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Overview

ID MAG00989
Name DYD3_bin.69
Sample SMP0027
Taxonomy
Kingdom Bacteria
Phylum Krumholzibacteriota
Class Krumholzibacteriia
Order G020349025
Family G020349025
Genus
Species
Assembly information
Completeness (%) 61.79
Contamination (%) 1.76
GC content (%) 68.0
N50 (bp) 5,498
Genome size (bp) 2,766,224

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2294

Gene name Description KEGG GOs EC E-value Score Sequence
DYD3_k127_1000872_0 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 314.0
DYD3_k127_1000872_1 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003082 277.0
DYD3_k127_1001368_0 acetyl-CoA carboxylase K01961 - 6.3.4.14,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002129 375.0
DYD3_k127_1001368_1 Ftsk_gamma K03466 - - 0.000000000000000000000000000000000000003082 163.0
DYD3_k127_1013157_0 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005691 342.0
DYD3_k127_1013157_1 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009792 307.0
DYD3_k127_1013157_2 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000000000000009122 225.0
DYD3_k127_1013157_3 Bacterial extracellular solute-binding proteins, family 5 Middle K02035,K13893 - - 0.0000000000000000000000000000000000000000000001776 192.0
DYD3_k127_1013157_4 Is also involved in protein lipoylation via its role as an octanoyl lipoyl carrier protein intermediate K02437 GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 - 0.000000000000000000000000000000000000000000001672 168.0
DYD3_k127_1013157_5 ATP-grasp domain K01945 - 6.3.4.13 0.0000000000000000000000000000000000002973 148.0
DYD3_k127_1013157_6 PFAM biotin lipoate A B protein ligase K03800 - 6.3.1.20 0.00000000000000000000000000000009286 144.0
DYD3_k127_1016168_0 AcrB/AcrD/AcrF family K03296 - - 0.0000000000000007282 83.0
DYD3_k127_1016168_1 Protein of unknown function (DUF1573) - - - 0.00001161 55.0
DYD3_k127_1026023_0 Carbohydrate phosphorylase K00688 - 2.4.1.1 2.167e-209 665.0
DYD3_k127_1026023_1 protein containing a von Willebrand factor type A (vWA) domain K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008773 511.0
DYD3_k127_1026023_2 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009109 265.0
DYD3_k127_1026023_3 gtp cyclohydrolase K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000008013 256.0
DYD3_k127_1026023_4 Memo-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000002901 255.0
DYD3_k127_1026023_5 sigma factor antagonist activity K04757,K17752 - 2.7.11.1 0.000000000000000000000000000000000000009896 150.0
DYD3_k127_1026023_6 translation release factor activity K03265 - - 0.00000000000000000000000004463 123.0
DYD3_k127_1026452_0 ECF sigma factor K03088 - - 0.0000000000000000000000000000000000007749 152.0
DYD3_k127_1026452_1 Putative zinc-finger - - - 0.0000984 52.0
DYD3_k127_1036773_0 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006031 453.0
DYD3_k127_1036773_1 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000000000001003 194.0
DYD3_k127_1036773_2 PFAM Glycosyl transferase, group 1 K13668 - 2.4.1.346 0.000000004187 70.0
DYD3_k127_1036773_3 MviN-like protein K03980 - - 0.0002144 53.0
DYD3_k127_1049506_0 PFAM Type II secretion system protein E - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 401.0
DYD3_k127_1049506_1 PFAM Type II secretion system protein E K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005239 351.0
DYD3_k127_1049506_2 Protein tyrosine kinase - - - 0.0000000000000000000000000000000000000000000000000001527 192.0
DYD3_k127_1051257_0 SMART Elongator protein 3 MiaB NifB - - - 1.784e-227 714.0
DYD3_k127_1051257_1 TIGRFAM phosphate ABC transporter, inner membrane subunit PstA K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001464 391.0
DYD3_k127_1051257_10 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000002722 62.0
DYD3_k127_1051257_2 TIGRFAM phosphate ABC transporter, inner membrane subunit PstC K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006308 381.0
DYD3_k127_1051257_3 ATPase-coupled phosphate ion transmembrane transporter activity K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000192 365.0
DYD3_k127_1051257_4 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 375.0
DYD3_k127_1051257_5 TIGRFAM phosphate binding protein K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005877 304.0
DYD3_k127_1051257_6 peptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000002706 228.0
DYD3_k127_1051257_7 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.0000000000000000000000000000000000000000000000000000033 196.0
DYD3_k127_1051257_8 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000002958 177.0
DYD3_k127_1051257_9 Plays a role in the regulation of phosphate uptake K02039 - - 0.0000000000000000000000004187 119.0
DYD3_k127_1052976_0 PFAM Aminotransferase class I and II K05825 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006556 505.0
DYD3_k127_1052976_1 PFAM cytochrome c assembly protein - - - 0.000000000000000000000000000000000000000000000000000000007584 212.0
DYD3_k127_1052976_2 Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment K07399 - - 0.00000000000000000000001324 115.0
DYD3_k127_1052976_3 amine dehydrogenase activity K21449 - - 0.00000000000000000000002418 104.0
DYD3_k127_1082637_0 ERAP1-like C-terminal domain K01256,K01263 - 3.4.11.14,3.4.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002294 463.0
DYD3_k127_1082637_1 extracellular matrix structural constituent - - - 0.00000000000001271 85.0
DYD3_k127_1090601_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006265 494.0
DYD3_k127_1090601_1 UDP-N-acetylglucosamine 2-epimerase K01791 - 5.1.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002415 436.0
DYD3_k127_1090601_2 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710,K12450 GO:0000166,GO:0000271,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005975,GO:0005976,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008460,GO:0009058,GO:0009059,GO:0009225,GO:0009226,GO:0009987,GO:0016051,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019305,GO:0019438,GO:0030312,GO:0033692,GO:0034637,GO:0034641,GO:0034645,GO:0034654,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044271,GO:0044281,GO:0044464,GO:0045226,GO:0046379,GO:0046383,GO:0046483,GO:0048037,GO:0050662,GO:0051287,GO:0055086,GO:0070404,GO:0071704,GO:0071944,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576 4.2.1.46,4.2.1.76 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002609 396.0
DYD3_k127_1090601_3 Glycosyltransferase, group 4 family K02851 - 2.7.8.33,2.7.8.35 0.0000000000000000000000000000000000000000000000000004709 198.0
DYD3_k127_1090601_4 AAA domain - - - 0.0000000000000004805 82.0
DYD3_k127_1109682_0 ATPase BadF BadG BcrA BcrD type - - - 1.154e-319 996.0
DYD3_k127_1109682_1 4 iron, 4 sulfur cluster binding - - - 8.788e-218 688.0
DYD3_k127_1109682_2 CoA enzyme activase uncharacterised domain (DUF2229) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000064 511.0
DYD3_k127_1109682_3 Tfp pilus assembly protein tip-associated adhesin K02674,K14379 - 3.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000022 311.0
DYD3_k127_1109682_4 cellulase activity K01081,K01179,K06931 - 3.1.3.5,3.2.1.4 0.000000000000000000000000000000000000000009858 180.0
DYD3_k127_1109682_5 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000001757 97.0
DYD3_k127_1109682_6 Subtilase family - - - 0.00009085 57.0
DYD3_k127_1111863_0 2-oxoglutarate dehydrogenase, E1 K00164 - 1.2.4.2 4.703e-195 620.0
DYD3_k127_1111863_1 endonuclease activity K07451 - - 0.000000000000006417 88.0
DYD3_k127_1119348_0 PFAM Integral membrane protein TerC K05794 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004849 361.0
DYD3_k127_1119348_1 PFAM peptidase T2 asparaginase 2 K01444,K13051 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.19.5,3.5.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000586 371.0
DYD3_k127_1119348_2 WD40-like Beta Propeller Repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001969 357.0
DYD3_k127_1119348_3 Belongs to the SfsA family K06206 - - 0.000000000000000000000000000000000000009237 166.0
DYD3_k127_1130365_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 4.826e-233 754.0
DYD3_k127_1130365_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007575 316.0
DYD3_k127_1130365_2 CDGSH-type zinc finger. Function unknown. - - - 0.000000000000000000000000000000000000000000000000000001208 204.0
DYD3_k127_1130365_3 cellulase activity - - - 0.00000166 62.0
DYD3_k127_1132549_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009799 599.0
DYD3_k127_1151877_0 EXOIII K02342 - 2.7.7.7 0.00000000000000000000000000000001459 138.0
DYD3_k127_1156087_0 Histidine kinase K02478 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000007238 276.0
DYD3_k127_1156087_1 glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000001714 231.0
DYD3_k127_1156087_2 Two component transcriptional regulator, LytTR family K02477,K07705 - - 0.000000000000000000000000000000000000000000000000000003786 199.0
DYD3_k127_1156087_3 ZIP Zinc transporter K16267 - - 0.000000000000000000000000000000000000008316 161.0
DYD3_k127_1160591_0 Belongs to the ParA family K04562 - - 0.0000004624 60.0
DYD3_k127_1176203_0 Nucleic acid binding K03698 - - 0.00000000000000000000000000000000000000000000000000000000000000004087 236.0
DYD3_k127_1176203_1 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 GO:0003674,GO:0003824,GO:0004857,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006950,GO:0006979,GO:0008150,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030234,GO:0043021,GO:0043022,GO:0043023,GO:0043086,GO:0044092,GO:0044424,GO:0044464,GO:0044877,GO:0050790,GO:0050896,GO:0065007,GO:0065009,GO:0098772 - 0.0000000000000000000000000000000000000000000000000000000007597 211.0
DYD3_k127_1176203_2 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.000000000000000000002217 98.0
DYD3_k127_117669_0 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K03151 GO:0000049,GO:0002937,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0017144,GO:0018130,GO:0019438,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0042364,GO:0042723,GO:0042724,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:0090304,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.8.1.4 0.00000000000000000000000000000000000000000000000000174 189.0
DYD3_k127_117669_1 endonuclease activity K07451 - - 0.00000000000000007012 95.0
DYD3_k127_1188128_0 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005293 549.0
DYD3_k127_1188128_1 mechanosensitive ion channel K22044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 375.0
DYD3_k127_1188128_2 ATPases associated with a variety of cellular activities K05847 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001309 264.0
DYD3_k127_1188128_3 of ABC-type glycine betaine transport system K05845 - - 0.0000000000000000000000000000000000000000000000000000000000000000009373 252.0
DYD3_k127_1188128_4 Potassium uptake protein, TrkH family K03498 - - 0.00000000000000000000000000000000000000000004625 165.0
DYD3_k127_1188128_5 Endonuclease Exonuclease Phosphatase - - - 0.00000000000000000000000000000000000000003847 162.0
DYD3_k127_1192828_0 2-oxoglutarate dehydrogenase, E1 K00164 - 1.2.4.2 0.000000000000000000000000000000000000000000000000000000000000000000004976 245.0
DYD3_k127_1192828_1 response regulator K07714 - - 0.00000000000000000000000000000000000000000000000000001295 214.0
DYD3_k127_1192828_2 acr, cog1678 K07735 - - 0.00000000000000000000000000000000000000000757 164.0
DYD3_k127_1192828_3 lipolytic protein G-D-S-L family K20306 - - 0.0000000003812 72.0
DYD3_k127_1195995_0 ATP:ADP antiporter activity K03301 - - 0.000000000000000000000000000000000000000000000000000000000000133 226.0
DYD3_k127_1195995_1 cyclic nucleotide binding K00384,K10914,K16922 - 1.8.1.9 0.000000000000000000000000000000000000000001125 169.0
DYD3_k127_119930_0 DNA topoisomerase type I activity K03168 - 5.99.1.2 8.291e-225 719.0
DYD3_k127_119930_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 4.045e-194 623.0
DYD3_k127_119930_2 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.0000000000000000000000000000000000000000000000000000000000000155 219.0
DYD3_k127_119930_3 Phage integrase, N-terminal SAM-like domain K04763 - - 0.00000000000000000000000000000000000000000000000000000000003946 222.0
DYD3_k127_119930_4 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 0.000000000000004726 87.0
DYD3_k127_1209646_0 mannose-1-phosphate guanylyltransferase activity K00971,K16011 - 2.7.7.13,5.3.1.8 0.000000000000000000000000000000000000000000000008315 184.0
DYD3_k127_1220511_0 Isocitrate/isopropylmalate dehydrogenase K00031 - 1.1.1.42 1.737e-211 668.0
DYD3_k127_1220511_1 Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation K00906 - 2.7.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005386 561.0
DYD3_k127_1220511_10 alpha beta - - - 0.00000000000000000001044 109.0
DYD3_k127_1220511_11 pfam set K07117 - - 0.00000000000000002454 96.0
DYD3_k127_1220511_2 imidazolonepropionase activity K01443 - 3.5.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002644 501.0
DYD3_k127_1220511_3 imidazolonepropionase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004531 405.0
DYD3_k127_1220511_4 cellulose binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002075 360.0
DYD3_k127_1220511_5 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.0000000000000000000000000000000000000000000000005606 181.0
DYD3_k127_1220511_6 chromosome segregation K03497 - - 0.0000000000000000000000000000000000114 147.0
DYD3_k127_1220511_7 Polynucleotide kinase 3 phosphatase - - - 0.0000000000000000000000000000000005548 150.0
DYD3_k127_1220511_8 Glycosyltransferase Family 4 - - - 0.000000000000000000000000345 122.0
DYD3_k127_1220511_9 cellulase activity - - - 0.00000000000000000000456 110.0
DYD3_k127_1227640_0 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 1.666e-201 637.0
DYD3_k127_1227640_1 transcriptional regulator - - - 0.000000000000000000000000000000000000004543 159.0
DYD3_k127_1227640_2 PFAM glycoside hydrolase family 13 domain protein - - - 0.00000001319 66.0
DYD3_k127_1229283_0 Inner membrane component of T3SS, cytoplasmic domain - - - 0.000000000000000000000000000000000000000000001662 182.0
DYD3_k127_1229283_1 COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL CutL homologs K11177 - 1.17.1.4 0.00000000000002341 86.0
DYD3_k127_124114_0 Bacterial sugar transferase K13012,K19428 - - 0.000000000000000000000000000000000000000000000000000001228 213.0
DYD3_k127_1255605_0 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175,K00177,K00187 - 1.2.7.11,1.2.7.3,1.2.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002066 508.0
DYD3_k127_1255605_1 Cytochrome c - - - 0.0000000000000000005722 94.0
DYD3_k127_1305336_0 cAMP biosynthetic process K08282,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009485 553.0
DYD3_k127_1305336_1 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002492 327.0
DYD3_k127_1305336_3 Iron-regulated membrane protein K09939 - - 0.000000000000000000000000000000000000000002743 161.0
DYD3_k127_1305336_5 cell septum assembly - - - 0.000000006834 68.0
DYD3_k127_1310138_0 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.000000000000000000104 104.0
DYD3_k127_1310138_1 guanyl-nucleotide exchange factor activity - - - 0.0000000000000000582 96.0
DYD3_k127_1315164_0 Uncharacterized protein conserved in bacteria (DUF2236) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005226 254.0
DYD3_k127_1315164_1 PFAM peptidase S1 and S6 chymotrypsin Hap - - - 0.00000000000000000000000000000000000000000000000000000000000000033 225.0
DYD3_k127_1315164_2 Membrane - - - 0.0000009299 61.0
DYD3_k127_1319370_0 PFAM amino acid permease-associated region K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000458 510.0
DYD3_k127_1319370_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007143 292.0
DYD3_k127_1319370_2 Serine/threonine phosphatases, family 2C, catalytic domain K01090,K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001209 276.0
DYD3_k127_1319370_3 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 GO:0003674,GO:0003824,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000006041 234.0
DYD3_k127_1321851_0 Pfam Transposase IS66 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 323.0
DYD3_k127_1321851_1 Bacterial extracellular solute-binding protein, family 7 K11688,K21395 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002496 253.0
DYD3_k127_1321851_2 TRAP transporter T-component - - - 0.00000000000000000000000000000007458 137.0
DYD3_k127_1321851_3 - - - - 0.000000000000000000000000004526 125.0
DYD3_k127_1321851_4 FMN binding K03612 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000944 102.0
DYD3_k127_1363358_0 SMART Elongator protein 3 MiaB NifB - - - 7.04e-199 651.0
DYD3_k127_1363358_1 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 GO:0001510,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016782,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0035596,GO:0035597,GO:0035600,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050497,GO:0051536,GO:0051539,GO:0051540,GO:0071704,GO:0090304,GO:1901360 2.8.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001524 508.0
DYD3_k127_1363358_2 CAAX protease self-immunity K07052 - - 0.00000003585 59.0
DYD3_k127_1370287_0 Molybdopterin oxidoreductase - - - 0.0 1504.0
DYD3_k127_1370287_1 CHAT domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004371 428.0
DYD3_k127_1370287_2 Cytochrome c K00373,K00405,K17052 GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016530,GO:0022607,GO:0034622,GO:0042126,GO:0042128,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044281,GO:0044424,GO:0044464,GO:0051131,GO:0065003,GO:0071704,GO:0071840,GO:0071941,GO:0140104,GO:2001057 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006978 309.0
DYD3_k127_1370287_3 NAD(P)H-binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005111 294.0
DYD3_k127_1370287_4 COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related K01438 - 3.5.1.16 0.000000000000000000000000000000000000000000000000000000000003563 234.0
DYD3_k127_1370287_5 radical SAM K06871 - - 0.0000000000000000000000000000000000000000000000007298 179.0
DYD3_k127_1370287_6 Serine threonine protein kinase - - - 0.00000000000000000000000000000000000000000000004803 189.0
DYD3_k127_1370287_7 Transcriptional regulator - - - 0.00000000000000000000000000002368 123.0
DYD3_k127_1370287_8 Iron permease FTR1 family K07243 - - 0.00000000000000000000000001355 123.0
DYD3_k127_1370287_9 4 iron, 4 sulfur cluster binding - - - 0.00000002547 60.0
DYD3_k127_1370295_0 Prolyl oligopeptidase, N-terminal beta-propeller domain - - - 1.569e-201 652.0
DYD3_k127_1370295_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02474,K13015 - 1.1.1.136 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001291 466.0
DYD3_k127_1370295_10 Protein of unknown function (DUF2905) - - - 0.0000000000000002594 81.0
DYD3_k127_1370295_11 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.000000000000001083 89.0
DYD3_k127_1370295_12 helix_turn_helix, mercury resistance K13640 - - 0.000000000000004264 82.0
DYD3_k127_1370295_13 endonuclease I - - - 0.0000000000125 75.0
DYD3_k127_1370295_14 FlgD Ig-like domain K14194,K19668 - 3.2.1.91 0.00000001151 66.0
DYD3_k127_1370295_2 Pyridine nucleotide-disulphide oxidoreductase K00266,K00528,K17722 - 1.18.1.2,1.19.1.1,1.3.1.1,1.4.1.13,1.4.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005545 439.0
DYD3_k127_1370295_3 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 GO:0000287,GO:0003674,GO:0003824,GO:0004799,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006220,GO:0006221,GO:0006231,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009157,GO:0009162,GO:0009165,GO:0009176,GO:0009177,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009314,GO:0009394,GO:0009628,GO:0009987,GO:0016740,GO:0016741,GO:0018130,GO:0019438,GO:0019637,GO:0019692,GO:0032259,GO:0034641,GO:0034654,GO:0042083,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046073,GO:0046385,GO:0046483,GO:0046872,GO:0050896,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 409.0
DYD3_k127_1370295_4 peptide-methionine (S)-S-oxide reductase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000006284 245.0
DYD3_k127_1370295_5 PFAM purine or other phosphorylase family 1 K00757 - 2.4.2.3 0.000000000000000000000000000000000000000000000000000000000000000001016 235.0
DYD3_k127_1370295_6 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.00000000000000000000000000000000000000000000000000007169 194.0
DYD3_k127_1370295_7 Haloacid dehalogenase-like hydrolase K07025 - - 0.00000000000000000000000000000000000000000003138 170.0
DYD3_k127_1370295_8 Domain of unknown function (DUF309) K09763 - - 0.00000000000000000000000000006189 124.0
DYD3_k127_1370295_9 protein maturation K13628 - - 0.00000000000000000000000001078 115.0
DYD3_k127_1372525_0 Bacterial regulatory protein, Fis family K02584 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002313 291.0
DYD3_k127_1372525_1 PFAM O-Antigen ligase - - - 0.00000000002094 76.0
DYD3_k127_137656_0 Bacterial protein of unknown function (DUF885) - - - 7.104e-195 627.0
DYD3_k127_137656_1 Putative auto-transporter adhesin, head GIN domain - - - 0.000000000000000000000000002261 113.0
DYD3_k127_1408970_0 PFAM acetyl-CoA hydrolase transferase K01067 - 3.1.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 541.0
DYD3_k127_1408970_1 Pyruvate:ferredoxin oxidoreductase core domain II K00186 - 1.2.7.7 0.000000000000000000000008633 101.0
DYD3_k127_1408970_2 4Fe-4S dicluster domain K00176 - 1.2.7.3 0.000000000000000005086 87.0
DYD3_k127_1437293_0 benzoyl-CoA oxygenase K15512 - 1.14.13.208 2.899e-219 700.0
DYD3_k127_1437293_1 Enoyl-CoA hydratase/isomerase K15513 - 4.1.2.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 315.0
DYD3_k127_1437293_2 Domain of unknown function (DUF4162) K01990 - - 0.00000000000000000000000000001341 122.0
DYD3_k127_1441105_0 PhoD-like phosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003226 381.0
DYD3_k127_1449002_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1289.0
DYD3_k127_1449002_1 Relaxes both positive and negative superturns and exhibits a strong decatenase activity K03167 - 5.99.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006383 560.0
DYD3_k127_1449002_2 DNA topoisomerase VI subunit A K03166 - 5.99.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003564 493.0
DYD3_k127_14509_0 Highly conserved protein containing a thioredoxin domain - - - 0.00000000000000000000000000000000000000000000000000000000000007375 225.0
DYD3_k127_14509_1 DEAD DEAH box helicase K03724 - - 0.0000000000000000000000000000000000000000000000000008128 191.0
DYD3_k127_1457943_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 3.724e-266 834.0
DYD3_k127_1457943_1 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002117 413.0
DYD3_k127_1457943_2 PFAM Glycosyl Hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004666 332.0
DYD3_k127_1457943_4 lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000000000000000000000000000000000000000000001622 250.0
DYD3_k127_1457943_5 Domain of unknown function DUF11 - - - 0.00000000000000000000000000000000001248 156.0
DYD3_k127_1457943_6 Histidine kinase K07651 - 2.7.13.3 0.00000000000000000000000475 116.0
DYD3_k127_1457943_7 - - - - 0.000000000000006858 89.0
DYD3_k127_1457943_8 xylanase chitin deacetylase - - - 0.0002057 53.0
DYD3_k127_146420_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823,K15372 - 2.6.1.19,2.6.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002763 471.0
DYD3_k127_146420_1 Carbon-nitrogen hydrolase K01431,K12251 - 3.5.1.53,3.5.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008035 423.0
DYD3_k127_146420_2 ATP ADP translocase K03301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005279 328.0
DYD3_k127_146420_3 PFAM Class II aldolase adducin K01628 - 4.1.2.17 0.00000000000000000000000000000000000000000000000000000000001048 218.0
DYD3_k127_146420_4 response regulator, receiver K03407 - 2.7.13.3 0.00000000000000000157 95.0
DYD3_k127_146420_5 YacP-like NYN domain K06962 - - 0.000000009342 63.0
DYD3_k127_146420_6 Protein of unknown function (DUF1697) - - - 0.000003731 56.0
DYD3_k127_1472552_0 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000000000000000000000006221 188.0
DYD3_k127_1472552_1 Hydrolase Family 16 - - - 0.0000000000000000000000000000001742 138.0
DYD3_k127_1472552_2 - - - - 0.0002309 48.0
DYD3_k127_1478634_0 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.0000000000000000000000000000000000000000000000000000000000000000003121 236.0
DYD3_k127_1478634_1 - - - - 0.00000000000000000000000000000008115 139.0
DYD3_k127_1478634_2 Restriction endonuclease K07448 - - 0.0000000001167 68.0
DYD3_k127_1483299_0 Belongs to the heme-copper respiratory oxidase family K02274 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000292 248.0
DYD3_k127_1483299_1 PFAM cytochrome c oxidase subunit II K02275 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000009549 229.0
DYD3_k127_1485203_0 glycosyl transferase family K00697,K16055 - 2.4.1.15,2.4.1.347,3.1.3.12 2.647e-257 818.0
DYD3_k127_1485203_1 ATPases associated with a variety of cellular activities K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003661 271.0
DYD3_k127_1485203_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000005096 244.0
DYD3_k127_1485203_3 Barrel-sandwich domain of CusB or HlyD membrane-fusion K02005 - - 0.000000000000000000000000000000000000000000000000000000001527 217.0
DYD3_k127_1485203_4 MacB-like periplasmic core domain K02004 - - 0.00000000000000008408 89.0
DYD3_k127_1486142_0 ABC transporter K06020 - 3.6.3.25 2.131e-221 701.0
DYD3_k127_1488084_0 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007782 417.0
DYD3_k127_1488084_1 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.00000000000000009724 90.0
DYD3_k127_1488084_2 EamA-like transporter family K15268 - - 0.00000000000000987 85.0
DYD3_k127_1488084_3 protein catabolic process - - - 0.000000004797 58.0
DYD3_k127_1491018_0 Tryptophanyl-tRNA synthetase K01867 GO:0003674,GO:0003824,GO:0004812,GO:0004830,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006436,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004385 351.0
DYD3_k127_1491018_1 Tyrosine recombinase XerD K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004216 274.0
DYD3_k127_1491018_2 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.00000000000000000000000000000000000000000000000000000000000000002683 237.0
DYD3_k127_1491018_3 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000688 141.0
DYD3_k127_1496117_0 Protein tyrosine kinase K08282,K12132 - 2.7.11.1 0.0 1071.0
DYD3_k127_1496117_1 DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity K03581 - 3.1.11.5 1.827e-216 696.0
DYD3_k127_1496117_10 COG0457 FOG TPR repeat - - - 0.000003217 59.0
DYD3_k127_1496117_2 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 3.141e-195 646.0
DYD3_k127_1496117_3 COG0515 Serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005466 481.0
DYD3_k127_1496117_4 PFAM Radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001617 256.0
DYD3_k127_1496117_5 PFAM RNA binding S1 domain protein K02945 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002412 257.0
DYD3_k127_1496117_6 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.000000000000000000000000000000000000000000000000000000000000000004893 229.0
DYD3_k127_1496117_7 COG0720 6-pyruvoyl-tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000000000000000003652 155.0
DYD3_k127_1496117_8 - - - - 0.000000000000000000000000000000000000003663 148.0
DYD3_k127_1496526_0 lysine biosynthetic process via aminoadipic acid - - - 1.838e-278 885.0
DYD3_k127_1518549_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 2.463e-228 719.0
DYD3_k127_1537143_0 Belongs to the heme-copper respiratory oxidase family K02274 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004831 489.0
DYD3_k127_1537143_1 Cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000001597 260.0
DYD3_k127_1537143_2 cytochrome c oxidase, subunit III K02276 - 1.9.3.1 0.0000000000000000000000000000000003191 149.0
DYD3_k127_1537143_3 Zinc metalloprotease (Elastase) - - - 0.0000000000000000000008515 111.0
DYD3_k127_1538129_0 exonuclease activity K16899 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000003359 244.0
DYD3_k127_1538129_1 Uncharacterized protein conserved in bacteria (DUF2330) - - - 0.00000000009159 73.0
DYD3_k127_1540820_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00334,K00335 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009506 527.0
DYD3_k127_1540820_1 formate dehydrogenase (NAD+) activity K00336,K18006 - 1.12.1.2,1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000459 385.0
DYD3_k127_1540820_2 quinone binding K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005405 312.0
DYD3_k127_1555635_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138,K18307 - - 0.0 1415.0
DYD3_k127_1555635_1 Magnesium chelatase, subunit ChlI C-terminal K07391 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002249 449.0
DYD3_k127_1555635_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003215 374.0
DYD3_k127_1555635_3 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 - - 0.000000000000000000000000000000000000000000000000000000000000002155 223.0
DYD3_k127_1555635_4 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K04750 - - 0.000000000000000000000000000000000000000000002379 181.0
DYD3_k127_1555635_5 Bacterial antitoxin of type II TA system, VapB - - - 0.000000000000000002712 92.0
DYD3_k127_1555635_6 outer membrane efflux protein - - - 0.0000000009889 66.0
DYD3_k127_1563655_0 Alternative locus ID K00162 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004107 407.0
DYD3_k127_1563655_1 undecaprenyl-phosphate glucose phosphotransferase activity - - - 0.00000000000000000000000000000000000000000000000000006434 192.0
DYD3_k127_1568382_0 Sodium:sulfate symporter transmembrane region - - - 0.0000000000000000000000000000000000000000000000000000001534 214.0
DYD3_k127_1568382_1 extracellular matrix structural constituent - - - 0.0000000000000003258 89.0
DYD3_k127_158743_0 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01738,K01883,K12339 - 2.5.1.47,6.1.1.16 0.00000000000000000000000000000000000000000000000000000000001593 209.0
DYD3_k127_158743_1 proteolysis K21140,K21147 - 2.7.7.80,2.8.1.11,3.13.1.6 0.0000000000000000000000000000008083 130.0
DYD3_k127_1600331_0 amine dehydrogenase activity - - - 2.97e-260 837.0
DYD3_k127_1600331_1 Histidine kinase-like ATPase domain K04757 - 2.7.11.1 0.00000000002002 70.0
DYD3_k127_1600331_2 antisigma factor binding K04749 - - 0.0000003362 56.0
DYD3_k127_1614968_0 Belongs to the ABC transporter superfamily K02031,K02032,K15583 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007029 319.0
DYD3_k127_1614968_1 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002012 267.0
DYD3_k127_1614968_2 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02034 - - 0.00000007742 54.0
DYD3_k127_1616676_0 Belongs to the GARS family K01945 - 6.3.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001664 361.0
DYD3_k127_1616676_1 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004085 312.0
DYD3_k127_1616676_2 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000000000000000000000000000000000002954 168.0
DYD3_k127_1616676_3 Low molecular weight phosphotyrosine protein phosphatase K01104,K20201 - 3.1.3.48,3.9.1.2 0.0000000000000000000000003565 117.0
DYD3_k127_1616676_4 Belongs to the SUA5 family K07566 - 2.7.7.87 0.0000000000000005106 86.0
DYD3_k127_1638303_0 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004844 493.0
DYD3_k127_1638303_1 Trypsin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000188 360.0
DYD3_k127_1638303_2 FlgD Ig-like domain - - - 0.0003671 54.0
DYD3_k127_1640346_0 PFAM Cys Met metabolism pyridoxal-phosphate-dependent K01761 - 4.4.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003898 592.0
DYD3_k127_1640346_1 - - - - 0.000000000000000000000000000000000000000000002094 167.0
DYD3_k127_1640346_3 Fibronectin type 3 domain - - - 0.000005332 61.0
DYD3_k127_1640346_4 long-chain fatty acid transport protein - - - 0.00005092 55.0
DYD3_k127_164625_0 Peptidase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001409 445.0
DYD3_k127_164625_1 PFAM NAD binding domain of 6-phosphogluconate dehydrogenase K00020,K00042 - 1.1.1.31,1.1.1.60 0.0000000000000000000000000000000000000000000000000000000000000000000000001407 255.0
DYD3_k127_164625_2 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000002065 185.0
DYD3_k127_164625_3 tetraacyldisaccharide 4'-kinase activity K09791 - - 0.00000000000000000004994 92.0
DYD3_k127_1654313_0 Cytochrome b(N-terminal)/b6/petB K00410,K00412,K02635,K02637 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001891 424.0
DYD3_k127_1654313_1 Rieske [2Fe-2S] domain K00411,K02636,K03886 - 1.10.2.2,1.10.9.1 0.000000000000000000000000000000000002301 148.0
DYD3_k127_1654313_2 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.00000000000122 69.0
DYD3_k127_1658321_0 ROK family K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000002944 241.0
DYD3_k127_1658321_1 involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744,K09774 - - 0.0000000000000000000000000000000000000000000000000000000000000000003452 262.0
DYD3_k127_1660270_0 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000000000000000000000000000000000000000000000000002611 217.0
DYD3_k127_1662238_0 peptidase S9 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007963 451.0
DYD3_k127_1662238_1 PFAM Peptidase M56, BlaR1 - - - 0.00000000000446 79.0
DYD3_k127_1662518_0 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001887 310.0
DYD3_k127_1662518_1 Belongs to the peptidase S8 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 307.0
DYD3_k127_1663152_0 Insulinase (Peptidase family M16) K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007252 524.0
DYD3_k127_1663152_1 Insulinase (Peptidase family M16) K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000001365 238.0
DYD3_k127_1663152_2 amine dehydrogenase activity - - - 0.0000000000000003255 84.0
DYD3_k127_1676352_0 Rubrerythrin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001234 258.0
DYD3_k127_1676352_1 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000002105 209.0
DYD3_k127_1676352_2 Cysteine-rich domain K00113 - 1.1.5.3 0.000000000000000000000000000000000000000000000000003203 185.0
DYD3_k127_1676352_3 Ferric uptake regulator, Fur family K03711,K09825 GO:0003674,GO:0003700,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2000374,GO:2001141 - 0.00000000000000000000549 98.0
DYD3_k127_1691376_0 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.000000000000000000000000000008777 123.0
DYD3_k127_1691376_1 - - - - 0.000002013 61.0
DYD3_k127_1705383_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 3.6.3.14 8.466e-221 694.0
DYD3_k127_1705383_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00000000000000000000000000000000000000000000000000000000000000000002929 242.0
DYD3_k127_1705383_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.000000000000000000000000000000000000000000000000007544 184.0
DYD3_k127_1705383_3 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.00000000000000000001318 97.0
DYD3_k127_1714580_0 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.00000000000000000000000000000000000000000000001847 179.0
DYD3_k127_1714580_1 Double zinc ribbon - - - 0.0000003441 56.0
DYD3_k127_1726236_0 Aldo/keto reductase family K05882 - 1.1.1.91 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007033 458.0
DYD3_k127_1726236_1 Domain of unknown function (DUF3943) - - - 0.0000000000000000000000000000000000000000000000000000000000000000005651 248.0
DYD3_k127_1726236_2 histidine kinase, HAMP K13598 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000003015 250.0
DYD3_k127_1726236_3 DoxX K15977 - - 0.000000000000000000000000000000000000003758 151.0
DYD3_k127_1726236_4 EamA-like transporter family - - - 0.000000000000000000000000000000000000004147 158.0
DYD3_k127_1726236_5 Protein-disulfide isomerase - - - 0.000000000000000000000009455 115.0
DYD3_k127_1726236_6 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000004323 62.0
DYD3_k127_1726236_7 Peptidase C14 caspase catalytic subunit p20 - - - 0.0000002275 63.0
DYD3_k127_1741355_0 Belongs to the ABC transporter superfamily K02032,K10823 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001291 448.0
DYD3_k127_1741355_1 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.00000000001071 69.0
DYD3_k127_1747172_0 molybdate ABC transporter, permease protein K02017,K02018 - 3.6.3.29 0.00000000000000000000000000000000000000000000000000119 203.0
DYD3_k127_1747172_1 ABC transporter K02017 - 3.6.3.29 0.0000000000000000001222 102.0
DYD3_k127_1747172_2 Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system K02017 - 3.6.3.29 0.000002971 55.0
DYD3_k127_1782202_0 bacteriocin transport K03561 - - 0.00000000000000000000000000000000000000000000000000000002996 209.0
DYD3_k127_1782202_1 Peptidase M56 - - - 0.00000000000002973 83.0
DYD3_k127_1790708_0 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001867 312.0
DYD3_k127_1790708_1 Peptidoglycan-synthase activator LpoB - - - 0.0000000000002637 77.0
DYD3_k127_1790708_2 - - - - 0.0000000285 66.0
DYD3_k127_1806448_0 Glycosyltransferase like family 2 K03606,K07011 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000147 273.0
DYD3_k127_182682_0 Male sterility protein K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000811 264.0
DYD3_k127_182682_1 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase - - - 0.000000000000000000000000000000000000209 153.0
DYD3_k127_182682_2 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.000000000000000000000000007412 121.0
DYD3_k127_1831370_0 Aminoacyl-tRNA editing domain K01881 - 6.1.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000142 277.0
DYD3_k127_1831370_1 Binds directly to 16S ribosomal RNA K02968 - - 0.000003958 59.0
DYD3_k127_1832170_0 TIGRFAM Outer membrane protein K13735,K20276 - - 0.000000005474 69.0
DYD3_k127_1832170_1 long-chain fatty acid transport protein - - - 0.000002831 61.0
DYD3_k127_1833338_0 Putative modulator of DNA gyrase K03568 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003785 532.0
DYD3_k127_1833338_1 Peptidase U62 modulator of DNA gyrase K03592 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005939 391.0
DYD3_k127_1833338_2 Uncharacterized protein conserved in bacteria (DUF2330) - - - 0.0000000000001692 78.0
DYD3_k127_1833338_3 Mg-dependent DNase K03424 GO:0003674,GO:0003824,GO:0004518,GO:0004536,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016787,GO:0016788,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901361,GO:1901575 - 0.0000005079 55.0
DYD3_k127_1843266_0 MotA/TolQ/ExbB proton channel family K03561 - - 0.000000000000000000002948 101.0
DYD3_k127_1843266_1 Tetratricopeptide repeat - - - 0.00000000000000001266 98.0
DYD3_k127_1843266_2 tetratricopeptide repeat - - - 0.0000000000000001756 95.0
DYD3_k127_1843266_4 Belongs to the peptidase S8 family - - - 0.00004243 57.0
DYD3_k127_1843266_5 FlgD Ig-like domain - - - 0.00005437 57.0
DYD3_k127_1844492_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000007078 195.0
DYD3_k127_1844927_0 4Fe-4S binding domain - - - 1.838e-260 831.0
DYD3_k127_1844927_1 Amidinotransferase K01478 - 3.5.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001531 280.0
DYD3_k127_1844927_2 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.0000000000000000000000000000000000000000000000000000000001526 233.0
DYD3_k127_1844927_3 Thioesterase-like superfamily K07107 - - 0.0000000000000000001318 100.0
DYD3_k127_1844927_4 cellulose binding - - - 0.0001783 55.0
DYD3_k127_185489_0 Stage II sporulation protein K06381 - - 0.00000000000000000000000000000000000000000000000000008398 206.0
DYD3_k127_185489_1 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.000000000000000000000000000000000000000000001104 176.0
DYD3_k127_185489_2 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.000000000000000000000000000004139 127.0
DYD3_k127_185489_3 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.000000000000000001307 90.0
DYD3_k127_185489_4 Histidine phosphatase superfamily (branch 1) K08296 - - 0.00000002371 60.0
DYD3_k127_1855778_0 Glycosyl transferase family 21 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 372.0
DYD3_k127_1855778_1 Glycosyl transferase, family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000002233 250.0
DYD3_k127_1855778_2 Protein of unknown function, DUF547 - - - 0.0000000000000000000000000000000000000000004624 181.0
DYD3_k127_1855778_3 Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000125 162.0
DYD3_k127_1855778_4 NHL repeat - - - 0.000005001 59.0
DYD3_k127_1862877_0 TrkA-N domain K03499 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006215 350.0
DYD3_k127_1862877_1 Sodium:dicarboxylate symporter family K03309 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 343.0
DYD3_k127_1862877_2 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 338.0
DYD3_k127_1862877_3 Belongs to the peptidase S8 family K01342 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005576,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030193,GO:0030195,GO:0032101,GO:0032102,GO:0042730,GO:0043170,GO:0044238,GO:0048519,GO:0048583,GO:0048585,GO:0050789,GO:0050818,GO:0050819,GO:0050878,GO:0051239,GO:0051241,GO:0061041,GO:0061045,GO:0065007,GO:0065008,GO:0070011,GO:0071704,GO:0080134,GO:0140096,GO:1900046,GO:1900047,GO:1901564,GO:1903034,GO:1903035 3.4.21.62 0.000000000000000000000000000000000000000000000000000000000000000000001106 251.0
DYD3_k127_1862877_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000002699 239.0
DYD3_k127_1862877_5 N-terminal domain of galactosyltransferase - - - 0.00000000000000000000000000000000000000000001992 175.0
DYD3_k127_1873073_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 298.0
DYD3_k127_1873073_1 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.0000000000000000008754 98.0
DYD3_k127_1898922_0 Belongs to the UbiD family K03182 - 4.1.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001939 596.0
DYD3_k127_1898922_1 Belongs to the DEAD box helicase family K03732,K05592 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006597 505.0
DYD3_k127_1898922_2 PFAM UbiA prenyltransferase K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000005584 278.0
DYD3_k127_1898922_3 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000005501 202.0
DYD3_k127_1898922_4 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.00000000000000000000000000000000000000000000007906 179.0
DYD3_k127_1898922_5 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.000000000000000000000000000000000000000000006527 177.0
DYD3_k127_1898922_6 Zn peptidase - - - 0.00000000000000000000000000000000000000000001139 186.0
DYD3_k127_1898922_7 PFAM Haloacid dehalogenase domain protein hydrolase K01101 - 3.1.3.41 0.00000000000000000000000000000000000000008518 173.0
DYD3_k127_1898922_8 glycosyl transferase group 1 - - - 0.00000000000000000000004663 113.0
DYD3_k127_1898922_9 Glycosyltransferase family 87 K13671 - - 0.00004151 56.0
DYD3_k127_190144_0 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001671 364.0
DYD3_k127_1908429_0 COG1192 ATPases involved in chromosome partitioning K03496 GO:0008150,GO:0022603,GO:0042173,GO:0042174,GO:0043937,GO:0043939,GO:0045595,GO:0045596,GO:0048519,GO:0048523,GO:0050789,GO:0050793,GO:0050794,GO:0051093,GO:0065007 - 0.0000000000000000000000000000000000000000000000000000001001 209.0
DYD3_k127_1929354_0 nitrile biosynthetic process - - - 0.00000000000000009829 92.0
DYD3_k127_1935026_0 Carbamoyltransferase C-terminus K00612 - - 8.02e-252 790.0
DYD3_k127_1935026_1 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 448.0
DYD3_k127_1935026_10 amino acid activation for nonribosomal peptide biosynthetic process K01183 - 3.2.1.14 0.0000000001974 73.0
DYD3_k127_1935026_11 - - - - 0.00000007062 60.0
DYD3_k127_1935026_2 Catalyzes the NAD( )-dependent oxidation of L-threonine to 2-amino-3-ketobutyrate K00060 - 1.1.1.103 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004476 428.0
DYD3_k127_1935026_3 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001162 282.0
DYD3_k127_1935026_4 glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007715 254.0
DYD3_k127_1935026_5 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000009906 224.0
DYD3_k127_1935026_6 GlcNAc-PI de-N-acetylase K01463 - - 0.00000000000000000000000000000000000002966 152.0
DYD3_k127_1935026_7 - - - - 0.00000000000008966 73.0
DYD3_k127_1935026_9 - - - - 0.00000000001849 76.0
DYD3_k127_19426_0 Creatinine amidohydrolase K01470 - 3.5.2.10 2.277e-290 913.0
DYD3_k127_19426_1 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K19802 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016854,GO:0034641,GO:0043167,GO:0043169,GO:0043603,GO:0044237,GO:0046872,GO:0071704,GO:1901564 5.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004438 304.0
DYD3_k127_19426_2 Domain of unknown function (DUF1611_N) Rossmann-like domain - - - 0.0000000000001841 72.0
DYD3_k127_1950846_0 ferredoxin oxidoreductase K00174 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0030312,GO:0044464,GO:0050896,GO:0055114,GO:0071944 1.2.7.11,1.2.7.3 4.821e-249 785.0
DYD3_k127_1950846_1 PFAM amidohydrolase K01464 - 3.5.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007077 600.0
DYD3_k127_1950846_2 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016491,GO:0016625,GO:0016903,GO:0016999,GO:0017144,GO:0019752,GO:0030312,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0046872,GO:0047553,GO:0055114,GO:0071704,GO:0071944,GO:0072350 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003401 445.0
DYD3_k127_1950846_3 Sarcosine oxidase - - - 0.0000000000000000000000000000000000000000000000000000003218 214.0
DYD3_k127_1950935_0 TIGRFAM succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 - 1.3.5.1,1.3.5.4 3.031e-244 771.0
DYD3_k127_1950935_1 succinate dehydrogenase K00241,K00247 - - 0.0000000000000000000000000000000000000000000001966 175.0
DYD3_k127_1955595_0 - - - - 0.000000000000000000000000000000000000000000000000003949 188.0
DYD3_k127_1955595_1 Domain of unknown function (DUF4331) - - - 0.0000000000000000000000000000000000000339 152.0
DYD3_k127_1955595_2 Belongs to the sigma-70 factor family. ECF subfamily - - - 0.000000000000000000000000000000003278 137.0
DYD3_k127_1955595_3 PFAM methyltransferase - - - 0.0000000000000000002223 97.0
DYD3_k127_1955595_4 PFAM Anti-sigma-K factor RskA - - - 0.00002731 55.0
DYD3_k127_1959203_0 TIGRFAM Dihydroorotate dehydrogenase K17723 - 1.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002708 361.0
DYD3_k127_1959203_1 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004263 315.0
DYD3_k127_1959203_2 COG3806 Anti-sigma factor - - - 0.0000000000000001447 87.0
DYD3_k127_1963832_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004525 526.0
DYD3_k127_1963832_1 4Fe-4S binding domain K08358 - - 0.000000000000000000000000000000000000000000000000000000000000000000002627 238.0
DYD3_k127_1963832_2 - - - - 0.00000000000000000000000000000000002705 147.0
DYD3_k127_1964766_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009636 372.0
DYD3_k127_1964766_1 SecD/SecF GG Motif K03074 - - 0.00000000000000000000000000000000000000000000000000000000000003842 226.0
DYD3_k127_1964766_2 Protein tyrosine kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000002534 184.0
DYD3_k127_1964766_3 Protein of unknown function (DUF456) K09793 - - 0.00000000000000002487 88.0
DYD3_k127_1967926_0 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004922 338.0
DYD3_k127_1967926_1 HD domain - - - 0.000000000000000000000000000000000000000000000000231 184.0
DYD3_k127_1967926_2 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.00000000000000000000003389 100.0
DYD3_k127_1967926_3 ABC-2 family transporter protein K01992 - - 0.000000000007597 67.0
DYD3_k127_1968130_0 Subtilase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 552.0
DYD3_k127_1968130_1 - - - - 0.0000000000000000000000000000000001488 139.0
DYD3_k127_1968130_2 FlgD Ig-like domain - - - 0.000000000000000294 94.0
DYD3_k127_1968130_3 extracellular matrix structural constituent - - - 0.000006704 49.0
DYD3_k127_1989748_0 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000209 381.0
DYD3_k127_1989748_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003714 354.0
DYD3_k127_1989748_2 peptidyl-lysine modification to peptidyl-hypusine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006799 294.0
DYD3_k127_1989748_3 Sugar transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001753 246.0
DYD3_k127_1989748_4 SMART AAA ATPase K02450 - - 0.0000000000000000000000000000000000000000000000000000000227 220.0
DYD3_k127_1989748_5 PFAM sugar transferase - - - 0.0000000000000000000000000000000000000000000000000000007349 202.0
DYD3_k127_1989748_6 Protein of unknown function (DUF3108) - - - 0.000000000000000000000000000000000000000000001818 174.0
DYD3_k127_1989748_7 PFAM glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000001068 152.0
DYD3_k127_2003503_0 PFAM cytochrome c biogenesis protein, transmembrane region - - - 0.0000000000000000000000000000001138 140.0
DYD3_k127_2003503_1 Protein of unknown function (DUF1573) - - - 0.00000001171 61.0
DYD3_k127_2003503_2 protein BT4048 SWALL AAO79153 (EMBL AE016943) (373 aa) fasta scores E() - - - 0.00001308 52.0
DYD3_k127_2006804_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600,K00605,K18847 - 2.1.2.1,2.1.2.10,2.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008866 597.0
DYD3_k127_2006804_1 gamma-carboxymuconolactone decarboxylase subunit - - - 0.000000000000002162 77.0
DYD3_k127_2033877_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003102 546.0
DYD3_k127_2033877_1 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 GO:0000166,GO:0003674,GO:0003824,GO:0003951,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006741,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.23 0.0000000000000000000000000000000000000000000000009486 185.0
DYD3_k127_2033877_2 Anthranilate synthase component I, N terminal region K01657,K13503 - 4.1.3.27 0.000000005299 62.0
DYD3_k127_2034209_0 Evidence 5 No homology to any previously reported sequences K09607 - - 0.00000000000000000000000000000000000000000000000319 199.0
DYD3_k127_2034209_1 long-chain fatty acid transporting porin activity - - - 0.00000000000000000000000000001179 135.0
DYD3_k127_204947_0 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.0000000000000000000000000000000000000000000000000000000001933 211.0
DYD3_k127_204947_1 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.00000000000000000009804 101.0
DYD3_k127_204947_2 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.0000000000000001178 91.0
DYD3_k127_204947_3 - - - - 0.00000000001398 76.0
DYD3_k127_2055898_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000001617 241.0
DYD3_k127_2055898_1 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.000000000000000000000000000000000000000000000000000000002867 206.0
DYD3_k127_2059430_0 radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 432.0
DYD3_k127_2059430_1 Protein of unknown function, DUF255 K06888 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 325.0
DYD3_k127_2059430_2 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000008582 256.0
DYD3_k127_2059430_3 peroxiredoxin activity K00627,K01607 - 2.3.1.12,4.1.1.44 0.000000000000000000000000000000000000000000001149 167.0
DYD3_k127_207208_0 Protein of unknown function (DUF423) - - - 0.000000000000000000000000000000000000000000000002735 181.0
DYD3_k127_207208_1 Cna protein B-type domain - - - 0.0000000000000000000000000000000001191 153.0
DYD3_k127_207208_2 - - - - 0.00000000000000000000000000007709 128.0
DYD3_k127_207208_3 - - - - 0.00000000000000000001 99.0
DYD3_k127_2087438_0 Mo-molybdopterin cofactor biosynthetic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000228 316.0
DYD3_k127_2087438_1 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001634 264.0
DYD3_k127_2087438_2 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000332 251.0
DYD3_k127_2087438_3 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.000000000000000000000000001578 118.0
DYD3_k127_2087438_4 multidrug resistance efflux K03543 - - 0.00001096 58.0
DYD3_k127_2087644_0 Peptidase family M49 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 471.0
DYD3_k127_2087644_1 Glycogen debranching enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003342 460.0
DYD3_k127_2087644_2 PFAM Cytochrome b b6 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 403.0
DYD3_k127_2087644_3 Belongs to the peptidase M48B family K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007238 284.0
DYD3_k127_2087644_4 Rieske [2Fe-2S] domain K02636 - 1.10.9.1 0.00000000000000000000000000000000000000000000000000000108 200.0
DYD3_k127_2087644_5 Tetratricopeptide repeat - - - 0.000000000000000000000000003381 128.0
DYD3_k127_2087644_6 PBS lyase HEAT-like repeat - - - 0.0000000004276 73.0
DYD3_k127_2090652_0 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.000000000000000000000000000000000000000004059 165.0
DYD3_k127_2090652_1 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.0000000000000000000000000000001566 126.0
DYD3_k127_2090652_2 Methyltransferase K08316 - 2.1.1.171 0.000000000000000000000000001772 119.0
DYD3_k127_2090652_3 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.0000000000000000000006057 104.0
DYD3_k127_2090652_4 Aminotransferase K00812 - 2.6.1.1 0.0003659 50.0
DYD3_k127_2102699_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006270,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0034645,GO:0042623,GO:0043138,GO:0043140,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003656 508.0
DYD3_k127_2102699_1 Aldo Keto reductase K05882 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0017144,GO:0034641,GO:0042723,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:1901360,GO:1901564 1.1.1.91 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001825 377.0
DYD3_k127_2102699_2 response regulator - - - 0.000000000000000000000000000000000000000000000000000003637 204.0
DYD3_k127_2102699_3 PFAM ATP-binding region, ATPase domain protein K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000007914 177.0
DYD3_k127_2102699_4 PFAM response regulator receiver K02483,K07658,K07668 - - 0.00000000000000000000000000000000005262 141.0
DYD3_k127_2102699_5 Oxidoreductase NAD-binding domain K00528 - 1.18.1.2,1.19.1.1 0.0000000000000000001617 91.0
DYD3_k127_2102699_6 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07658 - - 0.00000000000000001815 92.0
DYD3_k127_2102699_7 Major Facilitator Superfamily - - - 0.000784 52.0
DYD3_k127_2118650_0 phosphorelay signal transduction system K02481,K07713,K07714 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 532.0
DYD3_k127_2118650_1 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009766 399.0
DYD3_k127_2118650_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009102 290.0
DYD3_k127_2118650_3 Peptidase family M54 K06974 - - 0.00000000000000000000000000000000000000008221 157.0
DYD3_k127_2118650_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000001591 71.0
DYD3_k127_2120216_0 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003639 444.0
DYD3_k127_2120216_1 Argininosuccinate lyase C-terminal K01755 - 4.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 392.0
DYD3_k127_2120216_2 acetylornithine aminotransferase K00821 - 2.6.1.11,2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003396 330.0
DYD3_k127_2120216_3 Regulates arginine biosynthesis genes K03402 - - 0.000000000000000000000007595 110.0
DYD3_k127_2120216_4 Phospholipase/Carboxylesterase - - - 0.00000000005181 76.0
DYD3_k127_2129252_0 TonB dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000009974 256.0
DYD3_k127_2129252_1 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000002191 243.0
DYD3_k127_2129252_2 peptidase activity, acting on L-amino acid peptides K01179 - 3.2.1.4 0.00000000003236 77.0
DYD3_k127_2132358_0 ERCC4 domain K10896 - - 0.00000000000005213 81.0
DYD3_k127_2142211_0 COGs COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 462.0
DYD3_k127_2142211_1 FIST_C - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005482 424.0
DYD3_k127_2142211_2 Peptidase family C25 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000958 298.0
DYD3_k127_2142211_3 Belongs to the MraZ family K03925 - - 0.000000000000000000002817 98.0
DYD3_k127_2142211_4 - - - - 0.000000000009049 75.0
DYD3_k127_2142211_5 Glycosyl hydrolase family 70 K01142,K01176 - 3.1.11.2,3.2.1.1 0.0000000002212 76.0
DYD3_k127_2144937_0 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009284 452.0
DYD3_k127_2144937_1 bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding K18997,K19057 - - 0.0000000000004594 71.0
DYD3_k127_2144937_2 Protein of unknown function, DUF481 K07283 - - 0.00000001094 68.0
DYD3_k127_2159227_0 DinB family - - - 0.0000000000000000007929 92.0
DYD3_k127_2159254_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004982 518.0
DYD3_k127_2172199_0 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006051 316.0
DYD3_k127_2172199_1 DinB family - - - 0.000000000000000000000000000000000000000003397 164.0
DYD3_k127_2172199_3 Transcriptional regulator - - - 0.0000000000009374 68.0
DYD3_k127_2185986_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1493.0
DYD3_k127_2185986_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004651 313.0
DYD3_k127_2185986_2 - - - - 0.0000000000000000009704 100.0
DYD3_k127_2185986_3 Outer membrane efflux protein K15725 - - 0.00001913 54.0
DYD3_k127_2197063_0 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000000000000000000000000000000111 215.0
DYD3_k127_2197063_1 Serine threonine protein kinase - - - 0.00000000000000000000000000000000000000000000000000000000006042 224.0
DYD3_k127_2197063_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K04750 - - 0.000000000000000000000000000000000000000000000000000000009254 209.0
DYD3_k127_2197063_3 Protein kinase domain - - - 0.0000000000000000000000000000000000000002074 168.0
DYD3_k127_2197063_5 - - - - 0.0000000000000002073 80.0
DYD3_k127_2235884_0 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000199 295.0
DYD3_k127_2235884_1 protein conserved in bacteria K09800 - - 0.00001368 55.0
DYD3_k127_2237079_0 long-chain fatty acid transport protein - - - 3.533e-226 749.0
DYD3_k127_2237079_1 - - - - 0.000000000000000000000000004843 124.0
DYD3_k127_2237079_3 Tetratricopeptide repeat - - - 0.0000000001926 72.0
DYD3_k127_2237079_4 Thrombospondin type 3 repeat - - - 0.0000001293 66.0
DYD3_k127_2268157_0 lipopolysaccharide transport protein B ATP-binding component of ABC superfamily K01990,K06861 GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015221,GO:0015399,GO:0015405,GO:0015437,GO:0015920,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0032991,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043190,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1901264,GO:1901505,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002461 334.0
DYD3_k127_2268157_1 N-6 DNA methylase K07317 - 2.1.1.72 0.000000000002171 74.0
DYD3_k127_2268157_2 Lipopolysaccharide-assembly, LptC-related - - - 0.0000008612 61.0
DYD3_k127_2269876_0 PFAM Zinc carboxypeptidase - - - 5.029e-272 865.0
DYD3_k127_2269876_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003189 509.0
DYD3_k127_2269876_2 HxlR-like helix-turn-helix - - - 0.000000000000000000000000000000000000000001016 163.0
DYD3_k127_2269876_3 DJ-1/PfpI family - - - 0.0000000000000000000000000000002178 138.0
DYD3_k127_2269876_4 DinB superfamily - - - 0.00000000000000000000001301 111.0
DYD3_k127_2283208_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004909 387.0
DYD3_k127_2283208_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004354 374.0
DYD3_k127_2283208_2 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 GO:0003674,GO:0003824,GO:0004518,GO:0004550,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006464,GO:0006468,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016787,GO:0016788,GO:0018995,GO:0019205,GO:0019538,GO:0019637,GO:0033643,GO:0033646,GO:0033647,GO:0033648,GO:0034641,GO:0036211,GO:0042025,GO:0043170,GO:0043412,GO:0043656,GO:0043657,GO:0044215,GO:0044216,GO:0044217,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0044464,GO:0046483,GO:0046777,GO:0046939,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072527,GO:0090304,GO:0090305,GO:1901360,GO:1901564 2.7.4.6 0.000000000000000000000000000001588 136.0
DYD3_k127_2295488_0 PFAM cytochrome c assembly protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003521 384.0
DYD3_k127_2295488_1 ResB-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 313.0
DYD3_k127_2295488_2 - - - - 0.00000000000000000000000000000000000000547 159.0
DYD3_k127_2295488_3 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.000000000000000000000000000654 133.0
DYD3_k127_2302163_0 GTPase activity K06207 GO:0000027,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006996,GO:0008150,GO:0009266,GO:0009408,GO:0009409,GO:0009628,GO:0009987,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0065003,GO:0070925,GO:0071826,GO:0071840 - 1.832e-256 814.0
DYD3_k127_2302163_1 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000006339 206.0
DYD3_k127_2302163_2 Pyridoxal-phosphate dependent enzyme K05396 - 4.4.1.15 0.0001371 52.0
DYD3_k127_2319409_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003383 471.0
DYD3_k127_2319409_1 Serine threonine protein kinase - - - 0.00000000000000000000000000000000000104 161.0
DYD3_k127_2319409_2 Tetratricopeptide repeat - - - 0.00004146 55.0
DYD3_k127_2319409_3 dolichyl monophosphate biosynthetic process K08591 - 2.3.1.15 0.00004313 48.0
DYD3_k127_2325670_0 Alpha-1,2-mannosidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001949 381.0
DYD3_k127_2325670_1 hydrolase family 92 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000881 300.0
DYD3_k127_2325670_2 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000002419 233.0
DYD3_k127_2325670_3 tRNA (Uracil-5-)-methyltransferase K03215,K15331 - 2.1.1.190,2.1.1.35 0.0000000000001241 71.0
DYD3_k127_2325670_4 Carrier of the growing fatty acid chain in fatty acid biosynthesis - - - 0.00000005823 60.0
DYD3_k127_2339407_0 Prokaryotic cytochrome b561 - - - 0.0 1183.0
DYD3_k127_2339407_1 NapC/NirT cytochrome c family, N-terminal region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003131 468.0
DYD3_k127_2339407_2 Cytochrome b subunit of formate dehydrogenase-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003961 429.0
DYD3_k127_2339407_3 Cytochrome c554 and c-prime K03620 - - 0.00000000000000000000000000000000000000000000000000000000005825 222.0
DYD3_k127_2339407_4 enzyme binding K00567,K07443 - 2.1.1.63 0.00000000000000000000000000000002357 130.0
DYD3_k127_2339407_5 transferase activity, transferring acyl groups K15520 - 2.3.1.189 0.0000000000000000000000000001231 123.0
DYD3_k127_2358171_0 COGs COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL CutL homologs K12528 - - 4.4e-276 872.0
DYD3_k127_2358171_1 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000362 473.0
DYD3_k127_2358171_2 Belongs to the peptidase M16 family - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004433 323.0
DYD3_k127_2358171_3 COGs COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL CutL homologs K12528 - - 0.00000000000000000000000000000000000000001889 158.0
DYD3_k127_2358171_4 Adenylate cyclase K01768 - 4.6.1.1 0.00000000000000000000000000000002661 135.0
DYD3_k127_2358171_5 Cytochrome C biogenesis protein transmembrane region K04084 - 1.8.1.8 0.00000000000000000000000000961 114.0
DYD3_k127_2358171_6 PPIC-type PPIASE domain K03769,K03770,K03771 - 5.2.1.8 0.00000000000007278 85.0
DYD3_k127_2358171_7 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.000000006295 66.0
DYD3_k127_2360795_0 PFAM sigma-54 factor interaction domain-containing protein K02481 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003104 386.0
DYD3_k127_2360795_1 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003992 286.0
DYD3_k127_2360795_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000176 168.0
DYD3_k127_2363812_0 lysine 2,3-aminomutase activity - - - 3.238e-222 703.0
DYD3_k127_2363812_1 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007025 587.0
DYD3_k127_2363812_2 MatE - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000427 518.0
DYD3_k127_2363812_3 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000001876 180.0
DYD3_k127_2388768_0 Belongs to the glutamate synthase family K00265 - 1.4.1.13,1.4.1.14 0.000000000000000000000000006592 130.0
DYD3_k127_2388768_1 4Fe-4S binding domain - - - 0.000000666 58.0
DYD3_k127_2397800_0 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000583 429.0
DYD3_k127_2397800_1 Polysaccharide biosynthesis protein - - - 0.0000008108 58.0
DYD3_k127_2397800_2 YceI-like domain - - - 0.000001791 50.0
DYD3_k127_241044_0 iron-sulfur cluster assembly K07033,K09014 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006790,GO:0008150,GO:0008152,GO:0009536,GO:0009842,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0031163,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044085,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0051186,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0071840 - 6.049e-210 667.0
DYD3_k127_241044_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008739 329.0
DYD3_k127_241044_2 Mycothiol maleylpyruvate isomerase N-terminal domain - - - 0.00000000000000000000000000000000000000000000000001548 186.0
DYD3_k127_241044_3 Transcriptional regulator - - - 0.000000000000000000005204 102.0
DYD3_k127_2437845_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00370,K07306,K17050 - 1.7.5.1,1.8.5.3 0.0 1367.0
DYD3_k127_2437845_1 nitrate reductase beta subunit K00371,K17051 - 1.7.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002428 535.0
DYD3_k127_2437845_2 chaperone-mediated protein complex assembly - - - 0.000000000000000000000009593 113.0
DYD3_k127_2437845_3 Domain of unknown function DUF302 - - - 0.000000000000009555 78.0
DYD3_k127_2437845_4 chaperone-mediated protein complex assembly - - - 0.0000000121 64.0
DYD3_k127_2462039_0 Glycosyl hydrolases family 15 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 572.0
DYD3_k127_2462039_1 two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003426 375.0
DYD3_k127_2462039_2 pyrroloquinoline quinone binding - - - 0.000000000000000000000000000000000000000000000000000000000000000005007 254.0
DYD3_k127_2462039_3 Evidence 4 Homologs of previously reported genes of - - - 0.00000000000000000000000000000000000000000000000000000618 201.0
DYD3_k127_2462039_4 PFAM ATP-binding region, ATPase domain protein K02668,K07708,K07709 - 2.7.13.3 0.000000000000000000000000000000000002139 159.0
DYD3_k127_248373_0 Glyoxal oxidase N-terminus - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002052 328.0
DYD3_k127_248373_1 beta' subunit K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003222 280.0
DYD3_k127_248373_2 acyl-CoA dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000203 268.0
DYD3_k127_248373_3 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.00000000000000000000000000000000000000000000000000003248 207.0
DYD3_k127_248373_4 Transmembrane and TPR repeat-containing protein - - - 0.0000000000000003545 87.0
DYD3_k127_248373_5 cellulose binding K00505 - 1.14.18.1 0.00000005507 66.0
DYD3_k127_2489161_0 PFAM Cytochrome b b6 domain - - - 1.071e-198 631.0
DYD3_k127_2489161_1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005082 352.0
DYD3_k127_2489161_2 PFAM Rieske 2Fe-2S domain K02636,K03886 - 1.10.9.1 0.000000000000000000000000001524 128.0
DYD3_k127_2489161_3 Cytochrome c - - - 0.000005806 53.0
DYD3_k127_2495162_0 IMS family HHH motif K02346 GO:0008150,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009650,GO:0050896 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000008401 262.0
DYD3_k127_2495162_1 Belongs to the thiolase family K00632 - 2.3.1.16 0.000000000000000000000000000006465 124.0
DYD3_k127_2495162_2 - - - - 0.00000000000000002792 85.0
DYD3_k127_2495162_3 Protein of unknown function DUF72 - - - 0.000000000000003714 80.0
DYD3_k127_2496173_0 slime layer polysaccharide biosynthetic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003705 428.0
DYD3_k127_2496173_1 Male sterility protein K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000392 225.0
DYD3_k127_2496173_2 Male sterility protein - - - 0.000000000000000000000000000001852 139.0
DYD3_k127_2496173_3 AMP-binding enzyme C-terminal domain K18687 - 6.2.1.41 0.0000006713 56.0
DYD3_k127_2497119_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006667 513.0
DYD3_k127_2497119_1 Belongs to the TrpF family K01817 - 5.3.1.24 0.0000000003788 63.0
DYD3_k127_2497544_0 AbgT putative transporter family K12942 - - 1.453e-210 670.0
DYD3_k127_2497544_1 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006377 538.0
DYD3_k127_2497544_10 cellulose binding - - - 0.000003006 60.0
DYD3_k127_2497544_11 Glyoxalase-like domain - - - 0.0001159 53.0
DYD3_k127_2497544_2 lycopene cyclase K06443 - 5.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 395.0
DYD3_k127_2497544_3 Dynamin family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000493 330.0
DYD3_k127_2497544_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002233 267.0
DYD3_k127_2497544_5 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000658 220.0
DYD3_k127_2497544_6 Iron/zinc purple acid phosphatase-like protein C - - - 0.000000000000000000000000000000000000000000000000000002635 213.0
DYD3_k127_2497544_7 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000513 186.0
DYD3_k127_2497544_8 Belongs to the FPP GGPP synthase family - - - 0.0000000000000000000000000000000000000000002559 179.0
DYD3_k127_2497544_9 MviN-like protein K03980 - - 0.0000000000000000000009507 111.0
DYD3_k127_2502802_0 - - - - 0.000000000000000000000000000000000000000000000000000009305 197.0
DYD3_k127_2502802_1 Protein tyrosine kinase - - - 0.000000000000000000000000000000000000000000002339 183.0
DYD3_k127_2502802_2 (FHA) domain - - - 0.00000000000002433 81.0
DYD3_k127_250916_0 lipopolysaccharide metabolic process K07502,K08309,K19804,K21572 - - 0.0000000000000000000006854 108.0
DYD3_k127_2528312_0 Angiotensin-converting enzyme K01283 - 3.4.15.1 1.123e-197 636.0
DYD3_k127_2538696_0 SAICAR synthetase K01923 - 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005312 350.0
DYD3_k127_2538696_1 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000006187 274.0
DYD3_k127_2538696_2 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.00000000000000000000000000000000000000000000000000000007785 203.0
DYD3_k127_2538696_3 Competence protein ComEC K02238 - - 0.00000000000000000000000000000000000000004693 169.0
DYD3_k127_2546525_0 FAD linked oxidase - - - 8.355e-196 621.0
DYD3_k127_2546525_1 Alginate lyase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000233 366.0
DYD3_k127_2546525_2 PFAM glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 359.0
DYD3_k127_2546525_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000006546 228.0
DYD3_k127_2546525_4 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000003595 198.0
DYD3_k127_2546525_5 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000001326 149.0
DYD3_k127_2546525_6 metallophosphoesterase - - - 0.00000000003437 77.0
DYD3_k127_2546525_7 Transcriptional regulatory protein, C terminal - - - 0.00000006569 55.0
DYD3_k127_2546525_8 dTDP biosynthetic process K00560,K00943 - 2.1.1.45,2.7.4.9 0.000001079 60.0
DYD3_k127_2546525_9 Parallel beta-helix repeats - - - 0.000008507 59.0
DYD3_k127_2547162_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004554 501.0
DYD3_k127_2547162_1 Surface antigen - - - 0.0000000000000003183 90.0
DYD3_k127_2551565_0 Tfp pilus assembly protein tip-associated adhesin K02674 - - 3.546e-204 653.0
DYD3_k127_2563628_0 Dehydrogenase E1 component K11381 - 1.2.4.4 2.762e-200 648.0
DYD3_k127_2563628_1 Formiminotransferase-cyclodeaminase K00603,K13990 - 2.1.2.5,4.3.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006497 392.0
DYD3_k127_2563628_2 Squalene phytoene synthase K00801 - 2.5.1.21 0.000000000000000000000000000000000000000000000000000000001476 222.0
DYD3_k127_2563628_3 hydrolase of the alpha beta superfamily K07018 - - 0.0000000000000000000000000000003914 131.0
DYD3_k127_2563628_4 - - - - 0.00000000000000000006126 104.0
DYD3_k127_2588033_0 Domain of unknown function (DUF362) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007995 563.0
DYD3_k127_2588033_1 Anti-sigma factor antagonist K04749,K06378 - - 0.000000000000000000000000000005222 132.0
DYD3_k127_2588033_2 Glycogen recognition site of AMP-activated protein kinase - - - 0.00000001734 63.0
DYD3_k127_2588033_3 von Willebrand factor (vWF) type A domain - - - 0.00001254 55.0
DYD3_k127_2598348_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 GO:0000166,GO:0003674,GO:0003824,GO:0004175,GO:0004176,GO:0004222,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0006950,GO:0006979,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0008270,GO:0009056,GO:0009057,GO:0010468,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019222,GO:0019538,GO:0030145,GO:0030163,GO:0030554,GO:0031224,GO:0031226,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0040007,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043273,GO:0044238,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0098796,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 1.812e-225 719.0
DYD3_k127_2598348_1 - - - - 6.666e-202 646.0
DYD3_k127_2598348_2 ATPase family associated with various cellular activities (AAA) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007859 269.0
DYD3_k127_2598348_3 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.0000000000000000000000000000000000000000000000000000000000329 213.0
DYD3_k127_2598348_4 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075,K15780 - 2.4.2.8,6.3.4.19 0.000000000000000000000000000000003985 141.0
DYD3_k127_2598348_5 Domain of unknown function (DUF1844) - - - 0.00000000003265 77.0
DYD3_k127_2622446_0 Serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002307 301.0
DYD3_k127_2628936_0 radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001065 279.0
DYD3_k127_2658639_0 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 0.00000000000000000000000000000000000000000000000000000003942 208.0
DYD3_k127_2658639_1 TatD related DNase K03424 GO:0003674,GO:0003824,GO:0004518,GO:0004536,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016020,GO:0016787,GO:0016788,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0071944,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901361,GO:1901575 - 0.00000000000000000000000000000000000000000000000001128 188.0
DYD3_k127_2673472_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 3.06e-322 995.0
DYD3_k127_2673472_1 PFAM alpha amylase, catalytic K06044 - 5.4.99.15 2.654e-283 899.0
DYD3_k127_2673472_2 Domain of unknown function (DUF3459) K00700,K01236 - 2.4.1.18,3.2.1.141 1.242e-228 724.0
DYD3_k127_2673472_3 Alpha amylase, catalytic domain K05343 - 3.2.1.1,5.4.99.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002619 373.0
DYD3_k127_2673472_4 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) K01214 - 3.2.1.68 0.00000000000000000000000000000000000000000000000000000000000000000000000000006787 262.0
DYD3_k127_2673472_5 4-alpha-glucanotransferase K00705 - 2.4.1.25 0.000000000000007587 83.0
DYD3_k127_2673472_6 single-stranded-DNA-specific exonuclease RecJ K07462 - - 0.00000000000004479 74.0
DYD3_k127_267737_0 Zn-dependent hydrolase, glyoxylase - GO:0003674,GO:0003824,GO:0004416,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006082,GO:0006090,GO:0006518,GO:0006575,GO:0006749,GO:0006750,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016787,GO:0016788,GO:0016790,GO:0019184,GO:0019752,GO:0031974,GO:0032787,GO:0034641,GO:0042398,GO:0043043,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0051186,GO:0051188,GO:0070013,GO:0071704,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001007 302.0
DYD3_k127_267737_1 Domain of unknown function (DUF1732) - - - 0.0000000000000000000000000000000000000000000000000017 205.0
DYD3_k127_267737_2 Putative porin - GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.0000000000000000174 96.0
DYD3_k127_267737_3 Fibronectin-binding protein - - - 0.0004501 51.0
DYD3_k127_2682664_0 Threonine synthase K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001336 271.0
DYD3_k127_2682664_1 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.0000000000000000000000000000000000000000000009075 173.0
DYD3_k127_2693017_0 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 GO:0000271,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005996,GO:0006082,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008690,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0019294,GO:0019752,GO:0033692,GO:0034637,GO:0034645,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0046394,GO:0046400,GO:0046401,GO:0046872,GO:0070567,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.7.38 0.0000000000000000000000000000000000000000000000000000003744 202.0
DYD3_k127_2693017_1 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.0000000000000000000000000000000000000007293 152.0
DYD3_k127_2693017_2 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.00000000000000000000000000000002608 133.0
DYD3_k127_2693017_3 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.00000000000000000000009116 101.0
DYD3_k127_2693017_4 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.00001116 54.0
DYD3_k127_2711826_0 capsule polysaccharide biosynthetic process K13687 GO:0008150,GO:0040007 - 0.00000000004201 71.0
DYD3_k127_2722401_0 Putative citrate transport - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004834 519.0
DYD3_k127_2722401_1 Voltage gated chloride channel K03281 - - 0.00000000000000000000000000000000000000000000000003752 193.0
DYD3_k127_2725358_0 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 - 2.4.2.18,4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 343.0
DYD3_k127_2725358_1 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657,K13503 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001347 330.0
DYD3_k127_2725358_2 TIGRFAM glutamine amidotransferase of anthranilate synthase K01658 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000006609 251.0
DYD3_k127_2730433_0 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.000000000000000000000000000000000000000004146 167.0
DYD3_k127_2730433_1 PFAM CBS domain containing protein K07168 - - 0.000000000000000000000000000002555 124.0
DYD3_k127_2730433_2 Rdx family K07401 - - 0.0000000006291 61.0
DYD3_k127_2732906_0 PFAM Amino acid - - - 2.7e-247 785.0
DYD3_k127_2732906_1 PFAM thioesterase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000002606 235.0
DYD3_k127_2732906_2 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.000000000000000000000001608 107.0
DYD3_k127_2743013_0 Domains REC, sigma54 interaction, HTH8 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 445.0
DYD3_k127_2743013_1 Lysylphosphatidylglycerol synthase TM region - - - 0.00000000000000000000000000000000000000000000000000000000000172 219.0
DYD3_k127_2743013_2 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000002309 228.0
DYD3_k127_2743013_3 DNA polymerase III (delta' subunit) K02340 - 2.7.7.7 0.0000000000000000005001 98.0
DYD3_k127_2743013_4 Evidence 5 No homology to any previously reported sequences K03643 GO:0001530,GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006810,GO:0006869,GO:0008150,GO:0008289,GO:0009279,GO:0009987,GO:0010876,GO:0015920,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031975,GO:0033036,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044462,GO:0044464,GO:0045229,GO:0051179,GO:0051234,GO:0061024,GO:0071702,GO:0071709,GO:0071840,GO:0071944,GO:0097367,GO:1901264 - 0.00000009015 61.0
DYD3_k127_279274_0 tRNA synthetases class I (E and Q), anti-codon binding domain K01886 - 6.1.1.18 5.581e-251 790.0
DYD3_k127_279274_1 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 346.0
DYD3_k127_279274_2 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K15546 - - 0.000000000000000000000000000000000000000000000000001257 193.0
DYD3_k127_2798571_0 Aminotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002746 332.0
DYD3_k127_2798571_1 BMC - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001553 257.0
DYD3_k127_2798571_2 domain protein - - - 0.000006201 51.0
DYD3_k127_2808404_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 7.538e-215 700.0
DYD3_k127_2808404_1 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002467 279.0
DYD3_k127_2808404_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000003081 199.0
DYD3_k127_2811837_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 1.207e-267 850.0
DYD3_k127_2811837_1 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002134 377.0
DYD3_k127_2811837_2 ABC-type Zn2 transport system, periplasmic component surface adhesin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002754 369.0
DYD3_k127_2811837_3 cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000008162 257.0
DYD3_k127_2811837_4 signal sequence binding K07152 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001167 265.0
DYD3_k127_2811837_5 TIGRFAM Caa(3)-type oxidase, subunit IV K02277 - 1.9.3.1 0.000000000000000008304 86.0
DYD3_k127_2811837_6 - - - - 0.00009716 53.0
DYD3_k127_2818733_0 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA K00639 - 2.3.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000456 517.0
DYD3_k127_2818733_1 belongs to the iron- containing alcohol dehydrogenase family K04072 - 1.1.1.1,1.2.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001922 332.0
DYD3_k127_2818733_2 tail collar domain protein K01406,K21449 - 3.4.24.40 0.0000000001942 68.0
DYD3_k127_2818733_3 Carrier of the growing fatty acid chain in fatty acid biosynthesis - - - 0.00006198 49.0
DYD3_k127_2821328_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 1.204e-307 954.0
DYD3_k127_2821328_1 PFAM Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008671 332.0
DYD3_k127_2821328_2 Ferredoxin - - - 0.0000000000000000000000000000000000000001206 154.0
DYD3_k127_2821328_3 Cysteine-rich secretory protein family - - - 0.000000000000000000000000000000000001745 151.0
DYD3_k127_2821328_4 HAD-hyrolase-like K01091 - 3.1.3.18 0.0000000000000001337 91.0
DYD3_k127_2821328_5 Polysaccharide biosynthesis protein - - - 0.000000001563 70.0
DYD3_k127_2821328_6 Smr domain - - - 0.00000000324 68.0
DYD3_k127_2831401_0 Belongs to the peptidase S8 family - - - 0.000000000000001252 92.0
DYD3_k127_2831401_1 PFAM FecR protein - - - 0.0000001608 65.0
DYD3_k127_2831401_2 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.000001791 50.0
DYD3_k127_2839545_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 2.124e-210 679.0
DYD3_k127_2839545_1 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.000000000000000000000000000000000219 138.0
DYD3_k127_2839545_2 Single-stranded-DNA-specific exonuclease recj K07462 - - 0.000000000005559 71.0
DYD3_k127_2855181_0 Deoxyhypusine synthase K00809 - 2.5.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 400.0
DYD3_k127_2855181_1 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000353 190.0
DYD3_k127_2855181_2 ATP hydrolysis coupled proton transport - - - 0.00003667 53.0
DYD3_k127_2859618_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007904 295.0
DYD3_k127_2859618_1 Transcriptional regulatory protein, C terminal K07657 - - 0.00000000000000000000000000000000000000000000000008187 181.0
DYD3_k127_2864210_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002667 460.0
DYD3_k127_2864210_1 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002475 372.0
DYD3_k127_2864210_2 Inositol monophosphatase K01092 GO:0003674,GO:0003824,GO:0005975,GO:0006020,GO:0006066,GO:0006793,GO:0006796,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008934,GO:0009056,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019637,GO:0019751,GO:0023052,GO:0042578,GO:0043647,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0046164,GO:0046174,GO:0046434,GO:0046838,GO:0046855,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0052745,GO:0052834,GO:0065007,GO:0071545,GO:0071704,GO:1901575,GO:1901615,GO:1901616 3.1.3.25 0.000000000000000000000000000000000000000000000000000001625 212.0
DYD3_k127_2864210_3 MotA TolQ ExbB proton channel K03562 - - 0.0000000000000000000000000000000001658 141.0
DYD3_k127_2864210_4 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998 - 0.0000000000000000000000000000000126 138.0
DYD3_k127_2864210_5 COG2143 Thioredoxin-related protein - - - 0.000000000000000000000000001609 121.0
DYD3_k127_2864210_6 PFAM Biopolymer transport protein ExbD TolR K03560 - - 0.0000000000000000000000199 109.0
DYD3_k127_2864210_7 TonB C terminal K03646 - - 0.000004625 57.0
DYD3_k127_2864210_8 protein conserved in bacteria K09804 - - 0.0002881 46.0
DYD3_k127_2891764_0 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001835 503.0
DYD3_k127_2891764_1 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005948 304.0
DYD3_k127_2891764_2 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000001442 239.0
DYD3_k127_2891764_3 Putative adhesin - - - 0.000000000000000000000000000000000000000000000008007 190.0
DYD3_k127_2891764_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000232 168.0
DYD3_k127_2891764_6 - - - - 0.00000000000000000006045 94.0
DYD3_k127_2891764_7 Putative esterase - - - 0.00000000000006965 80.0
DYD3_k127_2891764_8 - - - - 0.0000001173 63.0
DYD3_k127_2900239_0 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006701 339.0
DYD3_k127_2900239_1 Acyl transferase domain K00645 - 2.3.1.39 0.00000000000000000000000000000000000000000000000000000000000005714 224.0
DYD3_k127_2900239_2 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.000000000000003255 77.0
DYD3_k127_2900239_3 Uncharacterized ACR, COG1399 K07040 - - 0.0000000000008283 71.0
DYD3_k127_2907096_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007563 416.0
DYD3_k127_2907096_1 PFAM NHL repeat containing protein - - - 0.000000000000000000000000000000000005882 150.0
DYD3_k127_2907096_2 Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions - - - 0.000000000001442 79.0
DYD3_k127_290898_0 oxidoreductase activity K07114 - - 0.0000000000000000000000000000000000008877 148.0
DYD3_k127_290898_1 peptidyl-prolyl cis-trans isomerase activity K01802,K03769,K03770 - 5.2.1.8 0.00000000000000000000000002127 121.0
DYD3_k127_290898_2 - - - - 0.0000000000000000000001426 98.0
DYD3_k127_290898_3 - - - - 0.000000000004093 72.0
DYD3_k127_2909932_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 5e-324 1000.0
DYD3_k127_2909932_1 Major facilitator K06902 - - 0.0000000000000000000000000000000000000002522 172.0
DYD3_k127_2933279_0 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB K16147 - 2.4.99.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003759 375.0
DYD3_k127_2933279_1 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161,K11381,K21416 - 1.2.4.1,1.2.4.4 0.000000000000000000000000000000000000000000005618 182.0
DYD3_k127_2933279_2 aminopeptidase N - - - 0.00000000000000005888 91.0
DYD3_k127_293744_0 long-chain fatty acid transport protein - - - 0.0000000000477 76.0
DYD3_k127_293744_1 domain protein - - - 0.000000001071 73.0
DYD3_k127_2938960_0 STAS domain K03321 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001793 304.0
DYD3_k127_2938960_1 Surface antigen - - - 0.0000000000000000000000000000005594 136.0
DYD3_k127_2938960_2 Peptidase family M50 - - - 0.00000000000000000000003205 108.0
DYD3_k127_2948696_0 Na H antiporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000508 530.0
DYD3_k127_2948696_1 Protein of unknown function, DUF255 K06888 - - 0.0000000000000000000000000000000000003716 143.0
DYD3_k127_2948696_2 Putative esterase K07017 - - 0.000000000000000007273 96.0
DYD3_k127_2981511_0 Prolyl oligopeptidase family - - - 3.317e-310 965.0
DYD3_k127_2981511_1 PFAM YbaK prolyl-tRNA synthetase associated region K19055 - - 0.0000000000000000000000000000000000000000000000000000000000003624 215.0
DYD3_k127_2981511_2 Domain of unknown function (DUF4126) - - - 0.00000000000000000000000000000000000005888 147.0
DYD3_k127_2981511_3 Tetratricopeptide repeat - - - 0.00000001296 66.0
DYD3_k127_2982026_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 7.831e-274 863.0
DYD3_k127_2982026_1 Redoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001823 289.0
DYD3_k127_2982026_2 ERAP1-like C-terminal domain K01256,K01263 - 3.4.11.14,3.4.11.2 0.000000000000000000000000000000000000000000000001213 190.0
DYD3_k127_2982026_3 OsmC-like protein K06889,K07397 - - 0.000000000000000000000000000000008262 143.0
DYD3_k127_2996062_0 KduI/IolB family K03337 - 5.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003606 327.0
DYD3_k127_2996062_1 Thiamine pyrophosphate enzyme, central domain K03336 - 3.7.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001997 309.0
DYD3_k127_2996062_2 Oxidoreductase family, C-terminal alpha/beta domain K16044 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016616,GO:0036094,GO:0043167,GO:0043168,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0070401,GO:0070402,GO:0097159,GO:0102497,GO:1901265,GO:1901363 1.1.1.371 0.00000000000000000000000000000000000000000000000000000008614 200.0
DYD3_k127_3002029_0 Aldehyde dehydrogenase family K00128 - 1.2.1.3 2.775e-205 650.0
DYD3_k127_3002029_1 Arsenical pump membrane protein - - - 0.0000000000000000000003708 107.0
DYD3_k127_3029550_0 Catalyzes the specific phosphorylation of arginine residues in proteins K19405 - 2.7.14.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000002095 275.0
DYD3_k127_3029550_1 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03696 - - 0.000000000000000000000000000000000000000000000000000000000000000000004097 239.0
DYD3_k127_3041603_0 PFAM Nucleotidyl transferase K00971 - 2.7.7.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 307.0
DYD3_k127_3041603_1 binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000001582 123.0
DYD3_k127_3041603_2 Binds together with S18 to 16S ribosomal RNA K02990 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0015935,GO:0016020,GO:0019843,GO:0022626,GO:0022627,GO:0030312,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0071944,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000001012 99.0
DYD3_k127_3041603_3 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.00000000000000000000447 97.0
DYD3_k127_3048423_0 cysteine protease - - - 6.073e-216 688.0
DYD3_k127_3048423_1 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006584 347.0
DYD3_k127_3048423_2 Enoyl-CoA hydratase/isomerase K07537 - 4.2.1.100 0.000000000000000000000000000000000000000000000000000000000000001403 227.0
DYD3_k127_3048423_3 - - - - 0.00000000000000000000002631 111.0
DYD3_k127_3057255_0 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB K16147 - 2.4.99.16 3.343e-245 775.0
DYD3_k127_3057255_1 - - - - 0.0000000000003181 83.0
DYD3_k127_3057255_2 twitching motility protein K02669 - - 0.0001904 52.0
DYD3_k127_3113115_0 Uncharacterised protein family (UPF0182) K09118 - - 1.73e-229 737.0
DYD3_k127_3113115_1 (ABC) transporter K06147,K18890 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001863 574.0
DYD3_k127_3138315_0 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000388 406.0
DYD3_k127_3170772_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 572.0
DYD3_k127_3170772_1 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001303 385.0
DYD3_k127_3170772_2 Flavin containing amine oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006222 261.0
DYD3_k127_3170772_3 septum formation initiator K05589 - - 0.00001112 54.0
DYD3_k127_3179268_0 PKD domain K01179,K08651 - 3.2.1.4,3.4.21.66 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001817 449.0
DYD3_k127_3179268_1 Transglutaminase/protease-like homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005776 333.0
DYD3_k127_3179268_2 MOSC domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000302 273.0
DYD3_k127_3179268_3 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001036 273.0
DYD3_k127_3179268_4 Transglutaminase-like superfamily - - - 0.00000000000000000000000000000000000000000501 160.0
DYD3_k127_3179268_5 DinB superfamily K18912 - 1.14.99.50 0.00000000000000000000000000000000001354 141.0
DYD3_k127_3179268_6 cellulose binding K00505 - 1.14.18.1 0.0000000002741 74.0
DYD3_k127_3189149_0 gluconolactonase activity - - - 0.00000000000000000000000000000000000000000000002845 188.0
DYD3_k127_3189149_1 PFAM aminotransferase class V - - - 0.00000005813 64.0
DYD3_k127_3192661_0 PFAM asparagine synthase K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001893 623.0
DYD3_k127_3192661_1 Glycosyltransferase like family 2 K10012 - 2.4.2.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 387.0
DYD3_k127_3192661_2 Pfam Methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000579 203.0
DYD3_k127_3196731_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005652 295.0
DYD3_k127_3196731_1 smart pdz dhr glgf K04771,K04772 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.00000000000000222 81.0
DYD3_k127_3198907_0 Sodium/calcium exchanger protein K07300 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002361 348.0
DYD3_k127_3198907_1 denitrification pathway K03532 - - 0.000000000000000000000000000000000000000000000000000005845 203.0
DYD3_k127_3226318_0 Penicillin amidase K01434 - 3.5.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005218 473.0
DYD3_k127_3226318_1 cell division ATP-binding protein FtsE K09812 - - 0.0000000000000000000000000000000000000000000000000000000000000000001517 240.0
DYD3_k127_3226318_2 Histidine triad (Hit) protein K02503 - - 0.00000000000000000000000000000000000000000000000000001705 192.0
DYD3_k127_3226318_3 Belongs to the ABC-4 integral membrane protein family. FtsX subfamily K09811,K09812 GO:0000910,GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0006928,GO:0007049,GO:0007154,GO:0007165,GO:0007166,GO:0008150,GO:0008356,GO:0009274,GO:0009276,GO:0009605,GO:0009607,GO:0009615,GO:0009966,GO:0009987,GO:0010033,GO:0010646,GO:0016020,GO:0016021,GO:0016043,GO:0019221,GO:0022402,GO:0022603,GO:0022607,GO:0023051,GO:0023052,GO:0030312,GO:0030313,GO:0031224,GO:0031226,GO:0031975,GO:0032153,GO:0032506,GO:0034097,GO:0040007,GO:0040011,GO:0042173,GO:0042221,GO:0043207,GO:0043937,GO:0043938,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0045595,GO:0045597,GO:0045881,GO:0048518,GO:0048522,GO:0048583,GO:0048870,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051179,GO:0051301,GO:0051674,GO:0051704,GO:0051707,GO:0051716,GO:0065007,GO:0070098,GO:0070297,GO:0070887,GO:0071310,GO:0071345,GO:0071840,GO:0071944,GO:0071976,GO:0090529,GO:1902531 - 0.0000000000000000000000000000000000000001132 163.0
DYD3_k127_3226318_4 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog)) - GO:0008150,GO:0040007 - 0.0000000000002376 73.0
DYD3_k127_3228457_0 doubled CXXCH - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002362 510.0
DYD3_k127_3228457_1 PFAM GCN5-related N-acetyltransferase - - - 0.000000000000000000000000000000000000000000001487 169.0
DYD3_k127_3228457_2 Oxidoreductase family, C-terminal alpha/beta domain K00010 - 1.1.1.18,1.1.1.369 0.000000308 53.0
DYD3_k127_3230201_0 PFAM aromatic amino acid beta-eliminating lyase threonine aldolase K01667 - 4.1.99.1 5.048e-196 627.0
DYD3_k127_3230201_1 dihydrolipoamide dehydrogenase K00382 - 1.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 488.0
DYD3_k127_3230201_2 Protein of unknown function (DUF3501) - - - 0.0000000000000000000000000000000003983 133.0
DYD3_k127_3230201_3 Methyltransferase domain - - - 0.000000001753 71.0
DYD3_k127_3240734_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003532 537.0
DYD3_k127_3240734_1 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009618 428.0
DYD3_k127_3240734_2 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000004131 281.0
DYD3_k127_3240734_3 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009295,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000003819 225.0
DYD3_k127_3240734_4 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.000000000000000003052 91.0
DYD3_k127_3240734_5 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.000000000003251 68.0
DYD3_k127_3240734_6 Protein of unknown function (DUF721) - - - 0.00000000003863 76.0
DYD3_k127_3240734_7 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.000007733 55.0
DYD3_k127_3241763_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0000000000000000000000000000000000000000000000000000000000000000005998 233.0
DYD3_k127_3241763_1 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.000000000000000000000000000000000000000000002619 171.0
DYD3_k127_3241763_2 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.0000000000000000000000000000000000000000004066 162.0
DYD3_k127_3241763_3 - - - - 0.0004084 48.0
DYD3_k127_3245867_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008845 359.0
DYD3_k127_3245867_1 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000008468 176.0
DYD3_k127_3245867_2 Tetratricopeptide repeat - - - 0.00000001411 68.0
DYD3_k127_3246152_0 Histidine kinase K10681 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000006989 196.0
DYD3_k127_3246152_1 protein conserved in bacteria - - - 0.0000000000004662 79.0
DYD3_k127_3284384_0 elongation factor G K02355 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006790,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0030312,GO:0044237,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 588.0
DYD3_k127_3284384_1 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006886 402.0
DYD3_k127_3284384_2 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007162 287.0
DYD3_k127_3284384_3 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.00000000000000000000000000000000003556 139.0
DYD3_k127_3284384_4 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 GO:0000217,GO:0000400,GO:0000724,GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003824,GO:0004386,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007154,GO:0008150,GO:0008152,GO:0009314,GO:0009378,GO:0009379,GO:0009432,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0022607,GO:0031668,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0033554,GO:0034641,GO:0042802,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051259,GO:0051260,GO:0051262,GO:0051276,GO:0051289,GO:0051716,GO:0065003,GO:0071103,GO:0071496,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1902494 3.6.4.12 0.000000000000000000000000000000003607 138.0
DYD3_k127_3295767_0 GatB/GatE catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002623 462.0
DYD3_k127_3295767_1 PFAM response regulator receiver K07657 - - 0.000000000002997 80.0
DYD3_k127_3307163_0 MgtE intracellular N domain K06213 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009314 534.0
DYD3_k127_3307163_1 Amidinotransferase K01482 - 3.5.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000001027 256.0
DYD3_k127_3307163_2 MFS/sugar transport protein - - - 0.00000000000000000000000000000000001414 154.0
DYD3_k127_3310556_0 Glycosyl transferase 4-like domain K08256 - 2.4.1.345 0.0000000000000000000000000000000000000000000000000000000000001393 231.0
DYD3_k127_3310556_1 Bacterial lipid A biosynthesis acyltransferase K22311 GO:0003674,GO:0003824,GO:0005575,GO:0006629,GO:0006643,GO:0006664,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009247,GO:0009987,GO:0016020,GO:0016740,GO:0016746,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.3.1.265 0.00000000000000000002543 102.0
DYD3_k127_331119_0 UPF0365 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005002 446.0
DYD3_k127_331119_1 - K07403 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 342.0
DYD3_k127_3330631_0 extracellular matrix structural constituent - - - 0.000000000000002136 91.0
DYD3_k127_3330631_1 Involved in DNA repair and RecF pathway recombination K03584 - - 0.00000000004592 71.0
DYD3_k127_3345081_0 Polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006693 443.0
DYD3_k127_3345081_1 PFAM Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000318 395.0
DYD3_k127_3345081_2 UDP-4-amino-4-deoxy-L-arabinose aminotransferase K13308,K20429 GO:0005575,GO:0005576,GO:0006873,GO:0006875,GO:0006879,GO:0006950,GO:0007154,GO:0008150,GO:0009267,GO:0009605,GO:0009607,GO:0009987,GO:0009991,GO:0010106,GO:0019725,GO:0030003,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0042592,GO:0042594,GO:0043207,GO:0044403,GO:0044419,GO:0046916,GO:0048878,GO:0050801,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0071496,GO:0075136,GO:0098771 2.6.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006258 318.0
DYD3_k127_3345081_3 Cell wall formation K00075 - 1.3.1.98 0.000000000000000000000000000000000000000000000000000000000000000000107 242.0
DYD3_k127_3345081_4 PFAM Polysaccharide export protein - - - 0.00000000000000000000000009988 117.0
DYD3_k127_3345081_5 biosynthesis protein K08253 - 2.7.10.2 0.0000000000000000000001231 107.0
DYD3_k127_3345081_6 G-rich domain on putative tyrosine kinase K16554 - - 0.000000005711 69.0
DYD3_k127_3355955_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1193.0
DYD3_k127_3355955_1 COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter MnhA subunit K00341 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002083 606.0
DYD3_k127_3355955_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.000000000000000000000000000000000000000005752 170.0
DYD3_k127_3355955_11 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338,K05580 - 1.6.5.3 0.00000000000000000000000000000000000000001465 160.0
DYD3_k127_3355955_12 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00330 - 1.6.5.3 0.0000000000000000000000000000000006748 145.0
DYD3_k127_3355955_13 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.00000000000000000000000003709 121.0
DYD3_k127_3355955_14 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.00000000000000000002304 104.0
DYD3_k127_3355955_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0016020,GO:0044424,GO:0044464,GO:0071944 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002891 460.0
DYD3_k127_3355955_3 Proton-conducting membrane transporter K00342 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001806 453.0
DYD3_k127_3355955_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 GO:0003674,GO:0003824,GO:0003954,GO:0008137,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004017 404.0
DYD3_k127_3355955_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007204 402.0
DYD3_k127_3355955_6 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002699 288.0
DYD3_k127_3355955_7 Cytochrome C biogenesis protein transmembrane region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009947 264.0
DYD3_k127_3355955_8 Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000001273 244.0
DYD3_k127_3355955_9 DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.0000000000000000000000000000000000000000000000000002717 198.0
DYD3_k127_3357053_0 DEAD DEAH box helicase K03724 - - 0.0 1187.0
DYD3_k127_3357053_1 response regulator - - - 0.000000000000000002357 91.0
DYD3_k127_3367824_0 DOMON domain-containing protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005794,GO:0005802,GO:0012505,GO:0031410,GO:0031982,GO:0031984,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0097708,GO:0098791 - 0.0000000000000000000000000000005085 138.0
DYD3_k127_3367824_1 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.00000000000000000000000001779 120.0
DYD3_k127_3367824_2 Transcriptional regulatory protein, C terminal - - - 0.0000000000001147 75.0
DYD3_k127_3367824_3 PFAM TadE family protein - - - 0.000000003486 69.0
DYD3_k127_3379172_0 Trypsin K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004333 406.0
DYD3_k127_3379172_1 EVE domain - - - 0.00000000000000000000000000000000000000004893 161.0
DYD3_k127_3379172_2 - - - - 0.000005466 51.0
DYD3_k127_338479_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 5.352e-307 966.0
DYD3_k127_338479_1 PFAM ABC transporter related K06158 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007805 398.0
DYD3_k127_338479_2 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003916,GO:0003918,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006265,GO:0006351,GO:0006725,GO:0006807,GO:0006996,GO:0007059,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009295,GO:0009330,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032774,GO:0032991,GO:0034335,GO:0034641,GO:0034645,GO:0034654,GO:0035639,GO:0036094,GO:0042221,GO:0042493,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0097367,GO:0097659,GO:0140097,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576 5.99.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004243 355.0
DYD3_k127_338479_3 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 - - 0.000000000000000000000000000000000000000000000000003106 191.0
DYD3_k127_3401126_0 Angiotensin-converting enzyme K01283 - 3.4.15.1 6.593e-248 782.0
DYD3_k127_3401126_1 Di-haem oxidoreductase, putative peroxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000001881 241.0
DYD3_k127_3401126_2 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.0000000000000000000000000000000000000000000000000000000000005378 227.0
DYD3_k127_3401126_3 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.000000000000000000000000000002988 139.0
DYD3_k127_3401126_4 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02806 - - 0.0000000000000000000000001294 120.0
DYD3_k127_3401126_5 'Cold-shock' DNA-binding domain K03704 - - 0.0000000000000000000002716 100.0
DYD3_k127_3401126_6 C4-type zinc ribbon domain K07164,K22391 - 3.5.4.16 0.0008049 50.0
DYD3_k127_3401126_7 TPR repeat-containing protein - - - 0.0009137 51.0
DYD3_k127_3425111_0 PFAM Oxidoreductase molybdopterin binding domain K07147 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002305 361.0
DYD3_k127_3425111_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.000000000000000000000000000000000000000000000000007664 194.0
DYD3_k127_3429893_0 PFAM inositol monophosphatase K01092 - 3.1.3.25 0.0000000000000000000000000000000003307 141.0
DYD3_k127_3429893_1 cellulase activity - - - 0.0003713 50.0
DYD3_k127_3440631_0 PFAM NAD-dependent epimerase dehydratase K01784,K02473 - 5.1.3.2,5.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 366.0
DYD3_k127_3440631_1 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000009878 171.0
DYD3_k127_3440631_2 Peptidase family M28 - - - 0.00000000005589 75.0
DYD3_k127_3444020_0 Aminotransferase class-III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003476 357.0
DYD3_k127_3444020_1 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000982 257.0
DYD3_k127_3444020_2 PFAM AMP-dependent synthetase and ligase K00666 - - 0.00000000000000000000000000000000000000000000000000001034 206.0
DYD3_k127_3444020_3 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000005974 185.0
DYD3_k127_3444020_4 phosphatidate phosphatase activity K01096,K19302 - 3.1.3.27,3.1.3.4,3.1.3.81,3.6.1.27 0.00000000000000000000000000000000009132 141.0
DYD3_k127_3444020_5 Acyl-CoA reductase (LuxC) - - - 0.00000000001632 75.0
DYD3_k127_3455594_0 Copper type II ascorbate-dependent monooxygenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000002043 194.0
DYD3_k127_3455594_1 Lysylphosphatidylglycerol synthase TM region - - - 0.00000000000000728 87.0
DYD3_k127_3455594_2 Domain of unknown function (DUF4833) - - - 0.00003127 56.0
DYD3_k127_3469578_0 Bacterial extracellular solute-binding proteins, family 5 Middle K13893 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005295 312.0
DYD3_k127_3469578_1 guanyl-nucleotide exchange factor activity - - - 0.000000000000000000000000000000000000000000000000000000000000000002239 235.0
DYD3_k127_3469578_2 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000000000000000000000000000000000379 223.0
DYD3_k127_3470030_0 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000002389 206.0
DYD3_k127_3470030_1 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins - - - 0.000000000000000000000000000000000000000000000000004584 187.0
DYD3_k127_3470030_2 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.000000000000000000000000000000000004749 142.0
DYD3_k127_3470089_0 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 544.0
DYD3_k127_3470089_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 GO:0008150,GO:0040007 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006708 471.0
DYD3_k127_3478399_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1103.0
DYD3_k127_3478399_1 DNA-3-methyladenine glycosylase K01246 - 3.2.2.20 0.00000000000000000000000000000000000000000000000000000000000000000000111 255.0
DYD3_k127_3478399_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000001327 214.0
DYD3_k127_3478399_3 efflux transmembrane transporter activity - - - 0.0000000008905 65.0
DYD3_k127_3511749_0 Glycogen debranching enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000213 631.0
DYD3_k127_3511749_1 Belongs to the MIP aquaporin (TC 1.A.8) family K06188 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002986 312.0
DYD3_k127_3511749_2 Integrin alpha (beta-propellor repeats). - - - 0.00000000000000000000000000000000000000000005096 181.0
DYD3_k127_3511749_3 gluconolactonase K01053 - 3.1.1.17 0.0000000000000000000000000000000000000000003724 162.0
DYD3_k127_3538430_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002682 559.0
DYD3_k127_3538430_1 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000001873 191.0
DYD3_k127_3538430_2 Amidase - - - 0.00000000003726 68.0
DYD3_k127_3543809_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 5.87e-207 663.0
DYD3_k127_3543809_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0000000000000000000000000000000000000000000000000008684 209.0
DYD3_k127_3547683_0 TIGRFAM succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002054 473.0
DYD3_k127_3547683_1 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240,K00245 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006908 374.0
DYD3_k127_3547747_0 response regulator K13599 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008601 476.0
DYD3_k127_3547747_1 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.000000000000000000000000000000000000000000000000000000000000000001716 243.0
DYD3_k127_3547747_2 Histidine kinase K13598 - 2.7.13.3 0.0000000000000000000004365 113.0
DYD3_k127_3549876_0 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 - 1.5.5.1 6.344e-203 650.0
DYD3_k127_3549876_1 NUDIX domain K00077,K01092,K03574,K03795 - 1.1.1.169,3.1.3.25,3.6.1.55,4.99.1.3 0.000000000000000000000000000000000000000000000000001541 188.0
DYD3_k127_3549876_2 Belongs to the DNA glycosylase MPG family K03652 GO:0003674,GO:0003824,GO:0003905,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 3.2.2.21 0.00000000000000000000001279 107.0
DYD3_k127_3549876_3 Polysaccharide biosynthesis protein - - - 0.000000000000001374 89.0
DYD3_k127_3573938_0 Surface antigen K07277 GO:0005575,GO:0005623,GO:0008104,GO:0008150,GO:0009279,GO:0009987,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032991,GO:0033036,GO:0034613,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044425,GO:0044462,GO:0044464,GO:0045184,GO:0045229,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0061024,GO:0070727,GO:0071709,GO:0071840,GO:0071944,GO:0072657,GO:0090150,GO:0098552,GO:0098796,GO:1990063 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002104 414.0
DYD3_k127_3596939_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009053 569.0
DYD3_k127_3596939_1 succinyl-diaminopimelate desuccinylase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008746 516.0
DYD3_k127_3596939_10 Glycosyl transferase family 41 K09667 - 2.4.1.255 0.000000001451 72.0
DYD3_k127_3596939_11 - - - - 0.00001337 54.0
DYD3_k127_3596939_2 Cytochrome c554 and c-prime - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 518.0
DYD3_k127_3596939_3 peptidase activity, acting on L-amino acid peptides K07004,K09955 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002084 515.0
DYD3_k127_3596939_4 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003391 344.0
DYD3_k127_3596939_5 khg kdpg - - - 0.000000000000000000000000000000000000004409 154.0
DYD3_k127_3596939_6 Domain of unknown function (DUF368) K08974 - - 0.0000000000000000000000001638 119.0
DYD3_k127_3596939_8 glycosyl transferase group 1 - - - 0.00000000000000000000006442 104.0
DYD3_k127_3596939_9 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.00000000000000005485 96.0
DYD3_k127_3604678_0 4Fe-4S dicluster domain K00184 - - 9.4e-322 1016.0
DYD3_k127_3604678_1 Polysulphide reductase, NrfD K00185 - - 1.684e-205 648.0
DYD3_k127_3604678_2 Histidine-specific methyltransferase, SAM-dependent K18911 - 2.1.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001902 312.0
DYD3_k127_3604678_3 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000715 281.0
DYD3_k127_3604678_4 Protein of unknown function (DUF3341) - - - 0.0000000000000000000000000000000000000000000000000000000000001127 222.0
DYD3_k127_3604678_5 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000000000000000000000000002476 203.0
DYD3_k127_3604678_6 metal ion transmembrane transporter activity - - - 0.00000000000000000000000002858 122.0
DYD3_k127_3614339_0 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000002383 218.0
DYD3_k127_3614339_1 Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000001873 179.0
DYD3_k127_3614339_2 YbbR-like protein - - - 0.000000004479 66.0
DYD3_k127_3614339_3 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.000611 46.0
DYD3_k127_3620190_0 Transglycosylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002185 473.0
DYD3_k127_3636908_0 Protein kinase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008511 361.0
DYD3_k127_3636908_1 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000006412 177.0
DYD3_k127_3636908_2 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000006429 94.0
DYD3_k127_3651688_0 Evidence 5 No homology to any previously reported sequences - - - 0.0000000000000000001867 100.0
DYD3_k127_3672152_0 cell adhesion involved in biofilm formation - - - 0.00000000001275 77.0
DYD3_k127_3672152_1 cellulase activity K06882 - - 0.0001579 50.0
DYD3_k127_3680038_0 Peptidase dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001606 581.0
DYD3_k127_3680038_1 NAD NADP transhydrogenase alpha subunit K00324 - 1.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002551 430.0
DYD3_k127_3680038_2 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 - 1.6.1.2 0.000000000000000000000000004965 126.0
DYD3_k127_3680038_3 sequence-specific DNA binding K03719,K05800,K15782 GO:0000096,GO:0000098,GO:0000976,GO:0001067,GO:0001101,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006351,GO:0006355,GO:0006520,GO:0006522,GO:0006524,GO:0006534,GO:0006551,GO:0006725,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009059,GO:0009063,GO:0009069,GO:0009071,GO:0009078,GO:0009080,GO:0009081,GO:0009082,GO:0009093,GO:0009098,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010033,GO:0010243,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016053,GO:0016054,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019752,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031334,GO:0032774,GO:0032991,GO:0032993,GO:0034641,GO:0034645,GO:0034654,GO:0042221,GO:0042802,GO:0043170,GO:0043200,GO:0043201,GO:0043254,GO:0043436,GO:0043565,GO:0044087,GO:0044089,GO:0044212,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044271,GO:0044273,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0046394,GO:0046395,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607,GO:1901698,GO:1901700,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000144,GO:2001141 - 0.0000000000000000000000001401 111.0
DYD3_k127_3680038_4 cellulose binding - - - 0.0000000000002633 73.0
DYD3_k127_3680038_5 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.000003662 56.0
DYD3_k127_3685036_0 xanthine dehydrogenase activity K00087,K12528 - 1.17.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002333 362.0
DYD3_k127_3685036_1 Alanine-glyoxylate amino-transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 324.0
DYD3_k127_3685036_2 Spore coat protein CotH - - - 0.000006599 57.0
DYD3_k127_3702244_0 conserved repeat domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002368 349.0
DYD3_k127_3702244_1 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes - - - 0.00000000000000000000000000000000000000000000000000000000002881 236.0
DYD3_k127_3702244_2 Purple acid Phosphatase, N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000007952 220.0
DYD3_k127_3702244_3 Parallel beta-helix repeats - - - 0.00000001062 70.0
DYD3_k127_3710172_0 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989,K02428 - 2.7.7.56,3.6.1.66 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005223 280.0
DYD3_k127_3710172_1 Histidine kinase-like ATPases - - - 0.000000000000000000000000000000000000000000000000000000000000000003368 252.0
DYD3_k127_3710172_2 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.0000000000000000000000000000000000000000000000001465 189.0
DYD3_k127_3710172_3 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000004582 185.0
DYD3_k127_3710172_4 Ami_3 K01448 - 3.5.1.28 0.00000000000000000000000007767 115.0
DYD3_k127_3710172_5 Sporulation and spore germination - - - 0.000000000000000994 90.0
DYD3_k127_3710172_6 - - - - 0.0000001632 53.0
DYD3_k127_3710172_7 PFAM Redoxin domain protein - - - 0.0004181 48.0
DYD3_k127_371333_0 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 407.0
DYD3_k127_371333_1 Protein of unknown function (DUF1385) K09153 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000147 259.0
DYD3_k127_371333_2 UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity K00790 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008760,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016740,GO:0016765,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.5.1.7 0.0000000000000000000000000000000000000000000000000002887 189.0
DYD3_k127_371333_3 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0032259,GO:0036009,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 2.1.1.297 0.0000000000000000000000000000000000000000000000000006255 206.0
DYD3_k127_371333_4 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K02887,K03628 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576 - 0.00000000000000000000000000003067 119.0
DYD3_k127_371333_5 Binds the 23S rRNA K02909 - - 0.000000000000000000000000009049 111.0
DYD3_k127_371333_6 protein CHP03519, membrane, Bacteroidetes - - - 0.00000000000001382 75.0
DYD3_k127_3730669_0 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 413.0
DYD3_k127_3730669_1 Transglycosylase SLT domain K08307,K12204 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004003 350.0
DYD3_k127_3730669_2 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003057 307.0
DYD3_k127_3730669_3 ggdef domain - - - 0.0000000000000000000000000000000000006342 158.0
DYD3_k127_3730669_4 the current gene model (or a revised gene model) may contain a frame shift K02238 - - 0.00000000003012 76.0
DYD3_k127_3733055_0 Putative modulator of DNA gyrase K03568 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006759 400.0
DYD3_k127_3733055_1 domain, Protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002688 331.0
DYD3_k127_3733055_2 Zn-dependent proteases and their inactivated homologs K03592 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002563 317.0
DYD3_k127_3733055_3 Histidine kinase K13598 - 2.7.13.3 0.00000000000000000000000000000000003764 140.0
DYD3_k127_3733055_4 COG1309 Transcriptional regulator - - - 0.0000000000000000001554 97.0
DYD3_k127_373583_0 Rieske (2fe-2S) K00499 - 1.14.15.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001855 460.0
DYD3_k127_373583_1 ubiE/COQ5 methyltransferase family K00574,K07755 - 2.1.1.137,2.1.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000009333 271.0
DYD3_k127_373583_2 Las17-binding protein actin regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000492 263.0
DYD3_k127_373583_3 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000000001792 242.0
DYD3_k127_373583_4 glyoxalase III activity - - - 0.00000000000000000000000000000000000000000002857 172.0
DYD3_k127_373583_5 Thioredoxin domain - - - 0.00000000000000000000000000000000000000000006215 171.0
DYD3_k127_373583_6 peroxiredoxin activity - - - 0.0000000000000000000000000000181 134.0
DYD3_k127_373583_7 PQQ-like domain - - - 0.000000000000000000000003285 118.0
DYD3_k127_373583_8 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.0000000000000000001858 91.0
DYD3_k127_373583_9 TIGRFAM glutaredoxin-like domain protein - - - 0.0000000000000002225 80.0
DYD3_k127_3757222_0 metallocarboxypeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003557 469.0
DYD3_k127_3757222_1 AAA domain K07133 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 399.0
DYD3_k127_3757222_2 response regulator, receiver - - - 0.00000000000000000000000000000000000000000000000000000000000005209 226.0
DYD3_k127_3757222_3 COG0515 Serine threonine protein K12132 - 2.7.11.1 0.0002036 47.0
DYD3_k127_3769421_0 Trypsin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004368 376.0
DYD3_k127_3769421_1 SMART Elongator protein 3 MiaB NifB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001511 278.0
DYD3_k127_3809834_0 WD40 domain protein beta Propeller K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001555 321.0
DYD3_k127_3809834_1 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000001184 226.0
DYD3_k127_3809834_2 Alginate lyase - - - 0.000000000000000000000000000000000000000001054 181.0
DYD3_k127_3809834_3 Protein conserved in bacteria - - - 0.000000000000000000007296 109.0
DYD3_k127_3809834_4 - - - - 0.000000000003983 81.0
DYD3_k127_3809834_5 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes - - - 0.0001361 56.0
DYD3_k127_3834649_0 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 325.0
DYD3_k127_3834649_1 Threonine dehydratase K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000005971 181.0
DYD3_k127_3834649_2 Cna protein B-type domain - - - 0.000000000000000001108 102.0
DYD3_k127_3834649_3 Prokaryotic N-terminal methylation motif K02458,K02671 - - 0.000000003794 65.0
DYD3_k127_3834649_4 Belongs to the TPP enzyme family K07004 - - 0.0001993 55.0
DYD3_k127_3864700_0 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008446 490.0
DYD3_k127_3864700_1 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004391 374.0
DYD3_k127_3864700_2 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 344.0
DYD3_k127_3864700_3 TIGRFAM potassium uptake protein, TrkH family K03498 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007648 349.0
DYD3_k127_3864700_4 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003935 310.0
DYD3_k127_3864700_5 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002325 280.0
DYD3_k127_3864700_6 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000001994 249.0
DYD3_k127_3864700_7 PFAM TrkA-N domain K03499 - - 0.000000000000000000000000000000000000000000000003713 181.0
DYD3_k127_3864700_8 HEAT repeats - - - 0.000000000000000000000000000000000000000002042 176.0
DYD3_k127_3869804_0 Collagenase K08303 - - 0.0 1033.0
DYD3_k127_3869804_1 Acts as a magnesium transporter K06213 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003474 477.0
DYD3_k127_3869804_2 Two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002002 333.0
DYD3_k127_3869804_3 COG2133 Glucose sorbosone dehydrogenases K21430 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002839 303.0
DYD3_k127_3869804_4 signal transduction histidine kinase - - - 0.00000000000000000000000000000000000000001092 177.0
DYD3_k127_3869804_5 TIGRFAM cysteine desulfurase family protein - - - 0.000000000000000000000000000000001949 133.0
DYD3_k127_3869804_6 CHRD domain - - - 0.000000000001337 74.0
DYD3_k127_3869804_7 PFAM extracellular solute-binding protein, family 5 K02035 - - 0.000000002081 70.0
DYD3_k127_3869804_8 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000004828 69.0
DYD3_k127_3877350_0 OmpA family K03286 - - 0.000000000000000000000000000000000000000000842 170.0
DYD3_k127_3877350_1 Transport and Golgi organisation 2 - - - 0.000000000000000000000000000005278 133.0
DYD3_k127_3877350_2 - - - - 0.0000000000000000000251 105.0
DYD3_k127_3877350_3 positive regulation of macromolecule biosynthetic process K03973 - - 0.0000000000004942 73.0
DYD3_k127_3908696_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0019538,GO:0030312,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 1.286e-309 963.0
DYD3_k127_3908696_1 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.000000000000000000000000000000000000000000000000000000000001814 211.0
DYD3_k127_3908696_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000003617 212.0
DYD3_k127_3908696_3 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000005585 83.0
DYD3_k127_3954674_0 amino acid activation for nonribosomal peptide biosynthetic process K17713,K20952 - - 0.00000000000000000000000000000000000000000000000000000000001162 235.0
DYD3_k127_3954894_0 ATPase, AAA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002096 379.0
DYD3_k127_3954894_1 ABC-2 family transporter protein K09696 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002073 347.0
DYD3_k127_3954894_2 ABC transporter K01990,K09697 - 3.6.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007165 297.0
DYD3_k127_3954894_3 COG1853 Conserved protein domain typically associated with - - - 0.000000000000000000000000000000000000000000000000008141 187.0
DYD3_k127_3954894_4 FAD binding domain - - - 0.00006219 47.0
DYD3_k127_3963716_0 Belongs to the aldehyde dehydrogenase family K00294 - 1.2.1.88 1.515e-209 662.0
DYD3_k127_3963716_1 Belongs to the peptidase S8 family K14645 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 489.0
DYD3_k127_3963716_2 FimV N-terminal domain protein - - - 0.0000000000000000000000000000000000000000000495 175.0
DYD3_k127_3963716_3 PFAM thioesterase superfamily K10806 - - 0.000000000000005922 77.0
DYD3_k127_3965593_0 Trypsin K04771,K04772 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000283 332.0
DYD3_k127_3965593_1 Belongs to the peptidase S1C family K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.0000000000000000000000000747 125.0
DYD3_k127_3965593_2 GDSL-like Lipase/Acylhydrolase - - - 0.000000000000000000000001095 117.0
DYD3_k127_3979248_0 glutathione-regulated potassium exporter activity - - - 0.0000000000000000000000000000000000000000001736 162.0
DYD3_k127_3985021_0 4Fe-4S single cluster domain K06937 - - 1.059e-226 713.0
DYD3_k127_3985021_1 Polysaccharide deacetylase K22278 - 3.5.1.104 0.00000000000000000000000000000000000000006227 160.0
DYD3_k127_3985021_2 Alpha beta hydrolase - - - 0.000000000000000004243 94.0
DYD3_k127_3985021_3 O-linked GlcNAc transferase-putative TPR-containing transmembrane protein - - - 0.0000000000002924 81.0
DYD3_k127_3987243_0 Fructose-1-6-bisphosphatase, N-terminal domain K03841 - 3.1.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 427.0
DYD3_k127_3987243_1 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.00000000000000000000000000000000000000004468 171.0
DYD3_k127_3987243_2 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000856 105.0
DYD3_k127_3995791_0 zinc metalloprotease K11749 - - 0.000000000000000000000000000000000000000002754 169.0
DYD3_k127_3995791_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.000000000000000000000000000000002377 149.0
DYD3_k127_3995791_2 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.00004133 57.0
DYD3_k127_4005286_0 domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004381 273.0
DYD3_k127_4005286_1 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes - - - 0.000000000000000000000000000000000000000000000002287 199.0
DYD3_k127_4005286_2 Calx-beta domain - - - 0.0000000000000003968 94.0
DYD3_k127_4021576_0 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 GO:0001676,GO:0003674,GO:0003676,GO:0003677,GO:0003723,GO:0003729,GO:0003824,GO:0003989,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006417,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008270,GO:0008610,GO:0009058,GO:0009317,GO:0009329,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0016053,GO:0016421,GO:0016874,GO:0016885,GO:0017148,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032787,GO:0032991,GO:0034248,GO:0034249,GO:0042759,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:0097159,GO:1901363,GO:1901576,GO:1902494,GO:1990234,GO:2000112,GO:2000113 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002608 308.0
DYD3_k127_4021576_1 PFAM Mur ligase family, glutamate ligase domain K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000000000000001501 201.0
DYD3_k127_4021576_2 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.000000000000000000000000000003785 128.0
DYD3_k127_4021576_3 Glycoprotease family K14742 GO:0002949,GO:0005575,GO:0005618,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030312,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0071944,GO:0090304,GO:1901360 - 0.000004126 54.0
DYD3_k127_4031826_0 Prolyl oligopeptidase - - - 4.628e-203 653.0
DYD3_k127_4031826_1 LytTr DNA-binding domain K02477,K07705 - - 0.0000000000000000000000000000000000000002181 156.0
DYD3_k127_4041343_0 Belongs to the peptidase S16 family K01338,K04076,K04770 - 3.4.21.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005015 617.0
DYD3_k127_4041343_1 M42 glutamyl aminopeptidase - - - 0.00000000008467 70.0
DYD3_k127_4048792_0 DNA polymerase K02337 GO:0003674,GO:0003824,GO:0003887,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032991,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044776,GO:0046483,GO:0061695,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 2.016e-266 849.0
DYD3_k127_4048792_1 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000002311 251.0
DYD3_k127_4048792_2 Exopolysaccharide biosynthesis protein YbjH - - - 0.00000000000000000000000000004715 127.0
DYD3_k127_4049280_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003212 429.0
DYD3_k127_4049280_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000000000000000000000000000000000000000000000006521 195.0
DYD3_k127_4049280_2 - - - - 0.00000000000000000000000000003554 126.0
DYD3_k127_4049280_3 transcriptional regulator - - - 0.000000000000000000000000003815 125.0
DYD3_k127_4049280_4 RibD C-terminal domain - - - 0.00000000000000000001541 93.0
DYD3_k127_4049280_5 RING finger protein - - - 0.000008795 58.0
DYD3_k127_404936_0 ATP:ADP antiporter activity K03301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004944 347.0
DYD3_k127_404936_1 Protein tyrosine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000158 293.0
DYD3_k127_404936_2 GYD domain - - - 0.0000000008311 70.0
DYD3_k127_4051804_0 oligopeptide transporter - - - 1.627e-220 709.0
DYD3_k127_4051804_1 POT family K03305 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008387 582.0
DYD3_k127_4051804_10 Phospholipid methyltransferase - - - 0.00000000000000000002499 98.0
DYD3_k127_4051804_11 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000001084 87.0
DYD3_k127_4051804_2 Belongs to the ALAD family K01698 - 4.2.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 371.0
DYD3_k127_4051804_3 Protein of unknown function (DUF1684) K09164 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008445 293.0
DYD3_k127_4051804_4 DJ-1/PfpI family - - - 0.0000000000000000000000000000000000000000000000000000000000000000219 237.0
DYD3_k127_4051804_5 PFAM NADPH-dependent FMN reductase K19784 - - 0.000000000000000000000000000000000000000000000000000000000000002338 222.0
DYD3_k127_4051804_6 Endoribonuclease L-PSP - - - 0.000000000000000000000000000000000000000000000000000000006122 201.0
DYD3_k127_4051804_7 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000001224 156.0
DYD3_k127_4051804_8 DNA-templated transcription, initiation - - - 0.000000000000000000000000000000000005946 154.0
DYD3_k127_4051804_9 Protein of unknown function, DUF481 - - - 0.000000000000000000000000000005069 133.0
DYD3_k127_4065320_0 doubled CXXCH - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006164 289.0
DYD3_k127_4065320_1 DinB superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000003195 218.0
DYD3_k127_4065320_2 - - - - 0.000000000000000000000000000000000002824 140.0
DYD3_k127_4065320_3 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000002866 109.0
DYD3_k127_4070727_0 Tetratricopeptide repeat K08309 - - 0.000000000000000001033 96.0
DYD3_k127_4070727_1 amine dehydrogenase activity - - - 0.00000000006776 75.0
DYD3_k127_4070727_2 dolichyl monophosphate biosynthetic process - - - 0.000002722 59.0
DYD3_k127_4072051_0 - - - - 0.0000000000000000000000000000000000000000002539 169.0
DYD3_k127_4072051_1 PFAM RNA recognition motif - - - 0.00000000000000000000000004622 109.0
DYD3_k127_4072051_2 Aminotransferase - - - 0.00000000000000000000001017 113.0
DYD3_k127_4079470_0 Carbamoylphosphate synthase large subunit K01955 GO:0000050,GO:0003674,GO:0003824,GO:0004087,GO:0004088,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016884,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.5.5 0.0 1160.0
DYD3_k127_4079470_1 Belongs to the CarA family K01956 GO:0000050,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005951,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0019627,GO:0019752,GO:0032991,GO:0034641,GO:0040007,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003419 382.0
DYD3_k127_4123154_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 420.0
DYD3_k127_4124377_0 DeoC/LacD family aldolase K11645 - 4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 530.0
DYD3_k127_4124377_1 Threonine/Serine exporter, ThrE - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003644 381.0
DYD3_k127_4124377_2 Sigma-70, region 4 K03088 GO:0000988,GO:0000990,GO:0003674,GO:0005575,GO:0005618,GO:0005623,GO:0006355,GO:0006950,GO:0006979,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0016987,GO:0019219,GO:0019222,GO:0030312,GO:0031323,GO:0031326,GO:0033554,GO:0034605,GO:0043254,GO:0044087,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051252,GO:0051409,GO:0051716,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2000142,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000001068 222.0
DYD3_k127_4124377_3 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000003358 170.0
DYD3_k127_4124377_4 COG0346 Lactoylglutathione lyase and related lyases - - - 0.000000000000000000000000000003892 125.0
DYD3_k127_4124377_5 Protein of unknown function (DUF1232) - - - 0.000000000001728 80.0
DYD3_k127_4136640_0 PFAM Asparagine synthase K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 577.0
DYD3_k127_4136640_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00066 - 1.1.1.132 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007674 502.0
DYD3_k127_4136640_2 Cysteine desulfurase - - - 0.000000000000000000000000000000000000000000000000000000000004584 214.0
DYD3_k127_4136640_3 Archaea-specific editing domain of threonyl-tRNA synthetase - - - 0.000000000000000000000000000000000006402 142.0
DYD3_k127_4136640_4 Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding - - - 0.00000000002823 68.0
DYD3_k127_4137481_0 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000003261 212.0
DYD3_k127_4137536_0 Protein kinase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001128 402.0
DYD3_k127_4137536_1 Threonine dehydratase K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001912 345.0
DYD3_k127_4137536_2 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000000000000000000000000000000000000000000000000000000000001597 249.0
DYD3_k127_4137536_3 Carbon-nitrogen hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000003847 229.0
DYD3_k127_4137536_4 phosphatidate phosphatase activity K19302 GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009605,GO:0009607,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019637,GO:0042578,GO:0043207,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0046467,GO:0046493,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0051832,GO:0051834,GO:0052173,GO:0052200,GO:0071704,GO:0075136,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 3.6.1.27 0.0000000000000000009599 99.0
DYD3_k127_4137536_5 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.0000001143 64.0
DYD3_k127_4137536_6 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00005595 55.0
DYD3_k127_4137536_7 Alpha beta hydrolase fold K03928 - 3.1.1.1 0.0003863 53.0
DYD3_k127_4146564_0 SMART alpha amylase, catalytic sub domain K01187,K05343 - 3.2.1.1,3.2.1.20,5.4.99.16 0.0 1015.0
DYD3_k127_4146564_1 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001763 391.0
DYD3_k127_4146564_2 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006821 334.0
DYD3_k127_4146564_3 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 304.0
DYD3_k127_4146564_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K15727 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006084 283.0
DYD3_k127_4146564_5 efflux transmembrane transporter activity K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003483 273.0
DYD3_k127_4146564_6 Methylates ribosomal protein L11 K02687 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006480,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016278,GO:0016279,GO:0016740,GO:0016741,GO:0018011,GO:0018012,GO:0018022,GO:0018023,GO:0018193,GO:0018194,GO:0018205,GO:0019538,GO:0031365,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 - 0.000000000000000000000000000000000000000000000000000000000000000000001436 251.0
DYD3_k127_4146564_7 cellulose binding - - - 0.00008096 56.0
DYD3_k127_4158695_0 MreB/Mbl protein K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009967 458.0
DYD3_k127_4158695_1 Penicillin-binding Protein dimerisation domain K05515 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 369.0
DYD3_k127_4158695_2 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002094 286.0
DYD3_k127_4158695_3 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000000000000000000000001901 203.0
DYD3_k127_4158695_4 Belongs to the UPF0758 family K03630 - - 0.00000000000000000000000000000000000000000000007259 182.0
DYD3_k127_4158695_5 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 - 2.7.1.39 0.0000000000000000000000000000000000000000000004281 183.0
DYD3_k127_4158695_6 PFAM Rod shape-determining protein MreC K03570 - - 0.0000000000000000006313 98.0
DYD3_k127_4158695_7 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.000000000000000121 88.0
DYD3_k127_4158695_8 rod shape-determining protein MreD K03571 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0008360,GO:0016020,GO:0016021,GO:0022603,GO:0022604,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071944 - 0.000000000973 67.0
DYD3_k127_4174309_0 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 GO:0000271,GO:0003674,GO:0003824,GO:0004373,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0008194,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0035251,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046527,GO:0055114,GO:0071704,GO:1901576 2.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004792 411.0
DYD3_k127_4174309_1 galactose-1-phosphate uridylyltransferase K00965 - 2.7.7.12 0.00000007531 53.0
DYD3_k127_4188520_0 Zinc metalloprotease (Elastase) - - - 0.0000000000000000000003707 113.0
DYD3_k127_4188520_1 PFAM von Willebrand factor type A K01337 - 3.4.21.50 0.000000000000005811 90.0
DYD3_k127_4188520_2 S53, subtilisin kexin sedolisin - - - 0.0000000002732 74.0
DYD3_k127_4191177_0 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.000000000000000000000000000000000000000000000000000000000003476 219.0
DYD3_k127_4191177_1 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000002582 114.0
DYD3_k127_4191177_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000002847 69.0
DYD3_k127_4200343_0 Parallel beta-helix repeats - - - 0.00000000000000000000000000000000003368 150.0
DYD3_k127_4200343_1 dienelactone hydrolase - - - 0.0002498 53.0
DYD3_k127_4210533_0 ABC-type uncharacterized transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003607 398.0
DYD3_k127_4210533_1 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000001289 170.0
DYD3_k127_4210533_2 TIGRFAM DJ-1 family protein K03152 - 3.5.1.124 0.0000000000000000000000000000000000389 141.0
DYD3_k127_4210533_3 Domain of unknown function (DUF4340) - - - 0.0001412 54.0
DYD3_k127_4212693_0 Membrane - - - 0.0000000000000000000000002125 121.0
DYD3_k127_4212693_1 DNA-directed DNA polymerase K02337 - 2.7.7.7 0.00000000008068 69.0
DYD3_k127_4231635_0 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003787 334.0
DYD3_k127_4231635_1 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002737 278.0
DYD3_k127_4231635_2 Transcriptional regulator, TraR DksA family K06204 - - 0.00000000000000000000001238 105.0
DYD3_k127_4231635_3 STAS domain K04749 - - 0.0000000000003197 75.0
DYD3_k127_4255307_0 Peptidase, M16 K07263 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 5.105e-261 835.0
DYD3_k127_4255307_1 von Willebrand factor (vWF) type A domain K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002362 315.0
DYD3_k127_4255307_2 Tetratricopeptide repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001927 300.0
DYD3_k127_4255307_3 Surface antigen - - - 0.000000000000000000000000000000000000000000000000000000000000000001529 249.0
DYD3_k127_4255307_4 PFAM iron dependent repressor K03709 - - 0.0000000000000000000000000000000000000000000000000000001017 202.0
DYD3_k127_4255307_5 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.00000000000000000000000000000000000000000001813 166.0
DYD3_k127_4255307_6 von Willebrand factor (vWF) type A domain K07114,K12511 - - 0.00000000000002333 76.0
DYD3_k127_4280268_0 Pyridoxal-phosphate dependent enzyme K01738,K01912 - 2.5.1.47,6.2.1.30 7.265e-197 625.0
DYD3_k127_4280268_1 Deoxyribodipyrimidine photo-lyase K01669 - 4.1.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005755 552.0
DYD3_k127_4280268_10 GDSL-like Lipase/Acylhydrolase - - - 0.00001559 57.0
DYD3_k127_4280268_2 AlkA N-terminal domain K13529,K13530 - 3.2.2.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 501.0
DYD3_k127_4280268_3 Belongs to the FPG family K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000089 391.0
DYD3_k127_4280268_4 Protein of unknown function (DUF1722) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007457 370.0
DYD3_k127_4280268_5 Domain of unknown function (DUF1731) K07071 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006251 312.0
DYD3_k127_4280268_6 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001125 274.0
DYD3_k127_4280268_8 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000000000000000000000000001083 132.0
DYD3_k127_4280268_9 Tetratricopeptide repeat - - - 0.0000000000893 72.0
DYD3_k127_4297216_0 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005439 509.0
DYD3_k127_4297216_1 PFAM Calcium calmodulin dependent protein kinase II Association - - - 0.000000000000000202 83.0
DYD3_k127_4297216_2 hydrolase of the alpha beta-hydrolase fold K07020 - - 0.000000000000007306 78.0
DYD3_k127_4297216_3 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.00000000003904 68.0
DYD3_k127_4311896_0 Mitochondrial biogenesis AIM24 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 383.0
DYD3_k127_4311896_1 Peptidyl-prolyl cis-trans isomerase K01802,K03767,K03772 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000002436 271.0
DYD3_k127_4311896_2 PFAM Rhomboid family K19225 - 3.4.21.105 0.000000000000000000000000000000000000000000000000001117 201.0
DYD3_k127_4311896_3 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.0000000000000000000000002923 111.0
DYD3_k127_4311896_4 Putative regulatory protein - - - 0.000000000000000001135 94.0
DYD3_k127_4311896_5 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.00000005622 55.0
DYD3_k127_4317243_0 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007191 371.0
DYD3_k127_4317243_1 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000004276 160.0
DYD3_k127_4317243_2 Belongs to the CDS family K00981 - 2.7.7.41 0.0000000000000000000000000000000000000003843 162.0
DYD3_k127_4332282_0 cation efflux K16264 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005861 271.0
DYD3_k127_4332282_1 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.000000000000000000000000000000000000000000000000000000000005875 215.0
DYD3_k127_4332282_2 e3 binding domain K00658 - 2.3.1.61 0.000000000000000000000000000000000000000000000000000000000009735 211.0
DYD3_k127_4332282_3 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.00000000000000002823 90.0
DYD3_k127_4333156_0 PBP superfamily domain K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004454 417.0
DYD3_k127_4333156_1 Histidine kinase K07636 - 2.7.13.3 0.00000000000000000000000000000000000004813 147.0
DYD3_k127_4350356_0 Phytoene dehydrogenase K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 8.195e-238 743.0
DYD3_k127_4350356_1 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005123 287.0
DYD3_k127_4350356_2 PFAM Squalene phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.000000000000000000000000000000000000000000000000000000000000000000000000005811 275.0
DYD3_k127_4350356_3 FAD dependent oxidoreductase K09879 - - 0.000000000000000000000000846 112.0
DYD3_k127_4350356_4 Uncharacterized protein conserved in bacteria (DUF2141) - - - 0.00000000000000002695 93.0
DYD3_k127_4355481_0 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 342.0
DYD3_k127_4355481_1 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008987,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016053,GO:0017144,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0019805,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046496,GO:0046874,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.5.1.72 0.0000000000000000000000000000000000000000000000146 181.0
DYD3_k127_4355481_2 Belongs to the HesB IscA family K13628 - - 0.00000000000000000003474 104.0
DYD3_k127_4362837_0 PFAM peptidase M13 K01415 - 3.4.24.71 2.447e-198 632.0
DYD3_k127_4364920_0 Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA K01638 GO:0003674,GO:0003824,GO:0004474,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006081,GO:0006082,GO:0006097,GO:0008150,GO:0008152,GO:0009987,GO:0016740,GO:0016746,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044424,GO:0044464,GO:0046487,GO:0046912,GO:0071704 2.3.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004085 349.0
DYD3_k127_4364920_1 Catalyzes a key regulatory step in fatty acid biosynthesis K00208 - 1.3.1.10,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001659 296.0
DYD3_k127_4364920_2 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.000000000000000000001314 100.0
DYD3_k127_4364920_3 Endonuclease I K07004 - - 0.00000000000000000232 88.0
DYD3_k127_4384249_0 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate K07106 - 4.2.1.126 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008154 285.0
DYD3_k127_4384249_1 Peptidase family C25 - - - 0.00000006433 64.0
DYD3_k127_4384802_0 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001609 399.0
DYD3_k127_4384802_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.0000000000000000000000000000000000000000000007308 176.0
DYD3_k127_4411475_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 3.497e-239 756.0
DYD3_k127_4411475_1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K01840,K03431,K15778 - 5.4.2.10,5.4.2.2,5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004769 398.0
DYD3_k127_4411475_2 Diguanylate cyclase, GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002667 260.0
DYD3_k127_4411475_3 endoribonuclease L-PSP K09022 - 3.5.99.10 0.0000000000000000000000000000000000000174 149.0
DYD3_k127_4411475_4 - - - - 0.000004799 59.0
DYD3_k127_4414866_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000001697 225.0
DYD3_k127_4414866_1 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000006021 214.0
DYD3_k127_4414866_2 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000008545 210.0
DYD3_k127_4414866_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.000000000000000000000000000001005 130.0
DYD3_k127_4414866_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0030964,GO:0032991,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0098796,GO:1901135,GO:1901360,GO:1901564,GO:1902494 1.6.5.3 0.00000000000000000000000000001635 121.0
DYD3_k127_4420868_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 399.0
DYD3_k127_4420868_1 Microcompartments protein - - - 0.0000000000000000000000000000000000000001151 159.0
DYD3_k127_4420868_2 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K05788 - - 0.000000000000000000000000008541 113.0
DYD3_k127_4420868_3 ethanolamine utilization protein EutN carboxysome structural protein Ccml K04028 GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0033554,GO:0050896,GO:0051716 - 0.000000000000007257 78.0
DYD3_k127_4420868_4 Aldehyde dehydrogenase family K04021,K13922 GO:0003674,GO:0003824,GO:0004029,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114 1.2.1.87 0.00000000000003324 72.0
DYD3_k127_4420868_5 Ethanolamine utilisation protein EutN/carboxysome K04028 - - 0.00000000005829 66.0
DYD3_k127_4425670_0 Phenazine biosynthesis PhzC PhzF protein K06998 - 5.3.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000001812 278.0
DYD3_k127_4425670_1 PFAM glycoside hydrolase, family 9 K01179 - 3.2.1.4 0.00000000002199 75.0
DYD3_k127_4425670_2 PEP-CTERM motif - - - 0.00003747 55.0
DYD3_k127_4432001_0 Type II/IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007564 390.0
DYD3_k127_4432001_1 acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.000000000000000000000000000000000000000000008337 182.0
DYD3_k127_4432001_2 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.000000000000000000000000000000000000000001567 160.0
DYD3_k127_4432001_3 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.000000000000000000000000000000000007515 142.0
DYD3_k127_4432001_4 Tetratricopeptide repeat - - - 0.000001209 58.0
DYD3_k127_4451214_0 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000000003036 85.0
DYD3_k127_4466390_0 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 - 4.1.1.32 4.642e-247 777.0
DYD3_k127_4466390_1 Ankyrin repeats (3 copies) - - - 0.00000000000000008277 89.0
DYD3_k127_4509098_0 Malate synthase K01638 - 2.3.3.9 5.705e-286 891.0
DYD3_k127_4509098_1 Isocitrate lyase K01637 GO:0003674,GO:0003824,GO:0004451,GO:0005975,GO:0006081,GO:0006082,GO:0006097,GO:0006102,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016830,GO:0016833,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0046421,GO:0046487,GO:0071704,GO:0072350 4.1.3.1 4.368e-276 861.0
DYD3_k127_4509098_2 DinB superfamily - - - 0.000000000000000000000000000000000000000000301 165.0
DYD3_k127_4509098_3 protocatechuate 3,4-dioxygenase activity K00449 - 1.13.11.3 0.000000000009171 71.0
DYD3_k127_4509098_4 6-phosphogluconate dehydrogenase K00042 - 1.1.1.60 0.0000005461 53.0
DYD3_k127_4512225_0 Evidence 5 No homology to any previously reported sequences - - - 0.00000000000000000002275 105.0
DYD3_k127_4512225_1 heme binding - - - 0.0000002745 64.0
DYD3_k127_4512252_0 extracellular matrix structural constituent - - - 0.000000000000000000549 89.0
DYD3_k127_4512252_1 Evidence 5 No homology to any previously reported sequences - - - 0.000001513 62.0
DYD3_k127_4515621_0 Belongs to the ompA family K03286 - - 0.00000000000000000091 97.0
DYD3_k127_4515621_1 PFAM Methyltransferase type 11 - - - 0.000000000000000002134 95.0
DYD3_k127_4523186_0 Arginyl tRNA synthetase N terminal dom K01887 - 6.1.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004447 489.0
DYD3_k127_4523186_1 PFAM PfkB domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005594 334.0
DYD3_k127_4523186_2 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000000000002806 135.0
DYD3_k127_4523186_3 Heptaprenyl diphosphate synthase component I K00805 - 2.5.1.30 0.000000001101 64.0
DYD3_k127_4523186_4 - - - - 0.000002383 59.0
DYD3_k127_4545968_0 FKBP-type peptidyl-prolyl cis-trans isomerase K01802,K03772 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003056 294.0
DYD3_k127_4545968_1 Domain of unknown function (DUF4136) - - - 0.0000000000000000000000000000002016 133.0
DYD3_k127_4545968_2 Histidine kinase - - - 0.000000000000000000000000004915 115.0
DYD3_k127_4545968_3 - - - - 0.00000000000000000000000003147 113.0
DYD3_k127_4545968_4 cheY-homologous receiver domain - - - 0.0000000000000000000000009925 115.0
DYD3_k127_4545968_5 - - - - 0.0000000000000003308 89.0
DYD3_k127_4545968_6 Domain of unknown function (DUF4136) - - - 0.0000000007917 63.0
DYD3_k127_4545968_7 Domain of unknown function (DUF4136) - - - 0.0000001559 62.0
DYD3_k127_4554098_0 WD40-like Beta Propeller Repeat K03641,K07277 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004701 514.0
DYD3_k127_4554098_1 Virulence factor BrkB K07058 - - 0.000000000000000000000000000000000000009934 155.0
DYD3_k127_4554098_2 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.0000000000000000000000001064 111.0
DYD3_k127_4554098_3 belongs to the aldehyde dehydrogenase family K00138 - - 0.000000000000000002805 84.0
DYD3_k127_4554098_4 TatD related DNase K03424 - - 0.00000000001533 72.0
DYD3_k127_4561429_0 Asparaginyl-tRNA synthetase K01893 GO:0003674,GO:0003824,GO:0004812,GO:0004816,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006421,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002195 566.0
DYD3_k127_4561429_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007282 347.0
DYD3_k127_4579234_0 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002974 392.0
DYD3_k127_4579234_1 PFAM adenosine AMP deaminase K01488 - 3.5.4.4 0.0000000000000000002591 97.0
DYD3_k127_4579234_2 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0019509,GO:0019752,GO:0043094,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046523,GO:0071265,GO:0071267,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.23 0.00000000001332 75.0
DYD3_k127_4579234_3 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.000000008468 60.0
DYD3_k127_4593700_0 Domain of unknown function DUF11 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001953 266.0
DYD3_k127_4606933_0 L-asparaginase K01424 - 3.5.1.1 1.756e-201 636.0
DYD3_k127_4606933_1 COG2906 Bacterioferritin-associated ferredoxin K02192 - - 0.00001554 50.0
DYD3_k127_4617890_0 OPT oligopeptide transporter protein - - - 4.786e-305 952.0
DYD3_k127_4617890_1 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784,K12448 - 5.1.3.2,5.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006369 417.0
DYD3_k127_4617890_2 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008469 284.0
DYD3_k127_4617890_3 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily K17828 - 1.3.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000001366 261.0
DYD3_k127_4617890_4 inorganic diphosphatase activity K01507 - 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000341 205.0
DYD3_k127_4617890_5 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 GO:0003674,GO:0003824,GO:0004590,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.00000000000000000000000000000000000000000000000002484 203.0
DYD3_k127_4617890_6 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.000000000000000000000000000000000000000000005835 186.0
DYD3_k127_4617890_7 Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( ) K02823 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0016645,GO:0016646,GO:0042602,GO:0052875,GO:0055114 - 0.000000000000000000000000000000000002141 149.0
DYD3_k127_4617890_8 Tetratricopeptide repeat - - - 0.00000009804 65.0
DYD3_k127_4617890_9 Zn peptidase - - - 0.0000009123 60.0
DYD3_k127_4621601_0 Belongs to the anaerobic coproporphyrinogen-III oxidase family - GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0051989,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005568 462.0
DYD3_k127_4621601_1 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003687 417.0
DYD3_k127_4621601_2 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007623 342.0
DYD3_k127_4621601_3 spermidine synthase activity K00797 GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008216,GO:0008295,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0034641,GO:0042401,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576 2.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005296 315.0
DYD3_k127_4621601_4 TAP-like protein - - - 0.000000000000000000000000004303 117.0
DYD3_k127_4641930_0 threonine synthase activity K01733,K15527 - 2.5.1.76,4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002125 501.0
DYD3_k127_4641930_1 gluconolactonase activity K01053 - 3.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 417.0
DYD3_k127_4641930_2 Thioredoxin-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000441 359.0
DYD3_k127_4641930_3 Cupin 2, conserved barrel domain protein K11477 - - 0.00000000000000000000000000000000004891 143.0
DYD3_k127_4641930_4 Cupin 2, conserved barrel domain protein K11477 - - 0.000000000000000000000000000000003518 130.0
DYD3_k127_4641930_5 Domain of unknown function (DUF1611_N) Rossmann-like domain - - - 0.000000000000000000004756 107.0
DYD3_k127_4641930_6 Thioredoxin-like - - - 0.00000000001978 67.0
DYD3_k127_4646992_0 Amidohydrolase family K06015 - 3.5.1.81 5.996e-246 773.0
DYD3_k127_4646992_1 Tetratricopeptide repeat K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002143 618.0
DYD3_k127_4646992_2 Peptidase family S58 K01266 - 3.4.11.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006942 452.0
DYD3_k127_4646992_3 SdrD B-like domain - - - 0.000000000000000000000000000000000000000000000000006457 198.0
DYD3_k127_4655665_0 Cytochrome C biogenesis protein transmembrane region K04084 - 1.8.1.8 0.00000000000000000000000000000000000000001468 160.0
DYD3_k127_4660276_0 HI0933-like protein K07007 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003564 409.0
DYD3_k127_4665023_0 PFAM Protein kinase domain - - - 0.00000139 61.0
DYD3_k127_4670061_0 Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX K03405 - 6.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004297 595.0
DYD3_k127_4670061_1 MOSC N-terminal beta barrel domain K07140 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001409 329.0
DYD3_k127_4670061_2 Tetratricopeptide repeat K12132 - 2.7.11.1 0.0000000000000000000000000000000000000001143 153.0
DYD3_k127_4670061_3 Tetratricopeptide repeat K12132 - 2.7.11.1 0.0000000000000000000000000002344 114.0
DYD3_k127_4670061_4 von Willebrand factor (vWF) type A domain K07114 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000007216 86.0
DYD3_k127_4672079_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006069 571.0
DYD3_k127_4672079_1 PhoH-like protein K06217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000303 334.0
DYD3_k127_4672079_2 CBS domain - - - 0.00000000000000000000000000000000000000000000000000000000000002861 230.0
DYD3_k127_4672079_3 Protein of unknown function (DUF502) - - - 0.0000000000000000000000000000000000001523 152.0
DYD3_k127_4672079_4 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.0000000000000002649 92.0
DYD3_k127_4672079_5 Involved in DNA repair and RecF pathway recombination K03584 - - 0.0000000003384 66.0
DYD3_k127_4672079_6 histidyl-tRNA synthetase K01892 - 6.1.1.21 0.00005876 49.0
DYD3_k127_4715792_0 Pseudouridine synthase K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000005421 220.0
DYD3_k127_4715792_1 Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.000000000000000000000000000000000000000000000000000002535 200.0
DYD3_k127_4715792_2 Tetratricopeptide repeat - - - 0.000000000000000000000000000003564 131.0
DYD3_k127_4715792_3 gamma-carboxymuconolactone decarboxylase subunit - - - 0.000000000000000000001985 104.0
DYD3_k127_4725365_0 MMPL family K03296 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002035 394.0
DYD3_k127_4725365_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000001561 153.0
DYD3_k127_4735841_0 Belongs to the ParB family K03497 - - 0.00000000000000000000000000000000000000000000000006773 184.0
DYD3_k127_4735841_1 Peptidase, M23 - - - 0.0000000000000000000000000000000003543 142.0
DYD3_k127_4740048_0 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 304.0
DYD3_k127_4740048_1 Protein of unknown function (DUF2723) - - - 0.000000000000000000000000000000000000001287 154.0
DYD3_k127_4740048_2 PFAM Methyltransferase type 11 - - - 0.00000000000000001596 92.0
DYD3_k127_4740048_3 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.000000000000001569 78.0
DYD3_k127_4740048_4 Lysylphosphatidylglycerol synthase TM region - - - 0.00000000000007119 83.0
DYD3_k127_4740576_0 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 GO:0002097,GO:0002100,GO:0006139,GO:0006382,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016553,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 3.5.4.33 0.000000000000000000000000000000000000000000000005293 178.0
DYD3_k127_4740576_1 Recombinase zinc beta ribbon domain K06400 - - 0.000004109 53.0
DYD3_k127_4771252_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007612 335.0
DYD3_k127_4773868_0 Peptidase M1, membrane alanine aminopeptidase K01256 - 3.4.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007505 391.0
DYD3_k127_4773868_1 COG0823 Periplasmic component of the Tol biopolymer transport system - - - 0.0000000000000000000000000000000000000000000000000000000547 223.0
DYD3_k127_4773868_11 amine dehydrogenase activity - - - 0.0006801 52.0
DYD3_k127_4773868_2 Thioredoxin-like - - - 0.00000000000000000002296 104.0
DYD3_k127_4773868_3 extracellular matrix structural constituent - - - 0.0000000000000000001201 104.0
DYD3_k127_4773868_4 Protein of unknown function (DUF3570) - - - 0.00000000000001147 87.0
DYD3_k127_4773868_5 Glycosyl hydrolase family 70 K01142,K01176 - 3.1.11.2,3.2.1.1 0.0000000004844 74.0
DYD3_k127_4773868_6 Involved in the tonB-independent uptake of proteins K03641 - - 0.000000007257 68.0
DYD3_k127_4773868_7 Bacterial SH3 domain - - - 0.0000003868 61.0
DYD3_k127_4773868_9 lipolytic protein G-D-S-L family - - - 0.00004848 55.0
DYD3_k127_4777973_0 Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002524 437.0
DYD3_k127_4777973_1 PFAM Alcohol dehydrogenase K13953 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 321.0
DYD3_k127_4777973_2 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000001766 253.0
DYD3_k127_4777973_3 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000004592 86.0
DYD3_k127_4777973_4 Homocysteine S-methyltransferase K00547 - 2.1.1.10 0.000000005052 59.0
DYD3_k127_4785471_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000593 505.0
DYD3_k127_4785471_1 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.000000000000000000000000000000000000000000000000000000003016 208.0
DYD3_k127_4785471_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000009962 160.0
DYD3_k127_4800540_0 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001867 312.0
DYD3_k127_4800540_1 ADP-ribosylation factor family K06883 GO:0008150,GO:0032879,GO:0032880,GO:0050789,GO:0065007 - 0.000000000000000000000000000000000000000000000000000000000000000008748 248.0
DYD3_k127_4800540_2 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.0000000000000000000000000000000000000000000000000000000000001958 224.0
DYD3_k127_4800540_3 Roadblock/LC7 domain - - - 0.0000000000000000000000000000000000004515 145.0
DYD3_k127_4800540_4 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.000000000000000007247 95.0
DYD3_k127_4821054_0 Saccharopine dehydrogenase C-terminal domain K19064 - 1.4.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003153 297.0
DYD3_k127_4821054_1 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.0000000000000000000000000000000000000000000000000004791 186.0
DYD3_k127_4821054_2 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K12339 - 2.5.1.47 0.00008456 46.0
DYD3_k127_4845272_0 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007543 452.0
DYD3_k127_4845272_1 Subtilase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 463.0
DYD3_k127_48512_0 DNA polymerase III alpha subunit K02337,K14162 GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002628 575.0
DYD3_k127_48512_1 N-acetylmuramoyl-L-alanine amidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002937 310.0
DYD3_k127_48512_2 Psort location OuterMembrane, score - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 323.0
DYD3_k127_48512_3 Activator of Hsp90 ATPase 1 family protein - - - 0.0000000000000000000000000000000000000000002835 164.0
DYD3_k127_48512_4 Spondin_N - - - 0.000000000000000000000000000000000000009719 157.0
DYD3_k127_48512_5 Molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 - - 0.0000000000000000000003369 101.0
DYD3_k127_48512_6 extracellular matrix structural constituent - - - 0.00000000004652 74.0
DYD3_k127_48512_7 response regulator K02282,K07687,K07688,K07689,K07690 - - 0.000000000138 69.0
DYD3_k127_4865964_0 PFAM Aminotransferase class I and II K11358 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 474.0
DYD3_k127_4865964_1 ATPase associated with various cellular K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005314 472.0
DYD3_k127_4865964_2 Protein of unknown function DUF58 - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000352 354.0
DYD3_k127_4865964_3 - - - - 0.0000000000000000000000000000000000000000001774 172.0
DYD3_k127_4865964_4 inositol 2-dehydrogenase activity - - - 0.00000000000000000000000000000000000000006881 164.0
DYD3_k127_4865964_5 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.000000000000000000000000000008804 137.0
DYD3_k127_4865964_6 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000008691 83.0
DYD3_k127_4865964_7 PA26 p53-induced protein (sestrin) - - - 0.00000000000001875 78.0
DYD3_k127_4865964_8 Psort location CytoplasmicMembrane, score - - - 0.000008642 57.0
DYD3_k127_4867995_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.0 1556.0
DYD3_k127_4867995_1 Dihydroorotate dehydrogenase K00226 - 1.3.98.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 395.0
DYD3_k127_4867995_2 DNA-binding response regulator K07713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003846 284.0
DYD3_k127_4867995_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.00000000000000000000000000000000000000000000000000000000000001056 226.0
DYD3_k127_4867995_4 amine dehydrogenase activity K21449 - - 0.00000000000000000000000000000000000000001315 162.0
DYD3_k127_4867995_5 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.000000000000000000000000000000000004598 151.0
DYD3_k127_4867995_6 transcriptional regulator, Rrf2 family - - - 0.0000000000000000002729 95.0
DYD3_k127_4867995_7 Hemerythrin HHE cation binding domain - - - 0.0000003973 60.0
DYD3_k127_4886416_0 PA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000165 260.0
DYD3_k127_4886416_1 Subtilase family - - - 0.00000000000000000000000000000000000000000000000005468 187.0
DYD3_k127_4886416_2 LVIVD repeat K01179 - 3.2.1.4 0.00000000000000001159 99.0
DYD3_k127_4886416_3 Belongs to the aldehyde dehydrogenase family K00128,K00130 - 1.2.1.3,1.2.1.8 0.0005464 46.0
DYD3_k127_490868_0 transporter - - - 1.678e-234 737.0
DYD3_k127_490868_1 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001388 282.0
DYD3_k127_490868_2 cellulose binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002169 276.0
DYD3_k127_490868_3 sterol desaturase - - - 0.000000000000000000000000000000000000000000000000000000000000000433 229.0
DYD3_k127_490868_4 Endonuclease V K05982 - 3.1.21.7 0.00000000000000000000000000000000000000000000000000000006446 209.0
DYD3_k127_490868_5 exo-alpha-(2->6)-sialidase activity - - - 0.0000000000000000000000000000001093 144.0
DYD3_k127_490868_6 amino acid activation for nonribosomal peptide biosynthetic process K06045 - 4.2.1.129,5.4.99.17 0.0000000000000002201 94.0
DYD3_k127_490868_7 Evidence 5 No homology to any previously reported sequences - - - 0.00000003195 67.0
DYD3_k127_490868_8 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0000102 55.0
DYD3_k127_4927534_0 Zinc carboxypeptidase - - - 8.435e-249 805.0
DYD3_k127_4927534_1 TrkA-C domain K03455 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002199 450.0
DYD3_k127_4927534_10 HEAT repeats - - - 0.000000000000006352 89.0
DYD3_k127_4927534_2 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 386.0
DYD3_k127_4927534_3 SMART Metal-dependent phosphohydrolase, HD region K07023 - - 0.0000000000000000000000000000000000000000000000000000000000000000001032 236.0
DYD3_k127_4927534_4 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000324 246.0
DYD3_k127_4927534_5 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000000002076 201.0
DYD3_k127_4927534_6 Pfam Cation efflux - - - 0.00000000000000000000000000000000000000000000004096 177.0
DYD3_k127_4927534_7 Sulfatase-modifying factor enzyme 1 K20333 - - 0.0000000000000000000000000000000000000000000002426 180.0
DYD3_k127_4927534_8 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000000000000000000000000000000000006692 175.0
DYD3_k127_4927534_9 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.000000000000000000000002521 117.0
DYD3_k127_4981252_0 Oligoendopeptidase f - - - 9.406e-240 760.0
DYD3_k127_4981252_1 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001427 265.0
DYD3_k127_4991726_0 Peptidase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000511 423.0
DYD3_k127_4991726_1 Protein of unknown function (DUF819) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000058 243.0
DYD3_k127_4991726_2 - - - - 0.000000000000000000000000002574 126.0
DYD3_k127_4991726_3 - - - - 0.0004512 44.0
DYD3_k127_4996435_0 Alkaline and neutral invertase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004499 444.0
DYD3_k127_4996435_1 PFAM Homoserine dehydrogenase K00003 - 1.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002274 358.0
DYD3_k127_4996435_2 Plays a role in the regulation of phosphate uptake K02039 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009892,GO:0010563,GO:0010966,GO:0019220,GO:0019222,GO:0031323,GO:0031324,GO:0032879,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0042802,GO:0042803,GO:0043269,GO:0043271,GO:0044070,GO:0044424,GO:0044464,GO:0045936,GO:0046983,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051049,GO:0051051,GO:0051174,GO:0065007,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 - 0.000000000000000000000000000000000000000000000000000000045 204.0
DYD3_k127_4996435_3 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000422 194.0
DYD3_k127_4996435_4 Calcineurin-like phosphoesterase - - - 0.000000000000000000000000000498 123.0
DYD3_k127_4996435_5 translation initiation factor activity K03699 - - 0.000000000000000006451 93.0
DYD3_k127_5002279_0 adenosine deaminase K01488 - 3.5.4.4 0.000000000000000000000000000000001696 135.0
DYD3_k127_5002279_1 cellulose binding K08604,K12132 - 2.7.11.1,3.4.24.25 0.00000000000000000000001316 118.0
DYD3_k127_5002279_2 - - - - 0.0000007978 63.0
DYD3_k127_5006357_0 Belongs to the peptidase M24B family K01262 - 3.4.11.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004306 426.0
DYD3_k127_5006357_1 - - - - 0.000000000000000000000000000000000000000000000002739 183.0
DYD3_k127_5006357_2 sirohydrochlorin cobaltochelatase activity K03794,K03795 - 4.99.1.3,4.99.1.4 0.0000000000000000000000000001967 121.0
DYD3_k127_5006357_3 Uncharacterized conserved protein (DUF2203) - - - 0.0000000000000000000819 94.0
DYD3_k127_5006357_4 LPXTG-motif cell wall anchor domain - - - 0.0000000000000000005576 99.0
DYD3_k127_5006357_5 Cobalamin B12-binding domain protein - - - 0.000000000004048 69.0
DYD3_k127_5006357_6 Domain of unknown function (DUF1731) K07071 - - 0.000000008228 59.0
DYD3_k127_5006357_7 Domain of unknown function (DUF378) K09779 - - 0.0003224 51.0
DYD3_k127_5018740_0 MFS transporter K11381 - 1.2.4.4 4.622e-298 944.0
DYD3_k127_5018740_1 Acyl-CoA dehydrogenase K00252 - 1.3.8.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004244 559.0
DYD3_k127_5018740_2 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.0000000000000000000000000000000000000000475 158.0
DYD3_k127_5068959_0 Prolyl oligopeptidase K01322 - 3.4.21.26 2.319e-294 919.0
DYD3_k127_5068959_1 Carbamoyltransferase C-terminus K00612 - - 9.365e-254 794.0
DYD3_k127_5068959_2 Belongs to the RimK family K05844 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006585 485.0
DYD3_k127_5068959_3 Succinylglutamate desuccinylase aspartoacylase K06987 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002048 373.0
DYD3_k127_5068959_4 Peptidase family S41 - - - 0.0000000000000000000000000000000000000000000000004967 194.0
DYD3_k127_5068959_5 Putative ATP-dependant zinc protease - - - 0.00000000000000000000000000000000000000000000000456 177.0
DYD3_k127_5068959_6 - - - - 0.000000000000000000000000000000000000000003535 170.0
DYD3_k127_5068959_7 metallocarboxypeptidase activity - - - 0.0000000000000000000000001052 125.0
DYD3_k127_5078242_0 ABC transporter substrate-binding protein K02027 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002167 481.0
DYD3_k127_5078242_1 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 383.0
DYD3_k127_5078242_2 transmembrane transport K02025,K15771 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000132 370.0
DYD3_k127_5078242_3 ABC-type sugar transport system, permease component K02026 - - 0.00000000001409 77.0
DYD3_k127_5096948_0 Protein conserved in bacteria K09927 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005331 261.0
DYD3_k127_5096948_1 regulation of maintenance of mitotic sister chromatid cohesion, telomeric K10799 GO:0000209,GO:0000226,GO:0000228,GO:0000242,GO:0000278,GO:0000781,GO:0000784,GO:0000922,GO:0003674,GO:0003824,GO:0003950,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005643,GO:0005654,GO:0005694,GO:0005737,GO:0005794,GO:0005813,GO:0005815,GO:0005819,GO:0005829,GO:0005856,GO:0006355,GO:0006357,GO:0006464,GO:0006468,GO:0006471,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007052,GO:0007063,GO:0007088,GO:0007346,GO:0008104,GO:0008150,GO:0008152,GO:0008270,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009967,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010564,GO:0010604,GO:0010605,GO:0010628,GO:0010638,GO:0010639,GO:0010646,GO:0010647,GO:0010948,GO:0012505,GO:0015630,GO:0016020,GO:0016043,GO:0016310,GO:0016567,GO:0016604,GO:0016740,GO:0016757,GO:0016763,GO:0018105,GO:0018107,GO:0018193,GO:0018209,GO:0018210,GO:0019219,GO:0019222,GO:0019538,GO:0022402,GO:0022607,GO:0023051,GO:0023056,GO:0030111,GO:0030162,GO:0030177,GO:0031090,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031331,GO:0031965,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032204,GO:0032205,GO:0032206,GO:0032210,GO:0032212,GO:0032268,GO:0032270,GO:0032446,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033045,GO:0033046,GO:0033047,GO:0033048,GO:0033365,GO:0034091,GO:0034092,GO:0034182,GO:0034183,GO:0034502,GO:0034613,GO:0036211,GO:0042176,GO:0042393,GO:0043085,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043392,GO:0043412,GO:0044085,GO:0044087,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044450,GO:0044451,GO:0044454,GO:0044464,GO:0045732,GO:0045786,GO:0045839,GO:0045862,GO:0045875,GO:0045893,GO:0045930,GO:0045934,GO:0045935,GO:0045944,GO:0046872,GO:0046914,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0050789,GO:0050790,GO:0050794,GO:0051052,GO:0051053,GO:0051054,GO:0051098,GO:0051100,GO:0051101,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051225,GO:0051246,GO:0051247,GO:0051252,GO:0051254,GO:0051338,GO:0051347,GO:0051641,GO:0051726,GO:0051783,GO:0051784,GO:0051972,GO:0051973,GO:0051983,GO:0051985,GO:0060255,GO:0060828,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070198,GO:0070212,GO:0070213,GO:0070647,GO:0070727,GO:0070925,GO:0071704,GO:0071840,GO:0072686,GO:0080090,GO:0090263,GO:0090364,GO:0097110,GO:0097431,GO:0098687,GO:1901564,GO:1902680,GO:1902850,GO:1903047,GO:1903050,GO:1903052,GO:1903362,GO:1903364,GO:1903506,GO:1903508,GO:1904353,GO:1904355,GO:1904356,GO:1904357,GO:1904358,GO:1904742,GO:1904743,GO:1904907,GO:1904908,GO:2000058,GO:2000060,GO:2000112,GO:2000278,GO:2000573,GO:2001141,GO:2001251,GO:2001252 2.4.2.30 0.00000000000000000000000000006622 126.0
DYD3_k127_51008_0 Bacterial sugar transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007499 293.0
DYD3_k127_51008_1 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.00000000000000000000000000000000000000000000000003979 184.0
DYD3_k127_51008_2 involved in lipopolysaccharide - - - 0.00000000003204 71.0
DYD3_k127_51008_3 - - - - 0.00009476 53.0
DYD3_k127_51040_0 protein secretion K08651 - 3.4.21.66 0.00000000004963 75.0
DYD3_k127_51080_0 Catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia K01426 - 3.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002084 286.0
DYD3_k127_51080_1 peptidase M24B X-Pro dipeptidase aminopeptidase domain protein K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000000004444 272.0
DYD3_k127_5108562_0 Aldehyde dehydrogenase family K04021 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 296.0
DYD3_k127_5108562_1 glucosamine-1-phosphate N-acetyltransferase activity K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000004445 230.0
DYD3_k127_5108562_2 COGs COG4577 Carbon dioxide concentrating mechanism carboxysome shell protein K04027 - - 0.00000000000000000000000000000000136 133.0
DYD3_k127_5108562_3 Ethanolamine utilisation protein EutN/carboxysome - - - 0.00000000000000000000000003261 110.0
DYD3_k127_511226_0 cellulose binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000664 462.0
DYD3_k127_511226_1 PFAM RNA-directed DNA polymerase (reverse transcriptase) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003539 346.0
DYD3_k127_511226_2 Evidence 5 No homology to any previously reported sequences - - - 0.0000000000000000004478 102.0
DYD3_k127_5130074_0 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 GO:0003674,GO:0003824,GO:0004749,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016772,GO:0016778,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003605 375.0
DYD3_k127_5130074_1 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.000000000000000000000000000000000000000000000000001889 192.0
DYD3_k127_5130074_2 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.00000000000000000000000000000000000000000000324 170.0
DYD3_k127_5130074_3 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000006172 147.0
DYD3_k127_5138916_0 NlpC/P60 family K20742,K21471 - 3.4.14.13 0.00000000000000000000000000000000000000000002437 174.0
DYD3_k127_5138916_1 PFAM Outer membrane efflux protein K03287 - - 0.00000000000001191 87.0
DYD3_k127_5138916_2 nucleic acid binding protein containing the AN1-type Zn-finger K07059 - - 0.0000000000002638 82.0
DYD3_k127_5138916_3 Peptidase M56 - - - 0.0000000000005378 83.0
DYD3_k127_5138916_4 biopolymer transport protein K03559 - - 0.00000000000209 73.0
DYD3_k127_5138916_5 biopolymer transport protein K03559 - - 0.000000000002869 72.0
DYD3_k127_5156515_0 Molydopterin dinucleotide binding domain K08352 - 1.8.5.5 0.000000000000000000000000000007258 125.0
DYD3_k127_5156515_1 amine dehydrogenase activity K21449 - - 0.000000000000000000000004341 113.0
DYD3_k127_5156515_2 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000002637 103.0
DYD3_k127_5157225_0 DEAD DEAH box helicase domain protein K06877 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007202 258.0
DYD3_k127_5157225_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000008485 142.0
DYD3_k127_5161041_0 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K01007,K08483 - 2.7.3.9,2.7.9.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005924 487.0
DYD3_k127_5161041_1 PTS HPr component phosphorylation site - - - 0.0000000000001699 79.0
DYD3_k127_5163975_0 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02372,K02535,K13599,K16363 GO:0003674,GO:0003824,GO:0016829,GO:0016835,GO:0016836,GO:0019171 3.5.1.108,4.2.1.59 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 414.0
DYD3_k127_5163975_1 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002262 299.0
DYD3_k127_5163975_2 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.00000000000000000000000000000000000000000000000000000000007136 220.0
DYD3_k127_5163975_3 unfolded protein binding K06142 - - 0.000000000000000000003659 101.0
DYD3_k127_5163975_4 Surface antigen K07277 GO:0005575,GO:0005623,GO:0008104,GO:0008150,GO:0009279,GO:0009987,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032991,GO:0033036,GO:0034613,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044425,GO:0044462,GO:0044464,GO:0045184,GO:0045229,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0061024,GO:0070727,GO:0071709,GO:0071840,GO:0071944,GO:0072657,GO:0090150,GO:0098552,GO:0098796,GO:1990063 - 0.0008002 42.0
DYD3_k127_5171905_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000853 220.0
DYD3_k127_5171905_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000008109 119.0
DYD3_k127_5173694_0 WD40-like Beta Propeller Repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007937 430.0
DYD3_k127_5173694_1 STAS domain K03321 - - 0.000000000000000000000000000000000000000000000000000001943 208.0
DYD3_k127_5173694_2 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 GO:0000287,GO:0003674,GO:0003824,GO:0004735,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016020,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0018130,GO:0019752,GO:0030145,GO:0040007,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0046914,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.5.1.2 0.0000000000000000000000000000000000000000000000001042 187.0
DYD3_k127_5173694_3 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.000000000000000000002785 109.0
DYD3_k127_5175052_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000852 426.0
DYD3_k127_5175052_1 Transporter associated domain - - - 0.00000000000000000000000000000000000000000000000000000000594 215.0
DYD3_k127_5175052_2 Domain of unknown function DUF21 - - - 0.000000000000000000000004425 119.0
DYD3_k127_5190637_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 2.765e-206 651.0
DYD3_k127_5190637_1 electron transfer flavoprotein, alpha subunit K03522 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001509 282.0
DYD3_k127_5190637_2 Histone deacetylase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003811 272.0
DYD3_k127_5190637_3 Electron transfer flavoprotein domain K03521 - - 0.000000000000000000000000000000000000000000000000000000000000000000254 241.0
DYD3_k127_5190637_4 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.000000000000000000000000000000000000000000006332 169.0
DYD3_k127_5190637_5 solute sodium symporter, small subunit - - - 0.00000000000000000000000000000006648 127.0
DYD3_k127_5190637_6 Dipeptidase - - - 0.00000000002627 77.0
DYD3_k127_5190637_7 COG3209 Rhs family protein K01337 - 3.4.21.50 0.00001934 48.0
DYD3_k127_5217951_0 TIGRFAM threonine synthase K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 327.0
DYD3_k127_5217951_1 diphthine synthase activity K03086,K06867 - - 0.000000000000000004206 94.0
DYD3_k127_5231915_0 Amidohydrolase family K01464 - 3.5.2.2 0.000000003717 58.0
DYD3_k127_5272225_0 PFAM peptidase M13, neprilysin K01415,K07386 - 3.4.24.71 8.355e-228 725.0
DYD3_k127_5272225_1 radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000166 525.0
DYD3_k127_5272225_2 Bacterial extracellular solute-binding proteins, family 5 Middle K15580 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001716 435.0
DYD3_k127_5272225_3 Belongs to the arylamine N-acetyltransferase family K00675 - 2.3.1.118 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002919 317.0
DYD3_k127_5272225_4 PFAM Binding-protein-dependent transport system inner membrane component K02033,K15581,K15585 - - 0.000000000000000000000000000000000000000000000000000000000001104 224.0
DYD3_k127_5272225_5 integral membrane protein - - - 0.00002247 58.0
DYD3_k127_5272225_6 aminopeptidase N - - - 0.0001299 55.0
DYD3_k127_527397_0 Transglycosylase K05366 GO:0003674,GO:0005488,GO:0005515,GO:0042802 2.4.1.129,3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002571 524.0
DYD3_k127_527397_1 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000002837 254.0
DYD3_k127_527397_2 Proline dehydrogenase K00318 - - 0.00000000000394 66.0
DYD3_k127_5276790_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 8.685e-228 747.0
DYD3_k127_5276790_1 COG0038 Chloride channel protein EriC K03281 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 325.0
DYD3_k127_5287907_0 Nucleotidyl transferase AbiEii toxin, Type IV TA system - - - 0.000000000000000000000000000000001883 140.0
DYD3_k127_5287907_1 IrrE N-terminal-like domain K21686 - - 0.00001441 56.0
DYD3_k127_5291211_0 CarboxypepD_reg-like domain - - - 0.0000000000000000000000000000008646 141.0
DYD3_k127_5291211_1 - - - - 0.0000000000000002027 92.0
DYD3_k127_5295122_0 Fatty acid desaturase K10255 - 1.14.19.23,1.14.19.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 371.0
DYD3_k127_5295122_1 Arsenical pump membrane protein K03893 - - 0.0000000000000000000000000000000001182 138.0
DYD3_k127_5295122_2 exo-alpha-(2->6)-sialidase activity - - - 0.000000000000000000000000004536 128.0
DYD3_k127_5295122_3 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain K07117 - - 0.00000000000000000002784 103.0
DYD3_k127_5295122_4 extracellular matrix structural constituent - - - 0.000000000000003337 90.0
DYD3_k127_5295122_5 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain - - - 0.00000000000006104 82.0
DYD3_k127_5301111_0 transcription factor binding K02584,K11914 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002276 308.0
DYD3_k127_5301111_1 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000000000000000000000017 115.0
DYD3_k127_5309129_0 glutamyl-tRNA reductase activity K02407,K02492 GO:0005575,GO:0005623,GO:0009288,GO:0042597,GO:0042995,GO:0043226,GO:0043228,GO:0044464,GO:0055040 1.2.1.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009505 322.0
DYD3_k127_5309129_1 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor region K03407,K07678,K18143 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000001939 263.0
DYD3_k127_5309129_10 Alkylmercury lyase - - - 0.000000000000000002955 91.0
DYD3_k127_5309129_11 Alkylmercury lyase - - - 0.000000001233 61.0
DYD3_k127_5309129_2 glycosyl transferase group 1 K00754 - - 0.0000000000000000000000000000000000000000000000000000000000000000479 242.0
DYD3_k127_5309129_3 involved in cell wall biogenesis - - - 0.0000000000000000000000000000000000000000000000000000000000685 219.0
DYD3_k127_5309129_4 protein conserved in bacteria K09927 - - 0.00000000000000000000000000000000000000000000000000005414 192.0
DYD3_k127_5309129_5 metal-dependent phosphohydrolase, HD sub domain K07814 - - 0.000000000000000000000000000000000000000000000000000253 207.0
DYD3_k127_5309129_6 cytochrome complex assembly - - - 0.000000000000000000000000000000000000003912 156.0
DYD3_k127_5309129_7 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.000000000000000000000000000000003781 133.0
DYD3_k127_5309129_8 Indole-3-glycerol phosphate synthase K01609 - 4.1.1.48 0.000000000000000000000000000000008874 136.0
DYD3_k127_5309129_9 cheY-homologous receiver domain K11443 - - 0.0000000000000000000000000009809 119.0
DYD3_k127_5316206_0 Belongs to the GPI family K01810,K13810 - 2.2.1.2,5.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002332 604.0
DYD3_k127_5316206_1 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 531.0
DYD3_k127_5316206_2 Sodium:sulfate symporter transmembrane region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003702 442.0
DYD3_k127_5316206_3 Domain of unknown function (DUF4301) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003682 413.0
DYD3_k127_5333609_0 domain protein - - - 1.057e-266 887.0
DYD3_k127_5333609_1 GMP synthase (glutamine-hydrolyzing) activity K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030312,GO:0034404,GO:0034641,GO:0034654,GO:0040007,GO:0042278,GO:0042451,GO:0042455,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 0.000000000000000000000000000000004028 134.0
DYD3_k127_5333609_2 protein secretion K20276 - - 0.000000002309 72.0
DYD3_k127_5333609_3 metallophosphoesterase - - - 0.000000009116 70.0
DYD3_k127_5333609_4 Biopolymer transport protein K03560 - - 0.000004496 55.0
DYD3_k127_5333609_5 ompA family - - - 0.0000365 55.0
DYD3_k127_5333609_6 Biopolymer transport protein K03559,K03560 - - 0.00004662 53.0
DYD3_k127_5333609_7 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00008225 54.0
DYD3_k127_536298_0 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001663 383.0
DYD3_k127_536298_1 heat shock protein binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008215 397.0
DYD3_k127_536298_2 heat shock protein binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001134 291.0
DYD3_k127_536298_3 ferredoxin-NADP+ reductase activity - - - 0.00000000000000000000000000000000000000000003208 179.0
DYD3_k127_5366892_0 Beta-lactamase superfamily domain K06136 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006355 331.0
DYD3_k127_5366892_1 Cadherin repeats. - - - 0.0000000000000000000000000000000000000000000000000000000003444 229.0
DYD3_k127_5366892_2 heavy metal translocating P-type ATPase K17686 - 3.6.3.54 0.00003664 51.0
DYD3_k127_5386810_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009957 284.0
DYD3_k127_5386810_1 membrane - - - 0.000000000000000000000000000000000000000000003129 174.0
DYD3_k127_5386810_2 LytTr DNA-binding domain K02477 - - 0.0000000000000000000000000000000000000000009609 159.0
DYD3_k127_5386810_3 PFAM Alcohol dehydrogenase K13953 - 1.1.1.1 0.00000000000000000000000000005979 123.0
DYD3_k127_5386810_4 membrane - - - 0.00000000000000811 79.0
DYD3_k127_5390961_0 long-chain fatty acid transporting porin activity - - - 0.00000000000000000000000000000000000000000000000003146 192.0
DYD3_k127_5390961_1 - - - - 0.0000000000000000000139 106.0
DYD3_k127_5390961_2 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.0001938 48.0
DYD3_k127_5392266_0 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002369 319.0
DYD3_k127_5392266_1 Barrel-sandwich domain of CusB or HlyD membrane-fusion K02005 - - 0.00000000000000000000000000000000000000000000001187 187.0
DYD3_k127_5392266_2 PFAM Glyoxalase Bleomycin resistance protein Dioxygenase superfamily K06996 - - 0.0000000000000000003264 93.0
DYD3_k127_5392266_4 COG0457 FOG TPR repeat - - - 0.0000000000001336 84.0
DYD3_k127_5392266_5 RND efflux system, outer membrane lipoprotein K18903 - - 0.000058 55.0
DYD3_k127_5392266_6 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00008953 53.0
DYD3_k127_5423881_0 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008947 420.0
DYD3_k127_5423881_1 major pilin protein fima - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002627 261.0
DYD3_k127_5436651_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009507,GO:0009536,GO:0040007,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464 2.4.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003345 514.0
DYD3_k127_5436651_1 Ribonuclease E/G family K08301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004961 492.0
DYD3_k127_544560_0 Sigma-70, region 4 K03088 - - 0.0000000009356 60.0
DYD3_k127_544560_1 extracellular matrix structural constituent - - - 0.0000003135 63.0
DYD3_k127_544560_2 surface antigen - - - 0.000002405 60.0
DYD3_k127_5484337_0 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003418 298.0
DYD3_k127_5484337_1 PIN domain K07064 - - 0.000000006903 66.0
DYD3_k127_5489177_0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004266 574.0
DYD3_k127_5489177_1 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 411.0
DYD3_k127_5489177_2 Belongs to the CDS family K00981 - 2.7.7.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004102 398.0
DYD3_k127_5489177_3 Phosphate acyltransferases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001719 276.0
DYD3_k127_5489177_4 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.000000000000000000000000000000000000000000000000000000000001007 218.0
DYD3_k127_5489177_5 metal cluster binding - - - 0.00000000000000000000000000000000002534 141.0
DYD3_k127_5489177_6 Dimerisation domain - - - 0.0000000000000000000000004825 106.0
DYD3_k127_5489177_7 Phospholipase/Carboxylesterase K06999 - - 0.00000000006261 71.0
DYD3_k127_5489177_8 CDP-alcohol phosphatidyltransferase - - - 0.0005026 49.0
DYD3_k127_5490750_0 Belongs to the peptidase S8 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009134 534.0
DYD3_k127_5490750_1 neurotransmitter:sodium symporter activity K03308 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003176 476.0
DYD3_k127_5490750_2 Pyridoxal-dependent decarboxylase conserved domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 454.0
DYD3_k127_5490750_3 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 GO:0003674,GO:0003824,GO:0006091,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009055,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0018130,GO:0019438,GO:0022900,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0052693,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.17.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006856 344.0
DYD3_k127_5490750_4 - - - - 0.00000000000000000000000000000000000000000005257 169.0
DYD3_k127_5490750_5 Thioesterase superfamily - - - 0.0000000000000000000005859 103.0
DYD3_k127_5490750_6 extracellular matrix structural constituent - - - 0.000000000000000000005053 110.0
DYD3_k127_5490750_7 Domain of unknown function (DUF4136) - - - 0.0000000000004182 77.0
DYD3_k127_5490750_8 cyclic pyranopterin monophosphate synthase activity K03639,K20967 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009507,GO:0009536,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.22,4.6.1.17 0.000000246 59.0
DYD3_k127_549110_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K08352 - 1.8.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006515 508.0
DYD3_k127_549110_1 Cys Met metabolism K01739,K01760,K01761 - 2.5.1.48,4.4.1.11,4.4.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003448 368.0
DYD3_k127_5492535_0 benzoyl-CoA reductase K04113 - 1.3.7.8 3.555e-195 621.0
DYD3_k127_5492535_1 BadF/BadG/BcrA/BcrD ATPase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001883 424.0
DYD3_k127_5492535_2 benzoyl-CoA reductase K04112 - 1.3.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000002806 248.0
DYD3_k127_5494316_0 gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000000000000000000000000000000000000000001498 224.0
DYD3_k127_5494316_1 PFAM Rhomboid family - - - 0.000000000000000000000000000000000000000000000000000000000002234 219.0
DYD3_k127_5494316_2 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000004518 169.0
DYD3_k127_5494316_3 - - - - 0.000000000000000000000000000000000000000005512 168.0
DYD3_k127_5496817_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 325.0
DYD3_k127_5496817_1 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.0000000000000000000000000000000000000000000000001662 188.0
DYD3_k127_5496817_2 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.000000000000000000000000127 113.0
DYD3_k127_5508124_0 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.0000000000000000000000000000000000003209 149.0
DYD3_k127_5508124_1 - - - - 0.0000000000000000000000006492 109.0
DYD3_k127_5508124_2 Asparagine synthetase B - - - 0.000000000000000000000004285 101.0
DYD3_k127_5508124_3 CAAX protease self-immunity K07052 - - 0.0000002749 63.0
DYD3_k127_5517482_0 Zinc metalloprotease (Elastase) - - - 0.0000000000000000000000000000000207 146.0
DYD3_k127_5517482_1 cellulase activity K01361,K20276 - 3.4.21.96 0.0000006982 56.0
DYD3_k127_5525283_0 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K05996,K07752 - 3.4.17.18,3.4.17.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003407 453.0
DYD3_k127_5525283_1 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 358.0
DYD3_k127_5525283_2 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.000000000000000000000000000000000000000000000000000007929 197.0
DYD3_k127_5525283_3 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase) K01083 - 3.1.3.8 0.0000000000000000000000000000000000000000000009106 179.0
DYD3_k127_5525283_4 Glycosyl transferase, family 2 - - - 0.000000000000000000000000000000000000000000002406 179.0
DYD3_k127_5525283_5 O-Antigen ligase - - - 0.00000000000003279 85.0
DYD3_k127_556668_0 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes - - - 0.0000000000000000000000000000000000000000000000001017 192.0
DYD3_k127_556668_1 extracellular matrix structural constituent - - - 0.00000000000000005876 96.0
DYD3_k127_5571939_0 COG0119 Isopropylmalate homocitrate citramalate synthases K01640 - 4.1.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003761 332.0
DYD3_k127_5571939_1 Carbamoyl-phosphate synthetase large chain domain protein K01961,K01968,K11263 - 6.3.4.14,6.4.1.2,6.4.1.3,6.4.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000002852 267.0
DYD3_k127_5571939_2 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.000000000000000000004425 102.0
DYD3_k127_5571939_3 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - - - 0.00000000000000000004471 104.0
DYD3_k127_5571939_4 carboxylase K01965,K01968 GO:0003674,GO:0003824,GO:0004075,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016053,GO:0016874,GO:0016879,GO:0019216,GO:0019217,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032787,GO:0042304,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046394,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:1901576 6.4.1.3,6.4.1.4 0.0000000000000211 79.0
DYD3_k127_5571939_5 - - - - 0.00000004758 60.0
DYD3_k127_5577479_0 Belongs to the aldehyde dehydrogenase family K00128,K06447 - 1.2.1.3,1.2.1.71 1.068e-217 690.0
DYD3_k127_5577479_1 Sodium:sulfate symporter transmembrane region - - - 1.336e-194 623.0
DYD3_k127_5577479_10 NHL repeat - - - 0.000000000006428 78.0
DYD3_k127_5577479_11 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000007786 71.0
DYD3_k127_5577479_2 lysine biosynthetic process via aminoadipic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004777 628.0
DYD3_k127_5577479_3 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008591 623.0
DYD3_k127_5577479_4 AcrB/AcrD/AcrF family K03296 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001793 599.0
DYD3_k127_5577479_5 AcrB/AcrD/AcrF family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005732 390.0
DYD3_k127_5577479_6 ATP:ADP antiporter activity K01932,K03301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 368.0
DYD3_k127_5577479_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000000000001354 212.0
DYD3_k127_5577479_8 DinB superfamily - - - 0.0000000000000001971 88.0
DYD3_k127_5577479_9 Peptidase M56 - - - 0.00000000000005014 86.0
DYD3_k127_558483_0 PFAM NHL repeat containing protein - - - 0.0000000000000000000000000000000000000000007184 167.0
DYD3_k127_558483_1 Peptidase family M23 - - - 0.000000000000000000000000000000000000001652 167.0
DYD3_k127_558483_2 peptidyl-prolyl cis-trans isomerase activity K01802,K03769,K03770 - 5.2.1.8 0.00000000000000000000000005197 124.0
DYD3_k127_5589596_0 ferredoxin-NADP+ reductase activity K00384,K03671 GO:0000166,GO:0001666,GO:0003674,GO:0003824,GO:0004791,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0008150,GO:0008152,GO:0009628,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0019725,GO:0036094,GO:0036293,GO:0040007,GO:0042221,GO:0042592,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0048037,GO:0050660,GO:0050661,GO:0050662,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070402,GO:0070482,GO:0070887,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901265,GO:1901363,GO:1990748 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005703 396.0
DYD3_k127_5589596_1 Stage II sporulation protein E K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000167 209.0
DYD3_k127_5589596_2 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.00000000000000000000000000000000000000000000000004974 182.0
DYD3_k127_5589596_3 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000002109 161.0
DYD3_k127_5589596_4 haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000002636 133.0
DYD3_k127_559026_0 Molybdenum cofactor synthesis domain protein K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000003175 177.0
DYD3_k127_559026_1 amine dehydrogenase activity K14274 - - 0.0000000000117 78.0
DYD3_k127_559026_2 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000007434 53.0
DYD3_k127_5590866_0 PFAM Glycosyl transferase family 2 - - - 1.856e-305 957.0
DYD3_k127_5590866_1 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009988 497.0
DYD3_k127_5590866_2 RmlD substrate binding domain K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002164 478.0
DYD3_k127_5590866_3 ABC-type multidrug transport system ATPase and permease K06147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006317 306.0
DYD3_k127_5593643_0 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000003464 249.0
DYD3_k127_5597284_0 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 3.442e-266 829.0
DYD3_k127_5597284_1 PFAM peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000238 498.0
DYD3_k127_5597284_2 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009312 484.0
DYD3_k127_5597284_3 Bacterial protein of unknown function (DUF885) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 430.0
DYD3_k127_5597284_4 cAMP biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 351.0
DYD3_k127_5597284_5 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000006102 193.0
DYD3_k127_5597284_6 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter - - - 0.00000000000000000000000000000000000006531 156.0
DYD3_k127_5597284_7 - - - - 0.000000000000000000000000000000005369 139.0
DYD3_k127_5602841_0 Zinc carboxypeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003324 401.0
DYD3_k127_5617238_0 Protein tyrosine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005735 282.0
DYD3_k127_5617238_1 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001623 274.0
DYD3_k127_5617238_2 Involved in the tonB-independent uptake of proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000008944 234.0
DYD3_k127_5623275_0 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00609 - 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001547 384.0
DYD3_k127_5623275_1 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant K02825 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000000003843 235.0
DYD3_k127_5623275_2 O-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000008748 184.0
DYD3_k127_5623275_3 dihydroorotase K01465 GO:0003674,GO:0003824,GO:0004038,GO:0004151,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006145,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046390,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.5.2.3 0.000000000000000000000000000000001029 135.0
DYD3_k127_5628422_0 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001422 359.0
DYD3_k127_5628422_1 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003582 308.0
DYD3_k127_5661996_0 Aminotransferase class-III K01845 - 5.4.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007516 478.0
DYD3_k127_5661996_1 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002733 364.0
DYD3_k127_5661996_2 Copper amine oxidase N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000001632 213.0
DYD3_k127_5661996_3 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.0000000000000000000000000000000000000000000000000111 194.0
DYD3_k127_5661996_4 protein heterodimerization activity - - - 0.00000000000000009124 82.0
DYD3_k127_5661996_5 domain, Protein - - - 0.000000005591 68.0
DYD3_k127_5668996_0 Acetamidase/Formamidase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009994 413.0
DYD3_k127_5668996_1 Dienelactone hydrolase family K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000242 284.0
DYD3_k127_5668996_2 ATP dependent DNA ligase C terminal region K10747 GO:0000287,GO:0003674,GO:0003824,GO:0003909,GO:0003910,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006266,GO:0006271,GO:0006273,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016874,GO:0016886,GO:0022616,GO:0030312,GO:0033554,GO:0034641,GO:0034645,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0071944,GO:0090304,GO:0140097,GO:1901360,GO:1901576 6.5.1.1,6.5.1.6,6.5.1.7 0.00000000000000000000000000000000000000000001063 165.0
DYD3_k127_5668996_3 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.0000000000000000000000000000000000008591 145.0
DYD3_k127_5668996_4 Uncharacterised protein family UPF0047 - - - 0.0000000000000001024 80.0
DYD3_k127_5676070_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 5.319e-262 822.0
DYD3_k127_5688983_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002495 499.0
DYD3_k127_5688983_1 PFAM SPFH domain Band 7 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 348.0
DYD3_k127_5688983_2 Membrane-bound serine protease (ClpP class) K07403 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006381 295.0
DYD3_k127_5688983_3 - K01406 - 3.4.24.40 0.0000000000000000000000000000000000009095 160.0
DYD3_k127_5688983_4 protein secretion K20276 - - 0.000000000001633 70.0
DYD3_k127_5688983_5 - - - - 0.000006671 59.0
DYD3_k127_5727087_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0001871,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009986,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030246,GO:0030247,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2001065 6.1.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 459.0
DYD3_k127_5727087_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885,K09698 - 6.1.1.17,6.1.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006278 427.0
DYD3_k127_5727087_2 prohibitin homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 318.0
DYD3_k127_5727087_3 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000968 284.0
DYD3_k127_5727087_4 BtpA family K06971 - - 0.00000000000000000000000000000000000000000000000000000000000001226 238.0
DYD3_k127_5727087_6 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.0000000000000000000000000003962 117.0
DYD3_k127_5727087_7 - - - - 0.00000000004284 65.0
DYD3_k127_5730538_0 Sugar (and other) transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003478 512.0
DYD3_k127_5730538_1 Belongs to the ABC transporter superfamily K15583 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003224 400.0
DYD3_k127_5730538_2 N-terminal TM domain of oligopeptide transport permease C K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000666 352.0
DYD3_k127_5730538_3 COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components K15581 - - 0.0000000000000000000003138 98.0
DYD3_k127_5730538_4 Outer membrane protein beta-barrel domain - - - 0.00000002301 65.0
DYD3_k127_574698_0 CHAT domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 449.0
DYD3_k127_574698_1 Radical SAM superfamily K06871 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005502 292.0
DYD3_k127_574698_2 Serine threonine protein kinase - - - 0.0000000000000000000000000000000000000000000000000000000000004741 232.0
DYD3_k127_574698_3 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03771 - 5.2.1.8 0.0000000000000000000000000005619 129.0
DYD3_k127_574698_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000003373 73.0
DYD3_k127_574698_5 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K07696 - - 0.000000006631 66.0
DYD3_k127_5764944_0 TIGRFAM acetyl coenzyme A synthetase (ADP forming), alpha domain K01905,K22224 - 6.2.1.13 4.879e-208 668.0
DYD3_k127_5764944_1 - - - - 0.000000000000000000000000000000000000000000000009152 178.0
DYD3_k127_5764944_2 - - - - 0.000000000000000000000000005686 129.0
DYD3_k127_5764944_3 membrane K11622 - - 0.000000000001108 80.0
DYD3_k127_5806766_0 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000007198 190.0
DYD3_k127_5806766_1 Transcriptional regulator K03641 - - 0.0000000000000000000000000000002002 135.0
DYD3_k127_5819710_0 Protease prsW family - - - 0.00001716 56.0
DYD3_k127_5819710_1 Tetratricopeptide repeat - - - 0.00002313 57.0
DYD3_k127_5823365_0 peptidyl-tyrosine sulfation K13992 - - 0.00000000000000000000000000000000000000003078 160.0
DYD3_k127_5823365_1 Haem-binding domain - - - 0.0000000000000000000000000000000002966 137.0
DYD3_k127_5823365_2 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.0000000001717 70.0
DYD3_k127_5846884_0 protein conserved in bacteria K16514 GO:0003674,GO:0003824,GO:0006082,GO:0006725,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016054,GO:0016853,GO:0016860,GO:0016863,GO:0017144,GO:0018918,GO:0018958,GO:0019336,GO:0019396,GO:0019439,GO:0019752,GO:0032787,GO:0042537,GO:0042737,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0071704,GO:0072329,GO:1901360,GO:1901361,GO:1901575,GO:1901615,GO:1901616 5.3.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006788 464.0
DYD3_k127_5846884_1 PFAM aldo keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006315 372.0
DYD3_k127_5846884_2 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002206 296.0
DYD3_k127_5846884_3 Protein of unknown function (DUF502) - - - 0.000000000000000000000000000000000000001126 155.0
DYD3_k127_5846884_4 WD40-like Beta Propeller Repeat K03641 - - 0.000000000000000000000000000000008149 140.0
DYD3_k127_5846884_5 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000004719 105.0
DYD3_k127_5846884_6 PFAM Outer membrane efflux protein - - - 0.00000002434 67.0
DYD3_k127_585680_0 Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively K06215 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0016020,GO:0016829,GO:0016840,GO:0016843,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0040007,GO:0042364,GO:0042802,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046184,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:0072524,GO:0072525,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 4.3.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004239 409.0
DYD3_k127_585680_1 Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS K08681 - 4.3.3.6 0.00000000000000000000000000000000000000000000000001389 186.0
DYD3_k127_585680_2 Belongs to the peptidase M28 family - - - 0.0000000000000000000000000000000000000391 160.0
DYD3_k127_5891126_0 cellulose binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002373 465.0
DYD3_k127_5891126_1 HD domain K07814 - - 0.0000000000000000000000000000000000000002905 168.0
DYD3_k127_5898399_0 PFAM Glycosyl transferase, group 1 K00754 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004206 370.0
DYD3_k127_5898399_1 GlcNAc-PI de-N-acetylase K01463 - - 0.000000000000000000000000000000000000000000000235 176.0
DYD3_k127_5898399_2 COG0737 5'-nucleotidase 2',3'-cyclic phosphodiesterase and related esterases K01081,K01119 - 3.1.3.5,3.1.3.6,3.1.4.16 0.0000004138 61.0
DYD3_k127_5944932_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003356 438.0
DYD3_k127_5949225_0 glutamine synthetase K01915 - 6.3.1.2 1.441e-230 722.0
DYD3_k127_5949225_1 Protein of unknown function (DUF1624) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 527.0
DYD3_k127_5949225_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 389.0
DYD3_k127_5949225_3 Response regulator, receiver K01007 - 2.7.9.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002213 327.0
DYD3_k127_5949225_4 Ankyrin repeats (many copies) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003308 298.0
DYD3_k127_5950114_0 PFAM UBA THIF-type NAD FAD binding K21147 - 2.7.7.80,2.8.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002021 418.0
DYD3_k127_5950114_1 JAB/MPN domain K21140 - 3.13.1.6 0.00000000000000000000000000000000001279 146.0
DYD3_k127_5950114_2 Pyridoxal-phosphate dependent enzyme K12339 - 2.5.1.47 0.00000000000000000000000000000000003218 138.0
DYD3_k127_5950114_3 ThiS family K03636 - - 0.000000000000000000000000000002438 122.0
DYD3_k127_5973192_0 Phosphotransferase enzyme family - - - 0.00000000004793 75.0
DYD3_k127_5994309_0 transposase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005157 300.0
DYD3_k127_5994309_1 Belongs to the 'phage' integrase family - - - 0.00000000000000000000000000000000000000000000000000000000000000004103 233.0
DYD3_k127_6006500_0 Urocanase C-terminal domain K01712 - 4.2.1.49 1.691e-247 781.0
DYD3_k127_6006500_1 Aromatic amino acid lyase K01745 - 4.3.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005253 450.0
DYD3_k127_6006500_2 Belongs to the metallo-dependent hydrolases superfamily. HutI family K01468 - 3.5.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001795 397.0
DYD3_k127_6006500_3 helicase involved in DNA repair and perhaps also replication K03722 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000002354 202.0
DYD3_k127_6006500_4 Tetratricopeptide repeat - - - 0.000000000000002569 85.0
DYD3_k127_6009801_0 phospho-N-acetylmuramoyl-pentapeptide-transferase activity K01000 GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008963,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0030203,GO:0034645,GO:0040007,GO:0042546,GO:0042802,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044464,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004698 347.0
DYD3_k127_6009801_1 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.000000000000000000000000000001638 126.0
DYD3_k127_6020904_0 PglZ domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 547.0
DYD3_k127_6020904_1 Integral membrane sensor signal transduction histidine kinase K07709,K13924 - 2.1.1.80,2.7.13.3,3.1.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000004745 264.0
DYD3_k127_6020904_2 PFAM Uncharacterised P-loop hydrolase UPF0079 K06925 - - 0.00000000000000000000000003347 112.0
DYD3_k127_6020904_3 Radical SAM domain protein - - - 0.0000000000000000339 96.0
DYD3_k127_6020904_4 PFAM Peptidase M22, glycoprotease K14742 - - 0.00009451 55.0
DYD3_k127_6022138_0 long-chain fatty acid transport protein - - - 0.00000000000000000000000000000000000000000000000000008844 198.0
DYD3_k127_6022138_1 - - - - 0.000000000000000000000002251 121.0
DYD3_k127_6022138_2 TonB-dependent receptor - - - 0.00000000000000007879 86.0
DYD3_k127_6028841_0 Pyridoxal-dependent decarboxylase conserved domain K01593,K01634 - 4.1.1.105,4.1.1.28,4.1.2.27 2.583e-218 687.0
DYD3_k127_6028841_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000002486 237.0
DYD3_k127_6028841_2 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567,K10778 - 2.1.1.63 0.00000000000000000000000000000000000000003074 157.0
DYD3_k127_6028841_3 Iron-sulfur cluster assembly protein - - - 0.00000000000000000000000000000007302 127.0
DYD3_k127_6036948_0 Divergent polysaccharide deacetylase K09798 - - 0.00000000000000000000000000000000000000002509 168.0
DYD3_k127_604979_0 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 GO:0003674,GO:0003824,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0016999,GO:0017144,GO:0019752,GO:0030060,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 390.0
DYD3_k127_604979_1 GAF domain - - - 0.000000000000000000000000000000000000000002267 180.0
DYD3_k127_604979_2 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.000000000000000000000000000000000001155 160.0
DYD3_k127_604979_3 Diguanylate cyclase - - - 0.000000000000000000000000000356 131.0
DYD3_k127_604979_4 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.0000000000000000000000006166 121.0
DYD3_k127_6067770_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004692 496.0
DYD3_k127_6067770_1 Belongs to the bacterial solute-binding protein 9 family K02077,K09815,K09818 - - 0.0000000000000000000000000000000000000000000000000000000000001642 233.0
DYD3_k127_6067770_2 ABC 3 transport family K02075 - - 0.000000000000000000000000000000000000000000000000001857 200.0
DYD3_k127_6067770_3 Belongs to the Fur family K03711 - - 0.00000000000000000000000000000000009618 139.0
DYD3_k127_6067770_4 Tfp pilus assembly protein FimV - - - 0.00000000000000000000000000000005996 139.0
DYD3_k127_6085498_0 Peptidase M56 - - - 0.000000002598 70.0
DYD3_k127_6085498_1 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533 - - 0.00000003327 58.0
DYD3_k127_6085498_2 serine threonine protein kinase K12132 - 2.7.11.1 0.0000003172 62.0
DYD3_k127_6107251_0 two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006679 277.0
DYD3_k127_6107251_1 PFAM Phosphoribosyltransferase K02242 - - 0.0000000000000000000000001637 115.0
DYD3_k127_6107251_2 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000000000000001101 108.0
DYD3_k127_6107251_3 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.000000000000000000000003378 112.0
DYD3_k127_6107251_4 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.00000000000000006673 83.0
DYD3_k127_6120070_0 cellulose binding - - - 1.859e-246 779.0
DYD3_k127_6120070_1 Winged helix DNA-binding domain K09927 - - 0.0000000000000000000000005957 119.0
DYD3_k127_6120070_2 protein ubiquitination K10297 - - 0.0001901 55.0
DYD3_k127_6129111_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 1.045e-196 621.0
DYD3_k127_6129111_1 TRAP-type mannitol chloroaromatic compound transport system small permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007712 245.0
DYD3_k127_6129111_2 Phospholipase D. Active site motifs. - - - 0.00000000000000000000000000000000000000000000000000000000000000009778 227.0
DYD3_k127_614223_0 phosphorelay signal transduction system K01338 - 3.4.21.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000932 367.0
DYD3_k127_614223_1 flavin-nucleotide-binding protein structurally related to pyridoxine 5-phosphate oxidase K01768 - 4.6.1.1 0.0000000000000000000000000001726 117.0
DYD3_k127_6142844_0 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.000000000000000000000000000000000000000000000000003272 191.0
DYD3_k127_6142844_1 lysine biosynthetic process via aminoadipic acid - - - 0.0000000000000000000001754 107.0
DYD3_k127_6142844_2 - - - - 0.00000003104 64.0
DYD3_k127_6142844_3 amine dehydrogenase activity K01406 - 3.4.24.40 0.00003261 50.0
DYD3_k127_6156904_0 PFAM aldo keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001045 298.0
DYD3_k127_6156904_1 5'-3' exonuclease, N-terminal resolvase-like domain - - - 0.000000000000000000000000000000000000003498 150.0
DYD3_k127_6156904_2 DinB family - - - 0.00000000000000000000000000000000000008559 148.0
DYD3_k127_6156904_3 transcriptional - - - 0.00000000000000000000000000000000042 135.0
DYD3_k127_6185294_0 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000000000000000000000000000000000000001084 181.0
DYD3_k127_6185294_1 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000003369 149.0
DYD3_k127_6185294_2 PFAM peptidase S9 prolyl oligopeptidase active site domain protein - - - 0.00000000000009039 80.0
DYD3_k127_6192742_0 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 471.0
DYD3_k127_6192742_1 6-phosphofructokinase activity K00850,K21071 - 2.7.1.11,2.7.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000189 443.0
DYD3_k127_6192742_2 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K00134 GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016491,GO:0016620,GO:0016903,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0036094,GO:0042866,GO:0043436,GO:0043891,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055086,GO:0055114,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006695 440.0
DYD3_k127_6192742_3 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000267 277.0
DYD3_k127_6192742_4 Dehydrogenase E1 component K11381 - 1.2.4.4 0.000000000000000000000000000000000000000000000000000000000000000006687 233.0
DYD3_k127_6192742_5 dTDP-4-dehydrorhamnose 3,5-epimerase activity K01790 - 5.1.3.13 0.00000000000000000000000000000000000000000000000000364 187.0
DYD3_k127_6192742_6 Preprotein translocase SecG subunit K03075 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0022857,GO:0022884,GO:0031522,GO:0032978,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0042887,GO:0043952,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.00000000000002437 79.0
DYD3_k127_6216192_0 peptidase K01278 - 3.4.14.5 0.0000000000000000000000000000000000000000000000000000000000000002814 229.0
DYD3_k127_6216192_1 Urate oxidase N-terminal - - - 0.00000000000000000000000000000000001777 145.0
DYD3_k127_6222403_0 Peptidase family M23 K21471 GO:0000920,GO:0001896,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008219,GO:0009273,GO:0009314,GO:0009628,GO:0009987,GO:0012501,GO:0016020,GO:0016787,GO:0030288,GO:0030313,GO:0031975,GO:0032153,GO:0042221,GO:0042493,GO:0042546,GO:0042597,GO:0043085,GO:0044085,GO:0044093,GO:0044464,GO:0050790,GO:0050896,GO:0051301,GO:0051336,GO:0051345,GO:0065007,GO:0065009,GO:0071554,GO:0071840,GO:0071944 - 0.000000000000000000000000000000000000000000000000197 190.0
DYD3_k127_6222403_1 DNA polymerase III, delta subunit K02341 - 2.7.7.7 0.000000000000000000000000000000000006906 153.0
DYD3_k127_6222403_2 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.000000297 59.0
DYD3_k127_6244365_0 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006048 370.0
DYD3_k127_6244365_1 Coenzyme A transferase K01027,K01028,K01034 - 2.8.3.5,2.8.3.8,2.8.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002814 306.0
DYD3_k127_6244365_2 Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3-diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2,3-di-O-phytanyl-sn-glyceryl phosphate) from 2,3-di-O-geranylgeranylglyceryl phosphate (DGGGP) via the hydrogenation of each double bond of the isoprenoid chains K17830 - 1.3.1.101,1.3.7.11 0.00000000000000000000000000000000000000000000000000000000000003625 229.0
DYD3_k127_6244365_3 Protein of unknown function, DUF488 - - - 0.000000000000000000000000000000000000000002511 162.0
DYD3_k127_6244365_4 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000123 163.0
DYD3_k127_6244365_5 coenzyme A transferase K01028 - 2.8.3.5 0.0000000000000007998 85.0
DYD3_k127_6244365_6 - K00176,K07138 - 1.2.7.3 0.000000000006256 69.0
DYD3_k127_6251507_0 XFP C-terminal domain K01621 - 4.1.2.22,4.1.2.9 0.0 1330.0
DYD3_k127_6251507_1 6-phosphogluconate dehydrogenase, C-terminal domain K00033 - 1.1.1.343,1.1.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004933 489.0
DYD3_k127_6251507_2 Exonuclease of the beta-lactamase fold involved in RNA processing K07576 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003764 496.0
DYD3_k127_6251507_3 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002366 448.0
DYD3_k127_6251507_4 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001074 287.0
DYD3_k127_6251507_5 cellulose binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002644 256.0
DYD3_k127_6251507_6 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000004504 238.0
DYD3_k127_6251507_7 amine dehydrogenase activity - - - 0.000000000000007215 88.0
DYD3_k127_626582_0 Prolyl oligopeptidase family - - - 1.095e-245 812.0
DYD3_k127_626582_1 His Kinase A (phosphoacceptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001764 623.0
DYD3_k127_626582_2 Histidine kinase-like ATPase domain K01338,K04757,K06379,K08282,K17752 - 2.7.11.1,3.4.21.53 0.0000000000000000000000000000000000000000000000000000000000003555 222.0
DYD3_k127_626582_3 Glycine betaine K05845 - - 0.0000000000000000000006636 96.0
DYD3_k127_626582_4 amine dehydrogenase activity - - - 0.000000001618 70.0
DYD3_k127_6273340_1 HNH endonuclease - - - 0.000000002028 63.0
DYD3_k127_6273340_2 Glycosyl transferase, family 2 - - - 0.0000005811 60.0
DYD3_k127_6283822_0 acyl-coa dehydrogenase K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003756 438.0
DYD3_k127_6283822_1 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000002248 160.0
DYD3_k127_6283822_2 Belongs to the HAD-like hydrolase superfamily - - - 0.0000000000000000000000000000007338 136.0
DYD3_k127_6310973_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 GO:0003674,GO:0003824,GO:0004018,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016829,GO:0016840,GO:0016842,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046033,GO:0046390,GO:0046483,GO:0055086,GO:0070626,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.3.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004293 424.0
DYD3_k127_6310973_1 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003341 354.0
DYD3_k127_6310973_2 Related to alanyl-tRNA synthetase HxxxH domain K01872,K07050 - 6.1.1.7 0.000000000000000000000000000000000000000000000000000000000001232 224.0
DYD3_k127_6310973_3 Trypsin K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000076 224.0
DYD3_k127_6310973_4 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.00000000000000000000000000000000000000000000000000003476 197.0
DYD3_k127_6310973_5 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000002209 181.0
DYD3_k127_6310973_6 Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates K16785 - - 0.0000000000000000000000000001339 131.0
DYD3_k127_6316725_0 stage II sporulation K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000007923 180.0
DYD3_k127_6316725_1 PFAM response regulator receiver - - - 0.0000000000000000000000000000001981 142.0
DYD3_k127_6316725_2 Tetratricopeptide repeat - - - 0.000000000003619 73.0
DYD3_k127_6316725_3 Histidine kinase-like ATPase domain - - - 0.00005417 53.0
DYD3_k127_6317169_0 Belongs to the glycosyl hydrolase 57 family K22451 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.4.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003332 576.0
DYD3_k127_6317169_1 PTS system, mannose fructose sorbose family, IIB K02745,K10984 - - 0.00000000104 65.0
DYD3_k127_6317169_2 PFAM phosphotransferase system PTS sorbose- specific IIC subunit K02746 - - 0.0000004169 60.0
DYD3_k127_631929_0 DNA polymerase alpha chain like domain K02347 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005242 565.0
DYD3_k127_631929_1 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000001579 262.0
DYD3_k127_631929_2 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000009132 141.0
DYD3_k127_631929_3 4Fe-4S binding domain - - - 0.0000000000000000000000000000009457 127.0
DYD3_k127_631929_4 Rhodanese Homology Domain - - - 0.000000000000000000000001248 105.0
DYD3_k127_6321121_0 Aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 1.442e-225 712.0
DYD3_k127_6327408_0 Aminotransferase class-V - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006046 469.0
DYD3_k127_6327408_1 CorA-like Mg2+ transporter protein K03284 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000506 361.0
DYD3_k127_6327408_2 Protein tyrosine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000705 363.0
DYD3_k127_6338821_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002767 482.0
DYD3_k127_6338821_1 Sodium:neurotransmitter symporter family - - - 0.0000000000000000000000000000000001222 139.0
DYD3_k127_6341912_0 Thiamine pyrophosphate enzyme, central domain K03336 - 3.7.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000262 294.0
DYD3_k127_6341912_1 Xylose isomerase-like TIM barrel K03335 - 4.2.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003673 289.0
DYD3_k127_63508_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007868 503.0
DYD3_k127_63508_1 Serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 395.0
DYD3_k127_635400_0 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K01848 - 5.4.99.2 1.013e-231 729.0
DYD3_k127_635400_1 Cobalamin B12-binding K01849 - 5.4.99.2 0.00000000000000000000000000000000000000000000000001859 183.0
DYD3_k127_635400_2 isobutyryl-CoA mutase activity K07588 - - 0.0000000000000000000000000000000002383 138.0
DYD3_k127_6387671_0 Transglycosylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003373 259.0
DYD3_k127_6387671_1 response to abiotic stimulus K03086,K06867 - - 0.0000000264 63.0
DYD3_k127_6424207_0 Permease YjgP YjgQ family protein K07091,K11720 GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015221,GO:0015399,GO:0015405,GO:0015437,GO:0015920,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0032991,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043190,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1901264,GO:1901505,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006532 309.0
DYD3_k127_6424207_1 Permease YjgP YjgQ K11720 - - 0.000000000000000000000000000003397 130.0
DYD3_k127_643211_0 TIGRFAM gliding motility-associated C-terminal domain - - - 0.00000000000000000009464 99.0
DYD3_k127_643211_1 amine dehydrogenase activity - - - 0.0000000000000000066 94.0
DYD3_k127_643211_2 extracellular matrix structural constituent - - - 0.00000000000001171 84.0
DYD3_k127_6433514_0 Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits) K05365 - 2.4.1.129,3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003968 419.0
DYD3_k127_6433514_1 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 - 2.1.1.170 0.0000001996 53.0
DYD3_k127_6452426_0 extracellular matrix structural constituent - - - 0.0000000000007753 82.0
DYD3_k127_6455431_0 cellulase activity - - - 0.0000000000000000006858 100.0
DYD3_k127_6455431_1 PFAM NHL repeat containing protein - - - 0.00000000000001579 86.0
DYD3_k127_6455431_2 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.00000002336 66.0
DYD3_k127_6466897_0 conserved repeat domain protein - - - 0.0 1720.0
DYD3_k127_6466897_1 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000001496 197.0
DYD3_k127_6466897_2 LVIVD repeat K01179 - 3.2.1.4 0.0000000000007363 85.0
DYD3_k127_6478830_0 PhoQ Sensor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000472 253.0
DYD3_k127_6478830_1 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000001214 214.0
DYD3_k127_6478830_2 The glycine cleavage system catalyzes the degradation of glycine K00605,K06980,K22086 - 1.5.99.5,2.1.2.10 0.00000000000000000000000000000000000000001226 173.0
DYD3_k127_6478830_3 LytTr DNA-binding domain K02477 - - 0.00000000000002838 72.0
DYD3_k127_6478830_4 ABC 3 transport family K02075,K09816 - - 0.000000001674 60.0
DYD3_k127_648641_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003697 490.0
DYD3_k127_648641_1 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005187 314.0
DYD3_k127_648641_2 Histidine kinase K07675,K09684 - 2.7.13.3 0.000000000000000000000000000000000000000000006515 175.0
DYD3_k127_648641_3 SMART Tetratricopeptide domain protein - - - 0.000003737 59.0
DYD3_k127_648974_0 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001626 255.0
DYD3_k127_648974_1 Redoxin - - - 0.0000000000000000000000000000002466 125.0
DYD3_k127_648974_2 Metallo-beta-lactamase superfamily K01069 - 3.1.2.6 0.0000000000000000000000000000004865 125.0
DYD3_k127_648974_3 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000000000000000001304 112.0
DYD3_k127_648974_4 Redoxin - - - 0.0000000003442 63.0
DYD3_k127_6523028_0 Glycosyl transferases group 1 K00786 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003258 426.0
DYD3_k127_6523028_1 extracellular polysaccharide biosynthetic process K01153,K05789,K07011,K16554 - 3.1.21.3 0.00000000000000000000000000000000000004943 158.0
DYD3_k127_6545583_0 Staphylococcal nuclease homologues - - - 0.00000322 57.0
DYD3_k127_6549446_0 Protein involved in cellulose biosynthesis - - - 0.00000000000000000000000006639 120.0
DYD3_k127_6549446_1 Lipid kinase - - - 0.0000000000000000000000004707 121.0
DYD3_k127_6549446_2 EamA-like transporter family - - - 0.0000001146 59.0
DYD3_k127_6550906_0 FeS assembly ATPase SufC K09013 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005389 377.0
DYD3_k127_6550906_1 ABC-type transport system involved in Fe-S cluster assembly, permease component K09014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004081 336.0
DYD3_k127_6550906_2 FeS assembly protein SufD K07033,K09015 GO:0006790,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0031163,GO:0044085,GO:0044237,GO:0050896,GO:0051186,GO:0071840 - 0.00000000000000000000000000000000000003151 161.0
DYD3_k127_6559771_0 RNA polymerase sigma factor K03088 - - 0.0000000000000000000000000004673 124.0
DYD3_k127_6559771_1 - - - - 0.000000002275 67.0
DYD3_k127_6565677_0 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000006099 114.0
DYD3_k127_6574518_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823,K07250 - 2.6.1.19,2.6.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007698 511.0
DYD3_k127_6574518_1 ABC-type uncharacterized transport system K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000127 281.0
DYD3_k127_6574518_2 Domain of unknown function (DUF4340) - - - 0.0000000005407 72.0
DYD3_k127_6585748_0 uridine kinase K00876 - 2.7.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 430.0
DYD3_k127_6585748_1 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.000000000000000000000000000000000000000000000000000000000000000000000229 255.0
DYD3_k127_6585748_2 Radical SAM - - - 0.00000000000000000000000000003 130.0
DYD3_k127_6585748_3 Tetratricopeptide repeat - - - 0.0000000263 64.0
DYD3_k127_6594727_0 Outer membrane protein beta-barrel domain - - - 0.0000000001982 74.0
DYD3_k127_6594727_1 Surface antigen K07277 - - 0.0000001198 64.0
DYD3_k127_661820_0 Enoyl-CoA hydratase isomerase K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003136 569.0
DYD3_k127_661820_1 Thiolase, C-terminal domain K00626,K00632 - 2.3.1.16,2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004866 416.0
DYD3_k127_661820_2 exo-alpha-(2->6)-sialidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001756 307.0
DYD3_k127_661820_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002221 282.0
DYD3_k127_661820_4 Dna alkylation repair - - - 0.0000000000000000000000000000000000000000000000000000000000000002209 235.0
DYD3_k127_661820_5 Esterase of the alpha-beta hydrolase superfamily K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000006788 237.0
DYD3_k127_661820_6 Esterase K03928 - 3.1.1.1 0.00000000000000000000000000000000000000000371 168.0
DYD3_k127_661820_7 PDZ domain (Also known as DHR or GLGF) K08372 - - 0.000000000003158 72.0
DYD3_k127_661820_8 two component, sigma54 specific, transcriptional regulator, Fis family K07713 - - 0.0001354 53.0
DYD3_k127_6625008_0 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 6.426e-256 798.0
DYD3_k127_6629156_0 ABC transporter transmembrane K18889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003006 513.0
DYD3_k127_663260_0 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 366.0
DYD3_k127_663260_1 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.0000000000000000000000000000007313 123.0
DYD3_k127_6651742_0 Membrane - - - 0.00000000000000000000000000000006129 134.0
DYD3_k127_6651742_1 pyridoxamine 5-phosphate - - - 0.000007631 54.0
DYD3_k127_6651742_2 Protein of unknown function (DUF1579) - - - 0.00006572 54.0
DYD3_k127_6658253_0 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000327 450.0
DYD3_k127_6658253_1 Biotin-lipoyl like K02005 - - 0.0000000000005914 74.0
DYD3_k127_6658253_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.00009527 48.0
DYD3_k127_6664275_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 1.932e-206 651.0
DYD3_k127_6664275_1 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000009094 232.0
DYD3_k127_6664275_2 acetyltransferase - - - 0.0001189 52.0
DYD3_k127_6664275_3 TPR repeat - - - 0.0009201 45.0
DYD3_k127_666546_0 PFAM asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 528.0
DYD3_k127_666546_1 PFAM Methyltransferase type 11 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 310.0
DYD3_k127_666546_2 glycosyl transferase K20444 - - 0.000000000000000000000000000000000000001341 168.0
DYD3_k127_666546_3 Highly conserved protein containing a thioredoxin domain - - - 0.00000000000000000000005779 115.0
DYD3_k127_666546_4 COG0438 Glycosyltransferase - - - 0.000005709 57.0
DYD3_k127_6680305_0 methyltransferase K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002004 300.0
DYD3_k127_6693264_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002328 426.0
DYD3_k127_6693264_1 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002684 360.0
DYD3_k127_6693264_2 TIGRFAM N-terminal double-transmembrane domain - - - 0.00000000000000000000000000000000000000000000001306 194.0
DYD3_k127_6693264_3 Belongs to the short-chain dehydrogenases reductases (SDR) family K00059,K07124 - 1.1.1.100 0.0000000000000000000000000000000000000000000009377 175.0
DYD3_k127_6693264_4 Polymer-forming cytoskeletal - - - 0.0000000000000000000776 96.0
DYD3_k127_6693264_5 Protein of unknown function (DUF1573) - - - 0.0002007 54.0
DYD3_k127_6697162_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 3.206e-203 652.0
DYD3_k127_6697162_1 DHH family K06881 - 3.1.13.3,3.1.3.7 0.000000000000000000000000000000000000000000000000000000005991 215.0
DYD3_k127_6697162_2 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000000000006567 94.0
DYD3_k127_6697162_3 Protein of unknown function (DUF503) K09764 - - 0.000000000000000001362 88.0
DYD3_k127_6697162_4 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.000000000001523 69.0
DYD3_k127_6706197_0 Phosphoglycerate mutase family K01834 - 5.4.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 379.0
DYD3_k127_6706197_1 Provides the (R)-glutamate required for cell wall biosynthesis K01776 GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008881,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016853,GO:0016854,GO:0016855,GO:0030203,GO:0034645,GO:0036361,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0047661,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 5.1.1.3 0.00000000000000000000000000000000000000000000000000000000000006239 227.0
DYD3_k127_6706197_2 phosphatase K01090,K20074 - 3.1.3.16 0.00000000000000000000000000000000000009387 153.0
DYD3_k127_6706197_3 Family 5 K02035,K15580 - - 0.000000000000000000000002391 118.0
DYD3_k127_6706197_4 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.000000000008022 70.0
DYD3_k127_6715797_0 protein catabolic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 527.0
DYD3_k127_6715797_1 PFAM Tetratricopeptide - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002829 294.0
DYD3_k127_6721822_0 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000001242 173.0
DYD3_k127_6721822_1 TIGRFAM TIGR00725 family protein K06966 - 3.2.2.10 0.000000000000000000000000000000003134 136.0
DYD3_k127_6721822_2 IMP dehydrogenase activity - - - 0.0000000000000000000000000000405 124.0
DYD3_k127_6721822_3 - - - - 0.0000000006707 69.0
DYD3_k127_6721822_4 - - - - 0.000000000905 71.0
DYD3_k127_6721822_5 PFAM AsmA family protein K07289 - - 0.000008071 55.0
DYD3_k127_6735137_0 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01835 - 5.4.2.2 1.848e-208 683.0
DYD3_k127_6735137_1 GDSL-like Lipase/Acylhydrolase family - - - 0.0000000000000000000000000000000000000000000000001198 192.0
DYD3_k127_6735137_2 Histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000001113 169.0
DYD3_k127_6735137_3 - - - - 0.0000000000006476 83.0
DYD3_k127_6735137_4 LVIVD repeat K01179 - 3.2.1.4 0.000000002488 62.0
DYD3_k127_6735137_5 GDSL-like Lipase/Acylhydrolase family - - - 0.000000193 63.0
DYD3_k127_6735913_0 membrane - - - 0.000000000000000000000000000003496 130.0
DYD3_k127_6735913_1 Could be involved in septation K06412 - - 0.00000000000000000004591 95.0
DYD3_k127_6735913_2 oligosaccharyl transferase activity - - - 0.0000002954 61.0
DYD3_k127_6745229_0 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0019509,GO:0019752,GO:0043094,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046523,GO:0071265,GO:0071267,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003956 331.0
DYD3_k127_6745229_1 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006478 277.0
DYD3_k127_6745229_2 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001505 255.0
DYD3_k127_6745229_3 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000001321 169.0
DYD3_k127_6745229_4 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000000000000000000000000000000000000000001076 180.0
DYD3_k127_6745229_5 - - - - 0.0000000000000000000000000000000000000002415 163.0
DYD3_k127_6745229_6 Belongs to the universal ribosomal protein uS9 family K02996 GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000003564 152.0
DYD3_k127_6745229_7 Maf-like protein K06287 GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0005575,GO:0005623,GO:0007049,GO:0008150,GO:0009987,GO:0016043,GO:0022402,GO:0022607,GO:0030428,GO:0032506,GO:0044085,GO:0044464,GO:0051301,GO:0061640,GO:0071840,GO:0090529,GO:1902410,GO:1903047 - 0.000000000000000000000000000000000000002803 154.0
DYD3_k127_6745229_8 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.0000000000000000000007058 97.0
DYD3_k127_6747146_0 ABC transporter transmembrane region K11085 - - 3.962e-239 755.0
DYD3_k127_6747146_1 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007917 566.0
DYD3_k127_6747146_2 Acyl-CoA dehydrogenase, C-terminal domain K00248 - 1.3.8.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000359 505.0
DYD3_k127_6747146_3 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007002 318.0
DYD3_k127_6747146_4 PFAM Endonuclease Exonuclease phosphatase K07004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005124 275.0
DYD3_k127_6752845_1 TonB-dependent receptor - - - 3.555e-231 745.0
DYD3_k127_6752845_2 cellulose binding K00505 - 1.14.18.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000261 430.0
DYD3_k127_6752845_3 long-chain fatty acid transporting porin activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001807 289.0
DYD3_k127_6752845_4 protein conserved in bacteria - - - 0.00000000000000000000000000000000004871 139.0
DYD3_k127_6752845_5 LacI family K02529 - - 0.00000000000000000000000000002271 123.0
DYD3_k127_6760692_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008852 296.0
DYD3_k127_6760692_1 UbiA prenyltransferase family K03179,K17105 - 2.5.1.39,2.5.1.42 0.0000000000000000000000000000000007443 141.0
DYD3_k127_6768941_0 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 470.0
DYD3_k127_6768941_1 Belongs to the DegT DnrJ EryC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000153 403.0
DYD3_k127_6768941_2 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000006332 239.0
DYD3_k127_6768941_3 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 - 4.6.1.12 0.0000000000000000000000000000000000000000000000006352 189.0
DYD3_k127_6768941_4 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.000000000000000000000000000000000000000000000001613 183.0
DYD3_k127_6768941_5 Diguanylate cyclase K21084 - 2.7.7.65 0.00000000000000000000000000000000000000000000002163 191.0
DYD3_k127_6768941_6 ATP hydrolysis coupled proton transport - - - 0.0000000000000000000000000000006725 141.0
DYD3_k127_6768941_7 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000001433 123.0
DYD3_k127_6768941_8 Evidence 5 No homology to any previously reported sequences - - - 0.0000000000000002468 95.0
DYD3_k127_6768941_9 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.0000004408 51.0
DYD3_k127_679163_0 isocitrate lyase activity K01637 GO:0001101,GO:0001666,GO:0003674,GO:0003824,GO:0004451,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0006081,GO:0006082,GO:0006097,GO:0006102,GO:0006950,GO:0008150,GO:0008152,GO:0009268,GO:0009405,GO:0009605,GO:0009607,GO:0009628,GO:0009987,GO:0010033,GO:0010034,GO:0010447,GO:0016020,GO:0016829,GO:0016830,GO:0016833,GO:0019752,GO:0019899,GO:0032787,GO:0033554,GO:0033993,GO:0035375,GO:0036293,GO:0036294,GO:0042221,GO:0043167,GO:0043169,GO:0043207,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046421,GO:0046487,GO:0046677,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0070482,GO:0070542,GO:0070887,GO:0071453,GO:0071456,GO:0071704,GO:0071944,GO:0072350,GO:0075136,GO:0075141,GO:1901700 4.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008675 610.0
DYD3_k127_679163_1 Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA K01638 GO:0003674,GO:0003824,GO:0004474,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006081,GO:0006082,GO:0006097,GO:0008150,GO:0008152,GO:0009987,GO:0016740,GO:0016746,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044424,GO:0044464,GO:0046487,GO:0046912,GO:0071704 2.3.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006182 349.0
DYD3_k127_6791825_0 - - - - 0.000000000000002676 88.0
DYD3_k127_6791825_1 Belongs to the peptidase S8 family - - - 0.00006458 56.0
DYD3_k127_6810215_0 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 629.0
DYD3_k127_6810215_1 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K04127,K11325,K21174 - 5.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004331 501.0
DYD3_k127_6810215_2 Belongs to the LarC family K09121 - 4.99.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009352 328.0
DYD3_k127_6810215_3 ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates K16786,K16787 - - 0.00000000000000000000000000000000000000000000000000001109 201.0
DYD3_k127_6810215_4 ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates K16787 - - 0.00000000000000000000000000000000000000002513 166.0
DYD3_k127_6810215_5 Copper type II ascorbate-dependent monooxygenase, C-terminal domain - - - 0.0000000000000000000000000009868 117.0
DYD3_k127_6810215_6 Transposase, Mutator family - - - 0.00000000000000002297 83.0
DYD3_k127_6810215_7 Tetratricopeptide repeat - - - 0.0000004624 60.0
DYD3_k127_6814234_0 choline dehydrogenase activity - - - 1.398e-230 744.0
DYD3_k127_6814234_1 Dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 464.0
DYD3_k127_6814234_2 alcohol dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001982 301.0
DYD3_k127_6814234_3 - - - - 0.000000000000000000000000000000000000000000000000000001063 202.0
DYD3_k127_6814234_4 Electron transfer DM13 - - - 0.000000000000000000000006899 112.0
DYD3_k127_6823209_0 Evidence 5 No homology to any previously reported sequences K17713 - - 0.000000000000000000000000000000001675 145.0
DYD3_k127_6823209_1 Two component regulator propeller - - - 0.0000000000000000000000000000000703 143.0
DYD3_k127_6823209_2 Propeptide_C25 - - - 0.000000000000000001266 94.0
DYD3_k127_6851631_0 Heat shock 70 kDa protein K04043 - - 4.595e-262 818.0
DYD3_k127_6851631_1 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.00000000000000000000000000000000000000000000000004059 192.0
DYD3_k127_6851631_2 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.00000000000000000000000000000254 128.0
DYD3_k127_6851631_3 Involved in the biosynthesis of porphyrin-containing compound - - - 0.00000000000000000000000331 111.0
DYD3_k127_6856482_0 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003998 325.0
DYD3_k127_6856482_1 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003583 290.0
DYD3_k127_6856482_2 Deoxynucleoside kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000058 243.0
DYD3_k127_6856482_3 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.00000000000000000000000000000000000000000000000000000000000000000009375 252.0
DYD3_k127_6856482_4 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950,K13940 - 2.7.6.3,4.1.2.25 0.000000000000000000000001083 110.0
DYD3_k127_6856482_5 bis(5'-adenosyl)-triphosphatase activity K19710 GO:0003674,GO:0003824,GO:0003877,GO:0004551,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008796,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009987,GO:0015959,GO:0015961,GO:0015965,GO:0015967,GO:0016020,GO:0016462,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0040007,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0070566,GO:0071704,GO:0071944,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 2.7.7.53 0.0000000006226 62.0
DYD3_k127_6856482_6 Peptidase, S9A B C family, catalytic domain protein - - - 0.0009261 51.0
DYD3_k127_6875128_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006195 569.0
DYD3_k127_6875128_1 Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na( ) movement across the membrane K15987 - 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004572 487.0
DYD3_k127_6875128_2 Homocysteine S-methyltransferase K00297,K00547 - 1.5.1.20,2.1.1.10 0.0000000000000000000000000000000000000000001697 172.0
DYD3_k127_6875128_3 HAD-hyrolase-like K01091 - 3.1.3.18 0.000000000000000000000000000000002757 137.0
DYD3_k127_6875128_4 FR47-like protein - - - 0.0000000000000378 81.0
DYD3_k127_6875128_5 - - - - 0.00000000002553 76.0
DYD3_k127_6882877_0 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000852 371.0
DYD3_k127_6886665_0 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 311.0
DYD3_k127_6886665_1 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000001528 207.0
DYD3_k127_6886665_2 Nicotinamidase K08281 - 3.5.1.19 0.00000000000000000000000000000000000000000000002081 177.0
DYD3_k127_6886792_0 domain protein K13735 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006756 308.0
DYD3_k127_6886792_1 Putative beta-lactamase-inhibitor-like, PepSY-like - - - 0.00000000000000000000002339 109.0
DYD3_k127_6886792_2 phosphatidate phosphatase activity K01096,K19302 - 3.1.3.27,3.1.3.4,3.1.3.81,3.6.1.27 0.0000000000006435 79.0
DYD3_k127_6886792_3 cellulase activity - - - 0.00000000001606 77.0
DYD3_k127_6888599_0 PFAM DNA mismatch repair protein MutS domain protein - - - 0.00000000000000000000000000000000000000000000000000000922 213.0
DYD3_k127_6895283_0 Phenylacetate-CoA oxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002381 261.0
DYD3_k127_6895283_1 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides - - - 0.0000000000000000000000757 110.0
DYD3_k127_6895283_2 Right handed beta helix region - - - 0.00003585 57.0
DYD3_k127_6929327_0 6-phosphofructokinase activity K00850,K00895,K21071 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005975,GO:0006002,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008443,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019200,GO:0019637,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044262,GO:0046835,GO:0046872,GO:0047334,GO:0071704,GO:1901135 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 571.0
DYD3_k127_6929327_1 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002605 347.0
DYD3_k127_6929327_2 Protein of unknown function (DUF455) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004027 341.0
DYD3_k127_6929327_3 Rossmann-like domain K06988 - 1.5.1.40 0.0000000000000000000000000000000000000838 145.0
DYD3_k127_6929327_4 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) - - - 0.000000000000000000001525 109.0
DYD3_k127_6933302_0 Domain of unknown function (DUF5117) - - - 6.833e-272 866.0
DYD3_k127_6937914_0 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 396.0
DYD3_k127_6937914_1 PFAM response regulator receiver K07665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006577 257.0
DYD3_k127_6937914_2 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000007917 249.0
DYD3_k127_6937914_3 response regulator K02485 - - 0.0000000000000000000000000000000000000000598 156.0
DYD3_k127_6937914_4 Domain of unknown function (DUF4154) - - - 0.00000000000000000000000000000000000003308 149.0
DYD3_k127_6937914_5 Parallel beta-helix repeats - - - 0.00000000000000000002129 100.0
DYD3_k127_6971032_0 ATPases associated with a variety of cellular activities K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004723 304.0
DYD3_k127_6971032_1 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002502 272.0
DYD3_k127_6971032_2 NmrA-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001709 259.0
DYD3_k127_6971032_3 FR47-like protein - - - 0.000000000000000000000000000000000000000002219 167.0
DYD3_k127_6971032_4 ECF sigma factor - - - 0.00000000000000000000000000000000000001122 150.0
DYD3_k127_6971032_5 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000002677 141.0
DYD3_k127_6971032_6 PFAM ABC-2 type transporter K01992 - - 0.00000000003496 75.0
DYD3_k127_6971032_7 AntiSigma factor - - - 0.0001796 50.0
DYD3_k127_6995785_0 Catalyzes the attachment of glycine to tRNA(Gly) K01880 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006426,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009345,GO:0009987,GO:0010467,GO:0016070,GO:0016594,GO:0016597,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0031406,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0042165,GO:0042802,GO:0042803,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046983,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.14 4.924e-200 647.0
DYD3_k127_6995785_1 PFAM TonB-dependent Receptor Plug - - - 0.000000000000009922 86.0
DYD3_k127_6995785_2 Histidine kinase - - - 0.00000000001186 75.0
DYD3_k127_7007676_0 Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import. Responsible for energy coupling to the transport system K05816 - 3.6.3.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009695 346.0
DYD3_k127_7007676_1 Putative glucoamylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002054 286.0
DYD3_k127_7007676_2 WD40 domain protein beta Propeller K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000009699 269.0
DYD3_k127_7007676_3 Helix-hairpin-helix class 2 (Pol1 family) motifs - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004609 247.0
DYD3_k127_7011098_0 Peptidase family C25 - - - 0.0000000000000000000000000000000000000000008719 179.0
DYD3_k127_7027468_0 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003013 320.0
DYD3_k127_7027468_1 Protein of unknown function (DUF819) - - - 0.0000000000000000000000000000000000000000000000000000003516 208.0
DYD3_k127_7047480_0 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.00000000000000000000000000000000000000000000001199 187.0
DYD3_k127_7047480_1 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000000000000000003287 144.0
DYD3_k127_7047480_2 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000185 115.0
DYD3_k127_7057503_0 Belongs to the aldehyde dehydrogenase family K00128,K00138 - 1.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006867 529.0
DYD3_k127_7057503_1 Protein kinase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003779 382.0
DYD3_k127_7057503_2 Zinc-binding dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000223 382.0
DYD3_k127_7057503_3 TGS domain K06944 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005917 326.0
DYD3_k127_7057503_4 amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006443 285.0
DYD3_k127_7057503_5 Purple acid Phosphatase, N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000724 234.0
DYD3_k127_7057503_6 extracellular matrix structural constituent - - - 0.000000000002458 80.0
DYD3_k127_7065644_0 Polysulphide reductase, NrfD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 446.0
DYD3_k127_7065644_1 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001531 308.0
DYD3_k127_7065644_2 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.000000000001892 78.0
DYD3_k127_7065644_3 glycine decarboxylation via glycine cleavage system K02437 - - 0.000003068 51.0
DYD3_k127_7091889_0 Belongs to the peptidase S8 family - - - 0.000102 55.0
DYD3_k127_7104468_0 PFAM transposase, IS4 family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004368 538.0
DYD3_k127_7104468_1 PFAM transposase IS4 family protein - - - 0.00000000000000000000000000000006961 127.0
DYD3_k127_7109036_0 Peptidase family C25 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003773 330.0
DYD3_k127_7111300_0 CobW/HypB/UreG, nucleotide-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002068 430.0
DYD3_k127_7111300_1 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002403 385.0
DYD3_k127_7111300_2 Calcineurin-like phosphoesterase K07099 - - 0.0000000000000000000000000001717 118.0
DYD3_k127_7113640_0 major pilin protein fima - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002824 407.0
DYD3_k127_7113640_1 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003873 270.0
DYD3_k127_7126639_0 Biotin carboxylase C-terminal domain K01961 - 6.3.4.14,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 512.0
DYD3_k127_7126639_1 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003274 496.0
DYD3_k127_7133563_0 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00207,K12527,K17723 - 1.3.1.1,1.3.1.2,1.97.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003885 581.0
DYD3_k127_7133563_1 FG-GAP repeat protein - - - 0.00007837 54.0
DYD3_k127_717168_0 VanZ like family - - - 0.0000000000000000000003816 110.0
DYD3_k127_717168_1 Protein conserved in bacteria K09931 - - 0.000000000000000000001783 108.0
DYD3_k127_717168_2 Polysaccharide export protein K01991 - - 0.000001617 57.0
DYD3_k127_717168_3 Psort location CytoplasmicMembrane, score 10.00 - - - 0.00007796 47.0
DYD3_k127_7172201_0 cAMP biosynthetic process K08282,K12132 - 2.7.11.1 2.025e-273 861.0
DYD3_k127_7172201_1 - - - - 0.000000000000000000000000000000000000000005263 162.0
DYD3_k127_7172201_2 lactoylglutathione lyase activity - - - 0.0000000000000000000000000000000000000008662 153.0
DYD3_k127_7204864_0 COG0534 Na -driven multidrug efflux pump K03327 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001357 349.0
DYD3_k127_7204864_1 Catalyzes the 2'-O methylation of guanosine at position 18 in tRNA K00556 - 2.1.1.34 0.0000000000001062 75.0
DYD3_k127_7208785_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006325 355.0
DYD3_k127_7209752_0 Ferric uptake regulator family K09825 - - 0.0000000000000000000000000004501 117.0
DYD3_k127_7209752_1 Putative adhesin - - - 0.00000000005502 74.0
DYD3_k127_7209752_2 Belongs to the Dps family K04047 - - 0.000000003183 64.0
DYD3_k127_72668_0 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K00371,K16965,K17048,K17051 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.7.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 594.0
DYD3_k127_72668_1 Molybdopterin oxidoreductase - - - 0.00000000000000000000000000000000000000000000000001107 182.0
DYD3_k127_72668_2 Nitrate reductase delta subunit - - - 0.000000000000000000002211 110.0
DYD3_k127_72668_3 - - - - 0.0000000293 67.0
DYD3_k127_740018_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 1.254e-256 811.0
DYD3_k127_740018_1 Alanine dehydrogenase/PNT, N-terminal domain K00290,K14157 - 1.5.1.7,1.5.1.8,1.5.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 432.0
DYD3_k127_740018_2 Alanine dehydrogenase/PNT, N-terminal domain K00290,K14157 - 1.5.1.7,1.5.1.8,1.5.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003833 394.0
DYD3_k127_740018_3 PFAM aldo keto reductase - - - 0.0000000000000000000000000000000000000008693 152.0
DYD3_k127_75018_0 UbiA prenyltransferase family K03179,K04040 - 2.5.1.133,2.5.1.39,2.5.1.62 0.00000000000000000002499 98.0
DYD3_k127_75018_1 Domain of unknown function (DUF4388) - - - 0.00000000000000002151 94.0
DYD3_k127_75018_2 peptidyl-tyrosine sulfation - - - 0.000000000001557 81.0
DYD3_k127_76075_0 Citrate synthase, C-terminal domain K01647 - 2.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003344 383.0
DYD3_k127_76075_1 peptidase K01303 - 3.4.19.1 0.0000000000000000000000000000000000000000000000000000000000000000000000005711 263.0
DYD3_k127_76075_2 Protein of unknown function (DUF971) - - - 0.000000000000000000000000001203 115.0
DYD3_k127_76075_3 COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) - - - 0.0000000000008281 81.0
DYD3_k127_76075_4 Glutamine amidotransferases class-II - - - 0.0000006494 63.0
DYD3_k127_76137_0 Belongs to the glycosyl hydrolase 57 family K16149 - 2.4.1.18 1.574e-216 690.0
DYD3_k127_76137_1 Belongs to the glycosyl hydrolase 57 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006968 581.0
DYD3_k127_76137_2 Domain of unknown function (DUF4912) K09942 - - 0.00000000000000000000000000000002176 132.0
DYD3_k127_76137_3 Subtilase family K08651 - 3.4.21.66 0.00000006845 58.0
DYD3_k127_769701_0 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 0.00000000000000131 76.0
DYD3_k127_769701_1 TIGRFAM general secretion pathway protein H K08084 - - 0.0000000004234 72.0
DYD3_k127_782677_0 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01840,K15778 - 5.4.2.2,5.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004564 473.0
DYD3_k127_782677_1 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002904 359.0
DYD3_k127_782677_2 Cytidine monophosphokinase K00876 GO:0003674,GO:0003824,GO:0004849,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009224,GO:0009259,GO:0009260,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043094,GO:0043097,GO:0043174,GO:0043771,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046035,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.7.1.48 0.000000000000000000000000000000000000000000000000000000000000000005506 231.0
DYD3_k127_782677_3 UbiA prenyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000004321 228.0
DYD3_k127_794867_0 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005881 466.0
DYD3_k127_794867_1 Glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.00000000000000000000000000000006044 130.0
DYD3_k127_80071_0 COGs COG1022 Long-chain acyl-CoA synthetase (AMP-forming) K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004008 516.0
DYD3_k127_80071_1 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.00000000000000005165 84.0
DYD3_k127_815619_0 Sigma-54 dependent transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000002092 250.0
DYD3_k127_815619_1 Family membership K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000001594 170.0
DYD3_k127_815965_0 Pyridoxal-dependent decarboxylase conserved domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005403 500.0
DYD3_k127_815965_1 H( )-stimulated, divalent metal cation uptake system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001442 354.0
DYD3_k127_826923_0 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008186 490.0
DYD3_k127_826923_1 TonB-dependent receptor - - - 0.0000000000000000000001358 106.0
DYD3_k127_840073_0 Bacterial extracellular solute-binding protein, family 7 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001653 381.0
DYD3_k127_840073_1 OPT oligopeptide transporter protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000125 259.0
DYD3_k127_851626_0 Catalytic LigB subunit of aromatic ring-opening dioxygenase K15058 - - 0.0000000000000000000000000000000000000000000000843 190.0
DYD3_k127_851626_1 Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation K07130 GO:0003674,GO:0003824,GO:0004061,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019439,GO:0019441,GO:0019752,GO:0032787,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043420,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0070189,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 3.5.1.9 0.000000000000000000000000000000000000000000001507 179.0
DYD3_k127_851626_2 3-carboxyethylcatechol 2,3-dioxygenase activity K00455,K15058,K15059 - 1.13.11.15,1.13.11.74,1.13.11.76 0.0000000000000000000000000000000000000004354 169.0
DYD3_k127_851626_3 translation initiation inhibitor, yjgF family K15067 - 3.5.99.5 0.000000000000000000000000000000000000002472 167.0
DYD3_k127_851626_4 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0000000000000000002814 103.0
DYD3_k127_868802_0 GYD domain - - - 0.000000000006159 71.0
DYD3_k127_868802_1 Major Facilitator Superfamily - - - 0.0001384 54.0
DYD3_k127_868802_2 - - - - 0.0008049 50.0
DYD3_k127_880956_0 response regulator K13599 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000991 441.0
DYD3_k127_880956_1 peptidyl-tyrosine sulfation - - - 0.00000000007092 76.0
DYD3_k127_880956_2 - - - - 0.0000002278 61.0
DYD3_k127_880956_3 Alpha amylase, catalytic domain K01208 - 3.2.1.133,3.2.1.135,3.2.1.54 0.000004268 59.0
DYD3_k127_884563_0 Peptidase m28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002682 508.0
DYD3_k127_884563_1 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003357 375.0
DYD3_k127_885483_0 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000049 443.0
DYD3_k127_885483_1 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source K01916 - 6.3.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007507 357.0
DYD3_k127_885483_2 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002254 264.0
DYD3_k127_885483_3 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.0000000000000000000000000000000000007329 147.0
DYD3_k127_885483_4 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530,K05788 - - 0.000000000000000000000000001094 115.0
DYD3_k127_885483_5 CBS domain - - - 0.000000000000000004986 92.0
DYD3_k127_892714_0 Domains REC, sigma54 interaction, HTH8 - - - 0.0000000000000000000000000000000000000000000000000000000000001071 218.0
DYD3_k127_892714_1 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000001657 204.0
DYD3_k127_892714_2 4Fe-4S dicluster domain K00184 - - 0.0000000000000000000000000000000000000000000001333 182.0
DYD3_k127_907138_0 Vitamin B12 dependent methionine synthase, activation K00548 - 2.1.1.13 0.0 1024.0
DYD3_k127_907138_1 PFAM Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.000006324 55.0
DYD3_k127_917415_0 SMART Peptidoglycan-binding Lysin subgroup K16291 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003645 348.0
DYD3_k127_917415_1 Phage tail sheath protein K06907 - - 0.000000000000000000000000000001067 132.0
DYD3_k127_932575_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004352 352.0
DYD3_k127_932575_1 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533,K15396 - 2.1.1.200 0.0000000007082 63.0
DYD3_k127_948830_0 beta-ketoacyl-acyl-carrier-protein synthase III activity K00648 GO:0003674,GO:0003824,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009987,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0033818,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0071704 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 442.0
DYD3_k127_948830_1 Insulinase (Peptidase family M16) K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004185 436.0
DYD3_k127_948830_2 PFAM peptidase M16 domain protein K00960,K07263 - 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002746 361.0
DYD3_k127_948830_3 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022 331.0
DYD3_k127_948830_4 Transport permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000009328 239.0
DYD3_k127_948830_5 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.00000000000000000000000000000000000000000000000003628 183.0
DYD3_k127_948830_6 Protein of unknown function (DUF420) K08976 - - 0.000000000000000000000000000000000000009272 150.0
DYD3_k127_948830_7 protein SCO1 SenC K07152 - - 0.0000000000000000000000000000000003124 148.0
DYD3_k127_960877_0 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.00000000000000000000000000000000000000000000000000000000000008012 224.0
DYD3_k127_960877_1 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000000000000000009522 114.0
DYD3_k127_960877_3 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.00002242 48.0
DYD3_k127_964525_0 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K20810 - 3.5.4.40 0.000000000000000000000000000000000000000000000000004077 192.0
DYD3_k127_964525_1 Lamin Tail Domain - - - 0.00000000000000000000000001379 120.0
DYD3_k127_965717_0 PFAM HNH endonuclease - - - 0.00000000000000000000000000000000000000000000000354 181.0
DYD3_k127_965717_1 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.00000000000000000000000000000000000009827 160.0
DYD3_k127_975407_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 1.57e-285 899.0
DYD3_k127_975407_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001951 507.0
DYD3_k127_975407_2 Belongs to the aspartate glutamate racemases family K01779 - 5.1.1.13 0.00000000000000000000000000000000000000000000000000000000000000001189 232.0
DYD3_k127_97639_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000002761 82.0
DYD3_k127_979370_0 FAD dependent oxidoreductase K09879 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 353.0
DYD3_k127_979370_1 FAD dependent oxidoreductase K09879 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007906 274.0
DYD3_k127_979370_2 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K19802 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016854,GO:0034641,GO:0043167,GO:0043169,GO:0043603,GO:0044237,GO:0046872,GO:0071704,GO:1901564 5.1.1.20 0.0000000000000000000000000000000000000000000001382 175.0
DYD3_k127_985505_0 MoaE protein K21142 - 2.8.1.12 0.0000000000000000000000000000000004169 136.0
DYD3_k127_985505_1 NfeD-like C-terminal, partner-binding K07403 - - 0.00000000000000000000000000000003915 131.0
DYD3_k127_985505_2 Tetratricopeptide repeat protein - - - 0.000000000000000000000000001761 130.0
DYD3_k127_985505_3 Acts as a sulfur carrier required for molybdopterin biosynthesis. Component of the molybdopterin synthase complex that catalyzes the conversion of precursor Z into molybdopterin by mediating the incorporation of 2 sulfur atoms into precursor Z to generate a dithiolene group. In the complex, serves as sulfur donor by being thiocarboxylated (-COSH) at its C-terminus by MOCS3. After interaction with MOCS2B, the sulfur is then transferred to precursor Z to form molybdopterin K03635,K21232 GO:0006464,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009719,GO:0009725,GO:0009733,GO:0009734,GO:0009755,GO:0009987,GO:0010033,GO:0018315,GO:0019538,GO:0023052,GO:0032870,GO:0036211,GO:0042040,GO:0042221,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0070887,GO:0071310,GO:0071365,GO:0071495,GO:0071704,GO:1901564 2.8.1.12 0.00000000002922 67.0
DYD3_k127_990688_0 Cytochrome c7 and related cytochrome c - - - 0.000000000000000000000000000000001216 145.0
DYD3_k127_990688_1 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.0000000000005002 79.0
DYD3_k127_99188_0 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.00000000000000000000000000000000000000000000000000005435 199.0
DYD3_k127_99188_1 Belongs to the peptidase S16 family K04076 - 3.4.21.53 0.0000000000000000000000000000004811 127.0
DYD3_k127_999970_0 Belongs to the RtcB family K14415 - 6.5.1.3 9.16e-199 630.0
DYD3_k127_999970_1 RimK-like ATPgrasp N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001309 571.0
DYD3_k127_999970_10 COG1525 Micrococcal nuclease (thermonuclease) homologs K01174 - 3.1.31.1 0.000000003109 69.0
DYD3_k127_999970_2 Glutamate-cysteine ligase family 2(GCS2) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002565 482.0
DYD3_k127_999970_3 ATP-grasp domain - - - 0.00000000000000000000000000000000000000000000000000000000026 213.0
DYD3_k127_999970_4 DsrE/DsrF-like family - - - 0.00000000000000000000000000000000000000000000000000001629 191.0
DYD3_k127_999970_5 DsrE/DsrF-like family - - - 0.00000000000000000000000000000000000000000000001466 173.0
DYD3_k127_999970_6 spore germination K07790 - - 0.000000000000000000000000000000000000000001516 171.0
DYD3_k127_999970_7 DoxX K15977 - - 0.0000000000000000000000000000001431 130.0
DYD3_k127_999970_8 Archease protein family (MTH1598/TM1083) - - - 0.0000000000000000000001718 102.0
DYD3_k127_999970_9 DsrE/DsrF-like family - - - 0.00000000000000000005496 96.0