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Overview

ID MAG00984
Name DYD3_bin.63
Sample SMP0027
Taxonomy
Kingdom Bacteria
Phylum Acidobacteriota
Class Vicinamibacteria
Order Fen-336
Family Fen-336
Genus DATFEN01
Species
Assembly information
Completeness (%) 78.17
Contamination (%) 1.89
GC content (%) 71.0
N50 (bp) 11,683
Genome size (bp) 3,891,383

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes3370

Gene name Description KEGG GOs EC E-value Score Sequence
DYD3_k127_1024227_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 5.863e-269 842.0
DYD3_k127_1024227_1 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 7.175e-203 637.0
DYD3_k127_1024227_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.0000000000000000000000000000000000000000000000000000000000000001864 223.0
DYD3_k127_1024227_3 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000005682 216.0
DYD3_k127_1024227_4 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000000005784 188.0
DYD3_k127_1024227_5 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.00000000005002 63.0
DYD3_k127_1030090_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 0.0 1349.0
DYD3_k127_1030090_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 9.746e-272 863.0
DYD3_k127_1030090_2 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001417 389.0
DYD3_k127_1030090_3 HlyD family secretion protein K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002725 324.0
DYD3_k127_1030090_4 cytochrome c nitrite reductase K15876 - - 0.0000000000000000000000000000000000000000000000000000000001313 208.0
DYD3_k127_1030090_5 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K03385 - 1.7.2.2 0.000000000000000000000000000000000000001859 157.0
DYD3_k127_1030090_6 - - - - 0.0000000000000000000000000000003258 127.0
DYD3_k127_1030090_7 helix_turn_helix multiple antibiotic resistance protein K15973 - - 0.0000000000001772 76.0
DYD3_k127_1063964_0 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007976 561.0
DYD3_k127_1063964_1 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008575 347.0
DYD3_k127_1063964_2 cAMP biosynthetic process K08282,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002765 304.0
DYD3_k127_1063964_3 Esterase of the alpha-beta hydrolase superfamily K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003844 249.0
DYD3_k127_1103198_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 1.754e-294 931.0
DYD3_k127_1103198_1 Heat shock 70 kDa protein K04043 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001654 391.0
DYD3_k127_1103198_2 PFAM peptidase S1 and S6, chymotrypsin Hap K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002302 363.0
DYD3_k127_1103198_3 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000000000000005007 185.0
DYD3_k127_1103198_4 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.0000000000000002712 84.0
DYD3_k127_1126552_0 NAD(P)-binding Rossmann-like domain - - - 7.373e-239 748.0
DYD3_k127_1126552_1 Aminotransferase class-III - - - 6.472e-200 631.0
DYD3_k127_1126552_10 PFAM PfkB domain protein - - - 0.0000000000000000000000000000000000000000000000008218 185.0
DYD3_k127_1126552_11 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767,K03768 - 5.2.1.8 0.0000000000000000000000000000000005349 139.0
DYD3_k127_1126552_12 Transcriptional regulatory protein, C terminal K02483 - - 0.00000000000000000000002171 109.0
DYD3_k127_1126552_13 Acetyltransferase (GNAT) domain K03790 - 2.3.1.128 0.00000000000004492 78.0
DYD3_k127_1126552_2 Glutamine amidotransferases class-II K00764 - 2.4.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 606.0
DYD3_k127_1126552_3 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004124 532.0
DYD3_k127_1126552_4 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'- nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases K00974 - 2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 361.0
DYD3_k127_1126552_5 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003061 357.0
DYD3_k127_1126552_6 CoA binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 362.0
DYD3_k127_1126552_7 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004698 326.0
DYD3_k127_1126552_8 amino acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001379 271.0
DYD3_k127_1126552_9 amino acid K20265 - - 0.0000000000000000000000000000000000000000000000000000000000000000002637 246.0
DYD3_k127_1155538_0 Rhodanese-related sulfurtransferase K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000005462 255.0
DYD3_k127_1155538_1 arylsulfatase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000002126 248.0
DYD3_k127_1155538_2 Ferredoxin - - - 0.000000000000000000000000008795 112.0
DYD3_k127_1155538_3 twin-arginine translocation pathway signal sequence domain protein - - - 0.000000001507 63.0
DYD3_k127_1155538_5 - K20326 - - 0.00012 54.0
DYD3_k127_1167350_0 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001892 522.0
DYD3_k127_1167350_1 chromate transport K07240 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008174 426.0
DYD3_k127_1167350_2 PFAM Integral membrane protein TerC K05794 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001814 397.0
DYD3_k127_1167350_3 Transcriptional regulator K03717 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000046 369.0
DYD3_k127_1167350_4 Chromate resistance exported protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001521 342.0
DYD3_k127_1167350_5 ornithine cyclodeaminase activity K01750,K18258,K19244 - 1.4.1.1,1.5.1.25,4.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 309.0
DYD3_k127_1167350_6 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000006069 144.0
DYD3_k127_1167350_7 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K01104,K03325,K03741,K03892,K18701 - 1.20.4.1,2.8.4.2,3.1.3.48 0.000000000000000000000000000004091 136.0
DYD3_k127_1167787_0 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002188 481.0
DYD3_k127_1167787_1 Belongs to the phosphoglycerate kinase family K00927 GO:0001871,GO:0002020,GO:0003674,GO:0003824,GO:0004618,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009893,GO:0009986,GO:0009987,GO:0010468,GO:0010604,GO:0010628,GO:0010755,GO:0010756,GO:0010954,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0017144,GO:0018130,GO:0019222,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0019899,GO:0030162,GO:0030193,GO:0030195,GO:0030246,GO:0030247,GO:0030312,GO:0031323,GO:0031325,GO:0032101,GO:0032102,GO:0032268,GO:0032270,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043532,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0045862,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048585,GO:0050789,GO:0050794,GO:0050818,GO:0050819,GO:0050878,GO:0051171,GO:0051173,GO:0051186,GO:0051188,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051917,GO:0051919,GO:0055086,GO:0060255,GO:0061041,GO:0061045,GO:0065007,GO:0065008,GO:0070613,GO:0071704,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0080134,GO:0090407,GO:1900046,GO:1900047,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1903034,GO:1903035,GO:1903317,GO:1903319,GO:2001065 2.7.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002119 450.0
DYD3_k127_1167787_2 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008846 434.0
DYD3_k127_1167787_3 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001842 308.0
DYD3_k127_1167787_4 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003433 284.0
DYD3_k127_1167787_5 GrpB protein - - - 0.0000000000000000000000000000000006117 137.0
DYD3_k127_1167787_6 PFAM Appr-1-p processing domain protein - - - 0.00000000000000000000000000000002226 143.0
DYD3_k127_1167787_7 Preprotein translocase SecG subunit K03075 - - 0.000000000000000006662 98.0
DYD3_k127_1190809_0 Acyl-CoA dehydrogenase, N-terminal domain - - - 9.582e-237 746.0
DYD3_k127_1190809_1 arylsulfatase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001521 362.0
DYD3_k127_1190809_2 protein conserved in bacteria - - - 0.0000000000000000000000000000000000003739 145.0
DYD3_k127_1197468_0 Belongs to the ClpA ClpB family K03696 - - 0.0 1071.0
DYD3_k127_1197468_1 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 513.0
DYD3_k127_1197468_2 MacB-like periplasmic core domain K09808 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004644 344.0
DYD3_k127_1197468_3 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005961 252.0
DYD3_k127_11980_0 radical SAM domain protein - - - 4.969e-204 646.0
DYD3_k127_11980_1 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007498 463.0
DYD3_k127_11980_2 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000001046 276.0
DYD3_k127_11980_3 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000001289 206.0
DYD3_k127_11980_4 Major facilitator superfamily K08161 - - 0.00000000000000000000000000000000000000000001574 181.0
DYD3_k127_11980_5 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000000000003086 137.0
DYD3_k127_11980_6 - - - - 0.00000000000000000002866 105.0
DYD3_k127_11980_7 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.00000000000006797 76.0
DYD3_k127_1228048_0 synthetase (ADP forming), alpha K01905,K09181,K22224 - 6.2.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005378 469.0
DYD3_k127_1228048_1 peroxiredoxin activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001081 253.0
DYD3_k127_1228048_2 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000002717 156.0
DYD3_k127_1228048_3 Disulphide bond corrector protein DsbC K04084 - 1.8.1.8 0.0000000000000000000000000000000007746 132.0
DYD3_k127_1228048_4 Patatin-like phospholipase K07001 - - 0.00000000000000000000000000001108 133.0
DYD3_k127_1228048_5 TIGRFAM hydrogenase (NiFe) small subunit (hydA) K06282,K18008 - 1.12.2.1,1.12.99.6 0.00000000000000000000004588 111.0
DYD3_k127_1228048_6 HD domain - - - 0.0000004265 61.0
DYD3_k127_125244_0 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 6.3e-201 651.0
DYD3_k127_125244_1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002318 295.0
DYD3_k127_125244_2 Bacterial regulatory protein, Fis family K02584 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004142 293.0
DYD3_k127_125244_3 Serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000001113 224.0
DYD3_k127_1300021_0 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004344 613.0
DYD3_k127_1300021_1 NADH dehydrogenase, FAD-containing subunit K03885 - 1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000135 567.0
DYD3_k127_1300021_2 Evidence 4 Homologs of previously reported genes of - - - 0.000000000000000000000000000000000000000000000000000000000000009029 233.0
DYD3_k127_1300021_3 ACT domain K09707 - - 0.000000000000000000000000000000005302 132.0
DYD3_k127_1300021_4 Peptidase family M28 - - - 0.00000004255 55.0
DYD3_k127_130683_0 Belongs to the arginase family K01480 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008216,GO:0008295,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0016787,GO:0016810,GO:0016813,GO:0034641,GO:0042401,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576 3.5.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002357 322.0
DYD3_k127_130683_1 TIGRFAM RarD protein, DMT superfamily transporter K05786 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004914 273.0
DYD3_k127_130683_2 Aminotransferase class I and II K00812 - 2.6.1.1 0.00000000000000000000000000000000000000000000001147 194.0
DYD3_k127_130683_3 Tetratricopeptide repeat - - - 0.00000000000001377 86.0
DYD3_k127_130683_4 Uncharacterized protein conserved in bacteria (DUF2252) - - - 0.000535 53.0
DYD3_k127_1310080_0 Flavin containing amine oxidoreductase - - - 3.073e-257 801.0
DYD3_k127_1310080_1 TIGRFAM phytoene desaturase K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003595 488.0
DYD3_k127_1310080_10 Type II secretion system (T2SS), protein E, N-terminal domain - - - 0.000000000000000000000000000000009271 140.0
DYD3_k127_1310080_11 - - - - 0.00000000000000000000000000000001101 132.0
DYD3_k127_1310080_12 Transcriptional regulatory protein, C terminal K07657 - - 0.000000000000000000000000000003022 126.0
DYD3_k127_1310080_13 - - - - 0.0000000000000000002169 103.0
DYD3_k127_1310080_14 - - - - 0.0000000000005073 83.0
DYD3_k127_1310080_15 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000001487 70.0
DYD3_k127_1310080_16 transcriptional regulator domain protein - - - 0.000000004833 64.0
DYD3_k127_1310080_17 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.0001473 55.0
DYD3_k127_1310080_2 peptidyl-lysine modification to peptidyl-hypusine K00809 - 2.5.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002037 475.0
DYD3_k127_1310080_3 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005163 317.0
DYD3_k127_1310080_4 Transmembrane secretion effector - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008551 263.0
DYD3_k127_1310080_5 Protein serine threonine phosphatase K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000007684 243.0
DYD3_k127_1310080_6 PFAM EAL domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000003756 259.0
DYD3_k127_1310080_7 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000001868 235.0
DYD3_k127_1310080_8 PFAM EAL domain - - - 0.000000000000000000000000000000000000000000000000001338 203.0
DYD3_k127_1312128_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 1.231e-291 915.0
DYD3_k127_1312128_1 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 1.309e-195 619.0
DYD3_k127_1312128_10 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000005453 173.0
DYD3_k127_1312128_11 AbgT putative transporter family K12942 - - 0.000000000000000000000000000000000000000000002299 171.0
DYD3_k127_1312128_12 Ribosomal protein L31 - - - 0.00000000000000000000000005581 110.0
DYD3_k127_1312128_13 serine-type peptidase activity K01990,K08884,K12132,K18912 - 1.14.99.50,2.7.11.1 0.0000000000000002959 87.0
DYD3_k127_1312128_14 Purple acid Phosphatase, N-terminal domain - - - 0.000000000001691 73.0
DYD3_k127_1312128_2 AbgT putative transporter family K12942 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005893 494.0
DYD3_k127_1312128_3 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006987 479.0
DYD3_k127_1312128_4 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 469.0
DYD3_k127_1312128_5 PFAM binding-protein-dependent transport systems inner membrane component K02054,K11071 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004189 399.0
DYD3_k127_1312128_6 Binding-protein-dependent transport system inner membrane component K02053 GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0009290,GO:0009292,GO:0009294,GO:0009987,GO:0015931,GO:0016020,GO:0044464,GO:0044764,GO:0050657,GO:0051027,GO:0051179,GO:0051234,GO:0051704,GO:0071702,GO:0071705,GO:0071944,GO:0098657 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006506 356.0
DYD3_k127_1312128_7 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.000000000000000000000000000000000000000000000000000000000002076 220.0
DYD3_k127_1312128_8 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02052,K11072 - 3.6.3.31 0.00000000000000000000000000000000000000000000000000000001687 202.0
DYD3_k127_1312128_9 spore germination K07790 - - 0.000000000000000000000000000000000000000000000000005454 195.0
DYD3_k127_1334590_0 MOFRL family K11529 - 2.7.1.165 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000372 350.0
DYD3_k127_1334590_1 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 336.0
DYD3_k127_1334590_2 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000009744 241.0
DYD3_k127_1334590_3 Polysaccharide biosynthesis protein K15856 - 1.1.1.281 0.00000000000000000000000000000000000000000000000000000000000000000001524 240.0
DYD3_k127_1334590_4 membrane - GO:0005575,GO:0016020 - 0.00000000000000000000000000005792 134.0
DYD3_k127_1334590_5 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.00000000000005262 82.0
DYD3_k127_1334590_7 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955,K00956 - 2.7.1.25,2.7.7.4 0.00000003183 56.0
DYD3_k127_1355168_0 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002606 501.0
DYD3_k127_1355168_1 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001845 387.0
DYD3_k127_1355168_2 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001928 383.0
DYD3_k127_1355168_3 Glycosyl hydrolase family 3 K05349 - 3.2.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003967 346.0
DYD3_k127_1355168_4 Polyprenyl synthetase K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001249 287.0
DYD3_k127_1355168_5 Ribosomal RNA methyltransferase RrmJ FtsJ K06442 - 2.1.1.226,2.1.1.227 0.0000000000000000000000000000000000000000000000000000000751 204.0
DYD3_k127_1355168_6 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.00000000001188 72.0
DYD3_k127_1364380_0 PFAM LmbE family protein K22136 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001747 592.0
DYD3_k127_1364380_1 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346,K14161 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002947 384.0
DYD3_k127_1364380_2 GTP binding K06883 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002094 275.0
DYD3_k127_1364380_3 Methyltransferase domain - - - 0.000000000000000000000000000000003676 138.0
DYD3_k127_1364380_4 Tetratricopeptide repeat - - - 0.0000001384 63.0
DYD3_k127_1368840_0 Tetratricopeptide repeat K12132 - 2.7.11.1 4.773e-194 636.0
DYD3_k127_1368840_1 Na+ dependent nucleoside transporter C-terminus K03317 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003168 366.0
DYD3_k127_1368840_2 Phosphorylase superfamily K00757 GO:0003674,GO:0003824,GO:0004850,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006218,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009116,GO:0009119,GO:0009164,GO:0009987,GO:0016043,GO:0016740,GO:0016757,GO:0016763,GO:0019439,GO:0022607,GO:0030955,GO:0031420,GO:0033554,GO:0034214,GO:0034641,GO:0034655,GO:0034656,GO:0042454,GO:0042802,GO:0043167,GO:0043169,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046108,GO:0046131,GO:0046133,GO:0046135,GO:0046483,GO:0046700,GO:0046872,GO:0050896,GO:0051259,GO:0051716,GO:0055086,GO:0065003,GO:0071704,GO:0071840,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901657,GO:1901658 2.4.2.3 0.0000000000000000000000000000000000000000000000000000000006167 225.0
DYD3_k127_1368840_3 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway K00852 - 2.7.1.15 0.0000001569 64.0
DYD3_k127_1432764_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003966 597.0
DYD3_k127_1432764_1 ABC transporter K01990,K09691 - - 0.000000000000000000000000000000000000000000000000000000000004468 216.0
DYD3_k127_1432764_2 Glycosyltransferase like family 2 K07011,K13659 - 2.4.1.264 0.00000000000000000000000000000000000000000000000000002776 205.0
DYD3_k127_1432764_3 PFAM glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000006343 171.0
DYD3_k127_1432764_4 PFAM ABC-2 type transporter K09690 - - 0.000000000000000000000000000000000002951 155.0
DYD3_k127_1432764_5 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway K00852 - 2.7.1.15 0.0000000000000000000000000000000002334 136.0
DYD3_k127_1432764_6 - - - - 0.0000000000000000000000000002651 133.0
DYD3_k127_1432764_7 - - - - 0.0000007219 55.0
DYD3_k127_1473243_0 Dehydrogenase E1 component K11381 - 1.2.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 531.0
DYD3_k127_1473243_1 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 442.0
DYD3_k127_1473243_2 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001422 288.0
DYD3_k127_1473243_3 Displays ATPase and GTPase activities K06958 - - 0.000000000000000000000000000000000000000000000000000000000000000002686 247.0
DYD3_k127_1473243_4 Mannose-6-phosphate isomerase - - - 0.000000000000000000000000000000000000000000001167 175.0
DYD3_k127_1473243_5 PTS system fructose IIA component K02793,K02794,K02821 - 2.7.1.191,2.7.1.194 0.0000000000000000000000000221 114.0
DYD3_k127_1473243_6 PTS HPr component phosphorylation site K11189 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000004617 98.0
DYD3_k127_1480919_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 1.176e-270 849.0
DYD3_k127_1480919_1 RuBisCO catalyzes two reactions the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site K01601 - 4.1.1.39 3.776e-269 836.0
DYD3_k127_1480919_10 Two component transcriptional regulator, LuxR family - - - 0.0000000000000000000000000000000000000000000000000003695 192.0
DYD3_k127_1480919_11 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000000000000000000000000000000002119 179.0
DYD3_k127_1480919_12 Predicted permease K07089 - - 0.00000000000000000000000000000000000000002455 156.0
DYD3_k127_1480919_13 Haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000002193 149.0
DYD3_k127_1480919_14 hydrolase - - - 0.00001271 50.0
DYD3_k127_1480919_2 uridine kinase K00855 - 2.7.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 494.0
DYD3_k127_1480919_3 PFAM AAA ATPase central domain protein K06413 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008321 407.0
DYD3_k127_1480919_4 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007568 403.0
DYD3_k127_1480919_5 Pyridine nucleotide-disulphide oxidoreductase K21567 GO:0008150,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0042221,GO:0050896,GO:0051716,GO:0070887,GO:0071241,GO:0071248,GO:0071281 1.18.1.2,1.19.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002155 324.0
DYD3_k127_1480919_6 Bacterial fructose-1,6-bisphosphatase, glpX-encoded K02446 - 3.1.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004035 293.0
DYD3_k127_1480919_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001965 276.0
DYD3_k127_1480919_8 ribulose-bisphosphate carboxylase activity K01602 - 4.1.1.39 0.000000000000000000000000000000000000000000000000000000000002086 211.0
DYD3_k127_1480919_9 PFAM ATP-binding region, ATPase domain protein - - - 0.0000000000000000000000000000000000000000000000000000002662 208.0
DYD3_k127_1481930_0 Glycoside hydrolase 97 K01187,K21574 - 3.2.1.20,3.2.1.3 4.823e-291 915.0
DYD3_k127_1481930_1 benzoyl-CoA reductase K04113 - 1.3.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005355 609.0
DYD3_k127_1481930_10 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000005631 245.0
DYD3_k127_1481930_11 Peptidase family M50 - - - 0.00000000000000000000000000000000000000000000000000000315 205.0
DYD3_k127_1481930_12 PFAM Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.00000000000000000000000000000000000000000005804 167.0
DYD3_k127_1481930_13 BadF/BadG/BcrA/BcrD ATPase family K04114 - 1.3.7.8 0.00000000000000000000000000000000000008859 150.0
DYD3_k127_1481930_14 Belongs to the bacterial histone-like protein family K03530 - - 0.000000000000000000000000000001144 124.0
DYD3_k127_1481930_15 HAF family - - - 0.00000000000000000000000000003494 132.0
DYD3_k127_1481930_16 Regulatory protein - - - 0.0000000000000000000000000001674 119.0
DYD3_k127_1481930_17 Acetyltransferase (GNAT) family - - - 0.000000000000000000000000001557 119.0
DYD3_k127_1481930_18 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.000000000000000000000002863 105.0
DYD3_k127_1481930_19 transposase activity K07483 - - 0.000000000002947 69.0
DYD3_k127_1481930_2 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009944 511.0
DYD3_k127_1481930_3 Alcohol dehydrogenase GroES-like domain K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006731 494.0
DYD3_k127_1481930_4 Enoyl-CoA hydratase/isomerase K07539 - 3.7.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002808 482.0
DYD3_k127_1481930_5 benzoyl-CoA reductase K04112 - 1.3.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001498 439.0
DYD3_k127_1481930_6 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07538 - 1.1.1.368 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 391.0
DYD3_k127_1481930_7 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 380.0
DYD3_k127_1481930_8 SMART Elongator protein 3 MiaB NifB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000173 264.0
DYD3_k127_1481930_9 Enoyl-CoA hydratase/isomerase K07537 - 4.2.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000001706 251.0
DYD3_k127_1496353_0 CorA-like Mg2+ transporter protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 412.0
DYD3_k127_1496353_1 Nucleotidyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000002943 234.0
DYD3_k127_1496353_2 efflux transmembrane transporter activity K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000002285 235.0
DYD3_k127_1496353_3 ADP-ribosylglycohydrolase - - - 0.00000000000000000000000000000000000000000000000000003488 199.0
DYD3_k127_1496353_4 Putative restriction endonuclease - - - 0.0000000000000000000000000000000001486 150.0
DYD3_k127_1496353_5 - - - - 0.00000000000000000000000000006498 120.0
DYD3_k127_1496353_6 nUDIX hydrolase - - - 0.00000000000000007989 91.0
DYD3_k127_1496353_7 regulation of response to stimulus - - - 0.000000000005095 78.0
DYD3_k127_1505333_0 Belongs to the PEP-utilizing enzyme family K01006,K22424 - 2.7.3.13,2.7.9.1 0.0 1064.0
DYD3_k127_1505333_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 430.0
DYD3_k127_1505333_10 Involved in DNA repair and RecF pathway recombination K03584 GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 - 0.00000000000000002167 93.0
DYD3_k127_1505333_11 Rhodanese Homology Domain - - - 0.000000000000003027 81.0
DYD3_k127_1505333_2 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000916 415.0
DYD3_k127_1505333_3 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004514 415.0
DYD3_k127_1505333_4 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001731 377.0
DYD3_k127_1505333_5 Mediates influx of magnesium ions K03284 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004047 261.0
DYD3_k127_1505333_6 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000149 255.0
DYD3_k127_1505333_7 Aminotransferase K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000001638 233.0
DYD3_k127_1505333_8 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.00000000000000000000000000271 117.0
DYD3_k127_1505333_9 DoxX - - - 0.00000000000000000003285 96.0
DYD3_k127_1512390_0 PFAM UbiA prenyltransferase K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005386 293.0
DYD3_k127_1512390_1 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.00000000000000000000000000000000000000000000000000000000000002523 226.0
DYD3_k127_1512390_2 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000101 203.0
DYD3_k127_1512390_3 S-acyltransferase activity K00658,K09699 - 2.3.1.168,2.3.1.61 0.00000000000000000000000000000000000008148 143.0
DYD3_k127_1512390_4 PFAM amidohydrolase K20810 - 3.5.4.40 0.00000000000000000000000000000000001586 142.0
DYD3_k127_1512390_5 phosphorelay sensor kinase activity K07638,K07673,K21009 - 2.7.13.3 0.00000000002975 76.0
DYD3_k127_1514986_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00174 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 513.0
DYD3_k127_1514986_1 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000138 451.0
DYD3_k127_1514986_10 Methionine biosynthesis protein MetW - - - 0.000000000000000000000000000000002063 139.0
DYD3_k127_1514986_2 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001593 448.0
DYD3_k127_1514986_3 PFAM aromatic amino acid beta-eliminating lyase threonine aldolase K01620 - 4.1.2.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008198 326.0
DYD3_k127_1514986_4 FAD dependent oxidoreductase K00111 - 1.1.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002246 315.0
DYD3_k127_1514986_5 Protein involved in biosynthesis of mitomycin antibiotics polyketide fumonisin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004644 299.0
DYD3_k127_1514986_6 Methionine biosynthesis protein MetW - - - 0.000000000000000000000000000000000000000000000000000000005657 210.0
DYD3_k127_1514986_7 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000001443 211.0
DYD3_k127_1514986_8 EamA-like transporter family - - - 0.0000000000000000000000000000000000000001363 162.0
DYD3_k127_1514986_9 Peptidase family S41 - - - 0.000000000000000000000000000000000003645 159.0
DYD3_k127_1529728_0 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 6.158e-284 882.0
DYD3_k127_1529728_1 Transketolase, pyrimidine binding domain K00162 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008212 413.0
DYD3_k127_1529728_2 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001911 368.0
DYD3_k127_1529728_3 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000098 283.0
DYD3_k127_1529728_4 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000000000000000000000000000000000000000000000000004442 217.0
DYD3_k127_1530378_0 Metallo-beta-lactamase superfamily K02238 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004078 325.0
DYD3_k127_1530378_1 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000003791 273.0
DYD3_k127_1530378_2 Domain of unknown function (DUF4388) - - - 0.000000000000000000000000000000000000000000000000000000000000000002266 242.0
DYD3_k127_1530378_3 KR domain K00059 - 1.1.1.100 0.00000000000000000000003533 105.0
DYD3_k127_1530378_4 Domain of unknown function (DUF1844) - - - 0.000000000000003467 81.0
DYD3_k127_1539432_0 Mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000056 263.0
DYD3_k127_1539432_1 major pilin protein fima - - - 0.0000000000000000000000000000000000000001209 160.0
DYD3_k127_1539432_2 Trypsin-like peptidase domain - - - 0.00000000000000000000000000000000000007417 155.0
DYD3_k127_1539432_3 glycolate biosynthetic process K01560 - 3.8.1.2 0.0000000000000000000000000000001127 139.0
DYD3_k127_1539432_4 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.000000000000000000008631 93.0
DYD3_k127_1539432_5 - - - - 0.00000004076 57.0
DYD3_k127_1544377_0 Belongs to the glycosyl hydrolase 57 family K16149 - 2.4.1.18 7.06e-203 644.0
DYD3_k127_1544377_1 Memo-like protein K06990 - - 0.00000000000000000000000000000000000000000000000000000000000002652 224.0
DYD3_k127_1544377_2 AMMECR1 K09141 - - 0.0000000000000000000000000000000000000000003655 164.0
DYD3_k127_1544377_3 - - - - 0.00000000000000000000000000000000002812 155.0
DYD3_k127_1544377_4 lysine biosynthetic process via aminoadipic acid - - - 0.0000000000000000000000000000001609 133.0
DYD3_k127_1544377_5 lyase activity - - - 0.000000000003524 75.0
DYD3_k127_1544377_6 Rho termination factor K09942 - - 0.000001378 59.0
DYD3_k127_1559269_0 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005858 515.0
DYD3_k127_1559269_1 CarboxypepD_reg-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002013 391.0
DYD3_k127_1559269_10 uridine kinase K00876 - 2.7.1.48 0.0000000001109 67.0
DYD3_k127_1559269_11 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.000005218 54.0
DYD3_k127_1559269_2 Domain of unknown function (DUF427) - - - 0.00000000000000000000000000000000000000000000000000000000000000005439 228.0
DYD3_k127_1559269_3 Transcriptional regulator K03717 - - 0.00000000000000000000000000000000000000000000000000000000000000006733 230.0
DYD3_k127_1559269_4 Mechanosensitive ion channel K16052 - - 0.0000000000000000000000000000000000000000000000000000001459 205.0
DYD3_k127_1559269_5 Belongs to the UPF0403 family - - - 0.0000000000000000000000000000000000000000009289 166.0
DYD3_k127_1559269_6 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000006921 149.0
DYD3_k127_1559269_7 peptidyl-tyrosine sulfation - - - 0.000000000000000000001596 109.0
DYD3_k127_1559269_8 DoxX K15977 - - 0.00000000000000000003706 96.0
DYD3_k127_1559269_9 peptidyl-tyrosine sulfation - - - 0.000000000000000002983 99.0
DYD3_k127_1560356_0 Enoyl-CoA hydratase/isomerase K15513 - 4.1.2.44 6.822e-224 706.0
DYD3_k127_1560356_1 benzoyl-CoA oxygenase K15512 - 1.14.13.208 1.519e-217 689.0
DYD3_k127_1560356_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000005435 244.0
DYD3_k127_1560356_3 - - - - 0.0000000000000000000000000000000000000000000000000000004003 213.0
DYD3_k127_1560356_4 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891,K15546 - 2.7.1.71 0.000000000000000000000000000000000000000000000000000008938 198.0
DYD3_k127_1560356_5 H( )-stimulated, divalent metal cation uptake system - - - 0.000000000000000000002649 99.0
DYD3_k127_1605386_0 cellulose binding - - - 0.0 1047.0
DYD3_k127_1605386_1 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity K00316 - 1.5.99.6 3.869e-216 683.0
DYD3_k127_1605386_2 Malic enzyme, NAD binding domain K00027 - 1.1.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002368 561.0
DYD3_k127_1605386_3 membrane - - - 0.00000000000000000000000000000000000000000000000000000003079 216.0
DYD3_k127_1605386_4 TonB dependent receptor K02014,K16087 - - 0.00000000000000000000000000000106 140.0
DYD3_k127_1605386_5 Putative phosphatase (DUF442) - - - 0.0000000000000000003279 94.0
DYD3_k127_1605386_6 Signal peptide protein - GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0006109,GO:0006110,GO:0006140,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009892,GO:0009894,GO:0009895,GO:0009987,GO:0010563,GO:0010675,GO:0010677,GO:0016020,GO:0016310,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0030312,GO:0030808,GO:0030809,GO:0030811,GO:0030812,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031329,GO:0031330,GO:0036211,GO:0042325,GO:0042326,GO:0042802,GO:0043170,GO:0043412,GO:0043457,GO:0043467,GO:0043470,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0045820,GO:0045912,GO:0045934,GO:0045936,GO:0045980,GO:0046777,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051174,GO:0051193,GO:0051195,GO:0051196,GO:0051198,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:1900371,GO:1900372,GO:1900542,GO:1900543,GO:1901564,GO:1903578,GO:1903579,GO:2001169,GO:2001170 - 0.000000000001613 80.0
DYD3_k127_1605386_7 - - - - 0.0000006826 62.0
DYD3_k127_1605386_8 sequence-specific DNA binding - - - 0.0005155 46.0
DYD3_k127_1607532_0 GTP-binding protein TypA K06207 - - 1.267e-271 861.0
DYD3_k127_1607532_1 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001652 434.0
DYD3_k127_1607532_2 Spermine/spermidine synthase domain K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 423.0
DYD3_k127_1607532_3 Tetratricopeptide repeat - - - 0.0000000000000000001832 103.0
DYD3_k127_1607532_4 PFAM Glycosyl transferases group 1 - - - 0.00000001022 68.0
DYD3_k127_1607532_5 O-linked N-acetylglucosamine transferase SPINDLY family - - - 0.000005975 57.0
DYD3_k127_1631580_0 Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB) K02549 - 4.2.1.113 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004076 383.0
DYD3_k127_1631580_1 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.00000000000000000000000000000000000004063 145.0
DYD3_k127_1631580_2 Belongs to the Fur family K03711 - - 0.000000000000000000000000000000000001069 144.0
DYD3_k127_1631580_3 Transcriptional regulator, AbiEi antitoxin, Type IV TA system - - - 0.0000000000000000000000000002832 127.0
DYD3_k127_1631580_4 Protein conserved in bacteria - - - 0.00000000000002316 85.0
DYD3_k127_1631580_5 Nucleotidyl transferase AbiEii toxin, Type IV TA system - - - 0.00001332 55.0
DYD3_k127_1645192_0 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain K01596,K01610 - 4.1.1.32,4.1.1.49 1.824e-279 869.0
DYD3_k127_1645192_1 protein kinase activity K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000374 338.0
DYD3_k127_1645192_2 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000000000000000000000000000003253 175.0
DYD3_k127_1645192_3 Protein of unknown function (DUF1015) - - - 0.0000000000000000000000000000000000000000002519 180.0
DYD3_k127_1645192_4 Domain of unknown function (DUF4388) - - - 0.00000000000000000000000000000001508 141.0
DYD3_k127_1645192_5 PFAM peptidase M28 - - - 0.000000000000000635 91.0
DYD3_k127_1645192_6 ABC-type multidrug transport system ATPase component - - - 0.000000000001309 79.0
DYD3_k127_1677356_0 Cytochrome C oxidase subunit II, periplasmic domain K00376 - 1.7.2.4 0.0 1037.0
DYD3_k127_1677356_1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K00266 - 1.4.1.13,1.4.1.14 1.479e-313 973.0
DYD3_k127_1677356_10 TIGRFAM methyltransferase cognate corrinoid proteins, Methanosarcina family K00548 - 2.1.1.13 0.0000000000000000000000000000000000000000000000003393 183.0
DYD3_k127_1677356_11 Trimethylamine methyltransferase (MTTB) - - - 0.0000000000000000000000000000000000000000000001338 184.0
DYD3_k127_1677356_12 COGs COG1622 Heme copper-type cytochrome quinol oxidase subunit 2 K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000893 182.0
DYD3_k127_1677356_13 PFAM Trimethylamine methyltransferase (MTTB) K14083 - 2.1.1.250 0.000000000000000000000000000000000000000000094 183.0
DYD3_k127_1677356_14 lipoprotein involved in nitrous oxide reduction K19342 - - 0.0000000000000000000000000000000000000000002152 170.0
DYD3_k127_1677356_15 COG2335 Secreted and surface protein containing fasciclin-like repeats - - - 0.000000000000000000000000000000000000001039 153.0
DYD3_k127_1677356_16 PFAM Formylglycine-generating sulfatase enzyme K18912 - 1.14.99.50 0.0000000000000000000000000003924 128.0
DYD3_k127_1677356_17 Uncharacterized conserved protein (DUF2249) - - - 0.0000000000000000000000000123 120.0
DYD3_k127_1677356_2 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis - - - 1.942e-227 710.0
DYD3_k127_1677356_3 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 589.0
DYD3_k127_1677356_4 Periplasmic copper-binding protein (NosD) K07218 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002175 539.0
DYD3_k127_1677356_5 Cytochrome C and Quinol oxidase polypeptide I K02274 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 417.0
DYD3_k127_1677356_6 ABC transporter K01990,K19340 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005001 372.0
DYD3_k127_1677356_7 ABC-2 family transporter protein K19341 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001346 325.0
DYD3_k127_1677356_8 PFAM Rieske 2Fe-2S domain K02636,K03886 - 1.10.9.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001202 275.0
DYD3_k127_1677356_9 lipoprotein involved in nitrous oxide reduction - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004542 261.0
DYD3_k127_1677914_0 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004902 357.0
DYD3_k127_1677914_1 amino acid K03294,K13868 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 319.0
DYD3_k127_1677914_2 carboxylic acid catabolic process K01736 - 4.2.3.5 0.00000000000000000000000000000000000000000000103 175.0
DYD3_k127_1677914_4 arylsulfatase activity K07014 - - 0.00000000000005584 83.0
DYD3_k127_1699444_0 DNA helicase K03654 - 3.6.4.12 1.136e-232 739.0
DYD3_k127_1699444_1 Pyridine nucleotide-disulphide oxidoreductase K03885,K10716 - 1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002913 458.0
DYD3_k127_1699444_2 gluconolactonase K01053 - 3.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006901 389.0
DYD3_k127_1699444_3 gluconolactonase activity K01053 - 3.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000888 282.0
DYD3_k127_1699444_4 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006950,GO:0008144,GO:0008150,GO:0009266,GO:0009314,GO:0009405,GO:0009408,GO:0009628,GO:0009966,GO:0009967,GO:0009986,GO:0009987,GO:0010646,GO:0010647,GO:0016032,GO:0016462,GO:0016465,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0018995,GO:0019058,GO:0019068,GO:0020003,GO:0022610,GO:0023051,GO:0023056,GO:0030430,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033643,GO:0033644,GO:0033646,GO:0033647,GO:0033648,GO:0033655,GO:0035639,GO:0035821,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043230,GO:0043656,GO:0043657,GO:0043900,GO:0043903,GO:0044174,GO:0044175,GO:0044183,GO:0044215,GO:0044216,GO:0044217,GO:0044218,GO:0044279,GO:0044403,GO:0044406,GO:0044419,GO:0044421,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0044650,GO:0044764,GO:0046812,GO:0046872,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051704,GO:0051817,GO:0052047,GO:0052212,GO:0061077,GO:0065007,GO:0065010,GO:0097159,GO:0097367,GO:0101031,GO:1901222,GO:1901224,GO:1901265,GO:1901363,GO:1902531,GO:1902533,GO:1990220,GO:2000535 - 0.0000000000000000000000000000000000000000000000000000000000000000000000007266 249.0
DYD3_k127_1699444_5 Nucleotidyl transferase AbiEii toxin, Type IV TA system - - - 0.000000000000000000000000000000000000000000000000000000000000000000002359 241.0
DYD3_k127_1699444_6 Recombinase - - - 0.00000000000000000000000000000000000000000000000000000000000000001028 244.0
DYD3_k127_1699444_7 DNA invertase Pin - - - 0.000000004782 63.0
DYD3_k127_1699444_8 Elongator protein 3, MiaB family, Radical SAM - - - 0.0007626 51.0
DYD3_k127_170034_0 acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003397 603.0
DYD3_k127_170034_1 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.0000000000000000000000000000000000000007319 153.0
DYD3_k127_170034_2 Secretin and TonB N terminus short domain K02666 - - 0.0000000000000000000000000000000004805 133.0
DYD3_k127_170034_3 Tetratricopeptide repeat - - - 0.000000000000000002128 97.0
DYD3_k127_170034_5 COG3291 FOG PKD repeat K01387 GO:0005575,GO:0005576 3.4.24.3 0.0000001685 62.0
DYD3_k127_170034_6 Roadblock/LC7 domain - - - 0.0000009587 55.0
DYD3_k127_170034_7 Bacterial membrane protein YfhO - - - 0.00001897 58.0
DYD3_k127_1721866_0 Alpha-amylase domain K05343 - 3.2.1.1,5.4.99.16 0.0 1174.0
DYD3_k127_1721866_1 Maltogenic Amylase, C-terminal domain K05343 - 3.2.1.1,5.4.99.16 8.804e-260 809.0
DYD3_k127_1721866_10 Sensors of blue-light using FAD - - - 0.00000000000000000000000000000000000000000001265 166.0
DYD3_k127_1721866_11 AI-2E family transporter - - - 0.000000000000000000000000000000000003444 151.0
DYD3_k127_1721866_12 transmembrane transport - - - 0.0000000000000000000000000004289 131.0
DYD3_k127_1721866_13 Bacterial regulatory proteins, tetR family - - - 0.000000000002967 75.0
DYD3_k127_1721866_2 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB K16147 - 2.4.99.16 4.289e-252 808.0
DYD3_k127_1721866_3 synthase K00705,K06044 GO:0000272,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005984,GO:0005991,GO:0005992,GO:0006073,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009251,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016052,GO:0016853,GO:0016866,GO:0030978,GO:0030980,GO:0034637,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044275,GO:0044424,GO:0044444,GO:0044464,GO:0046351,GO:0047470,GO:0071704,GO:1901575,GO:1901576 2.4.1.25,5.4.99.15 4.284e-244 785.0
DYD3_k127_1721866_4 Trehalase K01194 - 3.2.1.28 3.247e-207 662.0
DYD3_k127_1721866_5 Proton-conducting membrane transporter K00342 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 607.0
DYD3_k127_1721866_6 NADH ubiquinone oxidoreductase subunit 5 (Chain L) multisubunit Na H antiporter, MnhA subunit K00341 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009715 586.0
DYD3_k127_1721866_7 PFAM MscS Mechanosensitive ion channel K16052 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004507 537.0
DYD3_k127_1721866_8 GTP cyclohydrolase K01495 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 365.0
DYD3_k127_1721866_9 Glycosyl transferase family 2 K21349 - 2.4.1.268 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 313.0
DYD3_k127_1756839_0 tRNA synthetases class I (W and Y) K01867 GO:0003674,GO:0003824,GO:0004812,GO:0004830,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006436,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005559 434.0
DYD3_k127_1756839_1 Bacterial protein of unknown function (DUF885) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001809 398.0
DYD3_k127_1756839_2 phosphoserine phosphatase activity - - - 0.00000000000000000000000000000000000000000000000000001968 216.0
DYD3_k127_1756839_3 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.00000000000000000000000000000000000000000000000004959 193.0
DYD3_k127_1756839_4 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.00000000000000000000000000000000000000000000000205 183.0
DYD3_k127_1756839_5 Peptidase family M50 K06402 - - 0.00000000000000000000000000000000000000001563 173.0
DYD3_k127_1756839_6 Allergen V5 Tpx-1 family protein - - - 0.000004451 57.0
DYD3_k127_1758742_0 Anticodon-binding domain of tRNA K01873 - 6.1.1.9 0.0 1133.0
DYD3_k127_1758742_1 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003269 297.0
DYD3_k127_1758742_2 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.00000000000000000000000000000000000000000000000000000000000000000000001432 253.0
DYD3_k127_1758742_3 COG1654 Biotin operon repressor K03524 - 6.3.4.15 0.000000000000000000000000000000000354 149.0
DYD3_k127_1758742_4 outer membrane autotransporter barrel domain protein - - - 0.00000000009879 72.0
DYD3_k127_1758742_5 response regulator - - - 0.0002464 51.0
DYD3_k127_176678_0 Relaxes both positive and negative superturns and exhibits a strong decatenase activity K03167 - 5.99.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001564 605.0
DYD3_k127_176678_1 Cytochrome c - - - 0.0000000000000000000000000000000000000000000006525 179.0
DYD3_k127_176678_2 PFAM Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000129 172.0
DYD3_k127_176678_3 - - - - 0.000000000000000000000000008092 119.0
DYD3_k127_180217_0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S K00311 - 1.5.5.1 1.473e-197 631.0
DYD3_k127_180217_1 Serine dehydratase beta chain K01752 - 4.3.1.17 5.122e-195 645.0
DYD3_k127_180217_10 efflux transmembrane transporter activity K02004 - - 0.000003731 55.0
DYD3_k127_180217_11 - - - - 0.00002156 51.0
DYD3_k127_180217_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001568 576.0
DYD3_k127_180217_3 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002621 332.0
DYD3_k127_180217_4 electron transfer flavoprotein, alpha subunit K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002316 320.0
DYD3_k127_180217_5 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006404 311.0
DYD3_k127_180217_6 KR domain K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001967 286.0
DYD3_k127_180217_7 Histone deacetylase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002202 286.0
DYD3_k127_180217_8 Electron transfer flavoprotein domain K03521 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003597 252.0
DYD3_k127_180217_9 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000000000000000000001979 114.0
DYD3_k127_1844584_0 Protein of unknown function (DUF692) K09930 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004488 368.0
DYD3_k127_1844584_1 Aldehyde dehydrogenase family K00131 - 1.2.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002589 326.0
DYD3_k127_1844584_2 Dual specificity phosphatase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 323.0
DYD3_k127_1844584_3 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.0000000000000000000000000000000000007996 149.0
DYD3_k127_1844584_4 C4-type zinc ribbon domain K07164 - - 0.00000000000000000000000000000000005305 143.0
DYD3_k127_1844584_5 Putative DNA-binding domain - - - 0.000000000000000000000000000009726 136.0
DYD3_k127_1844584_6 tRNA (adenine(22)-N(1))-methyltransferase K06967 - 2.1.1.217 0.00000000000000000000000003536 122.0
DYD3_k127_1844584_7 - - - - 0.0001854 49.0
DYD3_k127_1857917_0 Reverse transcriptase (RNA-dependent DNA polymerase) K00986 - 2.7.7.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001979 610.0
DYD3_k127_1857917_1 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 347.0
DYD3_k127_1857917_2 Reverse transcriptase (RNA-dependent DNA polymerase) - - - 0.000008697 50.0
DYD3_k127_1862155_0 2-oxoglutarate dehydrogenase, E1 K00164 - 1.2.4.2 0.0 1312.0
DYD3_k127_1862155_1 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 7.075e-231 728.0
DYD3_k127_1862155_2 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008467 439.0
DYD3_k127_1862155_3 YmdB-like protein K09769 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006941 291.0
DYD3_k127_1862155_4 ABC-type transport system involved in lipoprotein release permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004919 266.0
DYD3_k127_1862155_5 ATPases associated with a variety of cellular activities K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000002356 242.0
DYD3_k127_1862155_6 WHG domain - - - 0.0000000000000000000000000000000000000000003529 165.0
DYD3_k127_1862155_7 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000005938 78.0
DYD3_k127_1862155_8 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K21135 - - 0.0002366 51.0
DYD3_k127_1874331_0 PFAM Leukotriene A4 hydrolase, C-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 574.0
DYD3_k127_1874331_1 PFAM peptidase U62 modulator of DNA gyrase K03568 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 541.0
DYD3_k127_1874331_2 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002375 363.0
DYD3_k127_1874331_3 tRNA pseudouridine synthase activity K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002089 279.0
DYD3_k127_1874331_4 Helix-hairpin-helix domain K04477 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001226 266.0
DYD3_k127_1874331_5 geranylgeranyl reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000007563 238.0
DYD3_k127_1874331_6 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 - - - 0.0000000000000000000000000000000000000000000000006092 191.0
DYD3_k127_1874331_7 Cytochrome c - - - 0.00000000000000000007448 105.0
DYD3_k127_1881622_0 Peptidase M64 N-terminus - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009362 500.0
DYD3_k127_1881622_1 DNA-templated transcription, termination K02887,K03628 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001861 366.0
DYD3_k127_1881622_2 Sulfatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006268 268.0
DYD3_k127_1881622_3 Signal peptidase, peptidase S26 K03100 - 3.4.21.89 0.00000000000000000000000000000000000000000000000000000000000002543 227.0
DYD3_k127_1881622_4 esterase - - - 0.0000000000000000000000000000000000000000000000000000000000002013 220.0
DYD3_k127_1900528_0 Peptidase dimerisation domain - - - 1.103e-218 689.0
DYD3_k127_1900528_1 Response regulator receiver - - - 4.089e-207 652.0
DYD3_k127_1900528_10 - - - - 0.000000000000007891 81.0
DYD3_k127_1900528_11 Tetratricopeptide repeat K12132 - 2.7.11.1 0.000000003952 63.0
DYD3_k127_1900528_12 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000001476 65.0
DYD3_k127_1900528_13 Acetyltransferase (GNAT) domain - - - 0.0000001051 61.0
DYD3_k127_1900528_14 WD40-like Beta Propeller Repeat - - - 0.00007088 48.0
DYD3_k127_1900528_2 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006129 604.0
DYD3_k127_1900528_3 PFAM adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003495 527.0
DYD3_k127_1900528_4 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005263 481.0
DYD3_k127_1900528_5 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 340.0
DYD3_k127_1900528_6 Hep Hag repeat protein - GO:0005575,GO:0005576 - 0.0000000000000000000000000000000000000000000000000000000003638 213.0
DYD3_k127_1900528_7 - K07018 - - 0.000000000000000000000000000000000000000000000000005709 188.0
DYD3_k127_1900528_8 endoribonuclease L-PSP - - - 0.00000000000000000000000000000000000000008932 155.0
DYD3_k127_1900528_9 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity K00316 - 1.5.99.6 0.0000000000000000004909 98.0
DYD3_k127_1910036_0 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002694 381.0
DYD3_k127_1910036_1 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000265 378.0
DYD3_k127_1910036_2 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002662 290.0
DYD3_k127_1910036_3 His Kinase A (phosphoacceptor) domain K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000009398 184.0
DYD3_k127_1910036_4 - - - - 0.000000000000000000000000000000000000000006862 160.0
DYD3_k127_1910036_5 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000007021 96.0
DYD3_k127_1913315_0 PA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008297 376.0
DYD3_k127_1913315_1 Protein kinase domain - - - 0.000000000000000000000000000000000000000000000000000000000003945 222.0
DYD3_k127_1913315_2 Protein kinase domain - - - 0.00000000000000000000000000000000000000000000006303 177.0
DYD3_k127_1913315_3 Transmembrane secretion effector - - - 0.0000000000000000000000000000000000005147 151.0
DYD3_k127_1913315_4 redox protein regulator of disulfide bond formation K07397 - - 0.0000000000000000001501 93.0
DYD3_k127_1913315_5 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.00000005503 66.0
DYD3_k127_1913315_6 Protein kinase domain - - - 0.000007243 55.0
DYD3_k127_1913315_7 PhoQ Sensor - - - 0.00007532 55.0
DYD3_k127_1956146_0 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 405.0
DYD3_k127_1956146_1 Peptidase family M1 domain K01256 - 3.4.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002359 393.0
DYD3_k127_1956146_10 Cytidylyltransferase family K00981 - 2.7.7.41 0.0000000000000000000000000000000000185 148.0
DYD3_k127_1956146_11 Glycosyltransferase Family 4 - - - 0.0000005427 61.0
DYD3_k127_1956146_2 Two component regulator propeller - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001754 383.0
DYD3_k127_1956146_3 exo-alpha-(2->6)-sialidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006933 310.0
DYD3_k127_1956146_4 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001775 294.0
DYD3_k127_1956146_5 zinc metalloprotease K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005396 271.0
DYD3_k127_1956146_6 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000004865 228.0
DYD3_k127_1956146_7 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000000000000000005781 208.0
DYD3_k127_1956146_8 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.00000000000000000000000000000000000000000000004395 188.0
DYD3_k127_1956146_9 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000002401 178.0
DYD3_k127_195877_0 Ami_3 K01448 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002568 340.0
DYD3_k127_195877_1 Phosphate acyltransferases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001884 333.0
DYD3_k127_195877_2 PFAM Patatin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000175 273.0
DYD3_k127_195877_3 NAD dependent epimerase/dehydratase family K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000001451 173.0
DYD3_k127_195877_4 methyltransferase activity - - - 0.00000000000000000000000000000331 125.0
DYD3_k127_195877_5 PHB/PHA accumulation regulator DNA-binding domain - - - 0.00000000003807 72.0
DYD3_k127_195877_6 Protein of unknown function (DUF1059) - - - 0.00000001996 57.0
DYD3_k127_1983506_0 Cellulose synthase catalytic subunit (UDP-forming) K00694 - 2.4.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005662 492.0
DYD3_k127_1983506_1 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000198 425.0
DYD3_k127_1983506_10 ABC-type multidrug transport system ATPase component - - - 0.000000000001876 78.0
DYD3_k127_1983506_11 cellulose synthase K00694 - 2.4.1.12 0.0000000001235 75.0
DYD3_k127_1983506_12 4Fe-4S binding domain K00395,K02572,K03616 - 1.8.99.2 0.00005146 53.0
DYD3_k127_1983506_2 Belongs to the D-alanine--D-alanine ligase family K01921,K01955 - 6.3.2.4,6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003337 438.0
DYD3_k127_1983506_3 Protein tyrosine kinase K08282,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002406 374.0
DYD3_k127_1983506_4 PFAM Glycosyl hydrolases family 8 K20542 - 3.2.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000003683 265.0
DYD3_k127_1983506_5 - - - - 0.0000000000000000000000000000000000000007621 152.0
DYD3_k127_1983506_6 serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000006774 165.0
DYD3_k127_1983506_7 hydroperoxide reductase activity K01607 - 4.1.1.44 0.0000000000000000000000000004236 115.0
DYD3_k127_1983506_8 SdrD B-like domain - - - 0.0000000000000000000000006183 122.0
DYD3_k127_1983506_9 Histidine kinase-like ATPase domain - - - 0.00000000000000000001641 96.0
DYD3_k127_1986772_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 1.646e-197 649.0
DYD3_k127_1986772_1 Aminopeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 522.0
DYD3_k127_1986772_10 phosphohistidine phosphatase, SixA K08296 - - 0.0000000000000002013 85.0
DYD3_k127_1986772_11 Domain of unknown function (DUF309) K09763 - - 0.0000000000000002078 89.0
DYD3_k127_1986772_12 DinB superfamily - - - 0.00000000000000112 88.0
DYD3_k127_1986772_13 PFAM CHAD domain containing protein - - - 0.000000002927 69.0
DYD3_k127_1986772_2 Ppx GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001466 393.0
DYD3_k127_1986772_3 PFAM Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003116 381.0
DYD3_k127_1986772_4 Belongs to the peptidase M48B family K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001117 272.0
DYD3_k127_1986772_5 Pfam Uncharacterised protein family UPF0047 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004761 269.0
DYD3_k127_1986772_6 Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002652 247.0
DYD3_k127_1986772_7 Asp/Glu/Hydantoin racemase K01779 - 5.1.1.13 0.000000000000000000000000000000000000000000000000000000000000000000001742 246.0
DYD3_k127_1986772_8 Putative regulatory protein - - - 0.00000000000000000000000000000000000000000000000000000002489 200.0
DYD3_k127_1986772_9 retrograde transport, endosome to Golgi K07095 - - 0.000000000000000104 91.0
DYD3_k127_2000849_0 Domain of unknown function (DUF1998) K06877 - - 7.486e-286 899.0
DYD3_k127_2000849_1 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004638 472.0
DYD3_k127_2000849_10 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant K02825 - 2.4.2.9 0.000000000000000000000000000000000000000000000000000000000001767 223.0
DYD3_k127_2000849_11 Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( K02823 - - 0.00000000000000000000000000000000000000000000000003993 188.0
DYD3_k127_2000849_12 haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000003944 181.0
DYD3_k127_2000849_13 Radical SAM domain protein - - - 0.00000000000000000000000002816 123.0
DYD3_k127_2000849_14 Putative tRNA binding domain K06878 GO:0000049,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0017101,GO:0017102,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000003274 94.0
DYD3_k127_2000849_15 response regulator K07658 - - 0.000000001384 69.0
DYD3_k127_2000849_16 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 0.000000003568 70.0
DYD3_k127_2000849_17 Glutaredoxin-like domain (DUF836) K00384 - 1.8.1.9 0.00000000712 68.0
DYD3_k127_2000849_18 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily K00226,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.98.1 0.00000002047 56.0
DYD3_k127_2000849_2 Belongs to the ATCase OTCase family K00608,K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030312,GO:0034641,GO:0034654,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002301 390.0
DYD3_k127_2000849_3 Psort location CytoplasmicMembrane, score - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 391.0
DYD3_k127_2000849_4 Iron Permease K07243 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002051 347.0
DYD3_k127_2000849_5 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily K00254,K02823,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006969 310.0
DYD3_k127_2000849_6 Pyrroloquinoline quinone biosynthesis protein PqqB K06136 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007391 286.0
DYD3_k127_2000849_7 Exonuclease K07502 - - 0.00000000000000000000000000000000000000000000000000000000000000003905 248.0
DYD3_k127_2000849_8 TIGRFAM GTP cyclohydrolase I K01495 - 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000001968 224.0
DYD3_k127_2000849_9 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000002598 230.0
DYD3_k127_2002839_0 5'-nucleotidase, C-terminal domain K11751 - 3.1.3.5,3.6.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001783 536.0
DYD3_k127_2002839_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000097 473.0
DYD3_k127_2002839_2 asparaginase K01424,K01444,K13051 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.19.5,3.5.1.1,3.5.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002902 449.0
DYD3_k127_2002839_3 Polysulphide reductase, NrfD - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 435.0
DYD3_k127_2002839_4 beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008197 379.0
DYD3_k127_2002839_5 4Fe-4S dicluster domain - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000833 334.0
DYD3_k127_2002839_6 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K11072 - 3.6.3.31 0.0000000000000000000000000000000000000000000000000000000000000000000000008315 250.0
DYD3_k127_2002839_7 Glycine cleavage H-protein - - - 0.0000000000000000000000000000000000000000000000000000001215 209.0
DYD3_k127_2002839_8 glycine decarboxylation via glycine cleavage system K02437 - - 0.0000000000000000000000000000000000000000000111 170.0
DYD3_k127_2002839_9 Methionine biosynthesis protein MetW - - - 0.000000000000000000000000000000000000000003172 162.0
DYD3_k127_2012627_0 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004414 458.0
DYD3_k127_2012627_1 Peptidase family M23 K21471 GO:0000920,GO:0001896,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008219,GO:0009273,GO:0009314,GO:0009628,GO:0009987,GO:0012501,GO:0016020,GO:0016787,GO:0030288,GO:0030313,GO:0031975,GO:0032153,GO:0042221,GO:0042493,GO:0042546,GO:0042597,GO:0043085,GO:0044085,GO:0044093,GO:0044464,GO:0050790,GO:0050896,GO:0051301,GO:0051336,GO:0051345,GO:0065007,GO:0065009,GO:0071554,GO:0071840,GO:0071944 - 0.00000000000000000000000000000000000000000001416 178.0
DYD3_k127_2012627_2 DoxX - - - 0.00000000000000004007 88.0
DYD3_k127_2012627_3 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 GO:0005575,GO:0005576 - 0.000000005181 59.0
DYD3_k127_2013427_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K04105,K04110 - 6.2.1.25,6.2.1.27 9.084e-204 651.0
DYD3_k127_2013427_1 radical SAM domain protein K22318 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006967 611.0
DYD3_k127_2013427_2 Serine threonine protein kinase K08282,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 383.0
DYD3_k127_2013427_3 FAD dependent oxidoreductase K00285,K03153 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016491,GO:0016638,GO:0016641,GO:0017144,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0036094,GO:0042364,GO:0042723,GO:0042724,GO:0043167,GO:0043168,GO:0043436,GO:0043799,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071704,GO:0071949,GO:0072527,GO:0072528,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.4.3.19,1.4.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002645 332.0
DYD3_k127_2013427_4 catalyzes the formation of indole and pyruvate from tryptophan K01667 - 4.1.99.1 0.000000000000000000000000000000000000000000000000000000000000002564 221.0
DYD3_k127_2085751_0 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 357.0
DYD3_k127_2085751_1 O-Antigen ligase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 359.0
DYD3_k127_2085751_10 Aminoglycoside phosphotransferase - - - 0.000000000000000006553 93.0
DYD3_k127_2085751_2 Glycosyl transferase 4-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000924 346.0
DYD3_k127_2085751_3 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000697 297.0
DYD3_k127_2085751_4 Sulfotransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006265 280.0
DYD3_k127_2085751_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001574 263.0
DYD3_k127_2085751_6 Belongs to the glycosyltransferase 26 family K05946 - 2.4.1.187 0.000000000000000000000000000000000000000000000000000000000000000000004098 257.0
DYD3_k127_2085751_7 ATP-grasp domain - - - 0.000000000000000000000000000000000000000000000000000000000000004191 233.0
DYD3_k127_2085751_8 - - - - 0.00000000000000000000000000000000000000000000000006877 195.0
DYD3_k127_2085751_9 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000482 182.0
DYD3_k127_2090480_0 Oxidoreductase molybdopterin binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008529 475.0
DYD3_k127_2090480_1 Translation elongation factor K03833 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008562 462.0
DYD3_k127_2090480_2 Belongs to the GPI family K01810 GO:0003674,GO:0003824,GO:0004347,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 5.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002398 377.0
DYD3_k127_2090480_3 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005758 287.0
DYD3_k127_2090480_4 serine threonine protein kinase K08884,K12132 GO:0002237,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005539,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009617,GO:0009719,GO:0009847,GO:0009987,GO:0010033,GO:0010243,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0023052,GO:0032494,GO:0032502,GO:0036211,GO:0042221,GO:0042834,GO:0043170,GO:0043207,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051704,GO:0051707,GO:0051716,GO:0065007,GO:0070887,GO:0071216,GO:0071219,GO:0071224,GO:0071310,GO:0071417,GO:0071495,GO:0071704,GO:0071944,GO:0097367,GO:0140096,GO:1901564,GO:1901698,GO:1901699,GO:1901700,GO:1901701 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000006672 229.0
DYD3_k127_2090480_5 COG0747 ABC-type dipeptide transport system, periplasmic component K02035,K12368 - - 0.0000000000000000000000000000000000000000000000006967 196.0
DYD3_k127_2090480_6 4Fe-4S ferredoxin, iron-sulfur binding - - - 0.0000000000000000000000000003013 129.0
DYD3_k127_2090480_7 response regulator - - - 0.0000005674 56.0
DYD3_k127_2148214_0 L-lactate dehydrogenase K00101,K16422 - 1.1.2.3,1.1.3.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003889 516.0
DYD3_k127_2148214_1 transposition - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006575 478.0
DYD3_k127_2148214_2 arylsulfatase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001808 327.0
DYD3_k127_2148214_3 Transcriptional regulator PadR-like family - - - 0.0000000000000000000000000000003547 125.0
DYD3_k127_2148214_4 alcohol dehydrogenase - - - 0.0000000004067 73.0
DYD3_k127_2148214_5 COG2801 Transposase and inactivated derivatives - - - 0.00000000569 67.0
DYD3_k127_2148214_6 Putative transposase - - - 0.0001187 48.0
DYD3_k127_2167797_0 Zn-dependent dipeptidase, microsomal dipeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 395.0
DYD3_k127_2167797_1 Haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000000000000000000000005785 194.0
DYD3_k127_2167797_2 PFAM Short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000003642 109.0
DYD3_k127_2185845_0 (ABC) transporter K06147,K18890 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005214 633.0
DYD3_k127_2185845_1 ABC transporter, transmembrane K18889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008316 577.0
DYD3_k127_2185845_10 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.000000000000000000000000000000000000001334 154.0
DYD3_k127_2185845_11 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000003955 165.0
DYD3_k127_2185845_12 TIGRFAM 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 - 2.7.6.3 0.000000000000000000000000000000000000004011 151.0
DYD3_k127_2185845_13 Creatinine amidohydrolase K01470 - 3.5.2.10 0.00000000000000000000000000003627 136.0
DYD3_k127_2185845_14 Antitoxin component of a type II toxin-antitoxin (TA) system. Upon K19687 GO:0008150,GO:0040008,GO:0045927,GO:0048518,GO:0050789,GO:0065007 - 0.000000000000000000000004297 104.0
DYD3_k127_2185845_15 Tetratricopeptide repeat - - - 0.00004067 55.0
DYD3_k127_2185845_16 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0001251 54.0
DYD3_k127_2185845_17 Protein of unknown function DUF86 - - - 0.0004693 51.0
DYD3_k127_2185845_2 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009662 408.0
DYD3_k127_2185845_3 Peptidase dimerisation domain K01436 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004277 363.0
DYD3_k127_2185845_4 Deoxynucleoside kinase K15518 - 2.7.1.113 0.0000000000000000000000000000000000000000000000000000000000000001161 236.0
DYD3_k127_2185845_5 Belongs to the pseudouridine synthase RsuA family K06178,K06183 - 5.4.99.19,5.4.99.22 0.000000000000000000000000000000000000000000000000000000000002044 226.0
DYD3_k127_2185845_6 serine threonine protein kinase K08884,K12132 GO:0000270,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005623,GO:0006022,GO:0006023,GO:0006024,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008047,GO:0008150,GO:0008152,GO:0008360,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009605,GO:0009607,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0010698,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019216,GO:0019217,GO:0019222,GO:0019538,GO:0022603,GO:0022604,GO:0030145,GO:0030203,GO:0030234,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032091,GO:0034645,GO:0036211,GO:0040007,GO:0042304,GO:0042546,GO:0042802,GO:0043085,GO:0043086,GO:0043167,GO:0043169,GO:0043170,GO:0043207,GO:0043388,GO:0043393,GO:0043412,GO:0044036,GO:0044038,GO:0044085,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044403,GO:0044419,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046777,GO:0046872,GO:0046890,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051055,GO:0051098,GO:0051099,GO:0051100,GO:0051101,GO:0051128,GO:0051701,GO:0051704,GO:0051707,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0062012,GO:0062014,GO:0065007,GO:0065008,GO:0065009,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:0075136,GO:0080090,GO:0098772,GO:0140096,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000009221 225.0
DYD3_k127_2185845_7 Toxic component of a toxin-antitoxin (TA) module. An RNase K19686 - - 0.00000000000000000000000000000000000000000008394 166.0
DYD3_k127_2185845_8 Catalyzes the NAD( )-dependent oxidation of L-threonine to 2-amino-3-ketobutyrate K00060 - 1.1.1.103 0.0000000000000000000000000000000000000000003689 160.0
DYD3_k127_2185845_9 nucleotide metabolic process - - - 0.0000000000000000000000000000000000000000915 163.0
DYD3_k127_2196633_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00174 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0030312,GO:0044464,GO:0050896,GO:0055114,GO:0071944 1.2.7.11,1.2.7.3 8.744e-244 792.0
DYD3_k127_2196633_1 Glycosyl hydrolase family 3 K05349 - 3.2.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 612.0
DYD3_k127_2196633_2 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016491,GO:0016625,GO:0016903,GO:0016999,GO:0017144,GO:0019752,GO:0030312,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0046872,GO:0047553,GO:0055114,GO:0071704,GO:0071944,GO:0072350 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002461 460.0
DYD3_k127_2203617_0 Cyclomaltodextrinase, N-terminal K21575 - 3.2.1.135 2.698e-212 697.0
DYD3_k127_2203617_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 1.97e-196 628.0
DYD3_k127_2203617_2 Major facilitator Superfamily K16211 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001821 614.0
DYD3_k127_2203617_3 PFAM glycoside hydrolase, family 77 K00705 - 2.4.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004562 565.0
DYD3_k127_2203617_4 PFAM regulatory protein, LysR - - - 0.0000000000000000000000000000000000001444 153.0
DYD3_k127_2203617_5 Iron-binding zinc finger CDGSH type K05710 - - 0.000000000000000000000003211 106.0
DYD3_k127_2203617_6 Aminomethyltransferase folate-binding domain K06980 - - 0.0000003101 61.0
DYD3_k127_2203617_8 AAA ATPase central domain protein - - - 0.0002231 53.0
DYD3_k127_2211228_0 Glycosyl hydrolase family 115 - - - 0.0 1149.0
DYD3_k127_2211228_1 Periplasmic copper-binding protein (NosD) - - - 4.323e-229 729.0
DYD3_k127_2211228_2 Major Facilitator Superfamily - - - 7.392e-195 627.0
DYD3_k127_2211228_3 Glycosyl hydrolase family 52 K22268 - 3.2.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 503.0
DYD3_k127_2211228_4 endo-1,4-beta-xylanase activity K01181 - 3.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001976 414.0
DYD3_k127_2211228_5 MFS/sugar transport protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003376 366.0
DYD3_k127_2211228_6 hydrolase, family 65, central catalytic - - - 0.000000000000000000000009365 100.0
DYD3_k127_2234235_0 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008948 391.0
DYD3_k127_2234235_1 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 364.0
DYD3_k127_2234235_2 Barrel-sandwich domain of CusB or HlyD membrane-fusion K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004029 304.0
DYD3_k127_2234235_3 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000878 286.0
DYD3_k127_2234235_4 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.0000000000000000000000000000000000000000008429 173.0
DYD3_k127_2234235_6 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.0002948 47.0
DYD3_k127_224922_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 4.114e-254 812.0
DYD3_k127_224922_1 Type II/IV secretion system protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008937 531.0
DYD3_k127_224922_10 Zn peptidase - - - 0.000000000000000000000000000000000001905 157.0
DYD3_k127_224922_11 Transglycosylase SLT domain K08309 - - 0.00000000000000000000000000000000000372 149.0
DYD3_k127_224922_12 peptidyl-tyrosine sulfation - - - 0.0000000000000000000007033 109.0
DYD3_k127_224922_13 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.00000000000000001635 92.0
DYD3_k127_224922_14 Modulates RecA activity K03565 - - 0.00000000000001378 80.0
DYD3_k127_224922_15 Domain of unknown function (DUF4870) - - - 0.00000000000002193 78.0
DYD3_k127_224922_16 - - - - 0.000000001606 71.0
DYD3_k127_224922_17 Belongs to the acylphosphatase family K01512 - 3.6.1.7 0.00000006157 55.0
DYD3_k127_224922_18 outer membrane lipoprotein carrier protein LolA K03634 - - 0.0000005522 59.0
DYD3_k127_224922_19 Cell division cycle protein 27 homolog K03350 GO:0000003,GO:0000151,GO:0000152,GO:0003006,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005680,GO:0005737,GO:0005819,GO:0005856,GO:0007275,GO:0007346,GO:0008150,GO:0009504,GO:0009653,GO:0009719,GO:0009725,GO:0009733,GO:0009790,GO:0009791,GO:0009793,GO:0009888,GO:0009933,GO:0009987,GO:0010014,GO:0010015,GO:0010033,GO:0010071,GO:0010154,GO:0015630,GO:0022414,GO:0022622,GO:0030154,GO:0031461,GO:0032501,GO:0032502,GO:0032991,GO:0042221,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0048316,GO:0048364,GO:0048507,GO:0048508,GO:0048532,GO:0048608,GO:0048731,GO:0048829,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051726,GO:0061458,GO:0065007,GO:0090421,GO:0099402,GO:1902494,GO:1905392,GO:1990234 - 0.000001197 61.0
DYD3_k127_224922_2 Peptidase family S49 K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005295 410.0
DYD3_k127_224922_3 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005189 367.0
DYD3_k127_224922_4 Catalyzes the conversion of 3'-phosphate to a 2',3'- cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps (A) adenylation of the enzyme by ATP K01974 GO:0003674,GO:0003824,GO:0003963,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009975,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016886,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:1901360 6.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000001685 278.0
DYD3_k127_224922_5 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003652 262.0
DYD3_k127_224922_6 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.000000000000000000000000000000000000000000000000000000000000000000000711 241.0
DYD3_k127_224922_7 PFAM Thymidine kinase K00857 - 2.7.1.21 0.0000000000000000000000000000000000000000000000000000000000000000002065 234.0
DYD3_k127_224922_8 GHMP kinases C terminal K07031 - 2.7.1.168 0.00000000000000000000000000000000000000000000000000000000004163 217.0
DYD3_k127_224922_9 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.0000000000000000000000000000000000000000000000000000000004471 206.0
DYD3_k127_229774_0 Heparinase II/III N-terminus - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001774 262.0
DYD3_k127_229774_1 polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000002492 248.0
DYD3_k127_229774_2 Lipopolysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000083 208.0
DYD3_k127_229774_3 Bacterial sugar transferase - - - 0.000000000000000000000000000000000000000000000000005797 202.0
DYD3_k127_229774_4 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon K00966,K05305,K16881 - 2.7.1.52,2.7.7.13,5.4.2.8 0.000000000000000000000000000000000000000000000002199 187.0
DYD3_k127_229774_5 ParB-like nuclease domain K03497 - - 0.0000000000000000000000000000000000000000000003175 177.0
DYD3_k127_229774_6 Polysaccharide biosynthesis/export protein K01991 - - 0.0000000000000000000000000000000000000191 151.0
DYD3_k127_229774_7 TIGRFAM capsular exopolysaccharide family K08252 - 2.7.10.1 0.00000000000000000000000000001909 135.0
DYD3_k127_229774_8 chromosome segregation K03497 - - 0.0000000000000183 78.0
DYD3_k127_229774_9 PFAM Polyphosphate kinase 2 (PPK2) - - - 0.0000015 51.0
DYD3_k127_2300758_0 Cytochrome c-type biogenesis protein K02198 - - 2.749e-203 659.0
DYD3_k127_2300758_1 Cytochrome C assembly protein K02195 - - 0.000000000000000000000000000000000000000000000000000000000001136 228.0
DYD3_k127_2300758_2 ATPase activity K01990,K02193 - 3.6.3.41 0.000000000000000000000000000000000000000000000000000000007412 206.0
DYD3_k127_2300758_3 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.0000000000000000000000000000000000000000000000000001054 198.0
DYD3_k127_2300758_4 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.000000000000000000000000000000000000001015 154.0
DYD3_k127_2300758_5 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00000004609 59.0
DYD3_k127_2303848_0 Putative Na+/H+ antiporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002291 537.0
DYD3_k127_2303848_1 PFAM sodium calcium exchanger K07301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004643 303.0
DYD3_k127_2303848_2 ligase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001805 284.0
DYD3_k127_2303848_3 PFAM alpha beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000004418 198.0
DYD3_k127_2303848_4 Sulfatase - - - 0.00000000000000000000000000000000000000000000000004234 201.0
DYD3_k127_231004_0 Alcohol dehydrogenase GroES-like domain K00008 - 1.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001873 422.0
DYD3_k127_231004_1 Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008586 394.0
DYD3_k127_231004_10 Diacylglycerol kinase catalytic domain (presumed) K07029 - 2.7.1.107 0.000000000000000000000000000000000000000761 167.0
DYD3_k127_231004_11 Belongs to the ParB family K03497 - - 0.000000000000000000000000000000000000001523 160.0
DYD3_k127_231004_12 GtrA-like protein K00995 - 2.7.8.5 0.0000000000000000000000000000001154 142.0
DYD3_k127_231004_13 lipid kinase activity - - - 0.000000000000000000000003198 116.0
DYD3_k127_231004_14 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.0000001788 62.0
DYD3_k127_231004_15 Radical SAM K18563 - - 0.00001497 53.0
DYD3_k127_231004_2 DeoC/LacD family aldolase K08321 - 2.3.1.245 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001909 348.0
DYD3_k127_231004_3 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA K00639,K21784 - 2.3.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000181 339.0
DYD3_k127_231004_4 Cobyrinic acid ac-diamide synthase K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002036 285.0
DYD3_k127_231004_5 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.000000000000000000000000000000000000000000000000000000000000000000001524 244.0
DYD3_k127_231004_6 lipoprotein localization to outer membrane K02004,K09808 - - 0.00000000000000000000000000000000000000000000000000000000000000003436 237.0
DYD3_k127_231004_7 Bifunctional nuclease K08999 - - 0.0000000000000000000000000000000000000000000000000000000466 200.0
DYD3_k127_231004_8 KR domain K07124 - - 0.00000000000000000000000000000000000000000000000000001357 199.0
DYD3_k127_231004_9 methyltransferase - - - 0.00000000000000000000000000000000000000002745 159.0
DYD3_k127_2317536_0 FecR protein - - - 3.883e-262 848.0
DYD3_k127_2317536_1 PFAM peptidase S45 penicillin amidase K01434 - 3.5.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 473.0
DYD3_k127_2317536_2 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004638 432.0
DYD3_k127_2317536_3 Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine K00641 - 2.3.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006498 435.0
DYD3_k127_2317536_4 serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004328 412.0
DYD3_k127_2361430_0 Sodium:alanine symporter family K03310 - - 1.872e-208 659.0
DYD3_k127_2361430_1 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006414 482.0
DYD3_k127_2361430_10 PFAM Ribose galactose isomerase K01808 - 5.3.1.6 0.000000000000000000000000000000000000003981 155.0
DYD3_k127_2361430_11 Cation transport ATPase K01534 - 3.6.3.3,3.6.3.5 0.00000004085 55.0
DYD3_k127_2361430_2 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005552 408.0
DYD3_k127_2361430_3 Amidohydrolase family K12960 - 3.5.4.28,3.5.4.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007506 320.0
DYD3_k127_2361430_4 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001002 282.0
DYD3_k127_2361430_5 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 - 4.1.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000006899 273.0
DYD3_k127_2361430_6 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000002952 224.0
DYD3_k127_2361430_7 outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000006314 233.0
DYD3_k127_2361430_8 Probably catalyzes the deacetylation of acetylated carbohydrates an important step in the degradation of oligosaccharides K02759,K03478 - 2.7.1.196,2.7.1.205,3.5.1.105 0.0000000000000000000000000000000000000000000907 177.0
DYD3_k127_2361430_9 Protein of unknown function (DUF498/DUF598) - - - 0.000000000000000000000000000000000000000001662 170.0
DYD3_k127_2395254_0 phosphoribosylamine-glycine ligase activity K01945,K01955 - 6.3.4.13,6.3.5.5 8.883e-198 651.0
DYD3_k127_2395254_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005123 486.0
DYD3_k127_2395254_2 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003126 340.0
DYD3_k127_2395254_3 Signal transduction histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004453 361.0
DYD3_k127_2395254_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005869 317.0
DYD3_k127_2395254_5 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000003197 185.0
DYD3_k127_2395254_6 Uncharacterized conserved protein (DUF2203) - - - 0.000000000000000000005088 97.0
DYD3_k127_2417573_0 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007124 462.0
DYD3_k127_2417573_1 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.00000000000000000000000000000000000000000000000000000000000000000009849 258.0
DYD3_k127_2417573_2 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000127 175.0
DYD3_k127_2417573_3 - - - - 0.000000000000000000000000000000000000004409 154.0
DYD3_k127_2417573_4 PFAM Rieske 2Fe-2S domain protein K00363,K05710 - 1.7.1.15 0.000000000000000000000007935 104.0
DYD3_k127_2417573_5 Protein conserved in bacteria K09986 - - 0.00000000004596 69.0
DYD3_k127_2432697_0 ligase activity, forming nitrogen-metal bonds K02230 - 6.6.1.2 0.0 1380.0
DYD3_k127_2432697_1 Amylo-alpha-1,6-glucosidase - - - 6.522e-258 815.0
DYD3_k127_2432697_10 penicillin-binding protein - - - 0.00000000000000000000000000000000000002827 158.0
DYD3_k127_2432697_11 Cupin 2, conserved barrel domain protein K11477 - - 0.0000000000000000000000000000000000001721 146.0
DYD3_k127_2432697_12 Peptidase M56 - - - 0.00000000000005182 85.0
DYD3_k127_2432697_15 PFAM PEGA domain - - - 0.00001366 57.0
DYD3_k127_2432697_16 Putative zinc-finger - - - 0.0005076 46.0
DYD3_k127_2432697_2 choline dehydrogenase activity - - - 9.83e-257 800.0
DYD3_k127_2432697_3 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006921 408.0
DYD3_k127_2432697_4 Major intrinsic protein K06188 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007425 282.0
DYD3_k127_2432697_5 gluconolactonase activity K01053 - 3.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001819 283.0
DYD3_k127_2432697_6 Glycogen recognition site of AMP-activated protein kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000765 273.0
DYD3_k127_2432697_7 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000000000000000000000003303 194.0
DYD3_k127_2432697_8 Cupin 2, conserved barrel domain protein K11477 - - 0.000000000000000000000000000000000000000000000000699 179.0
DYD3_k127_2432697_9 Sigma-70, region 4 K03088 GO:0000988,GO:0000990,GO:0003674,GO:0005575,GO:0005618,GO:0005623,GO:0006355,GO:0006950,GO:0006979,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0016987,GO:0019219,GO:0019222,GO:0030312,GO:0031323,GO:0031326,GO:0033554,GO:0034605,GO:0043254,GO:0044087,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051252,GO:0051409,GO:0051716,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2000142,GO:2001141 - 0.00000000000000000000000000000000000002221 151.0
DYD3_k127_2448905_0 TIGRFAM ornithine aminotransferase K00819 - 2.6.1.13 1.585e-197 632.0
DYD3_k127_2448905_1 Pyruvate:ferredoxin oxidoreductase core domain II K00186 - 1.2.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 608.0
DYD3_k127_2448905_10 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03753,K13818 - 2.7.7.77 0.000000000000000000000000001764 125.0
DYD3_k127_2448905_11 WD40-like Beta Propeller Repeat - - - 0.00000000000000000001917 101.0
DYD3_k127_2448905_12 Amidohydrolase family - - - 0.00000000000006638 81.0
DYD3_k127_2448905_13 PA domain - - - 0.000000000002632 74.0
DYD3_k127_2448905_14 - - - - 0.0000000005207 62.0
DYD3_k127_2448905_15 Domain of unknown function (DUF4442) - - - 0.0000001389 61.0
DYD3_k127_2448905_16 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.0000006716 54.0
DYD3_k127_2448905_2 NapC/NirT cytochrome c family, N-terminal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002104 527.0
DYD3_k127_2448905_3 PFAM Thiamine pyrophosphate K00175,K00187 - 1.2.7.11,1.2.7.3,1.2.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005868 314.0
DYD3_k127_2448905_4 formate dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000891 302.0
DYD3_k127_2448905_5 Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000495 261.0
DYD3_k127_2448905_6 cAMP biosynthetic process K08282,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000001136 260.0
DYD3_k127_2448905_7 Cytochrome c554 and c-prime - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003863 254.0
DYD3_k127_2448905_8 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.000000000000000000000000000000000000000000000000000000000000000000005203 244.0
DYD3_k127_2448905_9 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.0000000000000000000000000000000000000001954 157.0
DYD3_k127_2455278_0 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000216 540.0
DYD3_k127_2455278_1 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005637 454.0
DYD3_k127_2455278_2 response regulator K13599 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004203 386.0
DYD3_k127_2455278_3 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001989 309.0
DYD3_k127_2455278_4 Putative ATP-binding cassette K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006422 310.0
DYD3_k127_2455278_5 PFAM transglutaminase domain protein - - - 0.000000000000000000000000000000000000000000175 174.0
DYD3_k127_2455278_6 SMART phosphoesterase PHP domain protein - - - 0.0000000009649 68.0
DYD3_k127_2542571_0 ABC-type multidrug transport system ATPase component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 437.0
DYD3_k127_2542571_1 Chalcone isomerase-like - - - 0.00000000006932 70.0
DYD3_k127_2542571_2 general secretion pathway protein - - - 0.000001948 51.0
DYD3_k127_2559793_0 response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 503.0
DYD3_k127_2559793_1 His Kinase A (phosphoacceptor) domain K02484 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007315 514.0
DYD3_k127_2559793_2 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) K13924 - 2.1.1.80,3.1.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001846 351.0
DYD3_k127_2559793_3 Rhomboid family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006109 276.0
DYD3_k127_2559793_4 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000007815 196.0
DYD3_k127_2559793_5 pilus organization - - - 0.00000000000003135 73.0
DYD3_k127_2559793_6 - - - - 0.000000000006638 69.0
DYD3_k127_2559793_7 Penicillin-binding protein 1A K05366 - 2.4.1.129,3.4.16.4 0.00005135 49.0
DYD3_k127_2561107_0 3-oxoacid CoA-transferase, a subunit K01027,K01028,K01031,K01034 - 2.8.3.5,2.8.3.6,2.8.3.8,2.8.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002701 557.0
DYD3_k127_2561107_1 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 GO:0000162,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001592 493.0
DYD3_k127_2561107_10 N-(5'phosphoribosyl)anthranilate (PRA) isomerase K01817 - 5.3.1.24 0.000000000000000000001016 98.0
DYD3_k127_2561107_11 Chorismate mutase type II - - - 0.0000000000000000005197 100.0
DYD3_k127_2561107_12 - - - - 0.00000000000005859 76.0
DYD3_k127_2561107_13 phosphate ion binding K02040 - - 0.00000000000009479 77.0
DYD3_k127_2561107_14 - K01992 - - 0.0001174 55.0
DYD3_k127_2561107_2 NeuB family K03856 - 2.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 451.0
DYD3_k127_2561107_3 acyl-CoA transferase carnitine dehydratase K18702 - 2.8.3.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018 429.0
DYD3_k127_2561107_4 ATPases associated with a variety of cellular activities K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001739 287.0
DYD3_k127_2561107_5 Prephenate dehydratase K04518 - 4.2.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000002299 256.0
DYD3_k127_2561107_6 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000003549 261.0
DYD3_k127_2561107_7 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K02564 - 3.5.99.6 0.00000000000000000000000000000000000000000006572 169.0
DYD3_k127_2561107_8 PFAM Prephenate dehydrogenase K04517 - 1.3.1.12 0.00000000000000000000000000000000000002431 164.0
DYD3_k127_2593369_0 Catalyzes the synthesis of activated sulfate K00958 - 2.7.7.4 4.332e-270 842.0
DYD3_k127_2593369_1 Glycosyl transferase 4-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 372.0
DYD3_k127_2593369_2 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003898 338.0
DYD3_k127_2593369_3 Inositol monophosphatase family K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000007709 198.0
DYD3_k127_2593369_4 Sulfotransferase family - - - 0.000000000000000000000000000000000364 143.0
DYD3_k127_2593369_5 Glycosyltransferase - - - 0.000000000000000000000000000004905 133.0
DYD3_k127_2593369_6 Sulfotransferase family - - - 0.00000000000000000000003107 110.0
DYD3_k127_260024_0 PFAM ABC transporter transmembrane K06147 - - 1.421e-266 832.0
DYD3_k127_260024_1 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007737 484.0
DYD3_k127_260024_10 Domain of unknown function (DUF4198) - - - 0.000000000000000000000000000000000000000000000000000001479 201.0
DYD3_k127_260024_11 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 - 1.6.1.2 0.000000000000000000000000000003507 121.0
DYD3_k127_260024_12 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000000000000000000001433 130.0
DYD3_k127_260024_13 pyridoxamine 5-phosphate - - - 0.0000002185 62.0
DYD3_k127_260024_14 Spore Coat - - - 0.00005622 56.0
DYD3_k127_260024_2 PFAM Aminotransferase class-III K01845 - 5.4.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007348 450.0
DYD3_k127_260024_3 Divalent cation transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008313 445.0
DYD3_k127_260024_4 Putative citrate transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002307 431.0
DYD3_k127_260024_5 helix_turn_helix gluconate operon transcriptional repressor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002485 346.0
DYD3_k127_260024_6 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003888 334.0
DYD3_k127_260024_7 Saccharopine dehydrogenase C-terminal domain K00290 - 1.5.1.7 0.0000000000000000000000000000000000000000000000000000000002798 215.0
DYD3_k127_260024_8 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000175 200.0
DYD3_k127_260024_9 Calcineurin-like phosphoesterase K14379 - 3.1.3.2 0.0000000000000000000000000000000000000000000000000000005297 214.0
DYD3_k127_2690339_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K11177 - 1.17.1.4 5.534e-268 853.0
DYD3_k127_2690339_1 SMART Adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005617 349.0
DYD3_k127_2690339_2 CO dehydrogenase flavoprotein C-terminal domain K11178 - 1.17.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007223 318.0
DYD3_k127_2690339_3 Protein tyrosine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000009354 220.0
DYD3_k127_2690339_4 TonB dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000005668 198.0
DYD3_k127_2690339_5 Dna alkylation repair - - - 0.0000000000000000000000000000000000000000000006336 171.0
DYD3_k127_2690339_6 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000001865 98.0
DYD3_k127_2690339_7 - - - - 0.000000000000000000399 93.0
DYD3_k127_270641_0 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007093 552.0
DYD3_k127_270641_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003921 513.0
DYD3_k127_270641_10 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.00000000000000000000003512 106.0
DYD3_k127_270641_2 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003092 377.0
DYD3_k127_270641_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002113 377.0
DYD3_k127_270641_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003616 344.0
DYD3_k127_270641_5 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus K00341 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 329.0
DYD3_k127_270641_6 D-aminopeptidase K16203 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002774 287.0
DYD3_k127_270641_7 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000001891 218.0
DYD3_k127_270641_8 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 K00330 - 1.6.5.3 0.000000000000000000000000000000000001044 142.0
DYD3_k127_270641_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0030964,GO:0032991,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:0098797,GO:0098803,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1990204 1.6.5.3 0.000000000000000000000000001837 122.0
DYD3_k127_2761031_0 Aldehyde dehydrogenase family K00138 - - 8.388e-240 749.0
DYD3_k127_2761031_1 Two component, sigma54 specific, transcriptional regulator, Fis family K02481 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 396.0
DYD3_k127_2761031_10 cytochrome c oxidase subunit II K02275 - 1.9.3.1 0.0000000000000001013 83.0
DYD3_k127_2761031_11 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000006896 80.0
DYD3_k127_2761031_13 - - - - 0.000002484 58.0
DYD3_k127_2761031_14 - - - - 0.00009515 50.0
DYD3_k127_2761031_16 Phosphate-selective porin O and P - - - 0.0008148 52.0
DYD3_k127_2761031_2 Allophanate hydrolase subunit 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003566 373.0
DYD3_k127_2761031_3 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007314 338.0
DYD3_k127_2761031_4 serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 321.0
DYD3_k127_2761031_5 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007867 315.0
DYD3_k127_2761031_6 PFAM LemA family protein K03744 - - 0.000000000000000000000000000000000000000000000000000000000000007928 223.0
DYD3_k127_2761031_7 Belongs to the UPF0271 (lamB) family K07160 - - 0.00000000000000000000000000000000000000000000000000000000000001799 222.0
DYD3_k127_2761031_8 GAF domain - - - 0.00000000000000000000000000000000001407 154.0
DYD3_k127_2761031_9 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000655 132.0
DYD3_k127_278690_0 cyclic 2,3-diphosphoglycerate synthetase activity K05716 - - 6.303e-195 617.0
DYD3_k127_278690_1 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 623.0
DYD3_k127_278690_10 Tetratricopeptide repeat - - - 0.0001444 49.0
DYD3_k127_278690_2 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001435 486.0
DYD3_k127_278690_3 membrane protein, TerC K05794 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004703 415.0
DYD3_k127_278690_4 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611,K09065,K13252 - 2.1.3.3,2.1.3.6,2.1.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006887 364.0
DYD3_k127_278690_5 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005199 281.0
DYD3_k127_278690_6 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000149 254.0
DYD3_k127_278690_7 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000002229 249.0
DYD3_k127_278690_9 Predicted membrane protein (DUF2339) - - - 0.00000000000000000000000000000001493 147.0
DYD3_k127_2816265_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 1.867e-284 880.0
DYD3_k127_2816265_1 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008668 379.0
DYD3_k127_2816265_2 ABC-type Zn2 transport system, periplasmic component surface adhesin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009803 391.0
DYD3_k127_2816265_3 protein SCO1 SenC PrrC involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001469 268.0
DYD3_k127_2816265_4 PFAM cytochrome c oxidase, subunit III K02276 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000511 238.0
DYD3_k127_2816265_5 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000000000000000000000000000000000000006724 237.0
DYD3_k127_2816265_6 TIGRFAM Caa(3)-type oxidase, subunit IV K02277 - 1.9.3.1 0.00000000000000000006551 97.0
DYD3_k127_2816265_7 Protein of unknown function (DUF3341) - - - 0.00000000009533 63.0
DYD3_k127_2816265_8 - - - - 0.00000001035 68.0
DYD3_k127_2841651_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 1.9e-242 769.0
DYD3_k127_2841651_1 peptidyl-prolyl isomerase K03769 - 5.2.1.8 0.0000000000000000002697 100.0
DYD3_k127_2841651_2 Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins K03769,K07533 - 5.2.1.8 0.00000000000000003228 94.0
DYD3_k127_2841651_3 6-O-methylguanine DNA methyltransferase, DNA binding domain K07443 - - 0.000000000000002391 78.0
DYD3_k127_2849431_0 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006011 335.0
DYD3_k127_2849431_1 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008983 321.0
DYD3_k127_2849431_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K15727 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009688 302.0
DYD3_k127_2849431_3 COGs COG0577 ABC-type antimicrobial peptide transport system permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004818 252.0
DYD3_k127_2849431_4 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000141 246.0
DYD3_k127_2849431_5 TIGRFAM diguanylate cyclase K02488 GO:0003674,GO:0005488,GO:0005515,GO:0042802 2.7.7.65 0.0000000000000000000000000000000000000000000000000000009997 210.0
DYD3_k127_2849431_6 geranylgeranyl reductase - - - 0.0000000000000000000000000000000005403 136.0
DYD3_k127_2849431_7 HlyD family secretion protein K02005 - - 0.0008038 46.0
DYD3_k127_2860159_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009524 471.0
DYD3_k127_2860159_1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00322 - 1.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005511 401.0
DYD3_k127_2860159_2 Aminotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005 305.0
DYD3_k127_2860159_3 Belongs to the peptidase S51 family K05995 GO:0003674,GO:0003824,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0071704,GO:0140096,GO:1901564 3.4.13.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006937 280.0
DYD3_k127_2860159_4 formylmethanofuran dehydrogenase subunit C K00202 - 1.2.7.12 0.0000000000003774 72.0
DYD3_k127_287064_0 oligopeptide transporter, OPT family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008423 612.0
DYD3_k127_287064_1 Two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002591 450.0
DYD3_k127_287064_2 Heat shock 70 kDa protein K04043 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003082 271.0
DYD3_k127_287064_3 signal transduction histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009899 280.0
DYD3_k127_287064_4 dTDP biosynthetic process K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.00000000000000000000000000000000000000000000000000000000003701 231.0
DYD3_k127_2894842_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 1.344e-194 625.0
DYD3_k127_2894842_1 PFAM tRNA synthetase, class II (G, H, P and S) K01892 - 6.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 432.0
DYD3_k127_2894842_10 peptidase - - - 0.00000000000000000000000000000000000219 159.0
DYD3_k127_2894842_11 Trehalose utilisation - - - 0.0000000000000000000000000000000008474 145.0
DYD3_k127_2894842_12 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.00000000000000000000000000002186 123.0
DYD3_k127_2894842_13 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.00000000000000000000003071 116.0
DYD3_k127_2894842_14 Outer membrane protein, OMP85 family K07277 - - 0.0000000002058 73.0
DYD3_k127_2894842_15 outer membrane efflux protein K03287 - - 0.00000007721 63.0
DYD3_k127_2894842_16 ATPase involved in DNA repair - - - 0.000005261 53.0
DYD3_k127_2894842_2 PFAM PhoH family protein K06217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006108 376.0
DYD3_k127_2894842_3 PFAM ABC transporter K01990,K09695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001632 359.0
DYD3_k127_2894842_4 PFAM ABC-2 type transporter K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 323.0
DYD3_k127_2894842_5 transport, permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002415 335.0
DYD3_k127_2894842_7 ATP ADP translocase K03301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003961 277.0
DYD3_k127_2894842_8 Bacterial transferase hexapeptide (six repeats) - - - 0.000000000000000000000000000000000000000000000000000004684 195.0
DYD3_k127_2894842_9 Protein of Unknown function (DUF2784) - - - 0.00000000000000000000000000000000000000003909 155.0
DYD3_k127_2900820_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 1.626e-265 837.0
DYD3_k127_2900820_1 MotA TolQ ExbB proton channel K03561,K03562 - - 0.000000000000000000000000000000000000000000000000000000000000002618 224.0
DYD3_k127_2900820_2 Ras family - - - 0.000000000000000000000000000000000000000000000000000004959 203.0
DYD3_k127_2900820_3 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.0000000000000000000000000000000000000002563 154.0
DYD3_k127_2900820_4 PFAM Endoribonuclease L-PSP K09022 - 3.5.99.10 0.0000000000000000000000000000000001733 153.0
DYD3_k127_2900820_5 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.00000000000000000000001706 101.0
DYD3_k127_2900820_6 PFAM Biopolymer transport protein ExbD TolR K03559,K03560 - - 0.0000000000000000000003362 103.0
DYD3_k127_2900820_7 Biopolymer transport protein ExbD/TolR K03560 - - 0.000000000000000000001009 100.0
DYD3_k127_2900820_8 TPR Domain containing protein - - - 0.000004097 58.0
DYD3_k127_2912725_0 PFAM Glycosyl transferase, family K00756 - 2.4.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006346 485.0
DYD3_k127_2912725_1 Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family K03317 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005432 415.0
DYD3_k127_2912725_2 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K00772,K03783 - 2.4.2.1,2.4.2.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000693 311.0
DYD3_k127_2912725_3 WYL domain - - - 0.00000000000000000000000000000000000000000000000000000000001051 227.0
DYD3_k127_2912725_4 Cytidine and deoxycytidylate deaminase zinc-binding region K01489 - 3.5.4.5 0.00000000000000000000000000000000000001732 154.0
DYD3_k127_2912725_5 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.00000000000000000000000000007778 130.0
DYD3_k127_2912725_6 Amidohydrolase family K12960 - 3.5.4.28,3.5.4.31 0.000000000000000000000001519 113.0
DYD3_k127_2912725_7 - - - - 0.000000000001287 80.0
DYD3_k127_2927789_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1259.0
DYD3_k127_2927789_1 Tricorn protease homolog K08676 - - 0.0 1084.0
DYD3_k127_2927789_10 Polyphosphate kinase 2 (PPK2) K22468 - 2.7.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000725 260.0
DYD3_k127_2927789_11 polyphosphate kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000008858 220.0
DYD3_k127_2927789_12 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585,K07799 - - 0.000000000000000000000000000000000000000000000000000005549 207.0
DYD3_k127_2927789_13 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000001545 193.0
DYD3_k127_2927789_14 lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000000000002445 150.0
DYD3_k127_2927789_15 von Willebrand factor, type A - - - 0.00000000000000000000000001028 126.0
DYD3_k127_2927789_16 oxidoreductase activity - - - 0.000001089 63.0
DYD3_k127_2927789_17 zinc-ribbon domain - - - 0.000002147 57.0
DYD3_k127_2927789_2 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1080.0
DYD3_k127_2927789_3 PFAM glycosyl transferase, family 35 K00688 - 2.4.1.1 3.372e-225 720.0
DYD3_k127_2927789_4 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 1.999e-224 712.0
DYD3_k127_2927789_5 Type II/IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005088 418.0
DYD3_k127_2927789_6 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 389.0
DYD3_k127_2927789_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003262 373.0
DYD3_k127_2927789_8 spermidine synthase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004727 335.0
DYD3_k127_2927789_9 PFAM Chlorite dismutase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007366 305.0
DYD3_k127_293995_0 WYL domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007423 381.0
DYD3_k127_293995_1 Methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002316 300.0
DYD3_k127_293995_2 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000007915 222.0
DYD3_k127_293995_3 Asp/Glu/Hydantoin racemase K01779 - 5.1.1.13 0.0000000000000000000000000000000000000000000001812 177.0
DYD3_k127_293995_6 HWE histidine kinase - - - 0.0000000001161 71.0
DYD3_k127_293995_7 FOG GGDEF domain - - - 0.000001602 58.0
DYD3_k127_293995_8 Domain of unknown function (DUF4440) - - - 0.00000791 55.0
DYD3_k127_293995_9 GAF modulated sigma54 specific transcriptional regulator, Fis family K21405 - - 0.00001237 55.0
DYD3_k127_2940461_0 lysine 2,3-aminomutase K01843 - 5.4.3.2 2.074e-231 737.0
DYD3_k127_2940461_1 PFAM Type II secretion system protein E K02454 - - 4.194e-211 681.0
DYD3_k127_2940461_10 Type ii and iii secretion system protein K02453 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003143 365.0
DYD3_k127_2940461_11 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161,K11381,K21416 - 1.2.4.1,1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003243 338.0
DYD3_k127_2940461_12 Male sterility protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002484 298.0
DYD3_k127_2940461_13 Protein of unknown function (DUF1343) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003652 252.0
DYD3_k127_2940461_14 Glycosyl hydrolase-like 10 - - - 0.0000000000000000000000000000000000332 148.0
DYD3_k127_2940461_15 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.00000000000000000000000006511 118.0
DYD3_k127_2940461_16 SMART protein phosphatase 2C domain protein - - - 0.0000000000004556 78.0
DYD3_k127_2940461_17 DDE superfamily endonuclease - - - 0.0000000001709 61.0
DYD3_k127_2940461_2 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 7.556e-198 663.0
DYD3_k127_2940461_3 Phosphofructokinase - - - 3.947e-194 633.0
DYD3_k127_2940461_4 Sugar (and other) transporter K08369 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023 515.0
DYD3_k127_2940461_5 dihydrolipoamide dehydrogenase K00382 - 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005317 465.0
DYD3_k127_2940461_6 Transketolase, pyrimidine binding domain K00167 - 1.2.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001442 453.0
DYD3_k127_2940461_7 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K00658 - 2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 384.0
DYD3_k127_2940461_8 Sodium:solute symporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000556 380.0
DYD3_k127_2940461_9 Transporter associated domain K03699,K06189 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006282 362.0
DYD3_k127_2940894_0 Amidase K01426 - 3.5.1.4 4.992e-213 675.0
DYD3_k127_2940894_1 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K12251 - 3.5.1.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 434.0
DYD3_k127_2940894_10 DinB family - - - 0.00000000000000000000000000000000000000000166 161.0
DYD3_k127_2940894_11 response to oxidative stress K04063 - - 0.00000000000000000000000000000000005305 143.0
DYD3_k127_2940894_12 catechol 1,2-dioxygenase - - - 0.0000000000000001116 87.0
DYD3_k127_2940894_13 PIN domain - - - 0.000000000001429 73.0
DYD3_k127_2940894_14 DDE superfamily endonuclease - - - 0.0000000001709 61.0
DYD3_k127_2940894_15 Dioxygenase - - - 0.0000007004 55.0
DYD3_k127_2940894_16 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.000006211 52.0
DYD3_k127_2940894_2 PFAM aminotransferase class V - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004062 414.0
DYD3_k127_2940894_3 Belongs to the agmatine deiminase family K10536 - 3.5.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005602 417.0
DYD3_k127_2940894_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001759 378.0
DYD3_k127_2940894_5 GDSL-like Lipase/Acylhydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001469 300.0
DYD3_k127_2940894_6 EAL domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 311.0
DYD3_k127_2940894_7 metal-dependent hydrolase with the TIM-barrel fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000358 287.0
DYD3_k127_2940894_8 Forkhead associated domain - - - 0.0000000000000000000000000000000000000000000000000000000000000007978 233.0
DYD3_k127_2940894_9 Cupin domain - - - 0.000000000000000000000000000000000000000000000000001156 184.0
DYD3_k127_2941046_0 Cell shape determining protein MreB Mrl - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002548 318.0
DYD3_k127_2941046_1 N-Acetylmuramoyl-L-alanine amidase K11066,K12287 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000008008 233.0
DYD3_k127_2941046_2 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000001533 122.0
DYD3_k127_2941046_3 DDE superfamily endonuclease - - - 0.0000000001709 61.0
DYD3_k127_2941433_0 Ankyrin repeats (many copies) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007538 281.0
DYD3_k127_2941433_1 TonB-dependent Receptor Plug Domain K02014,K16092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001195 298.0
DYD3_k127_2941433_10 SnoaL-like polyketide cyclase - - - 0.000000000000000000000000000000000001017 145.0
DYD3_k127_2941433_11 Acetyltransferase (GNAT) domain - - - 0.000000000000006484 80.0
DYD3_k127_2941433_12 DDE superfamily endonuclease - - - 0.0000000001709 61.0
DYD3_k127_2941433_13 Acetyltransferase (GNAT) domain - - - 0.0000004069 63.0
DYD3_k127_2941433_2 Sugar-transfer associated ATP-grasp - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002347 261.0
DYD3_k127_2941433_3 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.0000000000000000000000000000000000000000000000000000000000000000006581 251.0
DYD3_k127_2941433_4 Iron-binding zinc finger CDGSH type - - - 0.0000000000000000000000000000000000000000000000000000000005901 209.0
DYD3_k127_2941433_5 lactoylglutathione lyase activity - - - 0.000000000000000000000000000000000000000000000000000000004765 206.0
DYD3_k127_2941433_6 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000000000003359 196.0
DYD3_k127_2941433_7 ketosteroid isomerase - - - 0.000000000000000000000000000000000000000000000000009727 182.0
DYD3_k127_2941433_8 Abc transporter K02013 - 3.6.3.34 0.00000000000000000000000000000000000000000000000003211 188.0
DYD3_k127_2941433_9 MOSC domain - - - 0.000000000000000000000000000000000000000007817 158.0
DYD3_k127_2945069_0 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 462.0
DYD3_k127_2945069_1 Saccharopine dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 373.0
DYD3_k127_2945069_10 PFAM N-acetylneuraminic acid synthase K01654,K15898,K18430 - 2.5.1.101,2.5.1.56,2.5.1.97 0.000000000000000000000000000000000000000000000976 178.0
DYD3_k127_2945069_11 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000003899 155.0
DYD3_k127_2945069_12 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0000000000000000000000000000000000000001547 174.0
DYD3_k127_2945069_13 Glycosyl transferase, family 9 K02843,K02849 - - 0.000000000000000000000000000000000000002735 162.0
DYD3_k127_2945069_14 Acylneuraminate cytidylyltransferase K00983 - 2.7.7.43 0.000000000000000000001352 109.0
DYD3_k127_2945069_15 Bacterial membrane protein, YfhO - - - 0.0000000000000000002154 104.0
DYD3_k127_2945069_16 Psort location CytoplasmicMembrane, score - - - 0.0000000019 72.0
DYD3_k127_2945069_17 UDP-N-acetylglucosamine 2-epimerase activity - - - 0.000000139 65.0
DYD3_k127_2945069_2 aromatic amino acid beta-eliminating lyase threonine aldolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007523 368.0
DYD3_k127_2945069_3 PFAM glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006011 353.0
DYD3_k127_2945069_4 PFAM glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000253 329.0
DYD3_k127_2945069_5 L-lysine 6-monooxygenase (NADPH-requiring) K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004275 325.0
DYD3_k127_2945069_6 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002817 297.0
DYD3_k127_2945069_7 PFAM N-acetylneuraminic acid synthase K01654,K15898,K18430 - 2.5.1.101,2.5.1.56,2.5.1.97 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001511 307.0
DYD3_k127_2945069_8 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003183 250.0
DYD3_k127_2945069_9 Cytidylyltransferase K07257 - - 0.00000000000000000000000000000000000000000000002239 192.0
DYD3_k127_3086852_0 ATPase family associated with various cellular activities (AAA) - - - 1.782e-262 817.0
DYD3_k127_3086852_1 von Willebrand factor (vWF) type A domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006608 607.0
DYD3_k127_3086852_2 AAA domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002499 335.0
DYD3_k127_3086852_4 branched-chain-amino-acid transaminase activity K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000001804 194.0
DYD3_k127_3094692_0 phosphoserine phosphatase activity K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000008983 237.0
DYD3_k127_3094692_1 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000005043 182.0
DYD3_k127_3094692_2 S1/P1 Nuclease - - - 0.0000000000000000000000000000000000000001333 174.0
DYD3_k127_3094692_3 Amidohydrolase family - - - 0.0000000000000004496 92.0
DYD3_k127_3094692_4 General secretion pathway protein C K02452 - - 0.00000002512 63.0
DYD3_k127_3115768_0 HELICc2 K03722 GO:0003674,GO:0003824,GO:0004386,GO:0006139,GO:0006259,GO:0006281,GO:0006301,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008026,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0070035,GO:0071704,GO:0090304,GO:1901360 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000001138 222.0
DYD3_k127_3115768_1 5TM C-terminal transporter carbon starvation CstA K06200 - - 0.000000000000000000000000000000000000000000000000000000000000684 214.0
DYD3_k127_3115768_2 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000000000000000000000000000000000000000000000000001241 194.0
DYD3_k127_3115768_3 DivIVA protein K04074 - - 0.0000000000007528 81.0
DYD3_k127_3115768_4 TPR repeat - - - 0.00001194 57.0
DYD3_k127_3115768_5 Carboxypeptidase regulatory-like domain - - - 0.0006342 51.0
DYD3_k127_3125823_0 UvrD/REP helicase N-terminal domain K03657,K07465 - 3.6.4.12 2.018e-271 865.0
DYD3_k127_3125823_1 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070039,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.185 0.0000000000000000000000000000000000000000000000000000000000000002295 241.0
DYD3_k127_3125823_10 - - - - 0.00005036 45.0
DYD3_k127_3125823_2 D-Ala-D-Ala carboxypeptidase 3 (S13) family K07259 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000009443 231.0
DYD3_k127_3125823_3 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.00000000000000000000000000000000000000000000000000007929 197.0
DYD3_k127_3125823_4 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.000000000000000000000000000000000000000000000000006119 187.0
DYD3_k127_3125823_5 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0050518,GO:0070567 2.7.7.60 0.0000000000000000000000000000000000000000004453 170.0
DYD3_k127_3125823_6 RmuC family K09760 - - 0.00000000000000000000000000000000000001382 157.0
DYD3_k127_3125823_7 B3/4 domain - - - 0.00000000000000000000000000000000000003529 151.0
DYD3_k127_3125823_8 - - - - 0.0000000000000000000000143 104.0
DYD3_k127_3125823_9 - - - - 0.00001448 49.0
DYD3_k127_3148314_0 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004556 527.0
DYD3_k127_3148314_1 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000859 477.0
DYD3_k127_3148314_10 binds to the 23S rRNA K02939 - - 0.00000000000000000000000000000000000008563 159.0
DYD3_k127_3148314_11 TIGRFAM geranylgeranyl reductase - - - 0.0000000000000000000000000000000009663 142.0
DYD3_k127_3148314_12 Could be involved in septation K06412 - - 0.0000000000000000000000000006116 115.0
DYD3_k127_3148314_13 Ribosomal protein S18 K02963 - - 0.000000000000000000000000008558 118.0
DYD3_k127_3148314_14 O-Antigen ligase K18814 - - 0.0000000000000000000000002714 121.0
DYD3_k127_3148314_15 Psort location CytoplasmicMembrane, score - - - 0.00000000000000000000001907 113.0
DYD3_k127_3148314_16 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.00000000000000000000003572 104.0
DYD3_k127_3148314_17 Trm112p-like protein K09791 - - 0.000000000000000102 81.0
DYD3_k127_3148314_18 Predicted membrane protein (DUF2232) - - - 0.000004726 58.0
DYD3_k127_3148314_2 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003137 393.0
DYD3_k127_3148314_3 pfkB family carbohydrate kinase K03272 - 2.7.1.167,2.7.7.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006566 286.0
DYD3_k127_3148314_4 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000002863 254.0
DYD3_k127_3148314_5 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000003434 252.0
DYD3_k127_3148314_6 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.000000000000000000000000000000000000000000000000004062 190.0
DYD3_k127_3148314_7 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.0000000000000000000000000000000000000000000001286 177.0
DYD3_k127_3148314_8 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.000000000000000000000000000000000000000000001021 183.0
DYD3_k127_3148314_9 arylsulfatase activity - - - 0.000000000000000000000000000000000000000662 172.0
DYD3_k127_3149053_0 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004999 621.0
DYD3_k127_3149053_1 HflC and HflK could encode or regulate a protease K04088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001488 371.0
DYD3_k127_3149053_2 HflC and HflK could regulate a protease K04087 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005272 385.0
DYD3_k127_3149053_3 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000008857 244.0
DYD3_k127_3149053_4 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000000000000000000000000435 215.0
DYD3_k127_3149053_5 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000008382 216.0
DYD3_k127_3169781_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046,K13797 GO:0000428,GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030880,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.6 0.0 1721.0
DYD3_k127_3169781_1 Flavin containing amine oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004285 488.0
DYD3_k127_3169781_2 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007532 406.0
DYD3_k127_3169781_3 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000057 107.0
DYD3_k127_3169781_4 FAD dependent oxidoreductase - - - 0.0000000000000000001219 96.0
DYD3_k127_3172466_0 Aminotransferase class-III K01845 - 5.4.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 549.0
DYD3_k127_3172466_1 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008605 387.0
DYD3_k127_3172466_2 Belongs to the ALAD family K01698 - 4.2.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006109 340.0
DYD3_k127_3172466_3 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.00000000000000000000000000000000000000000000000000001427 196.0
DYD3_k127_3172466_4 Glycosyl transferase family 39 - - - 0.000000000000000000000000000000008549 147.0
DYD3_k127_3186254_0 Insulinase (Peptidase family M16) K07263 - - 0.0 1202.0
DYD3_k127_3186254_1 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001492 490.0
DYD3_k127_3186254_10 endonuclease activity K07451 - - 0.00000000000000000000000000000000000000000000476 183.0
DYD3_k127_3186254_12 Belongs to the sigma-70 factor family. ECF subfamily K03088 GO:0000988,GO:0000990,GO:0003674,GO:0005575,GO:0005618,GO:0005623,GO:0006355,GO:0006950,GO:0006979,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0016987,GO:0019219,GO:0019222,GO:0030312,GO:0031323,GO:0031326,GO:0033554,GO:0034605,GO:0043254,GO:0044087,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051252,GO:0051409,GO:0051716,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2000142,GO:2001141 - 0.0000000000000000000000000000000000000001079 158.0
DYD3_k127_3186254_13 Glycosyltransferase family 87 - - - 0.0000000000000000000000000000000000000006289 166.0
DYD3_k127_3186254_14 Polymer-forming cytoskeletal - - - 0.000000000000000000000000002421 117.0
DYD3_k127_3186254_15 Putative lumazine-binding - - - 0.000000000000000000000002726 108.0
DYD3_k127_3186254_17 Two component transcriptional regulator, LuxR family - - - 0.0000000000000005664 85.0
DYD3_k127_3186254_19 - - - - 0.0000000000351 68.0
DYD3_k127_3186254_2 Belongs to the LDH MDH superfamily K00016 - 1.1.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001744 412.0
DYD3_k127_3186254_21 Putative zinc-finger - - - 0.00001384 56.0
DYD3_k127_3186254_3 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989,K02428 - 2.7.7.56,3.6.1.66 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002246 323.0
DYD3_k127_3186254_4 ABC-type dipeptide transport system periplasmic component - - - 0.000000000000000000000000000000000000000000000000000000000000006912 237.0
DYD3_k127_3186254_5 PFAM regulatory protein LuxR - - - 0.00000000000000000000000000000000000000000000000000000000000002882 243.0
DYD3_k127_3186254_6 Transglycosylase SLT domain K08309 - - 0.00000000000000000000000000000000000000000000000000000004928 220.0
DYD3_k127_3186254_7 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000001196 221.0
DYD3_k127_3186254_8 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.000000000000000000000000000000000000000000000000000001005 202.0
DYD3_k127_3186254_9 - - - - 0.0000000000000000000000000000000000000000000025 168.0
DYD3_k127_322054_0 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003546 511.0
DYD3_k127_322054_1 PFAM NAD dependent epimerase dehydratase family K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008329 345.0
DYD3_k127_322054_2 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000001116 151.0
DYD3_k127_322054_3 - - - - 0.000000000000007473 80.0
DYD3_k127_322054_4 heat shock protein binding - - - 0.00000005295 57.0
DYD3_k127_322054_5 transposase activity K07483,K07497 - - 0.0002817 44.0
DYD3_k127_3229056_0 Prolyl oligopeptidase K01322 - 3.4.21.26 2.689e-295 921.0
DYD3_k127_3229056_1 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003995 472.0
DYD3_k127_3229056_2 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005845 411.0
DYD3_k127_3229056_3 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005831 381.0
DYD3_k127_3229056_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004613 346.0
DYD3_k127_3229056_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002734 305.0
DYD3_k127_3229056_6 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784,K12448 - 5.1.3.2,5.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006102 280.0
DYD3_k127_3229056_7 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000004759 258.0
DYD3_k127_3229056_8 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.00000000000000000000000000000000000000000000000000000000000000002455 239.0
DYD3_k127_3229056_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000001484 193.0
DYD3_k127_3230882_0 HD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009073 514.0
DYD3_k127_3230882_1 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000058 376.0
DYD3_k127_3230882_2 Aldehyde dehydrogenase family K22445 - 1.2.99.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000001808 276.0
DYD3_k127_3230882_3 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000244 248.0
DYD3_k127_3230882_4 arylsulfatase activity - - - 0.00000000000000000000000000000000000000000000000000000002605 221.0
DYD3_k127_3230882_5 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.00000000000000000000000000000000000008234 162.0
DYD3_k127_3230882_6 PFAM Haloacid dehalogenase domain protein hydrolase K01091 - 3.1.3.18 0.0000000000000000000000000000000000008715 157.0
DYD3_k127_3230882_7 SnoaL-like domain - - - 0.00000000000000000000000003211 112.0
DYD3_k127_3230882_8 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000002374 92.0
DYD3_k127_3234242_0 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001523 437.0
DYD3_k127_3234242_1 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962,K01963 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005097 383.0
DYD3_k127_3234242_2 PFAM ABC transporter related K06861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002843 334.0
DYD3_k127_3234242_3 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000027 328.0
DYD3_k127_3234242_4 involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K09774 - - 0.00000000000000000004654 107.0
DYD3_k127_3234242_5 DNA polymerase alpha chain like domain K02337 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944 2.7.7.7 0.0000000005228 66.0
DYD3_k127_3236471_0 5TM C-terminal transporter carbon starvation CstA K06200 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008999 423.0
DYD3_k127_3236471_1 Flavin containing amine oxidoreductase K02291 - 2.5.1.32,2.5.1.99 0.00000000000000000000000000000000000000000000000000000000004617 230.0
DYD3_k127_3236471_2 Squalene synthase HpnD K02291 - 2.5.1.32,2.5.1.99 0.000000000000000000000000000000000000000000000000000000001545 222.0
DYD3_k127_3236471_3 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant - - - 0.000000000000000000000000000000000002182 142.0
DYD3_k127_3236471_4 - - - - 0.000000000000000000000000000000000006007 157.0
DYD3_k127_3236471_5 belongs to the bacterial solute-binding protein 3 family K10013,K10014 - - 0.000000000000000193 92.0
DYD3_k127_3249852_0 Nucleotidyl transferase K00975 - 2.7.7.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000049 443.0
DYD3_k127_3249852_1 DinB superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001557 269.0
DYD3_k127_3249852_2 Sulfatase - - - 0.000000000000000000000000000000000000000000000000003209 206.0
DYD3_k127_3249852_3 Dihydrofolate reductase - - - 0.000000000000000000000000000000000000001696 152.0
DYD3_k127_3249852_4 lactoylglutathione lyase activity - - - 0.0000000000000000000000003251 116.0
DYD3_k127_3249852_5 PDZ DHR GLGF domain protein - - - 0.00000000000000000000001119 113.0
DYD3_k127_3249852_6 protein involved in cysteine biosynthesis K06203 - - 0.00000000000004718 81.0
DYD3_k127_3253073_0 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000172 421.0
DYD3_k127_3253073_1 Patatin-like phospholipase K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004386 297.0
DYD3_k127_3253073_2 PFAM Cold-shock protein, DNA-binding K03704 - - 0.000000000000000000000000003077 113.0
DYD3_k127_3253073_3 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.00000000000000000001657 103.0
DYD3_k127_3253073_4 Domain of unknown function (DUF4136) - - - 0.000000002626 70.0
DYD3_k127_3311125_0 Oxidoreductase domain protein - - - 3.458e-202 639.0
DYD3_k127_3311125_1 Major facilitator Superfamily K05820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001387 515.0
DYD3_k127_3311125_2 Respiratory-chain NADH dehydrogenase, 49 Kd subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005317 489.0
DYD3_k127_3311125_3 plastoquinone (Complex I) K12141 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007644 360.0
DYD3_k127_3311125_4 PFAM oxidoreductase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000205 282.0
DYD3_k127_3311125_5 NADH dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002248 286.0
DYD3_k127_3311125_6 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001703 254.0
DYD3_k127_3311125_7 Hydrogenase 4 membrane K12140 - - 0.0000000000000000000000000000000000000000001468 167.0
DYD3_k127_3311125_8 Proton-conducting membrane transporter K12137 - - 0.0000000002863 62.0
DYD3_k127_3311125_9 Cytochrome c K00406,K12263 - - 0.00000001074 62.0
DYD3_k127_3311999_0 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases K09461 - 1.14.13.40 2.552e-268 845.0
DYD3_k127_3311999_1 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000177 288.0
DYD3_k127_3311999_2 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005875 254.0
DYD3_k127_3311999_3 Response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000002594 209.0
DYD3_k127_3311999_4 Redoxin K02199 - - 0.0000000000000000000000000000000000000001948 156.0
DYD3_k127_3311999_5 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 0.000000000000000000000000000000000001404 140.0
DYD3_k127_3311999_6 subunit of a heme lyase K02200 - - 0.00000000000000000002033 104.0
DYD3_k127_3311999_7 Tetratricopeptide repeat - - - 0.0008473 52.0
DYD3_k127_3330025_0 Oligoendopeptidase f - - - 2.716e-290 906.0
DYD3_k127_3330025_1 PQQ-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003208 438.0
DYD3_k127_3330025_10 helix_turn_helix, Lux Regulon - - - 0.000000000000002502 90.0
DYD3_k127_3330025_11 HEAT repeat - - - 0.0000000001024 70.0
DYD3_k127_3330025_2 Belongs to the thiolase family K00626,K00632 - 2.3.1.16,2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 387.0
DYD3_k127_3330025_3 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007974 343.0
DYD3_k127_3330025_4 Hpt domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007698 323.0
DYD3_k127_3330025_5 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009589 255.0
DYD3_k127_3330025_6 protein histidine kinase activity - - - 0.00000000000000000000000000000000000000000000000000009247 199.0
DYD3_k127_3330025_7 Zn peptidase - - - 0.000000000000000000000000000000000000002145 162.0
DYD3_k127_3330025_8 COG0784 FOG CheY-like receiver - - - 0.000000000000000000000000000003859 138.0
DYD3_k127_3330025_9 PFAM response regulator receiver - - - 0.000000000000000000811 94.0
DYD3_k127_3345446_0 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 8.751e-297 937.0
DYD3_k127_3345446_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903,K14067 - 6.2.1.5,6.2.1.9 1.765e-197 626.0
DYD3_k127_3345446_2 Serine-pyruvate aminotransferase archaeal aspartate aminotransferase K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004067 536.0
DYD3_k127_3345446_3 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902,K08692 - 6.2.1.5,6.2.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002967 459.0
DYD3_k127_3345446_4 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 435.0
DYD3_k127_3345446_5 HpcH/HpaI aldolase/citrate lyase family K01644,K08691 - 4.1.3.24,4.1.3.25,4.1.3.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002146 436.0
DYD3_k127_3345446_6 BAAT / Acyl-CoA thioester hydrolase C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 407.0
DYD3_k127_3345446_7 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00015,K00050,K00090 - 1.1.1.215,1.1.1.26,1.1.1.79,1.1.1.81 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008655 358.0
DYD3_k127_3345446_8 Outer membrane protein assembly complex, YaeT protein K07277 - - 0.00000000000000000004846 106.0
DYD3_k127_3369238_0 PFAM aminotransferase, class I K10907 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002632 304.0
DYD3_k127_3369238_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00263 - 1.4.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000004233 258.0
DYD3_k127_3369238_2 PFAM aminotransferase, class I K10907 - - 0.0000000000000000000000000000000000000000000000000000000000002203 214.0
DYD3_k127_3369238_3 Ami_3 K01448 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000002254 207.0
DYD3_k127_3369238_4 - - - - 0.000000000000000000000000000003502 124.0
DYD3_k127_3369238_5 Sporulation and spore germination - - - 0.0000000000000000000000001961 122.0
DYD3_k127_3369238_6 Belongs to the iron ascorbate-dependent oxidoreductase family - - - 0.0000000000036 72.0
DYD3_k127_3378913_0 class II (D K K01893 - 6.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005561 557.0
DYD3_k127_3378913_1 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000007835 248.0
DYD3_k127_3378913_2 Glycosyl transferase family 1 - - - 0.00000000000000000000000000000000000000000000000000000000000001787 229.0
DYD3_k127_3378913_3 phosphotransferase related to Ser Thr protein kinases K07102 - 2.7.1.221 0.00000000000000000000000000000000000000000000000000000002951 220.0
DYD3_k127_3378913_4 Nucleotidyl transferase K00966 - 2.7.7.13 0.0000000000000000000000000000000000000000000002162 185.0
DYD3_k127_3378913_5 - - - - 0.0000000000000000000000000004411 125.0
DYD3_k127_3378913_6 CYTH K05873 - 4.6.1.1 0.0000000000000000000000006456 111.0
DYD3_k127_3378913_7 aminotransferase class I and II K00812,K10907,K14260,K14267 GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 2.6.1.1,2.6.1.17,2.6.1.2,2.6.1.66 0.0001651 44.0
DYD3_k127_3410249_0 Participates in both transcription termination and antitermination K02600 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003962 463.0
DYD3_k127_3410249_1 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003008 415.0
DYD3_k127_3410249_2 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000002117 141.0
DYD3_k127_3410249_3 arylsulfatase activity K01133 - 3.1.6.6 0.000000000000000000000000001258 120.0
DYD3_k127_3410249_4 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0005551 51.0
DYD3_k127_3416546_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 4.002e-234 733.0
DYD3_k127_3416546_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 9.735e-225 707.0
DYD3_k127_3416546_10 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.00000000000000001357 90.0
DYD3_k127_3416546_11 amine dehydrogenase activity - - - 0.00000002612 67.0
DYD3_k127_3416546_2 ATPases associated with a variety of cellular activities K01990,K09689,K09691,K09693 - 3.6.3.38,3.6.3.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 466.0
DYD3_k127_3416546_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002102 294.0
DYD3_k127_3416546_4 ABC-2 type transporter K09690 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001352 250.0
DYD3_k127_3416546_5 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 - 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000002967 186.0
DYD3_k127_3416546_6 - - - - 0.000000000000000000000000000000000000000000004285 186.0
DYD3_k127_3416546_7 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.000000000000000000000000000001709 138.0
DYD3_k127_3416546_8 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000000000000000000000003598 125.0
DYD3_k127_3416546_9 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.000000000000000000006699 97.0
DYD3_k127_3443534_0 FtsX-like permease family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005061 535.0
DYD3_k127_3443534_1 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005857 527.0
DYD3_k127_3443534_2 PQQ-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001506 265.0
DYD3_k127_3443534_3 - - - - 0.00000000000000000009056 103.0
DYD3_k127_3443534_4 beta-propeller repeat - - - 0.000000003758 65.0
DYD3_k127_3535907_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 1.718e-216 680.0
DYD3_k127_3535907_1 peptidyl-lysine modification to peptidyl-hypusine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002623 357.0
DYD3_k127_3535907_2 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.00000000000000000000000000000000000000000000000000000003508 203.0
DYD3_k127_3535907_3 Urate oxidase N-terminal - - - 0.00000000000000000000000000000000000003059 153.0
DYD3_k127_3535907_4 YhhN family - - - 0.00000000000000001177 97.0
DYD3_k127_3535907_5 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000001843 92.0
DYD3_k127_3545038_0 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004677 446.0
DYD3_k127_3545038_1 Aldehyde dehydrogenase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002036 361.0
DYD3_k127_3545038_2 TonB-dependent siderophore receptor K02014 - - 0.00004956 48.0
DYD3_k127_3587618_0 unfolded protein binding K04079 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004469 478.0
DYD3_k127_3587618_1 Radical SAM superfamily K04069 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000181 430.0
DYD3_k127_3587618_2 Subtilase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005737 364.0
DYD3_k127_3587618_3 Calcineurin-like phosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007599 334.0
DYD3_k127_3587618_4 Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000654 246.0
DYD3_k127_3587618_5 Heavy metal translocating P-type atpase K01533,K17686 - 3.6.3.4,3.6.3.54 0.00000000000000000000000000000000000000000000000000002203 196.0
DYD3_k127_3587618_7 Tetratricopeptide repeat - - - 0.000000000000000000002961 109.0
DYD3_k127_3643605_0 TonB-dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002805 362.0
DYD3_k127_3643605_1 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002114 319.0
DYD3_k127_3643605_2 MacB-like periplasmic core domain K02003,K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004073 279.0
DYD3_k127_3643605_3 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000005794 230.0
DYD3_k127_3643605_4 Putative serine dehydratase domain K01753 - 4.3.1.18 0.00000000000000000000000000000000000000000000000000000000000000008957 229.0
DYD3_k127_3659132_0 Belongs to the glycosyl hydrolase 13 family K01200 - 3.2.1.41 7.4e-286 898.0
DYD3_k127_3659132_1 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type K11381 - 1.2.4.4 6.595e-222 707.0
DYD3_k127_3659132_10 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000006918 226.0
DYD3_k127_3659132_11 Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism K01488,K18286 GO:0000034,GO:0003674,GO:0003824,GO:0006139,GO:0006144,GO:0006145,GO:0006146,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009113,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0018130,GO:0019239,GO:0019438,GO:0019439,GO:0034641,GO:0034654,GO:0042440,GO:0043094,GO:0043096,GO:0043101,GO:0043103,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0046083,GO:0046100,GO:0046101,GO:0046112,GO:0046113,GO:0046148,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0072523,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.5.4.4,3.5.4.40 0.0000000000000000000000000000000000000000000000000000008358 207.0
DYD3_k127_3659132_12 DinB superfamily - - - 0.00000000000000000000000000000000000000000000001836 188.0
DYD3_k127_3659132_13 - - - - 0.000000000000000000000000000000000000000000000976 178.0
DYD3_k127_3659132_14 translation initiation factor activity K06996 - - 0.0000000000000000000000000000000000001316 144.0
DYD3_k127_3659132_15 Transcriptional regulator - - - 0.0000000000000000000000000000000002253 139.0
DYD3_k127_3659132_16 SNARE associated Golgi protein - - - 0.0000001009 53.0
DYD3_k127_3659132_17 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K10126 - - 0.0003034 46.0
DYD3_k127_3659132_18 Two component, sigma54 specific, transcriptional regulator, Fis family K07714 - - 0.0004335 46.0
DYD3_k127_3659132_2 Threonine dehydratase K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005267 441.0
DYD3_k127_3659132_3 Phage integrase, N-terminal SAM-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000353 379.0
DYD3_k127_3659132_4 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000379 352.0
DYD3_k127_3659132_5 amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004383 306.0
DYD3_k127_3659132_6 Evidence 4 Homologs of previously reported genes of K03975 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005432 264.0
DYD3_k127_3659132_7 Protein of unknown function (DUF1684) K09164 - - 0.0000000000000000000000000000000000000000000000000000000000000000001122 261.0
DYD3_k127_3659132_8 aminopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000001281 261.0
DYD3_k127_3659132_9 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000004608 237.0
DYD3_k127_3666500_0 Belongs to the LOG family K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000002359 241.0
DYD3_k127_3666500_1 Methyltransferase domain - - - 0.000000000000000000000000000000000000000004204 163.0
DYD3_k127_3666500_2 von Willebrand factor, type A - - - 0.0000000000000000000000000000000000006376 151.0
DYD3_k127_3666500_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000003777 115.0
DYD3_k127_3666500_5 Probable molybdopterin binding domain - - - 0.0000000000000000000009853 101.0
DYD3_k127_3666500_6 oxidoreductase activity - - - 0.0002 53.0
DYD3_k127_3679801_0 Two component, sigma54 specific, transcriptional regulator, Fis family K07713,K07714,K19641 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002319 364.0
DYD3_k127_3679801_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006082 282.0
DYD3_k127_3679801_2 - - - - 0.0000000000000000000000000000000000000005993 168.0
DYD3_k127_3679801_3 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000004276 149.0
DYD3_k127_3679801_4 Pfam:N_methyl_2 - - - 0.00000000000000004722 88.0
DYD3_k127_3679801_5 Pfam:N_methyl_2 - - - 0.000000000000549 76.0
DYD3_k127_3715628_0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K03388,K12527 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6,1.97.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002113 453.0
DYD3_k127_3715628_1 Cytochrome b(N-terminal)/b6/petB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000701 435.0
DYD3_k127_3715628_2 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006803 279.0
DYD3_k127_3715628_3 PFAM Rieske 2Fe-2S domain K02636,K03886 - 1.10.9.1 0.0000000000000000000000000000002769 131.0
DYD3_k127_3715628_4 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000001126 69.0
DYD3_k127_3715628_5 Catalyzes the NAD( )-dependent oxidative deamination of L-alanine to pyruvate, and the reverse reaction, the reductive amination of pyruvate K19244 - 1.4.1.1 0.00003245 54.0
DYD3_k127_373265_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0000098,GO:0000166,GO:0003674,GO:0003824,GO:0004013,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009066,GO:0009068,GO:0009069,GO:0009087,GO:0009116,GO:0009119,GO:0009987,GO:0016020,GO:0016054,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0019899,GO:0022610,GO:0030260,GO:0030312,GO:0033353,GO:0034641,GO:0035375,GO:0035635,GO:0036094,GO:0040007,GO:0042278,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044273,GO:0044281,GO:0044282,GO:0044403,GO:0044406,GO:0044409,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0044650,GO:0046085,GO:0046128,GO:0046395,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0048037,GO:0050662,GO:0051186,GO:0051287,GO:0051701,GO:0051704,GO:0051806,GO:0051828,GO:0055086,GO:0070403,GO:0071704,GO:0071944,GO:0072521,GO:0097159,GO:1901135,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1901657 3.3.1.1 2.464e-219 703.0
DYD3_k127_373265_1 Cytochrome b(N-terminal)/b6/petB K00410,K00412,K02635,K02637 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003784 408.0
DYD3_k127_373265_2 Methyltransferase type 11 K03892 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000309 322.0
DYD3_k127_373265_3 Cytochrome c554 and c-prime K03620 - - 0.00000000000000000000000000000000000000000000000000000000000004886 245.0
DYD3_k127_373265_4 SMART phosphoesterase PHP domain protein - - - 0.000000000000000000000000000000000000000005472 176.0
DYD3_k127_373265_5 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.000000000000000000000000000000000000054 144.0
DYD3_k127_373265_6 Rieske [2Fe-2S] domain K00411,K02636,K03886 - 1.10.2.2,1.10.9.1 0.00000000000000000000000000000001768 133.0
DYD3_k127_373265_7 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.0000000003294 71.0
DYD3_k127_373265_8 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000001427 66.0
DYD3_k127_373265_9 Gram-negative bacterial TonB protein C-terminal - - - 0.000005963 57.0
DYD3_k127_3758456_0 Glycosyl hydrolase 36 superfamily, catalytic domain K00702,K13688 - 2.4.1.20 0.0 2670.0
DYD3_k127_3758456_1 COG0044 Dihydroorotase and related cyclic amidohydrolases K01464 - 3.5.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002647 546.0
DYD3_k127_3758456_2 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000000000000004688 187.0
DYD3_k127_3758456_3 SnoaL-like domain - - - 0.000000000000000000000001456 109.0
DYD3_k127_3758456_4 Methyltransferase domain - - - 0.00000003677 55.0
DYD3_k127_3758456_5 Cupin 2, conserved barrel domain protein - - - 0.000001178 56.0
DYD3_k127_3762252_0 B12 binding domain K00548 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006464,GO:0006479,GO:0006520,GO:0006555,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008213,GO:0008270,GO:0008276,GO:0008652,GO:0008705,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0019538,GO:0019752,GO:0019842,GO:0031419,GO:0032259,GO:0034641,GO:0035999,GO:0036094,GO:0036211,GO:0042084,GO:0042558,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046872,GO:0046906,GO:0046914,GO:0048037,GO:0050667,GO:0051186,GO:0071704,GO:0097159,GO:0140096,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.1.13 0.0 1253.0
DYD3_k127_3762252_1 Pyridoxal-dependent decarboxylase conserved domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000822 531.0
DYD3_k127_3762252_2 - - - - 0.0000000000000000000000000000000000001044 148.0
DYD3_k127_3767657_0 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005008 518.0
DYD3_k127_3767657_1 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002305 466.0
DYD3_k127_3767657_2 Tyrosine recombinase XerD K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001913 293.0
DYD3_k127_3767657_3 Binds directly to 16S ribosomal RNA K02968 - - 0.0000001432 59.0
DYD3_k127_3767657_4 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000002121 61.0
DYD3_k127_3779025_0 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000002403 241.0
DYD3_k127_3779025_1 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.00000000000000000000000000000000000000000000000000000001009 204.0
DYD3_k127_3779025_2 - - - - 0.000000000000000000000000000000000000000000000002332 192.0
DYD3_k127_3779025_3 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.0000000000000000000000000000000002615 139.0
DYD3_k127_3788875_0 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 7.609e-236 761.0
DYD3_k127_3788875_1 Alanine dehydrogenase/PNT, N-terminal domain K00324 - 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 432.0
DYD3_k127_3788875_2 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K03151 GO:0000049,GO:0002937,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0017144,GO:0018130,GO:0019438,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0042364,GO:0042723,GO:0042724,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:0090304,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001686 357.0
DYD3_k127_3788875_3 lyase activity K11645 GO:0003674,GO:0003824,GO:0004332,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016829,GO:0016830,GO:0016832,GO:0042802,GO:0044424,GO:0044444,GO:0044464 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004052 278.0
DYD3_k127_3788875_4 COGs COG2912 conserved - - - 0.000000000000000000000000000000000000000000000000000000000000000000000438 246.0
DYD3_k127_3788875_5 Belongs to the metal hydrolase YfiT family - - - 0.000000000000000000000000000000000000000000000000000000000005404 221.0
DYD3_k127_3788875_6 Thioredoxin - - - 0.000000000000000000000000000000000000000000000000000000000008813 220.0
DYD3_k127_3788875_7 GDP-mannose mannosyl hydrolase activity K01515 - 3.6.1.13 0.0000000000000000000000000000000000000000000000000000006863 197.0
DYD3_k127_3788875_8 Thioesterase K01075 - 3.1.2.23 0.0000000000000000000000001216 114.0
DYD3_k127_3788875_9 SMART Tetratricopeptide domain protein - - - 0.000000001215 70.0
DYD3_k127_3806961_0 Nickel-dependent hydrogenase K00436 - 1.12.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006962 610.0
DYD3_k127_3806961_1 coenzyme F420 hydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000183 387.0
DYD3_k127_3806961_2 Belongs to the SOS response-associated peptidase family - - - 0.00000000000000000000000000000000000000000000000000000000000000001123 231.0
DYD3_k127_3806961_3 serine-type peptidase activity K04773 - - 0.000000000000000000000000000000000000000000000001213 190.0
DYD3_k127_3806961_4 4Fe-4S binding domain - - - 0.0000000000000000000000000002444 116.0
DYD3_k127_3806961_5 spore germination K03605 - - 0.0000000000000000000000000008635 120.0
DYD3_k127_3806961_6 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B - - - 0.00000000000000000000000000575 111.0
DYD3_k127_3806961_7 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000001182 103.0
DYD3_k127_3826837_0 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009599 554.0
DYD3_k127_3826837_1 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005265 495.0
DYD3_k127_3826837_10 Domain of unknown function (DUF4395) - - - 0.00000006571 61.0
DYD3_k127_3826837_11 Domain present in phytochromes and cGMP-specific phosphodiesterases. K12266 - - 0.0000009123 60.0
DYD3_k127_3826837_12 Sortase and related acyltransferases K03823 - 2.3.1.183 0.0009029 50.0
DYD3_k127_3826837_2 HlyD family secretion protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002303 458.0
DYD3_k127_3826837_3 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K03386 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 396.0
DYD3_k127_3826837_4 Aminotransferase class I and II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000214 372.0
DYD3_k127_3826837_5 ATPases associated with a variety of cellular activities K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002767 378.0
DYD3_k127_3826837_6 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002533 337.0
DYD3_k127_3826837_7 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009576 331.0
DYD3_k127_3826837_8 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007351 258.0
DYD3_k127_3826837_9 Acetyltransferase (GNAT) domain - - - 0.0000000000000000108 86.0
DYD3_k127_3839813_0 Belongs to the glycosyl hydrolase 31 family K01187 - 3.2.1.20 1.388e-238 764.0
DYD3_k127_3839813_1 ASPIC and UnbV - - - 1.222e-222 718.0
DYD3_k127_3839813_10 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain - - - 0.000000000000000000000001403 109.0
DYD3_k127_3839813_11 response to antibiotic - - - 0.0000001115 64.0
DYD3_k127_3839813_12 glycerophosphoryl diester phosphodiesterase K01113,K01126 - 3.1.3.1,3.1.4.46 0.0002285 50.0
DYD3_k127_3839813_2 Alpha-amylase domain K01182 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 3.2.1.10 1.428e-211 672.0
DYD3_k127_3839813_3 peptidyl-tyrosine sulfation - - - 6.326e-199 654.0
DYD3_k127_3839813_4 LysR substrate binding domain K03717 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 325.0
DYD3_k127_3839813_5 Transcriptional regulator (LacI family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009498 291.0
DYD3_k127_3839813_6 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000006378 242.0
DYD3_k127_3839813_7 PFAM Xylose isomerase-like TIM barrel K03335 - 4.2.1.44 0.000000000000000000000000000000000000000000000000000000000000001878 228.0
DYD3_k127_3839813_8 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000002919 196.0
DYD3_k127_3839813_9 bacterial-type flagellum-dependent cell motility - - - 0.0000000000000000000000000000000001971 135.0
DYD3_k127_3869072_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001544 451.0
DYD3_k127_3869072_1 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.0000000000000000000000000000000000000000000009195 174.0
DYD3_k127_3869072_2 ethanolamine catabolic process K04027 - - 0.00000000000000000000000000000000008049 141.0
DYD3_k127_3869072_3 Universal stress protein family - - - 0.0000000000000000000000000000002862 128.0
DYD3_k127_3869072_4 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000001977 136.0
DYD3_k127_3869072_5 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000008784 125.0
DYD3_k127_3869072_6 ethanolamine utilization protein EutN carboxysome structural protein Ccml K04028,K08697 - - 0.00000000000000000000000004121 113.0
DYD3_k127_3869072_7 Haem-degrading K11477 - - 0.000000000000000000000001339 118.0
DYD3_k127_3869072_8 ethanolamine utilization protein EutN carboxysome structural protein Ccml K04028 - - 0.0000000000000000001912 95.0
DYD3_k127_3869072_9 ethanolamine utilization protein EutN carboxysome structural protein Ccml K04028 GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0033554,GO:0050896,GO:0051716 - 0.0000000000000000003194 89.0
DYD3_k127_387042_0 protein kinase related protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 394.0
DYD3_k127_387042_1 Iron-containing alcohol dehydrogenase K00001,K13954 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 381.0
DYD3_k127_387042_2 HupE / UreJ protein - - - 0.000000000000000000000000000000000000000000000000575 189.0
DYD3_k127_387042_3 Domain of unknown function (DU1801) - - - 0.0000000000000000000004974 100.0
DYD3_k127_387042_4 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000156 60.0
DYD3_k127_387042_5 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 - 4.1.2.4 0.00001857 51.0
DYD3_k127_3920254_0 Amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009466 497.0
DYD3_k127_3920254_1 Acts as a magnesium transporter K06213 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003582 362.0
DYD3_k127_3920254_10 Protein of unknown function (DUF533) - - - 0.0000004732 63.0
DYD3_k127_3920254_11 Putative porin - - - 0.0000009336 61.0
DYD3_k127_3920254_12 Uncharacterized protein conserved in bacteria (DUF2255) - - - 0.00001605 57.0
DYD3_k127_3920254_2 Peptidase family M50 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009038 291.0
DYD3_k127_3920254_3 glyoxalase III activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001897 249.0
DYD3_k127_3920254_4 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000002434 228.0
DYD3_k127_3920254_5 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000006572 226.0
DYD3_k127_3920254_6 Xylose isomerase-like TIM barrel - - - 0.00000000000000000000000000000000000000000000000000000000002473 216.0
DYD3_k127_3920254_7 Guanylyl transferase CofC like K09931 - - 0.000000000000000000000000000000000000569 147.0
DYD3_k127_3920254_8 Glycosyl transferase, family 2 - - - 0.000000000000000000000000000008554 137.0
DYD3_k127_3921918_0 PFAM UDP-glucose GDP-mannose dehydrogenase K13015 - 1.1.1.136 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005021 565.0
DYD3_k127_3921918_1 alpha beta alpha domain I K01840 - 5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000575 487.0
DYD3_k127_3921918_10 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000001531 180.0
DYD3_k127_3921918_11 positive regulation of growth rate - - - 0.000000000000000000000000000000000000000001873 171.0
DYD3_k127_3921918_12 PFAM thioesterase superfamily K07107 - - 0.00000000000000000000000000002892 130.0
DYD3_k127_3921918_13 PASTA K08884,K12132 - 2.7.11.1 0.00000000000000000000009569 107.0
DYD3_k127_3921918_14 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.0000000000000000000001391 110.0
DYD3_k127_3921918_16 lipolytic protein G-D-S-L family - - - 0.00000008258 65.0
DYD3_k127_3921918_2 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006609 402.0
DYD3_k127_3921918_3 Polysaccharide biosynthesis protein K01784,K08679 - 5.1.3.2,5.1.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001805 336.0
DYD3_k127_3921918_4 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002458 292.0
DYD3_k127_3921918_5 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000002234 259.0
DYD3_k127_3921918_6 Nucleotidyl transferase K00966 - 2.7.7.13 0.0000000000000000000000000000000000000000000000000000000000000000000000001474 262.0
DYD3_k127_3921918_7 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.0000000000000000000000000000000000000000000000000000000000000008078 234.0
DYD3_k127_3921918_8 Domain present in phytochromes and cGMP-specific phosphodiesterases. K12266 - - 0.00000000000000000000000000000000000000000000000000000001181 225.0
DYD3_k127_3921918_9 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.0000000000000000000000000000000000000000000002616 173.0
DYD3_k127_3922818_0 transcription factor binding K02584 - - 6.848e-207 654.0
DYD3_k127_3922818_1 ggdef domain - - - 0.0000000000000000000000000000000000000000000000000000000000001334 228.0
DYD3_k127_3922818_2 surface antigen - - - 0.0000000000000000000001715 112.0
DYD3_k127_3922818_3 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.000000000000000003843 96.0
DYD3_k127_3922818_4 - - - - 0.00000000000000009525 94.0
DYD3_k127_3922818_5 Ammonium transporter K03320 - - 0.0000001054 54.0
DYD3_k127_3922818_6 Belongs to the UPF0354 family - - - 0.000001929 59.0
DYD3_k127_3922818_7 Domain of unknown function (DUF4412) - - - 0.00002085 55.0
DYD3_k127_3931710_0 Carbamoyltransferase C-terminus K00612 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001424 608.0
DYD3_k127_3931710_1 Peptidase family C25 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009806 510.0
DYD3_k127_3931710_10 ABC-type polysaccharide polyol phosphate transport system ATPase component K09691 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000126 266.0
DYD3_k127_3931710_11 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002391 254.0
DYD3_k127_3931710_12 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005322 262.0
DYD3_k127_3931710_13 Macrocin-O-methyltransferase (TylF) K05303 - - 0.00000000000000000000000000000000000000000000000000000000009012 225.0
DYD3_k127_3931710_14 Glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.00000000000000000000000000000000000000000000000000000000105 216.0
DYD3_k127_3931710_15 protein methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000008221 212.0
DYD3_k127_3931710_16 ABC-2 type transporter K09690 - - 0.0000000000000000000000000000000000000000000000000001679 204.0
DYD3_k127_3931710_17 COG0463 Glycosyltransferases involved in cell wall biogenesis - - - 0.00000000000000000000000000000000000000000000000005031 191.0
DYD3_k127_3931710_18 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000171 181.0
DYD3_k127_3931710_19 SLBB domain K01991 - - 0.000000000000000000000000000000000000000000001397 175.0
DYD3_k127_3931710_2 asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 456.0
DYD3_k127_3931710_20 - - - - 0.000000000000000000000000000000000000000312 170.0
DYD3_k127_3931710_21 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000001043 149.0
DYD3_k127_3931710_22 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000004097 144.0
DYD3_k127_3931710_23 Thioesterase superfamily - - - 0.000000000000000000000000001176 125.0
DYD3_k127_3931710_24 Glycosyl transferases group 1 K13668 - 2.4.1.346 0.000000000000000000000000457 121.0
DYD3_k127_3931710_25 glycosyl transferase group 1 - - - 0.000000000000000000004571 109.0
DYD3_k127_3931710_26 methyltransferase - - - 0.000000000000000003486 97.0
DYD3_k127_3931710_27 Animal haem peroxidase - - - 0.00000000000000113 93.0
DYD3_k127_3931710_28 polysaccharide biosynthetic process - - - 0.00000000000000921 87.0
DYD3_k127_3931710_29 ubiE/COQ5 methyltransferase family - - - 0.000000000000746 80.0
DYD3_k127_3931710_3 Polyphosphate kinase 2 (PPK2) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 396.0
DYD3_k127_3931710_30 - - - - 0.0000000000009053 79.0
DYD3_k127_3931710_32 lipolytic protein G-D-S-L family - - - 0.0000144 57.0
DYD3_k127_3931710_33 Glycosyltransferase like family 2 K07011 - - 0.0002198 49.0
DYD3_k127_3931710_4 CobQ CobB MinD ParA nucleotide binding domain K08252,K13661,K16554,K16692 - 2.7.10.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002034 390.0
DYD3_k127_3931710_5 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007781 352.0
DYD3_k127_3931710_6 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002813 323.0
DYD3_k127_3931710_7 ABC-type antimicrobial peptide transport system, ATPase component K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006296 286.0
DYD3_k127_3931710_8 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005325 299.0
DYD3_k127_3931710_9 radical SAM domain protein K22227 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001317 274.0
DYD3_k127_3969181_0 General secretory system II, protein E domain protein K02454,K02652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002324 541.0
DYD3_k127_3969181_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000688 495.0
DYD3_k127_3969181_2 Short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000008993 185.0
DYD3_k127_3969181_3 lysine biosynthetic process via aminoadipic acid - - - 0.000000000000000000000000000000000002344 147.0
DYD3_k127_3969181_4 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.000000000000000000000000000009936 130.0
DYD3_k127_398321_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000802 630.0
DYD3_k127_398321_1 PFAM Aminotransferase class I and II K00812,K10907 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008931 316.0
DYD3_k127_398321_2 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000008084 228.0
DYD3_k127_398321_3 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 GO:0003674,GO:0003824,GO:0004595,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 0.0000000000000000000000000000000000000000000000000000001005 199.0
DYD3_k127_398321_4 Conserved hypothetical protein 95 - - - 0.00000000000000000000000000000008744 143.0
DYD3_k127_398321_5 Tetratricopeptide repeat - - - 0.0002762 52.0
DYD3_k127_3983419_0 Cysteine dioxygenase type I K00456 - 1.13.11.20 0.000000000000000000000000000000000000000000000000000000000000724 216.0
DYD3_k127_3983419_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000002636 183.0
DYD3_k127_3983419_2 MlaD protein K02067 - - 0.0000000000000000000000000000000000000000003438 171.0
DYD3_k127_3983419_3 ABC transporter K02065 - - 0.000000000000000000000005786 105.0
DYD3_k127_3983419_4 COGs COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.00000000000000000008725 106.0
DYD3_k127_3983419_5 serine-type endopeptidase activity - - - 0.000000000000000001551 98.0
DYD3_k127_3983419_6 YtxH-like protein - - - 0.0000000008822 64.0
DYD3_k127_4006736_0 Flavin containing amine oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002751 310.0
DYD3_k127_4006736_1 PFAM glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005514 283.0
DYD3_k127_4006736_2 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000001306 263.0
DYD3_k127_4006736_3 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000003591 240.0
DYD3_k127_4006736_4 arylsulfatase activity - - - 0.000000000000000000000000000000000000000000000001228 197.0
DYD3_k127_4006736_5 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.00000000000000000000000000000000000000000000002089 193.0
DYD3_k127_4006736_6 Methyltransferase type 12 - - - 0.00000000000000000000000000000000000000000000005043 194.0
DYD3_k127_4006736_7 PFAM glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000004564 165.0
DYD3_k127_4006736_8 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000164 162.0
DYD3_k127_4006736_9 Sulfatase K01133 - 3.1.6.6 0.0000000000000000000000000000000000000001187 173.0
DYD3_k127_4034188_0 Belongs to the peptidase S16 family - - - 1.6e-256 815.0
DYD3_k127_4034188_1 glutamate-cysteine ligase activity K06048 GO:0003674,GO:0003824,GO:0016874,GO:0016879 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 441.0
DYD3_k127_4034188_2 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002734 266.0
DYD3_k127_4034188_3 PFAM Serine threonine-protein kinase-like domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000001127 248.0
DYD3_k127_4034188_4 Probably functions as a manganese efflux pump - - - 0.0000000000000000000000000000000000000000000000000006361 208.0
DYD3_k127_4034188_5 Transcriptional regulator, Crp Fnr family - - - 0.000000000000000000000000000000000711 139.0
DYD3_k127_4034188_6 Belongs to the heme-copper respiratory oxidase family - - - 0.0000000000000000000000000000005254 137.0
DYD3_k127_4034188_7 - - - - 0.000000000000000000000000001439 130.0
DYD3_k127_4034188_8 GDSL-like Lipase/Acylhydrolase - - - 0.0000000000218 76.0
DYD3_k127_4034518_0 Phosphopantetheine attachment site - - - 3.424e-247 795.0
DYD3_k127_4034518_1 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009657 542.0
DYD3_k127_4034518_2 Cys/Met metabolism PLP-dependent enzyme K01739,K01758,K01760,K17217 - 2.5.1.48,4.4.1.1,4.4.1.2,4.4.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002231 443.0
DYD3_k127_4034518_3 EVE domain - - - 0.0000000000000000000000000000000000000000002994 161.0
DYD3_k127_4034518_4 regulation of translation K03530 - - 0.00000000000000000000000000001574 121.0
DYD3_k127_4034518_5 Divalent ion tolerance protein K03926 - - 0.0000000000000000000000000003085 121.0
DYD3_k127_4034518_7 cell cycle K05589,K12065,K13052 - - 0.0000008943 55.0
DYD3_k127_4039735_0 Carboxypeptidase regulatory-like domain - - - 1.083e-299 949.0
DYD3_k127_4039735_1 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004532 499.0
DYD3_k127_4039735_2 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005038 404.0
DYD3_k127_4039735_3 Cell wall formation K00075 - 1.3.1.98 0.00000000000000000000000000000001195 132.0
DYD3_k127_4039735_4 Acid phosphatase homologues - - - 0.0000000000000000006017 102.0
DYD3_k127_4039735_5 Cell division protein FtsQ K03589 - - 0.00000000000000008738 93.0
DYD3_k127_4039735_6 COG0457 FOG TPR repeat - - - 0.00007121 54.0
DYD3_k127_4040666_0 Protein tyrosine kinase K08282,K12132 - 2.7.11.1 1.825e-303 947.0
DYD3_k127_4040666_1 Peptidase dimerisation domain - - - 3.981e-202 640.0
DYD3_k127_4040666_2 aminopeptidase activity K01266 - 3.4.11.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002182 426.0
DYD3_k127_4040666_3 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000002388 243.0
DYD3_k127_4040666_4 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 0.000000000000000000000000000000008927 131.0
DYD3_k127_4040666_5 4Fe-4S dicluster domain K05524 - - 0.00000000000000000000000000000001435 130.0
DYD3_k127_4040666_6 COG0501 Zn-dependent protease with chaperone function - - - 0.0000000000000002219 93.0
DYD3_k127_404820_0 Glutaminyl-tRNA synthetase K01886 - 6.1.1.18 1.271e-274 856.0
DYD3_k127_404820_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885,K09698 - 6.1.1.17,6.1.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005389 514.0
DYD3_k127_404820_10 Dienelactone hydrolase family - - - 0.000000000000000000000000000001516 126.0
DYD3_k127_404820_11 Prolyl oligopeptidase family - - - 0.000000000000000000006185 97.0
DYD3_k127_404820_12 Universal stress protein family - - - 0.00000000000001105 85.0
DYD3_k127_404820_13 Prolyl oligopeptidase family - - - 0.00000000003495 74.0
DYD3_k127_404820_2 Amino acid kinase family K00926 - 2.7.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003555 409.0
DYD3_k127_404820_3 Belongs to the carbamoyltransferase HypF family K04656 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001753 295.0
DYD3_k127_404820_4 COG0378 Ni2 -binding GTPase involved in regulation of expression and maturation of urease and hydrogenase K04652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002705 289.0
DYD3_k127_404820_5 peptidase S9 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001103 280.0
DYD3_k127_404820_6 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000001239 265.0
DYD3_k127_404820_7 beta-propeller repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001938 261.0
DYD3_k127_404820_8 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000007503 240.0
DYD3_k127_404820_9 Probably plays a role in a hydrogenase nickel cofactor insertion step K04651 - - 0.0000000000000000000000000000003531 131.0
DYD3_k127_4055419_0 Outer membrane receptor for ferrienterochelin and colicins - - - 3.877e-259 833.0
DYD3_k127_4055419_1 Cys/Met metabolism PLP-dependent enzyme K01739,K01758,K01760,K17217 - 2.5.1.48,4.4.1.1,4.4.1.2,4.4.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003081 499.0
DYD3_k127_4055419_2 Rieske 2Fe-2S K00479 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009002 411.0
DYD3_k127_4055419_3 Glycine D-amino acid oxidases (deaminating) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004409 364.0
DYD3_k127_4055419_4 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823,K07250 - 2.6.1.19,2.6.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009732 294.0
DYD3_k127_4055419_5 phosphoprotein phosphatase activity K14680 - 6.5.1.3 0.000000000000000000000000000000000000000000000000319 186.0
DYD3_k127_4055419_6 TLC ATP/ADP transporter K03301 - - 0.0000000000000000000002338 106.0
DYD3_k127_4066129_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 8.883e-236 741.0
DYD3_k127_4066129_1 PFAM Natural resistance-associated macrophage protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 381.0
DYD3_k127_4066129_2 Inner membrane component of T3SS, cytoplasmic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000979 334.0
DYD3_k127_4066129_3 PFAM von Willebrand factor type A - - - 0.000000002744 61.0
DYD3_k127_406870_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 2.409e-209 686.0
DYD3_k127_406870_1 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009068 581.0
DYD3_k127_406870_2 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 322.0
DYD3_k127_406870_3 Belongs to the FPP GGPP synthase family K02523,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000211 266.0
DYD3_k127_406870_4 TatD family K03424 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000158 252.0
DYD3_k127_406870_5 COGs COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K13599 - - 0.00000000000000000000000000000000000000000000000000000000000000001053 250.0
DYD3_k127_406870_6 Belongs to the UPF0234 family K09767 - - 0.00000000000000000000000000000000000000000000000000000003567 205.0
DYD3_k127_406870_7 PhoQ Sensor - - - 0.000000000000000000000000000000006363 142.0
DYD3_k127_406870_8 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.00000000000000001715 84.0
DYD3_k127_4070410_0 ASPIC and UnbV - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003341 576.0
DYD3_k127_4070410_1 arylsulfatase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001901 369.0
DYD3_k127_4070410_2 ROK family K00845 - 2.7.1.2 0.000000000000000000000000000000000008362 147.0
DYD3_k127_4070410_3 Evidence 4 Homologs of previously reported genes of - - - 0.00000000000000002644 97.0
DYD3_k127_4070410_4 PFAM von Willebrand factor type A - - - 0.00003115 53.0
DYD3_k127_4070410_5 Tetratricopeptide repeat - - - 0.000123 55.0
DYD3_k127_4081497_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 3.494e-312 981.0
DYD3_k127_4081497_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001724 472.0
DYD3_k127_4081497_10 Belongs to the UPF0102 family K07460 - - 0.00000000000000000007248 104.0
DYD3_k127_4081497_11 - - - - 0.0000000000000000001242 97.0
DYD3_k127_4081497_12 sigma factor antagonist activity K04757,K07315 - 2.7.11.1,3.1.3.3 0.0000000000000000003954 95.0
DYD3_k127_4081497_13 PspA/IM30 family K03969 - - 0.0000000000001669 81.0
DYD3_k127_4081497_14 HEAT repeat - - - 0.00000005293 65.0
DYD3_k127_4081497_15 - - - - 0.000002725 49.0
DYD3_k127_4081497_2 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002426 398.0
DYD3_k127_4081497_3 Binding-protein-dependent transport system inner membrane component K02050 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005981 385.0
DYD3_k127_4081497_4 anion transmembrane transporter activity K02049 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004888 253.0
DYD3_k127_4081497_5 phosphoserine phosphatase activity K01768,K07315 - 3.1.3.3,4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000005984 265.0
DYD3_k127_4081497_6 ABC-type nitrate sulfonate bicarbonate transport system ATPase component K02049 - - 0.0000000000000000000000004084 113.0
DYD3_k127_4081497_7 PFAM SNARE associated Golgi protein - - - 0.000000000000000000000001256 111.0
DYD3_k127_4081497_8 antisigma factor binding K04749,K06378 - - 0.0000000000000000000001113 100.0
DYD3_k127_4081497_9 lipolytic protein G-D-S-L family - - - 0.00000000000000000001648 105.0
DYD3_k127_4113602_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0003674,GO:0003824,GO:0004812,GO:0004825,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006431,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006968 546.0
DYD3_k127_4113602_1 Belongs to the LarC family K09121 - 4.99.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 343.0
DYD3_k127_4113602_2 Belongs to the peptidase S8 family K14645 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006741 291.0
DYD3_k127_4113602_3 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009492 279.0
DYD3_k127_4113602_4 Belongs to the UPF0758 family K03630 - - 0.00000000000000000000000000000000000000000002022 174.0
DYD3_k127_4113602_5 lipolytic protein G-D-S-L family K20306 - - 0.0000000001175 74.0
DYD3_k127_4113602_6 ABC-type Na efflux pump, permease component K09696 - - 0.00000001684 68.0
DYD3_k127_4113602_7 lyase activity - - - 0.00001467 57.0
DYD3_k127_4125153_0 PFAM Aminotransferase class I and II K05825 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 548.0
DYD3_k127_4125153_1 N-Acyl-D-aspartate D-glutamate deacylase K06015 - 3.5.1.81 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000017 445.0
DYD3_k127_4125153_10 Subtilase family - - - 0.00000000000003811 78.0
DYD3_k127_4125153_11 Hemerythrin HHE cation binding domain - - - 0.0000000000002313 81.0
DYD3_k127_4125153_12 ACT domain - - - 0.0000000000003084 75.0
DYD3_k127_4125153_13 Family with sequence similarity 213 member - GO:0002682,GO:0002761,GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0016209,GO:0042221,GO:0044424,GO:0044464,GO:0045595,GO:0045637,GO:0045670,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051239,GO:0051716,GO:0055114,GO:0065007,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1902105,GO:1903706,GO:1990748,GO:2000026 - 0.000000002931 63.0
DYD3_k127_4125153_14 - - - - 0.00001509 56.0
DYD3_k127_4125153_2 Threonine/Serine exporter, ThrE - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004112 363.0
DYD3_k127_4125153_3 Protein of unknown function (DUF692) K09930 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 301.0
DYD3_k127_4125153_4 Belongs to the Glu Leu Phe Val dehydrogenases family K00263,K00271 - 1.4.1.23,1.4.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000002628 259.0
DYD3_k127_4125153_5 tRNA cytidylyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000002799 216.0
DYD3_k127_4125153_6 endonuclease III K01247 - 3.2.2.21 0.000000000000000000000000000000000000000000000000000002153 211.0
DYD3_k127_4125153_7 adenosine deaminase K01488 - 3.5.4.4 0.000000000000000000000000000000000000001137 167.0
DYD3_k127_4125153_8 deacetylase K22278 - 3.5.1.104 0.000000000000000000000000000000004086 138.0
DYD3_k127_4125153_9 - - - - 0.000000000000000000000000005727 129.0
DYD3_k127_4127978_0 Belongs to the argininosuccinate synthase family. Type K01940 - 6.3.4.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006868 526.0
DYD3_k127_4127978_1 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001835 369.0
DYD3_k127_4127978_2 stress-induced mitochondrial fusion - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004771 363.0
DYD3_k127_4127978_3 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000105 269.0
DYD3_k127_4127978_4 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.0000000000000000000000000000000000000000005827 169.0
DYD3_k127_4127978_5 Catalyzes the formation of N-acetyl-L-glutamate from acetyl-CoA and L-glutamate K00619 - 2.3.1.1 0.0000000000000000000000002838 120.0
DYD3_k127_4127978_6 proteolysis - - - 0.0000007692 59.0
DYD3_k127_4127978_7 argininosuccinate lyase K01755 - 4.3.2.1 0.00001738 55.0
DYD3_k127_4136735_0 Cytochrome c554 and c-prime - - - 4.144e-294 930.0
DYD3_k127_4136735_1 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005884 531.0
DYD3_k127_4136735_2 GlcNAc-PI de-N-acetylase - - - 0.0000000000000000000000000000000000000000000000000002719 201.0
DYD3_k127_4136735_3 ASPIC and UnbV - - - 0.00000000003716 78.0
DYD3_k127_4142981_0 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0040007,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000002017 267.0
DYD3_k127_4142981_1 Tetratricopeptide repeats - - - 0.0000000000000000000000000000000000000000000000000000000001248 232.0
DYD3_k127_4142981_2 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.00000000000000000000000000000000000000000000000000006872 195.0
DYD3_k127_4142981_3 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.000000000000000000000000000000000505 134.0
DYD3_k127_4142981_4 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.0000000000000000000000119 108.0
DYD3_k127_4142981_5 Belongs to the UPF0109 family K06960 - - 0.00008226 45.0
DYD3_k127_415482_0 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 5.953e-268 837.0
DYD3_k127_415482_1 Aromatic amino acid lyase K01745 - 4.3.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004708 534.0
DYD3_k127_415482_2 AAA ATPase domain - - - 0.00008968 55.0
DYD3_k127_415827_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 4.153e-278 866.0
DYD3_k127_415827_1 Acyl-CoA dehydrogenase, C-terminal domain K00248,K09478 - 1.3.8.1,1.3.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 537.0
DYD3_k127_415827_2 efflux transmembrane transporter activity K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002988 302.0
DYD3_k127_415827_3 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000004032 253.0
DYD3_k127_415827_4 efflux transmembrane transporter activity K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004874 256.0
DYD3_k127_415827_5 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000002634 192.0
DYD3_k127_415827_6 ROK family K00845 GO:0003674,GO:0003824,GO:0004340,GO:0004396,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019200,GO:0019637,GO:0044237,GO:0044238,GO:0044262,GO:0044424,GO:0044464,GO:0046835,GO:0051156,GO:0071704,GO:1901135 2.7.1.2 0.000000000000000000000000001513 117.0
DYD3_k127_415827_7 Putative esterase - - - 0.00000000000001548 87.0
DYD3_k127_4165849_0 involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane - - - 0.0 1358.0
DYD3_k127_4165849_1 Aldehyde dehydrogenase family K00294 - 1.2.1.88 4.109e-238 751.0
DYD3_k127_4165849_10 Secreted and surface protein containing fasciclin-like repeats - - - 0.000000000000000000000000000000000000000000000000001824 188.0
DYD3_k127_4165849_11 peptidyl-prolyl cis-trans isomerase activity K03769,K03771 - 5.2.1.8 0.000000000000000000000000000000000000000001208 171.0
DYD3_k127_4165849_12 B12 binding domain K22491 - - 0.00000000000000000000000000000000000000004478 163.0
DYD3_k127_4165849_13 transmembrane transport - - - 0.000000000000000000000000000000000009367 145.0
DYD3_k127_4165849_14 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K04757 - 2.7.11.1 0.0000000000000000009718 91.0
DYD3_k127_4165849_2 Cystathionine beta-synthase K01697 - 4.2.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 613.0
DYD3_k127_4165849_3 Glycosyl transferase family 2 K21349 - 2.4.1.268 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002079 518.0
DYD3_k127_4165849_4 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 389.0
DYD3_k127_4165849_5 Protein of unknown function (DUF1722) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004288 362.0
DYD3_k127_4165849_6 PFAM Aminotransferase class I and II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004732 331.0
DYD3_k127_4165849_7 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003038 255.0
DYD3_k127_4165849_8 Serine/threonine phosphatases, family 2C, catalytic domain K01090,K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000000000001067 240.0
DYD3_k127_4165849_9 Belongs to the arginase family K01480 - 3.5.3.11 0.0000000000000000000000000000000000000000000000000000000000000000001128 265.0
DYD3_k127_4212289_0 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity K00316 - 1.5.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001764 623.0
DYD3_k127_4212289_1 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003127 558.0
DYD3_k127_4212289_2 Sulfate permease family K03321 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000589 550.0
DYD3_k127_4212289_3 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K01834 - 5.4.2.11 0.0000000000000000000000000000000000000004198 151.0
DYD3_k127_4212289_4 Endoribonuclease L-PSP - - - 0.000000000000000000000000001303 130.0
DYD3_k127_4212289_5 lipolytic protein G-D-S-L family - - - 0.000000000000000000000799 110.0
DYD3_k127_4214223_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695,K03696 - - 4.822e-311 968.0
DYD3_k127_4214223_1 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002025 455.0
DYD3_k127_4214223_2 Probably functions as a manganese efflux pump - - - 0.0000000000000000000000000000000000000000000000002029 198.0
DYD3_k127_424107_0 amine dehydrogenase activity - - - 6.177e-206 650.0
DYD3_k127_424107_1 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007862 624.0
DYD3_k127_424107_10 Pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 310.0
DYD3_k127_424107_11 Pfam SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004223 284.0
DYD3_k127_424107_12 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002004 279.0
DYD3_k127_424107_13 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008901 274.0
DYD3_k127_424107_14 BMC - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006237 248.0
DYD3_k127_424107_15 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.000000000000000000000000000000000000000000000000000000000000003682 225.0
DYD3_k127_424107_16 Pyridoxamine 5'-phosphate oxidase K07006 - - 0.000000000000000000000000000000000000000000000000000000000000005249 224.0
DYD3_k127_424107_17 - - - - 0.00000000000000000000000000000000000000000000000000000000000001919 227.0
DYD3_k127_424107_18 PFAM Fatty acid hydroxylase superfamily - - - 0.00000000000000000000000000000000000000000000000000000009377 211.0
DYD3_k127_424107_19 Glycosyl transferase group 2 family protein - - - 0.0000000000000000000000000000000000000000002631 177.0
DYD3_k127_424107_2 Involved in the tonB-independent uptake of proteins K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001951 570.0
DYD3_k127_424107_20 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000002347 149.0
DYD3_k127_424107_21 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.00000000000000000000000000000000002817 140.0
DYD3_k127_424107_22 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000005294 130.0
DYD3_k127_424107_23 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000000000000000007008 130.0
DYD3_k127_424107_24 PFAM Rhodanese-like domain - - - 0.00000000000000000000000003535 113.0
DYD3_k127_424107_25 - - - - 0.00000000000000000000003835 107.0
DYD3_k127_424107_26 Tetratricopeptide repeat - - - 0.00000000000000000000004192 104.0
DYD3_k127_424107_27 - - - - 0.00000000000002518 75.0
DYD3_k127_424107_28 nuclease activity K07062 - - 0.00000000000003244 76.0
DYD3_k127_424107_3 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004867 477.0
DYD3_k127_424107_30 nuclease activity K07062 - - 0.0000000001466 67.0
DYD3_k127_424107_31 Putative zinc-finger - - - 0.000002466 59.0
DYD3_k127_424107_32 - - - - 0.00005899 51.0
DYD3_k127_424107_33 PFAM NAD-dependent epimerase dehydratase - - - 0.0002119 54.0
DYD3_k127_424107_34 Protein of unknown function (DUF1059) - - - 0.0002408 52.0
DYD3_k127_424107_35 - - - - 0.0002588 50.0
DYD3_k127_424107_4 CAAX prenyl protease N-terminal, five membrane helices - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004786 475.0
DYD3_k127_424107_5 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000919 437.0
DYD3_k127_424107_6 radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008164 349.0
DYD3_k127_424107_7 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 346.0
DYD3_k127_424107_8 protein kinase activity K01972,K02342,K04096 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 2.7.7.7,6.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006563 340.0
DYD3_k127_424107_9 PFAM TrkA-N domain K03499 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 331.0
DYD3_k127_4247271_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 GO:0008150,GO:0040007 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009146 539.0
DYD3_k127_4247271_1 phenylalanyl-tRNA synthetase (beta subunit) K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006609 456.0
DYD3_k127_4247271_2 PFAM glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002054 369.0
DYD3_k127_4247271_3 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004852 326.0
DYD3_k127_4247271_4 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000000000000000000000000758 215.0
DYD3_k127_4247271_5 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000001393 176.0
DYD3_k127_4247271_6 Yip1 domain - - - 0.00000000000000000000000001013 125.0
DYD3_k127_4247271_7 Uncharacterized protein conserved in bacteria (DUF2062) K09928 - - 0.000000000000000000000001081 108.0
DYD3_k127_4247271_8 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.0000000000001622 74.0
DYD3_k127_4247271_9 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0000000000004962 72.0
DYD3_k127_4261032_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004956 500.0
DYD3_k127_4261032_1 PFAM PfkB domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004726 402.0
DYD3_k127_4261032_10 Protein of unknown function (DUF523) K03783 - 2.4.2.1 0.00000000000000000000000000000000000000000000000009422 190.0
DYD3_k127_4261032_11 - - - - 0.0000000000000000000000000000000000000000000000002553 185.0
DYD3_k127_4261032_12 Glyoxalase-like domain K05606 - 5.1.99.1 0.0000000000000000000000000000000000001308 145.0
DYD3_k127_4261032_13 nitric oxide dioxygenase activity - - - 0.000000000000000000000000000000002035 133.0
DYD3_k127_4261032_14 Trypsin-like peptidase domain - - - 0.00000000000000000000000000000003513 143.0
DYD3_k127_4261032_15 cheY-homologous receiver domain - - - 0.0000000000000000000000000000003823 126.0
DYD3_k127_4261032_16 - - - - 0.000000000000000000002265 100.0
DYD3_k127_4261032_17 PFAM CBS domain K04767 - - 0.00000000000000000001034 99.0
DYD3_k127_4261032_18 lipolytic protein G-D-S-L family - - - 0.000000000003589 78.0
DYD3_k127_4261032_19 Adenylate cyclase - - - 0.0006962 51.0
DYD3_k127_4261032_2 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001513 376.0
DYD3_k127_4261032_3 SPFH domain-Band 7 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005678 378.0
DYD3_k127_4261032_4 Lipid-A-disaccharide synthetase K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001324 308.0
DYD3_k127_4261032_5 TIGRFAM LAO AO transport system ATPase K07588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 297.0
DYD3_k127_4261032_6 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001866 287.0
DYD3_k127_4261032_7 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001679 283.0
DYD3_k127_4261032_8 translation initiation factor activity K06996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003985 260.0
DYD3_k127_4261032_9 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.00000000000000000000000000000000000000000000000006039 191.0
DYD3_k127_4302601_0 acyl-coa dehydrogenase K09456 - - 4.17e-234 735.0
DYD3_k127_4302601_1 Protein of unknown function, DUF255 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005749 615.0
DYD3_k127_4302601_2 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA K00639 - 2.3.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001605 520.0
DYD3_k127_4302601_3 Molybdenum cofactor sulfurase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000222 494.0
DYD3_k127_4302601_4 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation K09773 - 2.7.11.33,2.7.4.28 0.00000000000000000000000000000000000000000000000002326 191.0
DYD3_k127_4302601_5 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000000000001956 147.0
DYD3_k127_4302601_6 - - - - 0.00000000000000000001971 100.0
DYD3_k127_4302601_7 Domain of unknown function (DUF4439) - - - 0.0000000000099 72.0
DYD3_k127_4302601_8 ChrR Cupin-like domain K07167 - - 0.0000000003422 70.0
DYD3_k127_4302601_9 Anti-sigma-K factor rskA - - - 0.00001692 55.0
DYD3_k127_4311883_0 PFAM Type II secretion system protein E K02652 - - 3.55e-215 704.0
DYD3_k127_4311883_1 PFAM Type II secretion system F domain K02653 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002717 270.0
DYD3_k127_4311883_2 Belongs to the GSP D family K02453 - - 0.000000000000000000000000000000000000000000000001397 189.0
DYD3_k127_4311883_3 Prokaryotic N-terminal methylation motif K02456 - - 0.0000000000000000000000000000000000000000447 157.0
DYD3_k127_4311883_4 Sigma factor PP2C-like phosphatases - - - 0.000000000000000000000000000000000000001181 161.0
DYD3_k127_4311883_5 type II secretion system protein G K02456 - - 0.0000000000000000000000000000003373 130.0
DYD3_k127_4311883_6 Pilus assembly protein K02662 - - 0.0000000000000000004139 98.0
DYD3_k127_4311883_7 PFAM Fimbrial assembly family protein K02663 - - 0.0002257 53.0
DYD3_k127_4328276_0 COG0457 FOG TPR repeat - - - 1.456e-213 677.0
DYD3_k127_4328276_1 PFAM Aldehyde dehydrogenase - - - 3.387e-195 619.0
DYD3_k127_4328276_10 - - - - 0.00000000000008703 85.0
DYD3_k127_4328276_11 Bacterial extracellular solute-binding protein, family 7 - - - 0.00004626 46.0
DYD3_k127_4328276_12 CHAT domain - - - 0.0002196 52.0
DYD3_k127_4328276_2 transporter, DctM subunit K11690 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003366 614.0
DYD3_k127_4328276_3 PFAM FAD linked oxidase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001506 544.0
DYD3_k127_4328276_4 Peptidase dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002012 463.0
DYD3_k127_4328276_5 SCP-2 sterol transfer family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009288 258.0
DYD3_k127_4328276_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001377 256.0
DYD3_k127_4328276_7 Sulfatase - - - 0.0000000000000000000000000000000000000000136 174.0
DYD3_k127_4328276_9 DinB family - - - 0.00000000000000003537 89.0
DYD3_k127_4332645_0 Domain of unknown function (DUF4331) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005641 524.0
DYD3_k127_4332645_1 PFAM membrane protein involved in aromatic hydrocarbon degradation K06076 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001856 403.0
DYD3_k127_4332645_2 Carbon-nitrogen hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001774 369.0
DYD3_k127_4332645_3 EAL domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007494 313.0
DYD3_k127_4332645_4 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000009744 213.0
DYD3_k127_4332645_5 - - - - 0.000000000000000000000000000000000000000000000000000000001791 211.0
DYD3_k127_4332645_6 Cupin - - - 0.00000000000000000000000000000000000000000001112 181.0
DYD3_k127_4332645_7 D-alanine [D-alanyl carrier protein] ligase activity K00635 - 2.3.1.20 0.000000000000000000000000000000000008165 140.0
DYD3_k127_4340624_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000377 341.0
DYD3_k127_4340624_1 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006578 267.0
DYD3_k127_4340624_2 PFAM Polysaccharide export protein - - - 0.00000000000000000000000000000000000000000000000000009114 207.0
DYD3_k127_4340624_4 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis - - - 0.00000000000000001064 91.0
DYD3_k127_4348406_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 0.0 1287.0
DYD3_k127_4348406_1 AAA ATPase, central domain protein K07478 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008765 511.0
DYD3_k127_4348406_2 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005775 396.0
DYD3_k127_4348406_3 PhoD-like phosphatase K01113 - 3.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005738 323.0
DYD3_k127_4348406_4 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454,K02652 - - 0.00000000000000000000000000000000000000000000000000000001529 217.0
DYD3_k127_4348406_5 belongs to the cytidylate kinase family. Type 1 subfamily K00800,K00945,K03977 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.5.1.19,2.7.4.25 0.0000000000000000000000000000000000000000000000000003169 192.0
DYD3_k127_4348406_6 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000000000000003078 164.0
DYD3_k127_4348406_7 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.00000000000000000000000000000199 126.0
DYD3_k127_4348406_8 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000002306 104.0
DYD3_k127_4348406_9 COG2010 Cytochrome c, mono- and diheme variants - - - 0.000000000000000000008476 105.0
DYD3_k127_436307_0 PFAM Alpha amylase, catalytic K00690,K05341 - 2.4.1.4,2.4.1.7 2.909e-207 670.0
DYD3_k127_436307_1 HAD-superfamily hydrolase, subfamily IIB K07026 - 3.1.3.70 0.000000000000000000000000001619 118.0
DYD3_k127_4385685_0 PFAM SMP-30 Gluconolaconase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004263 428.0
DYD3_k127_4385685_1 SpoIVB peptidase S55 K00973,K02414,K21449 - 2.7.7.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008243 345.0
DYD3_k127_4385685_2 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.000000000000000000000000001128 124.0
DYD3_k127_4385685_3 - - - - 0.00000000000000001958 88.0
DYD3_k127_4385685_4 Signal transduction histidine kinase, nitrogen specific K07708 - 2.7.13.3 0.0000004889 54.0
DYD3_k127_4386109_0 Periplasmic copper-binding protein (NosD) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004027 422.0
DYD3_k127_4386109_1 Cytochrome c K00413 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005087 390.0
DYD3_k127_4386109_10 Thioesterase-like superfamily - - - 0.000000000001544 71.0
DYD3_k127_4386109_11 Thioesterase-like superfamily - - - 0.0000001901 57.0
DYD3_k127_4386109_14 oligosaccharyl transferase activity - - - 0.000008884 59.0
DYD3_k127_4386109_15 - - - - 0.0000134 57.0
DYD3_k127_4386109_2 Belongs to the glycosyl hydrolase 28 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004332 342.0
DYD3_k127_4386109_3 ADP-ribosylation factor family K06883 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003498 314.0
DYD3_k127_4386109_4 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.000000000000000000000000000000000000000000000000000000000000000000004709 267.0
DYD3_k127_4386109_5 PFAM Roadblock LC7 family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000002152 224.0
DYD3_k127_4386109_6 cyclic nucleotide-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000001274 234.0
DYD3_k127_4386109_7 Thiol oxidoreductase - - - 0.000000000000000000000000000000000000000003133 171.0
DYD3_k127_4386109_8 Phage integrase family - - - 0.00000000000000000000000000000000000000006651 162.0
DYD3_k127_4386109_9 PFAM von Willebrand factor type A K07114 - - 0.0000000000000000000000001828 121.0
DYD3_k127_4396845_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K11928 - - 2.288e-204 646.0
DYD3_k127_4396845_1 PFAM sodium calcium exchanger membrane region K07301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001679 321.0
DYD3_k127_4396845_10 - - - - 0.000003812 51.0
DYD3_k127_4396845_2 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001802 328.0
DYD3_k127_4396845_3 3-oxo-5-alpha-steroid 4-dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001219 288.0
DYD3_k127_4396845_4 dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000008361 225.0
DYD3_k127_4396845_5 exo-alpha-(2->6)-sialidase activity - - - 0.00000000000000000000000000000009183 140.0
DYD3_k127_4396845_6 CBS domain - - - 0.000000000000000000000004533 108.0
DYD3_k127_4396845_7 - - - - 0.00000000000000000002333 96.0
DYD3_k127_4396845_8 PspC domain protein - - - 0.0000000000006346 75.0
DYD3_k127_4396845_9 oxidoreductase activity, acting on CH-OH group of donors - - - 0.000000003673 57.0
DYD3_k127_444817_0 Glycosyltransferase WbsX - - - 6.712e-243 771.0
DYD3_k127_444817_1 glycosyl transferase K20444 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002534 641.0
DYD3_k127_444817_10 CoA-binding domain - - - 0.000000000000000000000000000000000000000000000000000001598 200.0
DYD3_k127_444817_11 PFAM Radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000006337 177.0
DYD3_k127_444817_12 Sulfatase - - - 0.00000000000000000000000000000000000000000002196 186.0
DYD3_k127_444817_13 3-demethylubiquinone-9 3-O-methyltransferase activity K15257 - - 0.00000000000000000000000000000000000000001321 167.0
DYD3_k127_444817_14 Methyltransferase domain - - - 0.0000000000000000000000000000000000000003152 161.0
DYD3_k127_444817_15 Protein of unknown function (DUF1698) K15257 - - 0.0000000000000000000000000003201 124.0
DYD3_k127_444817_16 polysaccharide deacetylase - - - 0.00000000000000000002267 104.0
DYD3_k127_444817_17 membrane organization K07126,K07277 - - 0.000000000005653 78.0
DYD3_k127_444817_2 pfam abc K09691 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001853 405.0
DYD3_k127_444817_3 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003248 376.0
DYD3_k127_444817_4 PFAM Glycosyl transferase family 2 K07011 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002203 340.0
DYD3_k127_444817_5 overlaps another CDS with the same product name K07011 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 334.0
DYD3_k127_444817_6 PFAM ABC-2 type transporter K09690 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002025 277.0
DYD3_k127_444817_7 epimerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005522 278.0
DYD3_k127_444817_8 Cephalosporin hydroxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001228 258.0
DYD3_k127_444817_9 TIGRFAM polymorphic outer membrane protein - - - 0.0000000000000000000000000000000000000000000000000000000000001163 241.0
DYD3_k127_4455766_0 Transcriptional regulator K03717 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009402 340.0
DYD3_k127_4455766_1 heat shock protein DnaJ domain protein K05516 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006061 255.0
DYD3_k127_4455766_2 MerR HTH family regulatory protein - - - 0.00000000008139 73.0
DYD3_k127_4455766_3 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.000000048 55.0
DYD3_k127_4455766_4 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.000008413 53.0
DYD3_k127_4475732_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 3.074e-261 845.0
DYD3_k127_4475732_1 Fatty acid hydroxylase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002532 426.0
DYD3_k127_4475732_2 phosphoprotein phosphatase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000369 266.0
DYD3_k127_4475732_3 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000000000000000000000008125 209.0
DYD3_k127_4475732_4 TLC ATP/ADP transporter K03301 - - 0.0000000000000000000000000000000000000000000000000001164 214.0
DYD3_k127_4475732_5 Calcineurin-like phosphoesterase - - - 0.000000000000000000000000001513 122.0
DYD3_k127_4475732_6 PFAM sigma-54 factor interaction domain-containing protein - - - 0.00000000000000000000000000165 115.0
DYD3_k127_4475732_7 - - - - 0.000000000006638 69.0
DYD3_k127_4478258_0 PFAM Type II secretion system protein E K02652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002451 604.0
DYD3_k127_4478258_1 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 569.0
DYD3_k127_4478258_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001874 293.0
DYD3_k127_4478258_3 Peptidase family S41 - - - 0.000000000000000000000000000000000000000000000000000000000000002892 236.0
DYD3_k127_4478258_4 Histidine kinase-like ATPase domain - - - 0.0000000000000000000000000000000000000000000000000000000006057 228.0
DYD3_k127_4478258_5 - - - - 0.000000000000000000000000000003859 127.0
DYD3_k127_4478258_6 CoA-binding domain protein K06929 - - 0.000000000000000000000000000009649 137.0
DYD3_k127_4508764_0 two component, sigma54 specific, transcriptional regulator, Fis family K13599 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000379 522.0
DYD3_k127_4508764_1 His Kinase A (phosphoacceptor) domain K13598 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000899 425.0
DYD3_k127_4508764_2 Methyltransferase domain - - - 0.00000000000000000000000000000000000000003871 175.0
DYD3_k127_4508764_3 PFAM von Willebrand factor type A domain - - - 0.00000000005031 74.0
DYD3_k127_4508764_4 RDD family - - - 0.0000000001899 74.0
DYD3_k127_4537095_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 4.424e-250 781.0
DYD3_k127_4537095_1 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00122,K00335 - 1.17.1.9,1.6.5.3 1.613e-225 723.0
DYD3_k127_4537095_2 2Fe-2S iron-sulfur cluster binding domain K00336 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005583 414.0
DYD3_k127_4537095_3 Molybdopterin oxidoreductase K00123 - 1.17.1.9 0.0000000000000000000000000007058 114.0
DYD3_k127_4537095_4 - - - - 0.00008333 51.0
DYD3_k127_4569458_0 Amidohydrolase family - - - 2.921e-231 756.0
DYD3_k127_4569458_1 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005927 501.0
DYD3_k127_4569458_2 Extracellular solute-binding protein K02055,K11069 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003861 491.0
DYD3_k127_4569458_3 A G-specific K03575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004983 285.0
DYD3_k127_4569458_4 serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000002095 242.0
DYD3_k127_4569458_5 Histidine triad (HIT) protein K02503 - - 0.000000000000000000000000000000000000000001792 158.0
DYD3_k127_4569458_6 Protein conserved in bacteria - - - 0.0000000000000000000001134 106.0
DYD3_k127_4573986_0 Belongs to the aldehyde dehydrogenase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005204 539.0
DYD3_k127_4573986_1 Zinc-uptake complex component A periplasmic K02077 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004285 399.0
DYD3_k127_4573986_2 ABC 3 transport family K02075 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004433 382.0
DYD3_k127_4573986_3 Amidinotransferase K01482 - 3.5.3.18 0.00000000000000000000000000000000000000000000000000000000000000006861 231.0
DYD3_k127_4573986_4 Ribonuclease H-like K09776 - - 0.0000000000004512 78.0
DYD3_k127_4573986_5 - - - - 0.0008195 42.0
DYD3_k127_4574753_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 2.25e-262 844.0
DYD3_k127_4574753_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002129 644.0
DYD3_k127_4574753_2 Belongs to the Dps family K04047 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002661 259.0
DYD3_k127_4574753_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000005025 151.0
DYD3_k127_4574753_4 Ferric uptake regulator family K09825 - - 0.00000000000000000000000000000001936 130.0
DYD3_k127_4574753_5 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.00000000003757 67.0
DYD3_k127_4574753_6 EamA-like transporter family - - - 0.0000004053 61.0
DYD3_k127_4574753_7 PFAM Cys Met metabolism PLP-dependent enzyme K01760 - 4.4.1.8 0.0000489 46.0
DYD3_k127_4581340_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005146 374.0
DYD3_k127_4581340_1 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000003808 124.0
DYD3_k127_4581340_2 exo-alpha-(2->6)-sialidase activity - - - 0.000000005841 71.0
DYD3_k127_4581340_3 Polymer-forming cytoskeletal - - - 0.0002263 54.0
DYD3_k127_4583900_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001895 460.0
DYD3_k127_4583900_1 Belongs to the peptidase M16 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007159 458.0
DYD3_k127_4583900_2 Pyridoxal-dependent decarboxylase conserved domain K00486,K01593 - 1.14.13.9,4.1.1.105,4.1.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003314 380.0
DYD3_k127_4583900_3 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000006829 204.0
DYD3_k127_4583900_4 long-chain fatty acid transporting porin activity - - - 0.000000000000000000000000003279 128.0
DYD3_k127_4583900_5 Sigma-70 region 2 K03088 - - 0.00000000000000000000000005248 113.0
DYD3_k127_4587382_0 Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX K03405 - 6.6.1.1 4.318e-195 620.0
DYD3_k127_4587382_1 von Willebrand factor (vWF) type A domain K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003681 475.0
DYD3_k127_4587382_2 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 417.0
DYD3_k127_4587382_3 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005756 269.0
DYD3_k127_4587382_4 spermidine synthase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003041 276.0
DYD3_k127_4587382_5 regulator, PATAN and FRGAF domain-containing - - - 0.0000000000000000000000001514 111.0
DYD3_k127_4611270_0 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003295 484.0
DYD3_k127_4611270_1 NHL repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001834 457.0
DYD3_k127_4611270_2 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002438 440.0
DYD3_k127_4611270_3 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000004338 231.0
DYD3_k127_4611270_4 DinB family - - - 0.0000000000000000000000000000000000000000000000000000009552 196.0
DYD3_k127_4611270_5 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000000000000000000000000000000000000000692 211.0
DYD3_k127_4611270_6 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000009946 166.0
DYD3_k127_4611270_7 CDP-alcohol phosphatidyltransferase - - - 0.0000000000000000000000000000000000000000008278 169.0
DYD3_k127_4611270_8 methyltransferase K18846 - 2.1.1.180 0.00000000000000000000000765 108.0
DYD3_k127_4611270_9 TolB amino-terminal domain K03641 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998 - 0.0000000000000007236 89.0
DYD3_k127_4656752_0 COG0471 Di- and tricarboxylate - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005798 553.0
DYD3_k127_4656752_1 PFAM lipopolysaccharide biosynthesis - - - 0.00000000000000000000000000000000000000000000000000000000000000007923 241.0
DYD3_k127_4656752_2 PFAM alpha beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000005661 205.0
DYD3_k127_4656752_3 Protein of unknown function (DUF3810) - - - 0.0000000000000000000000000000000000000000000000001856 191.0
DYD3_k127_4656752_4 - catabolite gene activator and regulatory subunit of cAMP-dependent protein - - - 0.000000000000000002659 96.0
DYD3_k127_4743305_0 Glycosyl hydrolases family 15 - - - 1.713e-293 915.0
DYD3_k127_4743305_1 DNA polymerase beta thumb K02347 - - 2.897e-225 711.0
DYD3_k127_4743305_2 PFAM DNA primase small subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000162 597.0
DYD3_k127_4743305_3 Cytochrome P450 K15468 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 389.0
DYD3_k127_4743305_4 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000000000000000000000000000000000002114 226.0
DYD3_k127_4743305_5 PFAM blue (type 1) copper domain protein - - - 0.000000000000000000000000000000000000000000002934 173.0
DYD3_k127_4743305_6 Pfam Ankyrin K10799 - 2.4.2.30 0.00000000000000000000000000000000000004916 151.0
DYD3_k127_4743305_7 - - - - 0.000001007 54.0
DYD3_k127_4775602_0 Belongs to the NiFe NiFeSe hydrogenase large subunit family K06281 - 1.12.99.6 1.003e-265 828.0
DYD3_k127_4775602_1 TIGRFAM hydrogenase (NiFe) small subunit (hydA) K06282,K18008 - 1.12.2.1,1.12.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002328 458.0
DYD3_k127_4775602_2 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004756 441.0
DYD3_k127_4775602_3 Domain of unknown function (DUF4405) - - - 0.00000000000000000000000000000000000000000000001013 196.0
DYD3_k127_4775602_4 PFAM peptidase M52 hydrogen uptake protein K03605 - - 0.0000000000000000000000000000005166 130.0
DYD3_k127_4775602_5 Iron permease FTR1 family K07243 - - 0.00000000000007114 78.0
DYD3_k127_4781355_0 glycosyl transferase group 1 K00754 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003857 429.0
DYD3_k127_4781355_1 Bacillithiol biosynthesis BshC K22136 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001899 257.0
DYD3_k127_4781355_2 Thioesterase-like superfamily - - - 0.0000000000000000000000000000000000000000000000002697 184.0
DYD3_k127_4781355_3 GlcNAc-PI de-N-acetylase K01463 - - 0.00000000000000000000000000000000000000000003773 181.0
DYD3_k127_4809742_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 1.996e-321 1047.0
DYD3_k127_4809742_1 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004174 321.0
DYD3_k127_4809742_2 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.00000000000000000000000000000000000000003737 155.0
DYD3_k127_4809742_3 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000001768 88.0
DYD3_k127_4846735_0 Pyruvate phosphate dikinase, PEP/pyruvate binding domain - - - 0.0 1063.0
DYD3_k127_4846735_1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain - - - 0.0 1049.0
DYD3_k127_4846735_10 - - - - 0.000000000000000000000002064 111.0
DYD3_k127_4846735_2 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00262 - 1.4.1.4 1.261e-244 775.0
DYD3_k127_4846735_3 glutamate dehydrogenase [NAD(P)+] activity K00260,K00261,K00262 GO:0003674,GO:0003824,GO:0004352,GO:0004353,GO:0004354,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016638,GO:0016639,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.2,1.4.1.3,1.4.1.4 3.793e-218 687.0
DYD3_k127_4846735_4 tartrate metabolic process K01676,K01678 - 4.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000208 538.0
DYD3_k127_4846735_5 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01007 - 2.7.9.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003407 505.0
DYD3_k127_4846735_6 ThiF family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003087 482.0
DYD3_k127_4846735_7 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009485 345.0
DYD3_k127_4846735_8 metallophosphoesterase K07096 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 305.0
DYD3_k127_4846735_9 TIGRFAM MoaD family protein K03636 - - 0.00000000000000000000000000558 112.0
DYD3_k127_4882017_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 GO:0002790,GO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0031522,GO:0032940,GO:0032978,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034613,GO:0042277,GO:0042886,GO:0042887,GO:0043952,GO:0044425,GO:0044459,GO:0044464,GO:0045047,GO:0045184,GO:0046903,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 585.0
DYD3_k127_4882017_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002249 448.0
DYD3_k127_4882017_10 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.000000000000000000000000000000000000000000000000000005557 195.0
DYD3_k127_4882017_11 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.00000000000000000000000000000000000000000000000008229 181.0
DYD3_k127_4882017_12 Binds to the 23S rRNA K02876 - - 0.0000000000000000000000000000000000000000000000005247 183.0
DYD3_k127_4882017_13 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.000000000000000000000000000000000000000000003147 167.0
DYD3_k127_4882017_14 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000006685 148.0
DYD3_k127_4882017_15 Ribosomal protein L17 K02879 - - 0.00000000000000000000000000000285 136.0
DYD3_k127_4882017_16 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000005805 103.0
DYD3_k127_4882017_17 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.000000000006925 66.0
DYD3_k127_4882017_18 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0003674,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071944 - 0.0000000003843 64.0
DYD3_k127_4882017_19 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0000000003936 72.0
DYD3_k127_4882017_2 Elongation factor G, domain IV K02355 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 390.0
DYD3_k127_4882017_20 Ribosomal protein L30 K02907 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000001163 55.0
DYD3_k127_4882017_3 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005116 308.0
DYD3_k127_4882017_4 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000929 297.0
DYD3_k127_4882017_5 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001899 261.0
DYD3_k127_4882017_6 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002254 250.0
DYD3_k127_4882017_7 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000003171 218.0
DYD3_k127_4882017_8 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.0000000000000000000000000000000000000000000000000000000000007194 216.0
DYD3_k127_4882017_9 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.0000000000000000000000000000000000000000000000000000000003902 208.0
DYD3_k127_4894009_0 PFAM Methylmalonyl-CoA mutase K01848 - 5.4.99.2 7.207e-205 650.0
DYD3_k127_4894009_1 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002684 582.0
DYD3_k127_4894009_10 Protein of unknown function (DUF2911) - - - 0.0000001301 64.0
DYD3_k127_4894009_11 - - - - 0.0002486 54.0
DYD3_k127_4894009_2 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001639 557.0
DYD3_k127_4894009_3 O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS - - - 0.000000000000000000000000000000000000000000000000000000000000000000002624 260.0
DYD3_k127_4894009_4 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00174 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000001912 215.0
DYD3_k127_4894009_5 Nucleotidyl transferase K00975 - 2.7.7.27 0.000000000000000000000000000000000000001442 150.0
DYD3_k127_4894009_6 DinB superfamily K07552 - - 0.0000000000000000000000000000000000009885 159.0
DYD3_k127_4894009_7 Tautomerase enzyme - - - 0.0000000000000000000000000000000014 144.0
DYD3_k127_4894009_8 - - - - 0.0000000000000000000003581 112.0
DYD3_k127_4894009_9 - - - - 0.0000000000272 68.0
DYD3_k127_4946890_0 lysine biosynthetic process via aminoadipic acid - - - 1.179e-225 722.0
DYD3_k127_4946890_1 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000007492 228.0
DYD3_k127_4946890_2 His Kinase A (phosphoacceptor) domain K02484,K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000001483 210.0
DYD3_k127_4946890_3 Peptidase propeptide and YPEB domain - - - 0.000006919 55.0
DYD3_k127_4946890_4 heat shock protein binding - - - 0.00001537 56.0
DYD3_k127_4946890_5 FecR protein - - - 0.0008902 49.0
DYD3_k127_496320_0 coenzyme F390 K01912 - 6.2.1.30 1.509e-244 779.0
DYD3_k127_496320_1 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001845 627.0
DYD3_k127_496320_2 Aminotransferase class I and II K00812 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004585 352.0
DYD3_k127_496320_3 arylsulfatase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000003681 239.0
DYD3_k127_496320_4 Sulfatase - - - 0.0000000000000000000000000000000000000000000000000001424 202.0
DYD3_k127_496320_5 - - - - 0.00000000000000000001319 107.0
DYD3_k127_496320_6 amine dehydrogenase activity - - - 0.00000008284 65.0
DYD3_k127_496320_7 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0000002525 63.0
DYD3_k127_496320_8 Carbohydrate family 9 binding domain-like - - - 0.0000002703 55.0
DYD3_k127_4971055_0 Protein kinase domain K12132 - 2.7.11.1 9.363e-230 741.0
DYD3_k127_4971055_1 PFAM Na H antiporter NhaC K03315 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002884 556.0
DYD3_k127_4971055_10 PIN domain - - - 0.000000000006728 74.0
DYD3_k127_4971055_2 C-terminus of AA_permease K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005793 455.0
DYD3_k127_4971055_3 NeuB family K03856 - 2.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009298 434.0
DYD3_k127_4971055_4 FMN-dependent dehydrogenase K00101,K00467,K16422 - 1.1.2.3,1.1.3.46,1.13.12.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000349 405.0
DYD3_k127_4971055_5 Phenazine biosynthesis-like protein K06998 - 5.3.3.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000241 274.0
DYD3_k127_4971055_6 Uncharacterized protein conserved in bacteria (DUF2332) - - - 0.00000000000000000000000000000000000000000000000000000000000000000005125 249.0
DYD3_k127_4971055_7 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000008826 163.0
DYD3_k127_4971055_8 - - - - 0.000000000000003702 83.0
DYD3_k127_4971055_9 GNAT acetyltransferase - - - 0.0000000000003052 73.0
DYD3_k127_4979206_0 efflux transmembrane transporter activity - - - 5.749e-265 841.0
DYD3_k127_4979206_1 haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007186 324.0
DYD3_k127_4979206_2 Response regulator receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005479 280.0
DYD3_k127_4979206_3 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000001973 231.0
DYD3_k127_5030937_0 AcrB/AcrD/AcrF family K07239 - - 2.237e-252 818.0
DYD3_k127_5030937_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000007368 202.0
DYD3_k127_5030937_2 Sigma-70 region 2 K03088 GO:0005575,GO:0005618,GO:0005623,GO:0006355,GO:0006950,GO:0006979,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0030312,GO:0031323,GO:0031326,GO:0033554,GO:0034605,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051409,GO:0051716,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:1903506,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000001977 141.0
DYD3_k127_5030937_3 Outer membrane efflux protein - - - 0.00000007632 63.0
DYD3_k127_5030937_4 Putative zinc-finger - - - 0.000003084 59.0
DYD3_k127_5032080_0 Amino acid permease - - - 1.04e-224 722.0
DYD3_k127_5032080_1 glycosyl transferase family K00697,K16055 - 2.4.1.15,2.4.1.347,3.1.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003199 599.0
DYD3_k127_5032080_10 ATP synthesis coupled proton transport K02109 - - 0.0000000000000000000000000000003668 129.0
DYD3_k127_5032080_11 Barrel-sandwich domain of CusB or HlyD membrane-fusion K02005 - - 0.0000000000000000000000000003379 131.0
DYD3_k127_5032080_12 - - - - 0.00000000000000000000002576 103.0
DYD3_k127_5032080_13 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.00000000000000000009428 91.0
DYD3_k127_5032080_14 Succinylglutamate desuccinylase / Aspartoacylase family K05526 - 3.5.1.96 0.000000000000001671 80.0
DYD3_k127_5032080_16 Acetyltransferase (GNAT) family - - - 0.00000004942 66.0
DYD3_k127_5032080_17 COG1846 Transcriptional regulators - - - 0.00000009788 63.0
DYD3_k127_5032080_2 Amidohydrolase family K06015 - 3.5.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 525.0
DYD3_k127_5032080_3 Amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006518 375.0
DYD3_k127_5032080_4 PFAM Peptidase M16 inactive domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003357 368.0
DYD3_k127_5032080_5 PFAM peptidase M16 domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002398 324.0
DYD3_k127_5032080_6 Mitochondrial biogenesis AIM24 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003071 264.0
DYD3_k127_5032080_7 ZIP Zinc transporter K07238,K11021,K16267 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004803 259.0
DYD3_k127_5032080_8 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.00000000000000000000000000000000000000000000000000000006034 211.0
DYD3_k127_5032080_9 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000008317 199.0
DYD3_k127_5035201_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1032.0
DYD3_k127_5035201_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 3.374e-261 829.0
DYD3_k127_5035201_10 COG NOG19146 non supervised orthologous group - - - 0.000000000000003136 81.0
DYD3_k127_5035201_11 Belongs to the anti-sigma-factor antagonist family K06378 - - 0.0000002742 59.0
DYD3_k127_5035201_12 Competence protein - - - 0.0000004722 51.0
DYD3_k127_5035201_13 PFAM Tetratricopeptide repeat - - - 0.000005306 55.0
DYD3_k127_5035201_2 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 1.026e-232 734.0
DYD3_k127_5035201_3 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001979 609.0
DYD3_k127_5035201_4 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003088 595.0
DYD3_k127_5035201_5 Aminotransferase class-V K01556 - 3.7.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001703 463.0
DYD3_k127_5035201_6 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042,K11528 - 2.3.1.157,2.7.7.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002804 376.0
DYD3_k127_5035201_7 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535,K13599 - 3.5.1.108 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 290.0
DYD3_k127_5035201_8 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000000002258 159.0
DYD3_k127_5035201_9 S1 P1 Nuclease - - - 0.00000000000000000000007211 109.0
DYD3_k127_5047935_0 Chemotaxis sensory transducer K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004291 346.0
DYD3_k127_5047935_1 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006935 324.0
DYD3_k127_5047935_2 PBS lyase HEAT domain protein repeat-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 336.0
DYD3_k127_5047935_3 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000000002143 262.0
DYD3_k127_5047935_4 regulator, PATAN and FRGAF domain-containing - - - 0.0000000000000000000000000000000003479 150.0
DYD3_k127_5054792_0 Sortilin, neurotensin receptor 3, - - - 0.0 1187.0
DYD3_k127_5054792_1 COGs COG0515 Serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 390.0
DYD3_k127_5054792_2 Protein tyrosine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 367.0
DYD3_k127_5054792_3 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000006511 235.0
DYD3_k127_5054792_4 Glyoxalase-like domain K05606 - 5.1.99.1 0.0000000000000000000000000000000000000002483 152.0
DYD3_k127_5054792_5 Cytochrome c K16255 - - 0.000000000000000000000000000003016 124.0
DYD3_k127_5054792_6 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000000000000000000000000307 124.0
DYD3_k127_5054792_7 - - - - 0.000000000000000000000000002292 122.0
DYD3_k127_5067882_0 4Fe-4S dicluster domain K00184 - - 0.0 1060.0
DYD3_k127_5067882_1 Polysulphide reductase, NrfD K00185 - - 4.424e-211 666.0
DYD3_k127_5067882_2 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 314.0
DYD3_k127_5067882_3 uracil phosphoribosyltransferase K00761 - 2.4.2.9 0.000000000000000000000000000000000000000000000000000000000007124 218.0
DYD3_k127_5067882_4 Protein of unknown function (DUF3341) - - - 0.000000000000000000000000000000000000000000002341 185.0
DYD3_k127_5067882_5 sugar fermentation stimulation protein K06206 - - 0.0000000000000000000000000000000000000000007286 163.0
DYD3_k127_5067882_6 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella K18691 - - 0.0000000000000001002 91.0
DYD3_k127_5067882_7 Protein of unknown function (DUF507) K09804 - - 0.00000000003888 74.0
DYD3_k127_5067882_8 Protein of unknown function (DUF507) - - - 0.00000002553 65.0
DYD3_k127_5076068_0 Heat shock 70 kDa protein K04043 - - 1.144e-230 722.0
DYD3_k127_5076068_1 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003477 601.0
DYD3_k127_5076068_10 His Kinase A (phosphoacceptor) domain - - - 0.0001183 56.0
DYD3_k127_5076068_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001204 590.0
DYD3_k127_5076068_3 PFAM Cytochrome b b6 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004479 428.0
DYD3_k127_5076068_4 Cytochrome b(C-terminal)/b6/petD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002266 416.0
DYD3_k127_5076068_5 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000193 289.0
DYD3_k127_5076068_6 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.000000000000000000000000000000000000000000000000000000000000001391 231.0
DYD3_k127_5076068_7 IstB-like ATP binding protein K02315 - - 0.00000000000000000000000000000000000000000000000000000000001294 216.0
DYD3_k127_5076068_8 Rieske [2Fe-2S] domain K02636,K03886 - 1.10.9.1 0.0000000000000000000000000000000000000000000000000000008255 203.0
DYD3_k127_5076068_9 Transcriptional regulator, MerR family K13640 GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.000000000000000000000000000000007815 149.0
DYD3_k127_508996_0 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003079 533.0
DYD3_k127_508996_1 Metallo-beta-lactamase superfamily K01069 - 3.1.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 458.0
DYD3_k127_508996_2 TIGRFAM phosphate ABC transporter, inner membrane subunit PstA K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008527 402.0
DYD3_k127_508996_3 TIGRFAM phosphate ABC transporter, inner membrane subunit PstC K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 386.0
DYD3_k127_508996_4 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002654 386.0
DYD3_k127_508996_5 ATPase-coupled phosphate ion transmembrane transporter activity K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003249 359.0
DYD3_k127_508996_6 TIGRFAM phosphate binding protein K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008201 292.0
DYD3_k127_508996_7 - - - - 0.0000000000000000000000000000000000003399 148.0
DYD3_k127_508996_8 Plays a role in the regulation of phosphate uptake K02039 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009892,GO:0010563,GO:0010966,GO:0019220,GO:0019222,GO:0031323,GO:0031324,GO:0032879,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0042802,GO:0042803,GO:0043269,GO:0043271,GO:0044070,GO:0044424,GO:0044464,GO:0045936,GO:0046983,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051049,GO:0051051,GO:0051174,GO:0065007,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 - 0.00000000000000000000000002198 122.0
DYD3_k127_508996_9 SMART Protein-tyrosine phosphatase, low molecular weight K03741 - 1.20.4.1 0.00000000000006789 83.0
DYD3_k127_5140947_0 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679,K01744 - 4.2.1.2,4.3.1.1 1.206e-229 717.0
DYD3_k127_5140947_1 Cys/Met metabolism PLP-dependent enzyme K01739 - 2.5.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009328 445.0
DYD3_k127_5140947_10 ATP-independent chaperone mediated protein folding - - - 0.000000000000000000000000000000008876 145.0
DYD3_k127_5140947_11 DinB family - - - 0.00000000000000000000003355 111.0
DYD3_k127_5140947_13 Adenylate cyclase - - - 0.000000000000134 76.0
DYD3_k127_5140947_14 Membrane - - - 0.00000006144 64.0
DYD3_k127_5140947_15 Protein kinase domain K12132 - 2.7.11.1 0.000002366 57.0
DYD3_k127_5140947_2 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000008268 243.0
DYD3_k127_5140947_3 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000002536 221.0
DYD3_k127_5140947_4 translation initiation inhibitor, yjgF family K04782 - 4.2.99.21 0.00000000000000000000000000000000000000000000000000007244 189.0
DYD3_k127_5140947_5 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.00000000000000000000000000000000000000000000000007906 187.0
DYD3_k127_5140947_6 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000001738 181.0
DYD3_k127_5140947_8 OsmC-like protein K06889,K07397 - - 0.00000000000000000000000000000000000000000005266 165.0
DYD3_k127_5140947_9 Zinc finger domain - - - 0.0000000000000000000000000000000000000006691 163.0
DYD3_k127_5145520_0 choline dehydrogenase activity - - - 4.11e-280 871.0
DYD3_k127_5145520_1 ATP-dependent helicase K03579 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001949 587.0
DYD3_k127_5145520_2 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 434.0
DYD3_k127_5145520_3 Pyridoxal-phosphate dependent enzyme K12339,K21148 - 2.5.1.113,2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003437 333.0
DYD3_k127_5145520_4 PFAM oxidoreductase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004706 325.0
DYD3_k127_5145520_5 JAB/MPN domain K21140 - 3.13.1.6 0.000000000000000000000000000003587 125.0
DYD3_k127_5145520_6 TIGRFAM MoaD family protein K03636 - - 0.00000000000000000006486 102.0
DYD3_k127_5159858_0 Sel1-like repeats. K07126 - - 0.0000000000000000000000000000000000000000000000000000000000001531 235.0
DYD3_k127_5159858_1 cyclic nucleotide binding K00384,K10914,K16922 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000003163 198.0
DYD3_k127_5159858_2 Branched-chain amino acid aminotransferase K00826 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004084,GO:0005488,GO:0006082,GO:0006464,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009081,GO:0009082,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0017144,GO:0018065,GO:0018193,GO:0018205,GO:0018272,GO:0018352,GO:0019538,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0036211,GO:0040007,GO:0043094,GO:0043102,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0048037,GO:0050662,GO:0070279,GO:0071265,GO:0071267,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.42 0.000000000000000000000000000000000000000009214 164.0
DYD3_k127_5159858_3 ATP:ADP antiporter activity K03301 - - 0.000000000000000000000000000000001901 135.0
DYD3_k127_5163220_0 ATP:ADP antiporter activity K03301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003414 608.0
DYD3_k127_5163220_1 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000000000000000000001115 176.0
DYD3_k127_5163220_2 Subtilase family - - - 0.00000000000000000000000000000000000008194 158.0
DYD3_k127_5163220_3 Phosphate-selective porin O and P K07221 - - 0.0000000000000000000000000000002938 138.0
DYD3_k127_5203118_0 Molydopterin dinucleotide binding domain K08352 - 1.8.5.5 1.501e-269 853.0
DYD3_k127_5203118_1 PFAM peptidase M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003838 465.0
DYD3_k127_5203118_2 Peptidase family M20/M25/M40 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 405.0
DYD3_k127_5203118_3 Belongs to the peptidase M24B family K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002457 334.0
DYD3_k127_5203118_4 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000003255 229.0
DYD3_k127_5203118_5 Thioesterase superfamily K10806 - - 0.000000000000000000000000001389 122.0
DYD3_k127_5213637_0 Copper amine oxidase, N2 domain K00276 - 1.4.3.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003412 561.0
DYD3_k127_5213637_1 serine-type peptidase activity K04773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 375.0
DYD3_k127_5213637_2 Aminopeptidase P, N-terminal domain K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003557 347.0
DYD3_k127_5213637_3 Belongs to the SOS response-associated peptidase family - - - 0.0000000000000000006906 89.0
DYD3_k127_5240712_0 OPT oligopeptide transporter protein - - - 1.298e-270 853.0
DYD3_k127_5240712_1 Belongs to the GARS family K01945,K01952,K13713 - 6.3.2.6,6.3.4.13,6.3.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001753 446.0
DYD3_k127_5240712_10 Fic/DOC family - GO:0000166,GO:0003008,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005783,GO:0005789,GO:0005886,GO:0006464,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006836,GO:0006950,GO:0006952,GO:0007600,GO:0007601,GO:0007610,GO:0007632,GO:0008081,GO:0008144,GO:0008150,GO:0008152,GO:0009314,GO:0009416,GO:0009581,GO:0009582,GO:0009583,GO:0009584,GO:0009605,GO:0009607,GO:0009617,GO:0009628,GO:0009966,GO:0009987,GO:0010646,GO:0012505,GO:0015696,GO:0016020,GO:0016021,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0017076,GO:0018117,GO:0018175,GO:0019538,GO:0023051,GO:0030176,GO:0030544,GO:0030554,GO:0031072,GO:0031224,GO:0031227,GO:0031967,GO:0031975,GO:0031984,GO:0032501,GO:0032553,GO:0032555,GO:0032559,GO:0033554,GO:0034260,GO:0034976,GO:0035639,GO:0036094,GO:0036211,GO:0042175,GO:0042578,GO:0042742,GO:0042802,GO:0042803,GO:0043086,GO:0043087,GO:0043167,GO:0043168,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044601,GO:0044602,GO:0044603,GO:0045117,GO:0046983,GO:0048519,GO:0048583,GO:0050789,GO:0050790,GO:0050794,GO:0050829,GO:0050877,GO:0050896,GO:0050906,GO:0050908,GO:0050953,GO:0050962,GO:0051087,GO:0051179,GO:0051234,GO:0051336,GO:0051346,GO:0051606,GO:0051608,GO:0051704,GO:0051707,GO:0051716,GO:0065007,GO:0065009,GO:0070566,GO:0070733,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0080134,GO:0080135,GO:0097159,GO:0097367,GO:0098542,GO:0098827,GO:0140096,GO:1900101,GO:1901265,GO:1901363,GO:1901564,GO:1903894,GO:1905897 - 0.000002867 57.0
DYD3_k127_5240712_2 Zinc-binding dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002473 375.0
DYD3_k127_5240712_3 Cell division ATP-binding protein ftsE K09811,K09812 GO:0000166,GO:0000287,GO:0000910,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0007049,GO:0008144,GO:0008150,GO:0008356,GO:0009898,GO:0009966,GO:0009987,GO:0010646,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019897,GO:0019898,GO:0022402,GO:0022603,GO:0022607,GO:0023051,GO:0030145,GO:0030554,GO:0031234,GO:0032153,GO:0032506,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042173,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043937,GO:0043938,GO:0044085,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045595,GO:0045597,GO:0045881,GO:0046677,GO:0046872,GO:0046914,GO:0048518,GO:0048522,GO:0048583,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051301,GO:0065007,GO:0070297,GO:0071840,GO:0071944,GO:0090529,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363,GO:1902531 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000187 292.0
DYD3_k127_5240712_4 beta-lactamase domain protein K01120 - 3.1.4.17 0.000000000000000000000000000000000000000000000000000000000000001633 226.0
DYD3_k127_5240712_5 Phosphoribulokinase / Uridine kinase family K00876 GO:0003674,GO:0003824,GO:0004849,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009224,GO:0009259,GO:0009260,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043094,GO:0043097,GO:0043174,GO:0043771,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046035,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.7.1.48 0.000000000000000000000000000000000000000000000000000000000008064 214.0
DYD3_k127_5240712_6 Belongs to the ABC-4 integral membrane protein family. FtsX subfamily K09811,K09812 GO:0000910,GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0006928,GO:0007049,GO:0007154,GO:0007165,GO:0007166,GO:0008150,GO:0008356,GO:0009274,GO:0009276,GO:0009605,GO:0009607,GO:0009615,GO:0009966,GO:0009987,GO:0010033,GO:0010646,GO:0016020,GO:0016021,GO:0016043,GO:0019221,GO:0022402,GO:0022603,GO:0022607,GO:0023051,GO:0023052,GO:0030312,GO:0030313,GO:0031224,GO:0031226,GO:0031975,GO:0032153,GO:0032506,GO:0034097,GO:0040007,GO:0040011,GO:0042173,GO:0042221,GO:0043207,GO:0043937,GO:0043938,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0045595,GO:0045597,GO:0045881,GO:0048518,GO:0048522,GO:0048583,GO:0048870,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051179,GO:0051301,GO:0051674,GO:0051704,GO:0051707,GO:0051716,GO:0065007,GO:0070098,GO:0070297,GO:0070887,GO:0071310,GO:0071345,GO:0071840,GO:0071944,GO:0071976,GO:0090529,GO:1902531 - 0.0000000000000000000000000000000000000000000000004832 188.0
DYD3_k127_5240712_7 hydrolase of the alpha beta-hydrolase fold K07019 - - 0.000000000000000000000000000000000000000000000006677 188.0
DYD3_k127_5240712_8 Belongs to the GARS family K01945 - 6.3.4.13 0.000000000000000000000000000000000000000000001326 181.0
DYD3_k127_5240712_9 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.0000000000000000000000000000004129 128.0
DYD3_k127_5245773_0 FtsX-like permease family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002563 574.0
DYD3_k127_5245773_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 438.0
DYD3_k127_5245773_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001884 316.0
DYD3_k127_5245773_3 - - - - 0.000000000000000000000000000000000000000000000000007283 204.0
DYD3_k127_5245773_4 pseudouridine synthase activity K06177,K06179,K06180 - 5.4.99.23,5.4.99.24,5.4.99.28,5.4.99.29 0.0000000000000000000000000000000003979 145.0
DYD3_k127_5300886_0 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000396 329.0
DYD3_k127_5300886_1 Bacterial sugar transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000001298 247.0
DYD3_k127_5300886_2 Nicotinamide mononucleotide transporter K03811 - - 0.000000000000000000000000000000000000000000000000000006113 202.0
DYD3_k127_5300886_3 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.00000000000000000000000000000000572 142.0
DYD3_k127_5300886_4 PFAM NAD-dependent epimerase dehydratase K01784,K08678 - 4.1.1.35,5.1.3.2 0.0000000000000000000000000000000803 136.0
DYD3_k127_5309171_0 ABC transporter C-terminal domain K06158 - - 3.896e-197 639.0
DYD3_k127_5309171_1 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005669 354.0
DYD3_k127_5309171_2 SMART AAA ATPase K02450 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 309.0
DYD3_k127_5309171_3 Belongs to the radical SAM superfamily. RlmN family K06941 - 2.1.1.192 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002683 300.0
DYD3_k127_5309171_4 Alpha/beta hydrolase family K07020 - - 0.0000000000000000000000000000000000000000000001965 175.0
DYD3_k127_5309171_5 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000001176 169.0
DYD3_k127_5309171_6 Dead deah box helicase domain protein K05592 - 3.6.4.13 0.00000000000003694 74.0
DYD3_k127_5309171_7 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.0000000000241 70.0
DYD3_k127_5313335_0 ASPIC and UnbV - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000514 607.0
DYD3_k127_5313335_1 ASPIC and UnbV - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002626 550.0
DYD3_k127_5313335_2 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000004963 171.0
DYD3_k127_5313335_3 response regulator, receiver - - - 0.00000000000000000000002324 104.0
DYD3_k127_5313335_4 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000003843 64.0
DYD3_k127_5313335_5 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.00002288 53.0
DYD3_k127_5321778_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 1.083e-254 809.0
DYD3_k127_5321778_1 WD40-like Beta Propeller Repeat K03641,K07277 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003657 560.0
DYD3_k127_5321778_2 DNA protecting protein DprA K04096 - - 0.0000000000000000000000000000000000000000000000000000000000002477 225.0
DYD3_k127_5321778_3 TPR repeat - - - 0.00000002186 62.0
DYD3_k127_538420_0 Protein of unknown function, DUF255 K06888 - - 4.404e-285 899.0
DYD3_k127_538420_1 efflux transmembrane transporter activity K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002379 362.0
DYD3_k127_538420_3 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.00000000002874 68.0
DYD3_k127_5384531_0 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 301.0
DYD3_k127_5384531_1 KR domain K13774 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 301.0
DYD3_k127_5384531_2 3'(2'),5'-bisphosphate nucleotidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001873 295.0
DYD3_k127_5384531_3 Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val) K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000082 199.0
DYD3_k127_5384531_4 Alpha/beta hydrolase of unknown function (DUF1057) - - - 0.0000000000000000002457 97.0
DYD3_k127_5384531_5 Cold shock protein K03704 - - 0.00000007376 56.0
DYD3_k127_5384531_6 - - - - 0.0000005593 55.0
DYD3_k127_5386079_0 AcrB/AcrD/AcrF family - - - 0.0 1264.0
DYD3_k127_5386079_1 cation efflux system protein (Heavy metal efflux pump) - - - 1.689e-303 962.0
DYD3_k127_5386079_10 FKBP-type peptidyl-prolyl cis-trans isomerase K03772 - 5.2.1.8 0.0000000000000000000000000000000000003544 143.0
DYD3_k127_5386079_11 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000008842 155.0
DYD3_k127_5386079_12 methyltransferase - - - 0.0000000000000000000000000000000001947 140.0
DYD3_k127_5386079_13 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000001217 138.0
DYD3_k127_5386079_14 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K01993,K02005 - - 0.00000000000000000000000001185 116.0
DYD3_k127_5386079_15 PFAM phosphoesterase, PA-phosphatase related - - - 0.0000000000000001525 94.0
DYD3_k127_5386079_16 peptidase - - - 0.0000000000000004326 90.0
DYD3_k127_5386079_17 bacterial-type flagellum-dependent cell motility - - - 0.000000000000009102 88.0
DYD3_k127_5386079_2 lysine biosynthetic process via aminoadipic acid - - - 1.082e-236 753.0
DYD3_k127_5386079_3 PFAM homoserine dehydrogenase K00003,K12524 - 1.1.1.3,2.7.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003207 402.0
DYD3_k127_5386079_4 Calcineurin-like phosphoesterase K01077 - 3.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 334.0
DYD3_k127_5386079_5 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002692 282.0
DYD3_k127_5386079_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002616 259.0
DYD3_k127_5386079_7 Putative porin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003053 261.0
DYD3_k127_5386079_8 Histidine kinase K07644,K18351 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000001746 258.0
DYD3_k127_5386079_9 Transcriptional regulator K07669 - - 0.0000000000000000000000000000000000000000000000000000000000003855 233.0
DYD3_k127_5389201_0 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 630.0
DYD3_k127_5389201_1 Zn-dependent dipeptidase, microsomal dipeptidase K01273 - 3.4.13.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005305 399.0
DYD3_k127_5389201_2 D-amino acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001745 380.0
DYD3_k127_5389201_3 Aminotransferase class-V - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007688 302.0
DYD3_k127_5389201_4 Amidohydrolase K03392 - 4.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000003422 262.0
DYD3_k127_5389201_5 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000002134 196.0
DYD3_k127_5389201_6 aminotransferase K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000006317 193.0
DYD3_k127_5389201_7 Belongs to the arginase family K01476 - 3.5.3.1 0.000000000000000000000000000000002448 144.0
DYD3_k127_5394567_0 xanthine dehydrogenase activity - - - 3.133e-219 706.0
DYD3_k127_5394567_1 ABC transporter K05847 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002314 263.0
DYD3_k127_5394567_2 Protein kinase domain K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000001247 261.0
DYD3_k127_5394567_3 ABC transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000007204 228.0
DYD3_k127_5394567_4 glycine betaine transport K05845,K05846 - - 0.0000000000000000000000000000000000000000000000000000000004721 208.0
DYD3_k127_5394567_5 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.00000000000000000000000000000000000000000000000008503 187.0
DYD3_k127_5394567_6 [2Fe-2S] binding domain K03518,K13483 - 1.2.5.3 0.00000000000000000000000000000000000000000000002448 181.0
DYD3_k127_5394567_7 COGs COG1463 ABC-type transport system involved in resistance to organic solvents periplasmic component K02067 - - 0.00000000000000000000003001 113.0
DYD3_k127_5394567_8 SEC-C motif - - - 0.00000007717 57.0
DYD3_k127_5398947_0 DNA polymerase K02337 GO:0003674,GO:0003824,GO:0003887,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032991,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044776,GO:0046483,GO:0061695,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 0.0 1074.0
DYD3_k127_5398947_1 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 1.346e-241 780.0
DYD3_k127_5398947_10 Cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000004684 203.0
DYD3_k127_5398947_11 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000002136 184.0
DYD3_k127_5398947_12 PFAM blue (type 1) copper domain protein - - - 0.000000000000000000000000000000000000000000000002284 182.0
DYD3_k127_5398947_13 cyclic nucleotide binding K10914 - - 0.00000000000000000000000000000000000000000000002659 178.0
DYD3_k127_5398947_14 cytochrome oxidase assembly K02259 - - 0.0000000000000000000000000000000000000004302 160.0
DYD3_k127_5398947_15 Protein of unknown function (DUF420) - - - 0.000000000000000000000000000000000002585 142.0
DYD3_k127_5398947_16 cytochrome c oxidase, subunit III K02276 - 1.9.3.1 0.00000000000000000000000000000000006985 142.0
DYD3_k127_5398947_17 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000002893 129.0
DYD3_k127_5398947_18 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 GO:0000166,GO:0003674,GO:0005488,GO:0005524,GO:0008144,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0097159,GO:0097367,GO:1901265,GO:1901363 2.7.7.87 0.0000000000000000000000000004621 120.0
DYD3_k127_5398947_19 NUDIX domain - - - 0.0000000000000000000000000004932 129.0
DYD3_k127_5398947_2 Belongs to the heme-copper respiratory oxidase family K02274 - 1.9.3.1 2.747e-222 705.0
DYD3_k127_5398947_20 Glycoprotease family K01409,K14742 - 2.3.1.234 0.000000000000000000000001017 112.0
DYD3_k127_5398947_21 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.000000000000000000001862 107.0
DYD3_k127_5398947_22 PQQ enzyme repeat - - - 0.000000000000000000002302 107.0
DYD3_k127_5398947_23 transglycosylase associated protein - - - 0.000000000002147 69.0
DYD3_k127_5398947_25 Protein of unknown function (DUF465) - - - 0.0000002631 55.0
DYD3_k127_5398947_26 S-layer homology domain K20541 - - 0.0003825 53.0
DYD3_k127_5398947_3 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004465 603.0
DYD3_k127_5398947_4 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004209 370.0
DYD3_k127_5398947_5 Type II secretion system (T2SS), protein E, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001584 257.0
DYD3_k127_5398947_6 COGs COG1622 Heme copper-type cytochrome quinol oxidase subunit 2 K02275 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000009215 237.0
DYD3_k127_5398947_7 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000004456 248.0
DYD3_k127_5398947_8 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.0000000000000000000000000000000000000000000000000000000004731 211.0
DYD3_k127_5398947_9 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000000000000000000000000000008057 222.0
DYD3_k127_5424789_0 Protein tyrosine kinase K08282,K12132 - 2.7.11.1 0.0 1010.0
DYD3_k127_5424789_1 P-type ATPase K17686 - 3.6.3.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000369 328.0
DYD3_k127_5424789_2 - - - - 0.00000000000000000000000000000000000000001364 163.0
DYD3_k127_5424789_3 Belongs to the enoyl-CoA hydratase isomerase family K01692,K13238 - 4.2.1.17,5.3.3.8 0.00000000000000000000000000000000000000273 156.0
DYD3_k127_5424789_4 4Fe-4S double cluster binding domain K18930 - - 0.0000000000000000000000000000003269 129.0
DYD3_k127_5424789_5 Belongs to the Dps family K04047 - - 0.000000000000000000000005782 101.0
DYD3_k127_5424789_6 SNARE associated Golgi protein - - - 0.000000000001172 77.0
DYD3_k127_5445413_0 WD40-like Beta Propeller Repeat - - - 2.439e-218 712.0
DYD3_k127_5445413_1 Aminotransferase class-III K00823,K07250 - 2.6.1.19,2.6.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 542.0
DYD3_k127_5445413_10 - - - - 0.0000000000000000000000000000000001914 144.0
DYD3_k127_5445413_11 - - - - 0.0000000000000000000000000002074 125.0
DYD3_k127_5445413_12 TPM domain - - - 0.000000000000000000000000008354 116.0
DYD3_k127_5445413_13 - - - - 0.000000000000000000007931 100.0
DYD3_k127_5445413_14 Conserved hypothetical protein (DUF2461) - - - 0.000000000000038 81.0
DYD3_k127_5445413_15 oxidoreductase activity K07114,K12511 - - 0.000000009848 68.0
DYD3_k127_5445413_16 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0002999 44.0
DYD3_k127_5445413_2 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 534.0
DYD3_k127_5445413_3 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006354 469.0
DYD3_k127_5445413_4 NMT1-like family K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 338.0
DYD3_k127_5445413_5 FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002206 296.0
DYD3_k127_5445413_6 ABC-type nitrate sulfonate bicarbonate transport system ATPase component K02049,K15555 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002739 261.0
DYD3_k127_5445413_7 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.00000000000000000000000000000000000000000000000000000000000000000007321 237.0
DYD3_k127_5445413_8 PIN domain - - - 0.0000000000000000000000000000000000000000000000001646 181.0
DYD3_k127_5445413_9 Binding-protein-dependent transport system inner membrane component K02050,K15552 - - 0.000000000000000000000000000000000000000000000002732 186.0
DYD3_k127_5476019_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000001173 231.0
DYD3_k127_5476019_1 Psort location Cytoplasmic, score - - - 0.00000000000000000000000000000009769 133.0
DYD3_k127_5476019_2 - - - - 0.000000000000000000000000000001915 126.0
DYD3_k127_5476019_3 phosphate-selective porin K07221 - - 0.00000000008606 74.0
DYD3_k127_5476019_4 PFAM Cytidylyltransferase family K18678 GO:0003674,GO:0003824,GO:0006066,GO:0006629,GO:0006720,GO:0006721,GO:0006766,GO:0006775,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009987,GO:0010189,GO:0010276,GO:0016101,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0017144,GO:0018130,GO:0033306,GO:0034308,GO:0042360,GO:0042362,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901576,GO:1901615,GO:1901617,GO:1903173 2.7.1.182 0.0002915 53.0
DYD3_k127_5476578_0 Isocitrate dehydrogenase - - - 4.678e-211 663.0
DYD3_k127_5476578_1 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000264 594.0
DYD3_k127_5476578_10 Catalyzes the dehydration of methylthioribulose-1- phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1- phosphate (DK-MTP-1-P) K08964 - 4.2.1.109 0.00000000000000000000000000000000000000000000003902 176.0
DYD3_k127_5476578_11 PFAM EAL domain - - - 0.00000000000000000000000000000001368 129.0
DYD3_k127_5476578_12 Belongs to the pirin family K06911 - - 0.000000000000000000003342 93.0
DYD3_k127_5476578_13 Acts as a magnesium transporter K06213 - - 0.00003569 48.0
DYD3_k127_5476578_2 [isocitrate dehydrogenase (NADP+)] phosphatase activity K00906 GO:0000166,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004721,GO:0004722,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006081,GO:0006082,GO:0006091,GO:0006097,GO:0006099,GO:0006101,GO:0006464,GO:0006468,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008772,GO:0009060,GO:0009987,GO:0015980,GO:0016208,GO:0016301,GO:0016310,GO:0016311,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016788,GO:0016791,GO:0016999,GO:0017076,GO:0017144,GO:0018105,GO:0018193,GO:0018209,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0035639,GO:0036094,GO:0036211,GO:0042578,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044260,GO:0044262,GO:0044267,GO:0044281,GO:0044424,GO:0044464,GO:0045333,GO:0046487,GO:0050790,GO:0055114,GO:0065007,GO:0065009,GO:0070262,GO:0071704,GO:0072350,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564 2.7.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007266 597.0
DYD3_k127_5476578_3 D-isomer specific 2-hydroxyacid dehydrogenase catalytic K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004886 447.0
DYD3_k127_5476578_4 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003679 413.0
DYD3_k127_5476578_5 Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 395.0
DYD3_k127_5476578_6 Aminotransferase, class V - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002608 349.0
DYD3_k127_5476578_7 mannose-ethanolamine phosphotransferase activity K01077 GO:0003674,GO:0003824,GO:0004035,GO:0004346,GO:0005488,GO:0005575,GO:0005623,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0008877,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0042578,GO:0042597,GO:0043167,GO:0043169,GO:0044237,GO:0044464,GO:0046872,GO:0046914,GO:0050308,GO:0050309,GO:0098519 3.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001863 315.0
DYD3_k127_5476578_8 Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene) K09880 - 3.1.3.77 0.00000000000000000000000000000000000000000000000000000000000000000000001773 248.0
DYD3_k127_5476578_9 Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway K08967 - 1.13.11.53,1.13.11.54 0.0000000000000000000000000000000000000000000000000000000000000000005 250.0
DYD3_k127_5484758_0 Amidohydrolase family - - - 2.414e-274 889.0
DYD3_k127_5484758_1 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 6.977e-203 645.0
DYD3_k127_5484758_10 Belongs to the short-chain dehydrogenases reductases (SDR) family K00019,K07535 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0010130,GO:0016043,GO:0016491,GO:0016614,GO:0016616,GO:0018913,GO:0018915,GO:0022607,GO:0042537,GO:0043933,GO:0044085,GO:0044237,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360 1.1.1.30 0.000000000000000000000000000000000000000000000000000000000000000003568 234.0
DYD3_k127_5484758_11 Creatinine amidohydrolase K01470 - 3.5.2.10 0.0000000000000000000000000000000000000000000000000000009906 201.0
DYD3_k127_5484758_12 kinase activity K01007 - 2.7.9.2 0.0000000000000000000000000000000000000000000000001222 196.0
DYD3_k127_5484758_13 Endoribonuclease L-PSP - - - 0.000000000000000000000000000000000000002841 149.0
DYD3_k127_5484758_14 Flavin reductase like domain - - - 0.000000000000000000000000000000000000003688 151.0
DYD3_k127_5484758_15 Redoxin K03564 - 1.11.1.15 0.000000000000000000000000000003674 121.0
DYD3_k127_5484758_16 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000006499 104.0
DYD3_k127_5484758_17 Thioesterase-like superfamily K01075 - 3.1.2.23 0.00000000000000001483 88.0
DYD3_k127_5484758_18 BON domain - - - 0.000000000000007373 85.0
DYD3_k127_5484758_19 Redoxin K03564 - 1.11.1.15 0.00000000000001421 74.0
DYD3_k127_5484758_2 Sodium:neurotransmitter symporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001411 544.0
DYD3_k127_5484758_20 peroxiredoxin activity K01607 - 4.1.1.44 0.0000000000001908 75.0
DYD3_k127_5484758_21 Alpha beta K06889 - - 0.000002522 55.0
DYD3_k127_5484758_3 AMP-binding enzyme C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004206 486.0
DYD3_k127_5484758_4 NADH oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004104 392.0
DYD3_k127_5484758_5 PFAM Peptidase M1, membrane alanine aminopeptidase K01256 - 3.4.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002801 409.0
DYD3_k127_5484758_6 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K03309 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 376.0
DYD3_k127_5484758_7 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000264 330.0
DYD3_k127_5484758_8 Enoyl-CoA hydratase/isomerase K15866 - 5.3.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000001707 265.0
DYD3_k127_5484758_9 PFAM thioesterase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000003106 231.0
DYD3_k127_5485242_0 amine dehydrogenase activity - - - 4.953e-267 857.0
DYD3_k127_5485242_1 PFAM Band 7 protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005614 433.0
DYD3_k127_5485242_10 COGs COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.00000000001136 76.0
DYD3_k127_5485242_2 Oxidoreductase molybdopterin binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000006747 235.0
DYD3_k127_5485242_3 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.00000000000000000000000000000000000000000000000000000000000000002775 237.0
DYD3_k127_5485242_4 Histidine kinase K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000005564 207.0
DYD3_k127_5485242_5 Belongs to the NiCoT transporter (TC 2.A.52) family K07241 - - 0.00000000000000000000000000000000000000000006525 168.0
DYD3_k127_5485242_6 cellular response to DNA damage stimulus K07340 - - 0.00000000000000000000000000000000000000004555 156.0
DYD3_k127_5485242_7 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000004509 124.0
DYD3_k127_5485242_8 transporter antisigma-factor antagonist STAS K04749 - - 0.0000000000000000000000003558 108.0
DYD3_k127_5485242_9 Anti-sigma-K factor rskA - - - 0.0000000000000298 79.0
DYD3_k127_5486823_0 Chloride channel K03281 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000382 374.0
DYD3_k127_5486823_1 Chemotaxis sensory transducer K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706 355.0
DYD3_k127_5486823_10 Belongs to the peptidase S1C family - - - 0.0004573 52.0
DYD3_k127_5486823_2 Cytochrome c, mono- and diheme variants - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000003701 256.0
DYD3_k127_5486823_3 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000006332 233.0
DYD3_k127_5486823_4 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000007935 182.0
DYD3_k127_5486823_5 Cupin domain - - - 0.000000000000000000000000001017 117.0
DYD3_k127_5486823_6 - - - - 0.000000000000003016 79.0
DYD3_k127_5486823_7 Cytochrome C' - - - 0.00000000000003726 80.0
DYD3_k127_5486823_9 NolW domain protein - - - 0.00000002999 59.0
DYD3_k127_5487580_0 PFAM glycoside hydrolase family 3 domain protein K05349 - 3.2.1.21 1.413e-239 755.0
DYD3_k127_5487580_1 TonB-dependent receptor - - - 3.58e-228 747.0
DYD3_k127_5487580_10 oxidoreductase activity - - - 0.0000000000000003883 92.0
DYD3_k127_5487580_11 Ankyrin repeat K06867 - - 0.0000000008792 68.0
DYD3_k127_5487580_12 oxidoreductase activity - - - 0.000000004097 66.0
DYD3_k127_5487580_13 - - - - 0.00003577 55.0
DYD3_k127_5487580_14 - - - - 0.00006979 53.0
DYD3_k127_5487580_2 FtsX-like permease family K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008971 541.0
DYD3_k127_5487580_3 SIS domain K00820 - 2.6.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002175 351.0
DYD3_k127_5487580_4 ABC-type transport system involved in lysophospholipase L1 biosynthesis ATPase component K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001931 248.0
DYD3_k127_5487580_5 GDSL-like Lipase/Acylhydrolase family K10804 - 3.1.1.5 0.00000000000000000000000000000000000000000000000000000000002286 222.0
DYD3_k127_5487580_6 RelA SpoT domain protein - - - 0.000000000000000000000000000000000000000000000000000000004161 216.0
DYD3_k127_5487580_7 SIS domain K07106 - 4.2.1.126 0.00000000000000000000000000000000000000001785 160.0
DYD3_k127_5487580_8 ADP-ribosylation factor family K06883 - - 0.000000000000000000000000000000000000002888 168.0
DYD3_k127_5487580_9 oxidoreductase activity - - - 0.00000000000000000000001051 116.0
DYD3_k127_5507428_0 PFAM Permease for cytosine purines, uracil, thiamine, allantoin K03457 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008227 606.0
DYD3_k127_5507428_1 PFAM amidohydrolase K01464 - 3.5.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003873 373.0
DYD3_k127_5507428_2 Dipeptidase K01273 - 3.4.13.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005668 374.0
DYD3_k127_5507428_3 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000006561 83.0
DYD3_k127_5507428_4 NmrA-like family - - - 0.00000000012 70.0
DYD3_k127_5526952_0 ADP-ribosylglycohydrolase K05521 - 3.2.2.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006176 561.0
DYD3_k127_5526952_1 Short-chain dehydrogenase reductase SDR K00034 - 1.1.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007291 376.0
DYD3_k127_5526952_10 - - - - 0.000000111 59.0
DYD3_k127_5526952_2 Mut7-C ubiquitin K09122 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001526 279.0
DYD3_k127_5526952_3 Inositol monophosphatase family K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000006957 268.0
DYD3_k127_5526952_4 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 GO:0003674,GO:0003824,GO:0003866,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0071704,GO:1901576 2.5.1.19 0.00000000000000000000000000000000000000000000000000000000003035 213.0
DYD3_k127_5526952_5 WD40 repeats - - - 0.0000000000000000000000000000000000000000000000000001511 208.0
DYD3_k127_5526952_6 dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000000000002392 202.0
DYD3_k127_5526952_7 ApaG domain K06195 - - 0.0000000000000000000000000000000000000000003745 160.0
DYD3_k127_5526952_8 Histidine kinase-like ATPase domain K04757 - 2.7.11.1 0.00000000000000000000000000216 117.0
DYD3_k127_5526952_9 - - - - 0.0000000000005988 76.0
DYD3_k127_5527831_0 PFAM cell divisionFtsK SpoIIIE K03466 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001824 620.0
DYD3_k127_5527831_1 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005945 501.0
DYD3_k127_5527831_2 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009455 443.0
DYD3_k127_5527831_3 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.000000000000000000000000000000000000000000003727 173.0
DYD3_k127_5527831_4 Belongs to the thioredoxin family K03671 GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 - 0.000000000000000000000000000000003124 134.0
DYD3_k127_55280_0 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 2.438e-223 713.0
DYD3_k127_55280_1 Involved in the tonB-independent uptake of proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005072 582.0
DYD3_k127_55280_10 transmembrane spans. The family include ribonuclease BN that is involved in tRNA maturation P32146. This family of proteins does not seem to contain any completely conserved polar residues that would be expected in a nuclease enzyme, suggesting that many members of this family may not have this catalytic activity K07058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006289 297.0
DYD3_k127_55280_11 iron ion homeostasis K03641 - - 0.00000000000000000000000000000000000000000000000000000000000002799 235.0
DYD3_k127_55280_12 Belongs to the arylamine N-acetyltransferase family K00675 - 2.3.1.118 0.0000000000000000000000000000000000000000000000000000000000001088 222.0
DYD3_k127_55280_13 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000004724 195.0
DYD3_k127_55280_14 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000002288 166.0
DYD3_k127_55280_15 serine-type peptidase activity K01061,K06889 - 3.1.1.45 0.0000000000000000000000000000000000008859 160.0
DYD3_k127_55280_16 metal ion transmembrane transporter activity - - - 0.000000000000000000000000000000000005363 156.0
DYD3_k127_55280_17 LysM domain - - - 0.00000000000000000000000000000000007634 136.0
DYD3_k127_55280_18 SGNH hydrolase-like domain, acetyltransferase AlgX K19295 - - 0.000000000000000000000000001242 129.0
DYD3_k127_55280_19 - - - - 0.000000000000000000000000006398 122.0
DYD3_k127_55280_2 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005108 578.0
DYD3_k127_55280_20 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.00000000000000000000000001046 115.0
DYD3_k127_55280_21 Protein of unknown function (DUF1569) - - - 0.0000000000000000000000003195 113.0
DYD3_k127_55280_22 - - - - 0.0000000000000000005266 93.0
DYD3_k127_55280_3 purine nucleobase transmembrane transporter activity K06901 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008751 561.0
DYD3_k127_55280_4 lipoprotein localization to outer membrane K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 467.0
DYD3_k127_55280_5 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009151 453.0
DYD3_k127_55280_6 Amino acid permease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 399.0
DYD3_k127_55280_7 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003644 381.0
DYD3_k127_55280_8 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004883 358.0
DYD3_k127_55280_9 arylsulfatase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002969 351.0
DYD3_k127_5552391_0 Proprotein convertase P-domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 602.0
DYD3_k127_5552391_1 ROK family K00847 - 2.7.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003806 441.0
DYD3_k127_5552391_2 Histone deacetylase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001726 306.0
DYD3_k127_5552391_3 - - - - 0.0000000000000000000000000000003783 131.0
DYD3_k127_5552391_4 Bacterial PH domain - - - 0.0000000000000000000000000000004966 129.0
DYD3_k127_5552391_5 - - - - 0.0000000000000000000000000002202 126.0
DYD3_k127_5552391_6 cytochrome oxidase assembly K02259 - - 0.0002327 51.0
DYD3_k127_5574015_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006828 569.0
DYD3_k127_5574015_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002765 531.0
DYD3_k127_5574015_10 Belongs to the ompA family K03640 - - 0.000000000000000000000000000001781 129.0
DYD3_k127_5574015_11 lysine biosynthesis protein LysW K05826 - - 0.000000000006925 66.0
DYD3_k127_5574015_12 mttA/Hcf106 family K03116 - - 0.0000000001828 69.0
DYD3_k127_5574015_13 Periplasmic component of the Tol biopolymer transport system - - - 0.0000000104 66.0
DYD3_k127_5574015_2 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003172 518.0
DYD3_k127_5574015_3 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009889 484.0
DYD3_k127_5574015_4 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008338 350.0
DYD3_k127_5574015_5 Molybdenum cofactor synthesis domain protein K03750 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000718 275.0
DYD3_k127_5574015_6 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000004124 258.0
DYD3_k127_5574015_7 tRNA processing K06864,K09121 - 4.99.1.12 0.0000000000000000000000000000000000000000000000000000000000000001852 246.0
DYD3_k127_5574015_8 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0019509,GO:0019752,GO:0043094,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046523,GO:0071265,GO:0071267,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.23 0.0000000000000000000000000000000000000000000002794 173.0
DYD3_k127_5574015_9 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.0000000000000000000000000000000000000003561 169.0
DYD3_k127_5584275_0 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 1.55e-261 821.0
DYD3_k127_5584275_1 Penicillin-binding protein 1A K05366 - 2.4.1.129,3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002341 612.0
DYD3_k127_5584275_2 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002712 382.0
DYD3_k127_5584275_3 Dehydratase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001357 377.0
DYD3_k127_5584275_4 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002584 343.0
DYD3_k127_5584275_5 Beta-lactamase K17836 - 3.5.2.6 0.00000000000000000000000000000000000000000000000000000000000000000001579 244.0
DYD3_k127_5584275_6 domain, Protein - - - 0.000000000000000000000000000000000000000000000000000000000000003022 240.0
DYD3_k127_5584275_8 AMIN domain K02507,K02666 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0015976,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575 - 0.00000001656 66.0
DYD3_k127_5584275_9 peptidoglycan binding - - - 0.000004929 52.0
DYD3_k127_5587717_0 Carboxypeptidase regulatory-like domain - - - 3.648e-220 725.0
DYD3_k127_5587717_1 lysine biosynthetic process via aminoadipic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002581 541.0
DYD3_k127_5587717_2 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004611 352.0
DYD3_k127_5587717_3 Selenocysteine lyase - - - 0.00000000000000000000000000000000000000000000000000000000000000001099 236.0
DYD3_k127_5587717_4 Amino acid permease K03294 - - 0.0000000000000000000000000000000000000000000000000000000005241 220.0
DYD3_k127_5587717_5 Amidinotransferase - - - 0.0000000000000000000000000000009309 141.0
DYD3_k127_5587717_6 Oxidoreductase molybdopterin binding domain K07147 - - 0.00000000007072 65.0
DYD3_k127_5587717_7 Aminotransferase class-V - - - 0.00000003783 59.0
DYD3_k127_5600187_0 WD40-like Beta Propeller Repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002328 426.0
DYD3_k127_5600187_1 Glycosyl transferase family 21 - - - 0.00000000000000000000000000000000000000000000000000000001724 218.0
DYD3_k127_5600187_2 Ferritin-like domain K03594 - 1.16.3.1 0.0000000000000000000000000000000000000000000000000007888 187.0
DYD3_k127_5600187_3 2Fe-2S -binding domain protein K03518 - 1.2.5.3 0.0000000000000000000000000000000000002825 144.0
DYD3_k127_5600187_4 DUF218 domain - - - 0.0000000000000000000000000002645 126.0
DYD3_k127_5600187_5 Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na( ) movement across the membrane K15987 - 3.6.1.1 0.000000000000000000001602 95.0
DYD3_k127_5600187_6 Protein of unknown function (DUF2911) - - - 0.00000000000004949 78.0
DYD3_k127_5600187_7 - - - - 0.000000000009766 72.0
DYD3_k127_5600187_8 - - - - 0.000000000724 63.0
DYD3_k127_5600187_9 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000754 52.0
DYD3_k127_5604135_0 PFAM peptidase M14, carboxypeptidase A - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002219 616.0
DYD3_k127_5604135_1 FAD linked oxidases, C-terminal domain K18930 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009984 572.0
DYD3_k127_5604135_2 DNA photolyase K01669 - 4.1.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007093 549.0
DYD3_k127_5604135_3 COG1228 Imidazolonepropionase and related K01443 - 3.5.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002664 524.0
DYD3_k127_5604135_4 PFAM Oxidoreductase molybdopterin binding domain K07147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004902 333.0
DYD3_k127_5604135_5 COGs COG1680 Beta-lactamase class C and other penicillin binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008532 285.0
DYD3_k127_5604135_6 COG1228 Imidazolonepropionase and related K01443 - 3.5.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000419 266.0
DYD3_k127_5613756_0 MGS-like domain K00602 - 2.1.2.3,3.5.4.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006964 519.0
DYD3_k127_5613756_1 TonB dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002313 398.0
DYD3_k127_5613756_10 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000008905 68.0
DYD3_k127_5613756_11 Rhodanese Homology Domain - - - 0.0000000008425 70.0
DYD3_k127_5613756_12 domain, Protein - - - 0.0000006633 59.0
DYD3_k127_5613756_2 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042,K17468 - 2.9.1.1,4.3.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 387.0
DYD3_k127_5613756_3 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000005366 173.0
DYD3_k127_5613756_4 AAA domain - - - 0.000000000000000000000000000000000000002406 153.0
DYD3_k127_5613756_5 PFAM Nicotinamide mononucleotide transporter PnuC K03811 - - 0.0000000000000000000000000000000000003023 163.0
DYD3_k127_5613756_6 helix_turn_helix multiple antibiotic resistance protein - - - 0.000000000000000000000000000000001932 134.0
DYD3_k127_5613756_7 PFAM Peptidase family M23 K08259 - 3.4.24.75 0.00000000000000000000000001675 127.0
DYD3_k127_5613756_8 GTP cyclohydrolase I K01495 - 3.5.4.16 0.00000000000000000000005944 99.0
DYD3_k127_5618169_0 Aldehyde dehydrogenase family K00294 - 1.2.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004591 548.0
DYD3_k127_5618169_1 Aminotransferase class-III K00823 - 2.6.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 515.0
DYD3_k127_5618169_2 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001645 500.0
DYD3_k127_5618169_3 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K15372 - 2.6.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000216 385.0
DYD3_k127_5618169_4 Threonine dehydratase K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000001022 241.0
DYD3_k127_5618169_5 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000008427 218.0
DYD3_k127_5618169_6 lipopolysaccharide transmembrane transporter activity K07058,K18979 - 1.17.99.6 0.00000000000000000000004943 110.0
DYD3_k127_5618169_7 GDSL-like Lipase/Acylhydrolase family - - - 0.000000000000000005966 96.0
DYD3_k127_5618169_8 Amino acid permease K03294 - - 0.00000000000001229 75.0
DYD3_k127_5627949_0 elongation factor G K02355 - - 2.258e-196 643.0
DYD3_k127_5627949_1 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000006066 184.0
DYD3_k127_5627949_2 Pilus assembly protein K02662 - - 0.0004139 54.0
DYD3_k127_5648323_0 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007112 436.0
DYD3_k127_5648323_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001519 393.0
DYD3_k127_5648323_10 Tetratricopeptide repeat - - - 0.000000000000000000000000001195 128.0
DYD3_k127_5648323_11 Preprotein translocase, YajC subunit K03210 - - 0.0000000008037 64.0
DYD3_k127_5648323_12 response regulator - - - 0.000003728 59.0
DYD3_k127_5648323_2 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001527 369.0
DYD3_k127_5648323_3 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 339.0
DYD3_k127_5648323_4 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 334.0
DYD3_k127_5648323_5 PFAM glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002522 265.0
DYD3_k127_5648323_6 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.0000000000000000000000000000000000000000000000000000000000000000000007605 247.0
DYD3_k127_5648323_7 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000001415 233.0
DYD3_k127_5648323_8 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000004503 183.0
DYD3_k127_5648323_9 Pfam Glycosyl transferase family 2 K00721 - 2.4.1.83 0.0000000000000000000000000000000000000000005124 162.0
DYD3_k127_5660820_0 PFAM Prolyl oligopeptidase family - - - 2.208e-301 941.0
DYD3_k127_5660820_1 Penicillin-binding protein, dimerisation domain K03587 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002734 488.0
DYD3_k127_5660820_10 Thioredoxin-like - - - 0.0000000000004719 83.0
DYD3_k127_5660820_11 - - - - 0.000000000005979 73.0
DYD3_k127_5660820_12 Ribbon-helix-helix protein, copG family - - - 0.000000004147 63.0
DYD3_k127_5660820_13 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic - - - 0.00003213 56.0
DYD3_k127_5660820_14 Domain of unknown function (DUF4143) K07133 - - 0.0003393 50.0
DYD3_k127_5660820_2 Peptidase dimerisation domain K01436 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001451 350.0
DYD3_k127_5660820_3 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 292.0
DYD3_k127_5660820_4 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000005567 273.0
DYD3_k127_5660820_5 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000008203 250.0
DYD3_k127_5660820_6 Belongs to the MraZ family K03925 - - 0.0000000000000000000000000000000000000000001125 164.0
DYD3_k127_5660820_7 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000004777 168.0
DYD3_k127_5660820_8 Thioredoxin-like - - - 0.000000000000000000000000000000528 132.0
DYD3_k127_5660820_9 Belongs to the MraZ family K03925 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.000000000000000000000000000001382 126.0
DYD3_k127_5701874_0 Peptidase family M49 - - - 3.733e-221 713.0
DYD3_k127_5701874_1 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 2.783e-198 665.0
DYD3_k127_5701874_10 guanyl-nucleotide exchange factor activity - - - 0.000000001139 72.0
DYD3_k127_5701874_2 peptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009919 362.0
DYD3_k127_5701874_3 polysaccharide catabolic process K01179 - 3.2.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004343 314.0
DYD3_k127_5701874_4 Peptidase M4 K01400 GO:0005575,GO:0005576 3.4.24.28 0.00000000000000000000000000000000000000000001039 179.0
DYD3_k127_5701874_5 Ankyrin repeat - - - 0.0000000000000000000000000000000000000007975 167.0
DYD3_k127_5701874_6 alpha/beta hydrolase fold K06889 - - 0.00000000000000000000000000001749 136.0
DYD3_k127_5701874_7 helix_turn_helix gluconate operon transcriptional repressor K07978 - - 0.0000000000000000000000000572 119.0
DYD3_k127_5701874_9 D-alanyl-D-alanine carboxypeptidase - - - 0.0000000004979 63.0
DYD3_k127_5711671_0 Cytochrome c3 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003305 381.0
DYD3_k127_5711671_1 Putative neutral zinc metallopeptidase K07054 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000211 341.0
DYD3_k127_5711671_10 Cache domain - - - 0.0000000000000000000000000000000000000000000000007768 196.0
DYD3_k127_5711671_11 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.00000000000000000000000000000000000000000000001979 184.0
DYD3_k127_5711671_12 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K07083,K11785 - - 0.00000000000000000000000000000000000000000001393 165.0
DYD3_k127_5711671_13 DnaJ molecular chaperone homology domain - - - 0.0000000000000000000000000039 128.0
DYD3_k127_5711671_14 von Willebrand factor, type A K07114 - - 0.0000000000000000004738 100.0
DYD3_k127_5711671_15 helix_turn_helix, cAMP Regulatory protein K10914 GO:0000166,GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006109,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010565,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010675,GO:0016020,GO:0017076,GO:0019219,GO:0019222,GO:0030312,GO:0030551,GO:0030552,GO:0030554,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0032993,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043565,GO:0044212,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0062012,GO:0065007,GO:0071944,GO:0080090,GO:0097159,GO:0097367,GO:0140110,GO:1901265,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2000874,GO:2001141 - 0.00000000000000004445 93.0
DYD3_k127_5711671_17 Redoxin - - - 0.00000000003807 70.0
DYD3_k127_5711671_18 multi-organism process K03195 - - 0.0000000005713 68.0
DYD3_k127_5711671_19 Mo-molybdopterin cofactor metabolic process K03753,K07588 - - 0.00000003676 63.0
DYD3_k127_5711671_2 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 GO:0003674,GO:0003824,GO:0006091,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009055,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0018130,GO:0019438,GO:0022900,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0052693,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.17.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 342.0
DYD3_k127_5711671_20 Domain of unknown function (DUF4126) - - - 0.000005315 56.0
DYD3_k127_5711671_21 PilZ domain K19291 - 2.4.1.33 0.0001482 51.0
DYD3_k127_5711671_22 N-acetylmuramoyl-L-alanine amidase K01448 GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 3.5.1.28 0.0002149 52.0
DYD3_k127_5711671_3 Dihydrodipicolinate reductase, N-terminus K21672 - 1.4.1.12,1.4.1.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000581 325.0
DYD3_k127_5711671_4 Domain of unknown function (DUF4162) K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003508 319.0
DYD3_k127_5711671_5 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001735 299.0
DYD3_k127_5711671_6 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002819 298.0
DYD3_k127_5711671_7 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000052 267.0
DYD3_k127_5711671_8 denitrification pathway - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001221 265.0
DYD3_k127_5711671_9 - - - - 0.0000000000000000000000000000000000000000000000002531 180.0
DYD3_k127_5732628_0 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791,K13019 - 5.1.3.14,5.1.3.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004001 388.0
DYD3_k127_5732628_1 polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005523 336.0
DYD3_k127_5732628_2 Membrane protein involved in the export of O-antigen and teichoic acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001353 299.0
DYD3_k127_5732628_3 Heparinase II/III N-terminus - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001037 282.0
DYD3_k127_5732628_4 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002066 260.0
DYD3_k127_5733859_0 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001513 555.0
DYD3_k127_5733859_1 Amidohydrolase family K01466 - 3.5.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006671 506.0
DYD3_k127_5733859_2 Belongs to the HpcH HpaI aldolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006681 404.0
DYD3_k127_5733859_3 Belongs to the allantoicase family K01477 - 3.5.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007728 372.0
DYD3_k127_5733859_4 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000004024 243.0
DYD3_k127_5733859_5 OHCU decarboxylase K16840 - 4.1.1.97 0.0000000000000000000000000000000000000000000004922 171.0
DYD3_k127_5733859_6 Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily K07127 - 3.5.2.17 0.0000000000000000000000000000000000000009008 154.0
DYD3_k127_5733859_7 MafB19-like deaminase - - - 0.0000000000000000000000000000000000009524 148.0
DYD3_k127_5733859_8 Histidine kinase - - - 0.0000000000000000000706 96.0
DYD3_k127_5733859_9 Protein tyrosine kinase K12132 - 2.7.11.1 0.0000000009616 64.0
DYD3_k127_5743449_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 1.733e-258 812.0
DYD3_k127_5743449_1 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 475.0
DYD3_k127_5743449_2 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796,K13941 - 2.5.1.15,2.7.6.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000429 314.0
DYD3_k127_5743449_3 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007838 295.0
DYD3_k127_5743449_4 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000002732 241.0
DYD3_k127_5743449_5 Belongs to the ALAD family K01698 GO:0000287,GO:0003674,GO:0003824,GO:0004655,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0030312,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.2.1.24 0.000000000000000000000000000000000000000000000000000000000000000002953 231.0
DYD3_k127_5743449_6 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.000000000000000000000000000000000000000000000000000007749 204.0
DYD3_k127_5743449_7 PFAM YbbR family protein - - - 0.000000000000000000000000000000000000000007681 166.0
DYD3_k127_5743449_8 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.00000000000000000000000000000000000000002089 160.0
DYD3_k127_5778361_0 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000158 408.0
DYD3_k127_5778361_1 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000603 323.0
DYD3_k127_5778361_10 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.00000000000000000000004324 106.0
DYD3_k127_5778361_2 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002721 327.0
DYD3_k127_5778361_3 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001283 309.0
DYD3_k127_5778361_4 UbiA prenyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 295.0
DYD3_k127_5778361_5 Phosphate acetyl/butaryl transferase K00625,K13788 - 2.3.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002179 299.0
DYD3_k127_5778361_6 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000005748 206.0
DYD3_k127_5778361_7 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00000000000000000000000000000000000003082 145.0
DYD3_k127_5778361_8 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.00000000000000000000000000000006924 133.0
DYD3_k127_5778361_9 Probable zinc-ribbon domain - - - 0.00000000000000000000001151 104.0
DYD3_k127_5823751_0 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002203 488.0
DYD3_k127_5823751_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003709 361.0
DYD3_k127_5823751_10 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.000000000001619 75.0
DYD3_k127_5823751_11 Ribosomal protein L34 K02914 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000004024 64.0
DYD3_k127_5823751_12 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.0000003882 60.0
DYD3_k127_5823751_2 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007029 319.0
DYD3_k127_5823751_3 PFAM Cobyrinic acid ac-diamide synthase K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003671 315.0
DYD3_k127_5823751_4 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002114 267.0
DYD3_k127_5823751_5 Belongs to the ParB family K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000005019 235.0
DYD3_k127_5823751_6 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.000000000000000000000000000000000000000000000000000000000001525 214.0
DYD3_k127_5823751_7 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0071944,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.00000000000000000000000000000000003338 148.0
DYD3_k127_5823751_8 Polymer-forming cytoskeletal - - - 0.000000000000000000001319 98.0
DYD3_k127_5823751_9 PFAM single-stranded nucleic acid binding R3H domain protein K06346 - - 0.000000000000003555 89.0
DYD3_k127_5844862_0 cellulose binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004236 488.0
DYD3_k127_5844862_1 ADP-glyceromanno-heptose 6-epimerase activity K01710,K08678 - 4.1.1.35,4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003539 466.0
DYD3_k127_5844862_10 curli production assembly transport component CsgG - - - 0.0000000000000000000000000007115 130.0
DYD3_k127_5844862_11 RNA recognition motif - - - 0.0000000000000000000007497 99.0
DYD3_k127_5844862_12 ThiS family K03636 - - 0.00000000000000000006819 96.0
DYD3_k127_5844862_13 ribonuclease BN - - - 0.0000000006424 72.0
DYD3_k127_5844862_14 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00000001443 63.0
DYD3_k127_5844862_2 Bacterial sugar transferase K03606 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002586 450.0
DYD3_k127_5844862_3 Succinylglutamate desuccinylase / Aspartoacylase family K06987 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004289 332.0
DYD3_k127_5844862_4 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002436 290.0
DYD3_k127_5844862_5 DnaJ molecular chaperone homology domain K05516 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004383 263.0
DYD3_k127_5844862_6 AI-2E family transporter K03548 - - 0.0000000000000000000000000000000000000000000000000006413 198.0
DYD3_k127_5844862_7 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000007308 166.0
DYD3_k127_5844862_8 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K08744 - 2.7.8.41 0.00000000000000000000000000002403 128.0
DYD3_k127_5844862_9 Cytidylate kinase-like family - - - 0.0000000000000000000000000001381 128.0
DYD3_k127_5859873_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 1.716e-315 984.0
DYD3_k127_5859873_1 AcrB/AcrD/AcrF family K07787 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002318 424.0
DYD3_k127_5859873_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798,K15727 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000295 323.0
DYD3_k127_5859873_3 Protein of unknown function (DUF808) K09781 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006106 311.0
DYD3_k127_5859873_4 - - - - 0.0000000000000000000000000000000000000000000000000000000309 210.0
DYD3_k127_5859873_5 negative regulation of transcription, DNA-templated K21600 - - 0.00000000000000001008 88.0
DYD3_k127_5859873_6 Heavy-metal-associated domain - - - 0.000000003354 63.0
DYD3_k127_5877819_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657,K13503 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001451 445.0
DYD3_k127_5877819_1 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004645 336.0
DYD3_k127_5877819_2 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 - 2.4.2.18,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002286 316.0
DYD3_k127_5877819_3 TIGRFAM glutamine amidotransferase of anthranilate synthase K01658 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001885 275.0
DYD3_k127_5877819_4 TIGRFAM Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 - 5.3.1.16 0.00000000000000000000000000000000000000000000000000000000000004601 232.0
DYD3_k127_5877819_5 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.0000000000000000000000000000000000000000000000000000000000001958 221.0
DYD3_k127_5877819_6 Belongs to the TrpC family K01609,K13498 - 4.1.1.48,5.3.1.24 0.000000000000000000000000000000000000000000000000000000005827 216.0
DYD3_k127_5877819_7 Phosphoribosyl-AMP cyclohydrolase K01496,K11755 - 3.5.4.19,3.6.1.31 0.00000000000000000000000000000000000000000000000001087 191.0
DYD3_k127_5877819_8 imidazoleglycerol-phosphate dehydratase K01693 GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.19 0.000000000000000002733 85.0
DYD3_k127_5877819_9 Belongs to the TrpF family K01817 - 5.3.1.24 0.00000000000004755 80.0
DYD3_k127_5882934_0 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.00000000000000000000000000000000000000000000004446 174.0
DYD3_k127_5882934_1 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.00000000000000000000000000000000000000000003257 185.0
DYD3_k127_5882934_2 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000003418 162.0
DYD3_k127_5882934_3 Tetratricopeptide repeat - - - 0.0000000000000006688 91.0
DYD3_k127_5882934_4 glutamate synthase, alpha subunit domain protein K00284 - 1.4.7.1 0.0000000000005997 70.0
DYD3_k127_5882934_5 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 0.000000001628 68.0
DYD3_k127_5890513_0 TonB dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 615.0
DYD3_k127_5890513_1 Formylmethanofuran-tetrahydromethanopterin formyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002742 473.0
DYD3_k127_5890513_10 Bacterial regulatory proteins, tetR family - - - 0.0000001086 55.0
DYD3_k127_5890513_2 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.00000000000000000000000000000000000000000000000000000000000000000006254 242.0
DYD3_k127_5890513_3 Endonuclease Exonuclease Phosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000005069 217.0
DYD3_k127_5890513_4 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000891 211.0
DYD3_k127_5890513_5 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.00000000000000000000000000000000000000000000000000000000003293 221.0
DYD3_k127_5890513_6 ArsR family transcriptional regulator - - - 0.000000000000000000000000000000000000000000000004146 175.0
DYD3_k127_5890513_7 YCII-related domain - - - 0.00000000000000000000000000000000000000000006488 168.0
DYD3_k127_5890513_8 Sigma-70 region 2 K03088 - - 0.00000000000000008157 86.0
DYD3_k127_5890513_9 Flagellar rod assembly protein muramidase FlgJ - - - 0.0000000000000003667 91.0
DYD3_k127_5913893_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008178 538.0
DYD3_k127_5913893_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003045 485.0
DYD3_k127_5913893_10 Protein of unknown function (DUF3187) - - - 0.000005192 59.0
DYD3_k127_5913893_2 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 380.0
DYD3_k127_5913893_3 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003415 362.0
DYD3_k127_5913893_4 Maf-like protein K06287 - - 0.00000000000000000000000000000000000000005512 166.0
DYD3_k127_5913893_5 Menaquinol oxidoreductase complex Cbc4, cytochrome c subunit - - - 0.00000000000000000000000000000000007136 138.0
DYD3_k127_5913893_6 Methyltransferase FkbM domain - - - 0.00000000000000000000005142 108.0
DYD3_k127_5913893_7 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.000000000007199 77.0
DYD3_k127_5913893_8 Transcriptional regulatory protein, C terminal - - - 0.000000336 61.0
DYD3_k127_5916594_0 Carbamoyltransferase C-terminus K00612 - - 1.321e-239 755.0
DYD3_k127_5916594_1 PFAM AAA ATPase central domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002552 287.0
DYD3_k127_5916594_2 PFAM Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000000000000024 250.0
DYD3_k127_5916594_3 arylsulfatase activity - - - 0.000000000000000000000000000000000000000000000000000000062 215.0
DYD3_k127_5916594_4 histone H2A K63-linked ubiquitination K10914 - - 0.00000000000000000000000000000000005483 145.0
DYD3_k127_5916594_5 PQQ enzyme repeat - - - 0.000000000000000000000000000006596 135.0
DYD3_k127_5916594_6 - - - - 0.0000000000000000000000000273 124.0
DYD3_k127_5916594_7 dTDP-4-dehydrorhamnose reductase K00067 - 1.1.1.133 0.00000000000000003675 85.0
DYD3_k127_5916594_8 - - - - 0.00000000000004871 78.0
DYD3_k127_5916594_9 - - - - 0.000119 49.0
DYD3_k127_5925152_0 PFAM NAD-dependent epimerase dehydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007348 596.0
DYD3_k127_5925152_1 PFAM CoA-binding domain protein K06929 - - 0.00000000000000000000000000000000000000000000000000000000000000000729 228.0
DYD3_k127_5925152_2 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000002226 232.0
DYD3_k127_5925152_3 glyoxalase III activity - - - 0.000000000000000000000000000000000000000000000000000000004285 202.0
DYD3_k127_5925152_4 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000000000000009675 160.0
DYD3_k127_5925152_5 - - - - 0.000000000000000000002246 105.0
DYD3_k127_5925152_6 - - - - 0.000008955 54.0
DYD3_k127_5927751_0 Carbamoyl-phosphate synthetase ammonia chain K01955 - 6.3.5.5 0.0 1096.0
DYD3_k127_5927751_1 Carbamoyl-phosphate synthase small chain, CPSase domain K01956 - 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004005 454.0
DYD3_k127_5927751_2 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000008416 182.0
DYD3_k127_5927751_3 RDD family - - - 0.000001727 58.0
DYD3_k127_5938151_0 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639,K20967 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016020,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0030312,GO:0040007,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0071944,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.22,4.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001458 340.0
DYD3_k127_5938151_1 PFAM response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003253 267.0
DYD3_k127_5938151_10 Psort location Cytoplasmic, score 8.96 - - - 0.000000002331 70.0
DYD3_k127_5938151_2 Bacterial regulatory proteins, tetR family K16137 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000912 249.0
DYD3_k127_5938151_3 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000153 231.0
DYD3_k127_5938151_4 PFAM WD40 domain protein beta Propeller - - - 0.000000000000000000000000000000000000000000000000000000000009548 222.0
DYD3_k127_5938151_5 MoaE protein K21142 - 2.8.1.12 0.000000000000000000000000000000000000000001587 159.0
DYD3_k127_5938151_6 LR COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - - - 0.0000000000000000000000000000000000009195 149.0
DYD3_k127_5938151_7 Histidine kinase - - - 0.000000000000000004837 86.0
DYD3_k127_5938151_8 ThiS family K03636,K21142 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.8.1.12 0.0000000000001414 73.0
DYD3_k127_5938151_9 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000007151 79.0
DYD3_k127_5957354_0 FtsX-like permease family K02004 - - 1.486e-234 757.0
DYD3_k127_5957354_1 Pfam SNARE associated Golgi protein - - - 7.2e-227 722.0
DYD3_k127_5957354_2 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001847 347.0
DYD3_k127_5957354_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002508 323.0
DYD3_k127_5957354_4 DinB superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002544 290.0
DYD3_k127_5957354_5 Phosphoenolpyruvate carboxylase K01595 GO:0003674,GO:0003824,GO:0004611,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008964,GO:0016829,GO:0016830,GO:0016831,GO:0044424,GO:0044444,GO:0044464 4.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000001475 278.0
DYD3_k127_5957354_6 Protein of unknown function (DUF456) K09793 - - 0.0000000000000000000000005155 113.0
DYD3_k127_5962099_0 Oxidoreductase - - - 1.009e-265 828.0
DYD3_k127_5962099_1 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003127 628.0
DYD3_k127_5962099_10 Carboxylesterase family - - - 0.0000000000000000000000000000000000000000000000000000002476 203.0
DYD3_k127_5962099_11 serine threonine protein kinase K08884,K12132 GO:0002237,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005539,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009617,GO:0009719,GO:0009847,GO:0009987,GO:0010033,GO:0010243,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0023052,GO:0032494,GO:0032502,GO:0036211,GO:0042221,GO:0042834,GO:0043170,GO:0043207,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051704,GO:0051707,GO:0051716,GO:0065007,GO:0070887,GO:0071216,GO:0071219,GO:0071224,GO:0071310,GO:0071417,GO:0071495,GO:0071704,GO:0071944,GO:0097367,GO:0140096,GO:1901564,GO:1901698,GO:1901699,GO:1901700,GO:1901701 2.7.11.1 0.00000000000000000000000000000000000000000000000000007102 200.0
DYD3_k127_5962099_12 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.00000000000000000000000000000000000000000000001261 190.0
DYD3_k127_5962099_13 - - - - 0.000000000000000000000000000000000000000000001133 170.0
DYD3_k127_5962099_14 PAS domain - - - 0.00000000000000000000000000000000000000000005132 170.0
DYD3_k127_5962099_15 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.00000001108 62.0
DYD3_k127_5962099_16 C4-type zinc ribbon domain K07164 - - 0.00001529 52.0
DYD3_k127_5962099_17 Water Stress and Hypersensitive response - - - 0.0001225 52.0
DYD3_k127_5962099_2 Peptidase family S58 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002544 418.0
DYD3_k127_5962099_3 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02481 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002469 351.0
DYD3_k127_5962099_4 PFAM NADH Ubiquinone plastoquinone (complex I) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002297 323.0
DYD3_k127_5962099_5 arylsulfatase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 318.0
DYD3_k127_5962099_6 Domain of Unknown Function (DUF1080) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003059 279.0
DYD3_k127_5962099_7 Phosphoribosyl-ATP pyrophosphohydrolase K02499,K04765 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006213,GO:0006220,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009147,GO:0009149,GO:0009151,GO:0009155,GO:0009164,GO:0009166,GO:0009199,GO:0009200,GO:0009203,GO:0009204,GO:0009208,GO:0009210,GO:0009211,GO:0009213,GO:0009215,GO:0009217,GO:0009218,GO:0009219,GO:0009222,GO:0009223,GO:0009259,GO:0009261,GO:0009262,GO:0009264,GO:0009267,GO:0009394,GO:0009605,GO:0009987,GO:0009991,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0019693,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042454,GO:0042594,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0046046,GO:0046047,GO:0046051,GO:0046052,GO:0046060,GO:0046061,GO:0046070,GO:0046075,GO:0046076,GO:0046080,GO:0046081,GO:0046131,GO:0046133,GO:0046135,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0050896,GO:0051716,GO:0055086,GO:0071496,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658 3.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000006851 271.0
DYD3_k127_5962099_8 Catalytic LigB subunit of aromatic ring-opening dioxygenase K15777 - - 0.000000000000000000000000000000000000000000000000000000000000000000001081 247.0
DYD3_k127_5962099_9 Gluconate 2-dehydrogenase subunit 3 - - - 0.0000000000000000000000000000000000000000000000000000000000000198 220.0
DYD3_k127_5985167_0 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002519 355.0
DYD3_k127_5985167_1 TonB-dependent Receptor Plug Domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000003462 260.0
DYD3_k127_5985167_2 Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety K00453 GO:0003674,GO:0003824,GO:0004833,GO:0005488,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016043,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019441,GO:0019752,GO:0020037,GO:0022607,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043436,GO:0043933,GO:0044085,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046906,GO:0048037,GO:0051213,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0070189,GO:0071704,GO:0071840,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.13.11.11 0.0000000000000000000000000000000000000000000000000000000000001666 222.0
DYD3_k127_5985167_3 Domain of unknown function (DUF4154) - - - 0.000000000000000002326 92.0
DYD3_k127_5985167_4 Carboxypeptidase regulatory-like domain - - - 0.00000000000006313 82.0
DYD3_k127_5989301_0 Peptidase D K06106,K14213 GO:0003674,GO:0003824,GO:0004177,GO:0004180,GO:0004181,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006082,GO:0006508,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0008239,GO:0009987,GO:0016787,GO:0019538,GO:0019752,GO:0031974,GO:0031981,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0070011,GO:0070013,GO:0071704,GO:0140096,GO:1901564 3.4.13.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004284 541.0
DYD3_k127_5989301_1 Carbon-nitrogen hydrolase K12251 - 3.5.1.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 471.0
DYD3_k127_5989301_2 Dihydroorotate dehydrogenase K17723 GO:0003674,GO:0003824,GO:0003954,GO:0006139,GO:0006206,GO:0006208,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009112,GO:0009987,GO:0016491,GO:0016651,GO:0034641,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0046113,GO:0046483,GO:0046700,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072529,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575 1.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002029 400.0
DYD3_k127_5989301_3 PFAM Sodium sulphate symporter K14445 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007503 327.0
DYD3_k127_5989301_4 Peptidase family M3 K01284 - 3.4.15.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004769 275.0
DYD3_k127_5989301_5 Inositol monophosphatase K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000001104 244.0
DYD3_k127_5989301_6 NAD ADP-ribosyltransferase activity. It is involved in the biological process described with protein ADP-ribosylation K10798 GO:0000002,GO:0000003,GO:0000122,GO:0000166,GO:0000228,GO:0000302,GO:0000303,GO:0000305,GO:0000715,GO:0000723,GO:0000724,GO:0000725,GO:0000785,GO:0000790,GO:0000791,GO:0000976,GO:0000977,GO:0000981,GO:0001012,GO:0001067,GO:0001228,GO:0001817,GO:0001818,GO:0002009,GO:0002064,GO:0002065,GO:0002066,GO:0002225,GO:0002376,GO:0002520,GO:0002521,GO:0002573,GO:0002682,GO:0002684,GO:0002697,GO:0002699,GO:0002700,GO:0002702,GO:0002759,GO:0002760,GO:0002784,GO:0002786,GO:0002791,GO:0002792,GO:0002803,GO:0002805,GO:0002807,GO:0002808,GO:0002831,GO:0002833,GO:0002920,GO:0002922,GO:0003002,GO:0003006,GO:0003254,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003690,GO:0003700,GO:0003824,GO:0003909,GO:0003910,GO:0003950,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005667,GO:0005694,GO:0005700,GO:0005703,GO:0005719,GO:0005730,GO:0005737,GO:0005739,GO:0006139,GO:0006140,GO:0006163,GO:0006259,GO:0006260,GO:0006261,GO:0006266,GO:0006271,GO:0006273,GO:0006281,GO:0006282,GO:0006284,GO:0006289,GO:0006293,GO:0006294,GO:0006296,GO:0006302,GO:0006310,GO:0006351,GO:0006355,GO:0006357,GO:0006366,GO:0006464,GO:0006471,GO:0006508,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0006950,GO:0006952,GO:0006955,GO:0006963,GO:0006974,GO:0006979,GO:0006996,GO:0006997,GO:0007000,GO:0007005,GO:0007154,GO:0007163,GO:0007165,GO:0007166,GO:0007167,GO:0007178,GO:0007179,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007389,GO:0007552,GO:0007610,GO:0008069,GO:0008104,GO:0008134,GO:0008150,GO:0008152,GO:0008219,GO:0009058,GO:0009059,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009266,GO:0009303,GO:0009314,GO:0009408,GO:0009410,GO:0009411,GO:0009416,GO:0009628,GO:0009653,GO:0009719,GO:0009725,GO:0009798,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009950,GO:0009953,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010043,GO:0010212,GO:0010243,GO:0010332,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010563,GO:0010604,GO:0010605,GO:0010611,GO:0010613,GO:0010628,GO:0010629,GO:0010639,GO:0010646,GO:0010647,GO:0010941,GO:0010942,GO:0010990,GO:0012501,GO:0012505,GO:0014070,GO:0014742,GO:0014743,GO:0015030,GO:0016043,GO:0016070,GO:0016072,GO:0016333,GO:0016334,GO:0016485,GO:0016540,GO:0016604,GO:0016740,GO:0016757,GO:0016763,GO:0016874,GO:0016886,GO:0017144,GO:0018130,GO:0018193,GO:0018209,GO:0018312,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019899,GO:0019900,GO:0019901,GO:0019953,GO:0022412,GO:0022414,GO:0022607,GO:0022616,GO:0023019,GO:0023051,GO:0023052,GO:0023056,GO:0030097,GO:0030099,GO:0030154,GO:0030225,GO:0030331,GO:0030534,GO:0030575,GO:0030576,GO:0030707,GO:0030808,GO:0030809,GO:0030855,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031334,GO:0031347,GO:0031349,GO:0031960,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032042,GO:0032101,GO:0032103,GO:0032200,GO:0032204,GO:0032205,GO:0032501,GO:0032502,GO:0032504,GO:0032507,GO:0032660,GO:0032700,GO:0032774,GO:0032868,GO:0032869,GO:0032870,GO:0032879,GO:0032880,GO:0032991,GO:0032993,GO:0033036,GO:0033043,GO:0033044,GO:0033143,GO:0033145,GO:0033146,GO:0033148,GO:0033365,GO:0033554,GO:0033683,GO:0033993,GO:0034248,GO:0034250,GO:0034504,GO:0034599,GO:0034605,GO:0034613,GO:0034614,GO:0034622,GO:0034641,GO:0034644,GO:0034645,GO:0034654,GO:0034660,GO:0035079,GO:0035080,GO:0035257,GO:0035258,GO:0035363,GO:0036094,GO:0036211,GO:0040008,GO:0040009,GO:0042220,GO:0042221,GO:0042391,GO:0042393,GO:0042493,GO:0042592,GO:0042769,GO:0042802,GO:0042826,GO:0042981,GO:0043067,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043279,GO:0043388,GO:0043412,GO:0043434,GO:0043484,GO:0043502,GO:0043504,GO:0043523,GO:0043565,GO:0043900,GO:0043902,GO:0043933,GO:0044030,GO:0044057,GO:0044085,GO:0044087,GO:0044089,GO:0044093,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044703,GO:0045087,GO:0045185,GO:0045595,GO:0045597,GO:0045739,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045936,GO:0045944,GO:0045980,GO:0046034,GO:0046332,GO:0046483,GO:0047485,GO:0048037,GO:0048148,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048545,GO:0048583,GO:0048584,GO:0048609,GO:0048729,GO:0048731,GO:0048856,GO:0048869,GO:0048878,GO:0050662,GO:0050707,GO:0050708,GO:0050709,GO:0050710,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050801,GO:0050879,GO:0050881,GO:0050882,GO:0050896,GO:0051046,GO:0051048,GO:0051049,GO:0051051,GO:0051052,GO:0051053,GO:0051054,GO:0051094,GO:0051098,GO:0051099,GO:0051101,GO:0051103,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051223,GO:0051224,GO:0051235,GO:0051239,GO:0051240,GO:0051241,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051287,GO:0051385,GO:0051427,GO:0051457,GO:0051604,GO:0051606,GO:0051641,GO:0051651,GO:0051704,GO:0051716,GO:0051881,GO:0051900,GO:0051901,GO:0055086,GO:0060249,GO:0060255,GO:0060341,GO:0060359,GO:0060390,GO:0060391,GO:0060429,GO:0062012,GO:0062014,GO:0065003,GO:0065004,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070201,GO:0070212,GO:0070412,GO:0070727,GO:0070848,GO:0070887,GO:0070911,GO:0071214,GO:0071241,GO:0071248,GO:0071294,GO:0071310,GO:0071363,GO:0071375,GO:0071417,GO:0071450,GO:0071451,GO:0071478,GO:0071482,GO:0071495,GO:0071559,GO:0071560,GO:0071704,GO:0071824,GO:0071840,GO:0072347,GO:0072521,GO:0072595,GO:0080090,GO:0080134,GO:0080135,GO:0090087,GO:0090092,GO:0090100,GO:0090257,GO:0090304,GO:0090305,GO:0097159,GO:0097305,GO:0097659,GO:0098687,GO:0098781,GO:0104004,GO:0140096,GO:0140097,GO:0140110,GO:1900180,GO:1900182,GO:1900371,GO:1900372,GO:1900407,GO:1900424,GO:1900426,GO:1900542,GO:1900543,GO:1901135,GO:1901214,GO:1901216,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901576,GO:1901652,GO:1901653,GO:1901654,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902175,GO:1902531,GO:1902679,GO:1902680,GO:1902882,GO:1903201,GO:1903203,GO:1903376,GO:1903506,GO:1903507,GO:1903508,GO:1903516,GO:1903518,GO:1903530,GO:1903531,GO:1903578,GO:1903579,GO:1903827,GO:1903829,GO:1904044,GO:1904181,GO:1904356,GO:1904357,GO:1904645,GO:1904646,GO:1904760,GO:1904762,GO:1904950,GO:1905076,GO:1905077,GO:1990404,GO:1990837,GO:1990966,GO:2000112,GO:2000113,GO:2000677,GO:2000679,GO:2001020,GO:2001022,GO:2001141,GO:2001169,GO:2001170,GO:2001233,GO:2001242,GO:2001251 2.4.2.30 0.0000000003406 67.0
DYD3_k127_6007880_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 9.42e-289 908.0
DYD3_k127_6007880_1 NAD binding K00333,K13378 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001128 475.0
DYD3_k127_6007880_10 formate dehydrogenase K00127,K08350 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006082,GO:0006091,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009326,GO:0009987,GO:0015942,GO:0015944,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016903,GO:0016999,GO:0017144,GO:0019752,GO:0020037,GO:0022900,GO:0031224,GO:0031226,GO:0032787,GO:0032991,GO:0033554,GO:0036397,GO:0043436,GO:0044237,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046906,GO:0048037,GO:0050896,GO:0051716,GO:0052738,GO:0055114,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1902494 - 0.0000000000000000000000000000000000000000001115 168.0
DYD3_k127_6007880_11 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.0000000000000000000000000000000000000000001259 175.0
DYD3_k127_6007880_12 PIN domain - - - 0.000000000000000000000000000000000000000002935 162.0
DYD3_k127_6007880_13 Glyoxalase bleomycin resistance - - - 0.0000000000000000000000000000000000000001153 154.0
DYD3_k127_6007880_14 NADH dehydrogenase (ubiquinone) activity K00330,K05574 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0050136,GO:0055114,GO:0098796,GO:1902494 1.6.5.3 0.00000000000000000000000000000001959 137.0
DYD3_k127_6007880_15 Phage integrase family - - - 0.000000000000000000000000000004303 135.0
DYD3_k127_6007880_16 protein involved in formate dehydrogenase formation K02380 - - 0.00000000000000000000000001671 119.0
DYD3_k127_6007880_17 Integrase core domain K07497 - - 0.0000000000000000000000005315 109.0
DYD3_k127_6007880_18 Helix-turn-helix domain - - - 0.0002835 49.0
DYD3_k127_6007880_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337,K05572 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0008137,GO:0008150,GO:0008152,GO:0009987,GO:0015980,GO:0016491,GO:0016651,GO:0016655,GO:0044237,GO:0045333,GO:0050136,GO:0055114 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002977 342.0
DYD3_k127_6007880_3 Formate dehydrogenase N, transmembrane K00124 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001451 331.0
DYD3_k127_6007880_4 amino acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006835 306.0
DYD3_k127_6007880_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000001249 257.0
DYD3_k127_6007880_6 Molybdopterin oxidoreductase Fe4S4 domain K00123 - 1.17.1.9 0.0000000000000000000000000000000000000000000000000000000000000000003291 244.0
DYD3_k127_6007880_7 Belongs to the iron ascorbate-dependent oxidoreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000001464 240.0
DYD3_k127_6007880_8 PQQ-like domain - - - 0.0000000000000000000000000000000000000000000000000000000003447 219.0
DYD3_k127_6007880_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338,K03615,K05580 - 1.6.5.3 0.000000000000000000000000000000000000000000001976 169.0
DYD3_k127_6009840_0 Evidence 4 Homologs of previously reported genes of - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 358.0
DYD3_k127_6009840_1 - - - - 0.000000000000000000000000000000000000000002452 177.0
DYD3_k127_6009840_2 - - - - 0.00000000000000003545 91.0
DYD3_k127_6009840_3 TonB-dependent Receptor Plug Domain - - - 0.00000000000007911 78.0
DYD3_k127_6009840_4 Sulfatase-modifying factor enzyme 1 - - - 0.00001312 54.0
DYD3_k127_6015395_0 Pyridoxal-dependent decarboxylase conserved domain K01593,K01634 - 4.1.1.105,4.1.1.28,4.1.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004306 532.0
DYD3_k127_6015395_1 Acyl-CoA dehydrogenase, C-terminal domain K16173 - 1.3.99.32 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003334 524.0
DYD3_k127_6015395_10 Fimbrial assembly protein (PilN) K02663 - - 0.000000000003694 73.0
DYD3_k127_6015395_2 Bacterial fructose-1,6-bisphosphatase, glpX-encoded K02446 - 3.1.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009323 427.0
DYD3_k127_6015395_3 Thiolase, C-terminal domain K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003689 421.0
DYD3_k127_6015395_4 TIGRFAM type IV pilus assembly protein PilM K02662 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001805 367.0
DYD3_k127_6015395_5 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004496 341.0
DYD3_k127_6015395_6 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001406 328.0
DYD3_k127_6015395_7 Enoyl-CoA hydratase/isomerase K01715,K07537 - 4.2.1.100,4.2.1.17 0.000000000000000000000000000000000000000000000000000000000003315 220.0
DYD3_k127_6015395_8 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.000000000000000000000000000000000000000000000000000007544 202.0
DYD3_k127_6015395_9 histone H2A K63-linked ubiquitination - - - 0.0000000000000000000000009122 117.0
DYD3_k127_605157_0 PFAM Flavin containing amine oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009698 563.0
DYD3_k127_605157_1 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 299.0
DYD3_k127_605157_2 Calcineurin-like phosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002134 270.0
DYD3_k127_605157_3 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000001251 237.0
DYD3_k127_605157_4 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0000502,GO:0002020,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009376,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0019899,GO:0019904,GO:0030163,GO:0030164,GO:0030554,GO:0031597,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043335,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051301,GO:0051704,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0097718,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1904949,GO:1905368,GO:1905369 - 0.0000000000000000007227 89.0
DYD3_k127_6052377_0 Belongs to the MurCDEF family K02558 - 6.3.2.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006113 436.0
DYD3_k127_6052377_1 Trypsin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003926 366.0
DYD3_k127_6052377_2 TonB-dependent receptor K02014 - - 0.0000000000000000000000000000000000000002613 172.0
DYD3_k127_6067657_0 transport - - - 1.619e-266 861.0
DYD3_k127_6067657_1 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 3.745e-199 629.0
DYD3_k127_6067657_10 PFAM GGDEF domain containing protein - - - 0.0000000000000000000000000000000000000000001434 175.0
DYD3_k127_6067657_11 COG0526 Thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000000000005474 110.0
DYD3_k127_6067657_12 helix_turn_helix ASNC type K03719 - - 0.000000000000000001389 92.0
DYD3_k127_6067657_13 serine-type endopeptidase activity - - - 0.0000001161 65.0
DYD3_k127_6067657_2 arylsulfatase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003286 448.0
DYD3_k127_6067657_3 Protein of unknown function (DUF1343) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004933 411.0
DYD3_k127_6067657_4 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002886 383.0
DYD3_k127_6067657_5 protein-glutamate O-methyltransferase activity K00575,K03408,K13924 - 2.1.1.80,3.1.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006869 339.0
DYD3_k127_6067657_6 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000004739 266.0
DYD3_k127_6067657_7 Cytochrome C biogenesis protein transmembrane region K06196,K12267 - 1.8.4.11,1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000000000007979 256.0
DYD3_k127_6067657_8 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000002663 222.0
DYD3_k127_6067657_9 protein histidine kinase activity K01768,K02484,K07636,K10681,K10819,K18350,K20487 - 2.7.13.3,4.6.1.1 0.0000000000000000000000000000000000000000000007062 191.0
DYD3_k127_6142893_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 4.357e-196 645.0
DYD3_k127_6142893_1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K00266 - 1.4.1.13,1.4.1.14 5.757e-195 635.0
DYD3_k127_6142893_2 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004173 438.0
DYD3_k127_6142893_3 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B K00266,K00528,K02823 - 1.18.1.2,1.19.1.1,1.4.1.13,1.4.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000207 340.0
DYD3_k127_6142893_4 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005846 266.0
DYD3_k127_6142893_5 Universal stress protein family - - - 0.000000000000000000000000000000001433 141.0
DYD3_k127_6142893_6 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000005672 126.0
DYD3_k127_6144911_0 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00520,K21739 - 1.16.1.1 1.238e-205 648.0
DYD3_k127_6144911_1 Spermidine putrescine-binding periplasmic protein K11069,K11070 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000293 490.0
DYD3_k127_6144911_10 RHS Repeat - - - 0.000000000000000000000006052 116.0
DYD3_k127_6144911_11 - - - - 0.00000000000000000000003299 109.0
DYD3_k127_6144911_12 ATP ADP translocase K03301 - - 0.000000000006356 78.0
DYD3_k127_6144911_13 Histidine kinase - - - 0.0000000005257 72.0
DYD3_k127_6144911_14 cellulase activity - - - 0.000003707 57.0
DYD3_k127_6144911_15 - - - - 0.000008394 56.0
DYD3_k127_6144911_2 COG3540 Phosphodiesterase alkaline phosphatase D K01113 - 3.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007854 416.0
DYD3_k127_6144911_3 Pfam:Gp37_Gp68 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000961 392.0
DYD3_k127_6144911_4 Prolyl oligopeptidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005576 311.0
DYD3_k127_6144911_5 PFAM binding-protein-dependent transport systems inner membrane component K11071 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008848 277.0
DYD3_k127_6144911_6 Protein of unknown function (DUF5131) - - - 0.000000000000000000000000000000000000000000000000000002679 209.0
DYD3_k127_6144911_7 TOBE domain - - - 0.000000000000000000000000000000000000000000000000003843 188.0
DYD3_k127_6144911_8 RHS Repeat - - - 0.00000000000000000000000000000000000000000006904 174.0
DYD3_k127_6144911_9 PFAM helix-turn-helix- domain containing protein, AraC type - - - 0.0000000000000000000000000000002458 134.0
DYD3_k127_6180967_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000975 552.0
DYD3_k127_6180967_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 509.0
DYD3_k127_6180967_10 Tetratricopeptide repeat - - - 0.00001066 59.0
DYD3_k127_6180967_2 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001646 334.0
DYD3_k127_6180967_3 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001862 316.0
DYD3_k127_6180967_4 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005279 291.0
DYD3_k127_6180967_5 riboflavin synthase, alpha subunit K00793 - 2.5.1.9 0.00000000000000000000000000000000000000000000000000000001379 203.0
DYD3_k127_6180967_6 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000005808 130.0
DYD3_k127_6180967_7 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000001262 105.0
DYD3_k127_6180967_8 Roadblock/LC7 domain - - - 0.000000002006 68.0
DYD3_k127_6180967_9 KH domain - - - 0.00000003507 56.0
DYD3_k127_6204429_0 Heat shock 70 kDa protein K04043 - - 2.593e-212 672.0
DYD3_k127_6204429_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003073 408.0
DYD3_k127_6204429_2 Serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005281 355.0
DYD3_k127_6204429_3 Phosphate acetyl/butaryl transferase K00625,K02028 - 2.3.1.8,3.6.3.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002912 317.0
DYD3_k127_6204429_4 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016436,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070042,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.193 0.0000000000000000000000000000000000000000133 166.0
DYD3_k127_6204429_5 Ribosomal protein L11 methyltransferase K02687 - - 0.0000000000000000000000000000000005813 141.0
DYD3_k127_6204429_6 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000002482 108.0
DYD3_k127_6211913_0 COGs COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K07713,K07714,K19641 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003164 483.0
DYD3_k127_6211913_1 Histidine kinase - - - 0.0000000000000000000000000000000000001253 144.0
DYD3_k127_6211913_2 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000002443 142.0
DYD3_k127_6211913_3 - - - - 0.0000005773 62.0
DYD3_k127_622822_0 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K00371,K16965,K17048,K17051 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.7.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 594.0
DYD3_k127_622822_1 Molybdopterin oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001291 486.0
DYD3_k127_622822_10 transcriptional regulator - - - 0.0000000000001328 77.0
DYD3_k127_622822_2 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003861 490.0
DYD3_k127_622822_3 Benzoyl-CoA reductase subunit K04114 - 1.3.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001579 337.0
DYD3_k127_622822_4 Benzoyl-CoA reductase subunit K04115 - 1.3.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005001 337.0
DYD3_k127_622822_5 KR domain K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000001251 204.0
DYD3_k127_622822_6 - - - - 0.0000000000000000000000000000000000000000000000001134 184.0
DYD3_k127_622822_7 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000006676 132.0
DYD3_k127_622822_8 - - - - 0.00000000000000003116 93.0
DYD3_k127_622822_9 Nitrate reductase delta subunit - - - 0.00000000000005726 85.0
DYD3_k127_6246311_0 Cysteine dioxygenase type I - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003702 249.0
DYD3_k127_6246311_1 Spermidine synthase K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000007689 247.0
DYD3_k127_6246311_10 PFAM Serine threonine protein kinase-related - - - 0.0000000000009361 74.0
DYD3_k127_6246311_11 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 0.00000001899 57.0
DYD3_k127_6246311_12 Protein kinase domain K08884 - 2.7.11.1 0.00002496 49.0
DYD3_k127_6246311_2 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.00000000000000000000000000000000000000000000000000000000000002866 219.0
DYD3_k127_6246311_3 HxlR-like helix-turn-helix - - - 0.000000000000000000000000000000000000000000000000000000002088 211.0
DYD3_k127_6246311_4 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000002968 223.0
DYD3_k127_6246311_5 Belongs to the UPF0403 family - - - 0.000000000000000000000000000000000000000000000002214 180.0
DYD3_k127_6246311_6 - - - - 0.00000000000000000000000000256 115.0
DYD3_k127_6246311_7 Protein kinase domain - - - 0.0000000000000000000000006148 112.0
DYD3_k127_6246311_8 Phage derived protein Gp49-like (DUF891) - - - 0.00000000000000000000009232 101.0
DYD3_k127_6246311_9 Helix-turn-helix domain - - - 0.00000000000000002217 91.0
DYD3_k127_6266748_0 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 336.0
DYD3_k127_6266748_1 peptide deformylase activity K01462 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 3.5.1.88 0.00000000000000000000000000000000000000000000004576 180.0
DYD3_k127_6266748_2 Domain of unknown function (DUF4115) K15539 - - 0.0000000000000000000000000003634 124.0
DYD3_k127_6266748_4 Large-conductance mechanosensitive channel, MscL K03282 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0032535,GO:0042592,GO:0044425,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0090066 - 0.00000000000000000001956 105.0
DYD3_k127_6266748_5 - - - - 0.00000000000000339 85.0
DYD3_k127_6266748_6 - - - - 0.000000002048 66.0
DYD3_k127_6271845_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1166.0
DYD3_k127_6271845_1 metallocarboxypeptidase activity K14054 - - 1.69e-214 692.0
DYD3_k127_6271845_10 Beta-Casp domain K07576 - - 0.00000000000000000000000000000000000000000000000000000000000000000005743 237.0
DYD3_k127_6271845_11 Serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000002178 219.0
DYD3_k127_6271845_12 Transcriptional regulator - - - 0.0000000000000000000000000000000000000001263 153.0
DYD3_k127_6271845_13 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.0000000000000000000000000000000000009883 147.0
DYD3_k127_6271845_14 Dodecin K09165 - - 0.000000000000000001596 89.0
DYD3_k127_6271845_15 cAMP biosynthetic process - - - 0.0000000000000006955 87.0
DYD3_k127_6271845_2 DEAD DEAH box K03724 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 598.0
DYD3_k127_6271845_3 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005121 481.0
DYD3_k127_6271845_4 Aldo Keto reductase K01939,K03273,K05275 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0034200,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914 1.1.1.65,3.1.3.82,3.1.3.83,6.3.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007331 456.0
DYD3_k127_6271845_5 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001537 437.0
DYD3_k127_6271845_6 amino acid K03293,K16238,K20265 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003706 433.0
DYD3_k127_6271845_7 COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit K00479 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007243 410.0
DYD3_k127_6271845_8 Protein tyrosine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004246 275.0
DYD3_k127_6271845_9 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002359 263.0
DYD3_k127_6303098_0 Malate synthase K01638 - 2.3.3.9 6.474e-233 732.0
DYD3_k127_6303098_1 Malate synthase K01638 - 2.3.3.9 2.716e-216 681.0
DYD3_k127_6303098_2 cellulose binding - - - 3.158e-207 681.0
DYD3_k127_6303098_3 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000455 108.0
DYD3_k127_6303098_4 Sortilin, neurotensin receptor 3, - - - 0.000000003351 68.0
DYD3_k127_635913_0 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 3.432e-308 959.0
DYD3_k127_635913_1 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 7.046e-293 921.0
DYD3_k127_635913_2 Alpha amylase, catalytic domain K01176,K01236 - 3.2.1.1,3.2.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005386 614.0
DYD3_k127_635913_3 Alpha amylase, catalytic domain K05343 - 3.2.1.1,5.4.99.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000002009 265.0
DYD3_k127_6371707_0 cellulose binding - - - 0.0 1265.0
DYD3_k127_6371707_1 PFAM Gamma-glutamyltranspeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000402 554.0
DYD3_k127_6371707_10 - - - - 0.00000000000000000000000000000000003705 139.0
DYD3_k127_6371707_11 HicA toxin of bacterial toxin-antitoxin, - - - 0.000000000000000000000000001658 113.0
DYD3_k127_6371707_12 Thioredoxin-like - - - 0.000000000000000000000000006107 113.0
DYD3_k127_6371707_13 PFAM Uncharacterised protein family UPF0150 - - - 0.000000000000000000004576 94.0
DYD3_k127_6371707_14 lipolytic protein G-D-S-L family - - - 0.0000000000000000002036 102.0
DYD3_k127_6371707_15 Major Facilitator Superfamily - - - 0.0000000000000003703 93.0
DYD3_k127_6371707_2 Domain of unknown function (DUF5117) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001342 552.0
DYD3_k127_6371707_3 Winged helix-turn helix - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004812 437.0
DYD3_k127_6371707_4 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 387.0
DYD3_k127_6371707_5 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002366 371.0
DYD3_k127_6371707_6 PFAM bifunctional deaminase-reductase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002844 298.0
DYD3_k127_6371707_7 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000004718 225.0
DYD3_k127_6371707_8 Peptidase M64 N-terminus - - - 0.000000000000000000000000000000000000000000004417 165.0
DYD3_k127_6371707_9 LppP/LprE lipoprotein - - - 0.00000000000000000000000000000000000009644 149.0
DYD3_k127_6381666_0 amino acid - - - 1.017e-240 761.0
DYD3_k127_6381666_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 1.596e-236 746.0
DYD3_k127_6381666_10 Phosphate acyltransferases K00655 - 2.3.1.51 0.000000000000000000000000000002296 140.0
DYD3_k127_6381666_11 Protein of unknown function, DUF485 - - - 0.000000000000000000000000001045 114.0
DYD3_k127_6381666_12 HAD superfamily, subfamily IIIB (Acid phosphatase) - GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.000000000000000000000000001112 123.0
DYD3_k127_6381666_13 CAAX protease self-immunity - - - 0.0000000000000000000000003572 118.0
DYD3_k127_6381666_14 Glyoxalase-like domain - - - 0.00000003608 61.0
DYD3_k127_6381666_15 Helix-turn-helix domain - - - 0.000172 49.0
DYD3_k127_6381666_2 pilus organization K02674,K07004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001643 571.0
DYD3_k127_6381666_3 Ring hydroxylating alpha subunit (catalytic domain) K00479 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 511.0
DYD3_k127_6381666_4 Aminotransferase class I and II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001339 469.0
DYD3_k127_6381666_5 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001795 449.0
DYD3_k127_6381666_6 Major facilitator superfamily MFS_1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003362 406.0
DYD3_k127_6381666_7 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002214 385.0
DYD3_k127_6381666_8 Sulfatase - - - 0.00000000000000000000000000000000000000000000001991 187.0
DYD3_k127_6381666_9 UDP-N-acetylmuramyl pentapeptide phosphotransferase UDP-N-acetylglucosamine-1-phosphate transferase K02851 - 2.7.8.33,2.7.8.35 0.000000000000000000000000000000000000000002062 169.0
DYD3_k127_6422540_0 Amidohydrolase family - - - 1.087e-221 700.0
DYD3_k127_6422540_1 PFAM amidohydrolase - - - 2.08e-217 689.0
DYD3_k127_6422540_2 Amidohydrolase family K06015 - 3.5.1.81 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004106 416.0
DYD3_k127_6422540_3 FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 308.0
DYD3_k127_6422540_4 oxidoreductase activity K00274 - 1.4.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000009874 255.0
DYD3_k127_6422540_5 Flavin reductase like domain - - - 0.000000000000000000000001132 114.0
DYD3_k127_6422540_6 FAD dependent oxidoreductase - - - 0.0000000000209 65.0
DYD3_k127_6424237_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 2.319e-311 966.0
DYD3_k127_6424237_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 303.0
DYD3_k127_6424237_2 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005916 298.0
DYD3_k127_6424237_3 - K01992,K19341 - - 0.00000000000000000322 94.0
DYD3_k127_642524_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 5.6e-202 636.0
DYD3_k127_642524_1 nuclear chromosome segregation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002058 482.0
DYD3_k127_642524_2 Peptidase S15 K06978 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003557 313.0
DYD3_k127_642524_3 - - - - 0.0000000000000000000003781 98.0
DYD3_k127_6434613_0 ABC transporter K15738 - - 5.558e-236 742.0
DYD3_k127_6434613_1 Amidohydrolase family K06015 - 3.5.1.81 3.165e-215 684.0
DYD3_k127_6434613_10 Dual specificity phosphatase, catalytic domain - - - 0.000000000000000000000000000000009958 132.0
DYD3_k127_6434613_11 CorA-like Mg2+ transporter protein - - - 0.000000000000000000000000000006621 138.0
DYD3_k127_6434613_12 Amino-transferase class IV K00826 - 2.6.1.42 0.000000000000000000000001899 113.0
DYD3_k127_6434613_13 PFAM NAD dependent epimerase dehydratase family K00329,K00356 - 1.6.5.3,1.6.99.3 0.000000000000000000001866 108.0
DYD3_k127_6434613_14 GDSL-like Lipase/Acylhydrolase family - - - 0.00000000000005137 83.0
DYD3_k127_6434613_15 Cytochrome c K00413 - - 0.00000001178 61.0
DYD3_k127_6434613_2 Domain of unknown function (DUF1731) K07071 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001972 451.0
DYD3_k127_6434613_3 fatty acid desaturase K00507 - 1.14.19.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002546 295.0
DYD3_k127_6434613_4 Heat shock 70 kDa protein K04043 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000246 282.0
DYD3_k127_6434613_5 phosphoribosylanthranilate isomerase activity K01817 - 5.3.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000003077 265.0
DYD3_k127_6434613_6 PFAM Doubled CXXCH motif - - - 0.0000000000000000000000000000000000000000000000000000000000000000004882 242.0
DYD3_k127_6434613_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000108 235.0
DYD3_k127_6434613_8 aminopeptidase activity K19689 - - 0.000000000000000000000000000000000000000000000000000003132 204.0
DYD3_k127_6434613_9 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000000000000000000001693 160.0
DYD3_k127_6465552_0 Transglycosylase K05365 - 2.4.1.129,3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 552.0
DYD3_k127_6465552_1 Memo-like protein K06990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 399.0
DYD3_k127_6465552_10 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 0.0000000000000000001698 91.0
DYD3_k127_6465552_11 Ceramide hydroxylase involved in the alpha-hydroxylation of sphingolipid-associated very long chain fatty acids. Hydroxylates the very long chain fatty acid of ceramides at C2 and C3 K19703 GO:0000170,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006082,GO:0006629,GO:0006631,GO:0006643,GO:0006644,GO:0006664,GO:0006665,GO:0006673,GO:0006675,GO:0006687,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0016491,GO:0019637,GO:0019752,GO:0030148,GO:0031224,GO:0031984,GO:0032787,GO:0042175,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0046467,GO:0055114,GO:0071704,GO:0080132,GO:0098827,GO:1901135,GO:1901564,GO:1901566,GO:1901576,GO:1903509 1.14.18.6 0.0000000000000001958 87.0
DYD3_k127_6465552_12 - - - - 0.000000007745 66.0
DYD3_k127_6465552_2 Ornithine cyclodeaminase/mu-crystallin family K01750,K19244 - 1.4.1.1,4.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008022 329.0
DYD3_k127_6465552_3 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005832 308.0
DYD3_k127_6465552_4 Major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002293 302.0
DYD3_k127_6465552_5 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001199 272.0
DYD3_k127_6465552_6 Thioredoxin - - - 0.00000000000000000000000000000000000000000000000000000000000007465 228.0
DYD3_k127_6465552_7 Uncharacterized ACR, COG1993 K09137 - - 0.00000000000000000000000000000000009573 136.0
DYD3_k127_6465552_8 Thiol disulfide interchange protein dsbA - - - 0.0000000000000000000000000000000002001 147.0
DYD3_k127_6465552_9 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 - 0.00000000000000000000000000000006337 128.0
DYD3_k127_6465904_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 1.5e-321 1016.0
DYD3_k127_6465904_1 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001803 377.0
DYD3_k127_6465904_10 Magnesium chelatase, subunit ChlI C-terminal K07391 - - 0.000000000000004068 77.0
DYD3_k127_6465904_2 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006753 357.0
DYD3_k127_6465904_3 Tetrahydrodipicolinate N-succinyltransferase N-terminal K00674 - 2.3.1.117 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 319.0
DYD3_k127_6465904_4 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004038 286.0
DYD3_k127_6465904_5 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002968 301.0
DYD3_k127_6465904_6 Peptidase family M23 - - - 0.000000000000000000000000000000000000000000000000004435 192.0
DYD3_k127_6465904_7 Sulfatase - - - 0.000000000000000000000000000000000000000000000002036 196.0
DYD3_k127_6465904_8 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.00000000000000000000000003739 116.0
DYD3_k127_6465904_9 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.000000000000000003163 86.0
DYD3_k127_6481927_0 efflux transmembrane transporter activity - - - 7.451e-279 887.0
DYD3_k127_6481927_1 Serine hydroxymethyltransferase K00600 - 2.1.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 579.0
DYD3_k127_6481927_2 SMART PUA domain containing protein K06969 - 2.1.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001928 384.0
DYD3_k127_6481927_3 Bacterial PH domain K08981 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006197 279.0
DYD3_k127_6481927_4 Ribose/Galactose Isomerase K01808 - 5.3.1.6 0.0000000000000000000000000000000000000000000002513 171.0
DYD3_k127_6481927_5 negative regulation of transcription, DNA-templated - - - 0.000000000000000000000000000000000004447 140.0
DYD3_k127_6481927_6 PFAM membrane-flanked domain K09167 - - 0.00000000000006174 79.0
DYD3_k127_6484212_0 Fungalysin metallopeptidase (M36) K01417 - - 1.027e-237 760.0
DYD3_k127_6484212_1 Aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 3.545e-217 707.0
DYD3_k127_6484212_10 Predicted permease K07089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004121 461.0
DYD3_k127_6484212_11 RNA polymerase sigma factor containing a TPR repeat domain K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 413.0
DYD3_k127_6484212_12 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003979 382.0
DYD3_k127_6484212_13 PFAM peptidase S58, DmpA K01266 - 3.4.11.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000172 321.0
DYD3_k127_6484212_14 Transposase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001355 295.0
DYD3_k127_6484212_15 KR domain K00034 - 1.1.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001764 295.0
DYD3_k127_6484212_16 DinB family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006021 260.0
DYD3_k127_6484212_17 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004233 257.0
DYD3_k127_6484212_18 DJ-1/PfpI family - - - 0.000000000000000000000000000000000000000000000000000000009016 207.0
DYD3_k127_6484212_19 Phosphate-selective porin O and P - - - 0.0000000000000000000000000000000000000000000000000000002322 213.0
DYD3_k127_6484212_2 Binding-protein-dependent transport system inner membrane component K02037,K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002432 629.0
DYD3_k127_6484212_20 phosphoserine phosphatase activity K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000007305 208.0
DYD3_k127_6484212_21 - - - - 0.00000000000000000000000000000000000000000000000001374 194.0
DYD3_k127_6484212_22 Xylose isomerase-like TIM barrel - - - 0.00000000000000000000000000000000000000000000001589 187.0
DYD3_k127_6484212_23 - - - - 0.00000000000000000000000000000000000000000003296 171.0
DYD3_k127_6484212_24 YCII-related domain - - - 0.00000000000000000000000000000000000002287 148.0
DYD3_k127_6484212_25 Domain of unknown function (DU1801) - - - 0.0000000000000000000000000000000000001797 148.0
DYD3_k127_6484212_26 Cys-tRNA(Pro) hydrolase activity K03976,K19055 - - 0.00000000000000000000000000000000001124 141.0
DYD3_k127_6484212_27 TfoX N-terminal domain - - - 0.000000000000000000000002008 115.0
DYD3_k127_6484212_28 Transcriptional regulator K03892,K21903 - - 0.00000000000000000000002353 110.0
DYD3_k127_6484212_29 WD40-like Beta Propeller - - - 0.000000000000000000001366 104.0
DYD3_k127_6484212_3 Aminotransferase class-III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003488 559.0
DYD3_k127_6484212_30 phosphoserine phosphatase activity K07315 - 3.1.3.3 0.0000000000000000001038 102.0
DYD3_k127_6484212_31 - - - - 0.00000000000000000164 98.0
DYD3_k127_6484212_32 Thioredoxin domain - - - 0.000000000001013 78.0
DYD3_k127_6484212_33 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000005951 72.0
DYD3_k127_6484212_34 Putative esterase K07214 - - 0.00000000002859 74.0
DYD3_k127_6484212_35 Sugar-specific transcriptional regulator TrmB - - - 0.00000000006287 73.0
DYD3_k127_6484212_37 Carbon-nitrogen hydrolase - - - 0.0000000008966 61.0
DYD3_k127_6484212_38 DinB family - - - 0.00005332 52.0
DYD3_k127_6484212_4 succinyl-diaminopimelate desuccinylase activity K01439 - 3.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000248 542.0
DYD3_k127_6484212_5 phosphate transport system permease protein K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000597 559.0
DYD3_k127_6484212_6 DEAD-like helicases superfamily K11927 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007306 535.0
DYD3_k127_6484212_7 Isocitrate/isopropylmalate dehydrogenase K07246 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0003862,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006108,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009027,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0019752,GO:0036094,GO:0043167,GO:0043169,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046553,GO:0046872,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.83,1.1.1.93,4.1.1.73 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001858 488.0
DYD3_k127_6484212_8 symporter activity K03307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001952 471.0
DYD3_k127_6484212_9 COG0226 ABC-type phosphate transport system periplasmic K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 451.0
DYD3_k127_6489480_0 Glutamate synthase K00265,K00284 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006541,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0015930,GO:0016020,GO:0016053,GO:0016491,GO:0016638,GO:0019676,GO:0019740,GO:0019752,GO:0040007,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.13,1.4.1.14,1.4.7.1 0.0 1295.0
DYD3_k127_6489480_1 response regulator K02481,K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 493.0
DYD3_k127_6489480_2 PFAM GGDEF domain containing protein K02488 - 2.7.7.65 0.0000000000000000000000000000000000004766 149.0
DYD3_k127_6514329_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1024.0
DYD3_k127_6514329_1 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000117 284.0
DYD3_k127_6514329_2 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000000000000000000000000000000000000000000000000000000000000001747 241.0
DYD3_k127_6514329_3 pfam nudix K01515 - 3.6.1.13 0.00000000000000000000000000000000000000001416 162.0
DYD3_k127_6514329_4 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.0000000000000000000000000000000005293 149.0
DYD3_k127_6515202_0 cell shape determining protein MreB K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000062 451.0
DYD3_k127_6515202_1 Ribonuclease E/G family K08300,K08301 GO:0003674,GO:0003824,GO:0004518,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008996,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0022613,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0140098,GO:1901360 3.1.26.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 477.0
DYD3_k127_6515202_2 Penicillin-binding protein 2 K05515 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000345 467.0
DYD3_k127_6515202_3 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004516 284.0
DYD3_k127_6515202_4 Involved in formation and maintenance of cell shape K03570 - - 0.00000000000000000000000000000000001703 146.0
DYD3_k127_6515202_5 cell adhesion - - - 0.00000002481 63.0
DYD3_k127_6518003_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.0 1697.0
DYD3_k127_6518003_1 Malic enzyme, NAD binding domain K00027 - 1.1.1.38 3.83e-227 721.0
DYD3_k127_6518003_2 Acetyl-CoA hydrolase/transferase N-terminal domain K01067 - 3.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 460.0
DYD3_k127_6518003_3 PFAM Aminotransferase class I and II K05825 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 417.0
DYD3_k127_6518003_4 Catalyzes the conversion of dihydroorotate to orotate K00226 - 1.3.98.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005776 397.0
DYD3_k127_6518003_5 4Fe-4S single cluster domain K22227 - - 0.000000000000000000000000000000000000001141 151.0
DYD3_k127_6518003_6 Tetratricopeptide repeat - - - 0.000000002463 69.0
DYD3_k127_6535560_0 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 9.25e-223 706.0
DYD3_k127_6535560_1 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006044 566.0
DYD3_k127_6535560_2 PFAM Type II secretion system F domain K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 451.0
DYD3_k127_6535560_3 His Kinase A (phosphoacceptor) domain K02668 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007683 288.0
DYD3_k127_6535560_4 Bacterial membrane protein, YfhO - - - 0.00000000224 70.0
DYD3_k127_6560599_0 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000000000000000000000000000005276 232.0
DYD3_k127_6560599_1 protein kinase activity - - - 0.0000000000000000000000000000000000000003533 160.0
DYD3_k127_6560599_2 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.000000000000000000000000000000000006431 143.0
DYD3_k127_6560599_3 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0000000000000000000000000000000006203 149.0
DYD3_k127_6560599_4 - - - - 0.0000000000000000000000000000002029 141.0
DYD3_k127_658046_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 1.294e-219 699.0
DYD3_k127_658046_1 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004663 450.0
DYD3_k127_658046_10 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.000000000000000000000000000000000006129 149.0
DYD3_k127_658046_11 virulence factor MVIN family protein - - - 0.000000000000000000000001134 121.0
DYD3_k127_658046_12 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.000000000000001307 88.0
DYD3_k127_658046_2 TIGRFAM amidohydrolase K12941 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005037 392.0
DYD3_k127_658046_3 ADP-glyceromanno-heptose 6-epimerase activity K00091 - 1.1.1.219 0.0000000000000000000000000000000000000000000000000000000000000000000000000302 258.0
DYD3_k127_658046_4 PFAM Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001334 267.0
DYD3_k127_658046_5 polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000007591 240.0
DYD3_k127_658046_6 O-acyltransferase activity K00661 - 2.3.1.79 0.000000000000000000000000000000000000000000000000000000000000003047 228.0
DYD3_k127_658046_7 B12 binding domain K01849 - 5.4.99.2 0.0000000000000000000000000000000000000000000000007206 183.0
DYD3_k127_658046_8 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000327 157.0
DYD3_k127_658046_9 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family K03406 - - 0.0000000000000000000000000000000000009058 160.0
DYD3_k127_6593519_0 Glycosyl transferase family 21 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 603.0
DYD3_k127_6593519_1 ATP-dependent DNA helicase activity K01144,K07464,K16898 - 3.1.11.5,3.1.12.1,3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002296 456.0
DYD3_k127_6593519_10 Acyltransferase - - - 0.00000000000000000000000000000000000000000000001052 180.0
DYD3_k127_6593519_11 exonuclease activity K16899 - 3.6.4.12 0.00000000000000000000000000000000000000000000003708 187.0
DYD3_k127_6593519_12 Belongs to the helicase family. UvrD subfamily - - - 0.0000000000000000000000000000000000000000001256 171.0
DYD3_k127_6593519_13 Protein of unknown function (DUF971) K03593 - - 0.0000000000000000003059 100.0
DYD3_k127_6593519_14 Heat shock protein DnaJ domain protein K12132 - 2.7.11.1 0.000000000000000002258 96.0
DYD3_k127_6593519_15 Forkhead associated domain - GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0006109,GO:0006110,GO:0006140,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009892,GO:0009894,GO:0009895,GO:0009987,GO:0010563,GO:0010675,GO:0010677,GO:0016020,GO:0016310,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0030312,GO:0030808,GO:0030809,GO:0030811,GO:0030812,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031329,GO:0031330,GO:0036211,GO:0042325,GO:0042326,GO:0042802,GO:0043170,GO:0043412,GO:0043457,GO:0043467,GO:0043470,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0045820,GO:0045912,GO:0045934,GO:0045936,GO:0045980,GO:0046777,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051174,GO:0051193,GO:0051195,GO:0051196,GO:0051198,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:1900371,GO:1900372,GO:1900542,GO:1900543,GO:1901564,GO:1903578,GO:1903579,GO:2001169,GO:2001170 - 0.000000000005155 77.0
DYD3_k127_6593519_2 Aminotransferase class-V - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006031 366.0
DYD3_k127_6593519_3 AIR carboxylase K06898 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004213 286.0
DYD3_k127_6593519_4 Dienelactone hydrolase family K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000001236 247.0
DYD3_k127_6593519_5 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07305,K12267 - 1.8.4.11,1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000002195 225.0
DYD3_k127_6593519_6 ATPase domain of DNA mismatch repair MUTS family K07456 - - 0.000000000000000000000000000000000000000000000000000000000000008787 230.0
DYD3_k127_6593519_7 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000002751 233.0
DYD3_k127_6593519_8 Dimerisation domain of Zinc Transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000884 223.0
DYD3_k127_6593519_9 - - - - 0.0000000000000000000000000000000000000000000000000000007915 198.0
DYD3_k127_6599432_0 Aminotransferase class-V - - - 0.0000000000000000000000000000000000000000000000000002719 201.0
DYD3_k127_6599432_1 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000002189 192.0
DYD3_k127_6599432_2 glycolate biosynthetic process K01091,K06019,K13292 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008967,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0033554,GO:0034641,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 3.1.3.18,3.6.1.1 0.000000000000000000000000000000000000000001735 168.0
DYD3_k127_6599432_3 CarD-like/TRCF domain K07736 - - 0.0000000000000000000000000000000000003723 148.0
DYD3_k127_6599432_4 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K05788 - - 0.000000000000000000000813 111.0
DYD3_k127_6599432_5 X-Pro dipeptidyl-peptidase (S15 family) K06889 - - 0.0000000000000002234 88.0
DYD3_k127_6599432_6 Heat shock 70 kDa protein - - - 0.0006157 48.0
DYD3_k127_660989_0 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003888 481.0
DYD3_k127_660989_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002739 472.0
DYD3_k127_660989_2 Putative cyclase K07130 - 3.5.1.9 0.00000000000000000000000000000000000000000000000000002919 201.0
DYD3_k127_660989_3 KDPG and KHG aldolase K01625 - 4.1.2.14,4.1.3.42 0.000000000000000000000000000000000000002157 164.0
DYD3_k127_660989_4 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.000000000008294 65.0
DYD3_k127_660989_5 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 0.000001105 61.0
DYD3_k127_664229_0 ROK family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000212 473.0
DYD3_k127_664229_1 Trypsin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 418.0
DYD3_k127_664229_2 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 302.0
DYD3_k127_664229_3 homocysteine K00547,K21169 - 2.1.1.10 0.0000000000000000000000000000000000002038 157.0
DYD3_k127_664229_4 Protein of unknown function (DUF2911) - - - 0.0000000000000000004101 100.0
DYD3_k127_664229_5 DnaJ molecular chaperone homology domain - - - 0.0000000005507 70.0
DYD3_k127_664229_6 Periplasmic or secreted lipoprotein K04065 GO:0005575,GO:0005623,GO:0006457,GO:0006950,GO:0006970,GO:0006972,GO:0008150,GO:0009628,GO:0009987,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464,GO:0050896,GO:0061077 - 0.0000009396 57.0
DYD3_k127_6647269_0 glutamate carboxypeptidase K01301 - 3.4.17.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000366 264.0
DYD3_k127_6647269_1 PFAM glycosyl transferase family 9 K02841 - - 0.0000000000000000000000000000000000000000000000000000000000151 222.0
DYD3_k127_6647269_2 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.0000000000000000000000000000000000000000000002829 180.0
DYD3_k127_6647269_3 pfkB family carbohydrate kinase K03272 - 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000004808 165.0
DYD3_k127_6647269_4 Phospholipid methyltransferase - - - 0.0000000000000000000000000000797 122.0
DYD3_k127_6648973_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 6.29e-199 650.0
DYD3_k127_6648973_1 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 432.0
DYD3_k127_6648973_2 PFAM Nucleotidyl transferase K00963 - 2.7.7.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006301 393.0
DYD3_k127_6648973_3 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002049 329.0
DYD3_k127_6648973_4 Peptidase dimerisation domain K01295 - 3.4.17.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000002091 276.0
DYD3_k127_6648973_5 Putative serine dehydratase domain K01753 - 4.3.1.18 0.00000000000000000000000000000000000000000000004115 188.0
DYD3_k127_6648973_6 Belongs to the arginase family K01476 - 3.5.3.1 0.000000000000000000000000000001814 134.0
DYD3_k127_6648973_7 Regulatory protein, FmdB family - - - 0.00000000000000000002979 94.0
DYD3_k127_6648973_8 PFAM Dual specificity protein phosphatase - - - 0.000000000000000004088 90.0
DYD3_k127_6657796_0 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006153 445.0
DYD3_k127_6657796_1 PFAM glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002755 297.0
DYD3_k127_6657796_10 transferase activity, transferring acyl groups - - - 0.0000000000001957 82.0
DYD3_k127_6657796_11 Methyltransferase domain - - - 0.00000002904 67.0
DYD3_k127_6657796_12 - - - - 0.0000006294 64.0
DYD3_k127_6657796_13 PFAM glycosyl transferase group 1 - - - 0.00001482 52.0
DYD3_k127_6657796_2 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008605 265.0
DYD3_k127_6657796_3 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04565 - 1.15.1.1 0.0000000000000000000000000000000000000000000001117 190.0
DYD3_k127_6657796_4 Cytidylyltransferase - - - 0.000000000000000000000000000000000000000000003227 180.0
DYD3_k127_6657796_5 polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000275 183.0
DYD3_k127_6657796_6 PFAM Methyltransferase type 11 - - - 0.00000000000000000000000000000000000000000003666 179.0
DYD3_k127_6657796_7 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000003288 169.0
DYD3_k127_6657796_8 Glycosyl transferases group 1 - - - 0.000000000000000000000000000002658 140.0
DYD3_k127_6657796_9 Glycosyltransferase Family 4 - - - 0.000000000000007522 88.0
DYD3_k127_6672328_0 LytB protein K03527 - 1.17.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003863 460.0
DYD3_k127_6672328_1 Enoyl- acyl-carrier-protein reductase NADH K00208 GO:0000166,GO:0003674,GO:0003824,GO:0004312,GO:0004318,GO:0005488,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006950,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009266,GO:0009409,GO:0009628,GO:0009987,GO:0016043,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0022607,GO:0030497,GO:0032787,GO:0033554,GO:0036094,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0048037,GO:0050661,GO:0050662,GO:0050896,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0051716,GO:0055114,GO:0065003,GO:0070417,GO:0071704,GO:0071840,GO:0072330,GO:0097159,GO:1901265,GO:1901363,GO:1901576 1.3.1.10,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 311.0
DYD3_k127_6672328_11 Histidine kinase K07636 - 2.7.13.3 0.00000005056 62.0
DYD3_k127_6672328_2 NmrA-like family K00329,K00356 - 1.6.5.3,1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008568 289.0
DYD3_k127_6672328_3 Transcriptional regulatory protein, C terminal K07658 - - 0.0000000000000000000000000000000000000000000000000000000000000000004353 236.0
DYD3_k127_6672328_4 involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744,K09774,K22110 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0006810,GO:0008150,GO:0008643,GO:0008645,GO:0009279,GO:0015267,GO:0015288,GO:0015749,GO:0015750,GO:0015751,GO:0015757,GO:0016020,GO:0019867,GO:0022803,GO:0022829,GO:0022857,GO:0030312,GO:0030313,GO:0031975,GO:0034219,GO:0044462,GO:0044464,GO:0046323,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:1904659 - 0.00000000000000000000000000000000000000000000000000000005206 224.0
DYD3_k127_6672328_5 Protein of unknown function (DUF1697) - - - 0.000000000000000000000000000000000000000000000000000004067 201.0
DYD3_k127_6672328_6 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000000000000000000000000008564 193.0
DYD3_k127_6672328_7 PFAM isochorismatase hydrolase - - - 0.00000000000000000000000000000000000000000107 174.0
DYD3_k127_6672328_9 RmlD substrate binding domain K15856 - 1.1.1.281 0.00000000000000007474 96.0
DYD3_k127_6692117_0 Glycosyl hydrolase 36 superfamily, catalytic domain K00702,K13688 - 2.4.1.20 0.0 1304.0
DYD3_k127_6692117_1 radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 630.0
DYD3_k127_6692117_2 SnoaL-like domain - - - 0.000000000000000000000000000000000000000000002149 186.0
DYD3_k127_6692117_3 Domain of unknown function (DUF4118) - - - 0.000000000000000000000000827 105.0
DYD3_k127_6692117_4 RNA recognition motif - - - 0.0000000000000000000001375 106.0
DYD3_k127_6692117_5 - - - - 0.000000000000006783 81.0
DYD3_k127_6696486_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 2.328e-230 738.0
DYD3_k127_6696486_1 Belongs to the SIS family. GutQ KpsF subfamily K01627,K03281,K06041 - 2.5.1.55,5.3.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003963 359.0
DYD3_k127_6696486_2 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase K01627 - 2.5.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006723 334.0
DYD3_k127_6696486_3 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.000000000000000000000000000000000000000000000000000000000000000000000000005331 261.0
DYD3_k127_6696486_4 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane K19804 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008653,GO:0009987,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046872,GO:0071704,GO:0071944,GO:1901135,GO:1903509 - 0.00000000000000000000000000000000000000007882 166.0
DYD3_k127_6696486_5 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 - 3.1.3.45 0.000000000000000000000000000000000000455 154.0
DYD3_k127_6696486_6 Bacterial membrane protein, YfhO - - - 0.000000003765 70.0
DYD3_k127_674208_0 DEAD DEAH box K03724 - - 0.0 1044.0
DYD3_k127_674208_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 385.0
DYD3_k127_674208_10 PFAM ABC-2 type transporter K01992 - - 0.00000000000000000000000000000000000000442 165.0
DYD3_k127_674208_11 TIGRFAM glutaredoxin-like domain protein - - - 0.0000000000000000000000000002584 119.0
DYD3_k127_674208_12 Protein of unknown function (DUF1572) - - - 0.00000000000000000000006039 104.0
DYD3_k127_674208_13 Protein of unknown function (DUF1624) - - - 0.00000000000000000001544 104.0
DYD3_k127_674208_14 Domain of unknown function (DUF4340) - - - 0.00000000000000000003915 107.0
DYD3_k127_674208_15 alkyl hydroperoxide reductase activity - - - 0.000000000000000005425 85.0
DYD3_k127_674208_16 - - - - 0.0000000000000887 73.0
DYD3_k127_674208_17 - - - - 0.000000000002234 81.0
DYD3_k127_674208_18 Domain of unknown function (DUF4388) - - - 0.000000000004034 79.0
DYD3_k127_674208_19 Carotenoid biosynthesis protein - - - 0.00000000005881 76.0
DYD3_k127_674208_2 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005598 377.0
DYD3_k127_674208_20 Tetratricopeptide TPR_2 repeat protein - - - 0.000004485 59.0
DYD3_k127_674208_21 RmuC domain protein K09760 - - 0.00001369 49.0
DYD3_k127_674208_3 ABC-type uncharacterized transport system K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009462 348.0
DYD3_k127_674208_4 Glycosyl transferase, family 2 K00721 - 2.4.1.83 0.00000000000000000000000000000000000000000000000000000000000000000001091 256.0
DYD3_k127_674208_5 Forkhead associated domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000001372 262.0
DYD3_k127_674208_6 pyruvate phosphate dikinase K01007 - 2.7.9.2 0.0000000000000000000000000000000000000000000000000000000000000000002911 261.0
DYD3_k127_674208_7 Domain of unknown function (DUF1996) - - - 0.0000000000000000000000000000000000000000000000000000005784 212.0
DYD3_k127_674208_8 phosphatidylinositol metabolic process K00728 - 2.4.1.109 0.0000000000000000000000000000000000000000000000002926 202.0
DYD3_k127_674208_9 GAF domain - - - 0.00000000000000000000000000000000000000214 163.0
DYD3_k127_6748074_0 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008506 611.0
DYD3_k127_6748074_1 Beta-eliminating lyase K01620 - 4.1.2.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004314 329.0
DYD3_k127_6748074_2 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000008599 283.0
DYD3_k127_6748074_3 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000289 232.0
DYD3_k127_6748074_4 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000000000000000000196 160.0
DYD3_k127_6748074_5 Bacterial low temperature requirement A protein (LtrA) - - - 0.0000000000000000000000000000000000000000004526 181.0
DYD3_k127_6748074_6 - - - - 0.000000000000000000000000000000000000000001119 173.0
DYD3_k127_6748074_7 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000001302 146.0
DYD3_k127_6748074_8 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.00000000000000000000000000001262 123.0
DYD3_k127_6748074_9 Protein of unknown function (DUF861) - - - 0.00000000002262 70.0
DYD3_k127_6748659_0 Insulinase (Peptidase family M16) K07263 - - 7.014e-200 634.0
DYD3_k127_6748659_1 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000004844 263.0
DYD3_k127_6748659_2 FeS assembly SUF system protein SufT - - - 0.0000000000000000000000000000000000000000000000000000000001703 208.0
DYD3_k127_6748659_3 SUF system FeS assembly protein K04488 - - 0.000000000000000000000000000000000000000000000002191 186.0
DYD3_k127_6748659_4 Cupin 2, conserved barrel - - - 0.0000000000000000000000000000000000000007635 153.0
DYD3_k127_6748659_5 2 iron, 2 sulfur cluster binding - - - 0.000000000000000000000000000000000001592 143.0
DYD3_k127_6748659_6 Transcriptional regulatory protein, C terminal - - - 0.000003121 59.0
DYD3_k127_6756384_0 MacB-like periplasmic core domain - - - 3.27e-321 1003.0
DYD3_k127_6756384_1 Involved in the tonB-independent uptake of proteins - - - 2.614e-219 707.0
DYD3_k127_6756384_2 Amidohydrolase K07045 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003765 337.0
DYD3_k127_6756384_3 Protein tyrosine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002013 280.0
DYD3_k127_6756384_4 PFAM Conserved TM helix - - - 0.000000000000000000000000000000000000000000000007577 179.0
DYD3_k127_6756384_5 ketosteroid isomerase - - - 0.00005108 51.0
DYD3_k127_6785528_0 ATP dependent DNA ligase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 469.0
DYD3_k127_6785528_1 ATPase involved in DNA repair - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002291 344.0
DYD3_k127_6785528_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000001404 240.0
DYD3_k127_6785528_3 MASE1 domain protein K07216 - - 0.0000000000000000000000000000000000000000000000000000000000000433 231.0
DYD3_k127_6785528_4 peptidase - - - 0.000000000000000000000000000000000000000000000000000000000006235 214.0
DYD3_k127_6785528_6 - - - - 0.000000000000000000003545 99.0
DYD3_k127_6785528_7 beta-lactamase activity K07126 - - 0.0000000002384 74.0
DYD3_k127_6792068_0 Glutamine synthetase type III N terminal K01915 - 6.3.1.2 8.696e-254 799.0
DYD3_k127_6792068_1 May be involved in recombinational repair of damaged DNA K03631 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005657 405.0
DYD3_k127_6792068_10 Biopolymer transport protein ExbD/TolR K03559,K03560 - - 0.00000000000000000000000036 110.0
DYD3_k127_6792068_11 Outer membrane lipoprotein - - - 0.00000000000000000000000356 112.0
DYD3_k127_6792068_12 TIGRFAM TonB family C-terminal domain K03832 - - 0.00007189 53.0
DYD3_k127_6792068_2 synthase K16167 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006629,GO:0006725,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009273,GO:0009698,GO:0009699,GO:0009714,GO:0009715,GO:0009987,GO:0016020,GO:0016043,GO:0019438,GO:0019748,GO:0022607,GO:0032991,GO:0034081,GO:0042180,GO:0042181,GO:0042546,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044550,GO:0071554,GO:0071704,GO:0071766,GO:0071770,GO:0071840,GO:0071944,GO:1901360,GO:1901362,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000001584 262.0
DYD3_k127_6792068_3 Glucose inhibited division protein A K21401 - 1.3.99.38 0.000000000000000000000000000000000000000000000000000000000000000000000007824 266.0
DYD3_k127_6792068_4 TolB amino-terminal domain K03641 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006810,GO:0008104,GO:0008150,GO:0009719,GO:0009987,GO:0010033,GO:0010243,GO:0015031,GO:0015833,GO:0015893,GO:0017038,GO:0019534,GO:0019904,GO:0022857,GO:0030288,GO:0030313,GO:0031975,GO:0032153,GO:0032991,GO:0033036,GO:0042221,GO:0042493,GO:0042597,GO:0042886,GO:0042891,GO:0043213,GO:0044464,GO:0044877,GO:0045184,GO:0046677,GO:0046678,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055085,GO:0070887,GO:0071236,GO:0071237,GO:0071310,GO:0071417,GO:0071495,GO:0071702,GO:0071705,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901998 - 0.00000000000000000000000000000000000000000000000000000000000000000003737 250.0
DYD3_k127_6792068_5 MotA TolQ ExbB proton channel K03562 - - 0.000000000000000000000000000000000000000000000000000004605 198.0
DYD3_k127_6792068_6 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008047,GO:0008150,GO:0008152,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0030234,GO:0031668,GO:0033554,GO:0034641,GO:0042802,GO:0043085,GO:0043170,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050790,GO:0050896,GO:0051716,GO:0065007,GO:0065009,GO:0071496,GO:0071704,GO:0090304,GO:0097159,GO:0098772,GO:1901360,GO:1901363 - 0.0000000000000000000000000000000000000106 155.0
DYD3_k127_6792068_7 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.000000000000000000000000000000002936 134.0
DYD3_k127_6792068_8 Belongs to the ompA family K03640 - - 0.0000000000000000000000000000002099 139.0
DYD3_k127_6792068_9 methyltransferase - - - 0.0000000000000000000000000001157 125.0
DYD3_k127_6792726_0 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 1.792e-207 659.0
DYD3_k127_6792726_1 Surface antigen K07278 - - 0.00000000000000000000000002188 113.0
DYD3_k127_6792726_2 Smr domain - - - 0.000000000000000000001403 97.0
DYD3_k127_6792726_3 PHP domain protein - - - 0.00000000000000009177 90.0
DYD3_k127_6792726_4 peptidyl-tyrosine sulfation - - - 0.00005121 56.0
DYD3_k127_6796617_0 ACT domain K12524 - 1.1.1.3,2.7.2.4 5.191e-221 711.0
DYD3_k127_6796617_1 homocysteine S-methyltransferase K00297,K00547 - 1.5.1.20,2.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000173 595.0
DYD3_k127_6796617_2 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001188 365.0
DYD3_k127_6796617_3 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000252 362.0
DYD3_k127_6796617_4 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.000000000000000000000000000000000000000000000008499 175.0
DYD3_k127_6796617_5 von Willebrand factor, type A - - - 0.000000000000000000000000000000013 139.0
DYD3_k127_6796617_6 Integral membrane protein CcmA involved in cell shape determination - - - 0.0000000000000795 81.0
DYD3_k127_6796617_7 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.0003206 53.0
DYD3_k127_6816747_0 short chain dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008252 551.0
DYD3_k127_6816747_1 PFAM ABC transporter, transmembrane region K06147,K11085 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003759 469.0
DYD3_k127_6816747_2 ATPase associated with - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001547 374.0
DYD3_k127_6816747_3 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004973 327.0
DYD3_k127_6816747_4 Belongs to the LOG family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009374 276.0
DYD3_k127_6816747_5 Protein of unknown function DUF58 - - - 0.00000000000000000000000000000000000000000000000000000000000000000003571 258.0
DYD3_k127_6816747_6 polysaccharide catabolic process K03478 - 3.5.1.105 0.000000000000000000000000000000000167 152.0
DYD3_k127_6816747_7 Transglutaminase-like superfamily - - - 0.000000000000005045 89.0
DYD3_k127_6816747_8 Putative zinc- or iron-chelating domain K18475 - - 0.000003568 59.0
DYD3_k127_6837147_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008709 461.0
DYD3_k127_6837147_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 349.0
DYD3_k127_6837147_2 Required for chromosome condensation and partitioning K03529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001308 337.0
DYD3_k127_6837147_3 Ferrous iron transport protein B K04759 - - 0.0000000000000000000000000000000000000000000000000000002154 199.0
DYD3_k127_6837147_4 Predicted membrane protein (DUF2079) K07778 - 2.7.13.3 0.000001592 62.0
DYD3_k127_690258_0 Pyridoxal-phosphate dependent enzyme K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003164 514.0
DYD3_k127_690258_1 Phosphohydrolase-associated domain K01129 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008832,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009151,GO:0009155,GO:0009166,GO:0009200,GO:0009204,GO:0009215,GO:0009217,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016787,GO:0016788,GO:0016793,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042578,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046070,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576 3.1.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 418.0
DYD3_k127_690258_10 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.00000000000000000000000000000000000000000000000000000000000000000003525 237.0
DYD3_k127_690258_11 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000006778 216.0
DYD3_k127_690258_12 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000009419 213.0
DYD3_k127_690258_13 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.000000000000000000000000000000000000000000000003944 190.0
DYD3_k127_690258_14 IMS family HHH motif - - - 0.000000000000000000000000000000000000003424 160.0
DYD3_k127_690258_15 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.00000000000000000000000000000000001573 144.0
DYD3_k127_690258_16 Belongs to the aspartate-semialdehyde dehydrogenase family K00133 - 1.2.1.11 0.000000000000002461 76.0
DYD3_k127_690258_17 Protein of unknown function (DUF3467) - - - 0.0008836 48.0
DYD3_k127_690258_2 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000982 332.0
DYD3_k127_690258_3 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003642 317.0
DYD3_k127_690258_4 chaperone-mediated protein folding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000295 321.0
DYD3_k127_690258_5 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K11206 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003552 297.0
DYD3_k127_690258_6 Psort location Cytoplasmic, score K01424 - 3.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006135 291.0
DYD3_k127_690258_7 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000003312 256.0
DYD3_k127_690258_8 Threonyl and Alanyl tRNA synthetase second additional domain K01872 - 6.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000005934 267.0
DYD3_k127_690258_9 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0001871,GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005623,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009986,GO:0009987,GO:0010467,GO:0019538,GO:0030246,GO:0030247,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2001065 - 0.000000000000000000000000000000000000000000000000000000000000000000000363 247.0
DYD3_k127_6932223_0 NhaP-type Na H and K H - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004514 531.0
DYD3_k127_6932223_1 symporter activity K03307,K11928 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000495 462.0
DYD3_k127_6932223_2 Putative modulator of DNA gyrase K03592 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003948 421.0
DYD3_k127_6932223_3 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001883 317.0
DYD3_k127_6932223_4 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 331.0
DYD3_k127_6932223_5 Protein kinase domain K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000002653 213.0
DYD3_k127_6932223_6 - - - - 0.000000000000000000005371 102.0
DYD3_k127_6932223_7 Heavy-metal resistance - - - 0.000000000002406 75.0
DYD3_k127_6973485_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002592 267.0
DYD3_k127_6973485_1 nuclease activity K18828 - - 0.0000000000000000000000000000000001658 141.0
DYD3_k127_6973485_2 Lipid A core-O-antigen ligase-like enyme K18814 - - 0.00000000000000000000000000005684 132.0
DYD3_k127_6973485_3 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.000000000000000000000000009561 113.0
DYD3_k127_6973485_4 Putative prokaryotic signal transducing protein - - - 0.00000006332 62.0
DYD3_k127_6973485_5 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.00008879 48.0
DYD3_k127_6973485_6 histone H2A K63-linked ubiquitination - - - 0.0001663 53.0
DYD3_k127_7027184_0 Prolyl oligopeptidase, N-terminal beta-propeller domain K01354 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0043170,GO:0044238,GO:0044424,GO:0044464,GO:0070011,GO:0070012,GO:0071704,GO:0140096,GO:1901564 3.4.21.83 2.584e-301 938.0
DYD3_k127_7027184_1 choline dehydrogenase activity - - - 5.612e-197 635.0
DYD3_k127_7027184_10 - - - - 0.0000000000000000000000000000000000000000000003407 181.0
DYD3_k127_7027184_11 Pkd domain containing protein - - - 0.0000000000000000000000000000000000000000000006762 187.0
DYD3_k127_7027184_12 Low molecular weight phosphatase family K01104 - 3.1.3.48 0.00000000000000000000000000000000000000000004883 166.0
DYD3_k127_7027184_13 Transport permease protein K01992 - - 0.0000000000000000000000000000000000000000175 174.0
DYD3_k127_7027184_14 Domain of unknown function (DUF1996) - - - 0.00000000000000000000000000000000000000008215 171.0
DYD3_k127_7027184_15 Amidohydrolase family - - - 0.0000000000000000000000000000000000000002504 155.0
DYD3_k127_7027184_16 PFAM DoxX family protein K15977 - - 0.00000000000000000000000000000007968 130.0
DYD3_k127_7027184_17 HxlR-like helix-turn-helix - - - 0.000000000000000000000000007517 114.0
DYD3_k127_7027184_18 - - - - 0.0000000000000000000000004194 115.0
DYD3_k127_7027184_2 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002709 409.0
DYD3_k127_7027184_20 Glutathione peroxidase - - - 0.000000000000000000535 97.0
DYD3_k127_7027184_21 PFAM DivIVA family protein K04074 - - 0.0000000000000004766 84.0
DYD3_k127_7027184_22 Belongs to the UPF0235 family K09131 - - 0.000000000000002894 85.0
DYD3_k127_7027184_23 Membrane bound O-acyl transferase family - - - 0.00000000001591 75.0
DYD3_k127_7027184_25 Protein tyrosine kinase - - - 0.0000005975 53.0
DYD3_k127_7027184_26 anaphase-promoting complex-dependent catabolic process - - - 0.00002678 49.0
DYD3_k127_7027184_27 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.000166 55.0
DYD3_k127_7027184_3 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002096 389.0
DYD3_k127_7027184_4 Belongs to the metallo-dependent hydrolases superfamily. HutI family K01468 - 3.5.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 354.0
DYD3_k127_7027184_5 ATPase activity K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009691 301.0
DYD3_k127_7027184_6 Fructosamine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001872 256.0
DYD3_k127_7027184_7 PFAM fumarate lyase K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000001332 250.0
DYD3_k127_7027184_8 PQQ-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000002683 237.0
DYD3_k127_7027184_9 YwiC-like protein - - - 0.000000000000000000000000000000000000000000000007168 196.0
DYD3_k127_7063615_0 Major facilitator K06902 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002046 429.0
DYD3_k127_7063615_1 Putative cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006722 329.0
DYD3_k127_7063615_2 TRAP transporter T-component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000555 336.0
DYD3_k127_7063615_3 PFAM TRAP dicarboxylate transporter- DctP subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001309 303.0
DYD3_k127_7063615_4 ABC-type glycine betaine transport system K05845 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005598 263.0
DYD3_k127_7076079_0 enterobactin catabolic process - - - 1.161e-272 850.0
DYD3_k127_7076079_1 Belongs to the aldehyde dehydrogenase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023 490.0
DYD3_k127_7076079_10 COGs COG2114 Adenylate cyclase family 3 (some protein contain HAMP domain) - - - 0.0000000000000000000003249 104.0
DYD3_k127_7076079_11 - - - - 0.0000000000000000001225 94.0
DYD3_k127_7076079_12 - - - - 0.00000000000000003524 81.0
DYD3_k127_7076079_13 thiolester hydrolase activity K06889 - - 0.0000000002407 71.0
DYD3_k127_7076079_14 PFAM Tetratricopeptide repeat - - - 0.0000002239 64.0
DYD3_k127_7076079_15 Alpha/beta hydrolase family - - - 0.00008771 51.0
DYD3_k127_7076079_16 beta-lactamase domain protein K06897 - 2.5.1.105 0.0001028 45.0
DYD3_k127_7076079_2 Threonine dehydratase K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008006 361.0
DYD3_k127_7076079_3 prohibitin homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003966 348.0
DYD3_k127_7076079_4 Amino acid permease K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001293 284.0
DYD3_k127_7076079_5 Required for chromosome condensation and partitioning K03529 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003592 271.0
DYD3_k127_7076079_6 PFAM EAL domain protein - - - 0.000000000000000000000000000000000000000000000000000000000005492 239.0
DYD3_k127_7076079_7 Maleate cis-trans isomerase K01799 - 5.2.1.1 0.00000000000000000000000000000000000000000000000003836 191.0
DYD3_k127_7076079_8 Maleate cis-trans isomerase K01799 - 5.2.1.1 0.0000000000000000000000000000000000000000000006281 177.0
DYD3_k127_7076079_9 beta-lactamase domain protein K06897 - 2.5.1.105 0.0000000000000000000000000279 113.0
DYD3_k127_7121710_0 NAD-glutamate dehydrogenase K15371 - 1.4.1.2 6.568e-271 884.0
DYD3_k127_7121710_1 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004997 585.0
DYD3_k127_7121710_2 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.0000000000000002306 82.0
DYD3_k127_7121710_3 Forkhead associated domain K01990,K21397 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006810,GO:0008150,GO:0015399,GO:0015405,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0030312,GO:0031224,GO:0042623,GO:0042626,GO:0043492,GO:0044424,GO:0044425,GO:0044444,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944 - 0.0000000000001144 78.0
DYD3_k127_7158779_0 Dehydrogenase K00117 - 1.1.5.2 4.628e-209 681.0
DYD3_k127_7158779_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002815 360.0
DYD3_k127_7158779_2 Acetamidase/Formamidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001027 274.0
DYD3_k127_7158779_3 Fumarylacetoacetate (FAA) hydrolase family - - - 0.0000000000000000000000000000000000000000000000000001249 199.0
DYD3_k127_7158779_4 Glycosyl transferase family 2 K00721 - 2.4.1.83 0.00000000000000000000000000000000000000000501 160.0
DYD3_k127_7158779_5 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.000000000000000000000000000000000000001045 164.0
DYD3_k127_7158779_6 HupE / UreJ protein - - - 0.0000000000000000008461 91.0
DYD3_k127_7158779_7 amine dehydrogenase activity - - - 0.0000005353 62.0
DYD3_k127_7159968_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1233.0
DYD3_k127_7159968_1 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.0 1033.0
DYD3_k127_7159968_10 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000987 240.0
DYD3_k127_7159968_11 Putative stress-induced transcription regulator - - - 0.00000000000000000000000000000000000000000000003499 177.0
DYD3_k127_7159968_12 Alpha beta hydrolase - - - 0.000000000000000000000000001094 115.0
DYD3_k127_7159968_13 Tetratricopeptide repeat - - - 0.0000000000000000000000003145 115.0
DYD3_k127_7159968_15 signal transduction histidine kinase - - - 0.0000000000000000000003775 98.0
DYD3_k127_7159968_16 PBS lyase HEAT domain protein repeat-containing protein - - - 0.0000001969 61.0
DYD3_k127_7159968_17 - - - - 0.000002543 60.0
DYD3_k127_7159968_19 Mycothiol maleylpyruvate isomerase N-terminal domain - - - 0.0001739 50.0
DYD3_k127_7159968_2 DEAD/H associated K03724 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002082 532.0
DYD3_k127_7159968_3 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001912 496.0
DYD3_k127_7159968_4 peptidase dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007815 432.0
DYD3_k127_7159968_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 340.0
DYD3_k127_7159968_6 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004632 303.0
DYD3_k127_7159968_7 Adenosine/AMP deaminase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001114 290.0
DYD3_k127_7159968_8 PFAM ABC transporter related K02017,K02018 - 3.6.3.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000005734 274.0
DYD3_k127_7159968_9 Binding-protein-dependent transport system inner membrane component K02018 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001938 248.0
DYD3_k127_7172660_0 - - - - 0.000000000000000000000000000000000000000000000148 179.0
DYD3_k127_7172660_1 4Fe-4S ferredoxin iron-sulfur binding domain protein K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000001796 166.0
DYD3_k127_7172660_2 Forkhead associated domain - - - 0.00000000000000000000000000000000000000000001846 171.0
DYD3_k127_7172660_4 succinate dehydrogenase K00240 - 1.3.5.1,1.3.5.4 0.0000000000000004381 83.0
DYD3_k127_7224867_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 468.0
DYD3_k127_7224867_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 401.0
DYD3_k127_7224867_2 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005705 399.0
DYD3_k127_7224867_3 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.00000000000000000000000000000000000000000000000001944 183.0
DYD3_k127_7224867_4 MarR family transcriptional regulator - - - 0.000000000000000000000000000000000000000000000008761 177.0
DYD3_k127_7224867_5 Sensor diguanylate cyclase, GAF domain-containing - - - 0.000000000000000000000000000000000000001715 162.0
DYD3_k127_7224867_6 Lecithin:cholesterol acyltransferase - - - 0.0000000000000000000004101 113.0
DYD3_k127_7224867_7 COG2206 HD-GYP domain - - - 0.000000000000000003651 100.0
DYD3_k127_7224867_8 Domain of unknown function (DUF4388) - - - 0.000000000007987 75.0
DYD3_k127_7224867_9 lyase activity - - - 0.0000000006576 72.0
DYD3_k127_727876_0 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002712 459.0
DYD3_k127_727876_1 cystathionine beta-lyase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007494 455.0
DYD3_k127_727876_2 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 438.0
DYD3_k127_727876_3 transferase activity, transferring glycosyl groups K13693 - 2.4.1.266 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003633 344.0
DYD3_k127_727876_4 histidine kinase A domain protein - - - 0.00000000000000000000000000000000001108 141.0
DYD3_k127_727876_5 phosphorelay signal transduction system - - - 0.0000000000000000000000000001118 127.0
DYD3_k127_727876_6 Iodothyronine deiodinase - - - 0.0000000000000000000003083 100.0
DYD3_k127_736410_0 Peptidase m28 - - - 9.018e-198 628.0
DYD3_k127_736410_1 Sodium:solute symporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006643 521.0
DYD3_k127_736410_2 Metal binding domain of Ada - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002648 355.0
DYD3_k127_736410_3 LytTr DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005012 294.0
DYD3_k127_736410_4 methyltransferase - - - 0.000000000000000000000000000000000000000000000000002609 198.0
DYD3_k127_736410_5 PFAM Formylglycine-generating sulfatase enzyme - - - 0.0000000000000000000000000000000000000000000001227 176.0
DYD3_k127_736410_6 PFAM glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000003523 188.0
DYD3_k127_736410_7 Signal transduction histidine kinase, LytS K02478 - 2.7.13.3 0.000000000000000000000000000000000002749 143.0
DYD3_k127_736410_8 - - - - 0.00000000000000000001339 95.0
DYD3_k127_740658_0 Aminotransferase class I and II K00812 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001934 432.0
DYD3_k127_740658_1 chain release factor K15034 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0003824,GO:0004045,GO:0005488,GO:0006412,GO:0006414,GO:0006415,GO:0006417,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016043,GO:0016150,GO:0016787,GO:0016788,GO:0019222,GO:0019538,GO:0022411,GO:0031323,GO:0031326,GO:0032268,GO:0032984,GO:0034248,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044877,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0052689,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0072344,GO:0080090,GO:0097159,GO:0140098,GO:0140101,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2000112 - 0.000000000000000000000000003264 117.0
DYD3_k127_740658_2 PFAM secretion protein HlyD family protein K01993 - - 0.0000000000001588 76.0
DYD3_k127_740658_3 Dead deah box helicase domain protein - - - 0.0000000007917 63.0
DYD3_k127_740658_4 - - - - 0.000000002025 60.0
DYD3_k127_740658_5 Phage integrase family - - - 0.00001109 55.0
DYD3_k127_747495_0 Sigma-54 interaction domain K02481 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001559 395.0
DYD3_k127_747495_1 metal-dependent phosphohydrolase HD region - - - 0.0000000000000000000000000000000000000000000000000000004008 213.0
DYD3_k127_747495_2 PFAM ATP-binding region ATPase domain protein - - - 0.000000000000000000000000000000000000000000000000101 195.0
DYD3_k127_747495_3 O-Antigen ligase - - - 0.00000000000000001707 96.0
DYD3_k127_747495_4 self proteolysis - - - 0.00000000003083 74.0
DYD3_k127_761280_0 PFAM Thiamine pyrophosphate K00175,K00187 - 1.2.7.11,1.2.7.3,1.2.7.7 2.125e-199 651.0
DYD3_k127_761280_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01887 - 6.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003848 552.0
DYD3_k127_761280_11 Tetratricopeptide repeat - - - 0.0001225 49.0
DYD3_k127_761280_2 negative regulation of protein lipidation K19294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008047 540.0
DYD3_k127_761280_3 Pyruvate:ferredoxin oxidoreductase core domain II K00186 - 1.2.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000244 534.0
DYD3_k127_761280_4 Pyruvate kinase K00873 GO:0003674,GO:0003824,GO:0004743,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 2.7.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 471.0
DYD3_k127_761280_5 PFAM Peptidase C26 K07010 - - 0.0000000000000000000000000000000000000000000000000002005 211.0
DYD3_k127_761280_6 DinB family - - - 0.00000000000000000000000000000000000000000002621 168.0
DYD3_k127_761280_7 SGNH hydrolase-like domain, acetyltransferase AlgX K19295 - - 0.0000000000000000000000000000000000001155 155.0
DYD3_k127_761280_8 ArsC family K00537 - 1.20.4.1 0.00000000000000001034 86.0
DYD3_k127_761280_9 Cytochrome C biogenesis protein transmembrane region K04084 - 1.8.1.8 0.00000000000000006923 92.0
DYD3_k127_762011_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000095 433.0
DYD3_k127_762011_1 oxidoreductase activity - - - 0.000000000000000000000000007713 128.0
DYD3_k127_762011_2 TonB-dependent receptor - - - 0.00000000000000000000000009036 115.0
DYD3_k127_762011_3 SMART Tetratricopeptide - - - 0.0000005916 60.0
DYD3_k127_780010_0 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000001443 218.0
DYD3_k127_780010_1 PFAM glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000008064 214.0
DYD3_k127_780010_2 PFAM glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000007827 192.0
DYD3_k127_780010_3 Surface antigen variable number - - - 0.000000000000000000000000000000000000000000001459 190.0
DYD3_k127_780010_4 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.0000000000000000000000000000000000000006197 163.0
DYD3_k127_845717_0 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 4.504e-248 775.0
DYD3_k127_845717_1 Biotin carboxylase C-terminal domain K01961 - 6.3.4.14,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001708 578.0
DYD3_k127_845717_10 HEAT repeats - - - 0.0005726 51.0
DYD3_k127_845717_2 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 - 2.1.1.74 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000217 518.0
DYD3_k127_845717_3 tyrosine recombinase XerC K03733 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002754 265.0
DYD3_k127_845717_4 Domain of unknown function (DUF2437) - - - 0.000000000000000000000000000000000000000000000000000000000000000000002538 252.0
DYD3_k127_845717_5 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000000000001617 137.0
DYD3_k127_845717_6 Biotin-requiring enzyme - - - 0.000000000000000000000005375 107.0
DYD3_k127_845717_7 Fibronectin type III domain protein - - - 0.000000000000003515 89.0
DYD3_k127_845717_8 Putative regulatory protein - - - 0.000000001154 62.0
DYD3_k127_845717_9 AsmA-like C-terminal region K07289 - - 0.0000001506 64.0
DYD3_k127_872962_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1198.0
DYD3_k127_872962_1 drug transmembrane transporter activity K03327 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001582 405.0
DYD3_k127_872962_2 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 319.0
DYD3_k127_872962_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001815 270.0
DYD3_k127_872962_4 UPF0056 membrane protein K05595 - - 0.000000000000000000000000000000000000000000000000000000000000007246 243.0
DYD3_k127_872962_5 NUDIX domain - - - 0.00000000000000000000000000000000000000000000000000000005455 201.0
DYD3_k127_872962_6 CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin) K12340 - - 0.000000000000004968 88.0
DYD3_k127_923637_0 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K06147,K11085 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 537.0
DYD3_k127_923637_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006663 526.0
DYD3_k127_923637_10 DNA-directed 5'-3' RNA polymerase activity K03060 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030312,GO:0030880,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0071944,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.6 0.000000004609 59.0
DYD3_k127_923637_2 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K01598,K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005927 390.0
DYD3_k127_923637_3 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001345 275.0
DYD3_k127_923637_4 Uracil-DNA glycosylase K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000003332 251.0
DYD3_k127_923637_5 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.000000000000000000000000000000000000000000000000000000000006547 214.0
DYD3_k127_923637_6 PFAM Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000483 184.0
DYD3_k127_923637_7 TIGR00255 family - - - 0.00000000000000000000000000000000000000000000008144 180.0
DYD3_k127_923637_8 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.000000000031 73.0
DYD3_k127_923637_9 PFAM Glycosyl transferase, group 1 K12994 - 2.4.1.349 0.000000000999 71.0
DYD3_k127_935277_0 6-phosphofructokinase activity K00850,K00895,K21071 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005975,GO:0006002,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008443,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019200,GO:0019637,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044262,GO:0046835,GO:0046872,GO:0047334,GO:0071704,GO:1901135 2.7.1.11,2.7.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002786 601.0
DYD3_k127_935277_1 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002342 435.0
DYD3_k127_935277_2 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000001748 230.0
DYD3_k127_935277_3 4-vinyl reductase, 4VR K06382,K07013 - 3.1.3.16 0.00000000000000000000000000000000000000000000007177 188.0
DYD3_k127_935277_4 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.000000000000000000000000000000000000000000001939 184.0
DYD3_k127_935277_5 PFAM response regulator receiver - - - 0.0000000000000000000000006217 119.0
DYD3_k127_935277_6 protocatechuate 3,4-dioxygenase activity K00449 - 1.13.11.3 0.0000000000000000000001647 113.0
DYD3_k127_935277_7 - - - - 0.0000000000000004137 91.0
DYD3_k127_935277_8 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.0000000000001901 72.0
DYD3_k127_95894_0 phosphoribosylamine-glycine ligase activity K01919 - 6.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002313 427.0
DYD3_k127_95894_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005703 351.0
DYD3_k127_95894_2 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 295.0
DYD3_k127_95894_3 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000002609 268.0
DYD3_k127_95894_4 sarcosine oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000004291 254.0
DYD3_k127_95894_5 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000007681 234.0
DYD3_k127_95894_6 Proprotein convertase P-domain - - - 0.00000000000000000000000000000000000000003489 160.0
DYD3_k127_95894_7 long-chain fatty acid transporting porin activity K06076 - - 0.00000000000000000000000000000000001665 151.0
DYD3_k127_95894_8 - - - - 0.000000000000000000000000000006636 139.0
DYD3_k127_95894_9 Major Facilitator Superfamily - - - 0.0000000001309 65.0
DYD3_k127_965151_0 FeS assembly protein SufB K07033,K09014 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006790,GO:0008150,GO:0008152,GO:0009536,GO:0009842,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0031163,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044085,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0051186,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0071840 - 1.691e-265 822.0
DYD3_k127_965151_1 ABC transporter K09013 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141 382.0
DYD3_k127_965151_2 RelA SpoT domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 320.0
DYD3_k127_965151_3 FeS assembly protein SufD K09015 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005172 259.0
DYD3_k127_965151_4 cyclic nucleotide binding K04739,K10914 - - 0.00000000002199 75.0
DYD3_k127_965151_5 von Willebrand factor, type A K07114 - - 0.000002449 57.0
DYD3_k127_974223_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 1.117e-222 705.0
DYD3_k127_974223_1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003254 403.0
DYD3_k127_974223_2 Arginase family K01476 - 3.5.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005898 346.0
DYD3_k127_974223_3 Histidine kinase K01768,K02482,K02660,K03406,K05874,K07315,K10819,K11525,K11617 - 2.7.13.3,3.1.3.3,4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005931 354.0
DYD3_k127_974223_4 Sulfatase-modifying factor enzyme 1 K18912 - 1.14.99.50 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003289 306.0
DYD3_k127_974223_5 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.000000000000000000000000000000000000000000000000000000003995 206.0
DYD3_k127_974223_6 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0000900,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006355,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0016020,GO:0016043,GO:0017148,GO:0019219,GO:0019222,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030371,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045182,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051252,GO:0060255,GO:0065003,GO:0065007,GO:0070180,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0090079,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:1990904,GO:2000112,GO:2000113,GO:2001141 - 0.0000000000000000000000000000000009921 134.0
DYD3_k127_974223_7 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.0000000000008669 78.0
DYD3_k127_974223_8 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.0000000009533 63.0