000001567 81.0
DYD3_k127_1994298_9 Belongs to the peptidase S8 family - - - 0.0000000000008097 73.0
DYD3_k127_2002145_0 Dienelactone hydrolase family - - - 1.535e-229 726.0
DYD3_k127_2002145_1 nuclear chromosome segregation - - - 2.78e-222 734.0
DYD3_k127_2002145_10 tail specific protease K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004373 515.0
DYD3_k127_2002145_11 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004668 466.0
DYD3_k127_2002145_12 Belongs to the peptidase M50B family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002521 444.0
DYD3_k127_2002145_13 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002485 432.0
DYD3_k127_2002145_14 phosphosulfolactate synthase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000034 376.0
DYD3_k127_2002145_15 6-O-methylguanine DNA methyltransferase, DNA binding domain K10778 - 2.1.1.63 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008564 366.0
DYD3_k127_2002145_16 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004239 334.0
DYD3_k127_2002145_17 Aerotolerance regulator N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 339.0
DYD3_k127_2002145_18 Domain of Unknown Function (DUF1080) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006803 320.0
DYD3_k127_2002145_19 Protein of unknown function DUF58 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006659 317.0
DYD3_k127_2002145_2 Putative glutamine amidotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 622.0
DYD3_k127_2002145_20 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003663 304.0
DYD3_k127_2002145_21 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002077 278.0
DYD3_k127_2002145_22 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001991 263.0
DYD3_k127_2002145_23 Domain of unknown function (DUF4159) - - - 0.00000000000000000000000000000000000000000000000000000000000000000003319 257.0
DYD3_k127_2002145_24 protease with the C-terminal PDZ domain - - - 0.000000000000000000000000000000000000000000000000000000000000000001213 250.0
DYD3_k127_2002145_25 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000000000000000000000000000000000000004081 209.0
DYD3_k127_2002145_26 Peptidase C14 caspase catalytic subunit p20 - - - 0.000000000000000000000000000000000000000000007578 184.0
DYD3_k127_2002145_27 negative regulation of transcription, DNA-templated - - - 0.000000000000000000000000000000000003763 141.0
DYD3_k127_2002145_28 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.0000000000000000000000000000000000162 143.0
DYD3_k127_2002145_29 Endoribonuclease L-PSP K09022 - 3.5.99.10 0.0000000000000000000000000000000283 131.0
DYD3_k127_2002145_3 Gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003373 600.0
DYD3_k127_2002145_4 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 619.0
DYD3_k127_2002145_5 MmgE PrpD family protein K01720 - 4.2.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004649 574.0
DYD3_k127_2002145_6 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000659 587.0
DYD3_k127_2002145_7 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00528 - 1.18.1.2,1.19.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006392 531.0
DYD3_k127_2002145_8 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009273 534.0
DYD3_k127_2002145_9 Multicopper oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004294 535.0
DYD3_k127_2002763_0 Protein of unknown function (DUF1194) K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002833 290.0
DYD3_k127_2002763_1 von Willebrand factor type A domain K07114 - - 0.00000000000000000000000000000000000000003355 169.0
DYD3_k127_2008504_0 nitrous-oxide reductase activity K00376,K02275 GO:0000041,GO:0005575,GO:0005623,GO:0006810,GO:0006811,GO:0006812,GO:0006825,GO:0008150,GO:0015677,GO:0030001,GO:0042597,GO:0044464,GO:0051179,GO:0051234 1.7.2.4,1.9.3.1 1.268e-296 922.0
DYD3_k127_2008504_1 Fumarate reductase flavoprotein C-term K00239 - 1.3.5.1,1.3.5.4 2.926e-289 911.0
DYD3_k127_2008504_10 Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002723 443.0
DYD3_k127_2008504_11 Evidence 4 Homologs of previously reported genes of - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001497 452.0
DYD3_k127_2008504_12 Nitronate monooxygenase K00459 - 1.13.12.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001926 418.0
DYD3_k127_2008504_13 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 422.0
DYD3_k127_2008504_14 2Fe-2S iron-sulfur cluster binding domain K00240 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 403.0
DYD3_k127_2008504_15 alginic acid biosynthetic process K07218 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 378.0
DYD3_k127_2008504_16 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003413 367.0
DYD3_k127_2008504_17 ABC transporter K01990,K09695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000306 365.0
DYD3_k127_2008504_18 oxidoreductase activity, acting on CH-OH group of donors - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005268 340.0
DYD3_k127_2008504_19 NADPH:quinone reductase activity K00344 GO:0000166,GO:0003008,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0003824,GO:0003960,GO:0005198,GO:0005212,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006805,GO:0007600,GO:0007601,GO:0008150,GO:0008152,GO:0009056,GO:0009410,GO:0009987,GO:0016043,GO:0016491,GO:0016651,GO:0016655,GO:0022607,GO:0032501,GO:0036094,GO:0042178,GO:0042221,GO:0043167,GO:0043168,GO:0043933,GO:0044085,GO:0044237,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050661,GO:0050662,GO:0050877,GO:0050896,GO:0050953,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0051716,GO:0055114,GO:0065003,GO:0070402,GO:0070887,GO:0071466,GO:0071840,GO:0097159,GO:1901265,GO:1901363 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002278 334.0
DYD3_k127_2008504_2 TonB-dependent receptor K02014 - - 3.716e-213 691.0
DYD3_k127_2008504_20 Peptidase C26 K07010 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 313.0
DYD3_k127_2008504_21 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003647 314.0
DYD3_k127_2008504_22 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002965 309.0
DYD3_k127_2008504_23 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002057 297.0
DYD3_k127_2008504_24 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000003805 265.0
DYD3_k127_2008504_25 exo-alpha-(2->6)-sialidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007599 278.0
DYD3_k127_2008504_26 AAA domain, putative AbiEii toxin, Type IV TA system K01990,K19340 - - 0.0000000000000000000000000000000000000000000000000000000000000001108 240.0
DYD3_k127_2008504_27 Putative esterase K07017 - - 0.0000000000000000000000000000000000000000000000000000000000000007183 251.0
DYD3_k127_2008504_28 nitrous oxide K19341 - - 0.0000000000000000000000000000000000000000000000000000000000003042 223.0
DYD3_k127_2008504_29 lipoprotein involved in nitrous oxide reduction - - - 0.000000000000000000000000000000000000000000000000000000001317 210.0
DYD3_k127_2008504_3 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006446 627.0
DYD3_k127_2008504_30 - - - - 0.0000000000000000000000000000000000000000000000000000006899 218.0
DYD3_k127_2008504_31 - - - - 0.000000000000000000000000000000000000000000000000000001657 203.0
DYD3_k127_2008504_32 - - - - 0.0000000000000000000000000000000000000000000000000005716 196.0
DYD3_k127_2008504_33 - - - - 0.0000000000000000000000000000000000000000000000000981 183.0
DYD3_k127_2008504_34 domain protein - - - 0.000000000000000000000000000000000000000000000001469 188.0
DYD3_k127_2008504_35 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0000000000000000000000000000000000000001781 165.0
DYD3_k127_2008504_36 - - - - 0.0000000000000000000000000000000000000003194 164.0
DYD3_k127_2008504_37 Domain of unknown function (DUF4442) - - - 0.0000000000000000000000000000000000000008112 153.0
DYD3_k127_2008504_38 negative regulation of transcription, DNA-templated - GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0006950,GO:0006974,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051716,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2001141 - 0.000000000000000000000000000000000000008357 153.0
DYD3_k127_2008504_39 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.0000000000000000000000000000000000003065 142.0
DYD3_k127_2008504_4 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002688 538.0
DYD3_k127_2008504_40 cytochrome C - - - 0.000000000000000000000000000000001805 136.0
DYD3_k127_2008504_41 Protein of unknown function, DUF481 K07283 - - 0.0000000000000000000000000000006875 135.0
DYD3_k127_2008504_42 - - - - 0.00000000000000000000000001164 124.0
DYD3_k127_2008504_43 2 iron, 2 sulfur cluster binding K13643 - - 0.0000000000000000000000005272 110.0
DYD3_k127_2008504_44 - - - - 0.000000000000000000000001077 114.0
DYD3_k127_2008504_45 NosL K19342 - - 0.00000000000000001261 95.0
DYD3_k127_2008504_46 - - - - 0.00000000000000001334 91.0
DYD3_k127_2008504_47 Rho termination factor, N-terminal domain - - - 0.000000001455 62.0
DYD3_k127_2008504_5 Glycosyl transferase family group 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008024 536.0
DYD3_k127_2008504_6 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006275 489.0
DYD3_k127_2008504_7 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006276 482.0
DYD3_k127_2008504_8 Peptidase family S58 K01266 - 3.4.11.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009542 484.0
DYD3_k127_2008504_9 UDP-N-acetylglucosamine 2-epimerase K01791 - 5.1.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002474 460.0
DYD3_k127_2011558_0 PFAM magnesium chelatase ChlI subunit K07391 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001291 568.0
DYD3_k127_2011558_1 iron ion binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003434 463.0
DYD3_k127_2011558_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000000009414 187.0
DYD3_k127_2011558_3 - - - - 0.00000000000000000000000000000001913 141.0
DYD3_k127_2011558_4 - - - - 0.0000000000000000000000000000001085 132.0
DYD3_k127_2011558_5 - - - - 0.00000000000000093 84.0
DYD3_k127_2011558_6 - - - - 0.0000009125 58.0
DYD3_k127_2052788_0 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002099 575.0
DYD3_k127_2052788_1 antibiotic catabolic process K18235 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 409.0
DYD3_k127_2052788_2 protein conserved in bacteria K09797 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002031 263.0
DYD3_k127_2052788_3 Sortilin, neurotensin receptor 3, - - - 0.00000000000000000000000000000000000000004007 158.0
DYD3_k127_2052788_4 Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide - - - 0.00000000000000000000000000000000000004626 160.0
DYD3_k127_2052788_5 - - - - 0.00000000000002253 74.0
DYD3_k127_2052788_6 PFAM GGDEF domain containing protein - - - 0.000000005379 68.0
DYD3_k127_2062550_0 Tricorn protease homolog K08676 - - 0.0 1356.0
DYD3_k127_2062550_1 Sortilin, neurotensin receptor 3, - - - 0.0 1289.0
DYD3_k127_2062550_10 Oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 308.0
DYD3_k127_2062550_11 UreE urease accessory protein, C-terminal domain K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001642 287.0
DYD3_k127_2062550_12 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005295 291.0
DYD3_k127_2062550_13 PFAM Methyladenine glycosylase K01246 - 3.2.2.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000001528 264.0
DYD3_k127_2062550_14 Carbonic anhydrase K01673 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000002557 261.0
DYD3_k127_2062550_15 metallopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001081 268.0
DYD3_k127_2062550_16 AAA domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003271 256.0
DYD3_k127_2062550_17 Methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000005163 220.0
DYD3_k127_2062550_18 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000001415 204.0
DYD3_k127_2062550_19 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000000000003177 194.0
DYD3_k127_2062550_2 Oxidoreductase - - - 1.172e-225 724.0
DYD3_k127_2062550_20 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000000000000000000004183 182.0
DYD3_k127_2062550_21 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD - - - 0.000000000000000000000000000000000000000000000001415 184.0
DYD3_k127_2062550_22 transcriptional regulator, ArsR family - - - 0.000000000000000000000000000000000000000000000002069 175.0
DYD3_k127_2062550_23 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000001499 173.0
DYD3_k127_2062550_24 - - - - 0.00000000000000000000000000000000000000000004068 168.0
DYD3_k127_2062550_25 - - - - 0.000000000000000000000000000000000000000007686 159.0
DYD3_k127_2062550_26 - - - - 0.00000000000000000000000000000000000000001291 158.0
DYD3_k127_2062550_27 Dihydrofolate reductase - - - 0.0000000000000000000000000000000000000004457 155.0
DYD3_k127_2062550_28 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins - - - 0.0000000000000000000000000000000000001664 148.0
DYD3_k127_2062550_29 methyltransferase activity - - - 0.00000000000000000000000000000002637 132.0
DYD3_k127_2062550_3 Amidase K01426 - 3.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002091 510.0
DYD3_k127_2062550_30 - - - - 0.000000000000000000000000000001071 129.0
DYD3_k127_2062550_31 - - - - 0.0000000000000000000000000006379 129.0
DYD3_k127_2062550_32 YCII-related domain - - - 0.000000000000000000000000005719 114.0
DYD3_k127_2062550_33 DinB family - - - 0.0000000000000000000036 96.0
DYD3_k127_2062550_34 Uncharacterized conserved protein (DUF2277) - - - 0.000000000000000006907 86.0
DYD3_k127_2062550_35 - - - - 0.00000000000000009679 86.0
DYD3_k127_2062550_36 - - - - 0.00000000002798 75.0
DYD3_k127_2062550_37 TIGRFAM Phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.00000008084 56.0
DYD3_k127_2062550_39 lactoylglutathione lyase activity - - - 0.0003338 46.0
DYD3_k127_2062550_4 glucose sorbosone K00117,K21430 GO:0003674,GO:0003824,GO:0005488,GO:0005509,GO:0005575,GO:0005623,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016901,GO:0019842,GO:0030288,GO:0030313,GO:0031406,GO:0031975,GO:0036094,GO:0042597,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0044464,GO:0046872,GO:0048037,GO:0048038,GO:0055114,GO:0070968,GO:0097159,GO:1901363 1.1.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002007 472.0
DYD3_k127_2062550_5 Glycine cleavage T-protein C-terminal barrel domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 466.0
DYD3_k127_2062550_6 Glycine cleavage T-protein C-terminal barrel domain K00605 - 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002116 449.0
DYD3_k127_2062550_7 PFAM Rieske 2Fe-2S domain protein K00479,K00499 - 1.14.15.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008278 410.0
DYD3_k127_2062550_8 Sigma-70 region 2 K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002244 392.0
DYD3_k127_2062550_9 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009747 342.0
DYD3_k127_2075592_0 TIGRFAM heavy metal efflux pump, CzcA family K07787 - - 0.0 1196.0
DYD3_k127_2075592_1 Multicopper oxidase K00368 - 1.7.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003532 537.0
DYD3_k127_2075592_10 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.000000000000000000000000000000000000000000000000005144 189.0
DYD3_k127_2075592_11 - - - - 0.0000000000000000000000000000001845 128.0
DYD3_k127_2075592_12 peroxiredoxin activity K03386,K03564,K16922 - 1.11.1.15 0.0000000000000000000000000000003241 125.0
DYD3_k127_2075592_13 MerR, DNA binding K08365,K19591 - - 0.000000000000000000000000000001745 125.0
DYD3_k127_2075592_14 Protein conserved in bacteria - - - 0.00000000000000000000000001475 115.0
DYD3_k127_2075592_15 MerT mercuric transport protein - - - 0.0000000000001588 76.0
DYD3_k127_2075592_16 hydroperoxide reductase activity - - - 0.000000000004497 70.0
DYD3_k127_2075592_17 Nitrogen regulatory protein P-II K04751 - - 0.000000000004832 71.0
DYD3_k127_2075592_18 peroxiredoxin activity K03386,K03564,K16922 - 1.11.1.15 0.00000000005829 66.0
DYD3_k127_2075592_19 PA26 p53-induced protein (sestrin) - - - 0.00000000006578 66.0
DYD3_k127_2075592_2 COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002094 457.0
DYD3_k127_2075592_20 Heavy-metal-associated domain - - - 0.0000000001372 68.0
DYD3_k127_2075592_21 Copper binding proteins, plastocyanin/azurin family - - - 0.000000004132 66.0
DYD3_k127_2075592_22 Uncharacterised protein family UPF0066 - - - 0.000000006119 60.0
DYD3_k127_2075592_23 COG3794 Plastocyanin - - - 0.000000007006 62.0
DYD3_k127_2075592_24 Uncharacterized protein conserved in bacteria (DUF2064) K09931 - - 0.0000001424 58.0
DYD3_k127_2075592_25 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.000004552 54.0
DYD3_k127_2075592_26 - - - - 0.0002437 51.0
DYD3_k127_2075592_28 Erythromycin esterase K06880 - - 0.000799 49.0
DYD3_k127_2075592_3 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006001 322.0
DYD3_k127_2075592_4 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002494 311.0
DYD3_k127_2075592_5 Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress - - - 0.0000000000000000000000000000000000000000000000000000000000000000164 228.0
DYD3_k127_2075592_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798,K15727 - - 0.00000000000000000000000000000000000000000000000000000000000000004284 237.0
DYD3_k127_2075592_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000005372 222.0
DYD3_k127_2075592_8 - - - - 0.000000000000000000000000000000000000000000000000000000007967 214.0
DYD3_k127_2075592_9 Maf-like protein K06287 - - 0.00000000000000000000000000000000000000000000000000007774 201.0
DYD3_k127_2082972_0 cellulose binding - - - 0.0 1279.0
DYD3_k127_2082972_1 DNA ligase (ATP) activity K01971 - 6.5.1.1 8.594e-308 964.0
DYD3_k127_2082972_10 CAAX protease self-immunity K07052 - - 0.000000000000000000000000000000000000000000000000000000000001758 218.0
DYD3_k127_2082972_11 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000009254 209.0
DYD3_k127_2082972_12 response regulator K10943 - - 0.0000000000000000000000000000000000000000000000004017 189.0
DYD3_k127_2082972_13 PFAM S1 P1 nuclease - - - 0.000000000000000000000000000000000000000000002063 175.0
DYD3_k127_2082972_14 lipid kinase, YegS Rv2252 BmrU family - - - 0.000000000000000000000000000000000000000000002567 176.0
DYD3_k127_2082972_15 nuclear chromosome segregation - - - 0.00000000000000000000000000000000000000000005958 173.0
DYD3_k127_2082972_16 Peptidyl-prolyl cis-trans isomerase K01802,K03772 - 5.2.1.8 0.0000000000000000000000000000000000000005747 158.0
DYD3_k127_2082972_17 Phosphoglycerate mutase family K08296 - - 0.000000000000000000000000000000000000002087 152.0
DYD3_k127_2082972_18 luxR family K14979 - - 0.00000000000000000000000002184 117.0
DYD3_k127_2082972_19 Domain of unknown function (DUF1707) - - - 0.000000878 60.0
DYD3_k127_2082972_2 proline dipeptidase activity - - - 1.307e-198 628.0
DYD3_k127_2082972_3 CarboxypepD_reg-like domain K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003363 567.0
DYD3_k127_2082972_4 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004161 325.0
DYD3_k127_2082972_5 Bacterial Na+/H+ antiporter B (NhaB) K03893 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003698 295.0
DYD3_k127_2082972_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003656 286.0
DYD3_k127_2082972_7 Citrate transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000105 286.0
DYD3_k127_2082972_8 Belongs to the LOG family K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000003988 265.0
DYD3_k127_2082972_9 PFAM Sodium calcium exchanger membrane region K07301 - - 0.000000000000000000000000000000000000000000000000000000000000000000001411 247.0
DYD3_k127_2127544_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 7.737e-250 790.0
DYD3_k127_2130204_0 ATPase (AAA superfamily K07133 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006571 467.0
DYD3_k127_2130204_1 peptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000448 334.0
DYD3_k127_2130204_2 - - - - 0.0000000004252 62.0
DYD3_k127_2138853_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 3.514e-315 996.0
DYD3_k127_2138853_1 efflux transmembrane transporter activity K18300,K18308 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000522 413.0
DYD3_k127_2138853_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 382.0
DYD3_k127_2138853_3 ATP dependent DNA ligase domain protein K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003258 319.0
DYD3_k127_2138853_4 Mycolic acid cyclopropane synthetase - - - 0.00000000000000000000000000000000000004458 157.0
DYD3_k127_2138853_5 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000002497 75.0
DYD3_k127_2161248_0 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007068 331.0
DYD3_k127_2161248_1 Participates in transcription elongation, termination and antitermination K02601 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000126 254.0
DYD3_k127_2161248_2 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.00000000000000000000000000000000000000000000000000000000051 206.0
DYD3_k127_2161248_3 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.000000000000000000000000000000000000009163 148.0
DYD3_k127_2161248_4 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.0000000000000000000000000000000009714 145.0
DYD3_k127_2161248_5 Ribosomal protein L33 K02913 - - 0.0000000000000000000002144 96.0
DYD3_k127_2161248_6 GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.000000000000000952 76.0
DYD3_k127_2161248_7 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0040007,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.0000004965 54.0
DYD3_k127_2187138_0 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000002399 144.0
DYD3_k127_2187138_1 Cold shock protein K03704 - - 0.0000000000000000000000000000002552 123.0
DYD3_k127_2187138_2 - - - - 0.00000000000000000000000001533 117.0
DYD3_k127_2187138_3 SMART chemotaxis sensory transducer, histidine kinase HAMP region domain protein - - - 0.00000000000000003711 96.0
DYD3_k127_2187138_4 response regulator K07714 - - 0.0000000008085 64.0
DYD3_k127_2187138_5 MerR HTH family regulatory protein - - - 0.00000002573 58.0
DYD3_k127_2187138_6 YceI-like domain - - - 0.000004993 57.0
DYD3_k127_2193649_0 AAA domain K03546 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003437 339.0
DYD3_k127_2193649_1 Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009906 303.0
DYD3_k127_2236760_0 Hydrogenase formation hypA family K04654 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006257 480.0
DYD3_k127_2236760_1 carbon dioxide binding K04653,K04654 - - 0.00000000000000000000000000000007639 127.0
DYD3_k127_2248436_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 7.232e-279 870.0
DYD3_k127_2248436_1 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 2.924e-235 745.0
DYD3_k127_2248436_10 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000000000000000000000000000000000007317 251.0
DYD3_k127_2248436_11 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.000000000000000000000000000000000000000000000000000000000000000000007231 250.0
DYD3_k127_2248436_12 Polyprenyl synthetase K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.00000000000000000000000000000000000000000000000000000000000000000004031 245.0
DYD3_k127_2248436_13 May be involved in recombinational repair of damaged DNA K03631 - - 0.0000000000000000000000000000000000000000000000000000000000000003199 242.0
DYD3_k127_2248436_14 phosphorelay signal transduction system - - - 0.000000000000000000000000000000000000000000000002778 197.0
DYD3_k127_2248436_15 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800,K00945 - 2.5.1.19,2.7.4.25 0.00000000000000000000000000000000000000000004814 170.0
DYD3_k127_2248436_16 - - - - 0.00000000000000000000000000000000927 143.0
DYD3_k127_2248436_17 Response regulator, receiver - - - 0.000000000000000000001048 100.0
DYD3_k127_2248436_18 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.000000000000004009 80.0
DYD3_k127_2248436_19 General secretion pathway protein G K02456 - - 0.00004961 52.0
DYD3_k127_2248436_2 Endoribonuclease that initiates mRNA decay K18682 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002095 594.0
DYD3_k127_2248436_20 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.00005887 53.0
DYD3_k127_2248436_3 B3/4 domain K01890 - 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002627 590.0
DYD3_k127_2248436_4 cAMP biosynthetic process K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006919 421.0
DYD3_k127_2248436_5 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009038 362.0
DYD3_k127_2248436_6 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004253 332.0
DYD3_k127_2248436_7 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800,K00945 - 2.5.1.19,2.7.4.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003664 321.0
DYD3_k127_2248436_8 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003926 301.0
DYD3_k127_2248436_9 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008989 288.0
DYD3_k127_2278356_0 PA14 domain K05349 - 3.2.1.21 0.0 1074.0
DYD3_k127_2278356_1 Alpha-L-fucosidase K01206 - 3.2.1.51 2.288e-201 653.0
DYD3_k127_2278356_2 Zinc carboxypeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003689 343.0
DYD3_k127_2278356_3 phosphorelay signal transduction system - - - 0.000000000000000000000000000000000000000000000001114 199.0
DYD3_k127_2278356_4 Pfam Adenylate and Guanylate cyclase catalytic domain - - - 0.00000002401 68.0
DYD3_k127_2279540_0 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004767 540.0
DYD3_k127_2279540_1 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 510.0
DYD3_k127_2279540_10 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000001098 227.0
DYD3_k127_2279540_11 Telomere recombination K07566 - 2.7.7.87 0.00000000000000000000000000000000000000000000000000000002607 205.0
DYD3_k127_2279540_12 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.00000000000000000000000000000000000000000000000000000005335 211.0
DYD3_k127_2279540_13 Domain of unknown function (DUF1732) - - - 0.000000000000000000000000000000000000000000000000002806 192.0
DYD3_k127_2279540_14 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 - 2.7.7.60 0.0000000000000000000000000000000000000000000000009029 183.0
DYD3_k127_2279540_15 Low molecular weight phosphatase family K01104 - 3.1.3.48 0.00000000000000000000000000000000000002589 149.0
DYD3_k127_2279540_16 Phosphoribosyl transferase domain - - - 0.0000000000000000000000000000000000514 144.0
DYD3_k127_2279540_17 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.0000000000000000000000000000000003128 142.0
DYD3_k127_2279540_18 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits - - - 0.00000000001512 67.0
DYD3_k127_2279540_19 PEP-CTERM system TPR-repeat lipoprotein - - - 0.0000001908 64.0
DYD3_k127_2279540_2 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001644 465.0
DYD3_k127_2279540_21 TonB-dependent Receptor Plug K16092 - - 0.0001141 55.0
DYD3_k127_2279540_3 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003729 438.0
DYD3_k127_2279540_4 UPF0365 protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003863 418.0
DYD3_k127_2279540_5 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 402.0
DYD3_k127_2279540_6 Cellulose synthase K00694 - 2.4.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008069 392.0
DYD3_k127_2279540_7 Phosphoglycerate kinase K00927 - 2.7.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 348.0
DYD3_k127_2279540_8 Membrane-bound serine protease (ClpP class) K07403 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009 318.0
DYD3_k127_2279540_9 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000003139 237.0
DYD3_k127_2296901_0 Type IV pilus assembly protein PilM; K02662 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006174 263.0
DYD3_k127_2296901_1 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.000000000000000000000000000000000000000000000000000000000000000007342 234.0
DYD3_k127_2296901_2 Pilus assembly protein, PilO K02664 - - 0.00000000000000000001773 98.0
DYD3_k127_2296901_3 type IV pilus secretin PilQ K02666 - - 0.0000000000000000731 94.0
DYD3_k127_2296901_4 Fimbrial assembly protein (PilN) K02663 - - 0.0000000000000002326 87.0
DYD3_k127_2296901_5 Pilus assembly protein, PilP K02665 - - 0.00001278 56.0
DYD3_k127_2296901_6 Type II transport protein GspH K08084 - - 0.0002443 51.0
DYD3_k127_233150_0 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 6.955e-228 728.0
DYD3_k127_233150_1 TIGRFAM 40-residue YVTN family beta-propeller repeat - - - 0.0000000000000000000000000000000000000000001029 178.0
DYD3_k127_233150_2 Beta-lactamase - - - 0.0000000000000000000005569 104.0
DYD3_k127_2342592_0 DEAD DEAH box helicase K03724 - - 0.0 1587.0
DYD3_k127_2342592_1 serine-type exopeptidase activity K01322 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.21.26 4.014e-309 972.0
DYD3_k127_2342592_10 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000000000004535 149.0
DYD3_k127_2342592_11 Belongs to the amidase family K01426 - 3.5.1.4 0.0000000000000000000000000002355 117.0
DYD3_k127_2342592_12 Methylated dna-protein cysteine methyltransferase K07443 - - 0.0000000000000000000000005611 107.0
DYD3_k127_2342592_13 monooxygenase activity - - - 0.000000000000000000000003163 110.0
DYD3_k127_2342592_15 Putative prokaryotic signal transducing protein - - - 0.00000002365 59.0
DYD3_k127_2342592_16 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.00000004051 66.0
DYD3_k127_2342592_17 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633,K13940 GO:0008150,GO:0040007 1.13.11.81,2.7.6.3,4.1.2.25,5.1.99.8 0.00003313 52.0
DYD3_k127_2342592_18 - - - - 0.0004414 48.0
DYD3_k127_2342592_2 FtsX-like permease family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003735 545.0
DYD3_k127_2342592_3 Peptidase family M20/M25/M40 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000615 446.0
DYD3_k127_2342592_4 Threonyl alanyl tRNA synthetase SAD K01872 - 6.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004665 340.0
DYD3_k127_2342592_5 tail specific protease K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005025 332.0
DYD3_k127_2342592_6 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002472 314.0
DYD3_k127_2342592_7 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009972 295.0
DYD3_k127_2342592_8 - - - - 0.00000000000000000000000000000000000000000000000000000000000002158 220.0
DYD3_k127_2342592_9 DinB family - - - 0.000000000000000000000000000000000000001781 157.0
DYD3_k127_2343105_0 Binding-protein-dependent transport system inner membrane component K11071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003052 301.0
DYD3_k127_2343105_1 TOBE domain K02017,K11072 - 3.6.3.29,3.6.3.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002767 303.0
DYD3_k127_2343105_2 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002577 297.0
DYD3_k127_2343105_3 Bacterial extracellular solute-binding protein K11069 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002733 301.0
DYD3_k127_2343105_4 PFAM binding-protein-dependent transport systems inner membrane component K11070 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004274 269.0
DYD3_k127_2343105_5 - - - - 0.0000000000001046 78.0
DYD3_k127_2357492_0 Bacterial Ig-like domain (group 2) - - - 0.000000000006533 79.0
DYD3_k127_2357492_1 - - - - 0.00000004243 62.0
DYD3_k127_2374955_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 0.0 1253.0
DYD3_k127_2374955_1 TonB dependent receptor - - - 3.566e-198 655.0
DYD3_k127_2374955_10 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000008899 249.0
DYD3_k127_2374955_11 Binding-protein-dependent transport system inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000001889 236.0
DYD3_k127_2374955_12 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000001259 234.0
DYD3_k127_2374955_13 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000000000000000000000000000000000009137 220.0
DYD3_k127_2374955_14 ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component - - - 0.000000000000000000000000000000000000000000000000000000003679 206.0
DYD3_k127_2374955_15 PAP2 superfamily - - - 0.000000000000000000000000000000000000000000000000002684 198.0
DYD3_k127_2374955_16 Biotin/lipoate A/B protein ligase family K03800 - 6.3.1.20 0.00000000000000000000000000000000000000000000003439 183.0
DYD3_k127_2374955_17 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.000000000000000000000000000000000000000000001915 168.0
DYD3_k127_2374955_18 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000002803 166.0
DYD3_k127_2374955_19 DinB family - - - 0.0000000000000000000000000000000000000006855 155.0
DYD3_k127_2374955_2 Protein of unknown function (DUF1501) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009835 444.0
DYD3_k127_2374955_20 Winged helix DNA-binding domain - - - 0.0000000000000000000000000000000000002771 145.0
DYD3_k127_2374955_22 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0000166,GO:0001882,GO:0001884,GO:0002135,GO:0003674,GO:0003824,GO:0004140,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0018130,GO:0019103,GO:0019438,GO:0019637,GO:0019693,GO:0030554,GO:0032549,GO:0032551,GO:0032552,GO:0032553,GO:0032554,GO:0032557,GO:0032558,GO:0032564,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.00000000000000000000001886 106.0
DYD3_k127_2374955_23 Protein of unknown function (DUF1579) - - - 0.000000000000000001255 98.0
DYD3_k127_2374955_24 efflux transmembrane transporter activity - - - 0.0000000003295 63.0
DYD3_k127_2374955_3 Bacterial low temperature requirement A protein (LtrA) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 409.0
DYD3_k127_2374955_4 Protein of unknown function (DUF1800) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000638 384.0
DYD3_k127_2374955_5 Belongs to the ABC transporter superfamily K10823 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001851 358.0
DYD3_k127_2374955_6 Phenazine biosynthesis-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002718 322.0
DYD3_k127_2374955_7 Belongs to the ABC transporter superfamily K02031,K15583 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002695 321.0
DYD3_k127_2374955_8 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008102 325.0
DYD3_k127_2374955_9 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000002126 274.0
DYD3_k127_2394552_0 FeoA - - - 1.715e-275 867.0
DYD3_k127_2394552_1 DNA restriction-modification system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006469 426.0
DYD3_k127_2394552_2 Putative esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006361 368.0
DYD3_k127_2394552_3 iron ion homeostasis K03322,K03709,K04758 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006239 258.0
DYD3_k127_2394552_4 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01534 - 3.6.3.3,3.6.3.5 0.000000000000000000000000000000000000000000000000000000000000008375 228.0
DYD3_k127_2394552_5 NUDIX domain - - - 0.0000000000000000000000000000000004399 141.0
DYD3_k127_2394552_6 Psort location Cytoplasmic, score K21903 - - 0.0000000000000000000000000000000125 130.0
DYD3_k127_2394552_7 - - - - 0.0000000000000000001716 96.0
DYD3_k127_2420157_0 protein kinase activity - - - 8.195e-203 674.0
DYD3_k127_2420157_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 8.386e-200 646.0
DYD3_k127_2420157_10 Methyltransferase type 11 K07755 - 2.1.1.137 0.00000000000000000000000000000000000000000008568 166.0
DYD3_k127_2420157_11 - - - - 0.000000000000000000000000000000000000000001532 170.0
DYD3_k127_2420157_12 WD40-like Beta Propeller Repeat K03641 - - 0.0000000000000000000000000000000008163 151.0
DYD3_k127_2420157_13 Beta-lactamase - - - 0.00000000000000000000000008273 115.0
DYD3_k127_2420157_15 Protein of unknown function (DUF3494) - - - 0.0000000805 66.0
DYD3_k127_2420157_16 SnoaL-like domain - - - 0.00002039 56.0
DYD3_k127_2420157_2 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004527 595.0
DYD3_k127_2420157_3 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001986 549.0
DYD3_k127_2420157_4 Tetratricopeptide repeats K08282,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005219 440.0
DYD3_k127_2420157_5 HD domain K07814 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003165 440.0
DYD3_k127_2420157_6 Berberine and berberine like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001713 380.0
DYD3_k127_2420157_7 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000001173 231.0
DYD3_k127_2420157_8 Nodulation protein S (NodS) - - - 0.00000000000000000000000000000000000000000000000000000000000000001304 237.0
DYD3_k127_2420157_9 DinB superfamily - - - 0.000000000000000000000000000000000000000000000000741 181.0
DYD3_k127_2437534_0 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003824 532.0
DYD3_k127_2437534_1 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001683 434.0
DYD3_k127_2437534_2 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000001324 156.0
DYD3_k127_2437534_3 ATPase related to the helicase subunit of the Holliday junction resolvase K07478 - - 0.000000000000000000000001191 105.0
DYD3_k127_2462733_0 Zinc carboxypeptidase K14054 - - 0.0 1156.0
DYD3_k127_2462733_1 homogentisate 1,2-dioxygenase K00451 - 1.13.11.5 6.841e-199 629.0
DYD3_k127_2462733_10 PFAM phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 K02806 - - 0.000000000000000000000000000000000000000000000000000000001077 213.0
DYD3_k127_2462733_11 Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX - - - 0.00000000000000000000000000000000000000005089 175.0
DYD3_k127_2462733_12 - - - - 0.000000000000000000000000000000001371 132.0
DYD3_k127_2462733_13 - - - - 0.000000000000000005032 87.0
DYD3_k127_2462733_14 - - - - 0.000000000001294 74.0
DYD3_k127_2462733_2 - - - - 1.681e-194 644.0
DYD3_k127_2462733_3 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal K00457 - 1.13.11.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001386 552.0
DYD3_k127_2462733_4 Respiratory-chain NADH dehydrogenase, 49 Kd subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005643 520.0
DYD3_k127_2462733_5 PFAM NADH Ubiquinone plastoquinone (complex I) K12137 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002441 454.0
DYD3_k127_2462733_6 Proton-conducting membrane transporter K12141 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002 415.0
DYD3_k127_2462733_7 NADH dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000023 298.0
DYD3_k127_2462733_8 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001467 300.0
DYD3_k127_2462733_9 hydrogenase 4 membrane K12140 - - 0.0000000000000000000000000000000000000000000000000000000009512 208.0
DYD3_k127_2466076_0 Arginosuccinate synthase K01940 - 6.3.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002234 418.0
DYD3_k127_2466076_1 Tfp pilus assembly protein FimV - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004417 397.0
DYD3_k127_2466076_10 ABC 3 transport family K02075,K09816 - - 0.000000000000000000000000000000000000000000000000000000000001272 224.0
DYD3_k127_2466076_11 HAD-hyrolase-like K06019 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000001961 207.0
DYD3_k127_2466076_12 Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. LysY sub-subfamily K05829 - - 0.0000000000000000000000000000000000000000000000000000002201 211.0
DYD3_k127_2466076_13 SNF2 family N-terminal domain - - - 0.00000000000000000000000000000002487 146.0
DYD3_k127_2466076_14 Regulates arginine biosynthesis genes K03402 - - 0.00000000000000000000002101 109.0
DYD3_k127_2466076_15 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K07141,K19190 - 1.1.1.328,2.7.7.76 0.0000000000000001061 93.0
DYD3_k127_2466076_16 OmpA family - - - 0.00000000000006856 85.0
DYD3_k127_2466076_17 DNA restriction-modification system - - - 0.0006363 46.0
DYD3_k127_2466076_2 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K00857,K01920,K01935 GO:0003674,GO:0003824,GO:0004141,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0017144,GO:0018130,GO:0019752,GO:0032787,GO:0034641,GO:0042364,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.21,6.3.2.3,6.3.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004483 312.0
DYD3_k127_2466076_3 PFAM Aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 310.0
DYD3_k127_2466076_4 TIGRFAM argininosuccinate lyase K01755 - 4.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 321.0
DYD3_k127_2466076_5 Belongs to the ATCase OTCase family K09065 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0043857,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004779 301.0
DYD3_k127_2466076_6 XdhC and CoxI family K07402 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001869 289.0
DYD3_k127_2466076_7 Zinc-uptake complex component A periplasmic K09815 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002187 291.0
DYD3_k127_2466076_8 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000005079 261.0
DYD3_k127_2466076_9 Peptidase dimerisation domain K01438 - 3.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000001234 246.0
DYD3_k127_2468531_0 Biotin carboxylase C-terminal domain K01961 - 6.3.4.14,6.4.1.2 2.166e-216 679.0
DYD3_k127_2468531_1 Type II/IV secretion system protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009148 510.0
DYD3_k127_2468531_10 Is involved in the catabolism of quinate. Allows the utilization of quinate as carbon source via the beta-ketoadipate pathway K03786 GO:0003674,GO:0003824,GO:0003855,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0019630,GO:0019631,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0071704,GO:0072329,GO:1901360,GO:1901361,GO:1901575,GO:1901615,GO:1901616 4.2.1.10 0.00000000000000000000000000000000000000000006826 166.0
DYD3_k127_2468531_11 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.00000000000000000000000000000000001649 142.0
DYD3_k127_2468531_12 Domain of unknown function (DUF4321) - - - 0.0000000000000000001225 98.0
DYD3_k127_2468531_13 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.0000000000125 68.0
DYD3_k127_2468531_14 Tetratricopeptide repeat - - - 0.000005367 59.0
DYD3_k127_2468531_2 Aromatic amino acid lyase K01745 - 4.3.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007671 501.0
DYD3_k127_2468531_3 Polyprenyl synthetase K02523 - 2.5.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008915 346.0
DYD3_k127_2468531_4 Ftsk_gamma K03466 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003627 344.0
DYD3_k127_2468531_5 SurA N-terminal domain K03770 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 344.0
DYD3_k127_2468531_6 Creatinase/Prolidase N-terminal domain K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 331.0
DYD3_k127_2468531_7 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000004829 232.0
DYD3_k127_2468531_8 involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane - - - 0.000000000000000000000000000000000000000000000000000000000641 219.0
DYD3_k127_2468531_9 2-phosphosulpholactate phosphatase K05979 - 3.1.3.71 0.00000000000000000000000000000000000000000000005997 179.0
DYD3_k127_2477514_0 Dienelactone hydrolase family - - - 0.0 1018.0
DYD3_k127_2477514_1 FAD linked oxidases, C-terminal domain K00803 - 2.5.1.26 3.055e-225 713.0
DYD3_k127_2477514_10 epimerase dehydratase K00091 - 1.1.1.219 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 310.0
DYD3_k127_2477514_11 Peptidase family M23 K21472 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008005 307.0
DYD3_k127_2477514_12 ArgK protein K07588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001074 280.0
DYD3_k127_2477514_13 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003765 273.0
DYD3_k127_2477514_14 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000004031 261.0
DYD3_k127_2477514_15 Phosphate acyltransferases - - - 0.0000000000000000000000000000000000000000000000000000000000000001854 237.0
DYD3_k127_2477514_16 - - - - 0.00000000000000000000000000000000000000000000000000001105 202.0
DYD3_k127_2477514_17 gliding motility-associated protein GldE - - - 0.00000000000000000000000000000000000000000000000000407 197.0
DYD3_k127_2477514_18 Penicillinase repressor - - - 0.0000000000000000000000000000000000000000005626 160.0
DYD3_k127_2477514_19 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04565 - 1.15.1.1 0.000000000000000000000000000000000000000009873 160.0
DYD3_k127_2477514_2 cellulose binding - - - 4.892e-221 689.0
DYD3_k127_2477514_20 OsmC-like protein K04063 - - 0.0000000000000000000000000000000000000005272 153.0
DYD3_k127_2477514_21 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin - - - 0.0000000000000000000000000000000000000009978 153.0
DYD3_k127_2477514_22 Domain of unknown function DUF21 K03699 - - 0.000000000000000000000000000000000001499 153.0
DYD3_k127_2477514_23 HD superfamily hydrolase involved in NAD metabolism K00950 - 2.7.6.3 0.000000000000000000000000000000000002319 144.0
DYD3_k127_2477514_24 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.0000000000000000000000000001317 122.0
DYD3_k127_2477514_25 - - - - 0.0000000000000000000002846 109.0
DYD3_k127_2477514_26 methyl-accepting chemotaxis protein K03406 - - 0.0000000000000000002814 103.0
DYD3_k127_2477514_27 lysine biosynthetic process via aminoadipic acid - - - 0.00000000000009223 78.0
DYD3_k127_2477514_28 LytR cell envelope-related transcriptional attenuator - - - 0.0000000000001214 81.0
DYD3_k127_2477514_29 23S rRNA-intervening sequence protein - - - 0.0000000004339 66.0
DYD3_k127_2477514_3 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) K01876 - 6.1.1.12 4.666e-208 665.0
DYD3_k127_2477514_30 pyrroloquinoline quinone binding - - - 0.0000001114 60.0
DYD3_k127_2477514_31 transport - - - 0.00003862 53.0
DYD3_k127_2477514_4 Peptidase family M28 - - - 3.335e-206 654.0
DYD3_k127_2477514_5 dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes K13356 - 1.2.1.84 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006324 632.0
DYD3_k127_2477514_6 repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 529.0
DYD3_k127_2477514_7 PhoH-like protein K06217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008489 409.0
DYD3_k127_2477514_8 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008237 387.0
DYD3_k127_2477514_9 Acts as a magnesium transporter K06213 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003002 343.0
DYD3_k127_2487341_0 Mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001546 462.0
DYD3_k127_2500861_0 cellulose binding - - - 0.0 1222.0
DYD3_k127_2500861_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 GO:0003674,GO:0003824,GO:0004176,GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009057,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0030163,GO:0042623,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003411 379.0
DYD3_k127_2500861_2 1,4-alpha-glucan branching enzyme activity K00700 - 2.4.1.18 0.000000001672 70.0
DYD3_k127_2500861_3 - - - - 0.00001215 55.0
DYD3_k127_2511669_0 MaoC like domain K02618 - 1.2.1.91,3.3.2.12 0.0 1006.0
DYD3_k127_2511669_1 dehydrogenase, E1 component K11381 - 1.2.4.4 9.121e-306 958.0
DYD3_k127_2511669_10 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 305.0
DYD3_k127_2511669_11 Belongs to the enoyl-CoA hydratase isomerase family K15866 - 5.3.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003115 310.0
DYD3_k127_2511669_12 Phenylacetate-CoA oxygenase K02611 - 1.14.13.149 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006299 303.0
DYD3_k127_2511669_13 Enoyl-CoA hydratase/isomerase K13766 - 4.2.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003937 304.0
DYD3_k127_2511669_14 Pfam:DUF59 K02612 - - 0.000000000000000000000000000000000000000000000000000004311 197.0
DYD3_k127_2511669_15 Phenylacetic acid degradation B K02610 - - 0.000000000000000000000000000000000000000005737 164.0
DYD3_k127_2511669_16 Thioesterase superfamily K02614 - - 0.0000000000000000000000000000000000000007789 153.0
DYD3_k127_2511669_17 Protein of unknown function (DUF1572) - - - 0.0000000000000000000000000000000001313 139.0
DYD3_k127_2511669_2 Thiolase, C-terminal domain K02615 - 2.3.1.174,2.3.1.223 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008526 567.0
DYD3_k127_2511669_3 Phenylacetic acid catabolic protein K02609 - 1.14.13.149 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001881 539.0
DYD3_k127_2511669_4 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007989 434.0
DYD3_k127_2511669_5 Formamidopyrimidine-DNA glycosylase N-terminal domain K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006661 406.0
DYD3_k127_2511669_6 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 393.0
DYD3_k127_2511669_7 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003454 369.0
DYD3_k127_2511669_8 Dicarboxylate carrier - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 321.0
DYD3_k127_2511669_9 Bacterial transferase hexapeptide (six repeats) K02617 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005216 308.0
DYD3_k127_2543160_0 electron transfer activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000263 550.0
DYD3_k127_2543160_1 OmpA family - - - 0.000000000000000000000000000000000000000000000000000000000000000002731 239.0
DYD3_k127_2543160_2 Domain of unknown function (DUF4956) - - - 0.00000000000000000000000000000000001444 150.0
DYD3_k127_2543160_3 SdiA-regulated - - - 0.00000000000000000000000000004672 131.0
DYD3_k127_2543160_4 - - - - 0.0000000001053 66.0
DYD3_k127_2543160_5 Peptidase family M48 - - - 0.000003469 58.0
DYD3_k127_2576957_0 Belongs to the UPF0061 (SELO) family K08997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 566.0
DYD3_k127_2576957_1 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 526.0
DYD3_k127_2576957_10 Leucyl-tRNA synthetase, Domain 2 K01869 - 6.1.1.4 0.00000000000001519 80.0
DYD3_k127_2576957_2 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 501.0
DYD3_k127_2576957_3 Acetolactate synthase K00156,K01652 - 1.2.5.1,2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006354 469.0
DYD3_k127_2576957_4 GMC oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005163 373.0
DYD3_k127_2576957_5 H( )-stimulated, divalent metal cation uptake system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001316 372.0
DYD3_k127_2576957_6 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 0.00000000000000000000000000000000000000000000000000000000000000000000004004 244.0
DYD3_k127_2576957_7 PFAM aminotransferase class V - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003541 256.0
DYD3_k127_2576957_8 Protein of unknown function (DUF502) - - - 0.000000000000000000000000000000000000000000002856 178.0
DYD3_k127_2576957_9 chemotaxis protein - - - 0.000000000000000000000006103 117.0
DYD3_k127_2588148_0 TonB dependent receptor K02014 - - 1.319e-222 721.0
DYD3_k127_2588148_1 Alpha mannosidase, middle domain K01191 - 3.2.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009726 500.0
DYD3_k127_2588148_10 CHRD domain - - - 0.000000000000001802 84.0
DYD3_k127_2588148_11 PBS lyase HEAT-like repeat - - - 0.00000004138 66.0
DYD3_k127_2588148_12 - - - - 0.0002007 52.0
DYD3_k127_2588148_2 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003554 447.0
DYD3_k127_2588148_3 Protein of unknown function (DUF455) K11529 - 2.7.1.165 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005916 377.0
DYD3_k127_2588148_4 amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007285 349.0
DYD3_k127_2588148_5 Predicted membrane protein (DUF2231) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002398 270.0
DYD3_k127_2588148_6 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002761 261.0
DYD3_k127_2588148_7 PFAM metal-dependent phosphohydrolase, HD sub domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006784 260.0
DYD3_k127_2588148_8 Binding-protein-dependent transport system inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000002461 233.0
DYD3_k127_2588148_9 GHMP kinase - - - 0.000000000000000000000000000000000000000000000000000000003629 211.0
DYD3_k127_2610145_0 Acetyl xylan esterase (AXE1) - - - 3.005e-306 951.0
DYD3_k127_2610145_1 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 1.275e-241 755.0
DYD3_k127_2610145_10 Tellurite resistance protein TerB - - - 0.00000000000000000000000000000000000000000000000002752 191.0
DYD3_k127_2610145_11 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.00000000000000000000000000000000000002508 153.0
DYD3_k127_2610145_12 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.00000000000000000000000000000001715 138.0
DYD3_k127_2610145_13 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000001037 108.0
DYD3_k127_2610145_14 - - - - 0.000000000000000000001549 101.0
DYD3_k127_2610145_15 Molybdopterin guanine dinucleotide synthesis protein B K03753,K13818 - 2.7.7.77 0.000000000000000000009395 98.0
DYD3_k127_2610145_16 - - - - 0.0000000000000001449 91.0
DYD3_k127_2610145_17 - - - - 0.0000000000002144 78.0
DYD3_k127_2610145_19 - - - - 0.00003201 52.0
DYD3_k127_2610145_2 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 9.114e-199 632.0
DYD3_k127_2610145_3 neurotransmitter:sodium symporter activity K03308 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007653 550.0
DYD3_k127_2610145_4 Major facilitator K06902 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002069 444.0
DYD3_k127_2610145_5 Peptidase family M48 K03799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 337.0
DYD3_k127_2610145_6 PFAM Integral membrane protein TerC K05794 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002206 315.0
DYD3_k127_2610145_7 MoeA domain protein domain I and II K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004648 318.0
DYD3_k127_2610145_8 DHH family K06881 - 3.1.13.3,3.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009968 300.0
DYD3_k127_2610145_9 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000000000000000000000001176 229.0
DYD3_k127_2615553_0 all-trans-retinol 13,14-reductase activity K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005796 526.0
DYD3_k127_2615553_1 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001747 458.0
DYD3_k127_2615553_10 Pyridine nucleotide-disulphide oxidoreductase K05297 - 1.18.1.1 0.000000000000000000000000000000000001184 156.0
DYD3_k127_2615553_11 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000001513 152.0
DYD3_k127_2615553_12 Tellurite resistance protein TerB - - - 0.0000000000000000000000000000000004107 137.0
DYD3_k127_2615553_13 Psort location Cytoplasmic, score - - - 0.000000000000000000000000000006228 129.0
DYD3_k127_2615553_14 InterPro IPR007367 - - - 0.00000000000000000000001405 104.0
DYD3_k127_2615553_15 lactoylglutathione lyase activity - - - 0.000000000000004913 89.0
DYD3_k127_2615553_16 Ankyrin repeats (many copies) - - - 0.000000000151 74.0
DYD3_k127_2615553_17 TIGRFAM 40-residue YVTN family beta-propeller repeat protein - - - 0.000001128 54.0
DYD3_k127_2615553_2 amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004914 384.0
DYD3_k127_2615553_3 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006478 309.0
DYD3_k127_2615553_4 phosphate symporter K14683 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001361 287.0
DYD3_k127_2615553_5 Psort location CytoplasmicMembrane, score - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001 267.0
DYD3_k127_2615553_6 PFAM Acetyltransferase (GNAT) family K18815 - 2.3.1.82 0.0000000000000000000000000000000000000000002212 164.0
DYD3_k127_2615553_7 PhoU domain - - - 0.0000000000000000000000000000000000000000007576 165.0
DYD3_k127_2615553_8 protein conserved in cyanobacteria - - - 0.000000000000000000000000000000000000000001588 162.0
DYD3_k127_2615553_9 Nucleotidyl transferase AbiEii toxin, Type IV TA system - - - 0.0000000000000000000000000000000000000002608 164.0
DYD3_k127_2658908_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1225.0
DYD3_k127_2658908_1 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001869 328.0
DYD3_k127_2658908_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001755 297.0
DYD3_k127_2658908_3 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000007815 226.0
DYD3_k127_2658908_5 lactoylglutathione lyase activity - - - 0.0000000000000000000000000000000000006774 156.0
DYD3_k127_2658908_7 membrane protein (DUF2078) K08982 - - 0.000000000000000004005 86.0
DYD3_k127_2658908_8 Belongs to the P(II) protein family K03320 - - 0.00000003473 65.0
DYD3_k127_2735160_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 1.05e-228 723.0
DYD3_k127_2735160_1 neurotransmitter:sodium symporter activity K03308 - - 2.767e-196 621.0
DYD3_k127_2735160_10 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K06034 - 4.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004914 292.0
DYD3_k127_2735160_11 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002691 305.0
DYD3_k127_2735160_12 Belongs to the TPP enzyme family K13039 - 4.1.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008194 297.0
DYD3_k127_2735160_13 GIY-YIG type nucleases (URI domain) K03703 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007088 286.0
DYD3_k127_2735160_14 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000009828 255.0
DYD3_k127_2735160_15 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000111 235.0
DYD3_k127_2735160_16 - - - - 0.000000000000000000000000000000000000000000000000000000000007495 216.0
DYD3_k127_2735160_17 protein conserved in cyanobacteria - - - 0.000000000000000000000000000000000000000000001591 171.0
DYD3_k127_2735160_18 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.000000000000000000000000000000000000000002909 160.0
DYD3_k127_2735160_19 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000000000000000000000000000000007944 138.0
DYD3_k127_2735160_2 Cys/Met metabolism PLP-dependent enzyme K01758 - 4.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002809 509.0
DYD3_k127_2735160_20 Protein of unknown function (DUF2911) - - - 0.00000000000000000000000000000000001111 144.0
DYD3_k127_2735160_21 Acid phosphatase homologues K19302 - 3.6.1.27 0.0000000000000000000000000002046 127.0
DYD3_k127_2735160_22 ribonuclease activity - - - 0.000000000000000000000000001928 117.0
DYD3_k127_2735160_23 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000000000000000000000006911 111.0
DYD3_k127_2735160_24 - - - - 0.00000000000008147 84.0
DYD3_k127_2735160_25 Phosphoglucomutase/phosphomannomutase, C-terminal domain K01840 - 5.4.2.8 0.0001347 51.0
DYD3_k127_2735160_26 positive regulation of growth - - - 0.000611 46.0
DYD3_k127_2735160_3 COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and K03182 - 4.1.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002754 491.0
DYD3_k127_2735160_4 Phosphoglucomutase/phosphomannomutase, C-terminal domain K01840 - 5.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 469.0
DYD3_k127_2735160_5 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 425.0
DYD3_k127_2735160_6 Phosphoribosylglycinamide synthetase, C domain K01945 - 6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004287 381.0
DYD3_k127_2735160_7 Sodium:dicarboxylate symporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003149 377.0
DYD3_k127_2735160_8 HD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002413 344.0
DYD3_k127_2735160_9 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006508 312.0
DYD3_k127_2805146_0 Saccharopine dehydrogenase C-terminal domain K19064 - 1.4.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008654 452.0
DYD3_k127_2805146_1 diguanylate cyclase K02488 - 2.7.7.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000689 385.0
DYD3_k127_2805146_2 Asparaginase K01444 - 3.5.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 372.0
DYD3_k127_2805146_3 Peptidase family M1 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008843 339.0
DYD3_k127_2805146_4 Quinolinate phosphoribosyl transferase, N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008791 280.0
DYD3_k127_2805146_5 Threonine dehydratase K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000007136 256.0
DYD3_k127_2805146_6 Dienelactone hydrolase family K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000003184 197.0
DYD3_k127_2805146_7 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000000000000000000000000000000000000000001917 188.0
DYD3_k127_2805146_8 Surface antigen - - - 0.0003527 54.0
DYD3_k127_2805146_9 Tricorn protease homolog K08676 - - 0.0006769 52.0
DYD3_k127_2822757_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 2.954e-198 628.0
DYD3_k127_2822757_1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004305 423.0
DYD3_k127_2822757_2 Protein of unknown function (DUF1015) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008735 409.0
DYD3_k127_2822757_3 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000251 421.0
DYD3_k127_2822757_4 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K22110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006024 293.0
DYD3_k127_2822757_5 Involved in the tonB-independent uptake of proteins - - - 0.00000000000000000000000000000000000000000000000000000000003644 215.0
DYD3_k127_2822757_6 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.00000000000000000000000000000000000000001416 162.0
DYD3_k127_2822757_7 PFAM Fe-S metabolism associated K02426 - - 0.000000000000000000000000000000006365 133.0
DYD3_k127_2822757_8 Amidohydrolase family - - - 0.0000000000000000007326 90.0
DYD3_k127_2822757_9 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000006043 89.0
DYD3_k127_28309_0 Involved in galactofuranosyl biosynthesis converts UDO-GlcP to UDP-GalP catalytic activity UDP- glucopyranose UDP-galactopyranose - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004768 483.0
DYD3_k127_28309_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00066,K02472,K02474,K13015 - 1.1.1.132,1.1.1.136,1.1.1.336 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000223 430.0
DYD3_k127_28309_10 polysaccharide biosynthetic process - - - 0.000000000000000000000000000000000000000001051 180.0
DYD3_k127_28309_11 polysaccharide biosynthetic process - - - 0.000000000000000000000000000000000008323 155.0
DYD3_k127_28309_12 Methyltransferase domain - - - 0.00000000000000000000000004136 120.0
DYD3_k127_28309_13 polysaccharide biosynthetic process - - - 0.00000000000491 73.0
DYD3_k127_28309_14 glyoxalase - - - 0.00000000001272 75.0
DYD3_k127_28309_2 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007942 396.0
DYD3_k127_28309_3 COG1668 ABC-type Na efflux pump, permease component K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007357 355.0
DYD3_k127_28309_4 Membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001899 305.0
DYD3_k127_28309_5 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004107 287.0
DYD3_k127_28309_6 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009255 275.0
DYD3_k127_28309_7 Glycosyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000002331 235.0
DYD3_k127_28309_8 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000003437 190.0
DYD3_k127_28309_9 polysaccharide biosynthetic process - - - 0.00000000000000000000000000000000000000000005425 183.0
DYD3_k127_2849097_0 AcrB/AcrD/AcrF family K03296 - - 0.0 1315.0
DYD3_k127_2849097_1 4Fe-4S dicluster domain K00184 - - 4.418e-244 789.0
DYD3_k127_2849097_10 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 389.0
DYD3_k127_2849097_12 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000754 342.0
DYD3_k127_2849097_13 acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003032 338.0
DYD3_k127_2849097_14 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005471 321.0
DYD3_k127_2849097_15 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 303.0
DYD3_k127_2849097_16 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001308 294.0
DYD3_k127_2849097_17 Biotin-lipoyl like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003711 271.0
DYD3_k127_2849097_18 ATPase-coupled sulfate transmembrane transporter activity K15496 - - 0.00000000000000000000000000000000000000000000000000000000000000004533 236.0
DYD3_k127_2849097_19 SpoU rRNA Methylase family K02533,K15396 - 2.1.1.200 0.000000000000000000000000000000000000000000000000000000007067 208.0
DYD3_k127_2849097_2 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 5.408e-239 762.0
DYD3_k127_2849097_20 TOBE domain K11072 - 3.6.3.31 0.00000000000000000000000000000000000000000000000000000001514 220.0
DYD3_k127_2849097_21 NmrA-like family K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000005502 204.0
DYD3_k127_2849097_22 Pfam Polysulphide reductase, NrfD - - - 0.000000000000000000000000000000000000000000000000006253 198.0
DYD3_k127_2849097_23 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000000000000000000005375 181.0
DYD3_k127_2849097_24 Iron-storage protein K02217 - 1.16.3.2 0.000000000000000000000000000000000000000000000007498 180.0
DYD3_k127_2849097_25 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.00000000000000000000000000000000000000000000007368 187.0
DYD3_k127_2849097_26 Sigma-70 region 2 K03088 - - 0.00000000000000000000000000000000000000000005578 167.0
DYD3_k127_2849097_27 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000001876 145.0
DYD3_k127_2849097_28 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000008987 143.0
DYD3_k127_2849097_29 Sigma-70 region 2 K03088 - - 0.00000000000000000000000000000000005673 147.0
DYD3_k127_2849097_3 ABC transporter transmembrane region K11085 - - 2.19e-233 739.0
DYD3_k127_2849097_30 PFAM peptidase M6, immune inhibitor A - - - 0.0000000000000000000000000000000005081 151.0
DYD3_k127_2849097_31 Protein of unknown function (DUF3341) - - - 0.00000000000000000000000000000003192 133.0
DYD3_k127_2849097_32 transcriptional regulator - - - 0.0000000000000000000000000000003359 132.0
DYD3_k127_2849097_33 phosphatidate phosphatase activity K00901,K01096,K19302 - 2.7.1.107,3.1.3.27,3.1.3.4,3.1.3.81,3.6.1.27 0.000000000000000000000000000001802 132.0
DYD3_k127_2849097_34 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000000001111 123.0
DYD3_k127_2849097_35 Copper binding proteins, plastocyanin/azurin family K02638 - - 0.0000000000000000000000000003547 120.0
DYD3_k127_2849097_36 1,4-alpha-glucan branching enzyme activity K00700 - 2.4.1.18 0.000000000000000000000000000958 120.0
DYD3_k127_2849097_37 Putative adhesin - - - 0.0000000000000000000000002718 116.0
DYD3_k127_2849097_38 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000002384 98.0
DYD3_k127_2849097_39 - - - - 0.000000000000101 78.0
DYD3_k127_2849097_4 Amidohydrolase family K06015 - 3.5.1.81 4.69e-224 708.0
DYD3_k127_2849097_42 Anti-sigma-K factor rskA - - - 0.00017 53.0
DYD3_k127_2849097_43 antigen processing and presentation, endogenous lipid antigen via MHC class Ib K06448 GO:0000323,GO:0001775,GO:0001817,GO:0001819,GO:0001865,GO:0001910,GO:0001912,GO:0001914,GO:0001916,GO:0002376,GO:0002475,GO:0002520,GO:0002521,GO:0002682,GO:0002684,GO:0002694,GO:0002696,GO:0002697,GO:0002699,GO:0002703,GO:0002705,GO:0002706,GO:0002708,GO:0002709,GO:0002711,GO:0002819,GO:0002821,GO:0002822,GO:0002824,GO:0003674,GO:0003823,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005768,GO:0005769,GO:0005770,GO:0005773,GO:0005783,GO:0005886,GO:0005887,GO:0007155,GO:0007275,GO:0008150,GO:0008284,GO:0008289,GO:0009595,GO:0009605,GO:0009607,GO:0009617,GO:0009889,GO:0009891,GO:0009893,GO:0009897,GO:0009986,GO:0009987,GO:0010556,GO:0010557,GO:0010604,GO:0012505,GO:0016020,GO:0016021,GO:0016045,GO:0019222,GO:0019882,GO:0019883,GO:0019884,GO:0022407,GO:0022409,GO:0022610,GO:0030097,GO:0030098,GO:0030154,GO:0030155,GO:0030217,GO:0030881,GO:0030882,GO:0030883,GO:0030884,GO:0031224,GO:0031226,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031341,GO:0031343,GO:0031347,GO:0031349,GO:0031410,GO:0031982,GO:0032501,GO:0032502,GO:0032649,GO:0032663,GO:0032673,GO:0032729,GO:0032743,GO:0032753,GO:0032944,GO:0032946,GO:0033077,GO:0033081,GO:0033083,GO:0033084,GO:0033218,GO:0034113,GO:0042035,GO:0042102,GO:0042108,GO:0042110,GO:0042127,GO:0042129,GO:0042277,GO:0042393,GO:0042608,GO:0043030,GO:0043032,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043368,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0044877,GO:0045058,GO:0045059,GO:0045061,GO:0045072,GO:0045076,GO:0045078,GO:0045086,GO:0045088,GO:0045089,GO:0045321,GO:0045402,GO:0045404,GO:0045580,GO:0045582,GO:0045595,GO:0045597,GO:0045619,GO:0045621,GO:0045785,GO:0046631,GO:0046632,GO:0046634,GO:0046635,GO:0046637,GO:0046638,GO:0046649,GO:0048003,GO:0048006,GO:0048007,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048583,GO:0048584,GO:0048731,GO:0048856,GO:0048869,GO:0050670,GO:0050671,GO:0050776,GO:0050778,GO:0050789,GO:0050793,GO:0050794,GO:0050839,GO:0050863,GO:0050865,GO:0050867,GO:0050870,GO:0050896,GO:0051094,GO:0051133,GO:0051135,GO:0051136,GO:0051138,GO:0051171,GO:0051173,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051249,GO:0051251,GO:0051606,GO:0051704,GO:0051707,GO:0060255,GO:0065007,GO:0070663,GO:0070665,GO:0071723,GO:0071944,GO:0080090,GO:0080134,GO:0097708,GO:0098543,GO:0098552,GO:0098581,GO:0098609,GO:1902105,GO:1902107,GO:1903037,GO:1903039,GO:1903706,GO:1903708,GO:2000026 - 0.0004604 43.0
DYD3_k127_2849097_5 Penicillin amidase K01434 - 3.5.1.11 5.486e-215 709.0
DYD3_k127_2849097_6 Acyl-CoA dehydrogenase, N-terminal domain - - - 4.739e-209 666.0
DYD3_k127_2849097_7 Polysulphide reductase, NrfD K00185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 531.0
DYD3_k127_2849097_8 Type II/IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005129 533.0
DYD3_k127_2849097_9 Beta-eliminating lyase K00639,K00652 GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 2.3.1.29,2.3.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009024 492.0
DYD3_k127_2876112_0 Isocitrate lyase K01637 - 4.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008232 574.0
DYD3_k127_2876112_1 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.000000000000000000000000000000000000000000000221 175.0
DYD3_k127_2876112_3 - - - - 0.00000000000009228 78.0
DYD3_k127_2876112_4 Sigma-70, region 4 K03088 - - 0.000000000001483 71.0
DYD3_k127_2876112_5 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000001045 55.0
DYD3_k127_2876112_6 Malate synthase K01638 - 2.3.3.9 0.0002075 48.0
DYD3_k127_2908113_0 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 1.61e-208 656.0
DYD3_k127_2908113_1 PFAM Amino acid permease K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 511.0
DYD3_k127_2908113_10 Iron-sulphur cluster biosynthesis - - - 0.0000000000000000000000000000000000000001322 153.0
DYD3_k127_2908113_11 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.00000000000000000000000000000000000001051 154.0
DYD3_k127_2908113_12 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate K07106 - 4.2.1.126 0.000000000000000000000000001781 126.0
DYD3_k127_2908113_13 - - - - 0.0000000000000000000003601 99.0
DYD3_k127_2908113_14 - - - - 0.0000000000000000761 86.0
DYD3_k127_2908113_15 - - - - 0.00000000000001001 83.0
DYD3_k127_2908113_16 Phosphate transporter family K03306 - - 0.0000000000002871 70.0
DYD3_k127_2908113_2 Transketolase, pyrimidine binding domain K00167,K11381,K21417 - 1.2.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000191 489.0
DYD3_k127_2908113_3 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161,K11381,K21416 - 1.2.4.1,1.2.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002983 422.0
DYD3_k127_2908113_4 Sodium:solute symporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001769 403.0
DYD3_k127_2908113_5 e3 binding domain K00658 - 2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001728 399.0
DYD3_k127_2908113_6 Glycosyl hydrolase family 3 C-terminal domain K01207 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004296 409.0
DYD3_k127_2908113_7 Protein of unknown function (DUF1343) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004732 327.0
DYD3_k127_2908113_8 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008727 289.0
DYD3_k127_2908113_9 DNA polymerase alpha chain like domain K07053 - 3.1.3.97 0.000000000000000000000000000000000000000000000000000000000000001021 228.0
DYD3_k127_2952555_0 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005718 334.0
DYD3_k127_2952555_1 - - - - 0.0000000000005931 76.0
DYD3_k127_3003022_0 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000785 393.0
DYD3_k127_3003022_1 Domain of unknown function (DUF4159) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009285 315.0
DYD3_k127_3003022_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001284 267.0
DYD3_k127_3003022_3 Serine Threonine protein kinase - - - 0.000000000000000000000000000000000000001689 153.0
DYD3_k127_3003022_4 Penicillinase repressor - - - 0.00000000000000000000000000000003021 130.0
DYD3_k127_3003022_5 PFAM glycosyl transferase family 9 - - - 0.0000000000000000000153 93.0
DYD3_k127_3003022_6 - - - - 0.00002959 54.0
DYD3_k127_3052663_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 4.466e-208 673.0
DYD3_k127_3052663_1 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000004324 80.0
DYD3_k127_3066404_0 Heat shock 70 kDa protein K04043 - - 5.052e-314 974.0
DYD3_k127_3066404_1 alginic acid biosynthetic process - - - 4.908e-213 686.0
DYD3_k127_3066404_10 OmpA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003691 284.0
DYD3_k127_3066404_11 Glycosyltransferase family 28 C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001999 256.0
DYD3_k127_3066404_12 Glycosyl transferase 4-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000005862 239.0
DYD3_k127_3066404_13 - - - - 0.00000000000000000000000000000000000000000003097 168.0
DYD3_k127_3066404_14 lipolytic protein G-D-S-L family - - - 0.0000000000000002046 90.0
DYD3_k127_3066404_15 methyltransferase K02169 - 2.1.1.197 0.00000000000005563 84.0
DYD3_k127_3066404_16 BNR repeat-containing family member - - - 0.0000000000002004 79.0
DYD3_k127_3066404_17 Phosphotransferase enzyme family - - - 0.0000000001625 75.0
DYD3_k127_3066404_2 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 2.313e-212 665.0
DYD3_k127_3066404_3 ABC-type multidrug transport system ATPase and permease K06147 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 425.0
DYD3_k127_3066404_4 PFAM Glycosyltransferase family 28 C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008024 370.0
DYD3_k127_3066404_5 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003485 367.0
DYD3_k127_3066404_6 COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003454 357.0
DYD3_k127_3066404_7 Trypsin K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 320.0
DYD3_k127_3066404_8 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002117 280.0
DYD3_k127_3066404_9 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001829 286.0
DYD3_k127_3105997_0 Subtilase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004208 537.0
DYD3_k127_3105997_1 Polysulphide reductase, NrfD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000138 502.0
DYD3_k127_3105997_10 Polysaccharide lyase family 4, domain II - - - 0.0000000000000000000000006325 113.0
DYD3_k127_3105997_11 Cytochrome c7 and related cytochrome c - - - 0.000000000000000000000009019 107.0
DYD3_k127_3105997_12 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000000756 94.0
DYD3_k127_3105997_13 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000003011 81.0
DYD3_k127_3105997_15 PFAM glycoside hydrolase family 39 - - - 0.0000002006 64.0
DYD3_k127_3105997_16 Cytochrome c - - - 0.00006374 53.0
DYD3_k127_3105997_2 Two component, sigma54 specific, transcriptional regulator, Fis family K07714 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007581 425.0
DYD3_k127_3105997_3 Molydopterin dinucleotide binding domain K08352 - 1.8.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003567 411.0
DYD3_k127_3105997_4 4Fe-4S dicluster domain K00184 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007479 327.0
DYD3_k127_3105997_5 Cytochrome c K00413 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004384 291.0
DYD3_k127_3105997_6 long-chain fatty acid transporting porin activity K07267 - - 0.00000000000000000000000000000000000000000000000000000000001152 225.0
DYD3_k127_3105997_7 protein import - - - 0.000000000000000000000000000000000000000000008276 186.0
DYD3_k127_3105997_8 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000002756 179.0
DYD3_k127_3105997_9 - - - - 0.00000000000000000000000009661 114.0
DYD3_k127_3143645_0 PFAM peptidase S9A prolyl oligopeptidase domain protein beta-propeller K01354 - 3.4.21.83 1.85e-221 706.0
DYD3_k127_3143645_1 COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 315.0
DYD3_k127_3143645_2 Sulfite exporter TauE/SafE - - - 0.00000000000000000000000000000000006019 139.0
DYD3_k127_3143645_3 - - - - 0.00000000000005109 78.0
DYD3_k127_3193359_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951,K01139 - 2.7.6.5,3.1.7.2 0.000000000000000000000000000000000000000000002749 169.0
DYD3_k127_3193359_1 Protein conserved in bacteria - - - 0.000000000000000000000000000001382 137.0
DYD3_k127_3193359_2 Zincin-like metallopeptidase K00930 - 2.7.2.8 0.00000000000000000000000003488 112.0
DYD3_k127_3193359_3 Belongs to the N(4) N(6)-methyltransferase family K00571 - 2.1.1.72 0.0000000000000004197 79.0
DYD3_k127_3213013_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003081 345.0
DYD3_k127_3213013_1 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000000000002905 186.0
DYD3_k127_3213013_2 PFAM flavin reductase domain protein, FMN-binding - - - 0.0000000000000000000000000000000002886 143.0
DYD3_k127_3213013_3 Glucose inhibited division protein A K21401 - 1.3.99.38 0.0000000000000000000000000000003545 127.0
DYD3_k127_3213013_4 Methyltransferase domain - - - 0.00000000000000000004008 105.0
DYD3_k127_3265015_0 LVIVD repeat - - - 7.36e-277 865.0
DYD3_k127_3265015_1 protein kinase activity - - - 1.548e-225 735.0
DYD3_k127_3265015_10 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001908 499.0
DYD3_k127_3265015_11 Amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001869 488.0
DYD3_k127_3265015_12 Multicopper oxidase K22348 - 1.16.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 473.0
DYD3_k127_3265015_13 ATP-grasp domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 410.0
DYD3_k127_3265015_14 HD domain K07814 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003055 374.0
DYD3_k127_3265015_15 peptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005239 376.0
DYD3_k127_3265015_16 PFAM Alcohol dehydrogenase zinc-binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008202 319.0
DYD3_k127_3265015_17 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003426 321.0
DYD3_k127_3265015_18 Domain of Unknown Function (DUF1080) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000022 272.0
DYD3_k127_3265015_19 Belongs to the arginase family K01480 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008216,GO:0008295,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0016787,GO:0016810,GO:0016813,GO:0034641,GO:0042401,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576 3.5.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000003258 256.0
DYD3_k127_3265015_2 Sodium:solute symporter family - - - 4.827e-219 695.0
DYD3_k127_3265015_20 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.000000000000000000000000000000000000000000000000000000000001137 222.0
DYD3_k127_3265015_21 PHP domain protein - - - 0.0000000000000000000000000000000000000000000000000000000299 202.0
DYD3_k127_3265015_22 - - - - 0.000000000000000000000000000000000000000000000008357 196.0
DYD3_k127_3265015_23 Peptidase family S41 - - - 0.000000000000000000000000000000000000000000002547 177.0
DYD3_k127_3265015_24 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000000000000000000000000000003088 173.0
DYD3_k127_3265015_25 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000000000000005722 166.0
DYD3_k127_3265015_26 ADP-glyceromanno-heptose 6-epimerase activity - - - 0.0000000000000000000000000000000000000000000958 164.0
DYD3_k127_3265015_27 Belongs to the GHMP kinase family. GalK subfamily K00849 - 2.7.1.6 0.0000000000000000000000000000000000000000001124 177.0
DYD3_k127_3265015_28 RES - - - 0.0000000000000000000000000000000000000000004886 161.0
DYD3_k127_3265015_29 - - - - 0.00000000000000000000000000000000000004548 155.0
DYD3_k127_3265015_3 Aldehyde dehydrogenase family K00128,K00135 - 1.2.1.16,1.2.1.20,1.2.1.3,1.2.1.79 7.724e-197 623.0
DYD3_k127_3265015_30 Erythromycin esterase K06880 - - 0.0000000000000000000000000000004212 141.0
DYD3_k127_3265015_31 - K00003,K00058,K01754,K04767 - 1.1.1.3,1.1.1.399,1.1.1.95,4.3.1.19 0.00000000000000000000000000002126 129.0
DYD3_k127_3265015_32 Protein of unknown function (DUF2384) - - - 0.0000000000000000000000000004531 123.0
DYD3_k127_3265015_33 3-demethylubiquinone-9 3-O-methyltransferase activity K03428 - 2.1.1.11 0.00000000000000000000000001606 120.0
DYD3_k127_3265015_34 Protein of unknown function DUF86 - - - 0.0000000000000000000000008555 108.0
DYD3_k127_3265015_35 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000004487 112.0
DYD3_k127_3265015_36 PFAM TonB-dependent Receptor Plug - - - 0.000000000000000001803 101.0
DYD3_k127_3265015_37 Nucleotidyltransferase domain K07075 - - 0.000000000000000005508 91.0
DYD3_k127_3265015_38 Belongs to the sigma-70 factor family. ECF subfamily - - - 0.000000000006841 75.0
DYD3_k127_3265015_39 - - - - 0.00000000001368 70.0
DYD3_k127_3265015_4 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000528 643.0
DYD3_k127_3265015_40 cAMP biosynthetic process - - - 0.00000000006168 72.0
DYD3_k127_3265015_41 NAD(P)H-dependent FMN reductase - - - 0.000000000215 73.0
DYD3_k127_3265015_42 - - - - 0.00000002188 61.0
DYD3_k127_3265015_43 - - - - 0.0000003299 59.0
DYD3_k127_3265015_44 Protein kinase domain K12132 - 2.7.11.1 0.00002085 49.0
DYD3_k127_3265015_45 PFAM Cupin 2, conserved barrel - - - 0.00005332 54.0
DYD3_k127_3265015_5 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 610.0
DYD3_k127_3265015_6 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001564 595.0
DYD3_k127_3265015_7 Pyridine nucleotide-disulphide oxidoreductase K05297 - 1.18.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 560.0
DYD3_k127_3265015_8 Luciferase-like monooxygenase K17228 - 1.14.14.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002494 514.0
DYD3_k127_3265015_9 Peptidase family M28 K06016 - 3.5.1.6,3.5.1.87 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 499.0
DYD3_k127_3299884_0 TonB-dependent receptor - - - 0.0 1382.0
DYD3_k127_3299884_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 1.718e-276 884.0
DYD3_k127_3299884_10 Predicted permease YjgP/YjgQ family K11720 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003009 295.0
DYD3_k127_3299884_11 Conserved hypothetical protein (DUF2461) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001559 279.0
DYD3_k127_3299884_12 Cytochrome C oxidase, cbb3-type, subunit III K19713 - 1.8.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000003039 269.0
DYD3_k127_3299884_13 Predicted permease YjgP/YjgQ family K07091 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004791 284.0
DYD3_k127_3299884_14 Peptidase M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000004171 239.0
DYD3_k127_3299884_15 S4 RNA-binding domain K04762 - - 0.0000000000000000000000000000000000001933 147.0
DYD3_k127_3299884_16 Acetyltransferase (GNAT) domain K00619 - 2.3.1.1 0.00000000000000000000000000000000002329 142.0
DYD3_k127_3299884_17 - - - - 0.0000000000000000000000000000002294 136.0
DYD3_k127_3299884_18 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.0000000000000000000000000002478 117.0
DYD3_k127_3299884_19 - - - - 0.0000000000000000000000004136 119.0
DYD3_k127_3299884_2 Type II secretion system (T2SS), protein E, N-terminal domain K02652 - - 2.758e-230 729.0
DYD3_k127_3299884_20 Prokaryotic N-terminal methylation motif - - - 0.0000000000000000000000009095 108.0
DYD3_k127_3299884_21 Prokaryotic N-terminal methylation motif K02456,K02650,K02655 - - 0.0000000000000000000002181 101.0
DYD3_k127_3299884_22 TIGRFAM competence protein ComEA helix-hairpin-helix repeat K02237 - - 0.00000000000000000007275 98.0
DYD3_k127_3299884_23 Domain of unknown function (DUF4142) K08995 - - 0.000000000723 69.0
DYD3_k127_3299884_3 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006103 612.0
DYD3_k127_3299884_4 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003626 595.0
DYD3_k127_3299884_5 Type II secretion system (T2SS), protein F K02653 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004226 522.0
DYD3_k127_3299884_6 PFAM amino acid permease-associated region K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007466 411.0
DYD3_k127_3299884_7 PAS domain K02668 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000138 349.0
DYD3_k127_3299884_8 ubiE/COQ5 methyltransferase family K07755 - 2.1.1.137 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002067 308.0
DYD3_k127_3299884_9 Metallopeptidase family M24 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005927 307.0
DYD3_k127_3305584_0 Catalyzes the attachment of glycine to tRNA(Gly) K01880 - 6.1.1.14 9.203e-212 666.0
DYD3_k127_3305584_1 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005753 556.0
DYD3_k127_3305584_10 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000000000000000000000000000000000111 178.0
DYD3_k127_3305584_11 Binds to the 23S rRNA K02876 - - 0.000000000000000000000000000000000000001783 151.0
DYD3_k127_3305584_12 - - - - 0.0000000000000000000005504 106.0
DYD3_k127_3305584_13 Ribosomal protein L30p/L7e K02907 - - 0.00000000000000003384 85.0
DYD3_k127_3305584_14 Zincin-like metallopeptidase - - - 0.0000000000000006162 91.0
DYD3_k127_3305584_2 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 498.0
DYD3_k127_3305584_3 tRNA synthetases class I (W and Y) K01867 - 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002365 423.0
DYD3_k127_3305584_4 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009255 376.0
DYD3_k127_3305584_5 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006386 367.0
DYD3_k127_3305584_6 Metallopeptidase family M24 K01265 - 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000176 343.0
DYD3_k127_3305584_7 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000001164 265.0
DYD3_k127_3305584_8 Inositol monophosphatase family K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000006599 231.0
DYD3_k127_3305584_9 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.000000000000000000000000000000000000000000000000000000001391 211.0
DYD3_k127_3320480_0 PQQ-like domain K00117 - 1.1.5.2 0.0 1189.0
DYD3_k127_3320480_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 8.3e-322 999.0
DYD3_k127_3320480_10 peroxiredoxin activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006264 384.0
DYD3_k127_3320480_11 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007303 377.0
DYD3_k127_3320480_12 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003795 378.0
DYD3_k127_3320480_13 Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group K02259 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003093 336.0
DYD3_k127_3320480_14 exodeoxyribonuclease III K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002786 324.0
DYD3_k127_3320480_15 DinB superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002506 285.0
DYD3_k127_3320480_16 L-lysine 6-monooxygenase (NADPH-requiring) K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000314 280.0
DYD3_k127_3320480_17 Amidinotransferase K01482 - 3.5.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000002668 263.0
DYD3_k127_3320480_18 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000005235 261.0
DYD3_k127_3320480_19 DinB superfamily - - - 0.0000000000000000000000000000000000000000000000000000000002145 210.0
DYD3_k127_3320480_2 Peptidase family M1 domain K01256 - 3.4.11.2 2.98e-242 775.0
DYD3_k127_3320480_20 PFAM Aminotransferase class I and II K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000001479 209.0
DYD3_k127_3320480_22 Putative zinc- or iron-chelating domain K06940 - - 0.00000000000000000000000000000000000000000006348 170.0
DYD3_k127_3320480_23 LytTr DNA-binding domain K02477 - - 0.0000000000000000000000000000000000000000003575 177.0
DYD3_k127_3320480_24 - - - - 0.0000000000000000000000000000000000000001256 158.0
DYD3_k127_3320480_25 Zinc carboxypeptidase - - - 0.000000000000000000000000000000000000001441 148.0
DYD3_k127_3320480_26 SnoaL-like polyketide cyclase - - - 0.000000000000000000000000000000000000004816 153.0
DYD3_k127_3320480_27 - - - - 0.000000000000000000000000000000000007331 147.0
DYD3_k127_3320480_28 PFAM OsmC family protein - - - 0.0000000000000000000000000000006863 127.0
DYD3_k127_3320480_29 HupE / UreJ protein - - - 0.0000000000000000000000001405 114.0
DYD3_k127_3320480_3 amine dehydrogenase activity - - - 1.824e-201 634.0
DYD3_k127_3320480_30 HupE / UreJ protein - - - 0.000000000000000000000000289 121.0
DYD3_k127_3320480_31 Lanthionine synthetase C family protein - - - 0.000000000000000000000009068 111.0
DYD3_k127_3320480_32 Dodecin K09165 - - 0.0000000000000000001575 89.0
DYD3_k127_3320480_34 peptidase activity, acting on L-amino acid peptides K07004,K09955,K12567,K21449 - 2.7.11.1 0.000000001009 70.0
DYD3_k127_3320480_35 - - - - 0.00000001443 63.0
DYD3_k127_3320480_36 glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000001513 59.0
DYD3_k127_3320480_37 CAAX protease self-immunity - - - 0.00001482 56.0
DYD3_k127_3320480_38 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate - - - 0.0003634 47.0
DYD3_k127_3320480_39 Domain of unknown function (DUF4685) - - - 0.0005852 48.0
DYD3_k127_3320480_4 Glucose dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003721 591.0
DYD3_k127_3320480_5 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008562 573.0
DYD3_k127_3320480_6 HupE / UreJ protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001595 507.0
DYD3_k127_3320480_7 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005276 482.0
DYD3_k127_3320480_8 chaperone-mediated protein folding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 432.0
DYD3_k127_3320480_9 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 391.0
DYD3_k127_3353559_0 - - - - 0.000000000000000000000000000007023 130.0
DYD3_k127_3353559_1 Tetratricopeptide repeat - - - 0.0000000000000000000006563 111.0
DYD3_k127_3378113_0 Amidohydrolase family - - - 0.0 1168.0
DYD3_k127_3378113_1 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 1.247e-299 931.0
DYD3_k127_3378113_10 Rossmann fold nucleotide-binding protein K06966 - 3.2.2.10 0.000000000000000000000000000000001284 136.0
DYD3_k127_3378113_11 Domain of unknown function (DUF4136) - - - 0.00000000000000000001677 102.0
DYD3_k127_3378113_2 major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000899 473.0
DYD3_k127_3378113_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006472 468.0
DYD3_k127_3378113_4 Mediates influx of magnesium ions K03284 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009231 396.0
DYD3_k127_3378113_5 sodium:proton antiporter activity K03316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003527 302.0
DYD3_k127_3378113_6 O-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004221 267.0
DYD3_k127_3378113_7 PFAM sodium hydrogen exchanger K03316 - - 0.0000000000000000000000000000000000000008637 164.0
DYD3_k127_3378113_8 mechanosensitive ion channel - - - 0.0000000000000000000000000000000000003716 152.0
DYD3_k127_3378113_9 COG0668 Small-conductance mechanosensitive channel - - - 0.000000000000000000000000000000000001431 142.0
DYD3_k127_3388529_0 Belongs to the formate--tetrahydrofolate ligase family K01938 - 6.3.4.3 1.389e-216 689.0
DYD3_k127_3388529_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009008 369.0
DYD3_k127_3388529_10 - - - - 0.000000000001683 76.0
DYD3_k127_3388529_2 Riboflavin kinase K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002793 323.0
DYD3_k127_3388529_3 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002446 312.0
DYD3_k127_3388529_4 TatD related DNase K03424 - - 0.0000000000000000000000000000000000000000000000000000000000000001285 230.0
DYD3_k127_3388529_5 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.000000000000000000000000000000000000000000000000000000001419 224.0
DYD3_k127_3388529_6 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177,K03483 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.00000000000000000000000000000000000000000000000000009148 198.0
DYD3_k127_3388529_7 PFAM Endoribonuclease L-PSP K09022 - 3.5.99.10 0.00000000000000000000000000000000000006159 151.0
DYD3_k127_3388529_8 Thioesterase-like superfamily K07107 - - 0.00000000000000000000000000000001014 132.0
DYD3_k127_3388529_9 Calcineurin-like phosphoesterase K03269 - 3.6.1.54 0.00000000000000000000000000001971 130.0
DYD3_k127_3433225_0 - - - - 0.0 1117.0
DYD3_k127_3433225_1 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 0.0 1085.0
DYD3_k127_3433225_10 amidohydrolase K03392 - 4.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004963 441.0
DYD3_k127_3433225_11 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008193 440.0
DYD3_k127_3433225_12 Tetratricopeptide repeat K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005234 429.0
DYD3_k127_3433225_13 Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family K03317 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003227 412.0
DYD3_k127_3433225_14 Ppx/GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004024 407.0
DYD3_k127_3433225_15 TIGRFAM phosphate ABC transporter, phosphate-binding protein K02040 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 374.0
DYD3_k127_3433225_16 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008823 390.0
DYD3_k127_3433225_17 HAMP domain K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008515 355.0
DYD3_k127_3433225_18 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000165 336.0
DYD3_k127_3433225_19 Adenosine/AMP deaminase K01488 - 3.5.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000216 336.0
DYD3_k127_3433225_2 peptidase S9B dipeptidylpeptidase IV domain protein - - - 6.594e-302 953.0
DYD3_k127_3433225_20 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005789 329.0
DYD3_k127_3433225_21 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 335.0
DYD3_k127_3433225_22 stress, protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002383 313.0
DYD3_k127_3433225_23 Dioxygenase K00449 - 1.13.11.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006966 309.0
DYD3_k127_3433225_24 Transcriptional regulatory protein, C terminal K07657 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 301.0
DYD3_k127_3433225_25 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001733 319.0
DYD3_k127_3433225_26 Beta-lactamase enzyme family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003139 300.0
DYD3_k127_3433225_27 Rhomboid family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008918 287.0
DYD3_k127_3433225_28 TIGRFAM phosphate ABC transporter K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001419 287.0
DYD3_k127_3433225_29 phosphorelay signal transduction system K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001614 298.0
DYD3_k127_3433225_3 Domain of unknown function (DUF5117) - - - 1.007e-270 865.0
DYD3_k127_3433225_30 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000000001496 276.0
DYD3_k127_3433225_31 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000001941 265.0
DYD3_k127_3433225_32 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.00000000000000000000000000000000000000000000000000000000000000000000000004753 271.0
DYD3_k127_3433225_33 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.00000000000000000000000000000000000000000000000000000000000000006574 231.0
DYD3_k127_3433225_34 negative regulation of phosphate transmembrane transport K02039 GO:0000287,GO:0001558,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006873,GO:0006950,GO:0007154,GO:0008150,GO:0009266,GO:0009267,GO:0009268,GO:0009405,GO:0009408,GO:0009605,GO:0009628,GO:0009892,GO:0009987,GO:0009991,GO:0010468,GO:0010563,GO:0010605,GO:0010629,GO:0010966,GO:0016020,GO:0016036,GO:0019220,GO:0019222,GO:0019725,GO:0019897,GO:0019898,GO:0022898,GO:0030002,GO:0030145,GO:0030320,GO:0030643,GO:0031323,GO:0031324,GO:0031667,GO:0031668,GO:0031669,GO:0032409,GO:0032410,GO:0032412,GO:0032413,GO:0032879,GO:0033554,GO:0034605,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0040008,GO:0042221,GO:0042592,GO:0042594,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0043269,GO:0043271,GO:0044070,GO:0044092,GO:0044419,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045936,GO:0046677,GO:0046872,GO:0046914,GO:0046983,GO:0048519,GO:0048523,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050896,GO:0051049,GO:0051051,GO:0051128,GO:0051174,GO:0051704,GO:0051716,GO:0055062,GO:0055081,GO:0055082,GO:0055083,GO:0060255,GO:0065007,GO:0065008,GO:0065009,GO:0070887,GO:0071214,GO:0071236,GO:0071467,GO:0071496,GO:0071944,GO:0072501,GO:0072502,GO:0072505,GO:0072506,GO:0098771,GO:0104004,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 - 0.0000000000000000000000000000000000000000000000000000000000000002706 229.0
DYD3_k127_3433225_35 Zn peptidase - - - 0.00000000000000000000000000000000000000000000000000000000006852 221.0
DYD3_k127_3433225_36 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000003141 203.0
DYD3_k127_3433225_37 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000001417 186.0
DYD3_k127_3433225_38 WD40-like Beta Propeller Repeat K03641 - - 0.000000000000000000000000000000000000000000000001327 186.0
DYD3_k127_3433225_39 RNA 2'-O ribose methyltransferase substrate binding K03437 - - 0.00000000000000000000000000000000000000000000007235 189.0
DYD3_k127_3433225_4 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002229 584.0
DYD3_k127_3433225_40 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K03741 - 1.20.4.1 0.0000000000000000000000000000000000000000000005785 172.0
DYD3_k127_3433225_41 ECF sigma factor - - - 0.000000000000000000000000000000000000000000001179 175.0
DYD3_k127_3433225_42 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000009613 154.0
DYD3_k127_3433225_43 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000001036 172.0
DYD3_k127_3433225_44 phosphoribosyltransferase K07100 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000003476 154.0
DYD3_k127_3433225_45 Protein of unknown function (DUF445) - - - 0.0000000000000000000000001983 122.0
DYD3_k127_3433225_47 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.000000000000000000000007396 104.0
DYD3_k127_3433225_48 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.000000000000000002023 100.0
DYD3_k127_3433225_49 membrane - - - 0.0000000000000001189 89.0
DYD3_k127_3433225_5 alanine symporter K03310 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001775 576.0
DYD3_k127_3433225_50 response to cobalt ion - - - 0.000000000000006383 79.0
DYD3_k127_3433225_52 - - - - 0.00000000003559 75.0
DYD3_k127_3433225_53 DNA-binding transcription factor activity K03892 GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031326,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042221,GO:0043170,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0046685,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1903506,GO:2000112,GO:2001141 - 0.000000001045 67.0
DYD3_k127_3433225_54 - - - - 0.000000006353 64.0
DYD3_k127_3433225_55 Protein kinase domain K12132 - 2.7.11.1 0.00000001267 61.0
DYD3_k127_3433225_57 DNA integration K14059 - - 0.000002012 55.0
DYD3_k127_3433225_58 - - - - 0.0000361 57.0
DYD3_k127_3433225_59 - - - - 0.0007543 53.0
DYD3_k127_3433225_6 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007317 570.0
DYD3_k127_3433225_7 Penicillin amidase K01434 - 3.5.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000509 524.0
DYD3_k127_3433225_8 deoxyribose-phosphate aldolase activity K01619 - 4.1.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003242 493.0
DYD3_k127_3433225_9 amino acid K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 482.0
DYD3_k127_3445879_0 peptidase M24 - - - 0.000000000000000000000000000000000000000000000000000000005159 205.0
DYD3_k127_3445879_1 Isochorismatase family - - - 0.00000000000000000000000000000000000000000000001442 177.0
DYD3_k127_3448132_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 5.892e-195 621.0
DYD3_k127_3448132_1 Glucose / Sorbosone dehydrogenase K21430 - - 0.0000000000000000000000000001558 125.0
DYD3_k127_3495306_0 Belongs to the glycosyl hydrolase 5 (cellulase A) family - - - 0.0 1031.0
DYD3_k127_3495306_1 Cyclomaltodextrinase, N-terminal K21575 - 3.2.1.135 9.175e-282 877.0
DYD3_k127_3495306_2 hydrolase activity, hydrolyzing O-glycosyl compounds K01176,K01200 - 3.2.1.1,3.2.1.41 3.173e-234 734.0
DYD3_k127_3495306_3 MFS/sugar transport protein K16211 - - 4.784e-218 683.0
DYD3_k127_3495306_4 N,N-dimethylaniline monooxygenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004563 286.0
DYD3_k127_3495306_5 Putative esterase - - - 0.0000000000000000000000000000000000000000000000000000000001556 217.0
DYD3_k127_3495306_6 Putative restriction endonuclease - - - 0.00001808 52.0
DYD3_k127_3499377_0 Zinc carboxypeptidase - - - 0.0 1253.0
DYD3_k127_3499377_1 epimerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000733 476.0
DYD3_k127_3499377_2 - - - - 0.000000000000000000000000000000000000000000000000001486 193.0
DYD3_k127_3499377_3 - - - - 0.0000000000000000000208 94.0
DYD3_k127_3499377_4 acetoin utilization protein - - - 0.000000000000008189 81.0
DYD3_k127_3499377_5 - - - - 0.00000008158 60.0
DYD3_k127_3499377_6 PFAM glycosyl hydrolase BNR repeat-containing protein - - - 0.0003083 51.0
DYD3_k127_3548314_0 lysine biosynthetic process via aminoadipic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002396 587.0
DYD3_k127_3548314_1 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009701 502.0
DYD3_k127_3548314_2 PFAM amidohydrolase - - - 0.0000000000000000007101 92.0
DYD3_k127_3611240_0 Sortilin, neurotensin receptor 3, - - - 0.0 1103.0
DYD3_k127_3611240_1 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007597 479.0
DYD3_k127_3611240_2 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001907 393.0
DYD3_k127_3611240_3 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003155 385.0
DYD3_k127_3611240_4 Belongs to the hyi family K01816 - 5.3.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000152 351.0
DYD3_k127_3611240_5 amino acid K03294,K13868 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 336.0
DYD3_k127_3611240_6 ketosteroid isomerase - - - 0.000000000000000000000003336 108.0
DYD3_k127_3643716_0 Belongs to the 'phage' integrase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004774 356.0
DYD3_k127_3643716_1 AcrB/AcrD/AcrF family K03296 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001713 267.0
DYD3_k127_3643716_2 Toxic component of a toxin-antitoxin (TA) module K07171 - - 0.00000000000000000000000000000000000000006599 153.0
DYD3_k127_3643716_3 SpoVT / AbrB like domain K07172 - - 0.0000000438 57.0
DYD3_k127_3646613_0 with chaperone activity ATP-binding K03696 - - 1.224e-306 966.0
DYD3_k127_3646613_1 Surface antigen K07277 - - 3.659e-208 673.0
DYD3_k127_3646613_10 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000494 423.0
DYD3_k127_3646613_11 ATP:guanido phosphotransferase, C-terminal catalytic domain K19405 - 2.7.14.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007831 422.0
DYD3_k127_3646613_12 thiolester hydrolase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004514 396.0
DYD3_k127_3646613_13 Pyridoxal-phosphate dependent enzyme K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009851 389.0
DYD3_k127_3646613_14 MacB-like periplasmic core domain K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004067 367.0
DYD3_k127_3646613_15 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 348.0
DYD3_k127_3646613_16 PFAM regulator of chromosome condensation, RCC1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 349.0
DYD3_k127_3646613_17 NhaP-type Na H and K H - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002936 331.0
DYD3_k127_3646613_18 Diguanylate cyclase, GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004331 324.0
DYD3_k127_3646613_19 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005517 319.0
DYD3_k127_3646613_2 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00261 - 1.4.1.3 1.613e-199 629.0
DYD3_k127_3646613_20 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus K00057 - 1.1.1.94 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003723 323.0
DYD3_k127_3646613_21 PFAM Sodium calcium exchanger protein K07300 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000049 323.0
DYD3_k127_3646613_22 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005699 306.0
DYD3_k127_3646613_23 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003648 283.0
DYD3_k127_3646613_24 Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes K06898,K09121 - 4.99.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003902 282.0
DYD3_k127_3646613_25 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000002092 273.0
DYD3_k127_3646613_26 Part of the ABC transporter complex LolCDE involved in the translocation of K09810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005315 265.0
DYD3_k127_3646613_27 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000005528 269.0
DYD3_k127_3646613_28 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.00000000000000000000000000000000000000000000000000000000000000000007885 255.0
DYD3_k127_3646613_29 Bacillithiol biosynthesis BshC K22136 - - 0.0000000000000000000000000000000000000000000000000000000000000000002748 248.0
DYD3_k127_3646613_3 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 1.675e-197 632.0
DYD3_k127_3646613_30 metal cluster binding K19302 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000004322 211.0
DYD3_k127_3646613_31 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.0000000000000000000000000000000000000000000000002396 194.0
DYD3_k127_3646613_32 - - - - 0.000000000000000000000000000000000000000008701 166.0
DYD3_k127_3646613_33 - - - - 0.0000000000000000000000000000000000000000133 166.0
DYD3_k127_3646613_34 helix_turn_helix, mercury resistance - - - 0.000000000000000000000000000000000000000106 166.0
DYD3_k127_3646613_35 UvrB/uvrC motif K19411 - - 0.0000000000000000000000000000000000002579 149.0
DYD3_k127_3646613_36 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.000000000000000000000000000000000002096 156.0
DYD3_k127_3646613_37 Domain of unknown function (DUF374) K09778 - - 0.000000000000000000000000000000000003787 153.0
DYD3_k127_3646613_38 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.000000000000000000000000000002595 125.0
DYD3_k127_3646613_39 COG NOG14600 non supervised orthologous group - - - 0.00000000000000000000000000009575 116.0
DYD3_k127_3646613_4 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K16363 - 3.5.1.108,4.2.1.59 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 501.0
DYD3_k127_3646613_40 chaperone-mediated protein folding - - - 0.000000000000000000000000003521 127.0
DYD3_k127_3646613_41 Amidohydrolase family K01465,K06015 - 3.5.1.81,3.5.2.3 0.00000000000000000000271 98.0
DYD3_k127_3646613_42 Acylphosphatase K01512 - 3.6.1.7 0.000000000000000003218 87.0
DYD3_k127_3646613_43 Belongs to the UPF0434 family K09791 - - 0.000000000000000004399 89.0
DYD3_k127_3646613_44 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998 - 0.000000000000000197 86.0
DYD3_k127_3646613_45 PKD domain containing protein - - - 0.00000000000001494 79.0
DYD3_k127_3646613_46 nucleotidyltransferase activity - - - 0.0000000000002044 79.0
DYD3_k127_3646613_47 domain, Protein K07114 - - 0.000000000002956 79.0
DYD3_k127_3646613_48 HEPN domain - - - 0.000000000648 65.0
DYD3_k127_3646613_49 Tetratricopeptide repeat K12132 - 2.7.11.1 0.00000001307 60.0
DYD3_k127_3646613_5 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002063 494.0
DYD3_k127_3646613_50 PIN domain - - - 0.00000005098 60.0
DYD3_k127_3646613_51 COG0457 FOG TPR repeat - - - 0.000002453 58.0
DYD3_k127_3646613_52 Belongs to the skp family K06142 - - 0.0001224 53.0
DYD3_k127_3646613_53 Resolvase domain - - - 0.0001727 48.0
DYD3_k127_3646613_6 MviN-like protein K03980 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003387 489.0
DYD3_k127_3646613_7 Protein of unknown function (DUF512) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007144 470.0
DYD3_k127_3646613_8 Sodium/hydrogen exchanger family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 456.0
DYD3_k127_3646613_9 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008203 439.0
DYD3_k127_3722870_0 GDSL-like Lipase/Acylhydrolase family K10804 - 3.1.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001438 289.0
DYD3_k127_3722870_1 Pfam:UPF0118 - - - 0.0000000000000000000000000000000000000000003911 172.0
DYD3_k127_3722870_2 FtsX-like permease family K02004 - - 0.0000000000000000000000000000000000000001438 161.0
DYD3_k127_3722870_3 Outer membrane autotransporter - - - 0.0000000000000000002609 103.0
DYD3_k127_3722870_4 MiaB-like tRNA modifying enzyme - - - 0.00003278 52.0
DYD3_k127_3728036_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 6.603e-254 796.0
DYD3_k127_3728036_1 lysine biosynthetic process via aminoadipic acid - - - 2.289e-253 810.0
DYD3_k127_3728036_10 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000005009 172.0
DYD3_k127_3728036_11 glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000001624 134.0
DYD3_k127_3728036_12 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000000000000000000000001561 121.0
DYD3_k127_3728036_14 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.00000000000003316 75.0
DYD3_k127_3728036_2 Putative zinc-binding metallo-peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001921 462.0
DYD3_k127_3728036_3 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003457 444.0
DYD3_k127_3728036_4 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004731,GO:0006082,GO:0006139,GO:0006144,GO:0006168,GO:0006520,GO:0006555,GO:0006725,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009112,GO:0009113,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0017061,GO:0017144,GO:0018130,GO:0019438,GO:0019509,GO:0019752,GO:0034641,GO:0034654,GO:0042440,GO:0043094,GO:0043096,GO:0043101,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046083,GO:0046084,GO:0046112,GO:0046148,GO:0046394,GO:0046483,GO:0055086,GO:0071265,GO:0071267,GO:0071704,GO:0072521,GO:0072522,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004034 416.0
DYD3_k127_3728036_5 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004703 415.0
DYD3_k127_3728036_6 Prolyl oligopeptidase family K00433 - 1.11.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005569 400.0
DYD3_k127_3728036_7 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006 306.0
DYD3_k127_3728036_8 Belongs to the amidase family K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000802 311.0
DYD3_k127_3728036_9 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 GO:0000166,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003824,GO:0003999,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006810,GO:0006887,GO:0006955,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0012505,GO:0016192,GO:0016208,GO:0016740,GO:0016757,GO:0016763,GO:0017076,GO:0018130,GO:0019438,GO:0030141,GO:0030554,GO:0031410,GO:0031974,GO:0031981,GO:0031982,GO:0031983,GO:0032553,GO:0032555,GO:0032559,GO:0032940,GO:0034641,GO:0034654,GO:0034774,GO:0036094,GO:0036230,GO:0042119,GO:0043094,GO:0043101,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0046483,GO:0046903,GO:0050896,GO:0051179,GO:0051234,GO:0060205,GO:0070013,GO:0071704,GO:0072521,GO:0072522,GO:0097159,GO:0097367,GO:0097708,GO:0099503,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.4.2.7 0.000000000000000000000000000000000000000000000000000000000000003443 223.0
DYD3_k127_3734527_0 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002251 486.0
DYD3_k127_3734527_1 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002967 413.0
DYD3_k127_3734527_2 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000306 323.0
DYD3_k127_3734527_3 GlcNAc-PI de-N-acetylase K01463 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002206 296.0
DYD3_k127_381463_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001829 574.0
DYD3_k127_381463_1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001442 566.0
DYD3_k127_381463_2 Glycosyl transferase 4-like K00754 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002179 426.0
DYD3_k127_381463_3 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000005683 241.0
DYD3_k127_381463_4 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K04040,K20616 - 2.5.1.133,2.5.1.62 0.00000000000000000000000000000000000000000000000000000000000005083 227.0
DYD3_k127_381463_5 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.000000000000000000000000000000000000000000004859 178.0
DYD3_k127_381463_6 Biotin/lipoate A/B protein ligase family K03524 - 6.3.4.15 0.00000000000000000000000000000000002309 144.0
DYD3_k127_381463_7 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010033,GO:0016032,GO:0016465,GO:0019058,GO:0019068,GO:0032991,GO:0035966,GO:0042221,GO:0042802,GO:0043167,GO:0043169,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051704,GO:0061077,GO:0101031,GO:1990220 - 0.00000000000000000000000001412 113.0
DYD3_k127_381463_8 COG0791 Cell wall-associated hydrolases (invasion-associated proteins) - - - 0.000000000000000000000003987 117.0
DYD3_k127_3878058_0 DinB superfamily K18912 - 1.14.99.50 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002197 467.0
DYD3_k127_3878058_1 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006242 339.0
DYD3_k127_3878058_2 PFAM isochorismatase hydrolase K08281 - 3.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003071 293.0
DYD3_k127_3878058_3 Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine K18911 - 2.1.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000002952 275.0
DYD3_k127_3878058_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000001562 256.0
DYD3_k127_3878058_5 Catalyzes the synthesis of gamma-glutamylcysteine (gamma-GC). This compound is used as substrate for the biosynthesis of the low-molecular thiol compound ergothioneine K01919 - 6.3.2.2 0.00000000000000000000000000000000000000000001113 185.0
DYD3_k127_3878058_6 acetyltransferase K06975 - - 0.000000000000609 82.0
DYD3_k127_3903048_0 PQQ-like domain K00114,K17760 - 1.1.2.8,1.1.9.1 6.363e-217 695.0
DYD3_k127_3903048_1 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001909 619.0
DYD3_k127_3903048_10 PAS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005729 489.0
DYD3_k127_3903048_11 Serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000712 495.0
DYD3_k127_3903048_12 FtsX-like permease family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002129 485.0
DYD3_k127_3903048_13 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007349 473.0
DYD3_k127_3903048_14 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006054 421.0
DYD3_k127_3903048_15 protein kinase activity K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009718 419.0
DYD3_k127_3903048_16 PFAM ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001227 348.0
DYD3_k127_3903048_17 ABC-type glycine betaine transport system K05845,K05846 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004973 349.0
DYD3_k127_3903048_18 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004277 325.0
DYD3_k127_3903048_19 peptidase activity K18988 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002622 328.0
DYD3_k127_3903048_2 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004927 597.0
DYD3_k127_3903048_20 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007868 272.0
DYD3_k127_3903048_21 thiolester hydrolase activity K06889 - - 0.0000000000000000000000000000000000000000000000000000000000001464 239.0
DYD3_k127_3903048_22 Psort location CytoplasmicMembrane, score K05847 - - 0.0000000000000000000000000000000000000000000000000000000000003804 228.0
DYD3_k127_3903048_23 Outer membrane efflux protein K12340 - - 0.000000000000000000000000000000000000000000000000000000000002716 228.0
DYD3_k127_3903048_24 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000006631 232.0
DYD3_k127_3903048_25 protein kinase activity K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000002847 199.0
DYD3_k127_3903048_26 - - - - 0.0000000000000000000000000000000000000000000000000003611 191.0
DYD3_k127_3903048_27 - - - - 0.000000000000000000000000000000000000000000000008068 176.0
DYD3_k127_3903048_28 - - - - 0.0000000000000000000000000000000000000000003631 169.0
DYD3_k127_3903048_29 - K01387,K06399 - 3.4.21.116,3.4.24.3 0.0000000000000000000000000000000000112 156.0
DYD3_k127_3903048_3 Response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000134 576.0
DYD3_k127_3903048_30 - - - - 0.000000000000000000000000000000002157 132.0
DYD3_k127_3903048_32 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000000000006705 137.0
DYD3_k127_3903048_33 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000002931 119.0
DYD3_k127_3903048_34 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000001115 100.0
DYD3_k127_3903048_35 MacB-like periplasmic core domain - - - 0.00000000002188 73.0
DYD3_k127_3903048_36 SdpI/YhfL protein family - - - 0.0000000003665 74.0
DYD3_k127_3903048_37 protein kinase activity - - - 0.000000001542 61.0
DYD3_k127_3903048_38 glyoxalase bleomycin resistance protein dioxygenase - - - 0.000001373 57.0
DYD3_k127_3903048_39 Serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.00001178 51.0
DYD3_k127_3903048_4 efflux transmembrane transporter activity K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006681 589.0
DYD3_k127_3903048_5 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004012 572.0
DYD3_k127_3903048_6 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006853 564.0
DYD3_k127_3903048_7 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006784 550.0
DYD3_k127_3903048_8 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002191 503.0
DYD3_k127_3903048_9 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003254 499.0
DYD3_k127_3986298_0 Amidohydrolase family - - - 0.0 1195.0
DYD3_k127_3986298_1 Amidohydrolase family - - - 0.0 1180.0
DYD3_k127_3986298_2 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003704 357.0
DYD3_k127_3986298_3 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000003821 168.0
DYD3_k127_3986298_4 Putative restriction endonuclease - - - 0.000000000000000000000000003262 119.0
DYD3_k127_3986298_5 - - - - 0.000000000000002123 86.0
DYD3_k127_3986298_6 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage - - - 0.000004384 53.0
DYD3_k127_3986298_7 miRNA binding K12799,K12802 GO:0001817,GO:0001819,GO:0001932,GO:0001933,GO:0001959,GO:0001960,GO:0002376,GO:0002791,GO:0002793,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006355,GO:0006469,GO:0006950,GO:0006952,GO:0006955,GO:0007154,GO:0007165,GO:0007166,GO:0008150,GO:0008385,GO:0009889,GO:0009892,GO:0009966,GO:0009968,GO:0009987,GO:0010033,GO:0010468,GO:0010556,GO:0010563,GO:0010605,GO:0010646,GO:0010648,GO:0010803,GO:0010804,GO:0019219,GO:0019220,GO:0019221,GO:0019222,GO:0023051,GO:0023052,GO:0023057,GO:0031323,GO:0031324,GO:0031326,GO:0031399,GO:0031400,GO:0032088,GO:0032268,GO:0032269,GO:0032651,GO:0032652,GO:0032731,GO:0032732,GO:0032879,GO:0032880,GO:0032991,GO:0033209,GO:0033673,GO:0034097,GO:0034612,GO:0042221,GO:0042325,GO:0042326,GO:0043086,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043433,GO:0043549,GO:0044092,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0045087,GO:0045859,GO:0045936,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0050704,GO:0050706,GO:0050707,GO:0050708,GO:0050714,GO:0050715,GO:0050716,GO:0050718,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051090,GO:0051171,GO:0051172,GO:0051174,GO:0051222,GO:0051223,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051252,GO:0051338,GO:0051348,GO:0051716,GO:0060255,GO:0060759,GO:0060761,GO:0061695,GO:0065007,GO:0065009,GO:0070201,GO:0070887,GO:0071310,GO:0071345,GO:0071356,GO:0080090,GO:0090087,GO:1902494,GO:1902554,GO:1902911,GO:1903506,GO:1903530,GO:1903532,GO:1904951,GO:1990234,GO:2000112,GO:2001141 - 0.000537 52.0
DYD3_k127_4066299_0 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 6.116e-259 815.0
DYD3_k127_4066299_1 Belongs to the citrate synthase family K01647 - 2.3.3.1 3.142e-198 625.0
DYD3_k127_4066299_2 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.0000000000000000000000000000000000000001751 154.0
DYD3_k127_4066299_3 - - - - 0.00000000000000000000000000000001058 142.0
DYD3_k127_4066299_4 - - - - 0.000000000000000000000000002008 121.0
DYD3_k127_4066299_5 ADP-ribosylglycohydrolase K05521 - 3.2.2.24 0.000005222 57.0
DYD3_k127_4066299_6 Glycogen recognition site of AMP-activated protein kinase - - - 0.0004736 42.0
DYD3_k127_4083960_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1362.0
DYD3_k127_4083960_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 4.539e-261 818.0
DYD3_k127_4083960_10 Enoyl-CoA hydratase/isomerase K01715 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005576 286.0
DYD3_k127_4083960_11 GTP cyclohydrolase I K00950,K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006082,GO:0006139,GO:0006575,GO:0006725,GO:0006729,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008616,GO:0009058,GO:0009108,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0019752,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034404,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0040007,GO:0042455,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046116,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617,GO:1901657,GO:1901659 2.7.6.3,3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000003612 265.0
DYD3_k127_4083960_12 PspA/IM30 family K03969 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002612 257.0
DYD3_k127_4083960_13 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.000000000000000000000000000000000000000000000000000000000000000001391 235.0
DYD3_k127_4083960_14 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 - - 0.000000000000000000000000000000000000000000000000000000000000000001938 244.0
DYD3_k127_4083960_15 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000009017 229.0
DYD3_k127_4083960_16 Histidine kinase K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000003097 221.0
DYD3_k127_4083960_17 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000000000000000000000001307 192.0
DYD3_k127_4083960_18 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000003765 185.0
DYD3_k127_4083960_19 Phosphoribosyl transferase domain K07101 - - 0.0000000000000000000000000000000000000000000002161 173.0
DYD3_k127_4083960_2 Cytochrome c-type biogenesis protein CcmF C-terminal K02198 - - 2.367e-253 799.0
DYD3_k127_4083960_20 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.00000000000000000000000000000000000000001086 158.0
DYD3_k127_4083960_21 Responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17, an exported protein that targets the essential topoisomerase II DNA gyrase K03568 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0019538,GO:0043170,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564 - 0.00000000000000000000000000000000004235 151.0
DYD3_k127_4083960_22 Putative modulator of DNA gyrase K03592 - - 0.000000000000000000000000000000001047 146.0
DYD3_k127_4083960_23 - - - - 0.00000000000000000000000000000003365 137.0
DYD3_k127_4083960_24 - - - - 0.000000000000000000000000000004907 129.0
DYD3_k127_4083960_25 AMP binding - - - 0.0000000000000000000000371 108.0
DYD3_k127_4083960_26 sensor histidine kinase response - - - 0.00000000000000000000007683 112.0
DYD3_k127_4083960_27 subunit of a heme lyase K02200 - - 0.0000000000000000000003504 106.0
DYD3_k127_4083960_28 - - - - 0.000000000000000001018 97.0
DYD3_k127_4083960_29 - - - - 0.0000000000000007134 85.0
DYD3_k127_4083960_3 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 626.0
DYD3_k127_4083960_30 - - - - 0.0000000000000464 78.0
DYD3_k127_4083960_31 COG0457 FOG TPR repeat - - - 0.0000000000257 74.0
DYD3_k127_4083960_32 hydrocarbon binding protein (Contains V4R domain) K07013 - - 0.000000009172 64.0
DYD3_k127_4083960_33 Protein of unknown function (DUF721) - - - 0.00000002067 60.0
DYD3_k127_4083960_34 Bacterial transglutaminase-like N-terminal region - - - 0.000005113 59.0
DYD3_k127_4083960_4 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 - 2.7.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007395 567.0
DYD3_k127_4083960_5 Pyrimidine nucleoside phosphorylase C-terminal domain K00756 - 2.4.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 525.0
DYD3_k127_4083960_6 PFAM AMP-dependent synthetase K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004982 522.0
DYD3_k127_4083960_7 Putative ATP-binding cassette K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001726 491.0
DYD3_k127_4083960_8 Domain of unknown function (DUF1611_N) Rossmann-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006353 378.0
DYD3_k127_4083960_9 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007069 350.0
DYD3_k127_4112355_0 MacB-like periplasmic core domain - - - 4.064e-199 650.0
DYD3_k127_4112355_1 Bacterial transcriptional activator domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004678 391.0
DYD3_k127_4112355_11 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00000005275 62.0
DYD3_k127_4112355_12 TonB-dependent receptor plug - - - 0.0009216 50.0
DYD3_k127_4112355_2 Helix-turn-helix XRE-family like proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004418 340.0
DYD3_k127_4112355_3 Transposase IS116/IS110/IS902 family K07486 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004925 328.0
DYD3_k127_4112355_4 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 322.0
DYD3_k127_4112355_5 Glycine zipper - - - 0.000000000000000000000000000000000000000000000000000000000000002286 225.0
DYD3_k127_4112355_6 phosphorelay signal transduction system K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000001433 209.0
DYD3_k127_4112355_7 - - - - 0.000000000000000000000000000009913 122.0
DYD3_k127_4112355_8 - - - - 0.000000000000000000539 94.0
DYD3_k127_4112355_9 - - - - 0.000000000000003096 82.0
DYD3_k127_4134590_0 Dihydrodipicolinate synthetase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 422.0
DYD3_k127_4134590_1 epimerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000026 376.0
DYD3_k127_4134590_2 Amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005579 338.0
DYD3_k127_4134590_3 peptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004821 314.0
DYD3_k127_4134590_4 ADP-glyceromanno-heptose 6-epimerase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002182 274.0
DYD3_k127_4134590_5 Aminotransferase class-III K01845 - 5.4.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008614 277.0
DYD3_k127_4134590_6 amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000002683 212.0
DYD3_k127_4134590_7 PFAM NUDIX hydrolase - - - 0.0000000000000000000000000000000000000000000000000006925 189.0
DYD3_k127_4186099_0 Binding-protein-dependent transport system inner membrane component K02037,K02038 - - 6.504e-280 879.0
DYD3_k127_4186099_1 PBP superfamily domain K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005977 501.0
DYD3_k127_4186099_2 PFAM response regulator receiver - - - 0.0000000000000000000758 90.0
DYD3_k127_4186099_3 phosphate transport system permease protein K02038 - - 0.000000000000000001775 93.0
DYD3_k127_4279770_0 Dienelactone hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000231 489.0
DYD3_k127_4279770_1 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004511 433.0
DYD3_k127_4279770_2 L-asparaginase II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 376.0
DYD3_k127_4279770_3 pfkB family carbohydrate kinase K03272 - 2.7.1.167,2.7.7.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004089 357.0
DYD3_k127_4279770_4 DNA recombination-mediator protein A K04096 - - 0.00000000000000000000000000000000000000000000000000000000000000000002238 247.0
DYD3_k127_4279770_5 Ankyrin repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000001284 246.0
DYD3_k127_4279770_6 Carboxymuconolactone decarboxylase family K01607 - 4.1.1.44 0.000000000000000000000000000000000000000000000003078 184.0
DYD3_k127_4279770_7 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000000000000000000000000000000003788 183.0
DYD3_k127_4279770_8 - - - - 0.000000000002702 75.0
DYD3_k127_4287564_0 - - - - 0.000000000005794 68.0
DYD3_k127_4287564_1 Phage integrase, N-terminal SAM-like domain - - - 0.00004389 46.0
DYD3_k127_4287564_2 - - - - 0.0006272 49.0
DYD3_k127_4287669_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1022.0
DYD3_k127_4287669_1 Transketolase, pyrimidine binding domain K11381 - 1.2.4.4 2.82e-234 732.0
DYD3_k127_4287669_10 Archaeal transcriptional regulator TrmB - - - 0.000000000007371 75.0
DYD3_k127_4287669_11 response regulator receiver - - - 0.00001274 55.0
DYD3_k127_4287669_2 cAMP biosynthetic process K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000223 531.0
DYD3_k127_4287669_3 Dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 525.0
DYD3_k127_4287669_4 Serine/Threonine protein kinases, catalytic domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002437 394.0
DYD3_k127_4287669_5 Putative glycosyl hydrolase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002033 274.0
DYD3_k127_4287669_6 Nodulation protein S (NodS) - - - 0.000000000000000000000000000000000000000000000000000000000000000000489 237.0
DYD3_k127_4287669_7 - - - - 0.00000000000000000000000000000000000000000000002344 185.0
DYD3_k127_4287669_8 - - - - 0.0000000000000000000000000009449 132.0
DYD3_k127_4287669_9 hydrolase activity, acting on ester bonds - - - 0.0000000000000000000000006794 115.0
DYD3_k127_4298888_0 Bacterial regulatory protein, Fis family - - - 1.252e-201 643.0
DYD3_k127_4298888_1 OST-HTH/LOTUS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006035 398.0
DYD3_k127_4298888_2 Chain length determinant protein K16554 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 299.0
DYD3_k127_4298888_3 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000009942 250.0
DYD3_k127_4298888_4 Methylpurine-DNA glycosylase (MPG) K03652 - 3.2.2.21 0.00000000000000000000000000000000000000000000000004272 186.0
DYD3_k127_4298888_5 NAD-dependent epimerase dehydratase K00091 - 1.1.1.219 0.0000000000000000000000000000000000000000001897 174.0
DYD3_k127_4298888_6 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0000000000000000000000000000000000001612 154.0
DYD3_k127_4298888_7 acetyltransferase - - - 0.0000000000000000000000000000000000003004 154.0
DYD3_k127_4298888_8 inositol 2-dehydrogenase activity - - - 0.00000000000000000000000000000000001812 149.0
DYD3_k127_4298888_9 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000002974 146.0
DYD3_k127_4307855_0 Transglycosylase K05366 - 2.4.1.129,3.4.16.4 4.831e-225 717.0
DYD3_k127_4307855_1 Asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 608.0
DYD3_k127_4307855_10 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002157 325.0
DYD3_k127_4307855_11 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 312.0
DYD3_k127_4307855_12 Cytochrome c K07243 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001711 317.0
DYD3_k127_4307855_13 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001715 306.0
DYD3_k127_4307855_14 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007166 294.0
DYD3_k127_4307855_15 HNH nucleases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009774 284.0
DYD3_k127_4307855_16 Protein involved in cellulose biosynthesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001774 283.0
DYD3_k127_4307855_17 xylanase chitin deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003416 273.0
DYD3_k127_4307855_18 Amidohydrolase family K12960,K20810 - 3.5.4.28,3.5.4.31,3.5.4.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006027 281.0
DYD3_k127_4307855_19 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001422 268.0
DYD3_k127_4307855_2 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 505.0
DYD3_k127_4307855_20 4Fe-4S single cluster domain K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001566 268.0
DYD3_k127_4307855_21 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000004204 258.0
DYD3_k127_4307855_22 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000003575 255.0
DYD3_k127_4307855_23 N-terminal domain of galactosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000001888 220.0
DYD3_k127_4307855_24 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000007729 231.0
DYD3_k127_4307855_25 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000000000000000000000000002615 213.0
DYD3_k127_4307855_26 Glycosyl transferase, family 2 - - - 0.00000000000000000000000000000000000000000000000000000003056 207.0
DYD3_k127_4307855_27 PFAM glycosyl transferase family 9 K02843 - - 0.00000000000000000000000000000000000000000000000000000003944 209.0
DYD3_k127_4307855_28 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.0000000000000000000000000000000000000000000000000001483 190.0
DYD3_k127_4307855_29 PFAM Glycosyl transferase, group 1 K13668 GO:0000009,GO:0000030,GO:0003674,GO:0003824,GO:0004376,GO:0005575,GO:0005623,GO:0005886,GO:0006629,GO:0006643,GO:0006664,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009247,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0016758,GO:0033164,GO:0040007,GO:0043750,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044464,GO:0046467,GO:0070085,GO:0071704,GO:0071944,GO:0097502,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.4.1.346 0.000000000000000000000000000000000000000000000000002052 197.0
DYD3_k127_4307855_3 Sigma-54 interaction domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005903 494.0
DYD3_k127_4307855_30 Haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000001269 196.0
DYD3_k127_4307855_31 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000000000884 158.0
DYD3_k127_4307855_32 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.000000000000000000000000000000000000001023 159.0
DYD3_k127_4307855_33 Glutathione peroxidase - - - 0.000000000000000000000000000000000000001071 163.0
DYD3_k127_4307855_34 Diacylglycerol kinase catalytic domain - - - 0.000000000000000000000000000000000007588 158.0
DYD3_k127_4307855_35 UDP-4-amino-4-deoxy-L-arabinose aminotransferase - - - 0.00000000000000000000000000000000001787 154.0
DYD3_k127_4307855_36 - - - - 0.00000000000000000001717 101.0
DYD3_k127_4307855_37 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788,K10810 - 2.5.1.3,5.3.99.10 0.00000000000000000004157 98.0
DYD3_k127_4307855_38 DUF based on E. rectale Gene description (DUF3880) K06320 - - 0.00000000000000000009317 101.0
DYD3_k127_4307855_39 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000171 105.0
DYD3_k127_4307855_4 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003764 462.0
DYD3_k127_4307855_40 Preprotein translocase subunit K03210 - - 0.00000000000000001289 89.0
DYD3_k127_4307855_41 VanZ like family - - - 0.0000000000002959 82.0
DYD3_k127_4307855_42 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.0000000000005827 77.0
DYD3_k127_4307855_43 ThiS family K03154 - - 0.0000000003086 66.0
DYD3_k127_4307855_44 serine threonine protein kinase K08884,K12132 GO:0002237,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005539,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009617,GO:0009719,GO:0009847,GO:0009987,GO:0010033,GO:0010243,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0023052,GO:0032494,GO:0032502,GO:0036211,GO:0042221,GO:0042834,GO:0043170,GO:0043207,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051704,GO:0051707,GO:0051716,GO:0065007,GO:0070887,GO:0071216,GO:0071219,GO:0071224,GO:0071310,GO:0071417,GO:0071495,GO:0071704,GO:0071944,GO:0097367,GO:0140096,GO:1901564,GO:1901698,GO:1901699,GO:1901700,GO:1901701 2.7.11.1 0.0000001174 62.0
DYD3_k127_4307855_45 Surface antigen K07278 - - 0.0002427 46.0
DYD3_k127_4307855_5 ABC transporter transmembrane region K11085 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002561 463.0
DYD3_k127_4307855_6 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 430.0
DYD3_k127_4307855_7 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002116 434.0
DYD3_k127_4307855_8 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004152 391.0
DYD3_k127_4307855_9 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002294 346.0
DYD3_k127_4472970_0 Elongation factor G C-terminus K06207 - - 2.508e-280 875.0
DYD3_k127_4472970_1 Transporter associated domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 377.0
DYD3_k127_4472970_2 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.0000000000000000000000000000000000000000000000000000000000175 210.0
DYD3_k127_4472970_3 Methyltransferase domain - - - 0.0000000000000000000000000000000000002611 151.0
DYD3_k127_4472970_4 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.00000000000000000000000000000002574 128.0
DYD3_k127_4472970_5 gluconolactonase activity - - - 0.00000000000000000000000000000003374 144.0
DYD3_k127_4472970_6 SnoaL-like polyketide cyclase - - - 0.000000000000000000000000000003537 122.0
DYD3_k127_4472970_7 Domain of unknown function (DU1801) - - - 0.00000000000000000000008975 104.0
DYD3_k127_4472970_8 PQQ-like domain - - - 0.00000000000001898 78.0
DYD3_k127_4472970_9 Subtilase family - - - 0.00006302 56.0
DYD3_k127_4483522_0 Transglycosylase SLT domain K08307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005861 269.0
DYD3_k127_4483522_1 DNA polymerase III, delta subunit K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000002281 202.0
DYD3_k127_4483522_2 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.000000000000000000000000000000000000000000001634 172.0
DYD3_k127_4483522_3 Transglycosylase SLT domain - - - 0.00000000000000000000000000000005825 134.0
DYD3_k127_4483522_4 Transposase mutator type - - - 0.0000000000002516 74.0
DYD3_k127_4483522_5 UDP-4-amino-4-deoxy-L-arabinose aminotransferase - - - 0.00000000000643 74.0
DYD3_k127_4483522_6 PIN domain protein - - - 0.00000000001639 72.0
DYD3_k127_4483522_7 Zinc-binding dehydrogenase - - - 0.00000000003951 64.0
DYD3_k127_4483522_8 - - - - 0.000002141 53.0
DYD3_k127_4483522_9 SelR domain K07305 - 1.8.4.12 0.00001323 47.0
DYD3_k127_4516488_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000001189 226.0
DYD3_k127_45419_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 2.841e-267 841.0
DYD3_k127_45419_1 Domain of unknown function (DUF5118) - - - 1.519e-260 828.0
DYD3_k127_45419_10 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000545 352.0
DYD3_k127_45419_11 Amino acid kinase family K00928 - 2.7.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002303 364.0
DYD3_k127_45419_12 Peptidase dimerisation domain K01438 - 3.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 304.0
DYD3_k127_45419_13 Berberine and berberine like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001219 295.0
DYD3_k127_45419_14 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001948 295.0
DYD3_k127_45419_15 Glycosyl hydrolases family 16 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001611 282.0
DYD3_k127_45419_16 PHP domain protein K01183 - 3.2.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000003048 260.0
DYD3_k127_45419_17 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000004458 233.0
DYD3_k127_45419_18 Belongs to the short-chain dehydrogenases reductases (SDR) family K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000952 202.0
DYD3_k127_45419_2 Amidase - - - 1.242e-200 637.0
DYD3_k127_45419_20 L,D-transpeptidase catalytic domain - - - 0.0000000000000000000000000000000000000000000001485 178.0
DYD3_k127_45419_21 Putative metallopeptidase - - - 0.0000000000000000000000000000000000000000001253 170.0
DYD3_k127_45419_22 Belongs to the DapB family K00215 - 1.17.1.8 0.000000000000000000000000000000000000000001526 168.0
DYD3_k127_45419_24 Endonuclease Exonuclease phosphatase - - - 0.00000000000003669 81.0
DYD3_k127_45419_25 Protein of unknown function (DUF3568) - - - 0.0000000000000785 78.0
DYD3_k127_45419_26 Rhodanese-related sulfurtransferase - - - 0.00000000000009678 80.0
DYD3_k127_45419_3 MatE - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001306 611.0
DYD3_k127_45419_4 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004828 630.0
DYD3_k127_45419_5 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009711 536.0
DYD3_k127_45419_6 membrane organization - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000255 523.0
DYD3_k127_45419_7 Belongs to the aspartate-semialdehyde dehydrogenase family K00133 - 1.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 385.0
DYD3_k127_45419_8 YcaO cyclodehydratase, ATP-ad Mg2+-binding K09136 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002996 375.0
DYD3_k127_45419_9 TfuA-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 370.0
DYD3_k127_4544385_0 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000157 395.0
DYD3_k127_4544385_1 Adenylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002203 379.0
DYD3_k127_4544385_10 Toxic component of a toxin-antitoxin (TA) module. An RNase K07065 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016072,GO:0016075,GO:0016787,GO:0016788,GO:0019439,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0040008,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0045926,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0065007,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575 - 0.000000000002267 73.0
DYD3_k127_4544385_11 Ribosomal protein S21 K02970 - - 0.0000000003233 70.0
DYD3_k127_4544385_12 Serine aminopeptidase, S33 - - - 0.00000006541 59.0
DYD3_k127_4544385_13 Protein kinase domain K12132 - 2.7.11.1 0.000008939 58.0
DYD3_k127_4544385_14 protein kinase activity - - - 0.0001643 45.0
DYD3_k127_4544385_2 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000000000000000001033 178.0
DYD3_k127_4544385_3 Domain of unknown function (DUF4331) - - - 0.000000000000000000000000000000000000000002283 168.0
DYD3_k127_4544385_4 protein conserved in cyanobacteria - - - 0.00000000000000000000000000000000000000003078 160.0
DYD3_k127_4544385_5 Ribonuclease B OB domain K03704 - - 0.000000000000000000000000000000038 129.0
DYD3_k127_4544385_7 Anti-sigma-K factor rskA - - - 0.0000000000000000000000000004608 127.0
DYD3_k127_4544385_8 Domain of unknown function (DUF4331) - - - 0.000000000000001751 84.0
DYD3_k127_4544385_9 Tetratricopeptide repeat - - - 0.000000000000004201 89.0
DYD3_k127_4544446_0 cAMP biosynthetic process K08282,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002987 451.0
DYD3_k127_4544446_1 protein kinase activity - - - 0.00000000000000000000002968 101.0
DYD3_k127_4555711_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1159.0
DYD3_k127_4555711_1 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001482 289.0
DYD3_k127_4555711_2 Mycothiol maleylpyruvate isomerase N-terminal domain - - - 0.00000000000000000000000000000000000000000003025 172.0
DYD3_k127_4555711_3 EamA-like transporter family - - - 0.000000000000000000000000007024 121.0
DYD3_k127_4555711_4 integral membrane protein K07027 - - 0.0000000000000000000000005457 117.0
DYD3_k127_4555711_5 - - - - 0.0004705 50.0
DYD3_k127_4555711_6 Forkhead associated domain - - - 0.0007838 48.0
DYD3_k127_455910_0 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000378 327.0
DYD3_k127_455910_1 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009406 309.0
DYD3_k127_455910_2 Domain of unknown function (DUF1731) K07071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003744 281.0
DYD3_k127_4580488_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005147 355.0
DYD3_k127_4580488_1 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002776 263.0
DYD3_k127_4580488_2 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000006312 174.0
DYD3_k127_4580488_3 DinB superfamily - - - 0.000000000000006665 83.0
DYD3_k127_4580488_4 SnoaL-like domain - - - 0.000000292 59.0
DYD3_k127_4580488_5 cell adhesion involved in biofilm formation - - - 0.0003809 52.0
DYD3_k127_4599208_0 xanthine dehydrogenase activity - - - 0.0 1021.0
DYD3_k127_4599208_1 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004284 497.0
DYD3_k127_4599208_2 Phosphatidylethanolamine-binding protein K06910 - - 0.000000000000000000000000000000000000000000000000000000000000000000005908 239.0
DYD3_k127_4599208_3 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.00000000000000000000000000000000000000001218 175.0
DYD3_k127_4599208_4 PIN domain - - - 0.0000000000000000000000000000000000000003258 152.0
DYD3_k127_4599208_5 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000000001341 136.0
DYD3_k127_4599208_6 response regulator K02282 - - 0.000000000000000002459 93.0
DYD3_k127_4599208_7 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.00000000000000001638 84.0
DYD3_k127_4599208_8 Domain of unknown function (DUF1854) - - - 0.000000000009138 73.0
DYD3_k127_4599208_9 CO dehydrogenase flavoprotein C-terminal domain K13479 - 1.17.1.4 0.00000000001363 73.0
DYD3_k127_4612062_0 Fumarase C C-terminus K01744 - 4.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003946 613.0
DYD3_k127_4612062_1 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003782 484.0
DYD3_k127_4612062_10 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.00000000000000000000000000000000000000000000000000000002003 198.0
DYD3_k127_4612062_11 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.00000000000000000000000000000000000000000000000000002845 193.0
DYD3_k127_4612062_12 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.00000000000000000000000000000000000000000289 173.0
DYD3_k127_4612062_13 Ribosomal protein L17 K02879 - - 0.000000000000000000000000000000000000124 145.0
DYD3_k127_4612062_14 transcriptional regulator - - - 0.000000000000000000000306 102.0
DYD3_k127_4612062_15 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.0000000000000000006834 89.0
DYD3_k127_4612062_16 Ribosomal protein L36 K02919 - - 0.00000000000005867 73.0
DYD3_k127_4612062_17 Cupin domain - - - 0.000000000001888 73.0
DYD3_k127_4612062_2 Mo-molybdopterin cofactor metabolic process K03148,K03636,K21029,K21147 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006732,GO:0006777,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008146,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009108,GO:0009605,GO:0009607,GO:0009987,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0016782,GO:0018130,GO:0019344,GO:0019538,GO:0019637,GO:0019720,GO:0019752,GO:0020012,GO:0030312,GO:0030682,GO:0042783,GO:0043170,GO:0043207,GO:0043436,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0050896,GO:0051186,GO:0051188,GO:0051189,GO:0051701,GO:0051704,GO:0051707,GO:0051805,GO:0051807,GO:0051810,GO:0051832,GO:0051834,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0061605,GO:0070566,GO:0071704,GO:0071944,GO:0075136,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.7.73,2.7.7.80,2.8.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006723 455.0
DYD3_k127_4612062_3 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000225 452.0
DYD3_k127_4612062_4 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily K17828 - 1.3.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000168 316.0
DYD3_k127_4612062_5 FAD dependent oxidoreductase K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 311.0
DYD3_k127_4612062_6 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001464 304.0
DYD3_k127_4612062_7 COGs COG0491 Zn-dependent hydrolase including glyoxylase - - - 0.0000000000000000000000000000000000000000000000000000000000004524 218.0
DYD3_k127_4612062_8 Ami_3 K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000001466 227.0
DYD3_k127_4612062_9 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.0000000000000000000000000000000000000000000000000000000002556 204.0
DYD3_k127_4625144_0 COGs COG0318 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K00666 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 552.0
DYD3_k127_4625144_1 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002016 523.0
DYD3_k127_4625144_10 Pyridoxal-phosphate dependent enzyme - - - 0.000000000000000000000000000002831 126.0
DYD3_k127_4625144_11 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.00004517 49.0
DYD3_k127_4625144_2 Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively K01556 - 3.7.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006133 422.0
DYD3_k127_4625144_3 PAS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006118 382.0
DYD3_k127_4625144_4 Tryptophan 2,3-dioxygenase K00453 - 1.13.11.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 333.0
DYD3_k127_4625144_5 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001454 337.0
DYD3_k127_4625144_6 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005434 306.0
DYD3_k127_4625144_7 Transcriptional regulatory protein, C terminal K02483,K07665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008321 311.0
DYD3_k127_4625144_8 Putative cyclase K07130 GO:0003674,GO:0003824,GO:0004061,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019439,GO:0019441,GO:0019752,GO:0032787,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043420,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0070189,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 3.5.1.9 0.000000000000000000000000000000000000000000000352 173.0
DYD3_k127_4625144_9 - - - - 0.00000000000000000000000000000000006279 155.0
DYD3_k127_466452_0 Sortilin, neurotensin receptor 3, - - - 0.0 1066.0
DYD3_k127_466452_1 peptidase S9 prolyl oligopeptidase active site domain protein - GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008239,GO:0009056,GO:0009987,GO:0016787,GO:0019538,GO:0033218,GO:0034641,GO:0042277,GO:0042597,GO:0042802,GO:0042803,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044464,GO:0046983,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 1.644e-231 735.0
DYD3_k127_466452_10 SdiA-regulated - - - 0.00000000000000000000000000002126 132.0
DYD3_k127_466452_11 SURF1 family K14998 - - 0.00000000000000000007057 99.0
DYD3_k127_466452_12 Multicopper oxidase K22348 - 1.16.3.3 0.00000000000001939 85.0
DYD3_k127_466452_13 Protein of unknown function (DUF2442) - - - 0.00000000000006359 76.0
DYD3_k127_466452_14 Domain of unknown function (DUF4160) - - - 0.000000008228 59.0
DYD3_k127_466452_15 Peptidase family U32 K08303 - - 0.0000001733 57.0
DYD3_k127_466452_16 Domain of unknown function (DUF4160) - - - 0.000009213 52.0
DYD3_k127_466452_2 membrane organization - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000209 565.0
DYD3_k127_466452_3 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008689 438.0
DYD3_k127_466452_4 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001544 417.0
DYD3_k127_466452_5 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001863 293.0
DYD3_k127_466452_6 Calcineurin-like phosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000000000001519 228.0
DYD3_k127_466452_7 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K04750 - - 0.0000000000000000000000000000000000000000000000000001591 192.0
DYD3_k127_466452_8 Domain of unknown function (DUF4956) - - - 0.000000000000000000000000000000000000000000000004334 186.0
DYD3_k127_466452_9 peptidyl-tyrosine sulfation K13992 - - 0.0000000000000000000000000000000000000000008895 171.0
DYD3_k127_4701458_0 PFAM Tripartite tricarboxylate transporter TctA family K07793 - - 8.401e-204 645.0
DYD3_k127_4701458_1 transporter K12942 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002594 572.0
DYD3_k127_4701458_10 Tripartite tricarboxylate transporter TctB family K07794 - - 0.0000000003389 69.0
DYD3_k127_4701458_11 Domain of unknown function (DUF4382) - - - 0.0002404 51.0
DYD3_k127_4701458_2 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007843 510.0
DYD3_k127_4701458_3 Insulinase (Peptidase family M16) K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006282 498.0
DYD3_k127_4701458_4 PFAM Tripartite tricarboxylate transporter family receptor K07795 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001795 387.0
DYD3_k127_4701458_5 Xylose isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002841 377.0
DYD3_k127_4701458_6 Insulinase (Peptidase family M16) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 359.0
DYD3_k127_4701458_7 cellulose binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002205 313.0
DYD3_k127_4701458_8 Belongs to the serpin family K13963 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 307.0
DYD3_k127_4701458_9 Domain of Unknown Function (DUF1080) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004096 267.0
DYD3_k127_4720766_0 5TM C-terminal transporter carbon starvation CstA K06200 - - 1.145e-284 892.0
DYD3_k127_4720766_1 Acyl-CoA dehydrogenase, C-terminal domain K00252 - 1.3.8.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004678 603.0
DYD3_k127_4720766_2 Isocitrate/isopropylmalate dehydrogenase K00030 - 1.1.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001921 435.0
DYD3_k127_4720766_3 PFAM Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000006543 244.0
DYD3_k127_4720766_4 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000001644 213.0
DYD3_k127_4720766_5 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000626 194.0
DYD3_k127_4720766_6 - - - - 0.00000000000000000000000000000000000000000003066 178.0
DYD3_k127_4720766_7 small protein - - - 0.000000000007406 69.0
DYD3_k127_4720766_8 Bacterial protein of unknown function (DUF885) - - - 0.0000000001068 69.0
DYD3_k127_4720766_9 electron transfer activity K03521 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016491,GO:0022900,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0055114 - 0.00000004378 56.0
DYD3_k127_4725505_0 FecCD transport family K02013,K02015 - 3.6.3.34 0.00000000000000000000000000000000000000000000000000000000000000000002247 244.0
DYD3_k127_4725505_1 ABC transporter K02013 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000000000000000385 229.0
DYD3_k127_4725505_2 PFAM periplasmic binding protein K02016 - - 0.0001025 49.0
DYD3_k127_4748921_0 Peptidase family M1 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004186 600.0
DYD3_k127_4748921_1 Peptidase dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009371 563.0
DYD3_k127_4748921_10 TM2 domain - - - 0.000000000000000000293 92.0
DYD3_k127_4748921_11 - - - - 0.000000000000000232 90.0
DYD3_k127_4748921_12 Putative porin - - - 0.0000000000001839 82.0
DYD3_k127_4748921_2 glutamate decarboxylase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 480.0
DYD3_k127_4748921_3 PFAM peptidase M18 aminopeptidase I - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 404.0
DYD3_k127_4748921_4 HEAT repeats - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001803 281.0
DYD3_k127_4748921_5 HEAT repeats - - - 0.000000000000000000000000000000000000000000000000000000000000000000004024 243.0
DYD3_k127_4748921_7 Sigma-70 region 2 K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000009512 231.0
DYD3_k127_4748921_8 dehydratase - - - 0.0000000000000000000000000000000000000000000000000000000000002029 215.0
DYD3_k127_4748921_9 Gluconate 2-dehydrogenase subunit 3 - - - 0.0000000000000000000000000000000000000000000000000000009547 198.0
DYD3_k127_475341_0 Sodium:neurotransmitter symporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007732 542.0
DYD3_k127_4753628_0 Fic/DOC family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001877 454.0
DYD3_k127_4753628_1 protein kinase activity K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001826 403.0
DYD3_k127_4753628_10 Protein of unknown function (DUF2442) - - - 0.00000002203 57.0
DYD3_k127_4753628_2 PHP domain protein - - - 0.0000000000000000000000000000000000000000000000008982 181.0
DYD3_k127_4753628_3 Catalyzes a proton abstraction reaction that results in 2,5-elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6- hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC) K08680 - 4.2.99.20 0.0000000000000000000000000000000000001219 155.0
DYD3_k127_4753628_4 negative regulation of transcription, DNA-templated - - - 0.0000000000000000000000000000000001643 135.0
DYD3_k127_4753628_5 Putative restriction endonuclease - - - 0.0000000000000000001277 97.0
DYD3_k127_4753628_6 lysine biosynthetic process via aminoadipic acid - - - 0.00000000000000000795 89.0
DYD3_k127_4753628_7 efflux transmembrane transporter activity - - - 0.0000000000000001653 81.0
DYD3_k127_4753628_8 belongs to the sigma-70 factor family, ECF subfamily K03088 - - 0.0000000008367 70.0
DYD3_k127_4753628_9 PIN domain - - - 0.000000002975 66.0
DYD3_k127_4859040_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 8.931e-251 786.0
DYD3_k127_4859040_1 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 4.882e-203 647.0
DYD3_k127_4859040_10 Cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.00000000000000000000000000000000000000000006128 170.0
DYD3_k127_4859040_11 Transcription elongation factor, N-terminal K03624 - - 0.0000000000000000001739 99.0
DYD3_k127_4859040_12 - - - - 0.0000000000000000008224 93.0
DYD3_k127_4859040_13 Prokaryotic Cytochrome C oxidase subunit IV K02277 - 1.9.3.1 0.00000000003209 68.0
DYD3_k127_4859040_14 Cytochrome c K00405 - - 0.000000009236 65.0
DYD3_k127_4859040_2 aerobic electron transport chain K00425,K08738 - 1.10.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001683 458.0
DYD3_k127_4859040_3 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003519 310.0
DYD3_k127_4859040_4 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003749 302.0
DYD3_k127_4859040_5 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000002135 243.0
DYD3_k127_4859040_6 Cytochrome c oxidase subunit III K02276,K02299 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000002702 218.0
DYD3_k127_4859040_7 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000008406 214.0
DYD3_k127_4859040_8 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.00000000000000000000000000000000000000000000000000000000006505 226.0
DYD3_k127_4859040_9 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000000000000000000000000000000000000005272 201.0
DYD3_k127_4876356_0 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain - - - 3.286e-242 767.0
DYD3_k127_4876356_1 TonB dependent receptor - - - 2.018e-228 741.0
DYD3_k127_4876356_10 Nitroreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006213 310.0
DYD3_k127_4876356_11 phosphorelay signal transduction system K02483 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000177 259.0
DYD3_k127_4876356_12 - - - - 0.000000000000000000000000000000000000000000000000000000000006314 217.0
DYD3_k127_4876356_13 Histidine kinase K02482 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000113 220.0
DYD3_k127_4876356_14 Cytochrome c oxidase, subunit II K02275 - 1.9.3.1 0.0000000000000000000000000000000004707 139.0
DYD3_k127_4876356_15 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000008291 102.0
DYD3_k127_4876356_16 - - - - 0.0000000000000001538 80.0
DYD3_k127_4876356_17 - - - - 0.000000000000003925 78.0
DYD3_k127_4876356_18 Protein of unknown function (DUF2892) - - - 0.000000002229 61.0
DYD3_k127_4876356_19 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K15975 - - 0.00001663 51.0
DYD3_k127_4876356_2 Carbohydrate family 9 binding domain-like - - - 2.14e-204 655.0
DYD3_k127_4876356_20 AMP binding - - - 0.00004123 55.0
DYD3_k127_4876356_3 E1-E2 ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002028 522.0
DYD3_k127_4876356_4 transferase activity, transferring glycosyl groups K00713,K06338 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003667 490.0
DYD3_k127_4876356_5 COG0843 Heme copper-type cytochrome quinol oxidases, subunit 1 K02274 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002056 489.0
DYD3_k127_4876356_6 AsmA-like C-terminal region K07289 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003654 485.0
DYD3_k127_4876356_7 Putative diguanylate phosphodiesterase K21023 - 2.7.7.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002739 439.0
DYD3_k127_4876356_8 PhoQ Sensor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004756 324.0
DYD3_k127_4876356_9 LysM domain K13735 GO:0005575,GO:0005623,GO:0007155,GO:0008150,GO:0009279,GO:0009405,GO:0009987,GO:0016020,GO:0019867,GO:0022610,GO:0030260,GO:0030312,GO:0030313,GO:0031589,GO:0031975,GO:0042710,GO:0043708,GO:0044403,GO:0044409,GO:0044419,GO:0044462,GO:0044464,GO:0044764,GO:0051701,GO:0051704,GO:0051806,GO:0051828,GO:0071944,GO:0090605 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000808 314.0
DYD3_k127_4885097_0 CarboxypepD_reg-like domain - - - 1.836e-253 820.0
DYD3_k127_4885097_1 ASPIC UnbV domain protein - - - 1.905e-240 760.0
DYD3_k127_4885097_2 POT family K03305 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004975 484.0
DYD3_k127_4885097_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007189 396.0
DYD3_k127_4885097_4 Domain of unknown function (DUF4198) - - - 0.0000000000000000000000000000000000000000003559 169.0
DYD3_k127_4885097_5 transport - - - 0.000000000000000000000000000000005182 139.0
DYD3_k127_4885097_6 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.0000000000000001978 81.0
DYD3_k127_4885097_7 - - - - 0.0000001339 60.0
DYD3_k127_4888828_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 1.429e-204 658.0
DYD3_k127_4888828_1 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001513 392.0
DYD3_k127_4888828_2 Thiolase, C-terminal domain K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000001796 263.0
DYD3_k127_4920570_0 FtsX-like permease family K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005214 539.0
DYD3_k127_4920570_1 Enoyl-(Acyl carrier protein) reductase K00208 - 1.3.1.10,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 426.0
DYD3_k127_4920570_10 HmuY protein - - - 0.000003416 57.0
DYD3_k127_4920570_2 aerobic electron transport chain K00425,K08738 - 1.10.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002147 358.0
DYD3_k127_4920570_3 Proto-chlorophyllide reductase 57 kD subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 359.0
DYD3_k127_4920570_4 rubredoxin K22405 - 1.6.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006685 304.0
DYD3_k127_4920570_5 protein tyrosine kinase activity K03593 - - 0.00000000000000000000000000000000000000000000000002549 198.0
DYD3_k127_4920570_6 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.000000000000000000000000000000000000000000000002541 190.0
DYD3_k127_4920570_7 Protein of unknown function (DUF423) - - - 0.00000000000000000000000000000000000001318 147.0
DYD3_k127_4920570_9 4Fe-4S single cluster domain of Ferredoxin I - - - 0.000000000006596 71.0
DYD3_k127_499526_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001787 491.0
DYD3_k127_499526_1 Phosphoglucomutase/phosphomannomutase, C-terminal domain K15778 - 5.4.2.2,5.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002883 482.0
DYD3_k127_499526_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007731 434.0
DYD3_k127_499526_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 347.0
DYD3_k127_499526_4 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.0000000000000887 73.0
DYD3_k127_5038027_0 Domain of unknown function (DUF5117) - - - 1.621e-289 913.0
DYD3_k127_5038027_1 membrane protein (DUF2207) - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003642 586.0
DYD3_k127_5038027_10 PFAM LemA family K03744 - - 0.0000000000000000000000000000000000000000000000001205 183.0
DYD3_k127_5038027_11 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998 - 0.0000000000000000000000000000000000000000000000001723 196.0
DYD3_k127_5038027_12 - - - - 0.000000000000000000000000000000000000000000000001084 184.0
DYD3_k127_5038027_13 - - - - 0.000000000000000000000000000000000003849 148.0
DYD3_k127_5038027_14 FAD dependent oxidoreductase - - - 0.00000000000000000000000000000002673 130.0
DYD3_k127_5038027_15 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000000000000001411 131.0
DYD3_k127_5038027_16 - - - - 0.00000000000000000000000000000394 133.0
DYD3_k127_5038027_17 - - - - 0.00000000000000000000000000009643 120.0
DYD3_k127_5038027_18 DinB family - - - 0.00000000000000000000000373 108.0
DYD3_k127_5038027_19 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006810,GO:0008104,GO:0008150,GO:0009719,GO:0009987,GO:0010033,GO:0010243,GO:0015031,GO:0015833,GO:0015893,GO:0017038,GO:0019904,GO:0030288,GO:0030313,GO:0031975,GO:0032153,GO:0032991,GO:0033036,GO:0042221,GO:0042493,GO:0042597,GO:0042886,GO:0042891,GO:0043213,GO:0044464,GO:0044877,GO:0045184,GO:0046677,GO:0046678,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0070887,GO:0071236,GO:0071237,GO:0071310,GO:0071417,GO:0071495,GO:0071702,GO:0071705,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701 - 0.000000000000000000002404 98.0
DYD3_k127_5038027_2 Ferric reductase like transmembrane component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 357.0
DYD3_k127_5038027_21 - - - - 0.0000004238 58.0
DYD3_k127_5038027_22 - - - - 0.000002774 52.0
DYD3_k127_5038027_23 Prolyl oligopeptidase family - - - 0.000003122 60.0
DYD3_k127_5038027_3 homocysteine K00297,K00547 GO:0003674,GO:0003824,GO:0005488,GO:0006575,GO:0006790,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008270,GO:0008757,GO:0008898,GO:0009987,GO:0016740,GO:0016741,GO:0032259,GO:0033477,GO:0033554,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0071704,GO:1901564 1.5.1.20,2.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003443 339.0
DYD3_k127_5038027_4 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006348 337.0
DYD3_k127_5038027_5 domain protein K13735 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001697 282.0
DYD3_k127_5038027_6 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000006266 238.0
DYD3_k127_5038027_7 Acyl-transferase K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000002348 209.0
DYD3_k127_5038027_8 Sigma-70, region 4 K03088 GO:0000988,GO:0000990,GO:0003674,GO:0005575,GO:0005618,GO:0005623,GO:0006355,GO:0006950,GO:0006979,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0016987,GO:0019219,GO:0019222,GO:0030312,GO:0031323,GO:0031326,GO:0033554,GO:0034605,GO:0043254,GO:0044087,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051252,GO:0051409,GO:0051716,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2000142,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000009328 203.0
DYD3_k127_5038027_9 Paraquat-inducible protein A - - - 0.00000000000000000000000000000000000000000000000005813 184.0
DYD3_k127_5074380_0 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K16055 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0005984,GO:0005991,GO:0005992,GO:0006793,GO:0006796,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0033554,GO:0034637,GO:0042578,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044424,GO:0044464,GO:0046351,GO:0050896,GO:0051716,GO:0070413,GO:0071704,GO:1901576 2.4.1.15,3.1.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 532.0
DYD3_k127_5074380_1 Glycoside hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 492.0
DYD3_k127_5074380_2 Pyridoxal phosphate biosynthetic protein PdxA K00097 - 1.1.1.262 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000476 301.0
DYD3_k127_5074380_3 SurA N-terminal domain K03771 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000001267 251.0
DYD3_k127_5074380_4 23S rRNA-intervening sequence protein - - - 0.0000000000000000000000283 104.0
DYD3_k127_5074380_5 Peptidylprolyl isomerase K03770 - 5.2.1.8 0.00000000001723 77.0
DYD3_k127_5074380_6 SurA N-terminal domain K03771 - 5.2.1.8 0.00005057 48.0
DYD3_k127_5081194_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 8.356e-282 879.0
DYD3_k127_5081194_1 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 - 6.1.1.15 9.234e-216 679.0
DYD3_k127_5081194_10 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.0000000000000000000000000000000000000000000000000000000000001601 227.0
DYD3_k127_5081194_11 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.00000000000000000000000000000000000000000000001023 184.0
DYD3_k127_5081194_12 rod shape-determining protein MreC K03570 - - 0.000000000000000000000000000000000005731 147.0
DYD3_k127_5081194_13 rod shape-determining protein MreD K03571 - - 0.000000000000000005864 95.0
DYD3_k127_5081194_2 Hsp70 protein K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001868 587.0
DYD3_k127_5081194_3 Penicillin-binding Protein dimerisation domain K05515 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003884 559.0
DYD3_k127_5081194_4 Alanine dehydrogenase/PNT, N-terminal domain K00259 - 1.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002275 524.0
DYD3_k127_5081194_5 Histidyl-tRNA synthetase K01892 - 6.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001616 428.0
DYD3_k127_5081194_6 Insulinase (Peptidase family M16) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002003 415.0
DYD3_k127_5081194_7 Cell cycle protein K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 412.0
DYD3_k127_5081194_8 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 374.0
DYD3_k127_5081194_9 Mur ligase middle domain K11754 - 6.3.2.12,6.3.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005109 312.0
DYD3_k127_5171009_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 0.0 1070.0
DYD3_k127_5171009_1 Prolyl oligopeptidase family - - - 2.922e-290 914.0
DYD3_k127_5171009_10 Inositol monophosphatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001316 320.0
DYD3_k127_5171009_11 CO dehydrogenase flavoprotein domain protein K03519 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000003167 267.0
DYD3_k127_5171009_12 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000001967 226.0
DYD3_k127_5171009_13 response regulator - - - 0.00000000000000000000000000000000000000000000000000001598 198.0
DYD3_k127_5171009_14 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000001343 210.0
DYD3_k127_5171009_15 PD-(D/E)XK nuclease superfamily - - - 0.00000000000000000000000000000000000000000113 161.0
DYD3_k127_5171009_16 Histidine kinase - - - 0.0000000000000000000000000000000000000595 166.0
DYD3_k127_5171009_17 DinB family - - - 0.0000000000000000000000000000002362 133.0
DYD3_k127_5171009_18 MASE1 - - - 0.0000000000000000000000000001854 134.0
DYD3_k127_5171009_19 Carbon monoxide dehydrogenase subunit G (CoxG) K09386 - - 0.0000000000000000733 93.0
DYD3_k127_5171009_2 Pyruvate flavodoxin ferredoxin K00174 - 1.2.7.11,1.2.7.3 3.887e-251 790.0
DYD3_k127_5171009_20 Oligoendopeptidase f - - - 0.000003443 60.0
DYD3_k127_5171009_3 AMP-binding enzyme C-terminal domain K00666,K01897,K18660 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003483 604.0
DYD3_k127_5171009_4 metallocarboxypeptidase activity K14054 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007095 561.0
DYD3_k127_5171009_5 Permease for cytosine/purines, uracil, thiamine, allantoin K03457 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001865 496.0
DYD3_k127_5171009_6 PFAM thiamine pyrophosphate protein domain protein TPP-binding K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 465.0
DYD3_k127_5171009_7 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006281 417.0
DYD3_k127_5171009_8 Amidase K01426 - 3.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003887 385.0
DYD3_k127_5171009_9 protein kinase activity K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005758 368.0
DYD3_k127_5181524_0 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006491 582.0
DYD3_k127_5181524_1 PFAM LOR SDH bifunctional enzyme conserved region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 473.0
DYD3_k127_5181524_2 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007227 337.0
DYD3_k127_5181524_3 TonB-dependent Receptor Plug K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 346.0
DYD3_k127_5181524_4 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate K07106 - 4.2.1.126 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002437 325.0
DYD3_k127_5181524_5 Cytochrome C biogenesis protein transmembrane region K06196 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001195 272.0
DYD3_k127_5181524_6 Glycosyl hydrolase family 3 N terminal domain K05349 - 3.2.1.21 0.000000000000000000000000000000000000000000000000000000000000000001975 248.0
DYD3_k127_5181524_7 Ferric uptake regulator family K03711 - - 0.000000000000000000000000000000000001234 145.0
DYD3_k127_5181524_8 Periplasmic or secreted lipoprotein - - - 0.00000000003351 76.0
DYD3_k127_5212237_0 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000000000000000000000000000000000000000000000000000000006567 242.0
DYD3_k127_5212237_1 CAAX protease self-immunity K07052 - - 0.00000000000000000000000000000000000000000000000000001019 199.0
DYD3_k127_5212237_2 PFAM DSBA oxidoreductase - - - 0.0000000000000000000000000000000000000003926 156.0
DYD3_k127_5212237_3 Calcineurin-like phosphoesterase K01077 - 3.1.3.1 0.0000000000000000000000000003091 117.0
DYD3_k127_5212237_4 TPM domain K06872 - - 0.00000000000000001227 93.0
DYD3_k127_5212237_5 Calcineurin-like phosphoesterase - - - 0.000006732 54.0
DYD3_k127_5222845_0 Zinc carboxypeptidase - - - 3.822e-271 846.0
DYD3_k127_5222845_1 MacB-like periplasmic core domain - - - 8.639e-232 749.0
DYD3_k127_5222845_2 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000000000000000000002378 164.0
DYD3_k127_5237703_0 cellulase activity - - - 2.437e-229 734.0
DYD3_k127_5237703_1 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001703 516.0
DYD3_k127_5237703_2 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000262 354.0
DYD3_k127_5237703_3 Amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 341.0
DYD3_k127_5237703_4 Conserved TM helix - - - 0.000000000000000000000000000000000000000000000000421 184.0
DYD3_k127_5237703_5 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K01563,K11991 - 3.5.4.33,3.8.1.5 0.000000000000000000000000000000000000000000000005886 176.0
DYD3_k127_5237703_6 PFAM TadE family protein - - - 0.000000000002364 79.0
DYD3_k127_5237703_7 TadE-like protein - - - 0.0000000007716 68.0
DYD3_k127_526929_0 ASPIC UnbV domain protein - - - 3.694e-202 651.0
DYD3_k127_526929_1 cell adhesion involved in biofilm formation - - - 0.000000000000000000000000000000000004447 140.0
DYD3_k127_5300811_0 Serine dehydrogenase proteinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 326.0
DYD3_k127_5300811_1 InterPro IPR007367 - - - 0.00000000000000000000000001139 113.0
DYD3_k127_5300811_2 PIN domain K07064 - - 0.00000000000001281 81.0
DYD3_k127_5300811_3 antitoxin component of a - GO:0008150,GO:0040008,GO:0045927,GO:0048518,GO:0050789,GO:0065007 - 0.0000002164 56.0
DYD3_k127_5300811_4 Domain of unknown function(DUF2779) - - - 0.0004035 45.0
DYD3_k127_5300811_5 Adenylyltransferase that mediates the addition of adenosine 5'-monophosphate (AMP) to specific residues of target proteins - - - 0.0005921 45.0
DYD3_k127_5309045_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 1.211e-264 830.0
DYD3_k127_5309045_1 Tetratricopeptide repeat K12132 - 2.7.11.1 5.279e-242 779.0
DYD3_k127_5309045_10 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007723 346.0
DYD3_k127_5309045_11 SIS domain K06041 - 5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015 348.0
DYD3_k127_5309045_12 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009894 323.0
DYD3_k127_5309045_13 KR domain K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004279 289.0
DYD3_k127_5309045_14 DAHP synthetase I family K01627 - 2.5.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001054 308.0
DYD3_k127_5309045_15 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001185 286.0
DYD3_k127_5309045_16 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.0000000000000000000000000000000000000000000000000000000000000009761 227.0
DYD3_k127_5309045_17 DNA-templated transcription, initiation K02405 - - 0.00000000000000000000000000000000000000000000000000006323 196.0
DYD3_k127_5309045_18 Glycosyl transferase 4-like domain - - - 0.00000000000000000000000000000000000000000000000000626 196.0
DYD3_k127_5309045_19 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 - 4.6.1.12 0.0000000000000000000000000000000000000000000000002303 180.0
DYD3_k127_5309045_2 Bacterial membrane protein, YfhO - - - 7.021e-200 648.0
DYD3_k127_5309045_20 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.00000000000000000000000000000000000000000000001664 182.0
DYD3_k127_5309045_21 DinB family - - - 0.0000000000000000000000000000000000000000000009009 170.0
DYD3_k127_5309045_22 haloacid dehalogenase-like hydrolase K03270 - 3.1.3.45 0.0000000000000000000000000000000000000000002247 164.0
DYD3_k127_5309045_23 metallopeptidase activity K01186,K05994 - 3.2.1.18,3.4.11.10 0.000000000000000000000000000000000001354 156.0
DYD3_k127_5309045_24 - - - - 0.00000000000000000000000000000002118 142.0
DYD3_k127_5309045_25 Lipopolysaccharide-assembly, LptC-related - - - 0.000000000000000000000000003796 124.0
DYD3_k127_5309045_26 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.00000000000000000000000006513 121.0
DYD3_k127_5309045_27 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.00000000000000000000006998 111.0
DYD3_k127_5309045_28 MacB-like periplasmic core domain - - - 0.00000000000000000001021 104.0
DYD3_k127_5309045_29 SNARE associated Golgi protein - - - 0.00000000000000002453 95.0
DYD3_k127_5309045_3 Sigma-54 factor, Activator interacting domain (AID) K03092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003337 602.0
DYD3_k127_5309045_30 Bacterial Ig-like domain 2 - - - 0.0000000003077 72.0
DYD3_k127_5309045_31 domain protein K20276 - - 0.000001304 63.0
DYD3_k127_5309045_4 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11784 - 1.21.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002624 533.0
DYD3_k127_5309045_5 Parallel beta-helix repeats - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005151 559.0
DYD3_k127_5309045_6 Elongator protein 3, MiaB family, Radical SAM K18285 - 2.5.1.120 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007063 515.0
DYD3_k127_5309045_7 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005663 476.0
DYD3_k127_5309045_8 ABC transporter K06861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002949 381.0
DYD3_k127_5309045_9 Phage integrase, N-terminal SAM-like domain K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003561 361.0
DYD3_k127_5320454_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 1.326e-211 683.0
DYD3_k127_5320454_1 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K19802 - 5.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000525 377.0
DYD3_k127_5320454_2 Histone deacetylase domain - - - 0.000000000000000000000000000000000000000000000000000000000000001461 223.0
DYD3_k127_532259_0 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004195 550.0
DYD3_k127_532259_1 Diguanylate cyclase - - - 0.0000000000000000004064 101.0
DYD3_k127_5338996_0 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005161 329.0
DYD3_k127_5338996_1 - - - - 0.00000000000000009053 87.0
DYD3_k127_5338996_2 - - - - 0.000000000005254 76.0
DYD3_k127_5374981_0 3-oxoacyl-[acyl-carrier-protein] synthase activity K09458,K18473 - 2.3.1.179,2.3.1.180 1.365e-208 658.0
DYD3_k127_5374981_1 Domain of unknown function (DUF3471) K06889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003913 554.0
DYD3_k127_5374981_10 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003118 325.0
DYD3_k127_5374981_11 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000651 306.0
DYD3_k127_5374981_12 Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006405 308.0
DYD3_k127_5374981_13 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 304.0
DYD3_k127_5374981_14 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001295 284.0
DYD3_k127_5374981_15 response to abiotic stimulus K06867 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002967 281.0
DYD3_k127_5374981_16 PFAM GCN5-related N-acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000484 257.0
DYD3_k127_5374981_17 Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006897 261.0
DYD3_k127_5374981_18 Cell cycle protein K03588 - - 0.0000000000000000000000000000000000000000000000000000000000000000119 250.0
DYD3_k127_5374981_19 SnoaL-like polyketide cyclase - - - 0.00000000000000000000000000003202 124.0
DYD3_k127_5374981_2 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002703 542.0
DYD3_k127_5374981_20 Cell division protein FtsQ K03589 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0040007,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0071944 - 0.0000000001169 73.0
DYD3_k127_5374981_21 von Willebrand factor (vWF) type A domain - - - 0.0001808 54.0
DYD3_k127_5374981_3 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 GO:0003674,GO:0003678,GO:0003724,GO:0003824,GO:0004003,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006725,GO:0006807,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008186,GO:0009314,GO:0009379,GO:0009628,GO:0009987,GO:0010501,GO:0016020,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051276,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140097,GO:0140098,GO:1901360,GO:1902494 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004958 554.0
DYD3_k127_5374981_4 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006815 475.0
DYD3_k127_5374981_5 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001809 424.0
DYD3_k127_5374981_6 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009659 413.0
DYD3_k127_5374981_7 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 410.0
DYD3_k127_5374981_8 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005148 390.0
DYD3_k127_5374981_9 Penicillin binding protein transpeptidase domain K03587 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002907 387.0
DYD3_k127_5394199_0 pyridoxal-dependent decarboxylase K01580 - 4.1.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001957 525.0
DYD3_k127_5394199_1 Bacterial protein of unknown function (DUF839) K07093 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000227 437.0
DYD3_k127_5394199_2 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567 - 2.1.1.63 0.000000000000000000000000000000000000000000000000000000000000002122 224.0
DYD3_k127_5394199_3 TonB-dependent Receptor Plug Domain K02014 - - 0.0000002931 52.0
DYD3_k127_5399631_0 NapC/NirT cytochrome c family, N-terminal region - - - 0.000000000000000000000000000000000002789 157.0
DYD3_k127_5399631_1 Beta-ketoacyl synthase, C-terminal domain - - - 0.000000000000000000000000002702 112.0
DYD3_k127_5399631_2 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000132 116.0
DYD3_k127_5399631_3 ribosomal protein - - - 0.00000000000000002081 90.0
DYD3_k127_5407745_0 of components of various dehydrogenase complexes K00164,K01616 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006103,GO:0008150,GO:0008152,GO:0008683,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016740,GO:0016744,GO:0016829,GO:0016830,GO:0016831,GO:0016999,GO:0017144,GO:0019752,GO:0022900,GO:0030312,GO:0032991,GO:0040007,GO:0043167,GO:0043169,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045254,GO:0045333,GO:0046872,GO:0050439,GO:0051186,GO:0055114,GO:0071704,GO:0071944,GO:0072350,GO:1902494,GO:1990204,GO:1990234 1.2.4.2,4.1.1.71 4.654e-321 1024.0
DYD3_k127_5407745_1 Transketolase, thiamine diphosphate binding domain K00615 - 2.2.1.1 5.688e-252 796.0
DYD3_k127_5407745_10 Transketolase, pyrimidine binding domain K11381 - 1.2.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001462 306.0
DYD3_k127_5407745_11 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000001094 270.0
DYD3_k127_5407745_12 TIGRFAM intracellular protease, PfpI family K05520 - 3.5.1.124 0.00000000000000000000000000000000000000000000000000000000000000003335 228.0
DYD3_k127_5407745_13 - - - - 0.0000000000000000000000000000000000000000000000000004853 201.0
DYD3_k127_5407745_14 Mazg nucleotide pyrophosphohydrolase K00800 - 2.5.1.19 0.000000000000000000000000000000000000000000001065 166.0
DYD3_k127_5407745_15 endonuclease activity - - - 0.000000000000000000000000000000001619 133.0
DYD3_k127_5407745_16 protein-(glutamine-N5) methyltransferase activity - - - 0.000000000000000000006127 105.0
DYD3_k127_5407745_17 Gram-negative bacterial TonB protein C-terminal - - - 0.00000000000000000001472 108.0
DYD3_k127_5407745_18 Belongs to the UPF0337 (CsbD) family - - - 0.00000000000000001178 86.0
DYD3_k127_5407745_19 - - - - 0.00000000000005165 74.0
DYD3_k127_5407745_2 Enoyl-CoA hydratase/isomerase K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 4.373e-214 688.0
DYD3_k127_5407745_20 - - - - 0.0000000000005499 76.0
DYD3_k127_5407745_21 - - - - 0.000000000001483 71.0
DYD3_k127_5407745_22 ig-like, plexins, transcription factors - - - 0.00005537 56.0
DYD3_k127_5407745_23 kelch repeat-containing protein - - - 0.00009648 55.0
DYD3_k127_5407745_3 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001291 572.0
DYD3_k127_5407745_4 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004834 569.0
DYD3_k127_5407745_5 Thiolase, C-terminal domain K00632 - 2.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 519.0
DYD3_k127_5407745_6 C-terminal domain of alpha-glycerophosphate oxidase K00111 - 1.1.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 443.0
DYD3_k127_5407745_7 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K13810 - 2.2.1.2,5.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005609 391.0
DYD3_k127_5407745_8 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K03309 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006831 394.0
DYD3_k127_5407745_9 Proline dehydrogenase K00318 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001426 342.0
DYD3_k127_5420352_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696,K06001 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005576 545.0
DYD3_k127_5420352_1 Peptidase family M20/M25/M40 K01438 - 3.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 499.0
DYD3_k127_5420352_10 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 GO:0000162,GO:0003674,GO:0003824,GO:0004834,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000003357 262.0
DYD3_k127_5420352_11 anthranilate synthase K01658,K13497 GO:0000162,GO:0003674,GO:0003824,GO:0004049,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005950,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016829,GO:0016830,GO:0016833,GO:0018130,GO:0019438,GO:0019752,GO:0032991,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 2.4.2.18,4.1.3.27 0.00000000000000000000000000000000000000000000000000002331 205.0
DYD3_k127_5420352_12 Transposase domain (DUF772) - - - 0.0000000000000000000000000000000000000000000000009861 182.0
DYD3_k127_5420352_13 Diaminopropionate ammonia-lyase K01751 - 4.3.1.15 0.0000000000000000000000000000000000000000000003487 178.0
DYD3_k127_5420352_14 Domain of unknown function (DU1801) - - - 0.0000000000000000000000000000000000000008231 152.0
DYD3_k127_5420352_2 COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase K03856,K04516 - 2.5.1.54,5.4.99.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006169 446.0
DYD3_k127_5420352_3 Belongs to the TrpC family K01609,K13498 - 4.1.1.48,5.3.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007795 456.0
DYD3_k127_5420352_4 Peptidase dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003593 445.0
DYD3_k127_5420352_5 Aminotransferase class-V - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007989 434.0
DYD3_k127_5420352_6 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657,K13503 GO:0000162,GO:0003674,GO:0003824,GO:0004049,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005950,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016829,GO:0016830,GO:0016833,GO:0018130,GO:0019438,GO:0019752,GO:0032991,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002554 427.0
DYD3_k127_5420352_7 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000803 400.0
DYD3_k127_5420352_8 Ornithine cyclodeaminase/mu-crystallin family K01750,K19244 - 1.4.1.1,4.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002009 325.0
DYD3_k127_5420352_9 Pyridoxal-phosphate dependent enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000491 301.0
DYD3_k127_543913_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002217 572.0
DYD3_k127_543913_1 Membrane-bound dehydrogenase domain K09992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 521.0
DYD3_k127_543913_10 Periplasmic binding protein K02016 - - 0.00000000000000000000000000000000001836 142.0
DYD3_k127_543913_11 Cytochrome c - - - 0.00000000000000000000000000000134 137.0
DYD3_k127_543913_12 PTS system mannose/fructose/sorbose family IID component K02796 - - 0.00000000000000000000000000000308 132.0
DYD3_k127_543913_13 PTS system sorbose-specific iic component K02795 - - 0.000000000000000000000002984 113.0
DYD3_k127_543913_14 Phosphotransferase System K11189 - - 0.0000000000000000000002 100.0
DYD3_k127_543913_15 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.000000000000000000009182 101.0
DYD3_k127_543913_16 PFAM Copper binding proteins, plastocyanin azurin family - - - 0.00000000001419 76.0
DYD3_k127_543913_17 PTS system fructose IIA component K02744 - - 0.0000000005493 71.0
DYD3_k127_543913_18 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006417,GO:0006448,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015935,GO:0017148,GO:0019222,GO:0022626,GO:0022627,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0043021,GO:0043022,GO:0043024,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0045900,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:1990904,GO:2000112,GO:2000113 - 0.000004329 57.0
DYD3_k127_543913_19 Membrane-bound dehydrogenase domain K09992 - - 0.0005464 46.0
DYD3_k127_543913_2 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0016740,GO:0016765,GO:0019899,GO:0030312,GO:0035375,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 2.5.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004765 455.0
DYD3_k127_543913_3 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003317 417.0
DYD3_k127_543913_4 PEP-utilising enzyme, N-terminal K08483 - 2.7.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002256 396.0
DYD3_k127_543913_5 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001696 378.0
DYD3_k127_543913_6 Lumazine binding domain K00793 - 2.5.1.9 0.000000000000000000000000000000000000000000000000001276 188.0
DYD3_k127_543913_7 Bifunctional nuclease K08999 - - 0.000000000000000000000000000000000000000000003853 169.0
DYD3_k127_543913_8 PTS system sorbose subfamily IIB component K19507 - - 0.0000000000000000000000000000000000000000001829 164.0
DYD3_k127_543913_9 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.0000000000000000000000000000000000000249 148.0
DYD3_k127_5483767_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005574 574.0
DYD3_k127_5483767_1 Type II/IV secretion system protein K02283,K20527 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003945 538.0
DYD3_k127_5483767_10 ABC transporter K02056 - 3.6.3.17 0.000000000000000000000000000000000000000000000000001265 205.0
DYD3_k127_5483767_11 HD domain K01139 - 2.7.6.5,3.1.7.2 0.000000000000000000000000000000000000000000000000526 181.0
DYD3_k127_5483767_12 PFAM SAF domain K02279 - - 0.0000000000000000000000000000000000000000000004643 177.0
DYD3_k127_5483767_13 AAA domain K02282 - - 0.000000000000000000000000000000000000000000001158 181.0
DYD3_k127_5483767_14 SnoaL-like polyketide cyclase - - - 0.00000000000000000000000000000000001672 139.0
DYD3_k127_5483767_15 Branched-chain amino acid transport system / permease component K02057 - - 0.000000000000000000000000000003777 130.0
DYD3_k127_5483767_16 Uncharacterized ACR, COG1430 K09005 - - 0.00000000000000000000000004641 111.0
DYD3_k127_5483767_17 methylamine metabolic process K15977 - - 0.0000000000000000000000001641 111.0
DYD3_k127_5483767_18 PFAM Peptidase family M23 - - - 0.0000000000000000000000007369 115.0
DYD3_k127_5483767_19 Protein of unknown function DUF86 - - - 0.0000000000000000001385 93.0
DYD3_k127_5483767_2 PFAM AAA ATPase central domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000217 402.0
DYD3_k127_5483767_20 ABC transporter substrate-binding protein PnrA-like K07335 - - 0.0000000000006601 74.0
DYD3_k127_5483767_21 Integral membrane protein CcmA involved in cell shape determination - - - 0.0000000000006692 79.0
DYD3_k127_5483767_22 Peptidase A24A, prepilin type IV K02278 - 3.4.23.43 0.000000000001598 75.0
DYD3_k127_5483767_23 Putative Flp pilus-assembly TadE/G-like - - - 0.00000000004835 75.0
DYD3_k127_5483767_24 TadE-like protein - - - 0.00000002121 66.0
DYD3_k127_5483767_25 TIGRFAM TIGR00725 family protein K06966 - 3.2.2.10 0.0000003993 59.0
DYD3_k127_5483767_26 Putative Flp pilus-assembly TadE/G-like - - - 0.000001588 60.0
DYD3_k127_5483767_3 Cellulose biosynthesis protein BcsQ K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004927 350.0
DYD3_k127_5483767_4 Belongs to the GSP D family K02280 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008344 286.0
DYD3_k127_5483767_5 Belongs to the GTP cyclohydrolase I type 2 NIF3 family K22391 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0009314,GO:0009628,GO:0010212,GO:0042802,GO:0043167,GO:0043169,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0050896 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000005008 243.0
DYD3_k127_5483767_6 Belongs to the ParB family K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000007216 241.0
DYD3_k127_5483767_7 IMG reference gene - - - 0.000000000000000000000000000000000000000000000000000000007774 217.0
DYD3_k127_5483767_8 Type II secretion system K12511 - - 0.00000000000000000000000000000000000000000000000000001229 200.0
DYD3_k127_5483767_9 type II secretion system protein K12510 - - 0.00000000000000000000000000000000000000000000000000002554 199.0
DYD3_k127_5487077_0 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K02564 - 3.5.99.6 2.773e-285 888.0
DYD3_k127_5487077_1 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.17 4.645e-267 833.0
DYD3_k127_5487077_10 Fatty acid desaturase K10255 - 1.14.19.23,1.14.19.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002797 381.0
DYD3_k127_5487077_11 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007919 273.0
DYD3_k127_5487077_12 acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000978 243.0
DYD3_k127_5487077_13 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000002326 226.0
DYD3_k127_5487077_15 Dienelactone hydrolase family - - - 0.00000000000000000000000000000000000000000000003599 176.0
DYD3_k127_5487077_16 Protein of unknown function, DUF - - - 0.000000000000000000000000000000000000000006103 159.0
DYD3_k127_5487077_17 Putative lumazine-binding - - - 0.0000000000000000000000000000007573 130.0
DYD3_k127_5487077_18 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000001309 124.0
DYD3_k127_5487077_19 Protein of unknown function (DUF2911) - - - 0.0000000000000000000000001182 116.0
DYD3_k127_5487077_2 elongation factor G K02355 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006790,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0030312,GO:0044237,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001542 614.0
DYD3_k127_5487077_3 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 586.0
DYD3_k127_5487077_4 Rhodanese Homology Domain K01069,K03797 - 3.1.2.6,3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001507 501.0
DYD3_k127_5487077_5 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003278 486.0
DYD3_k127_5487077_6 polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 449.0
DYD3_k127_5487077_7 Carbon-nitrogen hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000317 428.0
DYD3_k127_5487077_8 protein kinase activity K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004184 457.0
DYD3_k127_5487077_9 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 406.0
DYD3_k127_5507494_0 von Willebrand factor (vWF) type A domain - - - 0.0 1385.0
DYD3_k127_5507494_1 PQQ-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002244 624.0
DYD3_k127_5507494_10 PFAM regulator of chromosome condensation, RCC1 - - - 0.00000000000000000000000002846 124.0
DYD3_k127_5507494_11 WD40-like Beta Propeller Repeat K03641 - - 0.000000000000000000000003569 119.0
DYD3_k127_5507494_12 Involved in the tonB-independent uptake of proteins K03641 - - 0.0000000000000000000007504 108.0
DYD3_k127_5507494_13 ECF sigma factor - - - 0.000000000000000000001003 99.0
DYD3_k127_5507494_14 WD40-like Beta Propeller Repeat K03641,K08676 - - 0.000000000000000000003369 108.0
DYD3_k127_5507494_15 Bacterial transcriptional activator domain K12132 - 2.7.11.1 0.0000000241 61.0
DYD3_k127_5507494_16 Protein kinase domain K12132 - 2.7.11.1 0.0000002526 55.0
DYD3_k127_5507494_2 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004567 406.0
DYD3_k127_5507494_3 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002307 337.0
DYD3_k127_5507494_4 Di-haem oxidoreductase, putative peroxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000865 237.0
DYD3_k127_5507494_5 - - - - 0.000000000000000000000000000000000000000000000000004816 195.0
DYD3_k127_5507494_6 - - - - 0.0000000000000000000000000000000000000000000002588 175.0
DYD3_k127_5507494_7 WD40 domain protein beta Propeller K03641 - - 0.0000000000000000000000000000000000000000005756 177.0
DYD3_k127_5507494_8 Ion transport 2 domain protein - - - 0.000000000000000000000000000000000188 139.0
DYD3_k127_5507494_9 amino acid activation for nonribosomal peptide biosynthetic process K05996 - 3.4.17.18 0.000000000000000000000000000000012 147.0
DYD3_k127_5516465_0 ASPIC UnbV domain protein - - - 0.0 1608.0
DYD3_k127_5516465_1 TrkA-C domain K03455 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002656 586.0
DYD3_k127_5516465_2 cell adhesion involved in biofilm formation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007047 256.0
DYD3_k127_5605037_0 CAAX protease self-immunity K07052 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003314 603.0
DYD3_k127_5605037_1 WD40-like Beta Propeller Repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004633 415.0
DYD3_k127_5605037_2 Signal peptidase, peptidase S26 K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000000000000000005317 244.0
DYD3_k127_5605037_3 Redoxin K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000003096 204.0
DYD3_k127_5605037_4 Cytochrome P460 - - - 0.00000000000000000000000000000000000001984 151.0
DYD3_k127_5605037_5 Zn_pept - - - 0.00000000000000000000005398 102.0
DYD3_k127_5605037_6 Peptidoglycan-synthase activator LpoB - - - 0.000000000000000004326 97.0
DYD3_k127_5605037_7 - - - - 0.00000000000009273 84.0
DYD3_k127_5630517_0 phosphatidate phosphatase activity K09474 - 3.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003956 470.0
DYD3_k127_5630517_1 Penicillin amidase K07116 - 3.5.1.97 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008736 477.0
DYD3_k127_5630517_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007685 393.0
DYD3_k127_5630517_3 Pfam:SusD K21572 - - 0.0000000000000000000000000000000000000000000000002219 179.0
DYD3_k127_5671160_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008554 611.0
DYD3_k127_5671160_1 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003587 611.0
DYD3_k127_5671160_10 protein kinase activity - - - 0.0000000000000000000000000004113 128.0
DYD3_k127_5671160_2 DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004855 556.0
DYD3_k127_5671160_3 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001663 511.0
DYD3_k127_5671160_4 succinylglutamate desuccinylase aspartoacylase K06987 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003756 346.0
DYD3_k127_5671160_5 CYTH - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 332.0
DYD3_k127_5671160_6 Serine/threonine phosphatases, family 2C, catalytic domain K01090,K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002737 278.0
DYD3_k127_5671160_7 PFAM nucleoside H symporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004493 274.0
DYD3_k127_5671160_8 protein kinase activity K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000004922 261.0
DYD3_k127_5671160_9 Serine/threonine phosphatases, family 2C, catalytic domain K01090,K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000227 259.0
DYD3_k127_5679140_0 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023 382.0
DYD3_k127_5679140_1 PFAM nitrogen-fixing NifU domain protein - - - 0.000000000001412 74.0
DYD3_k127_5679140_2 DHH family K06881 - 3.1.13.3,3.1.3.7 0.00000002203 57.0
DYD3_k127_5727129_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138,K18307 - - 1.552e-296 941.0
DYD3_k127_5743027_0 TIGRFAM DNA polymerase III, alpha subunit K02337,K14162 - 2.7.7.7 1.247e-304 972.0
DYD3_k127_5743027_1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 - 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004286 595.0
DYD3_k127_5743027_10 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.000000000000000000000000000000000000000000000000000000000000000000006572 241.0
DYD3_k127_5743027_11 Oxidoreductase molybdopterin binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000001577 241.0
DYD3_k127_5743027_12 domain, Protein K01179,K07260,K13735 - 3.2.1.4,3.4.17.14 0.00000000000000000000000000000000000000000000000000000000000004591 235.0
DYD3_k127_5743027_13 PFAM Peptidase M23 - - - 0.0000000000000000000000000000000000000002859 162.0
DYD3_k127_5743027_2 tRNA synthetases class I (M) K01874 - 6.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000283 525.0
DYD3_k127_5743027_3 Transketolase, pyrimidine binding domain K00162 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 460.0
DYD3_k127_5743027_4 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001858 421.0
DYD3_k127_5743027_5 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006265 413.0
DYD3_k127_5743027_6 PFAM peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008395 409.0
DYD3_k127_5743027_7 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004584 390.0
DYD3_k127_5743027_8 PSP1 C-terminal conserved region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004054 310.0
DYD3_k127_5743027_9 Putative aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002682 254.0
DYD3_k127_5815681_0 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003329 550.0
DYD3_k127_5815681_1 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003369 514.0
DYD3_k127_5815681_2 protein kinase activity K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000001603 243.0
DYD3_k127_5815681_3 PFAM Uncharacterised protein family UPF0150 - - - 0.000000000000000000000003974 106.0
DYD3_k127_5815681_4 PFAM YcfA-like protein - - - 0.0000000008166 61.0
DYD3_k127_5815681_5 - - - - 0.0000002493 54.0
DYD3_k127_5815681_6 - - - - 0.0000003704 53.0
DYD3_k127_5815681_7 cellulose binding - - - 0.000004404 50.0
DYD3_k127_5863331_0 AcrB/AcrD/AcrF family K03296 - - 0.0 1221.0
DYD3_k127_5863331_1 AcrB/AcrD/AcrF family K03296 - - 8.831e-242 770.0
DYD3_k127_5863331_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 408.0
DYD3_k127_5863331_3 CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin) K12340 - - 0.000000000000000000000000000000000000000000004324 180.0
DYD3_k127_5863331_4 amine dehydrogenase activity - - - 0.000000000002299 79.0
DYD3_k127_5863331_5 NHL repeat - - - 0.00005042 55.0
DYD3_k127_5901107_0 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01006 - 2.7.9.1 0.0 1066.0
DYD3_k127_5901107_1 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 1.349e-260 828.0
DYD3_k127_5901107_10 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000008159 267.0
DYD3_k127_5901107_11 AIR carboxylase K06898 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001439 269.0
DYD3_k127_5901107_12 Mediates influx of magnesium ions K03284 - - 0.0000000000000000000000000000000000000000000000000000000000000000001598 241.0
DYD3_k127_5901107_13 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.0000000000000000000000000000000000000000000000000000000000000000003451 238.0
DYD3_k127_5901107_14 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000000001242 223.0
DYD3_k127_5901107_15 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.00000000000000000000000000000000000000000000000000000000737 202.0
DYD3_k127_5901107_16 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.00000000000000000000000000000000000000000000000000002054 192.0
DYD3_k127_5901107_17 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02806 - - 0.0000000000000000000000000000000000000000000312 165.0
DYD3_k127_5901107_18 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000005959 157.0
DYD3_k127_5901107_19 COG2199 FOG GGDEF domain - - - 0.0000000000000000000000000002045 130.0
DYD3_k127_5901107_2 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 4.797e-202 649.0
DYD3_k127_5901107_20 Protein of unknown function (DUF2911) - - - 0.000000000000000000000000001641 120.0
DYD3_k127_5901107_21 HEAT repeats - - - 0.000000000000000000000001897 119.0
DYD3_k127_5901107_22 23S rRNA-intervening sequence protein - - - 0.00000000000000000008215 92.0
DYD3_k127_5901107_23 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000002417 89.0
DYD3_k127_5901107_24 Transcription factor zinc-finger K09981 - - 0.0000000000000000009852 92.0
DYD3_k127_5901107_25 ribosomal protein - - - 0.00002705 49.0
DYD3_k127_5901107_3 Adenylosuccinate lyase C-terminus K01756 - 4.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 565.0
DYD3_k127_5901107_4 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002017 547.0
DYD3_k127_5901107_5 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008799 461.0
DYD3_k127_5901107_6 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001791 398.0
DYD3_k127_5901107_7 SAICAR synthetase K01923 - 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002539 383.0
DYD3_k127_5901107_8 Trypsin K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005124 373.0
DYD3_k127_5901107_9 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000003625 273.0
DYD3_k127_5922598_0 Leucyl-tRNA synthetase, Domain 2 K01869 - 6.1.1.4 0.0 1053.0
DYD3_k127_5922598_1 PFAM peptidase S45 penicillin amidase K01434 - 3.5.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001995 626.0
DYD3_k127_5922598_10 membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002404 343.0
DYD3_k127_5922598_11 Phospholipase D. Active site motifs. K06131 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 342.0
DYD3_k127_5922598_12 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009167 318.0
DYD3_k127_5922598_13 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000995 282.0
DYD3_k127_5922598_14 DNA ligase K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003894 286.0
DYD3_k127_5922598_15 Biotin-lipoyl like K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002592 282.0
DYD3_k127_5922598_16 Serine aminopeptidase, S33 K01259 - 3.4.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000007573 257.0
DYD3_k127_5922598_17 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.0000000000000000000000000000000000000000000000000000000000000000002065 234.0
DYD3_k127_5922598_18 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000003356 233.0
DYD3_k127_5922598_19 Outer membrane efflux protein K12340 - - 0.00000000000000000000000000000000000000000000000000000000000001137 234.0
DYD3_k127_5922598_2 Protein of unknown function, DUF255 K06888 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002788 502.0
DYD3_k127_5922598_20 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000000000000000000000002418 224.0
DYD3_k127_5922598_21 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:0140096,GO:1901564 5.2.1.8 0.000000000000000000000000000000000000000000000000001091 197.0
DYD3_k127_5922598_22 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000559 159.0
DYD3_k127_5922598_23 ECF sigma factor K03088 - - 0.00000000000000000000000000000000000008784 154.0
DYD3_k127_5922598_24 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000095 145.0
DYD3_k127_5922598_25 Eukaryotic integral membrane protein (DUF1751) K09650 - 3.4.21.105 0.0000000000000000000000000000000002462 144.0
DYD3_k127_5922598_26 GAF domain-containing protein K08968 - 1.8.4.14 0.000000000000000000000003087 109.0
DYD3_k127_5922598_27 - - - - 0.0000000000000000001053 93.0
DYD3_k127_5922598_28 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.000000000000000001824 94.0
DYD3_k127_5922598_29 DNA-templated transcription, initiation K03088 - - 0.00000000000000004189 87.0
DYD3_k127_5922598_3 Pyridoxal-dependent decarboxylase conserved domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007819 476.0
DYD3_k127_5922598_30 PDZ domain - - - 0.000000000000004419 87.0
DYD3_k127_5922598_31 DNA-templated transcription, initiation K03088 - - 0.00000000009101 70.0
DYD3_k127_5922598_32 Protein of unknown function (DUF3187) - - - 0.0000000001883 72.0
DYD3_k127_5922598_33 - - - - 0.0000001147 57.0
DYD3_k127_5922598_34 Serine threonine protein kinase - - - 0.000004617 50.0
DYD3_k127_5922598_4 PHP domain protein K02347 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022 448.0
DYD3_k127_5922598_5 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002214 436.0
DYD3_k127_5922598_6 Multicopper oxidase K00368,K22348 - 1.16.3.3,1.7.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005068 416.0
DYD3_k127_5922598_7 PFAM Sodium sulfate symporter transmembrane region K14445 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002394 400.0
DYD3_k127_5922598_8 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002512 376.0
DYD3_k127_5922598_9 cellular manganese ion homeostasis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000401 361.0
DYD3_k127_5961139_0 peptidase - - - 2.018e-222 708.0
DYD3_k127_5961139_1 Pantothenic acid kinase K00867 GO:0003674,GO:0003824,GO:0004594,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002938 421.0
DYD3_k127_5961139_2 Metallo-beta-lactamase superfamily K17837 - 3.5.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003965 280.0
DYD3_k127_5961139_3 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.0000000000000000000000000000000000000000000000002094 186.0
DYD3_k127_5961139_4 response to heat - - - 0.000000000000000000000000000000000006352 140.0
DYD3_k127_5961139_5 SnoaL-like domain - - - 0.000003158 55.0
DYD3_k127_597034_0 Uncharacterised protein family (UPF0182) K09118 GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 2.538e-239 769.0
DYD3_k127_597034_1 Fic/DOC family N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007194 437.0
DYD3_k127_597034_10 - - - - 0.0000000000004545 73.0
DYD3_k127_597034_12 - - - - 0.00002544 54.0
DYD3_k127_597034_13 Protein of unknown function (DUF1700) - - - 0.0003094 52.0
DYD3_k127_597034_14 Type ii and iii secretion system protein - - - 0.0008646 51.0
DYD3_k127_597034_2 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005279 425.0
DYD3_k127_597034_3 UbiA prenyltransferase family K03179 - 2.5.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002159 318.0
DYD3_k127_597034_4 ECF sigma factor K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007014 263.0
DYD3_k127_597034_5 Belongs to the alkaline phosphatase family K01077 - 3.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000006268 259.0
DYD3_k127_597034_6 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000001837 197.0
DYD3_k127_597034_7 - - - - 0.0000000000000000000000000000002472 126.0
DYD3_k127_597034_8 - - - - 0.000000000000004839 84.0
DYD3_k127_5992451_0 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004677 310.0
DYD3_k127_5992451_1 Outer membrane protein beta-barrel domain - - - 0.0000000000000007958 86.0
DYD3_k127_5992451_2 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00001479 50.0
DYD3_k127_60053_0 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004519 592.0
DYD3_k127_60053_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000025 377.0
DYD3_k127_60053_2 Surface antigen K07277 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001664 350.0
DYD3_k127_60053_3 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000132 300.0
DYD3_k127_60053_4 Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.000000000000000000000000000000000000000000000000000000000000001553 225.0
DYD3_k127_60053_5 FAD linked oxidases, C-terminal domain K11472 - - 0.0000000000000000000000000000000000000006103 164.0
DYD3_k127_60053_6 4Fe-4S binding domain K11473 - - 0.000000000000000000000000000000000009444 143.0
DYD3_k127_60053_7 ATP-dependent protease La (LON) substrate-binding domain K01338 - 3.4.21.53 0.00000000000000000000000000000000001399 143.0
DYD3_k127_6039872_0 membrane organization - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009222 608.0
DYD3_k127_6039872_1 response regulator K07782 - - 0.0000000000000000000000000000000000000000000000000000000000000000000976 236.0
DYD3_k127_6039872_2 Methyltransferase domain K15256 - - 0.000000000000000000000000000000000000000000000003762 182.0
DYD3_k127_6039872_3 PFAM glycoside hydrolase 15-related - - - 0.00000000000000000000000000000000000000000000001053 177.0
DYD3_k127_6039872_4 DinB family - - - 0.00000000000001334 76.0
DYD3_k127_6039872_6 helix_turn_helix, Lux Regulon - - - 0.000002726 56.0
DYD3_k127_6039872_7 Transcriptional regulator K03556 - - 0.00002294 51.0
DYD3_k127_6039872_8 Apolipoprotein A1/A4/E domain - - - 0.0000898 51.0
DYD3_k127_6070949_0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain K01955 - 6.3.5.5 0.0 1579.0
DYD3_k127_6070949_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1272.0
DYD3_k127_6070949_10 PFAM NAD-dependent epimerase dehydratase K15856 - 1.1.1.281 0.000000000000000000000000000000000000000000000000000001336 203.0
DYD3_k127_6070949_11 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain K00075 - 1.3.1.98 0.000000000000000000000000000000000000000000000000000002507 217.0
DYD3_k127_6070949_12 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.00000000000000000000000000000000000000000000000000005184 192.0
DYD3_k127_6070949_13 EVE domain - - - 0.000000000000000000000000000000000000000000000003315 176.0
DYD3_k127_6070949_14 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.00000000000000000000000000000000000000005152 158.0
DYD3_k127_6070949_15 Tetratricopeptide repeat - - - 0.00000000000000000000000000000002697 136.0
DYD3_k127_6070949_16 Outer membrane lipoprotein K05807 - - 0.000000000000000000000003936 111.0
DYD3_k127_6070949_17 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.000000000000000000000009089 108.0
DYD3_k127_6070949_18 ATPase or kinase K06925 - - 0.000000000000000000001348 106.0
DYD3_k127_6070949_19 peptidoglycan-binding protein, lysm - - - 0.000000000000000003622 97.0
DYD3_k127_6070949_2 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 6.443e-311 972.0
DYD3_k127_6070949_20 Glycoprotease family K01409,K14742 GO:0002949,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.00000000000000004906 91.0
DYD3_k127_6070949_21 DinB family - - - 0.000000000000002676 83.0
DYD3_k127_6070949_3 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 6.928e-287 898.0
DYD3_k127_6070949_4 UDP binding domain K13015 - 1.1.1.136 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002466 559.0
DYD3_k127_6070949_5 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000026 507.0
DYD3_k127_6070949_6 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003077 487.0
DYD3_k127_6070949_7 PFAM NAD-dependent epimerase dehydratase K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005816 484.0
DYD3_k127_6070949_8 O-acyltransferase activity K13018 - 2.3.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003851 271.0
DYD3_k127_6070949_9 RadC-like JAB domain K03630 - - 0.00000000000000000000000000000000000000000000000000000000000000000001262 240.0
DYD3_k127_6086382_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1137.0
DYD3_k127_6086382_1 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000033 606.0
DYD3_k127_6086382_2 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000004272 254.0
DYD3_k127_6086382_3 Thioredoxin-like - - - 0.0000000000000000000000000000001864 132.0
DYD3_k127_6086382_4 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.000000000000000000000002372 112.0
DYD3_k127_6086382_5 peptidyl-tyrosine sulfation - - - 0.00000001443 68.0
DYD3_k127_6086382_6 Redoxin K03564 - 1.11.1.15 0.000004679 56.0
DYD3_k127_6086382_7 Bacterial Ig-like domain 2 - - - 0.00001142 51.0
DYD3_k127_6197573_0 radical SAM domain protein - - - 2.099e-217 686.0
DYD3_k127_6197573_1 TonB-dependent Receptor Plug Domain K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008631 392.0
DYD3_k127_6197573_2 Integral membrane protein CcmA involved in cell shape determination - - - 0.000000000000000000000000000000000000000000002208 171.0
DYD3_k127_6197573_3 - - - - 0.00000000000000000000000000000000000000000001368 166.0
DYD3_k127_6197573_4 Uncharacterized conserved protein (COG2071) K09166 - - 0.0000000000000000000000000000000000000000000244 178.0
DYD3_k127_6197573_5 methylamine metabolic process K15977 - - 0.0000000000000000000000000000000000000000005058 162.0
DYD3_k127_6197573_6 DNA-binding transcription factor activity - - - 0.000000000000000000000000000000000000001921 152.0
DYD3_k127_6197573_7 Predicted membrane protein (DUF2214) K08983 - - 0.000000000000000000000000002347 115.0
DYD3_k127_625914_0 HELICc2 K03722 - 3.6.4.12 1.436e-279 882.0
DYD3_k127_625914_1 Involved in the tonB-independent uptake of proteins - - - 2.06e-260 843.0
DYD3_k127_625914_10 Aminotransferase class I and II K10206 - 2.6.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001313 434.0
DYD3_k127_625914_11 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 GO:0003674,GO:0003824,GO:0004125,GO:0006139,GO:0006399,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016740,GO:0016785,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034654,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097056,GO:0140098,GO:0140101,GO:1901360,GO:1901362,GO:1901576 2.9.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003716 403.0
DYD3_k127_625914_12 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001795 387.0
DYD3_k127_625914_13 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003554 390.0
DYD3_k127_625914_14 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009019 391.0
DYD3_k127_625914_15 Required for chromosome condensation and partitioning K03529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001783 367.0
DYD3_k127_625914_16 Protein kinase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006114 363.0
DYD3_k127_625914_17 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003108 337.0
DYD3_k127_625914_18 Domain of unknown function (DUF4159) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 289.0
DYD3_k127_625914_19 Secretion protein K01993 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003596 287.0
DYD3_k127_625914_2 Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na( ) movement across the membrane K15987 - 3.6.1.1 1.316e-248 784.0
DYD3_k127_625914_20 nuclear chromosome segregation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002572 306.0
DYD3_k127_625914_21 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000006566 261.0
DYD3_k127_625914_22 Fumarylacetoacetate (FAA) hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004682 249.0
DYD3_k127_625914_23 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000002279 244.0
DYD3_k127_625914_24 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000001986 233.0
DYD3_k127_625914_25 Two-component sensor kinase N-terminal K02484 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000006889 228.0
DYD3_k127_625914_26 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.0000000000000000000000000000000000000000000000000000000001876 209.0
DYD3_k127_625914_27 - - - - 0.0000000000000000000000000000000000000000000000000000000006214 214.0
DYD3_k127_625914_28 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.00000000000000000000000000000000000000000003336 169.0
DYD3_k127_625914_29 HAD-hyrolase-like K03273 - 3.1.3.82,3.1.3.83 0.0000000000000000000000000000000000000000008086 168.0
DYD3_k127_625914_3 COG1858 Cytochrome c peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001539 557.0
DYD3_k127_625914_30 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.000000000000000000000000000000000000000008096 165.0
DYD3_k127_625914_31 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.0000000000000000000000000000000000000001702 170.0
DYD3_k127_625914_32 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K05606 - 5.1.99.1 0.0000000000000000000000000000000000000002161 161.0
DYD3_k127_625914_33 Binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000001313 155.0
DYD3_k127_625914_34 Thioredoxin-like domain K03671 - - 0.0000000000000000000000000000000000371 137.0
DYD3_k127_625914_35 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000000000007026 136.0
DYD3_k127_625914_36 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0000000000000000000000000001363 130.0
DYD3_k127_625914_38 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.000000000000000000000000004707 117.0
DYD3_k127_625914_39 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division K20543 - - 0.000000000000000000000000007218 129.0
DYD3_k127_625914_4 AICARFT/IMPCHase bienzyme K00602 - 2.1.2.3,3.5.4.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004368 559.0
DYD3_k127_625914_40 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000001335 128.0
DYD3_k127_625914_41 CarboxypepD_reg-like domain - - - 0.00000000000000000000002322 111.0
DYD3_k127_625914_42 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.00000000000000000000002397 102.0
DYD3_k127_625914_43 Bacterial regulatory proteins, tetR family - - - 0.0000000000001755 78.0
DYD3_k127_625914_44 ketosteroid isomerase - - - 0.0000000000005755 71.0
DYD3_k127_625914_46 - - - - 0.00000001289 66.0
DYD3_k127_625914_47 Outer membrane efflux protein - - - 0.00000006554 65.0
DYD3_k127_625914_48 - - - - 0.000001667 59.0
DYD3_k127_625914_49 - - - - 0.000007097 54.0
DYD3_k127_625914_5 secondary active sulfate transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009393 527.0
DYD3_k127_625914_50 - - - - 0.00001219 52.0
DYD3_k127_625914_51 - - - - 0.00001809 58.0
DYD3_k127_625914_52 3-carboxymuconate cyclase K07404 - 3.1.1.31 0.0007117 52.0
DYD3_k127_625914_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007674 507.0
DYD3_k127_625914_7 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002022 503.0
DYD3_k127_625914_8 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 470.0
DYD3_k127_625914_9 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007102 432.0
DYD3_k127_6266797_0 Anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor) K17763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002444 425.0
DYD3_k127_6266797_1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07712 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008392 329.0
DYD3_k127_6266797_10 Domain of unknown function (DUF4142) K08995 - - 0.00000002535 55.0
DYD3_k127_6266797_12 transcriptional regulator, SARP family - - - 0.0001584 54.0
DYD3_k127_6266797_2 Psort location Cytoplasmic, score - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004629 279.0
DYD3_k127_6266797_3 Sigma factor PP2C-like phosphatases - - - 0.000000000000000000000000000000000000000001696 163.0
DYD3_k127_6266797_4 polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000006579 164.0
DYD3_k127_6266797_5 STAS domain K17762 - - 0.00000000000000000000000000000000000000002323 157.0
DYD3_k127_6266797_6 Histidine kinase-like ATPase domain K17752 - 2.7.11.1 0.000000000000000000000000000000000001439 145.0
DYD3_k127_6266797_7 UDP-4-amino-4-deoxy-L-arabinose aminotransferase K13010 - 2.6.1.102 0.0000000000000000006731 90.0
DYD3_k127_6266797_8 AAA domain - - - 0.0000000000013 70.0
DYD3_k127_6266797_9 - - - - 0.00000000001387 72.0
DYD3_k127_6270643_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K02567 - - 3.214e-297 933.0
DYD3_k127_6270643_1 Belongs to the NiFe NiFeSe hydrogenase large subunit family K06281 - 1.12.99.6 4.814e-237 745.0
DYD3_k127_6270643_10 PFAM peptidase M52 hydrogen uptake protein K03605 - - 0.0000000000000000000000000000000003639 139.0
DYD3_k127_6270643_11 Cytochrome c7 and related cytochrome c - - - 0.00000000000000000000001386 110.0
DYD3_k127_6270643_12 Alpha/beta hydrolase family K01259 - 3.4.11.5 0.0000000000000000000005629 107.0
DYD3_k127_6270643_13 - - - - 0.000000000000000001303 94.0
DYD3_k127_6270643_14 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 GO:0003674,GO:0003824,GO:0004644,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0016740,GO:0016741,GO:0016742,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716 2.1.2.2 0.0000000000001605 80.0
DYD3_k127_6270643_15 Protein of unknown function (DUF2892) - - - 0.0000000001319 71.0
DYD3_k127_6270643_2 Belongs to the carbamoyltransferase HypF family K04656 - - 2.177e-203 666.0
DYD3_k127_6270643_3 Polysulphide reductase, NrfD K00185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009876 479.0
DYD3_k127_6270643_4 4Fe-4S dicluster domain K00184 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000306 433.0
DYD3_k127_6270643_5 small subunit K06282 - 1.12.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003935 431.0
DYD3_k127_6270643_6 PFAM cobalamin synthesis protein P47K K04652 - - 0.00000000000000000000000000000000000000000000000000000000000000003214 231.0
DYD3_k127_6270643_7 respiratory electron transport chain K03620 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006113,GO:0008150,GO:0008152,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0020037,GO:0031224,GO:0031226,GO:0032991,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0044569,GO:0045333,GO:0046906,GO:0048037,GO:0055114,GO:0071944,GO:0097159,GO:1901363,GO:1902494 - 0.000000000000000000000000000000000000000000000000000000007014 217.0
DYD3_k127_6270643_8 - - - - 0.0000000000000000000000000000000000000000000000003307 186.0
DYD3_k127_6270643_9 anaerobic respiration K02568 - - 0.000000000000000000000000000000000008316 149.0
DYD3_k127_6329550_0 response regulator K07782 - - 0.0000000000000000000000000000000000000000000000000000000000000000000593 239.0
DYD3_k127_6329550_1 - - - - 0.000001727 54.0
DYD3_k127_6329550_2 Cro/C1-type HTH DNA-binding domain - - - 0.0009538 45.0
DYD3_k127_6333575_0 Acetyl xylan esterase (AXE1) - - - 1.431e-298 934.0
DYD3_k127_6333575_1 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003725 432.0
DYD3_k127_6333575_10 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000002462 67.0
DYD3_k127_6333575_11 Bacterial protein of unknown function (DUF885) - - - 0.00000001684 66.0
DYD3_k127_6333575_12 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.000005128 56.0
DYD3_k127_6333575_13 function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex K02116 - - 0.00001029 52.0
DYD3_k127_6333575_2 Nucleotidyl transferase K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007842 417.0
DYD3_k127_6333575_3 HD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000002923 254.0
DYD3_k127_6333575_4 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.0000000000000000000000000000000000000000000000000000000000001486 225.0
DYD3_k127_6333575_5 Cupin domain - - - 0.00000000000000000000000000000000000000000005252 172.0
DYD3_k127_6333575_6 transcriptional regulator, SARP family - - - 0.0000000000000000000000000000000001469 154.0
DYD3_k127_6333575_7 Mannose-6-phosphate isomerase - - - 0.000000000000000000000000000000001533 144.0
DYD3_k127_6333575_8 4 iron, 4 sulfur cluster binding K02572,K02573 - - 0.0000000000000000000000000000001029 135.0
DYD3_k127_6333575_9 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000000000000000000000001597 112.0
DYD3_k127_6374788_0 WD40-like Beta Propeller Repeat - - - 3.61e-226 736.0
DYD3_k127_6374788_1 repeat protein - - - 4.578e-205 664.0
DYD3_k127_6374788_10 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001956 364.0
DYD3_k127_6374788_11 Peptidase S15 K06978 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 372.0
DYD3_k127_6374788_12 amino acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008752 299.0
DYD3_k127_6374788_13 SAM (And some other nucleotide) binding motif - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002612 279.0
DYD3_k127_6374788_14 Lactonase, 7-bladed beta-propeller - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002874 277.0
DYD3_k127_6374788_15 Belongs to the peptidase M20A family. ArgE subfamily K01438 - 3.5.1.16 0.00000000000000000000000000000000000000000000000000000000000003738 242.0
DYD3_k127_6374788_16 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000004706 226.0
DYD3_k127_6374788_17 ATP-independent chaperone mediated protein folding - - - 0.0000000000000000000000000000000000005187 148.0
DYD3_k127_6374788_18 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000000000000001428 136.0
DYD3_k127_6374788_19 - - - - 0.00000000000000001723 97.0
DYD3_k127_6374788_2 Amidohydrolase family K06015 - 3.5.1.81 2.741e-204 663.0
DYD3_k127_6374788_20 - - - - 0.000000000000007626 78.0
DYD3_k127_6374788_21 DinB superfamily - - - 0.0000000008926 70.0
DYD3_k127_6374788_22 regulation of systemic arterial blood pressure by aortic arch baroreceptor feedback K03440,K04828,K04829 GO:0001976,GO:0003008,GO:0003013,GO:0003018,GO:0003025,GO:0003026,GO:0003073,GO:0003674,GO:0005215,GO:0005216,GO:0005248,GO:0005261,GO:0005272,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0007154,GO:0007165,GO:0007267,GO:0007268,GO:0007275,GO:0007399,GO:0007417,GO:0007422,GO:0007600,GO:0007602,GO:0007605,GO:0007606,GO:0008015,GO:0008104,GO:0008150,GO:0008217,GO:0008324,GO:0009268,GO:0009314,GO:0009416,GO:0009581,GO:0009582,GO:0009583,GO:0009605,GO:0009612,GO:0009628,GO:0009987,GO:0010447,GO:0010941,GO:0015075,GO:0015077,GO:0015081,GO:0015267,GO:0015276,GO:0015280,GO:0015318,GO:0015672,GO:0016020,GO:0016021,GO:0019229,GO:0022803,GO:0022834,GO:0022836,GO:0022838,GO:0022839,GO:0022857,GO:0022890,GO:0022898,GO:0023052,GO:0030001,GO:0030425,GO:0031224,GO:0031226,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032879,GO:0033036,GO:0034220,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035150,GO:0035296,GO:0035418,GO:0035690,GO:0035725,GO:0036477,GO:0042221,GO:0042391,GO:0042493,GO:0042981,GO:0042995,GO:0043005,GO:0043025,GO:0043066,GO:0043067,GO:0043069,GO:0043197,GO:0043269,GO:0043270,GO:0044057,GO:0044087,GO:0044089,GO:0044093,GO:0044297,GO:0044309,GO:0044425,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0044736,GO:0045202,GO:0046873,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048731,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0050803,GO:0050807,GO:0050877,GO:0050880,GO:0050896,GO:0050906,GO:0050909,GO:0050915,GO:0050954,GO:0050974,GO:0050982,GO:0051049,GO:0051050,GO:0051094,GO:0051128,GO:0051130,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051606,GO:0051716,GO:0051960,GO:0051962,GO:0051963,GO:0051965,GO:0055085,GO:0060548,GO:0065007,GO:0065008,GO:0065009,GO:0070887,GO:0071214,GO:0071467,GO:0071468,GO:0071944,GO:0090066,GO:0097447,GO:0097458,GO:0097746,GO:0098655,GO:0098660,GO:0098662,GO:0098794,GO:0098916,GO:0099094,GO:0099536,GO:0099537,GO:0104004,GO:0120025,GO:0120038,GO:1903522,GO:1904062,GO:1904064,GO:2000026,GO:2001257,GO:2001259 - 0.000001699 61.0
DYD3_k127_6374788_23 - - - - 0.000005437 53.0
DYD3_k127_6374788_24 Protein of unknown function (DUF433) - - - 0.0003309 53.0
DYD3_k127_6374788_3 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 556.0
DYD3_k127_6374788_4 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 556.0
DYD3_k127_6374788_5 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823 - 2.6.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004187 524.0
DYD3_k127_6374788_6 Peptidase family S58 K01266 - 3.4.11.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004294 468.0
DYD3_k127_6374788_7 Pfam Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000224 389.0
DYD3_k127_6374788_8 Peptidase dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003201 372.0
DYD3_k127_6374788_9 Saccharopine dehydrogenase NADP binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 363.0
DYD3_k127_6374883_0 Amidohydrolase family K06015 - 3.5.1.81 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007394 586.0
DYD3_k127_6374883_1 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001561 420.0
DYD3_k127_6411756_0 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000003818 165.0
DYD3_k127_6411756_1 Histidine kinase - - - 0.00000000000000000000000000000000007948 147.0
DYD3_k127_6411756_2 - - - - 0.0000000000006958 70.0
DYD3_k127_6482798_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 0.0 1039.0
DYD3_k127_6482798_1 Peptidase family M28 - - - 6.64e-220 714.0
DYD3_k127_6482798_10 PFAM phospholipase Carboxylesterase K06999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000008097 244.0
DYD3_k127_6482798_11 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000007887 246.0
DYD3_k127_6482798_12 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K03519 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000008355 243.0
DYD3_k127_6482798_13 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000002427 235.0
DYD3_k127_6482798_14 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.000000000000000000000000000000000000000000000000000000000000001244 228.0
DYD3_k127_6482798_15 COG2116 Formate nitrite family of transporters K21990 - - 0.000000000000000000000000000000000000000000000000000000000000005235 227.0
DYD3_k127_6482798_16 PFAM Proline dehydrogenase K00318 - - 0.00000000000000000000000000000000000000000000000000000000000008488 224.0
DYD3_k127_6482798_17 ATP-dependent DNA helicase activity K03656,K03657 GO:0000018,GO:0000166,GO:0000287,GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009650,GO:0009892,GO:0009987,GO:0010605,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0030312,GO:0030554,GO:0031323,GO:0031324,GO:0032392,GO:0032508,GO:0032552,GO:0032554,GO:0032558,GO:0032564,GO:0032991,GO:0033202,GO:0033554,GO:0034641,GO:0036094,GO:0040007,GO:0042623,GO:0043138,GO:0043140,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0045910,GO:0045934,GO:0046483,GO:0046872,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051276,GO:0051716,GO:0060255,GO:0060542,GO:0060543,GO:0065007,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:0140097,GO:1901265,GO:1901360,GO:1901363,GO:1902494 3.6.4.12 0.00000000000000000000000000000000000000000000000000000002719 226.0
DYD3_k127_6482798_18 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase - - - 0.0000000000000000000000000000000000000000000000003903 188.0
DYD3_k127_6482798_19 VWA domain containing CoxE-like protein K07161 - - 0.000000003283 65.0
DYD3_k127_6482798_2 Malic enzyme, NAD binding domain K00029 - 1.1.1.40 1.675e-195 627.0
DYD3_k127_6482798_20 cellulose binding - - - 0.0005953 46.0
DYD3_k127_6482798_3 TIGRFAM acetyl coenzyme A synthetase (ADP forming), alpha domain K01905,K22224 - 6.2.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 625.0
DYD3_k127_6482798_4 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008293 462.0
DYD3_k127_6482798_5 cobalamin-transporting ATPase activity K02014,K16092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006782 448.0
DYD3_k127_6482798_6 AAA domain (dynein-related subfamily) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004335 388.0
DYD3_k127_6482798_7 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002183 381.0
DYD3_k127_6482798_8 PFAM peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003809 320.0
DYD3_k127_6482798_9 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K15975 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001526 292.0
DYD3_k127_6510930_0 Luciferase-like monooxygenase - - - 0.0 1393.0
DYD3_k127_6510930_1 Ketoacyl-synthetase C-terminal extension - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007782 601.0
DYD3_k127_6510930_10 Bacterial sugar transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000006051 236.0
DYD3_k127_6510930_11 Glycosyl transferase family 21 - - - 0.0000000000000000000000000000000000000000000000000000000000000113 232.0
DYD3_k127_6510930_12 Protein of unknown function (DUF3485) - - - 0.000000000000000000000000000000000000000000000000006999 189.0
DYD3_k127_6510930_13 Cytidylyltransferase K18431 - 2.7.7.82 0.0000000000000000000000000000000005268 145.0
DYD3_k127_6510930_14 polysaccharide export - - - 0.00000000000000000000000007349 117.0
DYD3_k127_6510930_15 IMP dehydrogenase activity K16011 - 2.7.7.13,5.3.1.8 0.0000000000000000000001455 104.0
DYD3_k127_6510930_16 response regulator receiver K03413 - - 0.000000000000000002225 99.0
DYD3_k127_6510930_17 Low molecular weight phosphatase family K01104 - 3.1.3.48 0.000000000000001798 84.0
DYD3_k127_6510930_2 UDP-N-acetylglucosamine 2-epimerase K18429 - 3.2.1.184 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006074 527.0
DYD3_k127_6510930_3 SAF K01654 - 2.5.1.56 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 490.0
DYD3_k127_6510930_4 SAF K01654 - 2.5.1.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008076 483.0
DYD3_k127_6510930_5 UDP-N-acetylglucosamine 2-epimerase K01791,K08068,K18429 - 3.2.1.183,3.2.1.184,5.1.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000276 458.0
DYD3_k127_6510930_6 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004907 344.0
DYD3_k127_6510930_7 Transmembrane exosortase (Exosortase_EpsH) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 321.0
DYD3_k127_6510930_8 Chain length determinant protein K16554 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000673 307.0
DYD3_k127_6510930_9 polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000008231 247.0
DYD3_k127_6515860_0 Two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006093 349.0
DYD3_k127_6515860_1 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000193 344.0
DYD3_k127_6515860_2 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000001493 214.0
DYD3_k127_6515860_3 Histidine kinase K13598 - 2.7.13.3 0.000000000000000000000000000000000000000000004577 183.0
DYD3_k127_6515860_4 anti-sigma regulatory factor K17752 - 2.7.11.1 0.000000000000000000000000000000000000104 147.0
DYD3_k127_6515860_5 cheY-homologous receiver domain - - - 0.0000000000003496 76.0
DYD3_k127_6515860_6 Extracellular solute-binding protein, family 5 K02035 - - 0.00000003268 66.0
DYD3_k127_6515860_7 protein N-acetylglucosaminyltransferase activity - - - 0.0000002351 63.0
DYD3_k127_6525240_0 peptidase dimerisation domain protein K01436 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005213 523.0
DYD3_k127_6525240_1 PFAM amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006847 441.0
DYD3_k127_6525240_2 Heparinase II/III-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002045 432.0
DYD3_k127_6525240_3 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 315.0
DYD3_k127_6525240_4 Formyl transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 293.0
DYD3_k127_6525240_5 Mycothiol maleylpyruvate isomerase N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000005774 220.0
DYD3_k127_6525240_6 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.000000000000000000000000000000000000000000000000000007798 195.0
DYD3_k127_6525240_7 lactoylglutathione lyase activity K00941,K01724,K01759,K07032,K08234 - 2.7.1.49,2.7.4.7,4.2.1.96,4.4.1.5 0.000000000009296 70.0
DYD3_k127_6525240_8 CBS-domain-containing membrane protein K07168 - - 0.000000001078 71.0
DYD3_k127_6545009_0 B12 binding domain K00548 - 2.1.1.13 0.0 1604.0
DYD3_k127_6545009_1 Methylenetetrahydrofolate reductase K00297,K00547 - 1.5.1.20,2.1.1.10 1.991e-242 766.0
DYD3_k127_6545009_2 Belongs to the aldehyde dehydrogenase family K00294 - 1.2.1.88 2.083e-229 734.0
DYD3_k127_6545009_3 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 410.0
DYD3_k127_6545009_4 peptidase S8 and S53, subtilisin, kexin, sedolisin K20754 - 3.4.21.111 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009648 402.0
DYD3_k127_6545009_5 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 378.0
DYD3_k127_6545009_6 tungstate binding K15495 - - 0.0000000000000000000000000000000000000000000000000000000000000000000006003 250.0
DYD3_k127_6545009_7 YGGT family K02221 - - 0.0000000000000000000000000002914 121.0
DYD3_k127_6545009_8 protein involved in tolerance to divalent cations K03926 - - 0.000000000000000000000000003256 113.0
DYD3_k127_6545009_9 Belongs to the UPF0235 family K09131 - - 0.00000000000000003729 94.0
DYD3_k127_6551550_0 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001488 479.0
DYD3_k127_6551550_1 translation initiation factor activity K06996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008861 266.0
DYD3_k127_6551550_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K07032 - - 0.000000000000000000000000000000000000000000000000000000000000000315 227.0
DYD3_k127_6551550_3 hydrolase activity, acting on ester bonds - - - 0.00000000000000000000000000000000000000000000000000000002066 217.0
DYD3_k127_6551550_4 protein kinase activity - - - 0.000000002263 64.0
DYD3_k127_6551550_5 dihydrofolate reductase activity - - - 0.0000003754 61.0
DYD3_k127_6557054_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 7.806e-321 998.0
DYD3_k127_6557054_1 Transport of potassium into the cell K03549 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015672,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0098655,GO:0098660,GO:0098662 - 6.146e-220 703.0
DYD3_k127_6557054_10 water channel activity K02440,K06188,K09874 - - 0.00000000000000000000000000000000000000000000000000000000000009671 222.0
DYD3_k127_6557054_11 CcmB protein K02194 - - 0.000000000000000000000000000000000000000000000000000000000002667 216.0
DYD3_k127_6557054_12 ATPases associated with a variety of cellular activities K02193 - 3.6.3.41 0.000000000000000000000000000000000000000000000001549 183.0
DYD3_k127_6557054_13 DSBA-like thioredoxin domain - - - 0.00000000000000000000000000000000000000000001074 170.0
DYD3_k127_6557054_14 Vitamin K epoxide reductase family - - - 0.000000000000000000000001844 110.0
DYD3_k127_6557054_15 OsmC-like protein K07397 - - 0.0000000000000000000007207 102.0
DYD3_k127_6557054_17 - - - - 0.0000000000000000001967 92.0
DYD3_k127_6557054_18 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 - 2.7.8.41,2.7.8.5 0.000000000000000003701 92.0
DYD3_k127_6557054_19 involved in lipopolysaccharide synthesis - - - 0.00006764 51.0
DYD3_k127_6557054_2 Peptidase dimerisation domain K12941 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 584.0
DYD3_k127_6557054_3 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003218 563.0
DYD3_k127_6557054_4 HlyD family secretion protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001811 531.0
DYD3_k127_6557054_5 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005208 445.0
DYD3_k127_6557054_6 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007211 427.0
DYD3_k127_6557054_7 Insulinase (Peptidase family M16) K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000157 339.0
DYD3_k127_6557054_8 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000009104 259.0
DYD3_k127_6557054_9 Cytochrome C assembly protein K02195 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001294 255.0
DYD3_k127_6565975_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 7.969e-245 765.0
DYD3_k127_6565975_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 9.152e-235 734.0
DYD3_k127_6565975_10 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001563 341.0
DYD3_k127_6565975_11 Short chain fatty acid transporter K02106 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005283 346.0
DYD3_k127_6565975_12 chloride channel K03281 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001457 335.0
DYD3_k127_6565975_13 Coenzyme A transferase K01028 - 2.8.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002151 325.0
DYD3_k127_6565975_14 Coenzyme A transferase K01029 - 2.8.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000094 294.0
DYD3_k127_6565975_15 Permease MlaE K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002935 274.0
DYD3_k127_6565975_16 ABC transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003341 269.0
DYD3_k127_6565975_17 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003296 272.0
DYD3_k127_6565975_18 MlaD protein K02067 - - 0.000000000000000000000000000000000000000000000000000006638 204.0
DYD3_k127_6565975_19 Peptidase family M50 - - - 0.000000000000000000000000000000000000000000000001178 188.0
DYD3_k127_6565975_2 Formate dehydrogenase alpha subunit K00123,K05299 - 1.17.1.10,1.17.1.9 2.81e-226 734.0
DYD3_k127_6565975_20 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.00000000000000000000000000000000000002414 153.0
DYD3_k127_6565975_21 Helix-turn-helix domain - - - 0.000000000000000000000000000000000001168 156.0
DYD3_k127_6565975_22 NUDIX domain - - - 0.000000000000000000000000000000000001984 150.0
DYD3_k127_6565975_23 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.000000000000000000000000000000001627 136.0
DYD3_k127_6565975_24 Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC) - - - 0.0000000000000000000001047 109.0
DYD3_k127_6565975_25 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.00000000000000007 87.0
DYD3_k127_6565975_26 - - - - 0.00000000002206 73.0
DYD3_k127_6565975_27 - - - - 0.00000003427 54.0
DYD3_k127_6565975_28 - - - - 0.000004537 50.0
DYD3_k127_6565975_3 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 1.332e-210 664.0
DYD3_k127_6565975_4 Beta-eliminating lyase K00639 - 2.3.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 552.0
DYD3_k127_6565975_5 Belongs to the RtcB family K14415 - 6.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 514.0
DYD3_k127_6565975_6 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008924 427.0
DYD3_k127_6565975_7 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 430.0
DYD3_k127_6565975_8 Zinc-binding dehydrogenase K00060 - 1.1.1.103 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 393.0
DYD3_k127_6565975_9 Sodium/hydrogen exchanger family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006534 348.0
DYD3_k127_6570297_0 CarboxypepD_reg-like domain - - - 0.0 1264.0
DYD3_k127_6570297_1 Insulinase (Peptidase family M16) K07263 - - 2.011e-263 843.0
DYD3_k127_6570297_10 - - - - 0.0000000000000000000000000000000000000000000000000000000003923 215.0
DYD3_k127_6570297_11 Nicotinamide mononucleotide transporter K03811 - - 0.000000000000000000000000000000000000000000000000000002814 201.0
DYD3_k127_6570297_12 tRNA wobble adenosine to inosine editing - - - 0.000000000000000000000000000000000000000000000005551 185.0
DYD3_k127_6570297_13 - - - - 0.000000000000000000000000000000000008344 144.0
DYD3_k127_6570297_14 Phosphoglycerate mutase family - - - 0.00000000000000000000000000000003446 138.0
DYD3_k127_6570297_2 Peptidase dimerisation domain K12941 - - 2.35e-218 691.0
DYD3_k127_6570297_3 Amidohydrolase family - - - 4.624e-214 676.0
DYD3_k127_6570297_4 Pfam:SusD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008094 586.0
DYD3_k127_6570297_5 Polyphosphate kinase 2 (PPK2) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008558 383.0
DYD3_k127_6570297_6 peptidase activity K01266 - 3.4.11.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001964 387.0
DYD3_k127_6570297_7 Domain of unknown function (DUF4397) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003144 256.0
DYD3_k127_6570297_8 NmrA-like family - - - 0.000000000000000000000000000000000000000000000000000000000000001692 229.0
DYD3_k127_6570297_9 - - - - 0.0000000000000000000000000000000000000000000000000000000000018 224.0
DYD3_k127_6629428_0 oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor K00311 GO:0003674,GO:0003824,GO:0004174,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016645,GO:0016649,GO:0016722,GO:0017133,GO:0019866,GO:0022900,GO:0022904,GO:0031090,GO:0031224,GO:0031300,GO:0031301,GO:0031304,GO:0031305,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0032592,GO:0032991,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043783,GO:0044237,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045251,GO:0045333,GO:0048037,GO:0048038,GO:0048039,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0070013,GO:0098573,GO:0098798,GO:1902494,GO:1990204 1.5.5.1 3.573e-204 649.0
DYD3_k127_6629428_1 Electron transfer flavoprotein domain K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 370.0
DYD3_k127_6629428_2 Electron transfer flavoprotein domain K03521 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006215 277.0
DYD3_k127_6629428_3 Acyl-CoA dehydrogenase, C-terminal domain K00252 - 1.3.8.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006243 269.0
DYD3_k127_6656271_0 Fumarate reductase flavoprotein C-term K00239 - 1.3.5.1,1.3.5.4 0.0 1058.0
DYD3_k127_6656271_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 1.01e-201 635.0
DYD3_k127_6656271_10 4Fe-4S ferredoxin iron-sulfur binding domain protein K00240 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000193 368.0
DYD3_k127_6656271_11 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003258 319.0
DYD3_k127_6656271_12 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006682 317.0
DYD3_k127_6656271_13 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009217 289.0
DYD3_k127_6656271_14 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000005946 253.0
DYD3_k127_6656271_15 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000006523 243.0
DYD3_k127_6656271_16 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000001101 227.0
DYD3_k127_6656271_17 fumarate reductase) cytochrome b subunit K00241 - - 0.00000000000000000000000000000000000000000000000000000001312 205.0
DYD3_k127_6656271_18 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.00000000000000000000000000000000000000000000001989 175.0
DYD3_k127_6656271_19 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K05788 - - 0.000000000000000000000000000000000000000000001057 168.0
DYD3_k127_6656271_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 616.0
DYD3_k127_6656271_20 LVIVD repeat - - - 0.000000000000000000000000000000000000000006115 172.0
DYD3_k127_6656271_21 Phosphoglycerate kinase K00927 - 2.7.2.3 0.0000000000000000000000000000000000000000446 154.0
DYD3_k127_6656271_22 Molybdopterin converting factor subunit K03635,K21142 - 2.8.1.12 0.00000000000000000000000000000001389 132.0
DYD3_k127_6656271_23 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.0000000000000000000000000002019 125.0
DYD3_k127_6656271_24 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.000000000000000000000001139 113.0
DYD3_k127_6656271_25 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0050136,GO:0055114,GO:0098796,GO:1902494 1.6.5.3 0.0000000000000000005947 91.0
DYD3_k127_6656271_26 Preprotein translocase SecG subunit K03075 - - 0.0000000001746 66.0
DYD3_k127_6656271_27 molybdopterin converting factor K03635,K21142 - 2.8.1.12 0.00000375 55.0
DYD3_k127_6656271_3 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein K00341 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002328 569.0
DYD3_k127_6656271_4 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region K00336 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003952 542.0
DYD3_k127_6656271_5 NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002927 526.0
DYD3_k127_6656271_6 Carbamoyl-phosphate synthase small chain, CPSase domain K01956 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007876 471.0
DYD3_k127_6656271_7 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001587 464.0
DYD3_k127_6656271_8 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004417 432.0
DYD3_k127_6656271_9 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 393.0
DYD3_k127_6679463_0 Atp-dependent helicase - - - 1.431e-233 733.0
DYD3_k127_6679463_1 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 427.0
DYD3_k127_6679463_2 Thioredoxin - - - 0.000000000000000000000000000000001802 137.0
DYD3_k127_6679463_3 Pterin 4 alpha carbinolamine dehydratase K01724 - 4.2.1.96 0.0000000000000000000000000000002693 126.0
DYD3_k127_6679463_4 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.0000000000000000000000000000005353 138.0
DYD3_k127_6679463_5 COG0720 6-pyruvoyl-tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000004727 122.0
DYD3_k127_6679463_6 Rdx family K07401 - - 0.00000001854 57.0
DYD3_k127_6700977_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 3.658e-202 646.0
DYD3_k127_6700977_1 tRNA synthetases class II (D, K and N) K01893 - 6.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008832 595.0
DYD3_k127_6700977_10 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009546 428.0
DYD3_k127_6700977_11 response to abiotic stimulus K03086,K06867 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003763 419.0
DYD3_k127_6700977_12 Phosphoenolpyruvate hydrolase-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007234 404.0
DYD3_k127_6700977_13 Fructose-1-6-bisphosphatase, N-terminal domain K03841 - 3.1.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009321 409.0
DYD3_k127_6700977_14 imidazolonepropionase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 353.0
DYD3_k127_6700977_15 pfkB family carbohydrate kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 347.0
DYD3_k127_6700977_16 AIR synthase related protein, C-terminal domain K01933 - 6.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000663 342.0
DYD3_k127_6700977_17 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 333.0
DYD3_k127_6700977_18 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003238 324.0
DYD3_k127_6700977_19 Competence protein K02238 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007249 324.0
DYD3_k127_6700977_2 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 572.0
DYD3_k127_6700977_20 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008835 276.0
DYD3_k127_6700977_21 Domain of unknown function (DU1801) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002874 250.0
DYD3_k127_6700977_22 Activator of Hsp90 ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007516 250.0
DYD3_k127_6700977_23 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000001209 254.0
DYD3_k127_6700977_24 MazG nucleotide pyrophosphohydrolase domain K02428 - 3.6.1.66 0.00000000000000000000000000000000000000000000000000000000000000000002509 240.0
DYD3_k127_6700977_25 Domain of unknown function (DU1801) - - - 0.000000000000000000000000000000000000000000000000000000000101 208.0
DYD3_k127_6700977_26 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000000000000000000000000055 192.0
DYD3_k127_6700977_27 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000000000000002849 184.0
DYD3_k127_6700977_28 Serine hydrolase (FSH1) - - - 0.0000000000000000000000000000000000000000000000001995 188.0
DYD3_k127_6700977_29 YCII-related domain - - - 0.00000000000000000000000000000000000000000000009753 172.0
DYD3_k127_6700977_3 Sigma-70 region 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002984 546.0
DYD3_k127_6700977_30 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000003231 163.0
DYD3_k127_6700977_31 Enoyl-CoA hydratase carnithine racemase K15866 - 5.3.3.18 0.0000000000000000000000000000000000000000005139 177.0
DYD3_k127_6700977_32 This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis K01489 - 3.5.4.5 0.000000000000000000000000000000000002062 141.0
DYD3_k127_6700977_33 Winged helix DNA-binding domain - - - 0.00000000000000000000000000000000001982 139.0
DYD3_k127_6700977_34 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.00000000000000000000000000001387 125.0
DYD3_k127_6700977_35 - - - - 0.00000000000000000000000009803 124.0
DYD3_k127_6700977_36 - - - - 0.0000000000000000000000004628 115.0
DYD3_k127_6700977_37 YCII-related domain - - - 0.000000000000000000001214 101.0
DYD3_k127_6700977_38 MarR family - - - 0.00000000000000000001321 98.0
DYD3_k127_6700977_39 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 GO:0000287,GO:0003674,GO:0005488,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0019752,GO:0034641,GO:0042558,GO:0043167,GO:0043169,GO:0043436,GO:0043603,GO:0044237,GO:0044281,GO:0046483,GO:0046653,GO:0046872,GO:0051186,GO:0071704,GO:1901360,GO:1901564 2.1.2.2 0.0000000000000000001106 99.0
DYD3_k127_6700977_4 Catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001855 512.0
DYD3_k127_6700977_40 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate - - - 0.0000000000000007999 82.0
DYD3_k127_6700977_41 Regulatory protein, FmdB family - - - 0.00000000000001548 82.0
DYD3_k127_6700977_42 Late competence development protein ComFB K02241 - - 0.00000000003517 74.0
DYD3_k127_6700977_43 - - - - 0.00000002568 66.0
DYD3_k127_6700977_44 positive regulation of growth - GO:0008150,GO:0040008,GO:0045927,GO:0048518,GO:0050789,GO:0065007 - 0.0000008939 57.0
DYD3_k127_6700977_45 Domain of unknown function (DUF1844) - - - 0.000005115 60.0
DYD3_k127_6700977_5 Uncharacterised protein family (UPF0261) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 479.0
DYD3_k127_6700977_6 Phosphotransfer between the C1 and C5 carbon atoms of pentose K01839 - 5.4.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008821 461.0
DYD3_k127_6700977_7 hydrogenase expression formation protein HypE K04655 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002471 449.0
DYD3_k127_6700977_8 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003468 458.0
DYD3_k127_6700977_9 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007697 459.0
DYD3_k127_6710291_0 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 - 5.4.99.13 0.0 1668.0
DYD3_k127_6710291_1 Carboxyl transferase domain - - - 5.397e-231 731.0
DYD3_k127_6710291_10 Ribonuclease E/G family K08300,K08301 - 3.1.26.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 400.0
DYD3_k127_6710291_11 RecQ zinc-binding K03654 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008949 357.0
DYD3_k127_6710291_12 Putative neutral zinc metallopeptidase K07054 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003352 344.0
DYD3_k127_6710291_13 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002558 323.0
DYD3_k127_6710291_14 Subtilase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002393 300.0
DYD3_k127_6710291_15 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes - - - 0.000000000000000000000000000000000000000000000000000000000000000009637 251.0
DYD3_k127_6710291_16 B12 binding domain K01849 - 5.4.99.2 0.000000000000000000000000000000000000000000000000000000000007668 227.0
DYD3_k127_6710291_17 translation release factor activity K03265 GO:0001666,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006950,GO:0008150,GO:0009628,GO:0016020,GO:0030312,GO:0036293,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0070482,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000002228 225.0
DYD3_k127_6710291_18 serine-type endopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000004055 218.0
DYD3_k127_6710291_19 Low temperature requirement protein A - - - 0.0000000000000000000000000000000000000000000000009069 189.0
DYD3_k127_6710291_2 Dehydrogenase K02030,K17760,K19713 - 1.1.9.1,1.8.2.2 9.943e-208 676.0
DYD3_k127_6710291_20 protein conserved in cyanobacteria - - - 0.00000000000000000000000000000000000000000002075 176.0
DYD3_k127_6710291_21 Putative restriction endonuclease - - - 0.0000000000000000000000000000000000000000003684 167.0
DYD3_k127_6710291_22 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000002252 139.0
DYD3_k127_6710291_23 - - - - 0.000000000000000000000000000000000005826 156.0
DYD3_k127_6710291_24 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000003259 133.0
DYD3_k127_6710291_25 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.00000000000000000000000000000692 122.0
DYD3_k127_6710291_26 Belongs to the enoyl-CoA hydratase isomerase family K13766 - 4.2.1.18 0.0000000000000000000000000002374 128.0
DYD3_k127_6710291_27 Domain of unknown function (DUF4112) - - - 0.00000000000000000000000004447 113.0
DYD3_k127_6710291_28 N,N-dimethylaniline monooxygenase activity - - - 0.000000000000000001298 88.0
DYD3_k127_6710291_29 Disulphide bond corrector protein DsbC K04084 - 1.8.1.8 0.000000000000002624 82.0
DYD3_k127_6710291_3 Acyclic terpene utilisation family protein AtuA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 633.0
DYD3_k127_6710291_30 Serine aminopeptidase, S33 - - - 0.000000001409 69.0
DYD3_k127_6710291_31 - - - - 0.0007654 48.0
DYD3_k127_6710291_4 Acyl-CoA dehydrogenase, C-terminal domain K18244 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 576.0
DYD3_k127_6710291_5 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004867 559.0
DYD3_k127_6710291_6 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006795 548.0
DYD3_k127_6710291_7 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000615 547.0
DYD3_k127_6710291_8 PFAM sulfatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001548 449.0
DYD3_k127_6710291_9 PFAM FMN-dependent alpha-hydroxy acid dehydrogenase K00101,K00467,K16422 - 1.1.2.3,1.1.3.46,1.13.12.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004817 431.0
DYD3_k127_6729885_0 domain, Protein - - - 1.014e-290 907.0
DYD3_k127_6729885_1 hydrolase activity, hydrolyzing O-glycosyl compounds K01176 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 3.2.1.1 4.309e-200 637.0
DYD3_k127_6729885_10 Appr-1'-p processing enzyme - - - 0.000000000000000000000000000000000000000000000000000000002579 205.0
DYD3_k127_6729885_11 Protein of unknown function (DUF1697) - - - 0.0000000000000000000000000000000000000000000000000005991 189.0
DYD3_k127_6729885_12 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000001738 205.0
DYD3_k127_6729885_13 Amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000001094 177.0
DYD3_k127_6729885_14 Haem-binding uptake, Tiki superfamily, ChaN - - - 0.00000000000000000000000000000000000000000008884 171.0
DYD3_k127_6729885_15 Belongs to the UPF0145 family - - - 0.00000000000000000000000000000000000005352 149.0
DYD3_k127_6729885_16 Protein of unknown function (DUF1569) - - - 0.0000000000000000000000000000000000006853 145.0
DYD3_k127_6729885_17 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.000000000000000000000000000005319 121.0
DYD3_k127_6729885_18 - - - - 0.00000000000000000001517 94.0
DYD3_k127_6729885_19 Divergent 4Fe-4S mono-cluster - - - 0.000000000000000000831 90.0
DYD3_k127_6729885_2 4-alpha-glucanotransferase K00705 - 2.4.1.25 6.142e-198 630.0
DYD3_k127_6729885_3 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006378 577.0
DYD3_k127_6729885_4 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005325 532.0
DYD3_k127_6729885_5 COG1680 Beta-lactamase class C and other penicillin binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 445.0
DYD3_k127_6729885_6 cAMP biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001144 307.0
DYD3_k127_6729885_7 peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001681 246.0
DYD3_k127_6729885_8 DinB family - - - 0.00000000000000000000000000000000000000000000000000000000121 205.0
DYD3_k127_6729885_9 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000001455 227.0
DYD3_k127_6740484_0 inositol 2-dehydrogenase activity - - - 2.839e-207 667.0
DYD3_k127_6740484_1 ATP-grasp - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002802 295.0
DYD3_k127_6740484_10 Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC - - - 0.0000000000000004795 92.0
DYD3_k127_6740484_2 transferase activity, transferring glycosyl groups K00786 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000168 285.0
DYD3_k127_6740484_4 Membrane protein involved in the export of O-antigen and teichoic acid - - - 0.00000000000000000000000000000000000000000000000000000000003917 224.0
DYD3_k127_6740484_5 Bacterial Ig-like domain 2 - - - 0.000000000000000000000000000000000000000002929 180.0
DYD3_k127_6740484_6 Glycosyl transferase family 21 - - - 0.000000000000000000000000000000000000000008562 170.0
DYD3_k127_6740484_7 COG2977 Phosphopantetheinyl transferase component of siderophore synthetase - - - 0.000000000000000000000000000000000002347 145.0
DYD3_k127_6740484_8 O-Antigen ligase - - - 0.0000000000000000000000002194 121.0
DYD3_k127_6740484_9 PFAM Polysaccharide deacetylase - - - 0.0000000000000000005281 98.0
DYD3_k127_6749413_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001545 571.0
DYD3_k127_6749413_1 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000000000004188 222.0
DYD3_k127_6749413_2 Forkhead associated domain - - - 0.000000000007244 78.0
DYD3_k127_6749413_3 Glycosyl hydrolase family 3 N terminal domain K05349 - 3.2.1.21 0.00001226 51.0
DYD3_k127_6750378_0 Belongs to the HpcH HpaI aldolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001539 509.0
DYD3_k127_6750378_1 Amidohydrolase family K01466 - 3.5.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003257 485.0
DYD3_k127_6750378_10 PFAM blue (type 1) copper domain protein - - - 0.0000000000002686 81.0
DYD3_k127_6750378_2 Belongs to the allantoicase family K01477 GO:0003674,GO:0003824,GO:0004037,GO:0006139,GO:0006144,GO:0006145,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009112,GO:0009987,GO:0016787,GO:0016810,GO:0016813,GO:0019439,GO:0034641,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0046113,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575 3.5.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009326 408.0
DYD3_k127_6750378_3 Catalyzes the oxidation of uric acid to 5- hydroxyisourate, which is further processed to form (S)-allantoin K00365 - 1.7.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000003423 275.0
DYD3_k127_6750378_4 membrane - - - 0.00000000000000000000000000000000000000000000001795 178.0
DYD3_k127_6750378_5 allantoin biosynthetic process K01477,K16840 - 3.5.3.4,4.1.1.97 0.000000000000000000000000000000000000000002847 171.0
DYD3_k127_6750378_6 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000000000000000000000002294 162.0
DYD3_k127_6750378_7 - - - - 0.00000000000000000000000000000000001634 147.0
DYD3_k127_6750378_8 Transthyretin K07127 - 3.5.2.17 0.000000000000000000000000000000003233 132.0
DYD3_k127_6750378_9 PFAM glycosyl transferase family 9 - - - 0.000000000000000000000000105 109.0
DYD3_k127_6753719_0 homoserine kinase activity K00823,K07250 - 2.6.1.19,2.6.1.22 8.185e-296 945.0
DYD3_k127_6753719_1 Sodium:solute symporter family - - - 5.772e-255 796.0
DYD3_k127_6753719_2 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001548 242.0
DYD3_k127_6753719_3 Domain of unknown function (DUF4403) - - - 0.0000000000000000000000000000000000000000000000000000000000000003971 238.0
DYD3_k127_6753719_4 Belongs to the TPP enzyme family - - - 0.000000000000000000000000000000000000000000000000000000000000001576 228.0
DYD3_k127_6753719_5 - - - - 0.0000000000000000000559 101.0
DYD3_k127_682426_0 Sortilin, neurotensin receptor 3, - - - 0.0 1325.0
DYD3_k127_682426_1 Carboxypeptidase regulatory-like domain - - - 9.219e-318 1013.0
DYD3_k127_682426_10 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008574 436.0
DYD3_k127_682426_11 FMN-dependent dehydrogenase K00101,K16422 - 1.1.2.3,1.1.3.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 404.0
DYD3_k127_682426_12 Zinc-binding dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002175 379.0
DYD3_k127_682426_13 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006463 329.0
DYD3_k127_682426_14 3-hydroxyacyl-CoA dehydrogenase domain protein K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001664 325.0
DYD3_k127_682426_15 PFAM metal-dependent phosphohydrolase, HD sub domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003003 327.0
DYD3_k127_682426_16 PFAM Band 7 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004809 300.0
DYD3_k127_682426_17 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000008081 282.0
DYD3_k127_682426_18 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 GO:0003674,GO:0003824,GO:0006091,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009055,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0018130,GO:0019438,GO:0022900,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0052693,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.17.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000005253 251.0
DYD3_k127_682426_19 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001022 259.0
DYD3_k127_682426_2 glutamine synthetase K01915 - 6.3.1.2 9.549e-268 843.0
DYD3_k127_682426_20 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000223 243.0
DYD3_k127_682426_21 Atp-dependent helicase - - - 0.0000000000000000000000000000000000000000000000000000000000000004111 231.0
DYD3_k127_682426_22 COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS CutS homologs K07302 - 1.3.99.16 0.000000000000000000000000000000000000000000000000000000000000008568 220.0
DYD3_k127_682426_23 Conserved TM helix - - - 0.0000000000000000000000000000000000000000000000000000000317 205.0
DYD3_k127_682426_24 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000001482 204.0
DYD3_k127_682426_25 Major facilitator superfamily MFS_1 - - - 0.000000000000000000000000000000000000000000000000003314 206.0
DYD3_k127_682426_26 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.0000000000000000000000000000000000000000000000003683 181.0
DYD3_k127_682426_27 Tetratricopeptide repeat K08309 - - 0.000000000000000000000000000000000000001251 169.0
DYD3_k127_682426_28 negative regulation of transcription, DNA-templated - - - 0.00000000000000000000000000000406 124.0
DYD3_k127_682426_29 Metal-sensitive transcriptional repressor K21600 - - 0.000000000000000000000000000008112 123.0
DYD3_k127_682426_3 Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding K07303 - 1.3.99.16 7.201e-255 807.0
DYD3_k127_682426_30 - - - - 0.000000000000000000000000001581 123.0
DYD3_k127_682426_31 - - - - 0.0000000000000000000000001502 114.0
DYD3_k127_682426_32 Transglycosylase associated protein - - - 0.0000000000000000000000002252 107.0
DYD3_k127_682426_33 Belongs to the NiCoT transporter (TC 2.A.52) family K07241 - - 0.000000000000000000000001918 120.0
DYD3_k127_682426_34 Protein of unknown function DUF116 K09729 - - 0.00000000000000000000699 108.0
DYD3_k127_682426_35 - - - - 0.00000000000000008191 88.0
DYD3_k127_682426_36 Heavy-metal-associated domain K07213 - - 0.00000000005386 65.0
DYD3_k127_682426_37 Bacterial transcriptional activator domain - - - 0.00000004603 66.0
DYD3_k127_682426_38 - - - - 0.00000006877 57.0
DYD3_k127_682426_4 heavy metal translocating P-type ATPase K17686 - 3.6.3.54 4.454e-223 717.0
DYD3_k127_682426_40 ZU5 domain - - - 0.0001007 52.0
DYD3_k127_682426_5 PFAM TonB-dependent Receptor K16091 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 532.0
DYD3_k127_682426_6 Belongs to the deoxyhypusine synthase family K00809 - 2.5.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 491.0
DYD3_k127_682426_7 TonB dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002682 479.0
DYD3_k127_682426_8 NADH dehydrogenase, FAD-containing subunit K03885 - 1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004155 458.0
DYD3_k127_682426_9 Thiolase, C-terminal domain K00626,K07508 - 2.3.1.16,2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004618 446.0
DYD3_k127_6843156_0 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.0000000000000000000000000000000000000000000000000000000000000003357 224.0
DYD3_k127_6843156_1 Roadblock/LC7 domain - - - 0.00000000000000000000000000000000000000000000002873 178.0
DYD3_k127_6843156_2 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.00000000002823 68.0
DYD3_k127_6843156_3 - - - - 0.00000002188 61.0
DYD3_k127_6843156_4 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.000002282 55.0
DYD3_k127_6882676_0 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 - 2.1.1.74 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003023 574.0
DYD3_k127_6882676_1 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 486.0
DYD3_k127_6882676_10 - - - - 0.000000000000001269 83.0
DYD3_k127_6882676_11 - - - - 0.0007723 51.0
DYD3_k127_6882676_2 Type IV pilus assembly protein PilM; K02662 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004705 438.0
DYD3_k127_6882676_3 AMIN domain K02666 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 437.0
DYD3_k127_6882676_4 Phage integrase, N-terminal SAM-like domain K03733 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009896 306.0
DYD3_k127_6882676_5 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.000000000000000000000000000000000000000000000000000000000000000000000000006707 255.0
DYD3_k127_6882676_6 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 0.00000000000000000000000000000000000000000000000000000000000005004 218.0
DYD3_k127_6882676_7 Fimbrial assembly protein (PilN) - - - 0.000000000000000000000000000000005515 136.0
DYD3_k127_6882676_8 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.00000000000000000000001614 111.0
DYD3_k127_6882676_9 Pilus assembly protein, PilO K02664 - - 0.000000000000000004053 92.0
DYD3_k127_6883733_0 COG0433 Predicted ATPase K06915 - - 6.429e-253 805.0
DYD3_k127_6883733_1 Calcineurin-like phosphoesterase superfamily domain K03547 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002701 368.0
DYD3_k127_6883733_2 Thymidine kinase K00857 - 2.7.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000001364 269.0
DYD3_k127_6883733_3 aminotransferase class I and II K00812 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000002369 276.0
DYD3_k127_6883733_4 AAA domain K03546 - - 0.000000000000000000000000000000000000000000000000000000002988 213.0
DYD3_k127_6883733_5 COGs COG2380 conserved - - - 0.0000000000000000000000000000000000002499 153.0
DYD3_k127_6883733_6 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.0000000000000000000000004058 108.0
DYD3_k127_6883733_7 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.0000000000000000000002249 101.0
DYD3_k127_6883733_9 DEAD-box RNA helicase involved in K05592 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003725,GO:0003727,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006401,GO:0006417,GO:0006725,GO:0006807,GO:0006950,GO:0006996,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009056,GO:0009057,GO:0009266,GO:0009314,GO:0009409,GO:0009628,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009987,GO:0010468,GO:0010501,GO:0010556,GO:0010557,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0019439,GO:0022607,GO:0022613,GO:0022618,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031330,GO:0032268,GO:0032270,GO:0033554,GO:0033592,GO:0034248,GO:0034250,GO:0034622,GO:0034641,GO:0034655,GO:0042254,GO:0042255,GO:0042273,GO:0042623,GO:0043170,GO:0043487,GO:0043488,GO:0043489,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0045727,GO:0045934,GO:0046483,GO:0046700,GO:0048255,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051716,GO:0060255,GO:0061013,GO:0065003,GO:0065007,GO:0065008,GO:0070035,GO:0070417,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097617,GO:0140098,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1902369,GO:1902373,GO:1903311,GO:1903312,GO:2000112 3.6.4.13 0.000001979 60.0
DYD3_k127_6894000_0 WD40-like Beta Propeller Repeat K03641 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009126 265.0
DYD3_k127_6894000_1 involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000001697 249.0
DYD3_k127_6894000_2 MotA/TolQ/ExbB proton channel family K03562 - - 0.00000000000000000000000000000000000000000000000000000000002477 213.0
DYD3_k127_6894000_3 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.0000000000000000000000000000000000000000000000007738 198.0
DYD3_k127_6894000_4 Biopolymer transport protein ExbD/TolR K03559,K03560 - - 0.00000000000000000000000000000000004004 138.0
DYD3_k127_6894000_5 Outer membrane lipoprotein - - - 0.00000000000000000000000000000000008992 145.0
DYD3_k127_6894000_6 Belongs to the ompA family K03640 - - 0.00000000000000000000000000001582 124.0
DYD3_k127_6894000_7 TonB C terminal K03832 - - 0.000000000000000000000003633 110.0
DYD3_k127_6898529_0 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005135 343.0
DYD3_k127_6898529_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008257 290.0
DYD3_k127_6898529_2 protocatechuate 3,4-dioxygenase activity K00449 - 1.13.11.3 0.000000000000000000000000000000000000000000000000000000005776 206.0
DYD3_k127_6898529_3 lipid kinase activity - - - 0.00000000000000000000000000000000000000000000000265 186.0
DYD3_k127_6898529_4 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000005987 159.0
DYD3_k127_6898529_5 YceI-like domain - - - 0.00000000000000000000000006309 115.0
DYD3_k127_6898529_6 - - - - 0.000000000000000000000001017 115.0
DYD3_k127_6898529_7 Transcriptional regulator K07729 - - 0.00000000000000000000009808 108.0
DYD3_k127_6898529_8 SnoaL-like domain - - - 0.000000000000000001456 93.0
DYD3_k127_6898529_9 - - - - 0.0001721 50.0
DYD3_k127_6919343_0 BlaR1 peptidase M56 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001929 254.0
DYD3_k127_6919343_1 PFAM Penicillinase repressor - - - 0.000000000000000000000000000000000001525 143.0
DYD3_k127_6919343_2 Translation initiation factor SUI1 K03113 - - 0.00000000000000000000002322 106.0
DYD3_k127_6992406_2 bacterial-type flagellum organization K02411 - - 0.000002657 52.0
DYD3_k127_7011222_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source K01916 - 6.3.1.5 3.439e-206 658.0
DYD3_k127_7011222_1 Domain of unknown function (DUF4010) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 377.0
DYD3_k127_7011222_10 Putative phosphatase (DUF442) - - - 0.00000000000002137 82.0
DYD3_k127_7011222_11 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.00000000000003565 83.0
DYD3_k127_7011222_12 Virulence factor Mce family protein K02067 - - 0.00000000005797 73.0
DYD3_k127_7011222_2 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA K00784 - 3.1.26.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 371.0
DYD3_k127_7011222_3 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008551 293.0
DYD3_k127_7011222_4 belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000305 281.0
DYD3_k127_7011222_5 ABC transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000005024 246.0
DYD3_k127_7011222_6 FES K03575 - - 0.000000000000000000000000000000000000000000000000000000000000000593 230.0
DYD3_k127_7011222_7 Permease MlaE K02066 - - 0.000000000000000000000000000000000000000000000000000009013 206.0
DYD3_k127_7011222_8 Thioesterase superfamily - - - 0.00000000000000000000000000001002 125.0
DYD3_k127_7011222_9 Uncharacterized conserved protein (DUF2203) - - - 0.0000000000000000000002039 103.0
DYD3_k127_7037412_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 1.883e-225 737.0
DYD3_k127_7037412_1 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006002 306.0
DYD3_k127_7037412_2 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000001369 145.0
DYD3_k127_7037412_3 Peptidase family M23 - - - 0.0000000000000000000000000000002112 135.0
DYD3_k127_7037412_4 bacterial-type flagellum-dependent cell motility K01317 - 3.4.21.10 0.000000000000000000000001349 120.0
DYD3_k127_7068260_0 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001275 509.0
DYD3_k127_7068260_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002084 445.0
DYD3_k127_7068260_10 hydrolase of the alpha beta-hydrolase fold K07020 - - 0.000000000000000000000000000000000000000000000000000000000000000002631 235.0
DYD3_k127_7068260_11 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.00000000000000000000000000000000000000000000000000000000000002835 229.0
DYD3_k127_7068260_12 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0000000000000000000000000000000000000000000000000000000001998 209.0
DYD3_k127_7068260_13 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.0000000000000000000000000000000000000000000000000006759 196.0
DYD3_k127_7068260_14 EXOIII K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000004877 192.0
DYD3_k127_7068260_15 Conserved hypothetical protein 95 K08316 - 2.1.1.171 0.00000000000000000000000000000000000000000000004086 179.0
DYD3_k127_7068260_16 Met-10+ like-protein K02687 - - 0.000000000000000000000000000000000000000000004851 177.0
DYD3_k127_7068260_17 PFAM Endoribonuclease L-PSP - - - 0.0000000000000000000000000000000000000000541 157.0
DYD3_k127_7068260_18 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.00000000000000000000000000000000000002702 146.0
DYD3_k127_7068260_19 PFAM Histidine triad (HIT) protein K02503 - - 0.000000000000000000000000000000000001098 141.0
DYD3_k127_7068260_2 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002565 383.0
DYD3_k127_7068260_20 STAS domain K04749 - - 0.000000000000000000000000000002172 127.0
DYD3_k127_7068260_21 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000000000841 115.0
DYD3_k127_7068260_22 Ribosomal protein S21 K02970 - - 0.00000000000000000000001073 101.0
DYD3_k127_7068260_23 COG2172 Anti-sigma regulatory factor (Ser Thr protein kinase) K04757 - 2.7.11.1 0.0000000000000000000003931 101.0
DYD3_k127_7068260_24 Zn-ribbon protein possibly nucleic acid-binding K07164 - - 0.00000000000000239 85.0
DYD3_k127_7068260_25 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000007919 71.0
DYD3_k127_7068260_3 DHH family K07462 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005406 402.0
DYD3_k127_7068260_4 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002339 359.0
DYD3_k127_7068260_5 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002974 324.0
DYD3_k127_7068260_6 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005987 314.0
DYD3_k127_7068260_7 Phosphate acetyl/butaryl transferase K00625 - 2.3.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005436 286.0
DYD3_k127_7068260_8 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001761 250.0
DYD3_k127_7068260_9 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.00000000000000000000000000000000000000000000000000000000000000000003674 238.0
DYD3_k127_7072371_0 heme-copper terminal oxidase activity K02274 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000415 629.0
DYD3_k127_7072371_1 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002339 347.0
DYD3_k127_7072371_2 Methyl-viologen-reducing hydrogenase, delta subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000202 276.0
DYD3_k127_7072371_3 cytochrome c oxidase (Subunit II) K02275 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000004492 197.0
DYD3_k127_7072371_4 WD40-like Beta Propeller Repeat - - - 0.000000000000000000002602 109.0
DYD3_k127_7072371_5 Electron transport protein SCO1 SenC K07152 - - 0.0000000003393 72.0
DYD3_k127_7072371_6 - - - - 0.00002134 54.0
DYD3_k127_7103513_0 - - - - 9.345e-285 888.0
DYD3_k127_7103513_1 PFAM NADH flavin oxidoreductase NADH oxidase K00219,K09461 - 1.14.13.40,1.3.1.34 9.084e-275 878.0
DYD3_k127_7103513_10 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006306 281.0
DYD3_k127_7103513_11 Domain of unknown function (DUF305) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005809 249.0
DYD3_k127_7103513_12 COGs COG1680 Beta-lactamase class C and other penicillin binding protein - - - 0.00000000000000000000000000000000000000000000000000000001183 218.0
DYD3_k127_7103513_13 Alpha beta hydrolase K00433 - 1.11.1.10 0.000000000000000000000000000000000000000000000001886 187.0
DYD3_k127_7103513_14 negative regulation of transcription, DNA-templated - - - 0.0000000000000000000000000000000000006916 143.0
DYD3_k127_7103513_15 Endoribonuclease L-PSP K09022 - 3.5.99.10 0.000000000000000000000000000002533 139.0
DYD3_k127_7103513_16 GYD domain - - - 0.0000000000000000000000000002434 118.0
DYD3_k127_7103513_17 protein kinase activity - - - 0.00000000000000000000002859 100.0
DYD3_k127_7103513_18 Toxic component of a toxin-antitoxin (TA) module. An RNase K19686 - - 0.000000000000003755 78.0
DYD3_k127_7103513_19 OmpA family - - - 0.000001397 56.0
DYD3_k127_7103513_2 COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases K08295 - 6.2.1.32 6.261e-205 667.0
DYD3_k127_7103513_3 Bacterial transcriptional activator domain - - - 6.253e-194 640.0
DYD3_k127_7103513_4 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002151 554.0
DYD3_k127_7103513_5 COG1228 Imidazolonepropionase and related amidohydrolases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009548 471.0
DYD3_k127_7103513_6 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004621 460.0
DYD3_k127_7103513_7 Enoyl-CoA hydratase/isomerase K15866 - 5.3.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004455 376.0
DYD3_k127_7103513_8 nuclease activity K02335 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 364.0
DYD3_k127_7103513_9 cytochrome c peroxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007275 297.0
DYD3_k127_7117929_0 - - - - 0.00000000004281 75.0
DYD3_k127_7117929_1 DNA-binding helix-turn-helix protein - - - 0.00009384 47.0
DYD3_k127_7142562_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 2019.0
DYD3_k127_7142562_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 1.553e-224 699.0
DYD3_k127_7142562_2 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.00000000000000001983 82.0
DYD3_k127_7145452_0 Radical SAM superfamily K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006712 572.0
DYD3_k127_7145452_1 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002934 273.0
DYD3_k127_7145452_2 HpcH/HpaI aldolase/citrate lyase family - - - 0.0000000000000000000000000000000000000000000000000000000000000001091 231.0
DYD3_k127_7145452_3 Belongs to the MEMO1 family K06990 - - 0.000000000000000000000000000000000000000000000000000000009422 208.0
DYD3_k127_7145452_4 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 - 2.7.1.167,2.7.7.70 0.00000000000000000000000000000000000000000183 163.0
DYD3_k127_7145452_5 Ham1 family K02428 - 3.6.1.66 0.00000000000000000000000000000000000000003303 165.0
DYD3_k127_7145452_6 Lipopolysaccharide-assembly - - - 0.0000000000000000000000000000000000005004 147.0
DYD3_k127_7145452_7 - - - - 0.000000001795 67.0
DYD3_k127_717824_0 Nucleotidyl transferase K00971 - 2.7.7.13 0.00000000000000000000000000000000000000000000000000000000000000000000003012 248.0
DYD3_k127_717824_1 Sugar nucleotidyl transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000004872 243.0
DYD3_k127_717824_2 PFAM beta-lactamase domain protein - - - 0.000000000000000000000000000000000000000000000001692 190.0
DYD3_k127_717824_3 - - - - 0.000000000000000000000000008395 112.0
DYD3_k127_718006_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 4.805e-299 944.0
DYD3_k127_718006_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 2.409e-256 803.0
DYD3_k127_718006_10 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002843 471.0
DYD3_k127_718006_11 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 475.0
DYD3_k127_718006_12 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001765 430.0
DYD3_k127_718006_13 aminopeptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 385.0
DYD3_k127_718006_14 Sugar (and other) transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006336 379.0
DYD3_k127_718006_15 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008248 375.0
DYD3_k127_718006_16 Drug exporters of the RND superfamily K06994,K07003,K20466,K20470 GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006869,GO:0008150,GO:0009273,GO:0009987,GO:0010876,GO:0015920,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0033036,GO:0040007,GO:0042546,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0071554,GO:0071702,GO:0071766,GO:0071840,GO:0071944,GO:1901264 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003025 379.0
DYD3_k127_718006_17 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001458 369.0
DYD3_k127_718006_18 Esterase of the alpha-beta hydrolase superfamily K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 374.0
DYD3_k127_718006_19 3'-5' exonuclease K03684 - 3.1.13.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002035 360.0
DYD3_k127_718006_2 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 8.499e-226 738.0
DYD3_k127_718006_20 Zn-dependent protease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002351 348.0
DYD3_k127_718006_21 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005326 338.0
DYD3_k127_718006_22 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005586 335.0
DYD3_k127_718006_23 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001164 327.0
DYD3_k127_718006_24 Amino acid permease K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003391 331.0
DYD3_k127_718006_25 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate K00761 - 2.4.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 310.0
DYD3_k127_718006_26 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008454 283.0
DYD3_k127_718006_27 Serine/threonine phosphatases, family 2C, catalytic domain K01090,K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000002288 272.0
DYD3_k127_718006_28 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003178 272.0
DYD3_k127_718006_29 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001394 264.0
DYD3_k127_718006_3 WD40-like Beta Propeller Repeat - - - 1.056e-206 679.0
DYD3_k127_718006_30 TonB dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001853 275.0
DYD3_k127_718006_31 - - - - 0.00000000000000000000000000000000000000000000000000000000000000001848 242.0
DYD3_k127_718006_32 hydrolase activity, acting on ester bonds - - - 0.00000000000000000000000000000000000000000000000000000000000004147 228.0
DYD3_k127_718006_33 deoxyhypusine monooxygenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000111 233.0
DYD3_k127_718006_34 Cys/Met metabolism PLP-dependent enzyme - - - 0.000000000000000000000000000000000000000000000000000000000005306 223.0
DYD3_k127_718006_35 Sigma-70 region 2 K03088 - - 0.000000000000000000000000000000000000000000000000000001346 196.0
DYD3_k127_718006_36 DinB superfamily - - - 0.000000000000000000000000000000000000000000000000000003776 198.0
DYD3_k127_718006_37 Haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000000000000000000000002909 196.0
DYD3_k127_718006_38 NUDIX domain K01515 - 3.6.1.13 0.000000000000000000000000000000000000000000000000001707 188.0
DYD3_k127_718006_39 Helix-turn-helix domain - - - 0.00000000000000000000000000000000000000000000000004668 189.0
DYD3_k127_718006_4 Bacterial protein of unknown function (DUF885) - - - 7.129e-194 622.0
DYD3_k127_718006_40 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.0000000000000000000000000000000000000000000000002923 183.0
DYD3_k127_718006_41 Domain of unknown function (DUF4974) K07165 - - 0.000000000000000000000000000000000000000000000001428 187.0
DYD3_k127_718006_42 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000005816 185.0
DYD3_k127_718006_43 HEAT repeats - - - 0.00000000000000000000000000000000000000000001158 183.0
DYD3_k127_718006_44 efflux transmembrane transporter activity K02004 - - 0.00000000000000000000000000000000000000000002007 178.0
DYD3_k127_718006_45 DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.000000000000000000000000000000000000000003821 168.0
DYD3_k127_718006_46 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000003873 156.0
DYD3_k127_718006_47 ECF sigma factor K03088 - - 0.00000000000000000000000000000000000002637 150.0
DYD3_k127_718006_48 Endonuclease Exonuclease Phosphatase - - - 0.00000000000000000000000000000000000005164 156.0
DYD3_k127_718006_49 DUF218 domain - - - 0.000000000000000000000000000000000005158 152.0
DYD3_k127_718006_5 Domain in cystathionine beta-synthase and other proteins. K01697 - 4.2.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 593.0
DYD3_k127_718006_50 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.00000000000000000000000000000000001692 147.0
DYD3_k127_718006_51 solute sodium symporter, small subunit - - - 0.00000000000000000000000000000157 124.0
DYD3_k127_718006_52 SWIB/MDM2 domain K03169 - 5.99.1.2 0.00000000000000000000000000002123 121.0
DYD3_k127_718006_53 metal-sulfur cluster biosynthetic - - - 0.000000000000000000000000004452 113.0
DYD3_k127_718006_54 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000000000000003535 113.0
DYD3_k127_718006_55 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000000000000000003756 119.0
DYD3_k127_718006_56 Matrixin - - - 0.00000000000000000001017 105.0
DYD3_k127_718006_58 energy transducer activity K03832 - - 0.0000000000000000003418 97.0
DYD3_k127_718006_59 Thioesterase K07107,K12500 - - 0.000000000000000001525 98.0
DYD3_k127_718006_6 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007065 554.0
DYD3_k127_718006_60 Prolyl oligopeptidase family - - - 0.000000000000000006246 99.0
DYD3_k127_718006_61 Ribosomal protein L34 K02914 - - 0.0000000000000000121 83.0
DYD3_k127_718006_62 - - - - 0.0000000000000003476 93.0
DYD3_k127_718006_63 Alpha beta hydrolase K01066 - - 0.00000000000006993 79.0
DYD3_k127_718006_64 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.0000000000002967 76.0
DYD3_k127_718006_65 multi-organism process K03195 - - 0.00000000001396 73.0
DYD3_k127_718006_66 Membrane - - - 0.00000000007863 73.0
DYD3_k127_718006_67 SMART zinc finger CDGSH-type domain protein - - - 0.0000000007311 63.0
DYD3_k127_718006_68 Rhomboid family - - - 0.0000023 59.0
DYD3_k127_718006_69 Sel1-like repeats. K07126 - - 0.000002974 56.0
DYD3_k127_718006_7 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006 540.0
DYD3_k127_718006_70 Essential cell division protein that activates septal peptidoglycan synthesis and constriction of the cell. Acts on both sides of the membrane, via interaction with FtsA in the cytoplasm and interaction with the FtsQBL complex in the periplasm. These interactions may induce a conformational switch in both FtsA and FtsQBL, leading to septal peptidoglycan synthesis by FtsI and associated synthases K03591 GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0007049,GO:0008150,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0022402,GO:0022607,GO:0030428,GO:0031224,GO:0031226,GO:0032506,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0051301,GO:0061640,GO:0071840,GO:0071944,GO:0090529,GO:1902410,GO:1903047 - 0.0001685 54.0
DYD3_k127_718006_71 transcriptional activator domain - - - 0.0002249 55.0
DYD3_k127_718006_72 - - - - 0.0006436 46.0
DYD3_k127_718006_8 lysine biosynthetic process via aminoadipic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001283 550.0
DYD3_k127_718006_9 Beta-Casp domain K07576 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005173 484.0
DYD3_k127_7196558_0 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002023 478.0
DYD3_k127_7196558_1 Putative serine dehydratase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002993 301.0
DYD3_k127_7196558_2 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002736 288.0
DYD3_k127_7196558_3 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000001036 220.0
DYD3_k127_7215791_0 Aldehyde dehydrogenase family K22187 - - 2.962e-248 773.0
DYD3_k127_7215791_1 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003691 602.0
DYD3_k127_7215791_10 Domain of unknown function (DUF4105) - - - 0.0000000000000000000000000000000000000000000000000000000000000000001406 250.0
DYD3_k127_7215791_11 helix_turn_helix, cAMP Regulatory protein K10914 - - 0.000000000000000000000000000000000000000000000000000000000003155 216.0
DYD3_k127_7215791_12 tail specific protease K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000002421 225.0
DYD3_k127_7215791_13 Allophanate hydrolase subunit 2 K06350 - - 0.000000000000000000000000000000000000000000000000000000001947 216.0
DYD3_k127_7215791_14 Stage II sporulation protein K06381 - - 0.0000000000000000000000000000000000000000000000000000008984 208.0
DYD3_k127_7215791_15 Allophanate hydrolase, subunit 1 - - - 0.000000000000000000000000000000000000000000000000000001485 213.0
DYD3_k127_7215791_16 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000154 203.0
DYD3_k127_7215791_17 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.00000000000000000000000000000000000000000000000000002265 201.0
DYD3_k127_7215791_18 Methyltransferase small domain K02493 - 2.1.1.297 0.00000000000000000000000000000000000000000000000000003184 198.0
DYD3_k127_7215791_19 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.000000000000000000000000000000000000001003 163.0
DYD3_k127_7215791_2 Required for chromosome condensation and partitioning K03529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 518.0
DYD3_k127_7215791_20 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.00000000000000000000000000000000106 136.0
DYD3_k127_7215791_21 PFAM Class I peptide chain release factor K15034 - - 0.00000000000000000000000000000001069 134.0
DYD3_k127_7215791_22 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.00000000000000000000000005007 121.0
DYD3_k127_7215791_23 Outer membrane lipoprotein carrier protein LolA K03634 - - 0.000000000000000000000006346 109.0
DYD3_k127_7215791_24 50S ribosomal protein L31 K02909 - - 0.00000000000000000000006497 104.0
DYD3_k127_7215791_25 - - - - 0.000000000000000001303 94.0
DYD3_k127_7215791_26 Control of competence regulator ComK, YlbF/YmcA - - - 0.000000000000000004013 94.0
DYD3_k127_7215791_27 Curli production assembly/transport component CsgG - - - 0.000001273 60.0
DYD3_k127_7215791_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003968 436.0
DYD3_k127_7215791_4 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004864 421.0
DYD3_k127_7215791_5 Peptidase inhibitor I9 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003743 417.0
DYD3_k127_7215791_6 Homoserine dehydrogenase, NAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002129 323.0
DYD3_k127_7215791_7 NeuB family K03856 - 2.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002571 319.0
DYD3_k127_7215791_8 Belongs to the UPF0271 (lamB) family K07160 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001131 285.0
DYD3_k127_7215791_9 tRNA processing K06864 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002833 266.0
DYD3_k127_7227166_0 Dihydroorotate dehydrogenase K17723 GO:0003674,GO:0003824,GO:0003954,GO:0006139,GO:0006206,GO:0006208,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009112,GO:0009987,GO:0016491,GO:0016651,GO:0034641,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0046113,GO:0046483,GO:0046700,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072529,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575 1.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001685 285.0
DYD3_k127_7227166_1 - - - - 0.0005687 47.0
DYD3_k127_7372_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 GO:0000287,GO:0001666,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0007154,GO:0008150,GO:0008152,GO:0008976,GO:0009267,GO:0009405,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0015968,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019538,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0036211,GO:0036293,GO:0040007,GO:0042594,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044419,GO:0044464,GO:0046777,GO:0046872,GO:0050896,GO:0051704,GO:0051716,GO:0070482,GO:0071496,GO:0071704,GO:0071944,GO:1901564 2.7.4.1 5.047e-223 716.0
DYD3_k127_7372_1 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003886 461.0
DYD3_k127_7372_2 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001854 404.0
DYD3_k127_7372_3 Aminotransferase class-V K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 398.0
DYD3_k127_7372_4 ADP-ribosylation factor family K06883 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005676 380.0
DYD3_k127_7372_5 Competence-damaged protein K03742 - 3.5.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002397 376.0
DYD3_k127_7372_6 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.00000000000000000000000000000000000000000139 164.0
DYD3_k127_7372_7 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.00000000000000000000000000001245 125.0
DYD3_k127_7372_8 Roadblock/LC7 domain - - - 0.00000000000000008817 81.0
DYD3_k127_751679_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 5.205e-296 919.0
DYD3_k127_751679_1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005983 280.0
DYD3_k127_751679_2 NmrA-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004414 258.0
DYD3_k127_751679_3 COG2801 Transposase and inactivated derivatives - - - 0.000000000000000000000000000000000000000000000000000000000000000000151 239.0
DYD3_k127_751679_4 - - - - 0.0000000000000000000000000000000000000000000000008364 181.0
DYD3_k127_751679_5 Transposase (IS116 IS110 IS902 family) - - - 0.000000000000000000000000000000000000001497 154.0
DYD3_k127_751679_7 Transposase (IS116 IS110 IS902 family) - - - 0.00000035 63.0
DYD3_k127_781362_0 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001426 418.0
DYD3_k127_781362_1 peptidyl-lysine modification to peptidyl-hypusine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 357.0
DYD3_k127_781362_2 ADP-heptose-LPS heptosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009081 270.0
DYD3_k127_781362_3 FAD dependent oxidoreductase K00285,K03153 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016491,GO:0016638,GO:0016641,GO:0017144,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0036094,GO:0042364,GO:0042723,GO:0042724,GO:0043167,GO:0043168,GO:0043436,GO:0043799,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071704,GO:0071949,GO:0072527,GO:0072528,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.4.3.19,1.4.5.1 0.000000000000000000000000000000000000000000000000000001052 205.0
DYD3_k127_781362_4 Glycosyl transferase family 2 K08301 - - 0.000000000000000000000000000000000000000000000000000007056 198.0
DYD3_k127_781362_5 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000000000000000000006467 204.0
DYD3_k127_781362_6 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161,K11381 - 1.2.4.1,1.2.4.4 0.0000000000000000000000000000000000000000000000000001009 200.0
DYD3_k127_781362_7 Protein of unknown function (DUF3108) - - - 0.000000000000000000000000000000000000000000009697 176.0
DYD3_k127_781362_8 N-terminal domain of galactosyltransferase - - - 0.00000000000000000000000000000000000000000001916 173.0
DYD3_k127_781362_9 Protein of unknown function (DUF1684) K09164 - - 0.00000000000000000003077 101.0
DYD3_k127_80692_0 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998 - 0.0000000000000000000000000000000000000000001446 172.0
DYD3_k127_80692_1 Amidohydrolase family - - - 0.000000000000000000000000000000357 136.0
DYD3_k127_80692_2 Carboxypeptidase regulatory-like domain - - - 0.000000000000004778 85.0
DYD3_k127_80692_3 DDE superfamily endonuclease - - - 0.0000008227 55.0
DYD3_k127_80692_4 TonB dependent receptor - - - 0.000131 49.0
DYD3_k127_80692_5 - - - - 0.0004116 53.0
DYD3_k127_830658_0 Di-haem oxidoreductase, putative peroxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008739 376.0
DYD3_k127_830658_1 unfolded protein binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002728 302.0
DYD3_k127_830658_2 Helix-turn-helix diphteria tox regulatory element K03709 - - 0.000000000000000000000000000000000000000000000000000000000000000004229 237.0
DYD3_k127_830658_3 Heavy metal translocating P-type atpase K01534 - 3.6.3.3,3.6.3.5 0.000000000000000000000000000000000000000000000000000000000000009594 223.0
DYD3_k127_830658_4 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000000000000000000000000000000000000001498 211.0
DYD3_k127_830658_5 MacB-like periplasmic core domain K02004 - - 0.000000000000000001135 99.0
DYD3_k127_830658_6 Rieske [2Fe-2S] domain K16937 - 1.8.5.2 0.0000000000007408 75.0
DYD3_k127_830658_7 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.0005809 42.0
DYD3_k127_833072_0 Sodium:solute symporter family K14392 - - 1.5e-200 636.0
DYD3_k127_833072_1 isocitrate dehydrogenase activity K00031 GO:0003674,GO:0003824,GO:0003862,GO:0004448,GO:0004450,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006091,GO:0006520,GO:0006551,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0022900,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0050896,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.42 3.025e-200 632.0
DYD3_k127_833072_10 Sigma-70 region 2 K03088 - - 0.00000000000000000000000000000000000000000000523 174.0
DYD3_k127_833072_11 MaoC like domain K17865 - 4.2.1.55 0.00000000000000000000000000000000000000001146 164.0
DYD3_k127_833072_12 DoxX K15977 - - 0.0000000000000000000000000000000000000009757 154.0
DYD3_k127_833072_13 - - - - 0.0000000000000000000000000000000281 133.0
DYD3_k127_833072_14 Sigma-70 region 2 K03088 - - 0.000000000000000000000000000001021 130.0
DYD3_k127_833072_16 - - - - 0.00000000000000000000000001469 117.0
DYD3_k127_833072_17 Putative adhesin - - - 0.0000000000000000001035 102.0
DYD3_k127_833072_18 Autotransporter beta-domain - - - 0.000000000000000002481 93.0
DYD3_k127_833072_19 pathogenesis K15125,K21449 - - 0.000000000001646 79.0
DYD3_k127_833072_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001308 606.0
DYD3_k127_833072_21 PFAM Copper resistance protein CopC K07156 - - 0.0000000002953 68.0
DYD3_k127_833072_22 PFAM Amidohydrolase 2 K03392,K07045 - 4.1.1.45 0.0000002051 59.0
DYD3_k127_833072_23 Cytochrome C oxidase assembly K02862 - - 0.000000309 55.0
DYD3_k127_833072_24 Copper resistance protein D K07245 - - 0.000002352 59.0
DYD3_k127_833072_25 - - - - 0.00006611 54.0
DYD3_k127_833072_3 Aminotransferase class I and II K00812 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006282 492.0
DYD3_k127_833072_4 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001798 493.0
DYD3_k127_833072_5 PFAM Rhodanese domain protein K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002949 428.0
DYD3_k127_833072_6 COG0454 Histone acetyltransferase HPA2 and related - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001715 362.0
DYD3_k127_833072_7 VWA domain containing CoxE-like protein K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005677 353.0
DYD3_k127_833072_8 -O-antigen - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007263 268.0
DYD3_k127_833072_9 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase - - - 0.000000000000000000000000000000000000000000000004185 191.0
DYD3_k127_932211_0 aconitate hydratase K01681 - 4.2.1.3 0.0 1191.0
DYD3_k127_932211_1 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 2.929e-298 923.0
DYD3_k127_932211_10 Belongs to the metallo-dependent hydrolases superfamily. HutI family K01468 - 3.5.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009059 523.0
DYD3_k127_932211_11 GlcNAc-PI de-N-acetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 482.0
DYD3_k127_932211_12 Belongs to the agmatine deiminase family K10536 - 3.5.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001964 453.0
DYD3_k127_932211_13 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K12251 - 3.5.1.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009297 417.0
DYD3_k127_932211_14 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00324 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001876 423.0
DYD3_k127_932211_15 Belongs to the glycosyl hydrolase 57 family K03406,K16149 GO:0000271,GO:0003674,GO:0003824,GO:0003844,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0055114,GO:0071704,GO:1901576 2.4.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003374 412.0
DYD3_k127_932211_16 Sugar (and other) transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001751 362.0
DYD3_k127_932211_17 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000932 322.0
DYD3_k127_932211_18 GHMP kinases C terminal K00872 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004413,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006555,GO:0006566,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009088,GO:0009092,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009605,GO:0009607,GO:0009617,GO:0009620,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019202,GO:0019752,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0050896,GO:0051704,GO:0051707,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.1.39 0.000000000000000000000000000000000000000000000000000000000724 216.0
DYD3_k127_932211_19 COG3288 NAD NADP transhydrogenase alpha subunit K00324 - 1.6.1.2 0.00000000000000000000000000001646 121.0
DYD3_k127_932211_2 Carbohydrate phosphorylase K00688 - 2.4.1.1 5.492e-295 920.0
DYD3_k127_932211_20 Redoxin - - - 0.000000000000000000000006737 104.0
DYD3_k127_932211_21 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.00000000000000000000003807 105.0
DYD3_k127_932211_22 Protein of unknown function (DUF971) K03593 - - 0.0000000000000000000001198 101.0
DYD3_k127_932211_3 ABC transporter - - - 5.954e-246 770.0
DYD3_k127_932211_4 Peptidase family M3 K08602 - - 3.104e-208 683.0
DYD3_k127_932211_5 Amidase K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 604.0
DYD3_k127_932211_6 Peptidase M14, carboxypeptidase A - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003817 569.0
DYD3_k127_932211_7 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 531.0
DYD3_k127_932211_8 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 520.0
DYD3_k127_932211_9 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 518.0
DYD3_k127_932878_0 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000385 285.0
DYD3_k127_932878_1 Diguanylate cyclase with PAS PAC and GAF sensors - - - 0.0000000000000000000000000000000000003801 147.0
DYD3_k127_932878_2 Ribonuclease B OB domain K03704 - - 0.000000000000000000000000001232 116.0
DYD3_k127_960075_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0001130,GO:0001131,GO:0001141,GO:0001217,GO:0002161,GO:0002196,GO:0003674,GO:0003700,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006355,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006450,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009451,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016070,GO:0016597,GO:0016787,GO:0016788,GO:0016874,GO:0016875,GO:0019219,GO:0019222,GO:0019538,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0042802,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0046483,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0052689,GO:0060255,GO:0065007,GO:0065008,GO:0071704,GO:0080090,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:0140110,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 6.1.1.7 2.154e-227 734.0
DYD3_k127_960075_1 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000449 603.0
DYD3_k127_960075_10 protein tyrosine phosphatase activity K01104 - 3.1.3.48 0.0000000000000000000000000000000000000000000000000003454 198.0
DYD3_k127_960075_11 Uncharacterised protein family UPF0102 K07460 - - 0.0000000000000000000000000003631 123.0
DYD3_k127_960075_12 regulatory protein RecX K03565 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000543 74.0
DYD3_k127_960075_2 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 527.0
DYD3_k127_960075_3 Aminotransferase class I and II K00812 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002652 470.0
DYD3_k127_960075_4 MgsA AAA+ ATPase C terminal K07478 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000638 406.0
DYD3_k127_960075_5 Ftsk_gamma K03466 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 329.0
DYD3_k127_960075_6 Probable RNA and SrmB- binding site of polymerase A K00974 - 2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 315.0
DYD3_k127_960075_7 KR domain K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000003813 267.0
DYD3_k127_960075_8 transporter K07238,K11021,K16267 - - 0.000000000000000000000000000000000000000000000000000002106 205.0
DYD3_k127_960075_9 SIS domain K03271 - 5.3.1.28 0.0000000000000000000000000000000000000000000000000001932 199.0
DYD3_k127_973575_0 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000002792 229.0
DYD3_k127_973575_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0001986 52.0
DYD3_k127_981323_0 metallocarboxypeptidase activity K14054 - - 7.202e-299 939.0
DYD3_k127_981323_1 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 346.0
DYD3_k127_981323_2 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000007806 244.0
DYD3_k127_981323_3 Belongs to the peptidase M48B family K03799 - - 0.0000000000000000000000000000000000000000000000000000000000000496 228.0
DYD3_k127_981323_4 LemA family K03744 - - 0.000000000000000000000000000000000000000000000000000006192 196.0
DYD3_k127_981323_5 MerR HTH family regulatory protein - - - 0.00000000000000000000000000000009755 132.0
DYD3_k127_981323_6 COG4775 Outer membrane protein protective antigen OMA87 - - - 0.0000000000000000000000000000002426 141.0
DYD3_k127_981323_7 response to abiotic stimulus - - - 0.0000000000000000000000000009716 121.0
DYD3_k127_981323_8 - - - - 0.0000000000000000000241 103.0
DYD3_k127_981323_9 Transcriptional regulatory protein, C terminal - - - 0.000000000001969 79.0
DYD3_k127_998134_0 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001561 305.0
DYD3_k127_998134_1 Acyl transferase domain K00645 - 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 290.0
DYD3_k127_998134_2 NDK K00940 - 2.7.4.6 0.00000000000000000000000000000003394 126.0
DYD3_k127_998134_3 Uncharacterized ACR, COG1399 K07040 - - 0.0000000000000000000000000000633 121.0
DYD3_k127_998134_4 Ribosomal L32p protein family K02911 - - 0.0000000000000001426 81.0