logo

Overview

ID MAG00993
Name DYD3_bin.76
Sample SMP0027
Taxonomy
Kingdom Bacteria
Phylum Gemmatimonadota
Class Gemmatimonadetes
Order Gemmatimonadales
Family GWC2-71-9
Genus JAICEH01
Species
Assembly information
Completeness (%) 81.31
Contamination (%) 1.95
GC content (%) 74.0
N50 (bp) 6,151
Genome size (bp) 2,670,391

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2501

Gene name Description KEGG GOs EC E-value Score Sequence
DYD3_k127_10019_0 HELICc2 K03722 - 3.6.4.12 1.805e-251 796.0
DYD3_k127_10019_1 Transglutaminase-like superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000102 243.0
DYD3_k127_1002118_0 pyridoxal-dependent decarboxylase K01580 - 4.1.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002101 355.0
DYD3_k127_1002118_1 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567 - 2.1.1.63 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005744 320.0
DYD3_k127_1002118_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001716 245.0
DYD3_k127_1002118_3 TrkA-C domain K03455 - - 0.00000000000000000000000000000000005784 139.0
DYD3_k127_1002118_4 Sigma-70 region 2 K03088 - - 0.0000000000000000001926 96.0
DYD3_k127_1002118_5 Type III secretion system lipoprotein chaperone (YscW) K08985,K09914 - - 0.0000000000000000002023 93.0
DYD3_k127_1002118_6 transport - - - 0.00000000002654 77.0
DYD3_k127_1021354_0 WD40-like Beta Propeller Repeat K03641,K07277 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201 466.0
DYD3_k127_1021354_1 Sodium/hydrogen exchanger family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006747 346.0
DYD3_k127_1021354_2 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000003631 169.0
DYD3_k127_1021354_3 Lipopolysaccharide-assembly - - - 0.00005449 52.0
DYD3_k127_1021354_4 - - - - 0.00006235 53.0
DYD3_k127_1055831_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004666 375.0
DYD3_k127_1055831_1 TIGRFAM malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007303 321.0
DYD3_k127_1055831_2 Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000001447 180.0
DYD3_k127_1055831_3 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.00000000000000000000000000000002457 129.0
DYD3_k127_1060016_0 Alcohol dehydrogenase GroES-like domain - - - 0.0000000000000000000000000000000000001413 150.0
DYD3_k127_1072840_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005888 412.0
DYD3_k127_1072840_1 Beta-lactamase superfamily domain K00784 - 3.1.26.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 401.0
DYD3_k127_1072840_2 PFAM bifunctional deaminase-reductase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001758 261.0
DYD3_k127_1072840_3 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000002363 150.0
DYD3_k127_1072840_4 glutamine synthetase K01915 - 6.3.1.2 0.00000000000000000002869 106.0
DYD3_k127_1072840_5 translation initiation factor activity K06996 - - 0.0002845 49.0
DYD3_k127_1073615_0 Domain of unknown function (DUF5118) - - - 3.432e-299 939.0
DYD3_k127_1073615_1 esterase of the alpha-beta hydrolase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000795 376.0
DYD3_k127_1073615_2 anion-transporting ATPase - - - 0.0000000000000000000000000000000000000000000000000000000003514 216.0
DYD3_k127_1073615_3 CobQ/CobB/MinD/ParA nucleotide binding domain - - - 0.000000000000000000000000000006307 133.0
DYD3_k127_1073615_4 DinB family - - - 0.0000000000000000000000000001121 119.0
DYD3_k127_1073615_5 Regulates arginine biosynthesis genes K03402 - - 0.0000000000000000000000001689 115.0
DYD3_k127_1073615_6 PHB/PHA accumulation regulator DNA-binding domain - - - 0.00000000000000001875 93.0
DYD3_k127_1073615_7 Poly(hydroxyalcanoate) granule associated protein (phasin) - - - 0.0000000001653 69.0
DYD3_k127_108295_0 C-terminal domain of alpha-glycerophosphate oxidase K00111 - 1.1.5.3 0.000000000000000000000000000000000000000000000000000000000000000000002822 243.0
DYD3_k127_108295_1 Tellurite resistance protein TehB - - - 0.0000000000000000000000006141 113.0
DYD3_k127_108295_2 Thiolase, C-terminal domain K00632 - 2.3.1.16 0.00000000000000001249 85.0
DYD3_k127_1097263_0 AMP-binding enzyme C-terminal domain K00666 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001531 563.0
DYD3_k127_1097263_1 OST-HTH/LOTUS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006757 374.0
DYD3_k127_1101426_0 peptidyl-lysine modification to peptidyl-hypusine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 387.0
DYD3_k127_1101426_1 Protein of unknown function (DUF3108) - - - 0.00000000000000000000000000000000000000004745 161.0
DYD3_k127_1101426_2 FAD dependent oxidoreductase K03153 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016491,GO:0016638,GO:0016641,GO:0019752,GO:0022607,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043799,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044281,GO:0048037,GO:0050660,GO:0050662,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0071949,GO:0097159,GO:1901265,GO:1901363,GO:1901564 1.4.3.19 0.000000000000002221 85.0
DYD3_k127_1101426_3 - - - - 0.0002799 46.0
DYD3_k127_1105714_0 Magnesium chelatase, subunit ChlI C-terminal K07391 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002116 584.0
DYD3_k127_1105714_1 Catalyzes the hydrolytic cleavage of a subset of L- isoaspartyl (L-beta-aspartyl) dipeptides. Used to degrade proteins damaged by L-isoaspartyl residues formation K01305 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008242,GO:0008270,GO:0008798,GO:0016787,GO:0019538,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0070011,GO:0071704,GO:0140096,GO:1901564 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 388.0
DYD3_k127_1113782_0 MatE - - - 5.128e-211 676.0
DYD3_k127_1113782_1 Protein of unknown function (DUF1211) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001502 289.0
DYD3_k127_1113782_10 Putative thioesterase (yiiD_Cterm) - - - 0.0000000000000000000000000003971 132.0
DYD3_k127_1113782_11 Antibiotic biosynthesis monooxygenase K06996,K21481 - 1.14.99.57 0.000000000000000000002146 97.0
DYD3_k127_1113782_12 - - - - 0.0000000001881 62.0
DYD3_k127_1113782_2 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000558 304.0
DYD3_k127_1113782_3 Nitroreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000206 269.0
DYD3_k127_1113782_4 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005354 272.0
DYD3_k127_1113782_5 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000002045 268.0
DYD3_k127_1113782_6 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000006085 193.0
DYD3_k127_1113782_7 - - - - 0.000000000000000000000000000000001816 138.0
DYD3_k127_1113782_8 YCII-related domain - - - 0.000000000000000000000000000000006082 131.0
DYD3_k127_1115036_0 Catalyzes the attachment of glycine to tRNA(Gly) K01880 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004572 608.0
DYD3_k127_1115036_1 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003971 559.0
DYD3_k127_1115036_2 tRNA synthetases class I (W and Y) K01867 - 6.1.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003475 417.0
DYD3_k127_1115036_3 Type II/IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004644 356.0
DYD3_k127_1115036_4 Inositol monophosphatase family K01092 - 3.1.3.25 0.0000000000000000000000000000000000000009401 154.0
DYD3_k127_1121499_0 COG0076 Glutamate decarboxylase and related PLP-dependent K01593 - 4.1.1.105,4.1.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002705 563.0
DYD3_k127_1121499_1 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 354.0
DYD3_k127_1121499_2 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001833 291.0
DYD3_k127_1121499_3 DnaJ molecular chaperone homology domain - - - 0.0000000000000000000000000000000000000001436 168.0
DYD3_k127_1121499_4 - - - - 0.000000000000000000000000000000000001806 153.0
DYD3_k127_1121499_5 Predicted membrane protein (DUF2214) K08983 - - 0.0000000000000000000002104 102.0
DYD3_k127_1121499_6 - - - - 0.000000006588 68.0
DYD3_k127_1171831_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001188 576.0
DYD3_k127_1171831_1 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006909 462.0
DYD3_k127_1171831_2 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004432 273.0
DYD3_k127_1171831_3 Indole-3-glycerol phosphate synthase K01609 - 4.1.1.48 0.0000000000000000000000000000000000000000000000000000000000436 214.0
DYD3_k127_1171831_4 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000001491 210.0
DYD3_k127_1171831_5 HEAT repeats - - - 0.000000000000000000000000000989 132.0
DYD3_k127_1171831_6 N-(5'phosphoribosyl)anthranilate (PRA) isomerase K01817 - 5.3.1.24 0.0000000000000000000000001811 116.0
DYD3_k127_1171831_7 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18,4.1.3.27 0.0000000000000003628 83.0
DYD3_k127_1171831_8 chemotaxis, protein - - - 0.00002974 57.0
DYD3_k127_1193934_0 Sigma-70 region 2 K03088 - - 0.0000000000000000000000000000000004983 136.0
DYD3_k127_1193934_1 Copper binding proteins, plastocyanin/azurin family K02638 - - 0.00000000000000000000000000000001264 141.0
DYD3_k127_1209674_0 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000482 561.0
DYD3_k127_1209674_1 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002816 272.0
DYD3_k127_1209674_2 Probable molybdopterin binding domain K03831 - 2.7.7.75 0.0000000000000000000000000000000000000000000000000003788 189.0
DYD3_k127_1209674_3 Diguanylate cyclase - - - 0.0000000000000000000001007 113.0
DYD3_k127_1222588_0 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007456 461.0
DYD3_k127_1222588_1 Putative glycosyl hydrolase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001718 274.0
DYD3_k127_1222588_2 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000007536 207.0
DYD3_k127_1222588_3 gluconolactonase activity - - - 0.00000000000000000000000000000000000000001408 170.0
DYD3_k127_1222588_4 PA domain - - - 0.000000000000000000000000000000004542 136.0
DYD3_k127_1222588_5 Serine aminopeptidase, S33 - - - 0.00000000000000000000005048 110.0
DYD3_k127_1222588_6 Rdx family K07401 - - 0.00000000009083 64.0
DYD3_k127_1250694_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 1.312e-218 721.0
DYD3_k127_1250694_1 protein kinase activity K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000002793 220.0
DYD3_k127_1250694_2 DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.0000000000000000000000000000000000000000208 177.0
DYD3_k127_1250694_3 Sporulation related domain - - - 0.000000000000000004131 100.0
DYD3_k127_1250694_4 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.000000001304 72.0
DYD3_k127_1276704_0 Bacterial regulatory protein, Fis family K07714 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 433.0
DYD3_k127_1276704_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000001444 147.0
DYD3_k127_1276704_2 - - - - 0.0000000000000000000000001231 119.0
DYD3_k127_1276704_3 - - - - 0.0000000000000000001497 102.0
DYD3_k127_1276704_4 Tfp pilus assembly protein - - - 0.0000917 51.0
DYD3_k127_1276704_5 type IV pilus modification protein PilV K02458,K02671 - - 0.00009875 53.0
DYD3_k127_1286913_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 3.769e-281 884.0
DYD3_k127_1297699_0 UDP binding domain K00012 - 1.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 373.0
DYD3_k127_1297699_1 PFAM NAD dependent epimerase dehydratase family K08679 - 5.1.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007326 304.0
DYD3_k127_1297699_2 TPR repeat - - - 0.000000000000000000000001897 115.0
DYD3_k127_1335875_0 COG0454 Histone acetyltransferase HPA2 and related - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005224 345.0
DYD3_k127_1335875_1 COG0454 Histone acetyltransferase HPA2 and related - - - 0.000000000000000000000000000000000000000000000001161 194.0
DYD3_k127_1335875_2 - - - - 0.0000000000000000000007985 107.0
DYD3_k127_1387889_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 3.143e-278 888.0
DYD3_k127_1387889_1 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 4.799e-203 652.0
DYD3_k127_1387889_2 Bacterial Ig-like domain - - - 0.00000000000000000000000000000000000001286 154.0
DYD3_k127_1387889_3 Thiolase, C-terminal domain K00626 - 2.3.1.9 0.00000000000000000000000000000001573 129.0
DYD3_k127_1413711_0 B12 binding domain K00548 - 2.1.1.13 0.0 1528.0
DYD3_k127_1413711_1 Transport of potassium into the cell K03549 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015672,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0098655,GO:0098660,GO:0098662 - 8.513e-227 719.0
DYD3_k127_1413711_10 Insulinase (Peptidase family M16) K07263 - - 0.00000000000000000000000000000000000000000000000000000004151 222.0
DYD3_k127_1413711_11 tungstate binding K15495 - - 0.00000000000000000000000000000000000000000000000000001177 201.0
DYD3_k127_1413711_12 DSBA-like thioredoxin domain - - - 0.00000000000000000000000000000000000000000000000001718 189.0
DYD3_k127_1413711_13 YGGT family K02221 - - 0.0000000000000000000000000005489 125.0
DYD3_k127_1413711_14 Divalent ion tolerance protein K03926 - - 0.000000000000000000000004051 106.0
DYD3_k127_1413711_15 redox protein regulator of disulfide bond formation K07397 - - 0.0000000000000000000001054 109.0
DYD3_k127_1413711_16 Belongs to the UPF0235 family K09131 - - 0.0000000000000000000001543 110.0
DYD3_k127_1413711_17 PFAM peptidase S13 D-Ala-D-Ala carboxypeptidase C K07259 - 3.4.16.4 0.0000000000000000002273 102.0
DYD3_k127_1413711_19 - - - - 0.000000000000000009972 85.0
DYD3_k127_1413711_2 Methylenetetrahydrofolate reductase K00297,K00547 - 1.5.1.20,2.1.1.10 1.467e-225 715.0
DYD3_k127_1413711_20 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 - 2.7.8.41,2.7.8.5 0.00000000000000006498 91.0
DYD3_k127_1413711_23 Acetyltransferase (GNAT) domain - - - 0.0008836 48.0
DYD3_k127_1413711_3 Belongs to the aldehyde dehydrogenase family K00294 - 1.2.1.88 5.138e-220 695.0
DYD3_k127_1413711_4 Dehydrogenase K00248,K09478 - 1.3.8.1,1.3.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007003 517.0
DYD3_k127_1413711_5 C4-dicarboxylate anaerobic carrier - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 481.0
DYD3_k127_1413711_6 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001851 440.0
DYD3_k127_1413711_7 Fatty acid desaturase K03921 - 1.14.19.11,1.14.19.2,1.14.19.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005289 413.0
DYD3_k127_1413711_8 Insulinase (Peptidase family M16) K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005482 286.0
DYD3_k127_1413711_9 AAA domain, putative AbiEii toxin, Type IV TA system K01990,K19340 - - 0.00000000000000000000000000000000000000000000000000000000000000000001226 256.0
DYD3_k127_1418797_0 Aminotransferase class-V - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003112 308.0
DYD3_k127_1418797_1 4Fe-4S single cluster domain K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002497 280.0
DYD3_k127_1418797_2 glycosyl transferase group 1 K13668 - 2.4.1.346 0.00000000000000000000000000000000000000000000000000000000003686 220.0
DYD3_k127_1427766_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 6.749e-195 625.0
DYD3_k127_1427766_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006385 606.0
DYD3_k127_1427766_2 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region K00336 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 546.0
DYD3_k127_1427766_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000067 439.0
DYD3_k127_1427766_4 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus K00341 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003162 314.0
DYD3_k127_1427766_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000007693 282.0
DYD3_k127_1427766_6 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000008663 251.0
DYD3_k127_1427766_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000003644 241.0
DYD3_k127_1427766_8 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.000000000000000000000000001102 125.0
DYD3_k127_1427766_9 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.00000000000000000000003926 112.0
DYD3_k127_1437745_0 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009235 453.0
DYD3_k127_1437745_1 L-asparaginase II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 379.0
DYD3_k127_1437745_2 pfkB family carbohydrate kinase K03272 - 2.7.1.167,2.7.7.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005791 351.0
DYD3_k127_1437745_3 Carboxymuconolactone decarboxylase family K01607 - 4.1.1.44 0.00000000000000000000000000000000000000000000000000000028 201.0
DYD3_k127_1437745_4 Capsule assembly protein Wzi - - - 0.0000000000093 78.0
DYD3_k127_1462500_0 repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002123 543.0
DYD3_k127_1490762_0 Putative neutral zinc metallopeptidase K07054 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000631 344.0
DYD3_k127_1490762_1 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000002041 242.0
DYD3_k127_1517165_0 PFAM type I phosphodiesterase nucleotide pyrophosphatase K19670 - 3.11.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000316 574.0
DYD3_k127_1517165_1 PFAM glycosyl transferase group 1 K15521 - 2.4.1.250 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002076 369.0
DYD3_k127_1517165_2 COGs COG1801 conserved - - - 0.000000000000000000000000000000000000000000000005179 187.0
DYD3_k127_1517165_3 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000004849 177.0
DYD3_k127_1517165_4 Putative regulatory protein - - - 0.000000000000000000000000000008158 135.0
DYD3_k127_153215_0 Protein involved in cellulose biosynthesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009298 292.0
DYD3_k127_153215_1 O-methyltransferase activity - - - 0.00000000000000000000000000000000000000000000000006203 187.0
DYD3_k127_153215_2 polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000005785 172.0
DYD3_k127_153215_3 Belongs to the DegT DnrJ EryC1 family - - - 0.00000000000002324 84.0
DYD3_k127_1540744_0 Domain of unknown function (DUF4010) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006535 316.0
DYD3_k127_1540744_1 GAF domain - - - 0.000000000000000000000000000000000000000000000000000000002122 216.0
DYD3_k127_1540744_2 phosphorelay signal transduction system - - - 0.0001147 45.0
DYD3_k127_1540744_3 Universal stress protein family K07090 - - 0.0003578 51.0
DYD3_k127_1550002_0 Bacterial extracellular solute-binding protein K02012 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 297.0
DYD3_k127_1550002_1 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02049,K02052 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001019 277.0
DYD3_k127_1550002_2 GlcNAc-PI de-N-acetylase - - - 0.000000000000000000000000000000000000000000000000000000006013 208.0
DYD3_k127_1553704_0 Domain of unknown function (DUF892) - - - 0.0000000000000000000000000000000000000000004703 166.0
DYD3_k127_1553704_1 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000005592 151.0
DYD3_k127_1553704_2 Protein of unknown function (DUF4242) - - - 0.00000000000000000000000000000000000202 139.0
DYD3_k127_1553704_3 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496 - 3.5.4.19 0.0003 49.0
DYD3_k127_1581348_0 Cytochrome c-type biogenesis protein CcmF C-terminal K02198 - - 9.91e-260 818.0
DYD3_k127_1581348_1 hydrogenase expression formation protein HypD K04654 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003192 535.0
DYD3_k127_1581348_10 - - - - 0.00000000000000004489 87.0
DYD3_k127_1581348_11 - - - - 0.0000000000000001812 89.0
DYD3_k127_1581348_12 Belongs to the carbamoyltransferase HypF family K04656 - - 0.000000001665 59.0
DYD3_k127_1581348_2 Putative ATP-binding cassette K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000225 492.0
DYD3_k127_1581348_3 TIGRFAM hydrogenase expression formation protein HypE K04655 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005125 407.0
DYD3_k127_1581348_4 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001801 334.0
DYD3_k127_1581348_5 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.0000000000000000000000000000000000000003478 155.0
DYD3_k127_1581348_6 HupF/HypC family K04653 - - 0.0000000000000000000000001516 108.0
DYD3_k127_1581348_7 subunit of a heme lyase K02200 - - 0.000000000000000000008257 109.0
DYD3_k127_1581348_8 Transglutaminase/protease-like homologues - - - 0.00000000000000000001398 106.0
DYD3_k127_1581348_9 ribosomal protein - - - 0.000000000000000002424 91.0
DYD3_k127_1582414_0 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000009445 260.0
DYD3_k127_1582414_1 cheY-homologous receiver domain K03413 - - 0.00000000000000000000000000000000000000000000000000000002472 206.0
DYD3_k127_1582414_2 Prokaryotic dksA/traR C4-type zinc finger - - - 0.000000000000000000000000000000000000000000000000000001633 198.0
DYD3_k127_1582414_3 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000000000000000000000000000000000006131 162.0
DYD3_k127_1582414_4 Chemotaxis protein CheA K03407 - 2.7.13.3 0.0000000000000000002524 93.0
DYD3_k127_1582414_5 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0000000000000007364 80.0
DYD3_k127_1582414_6 COG0835 Chemotaxis signal transduction protein K03408 - - 0.000000000007512 76.0
DYD3_k127_1582414_7 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000001407 53.0
DYD3_k127_1595953_0 PTS system mannose/fructose/sorbose family IID component K02796 - - 0.00000000000000000000000000000001229 143.0
DYD3_k127_1595953_1 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 0.000000000000000000000003609 112.0
DYD3_k127_1595953_2 PTS HPr component phosphorylation site K11189 - - 0.00000000000000000001004 104.0
DYD3_k127_1595953_3 PTS system sorbose-specific iic component K02795 - - 0.00000000000000001315 92.0
DYD3_k127_1595953_4 PTS system sorbose subfamily IIB component K19507 - - 0.00000004199 57.0
DYD3_k127_1596499_0 Prolyl oligopeptidase, N-terminal beta-propeller domain K01354 - 3.4.21.83 1.433e-244 778.0
DYD3_k127_1596499_1 Aminotransferase class-V - - - 4.955e-194 638.0
DYD3_k127_1596499_2 helix_turn_helix multiple antibiotic resistance protein K15973 - - 0.000000000000000000000000000000000000000000000008882 175.0
DYD3_k127_1596499_3 TonB dependent receptor K02014 - - 0.0000000000000000000000000000000000000000002558 172.0
DYD3_k127_1596499_4 Belongs to the peptidase S8 family K12287 - - 0.000000000000000000000000000000000000134 162.0
DYD3_k127_1596985_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281 - 1.4.4.2 0.0 1306.0
DYD3_k127_1596985_1 Oligopeptide/dipeptide transporter, C-terminal region K02032,K10823 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005407 344.0
DYD3_k127_1596985_10 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 GO:0003674,GO:0005215,GO:0005216,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015075,GO:0015267,GO:0015318,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022838,GO:0022857,GO:0030104,GO:0031224,GO:0031226,GO:0032535,GO:0034220,GO:0042592,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0090066 - 0.000000000000000000000000000000000000000000000000002927 195.0
DYD3_k127_1596985_11 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000003907 184.0
DYD3_k127_1596985_12 Export-related chaperone CsaA K06878 - - 0.0000000000000000000000000000000000000000000233 178.0
DYD3_k127_1596985_13 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.00000000000000000000000000000000000000000004699 164.0
DYD3_k127_1596985_14 Biotin/lipoate A/B protein ligase family K03800 - 6.3.1.20 0.000000000000000000000000000000000000001592 158.0
DYD3_k127_1596985_15 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005694,GO:0005737,GO:0005829,GO:0006139,GO:0006323,GO:0006351,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010556,GO:0016043,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031326,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0051276,GO:0060255,GO:0065007,GO:0071103,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1903506,GO:2001141 - 0.000000000000000000000000792 110.0
DYD3_k127_1596985_2 Oligopeptide/dipeptide transporter, C-terminal region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005978 319.0
DYD3_k127_1596985_3 Phenazine biosynthesis-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 301.0
DYD3_k127_1596985_4 D-aminopeptidase K16203 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006329 294.0
DYD3_k127_1596985_5 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008128 305.0
DYD3_k127_1596985_6 Thymidine kinase K00857 - 2.7.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000009217 265.0
DYD3_k127_1596985_7 Binding-protein-dependent transport system inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000001725 246.0
DYD3_k127_1596985_8 Binding-protein-dependent transport system inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000004073 234.0
DYD3_k127_1596985_9 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.000000000000000000000000000000000000000000000000000005006 196.0
DYD3_k127_1606807_0 Two component, sigma54 specific, transcriptional regulator, Fis family K02667,K07713,K07714,K19641 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 468.0
DYD3_k127_1606807_1 COG3852 Signal transduction histidine kinase, nitrogen specific K07708 - 2.7.13.3 0.000000000000000000000003876 116.0
DYD3_k127_1606807_2 Prokaryotic N-terminal methylation motif - - - 0.00000000000000000000001172 108.0
DYD3_k127_1606807_3 Prokaryotic N-terminal methylation motif - - - 0.0000000000000000000000571 106.0
DYD3_k127_1606807_4 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K02482 - 2.7.13.3 0.0000000000000001087 89.0
DYD3_k127_1613996_0 Leucyl-tRNA synthetase, Domain 2 K01869 - 6.1.1.4 0.0 1103.0
DYD3_k127_1613996_1 Asparaginase K01444 - 3.5.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002965 380.0
DYD3_k127_1613996_2 Acyl-ACP thioesterase - - - 0.000000000000000000000000000000000000001633 166.0
DYD3_k127_1613996_3 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). - - - 0.0000000000000000000000003372 121.0
DYD3_k127_1613996_4 Thioredoxin - - - 0.000002986 50.0
DYD3_k127_1613996_5 Outer membrane protein beta-barrel domain - - - 0.0004618 50.0
DYD3_k127_1617056_0 PhoD-like phosphatase K01113 - 3.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000004146 225.0
DYD3_k127_1617056_1 Protein of unknown function (DUF541) K09797 - - 0.0000000000000000000000000000000000000000000000000005219 194.0
DYD3_k127_1617056_2 - - - - 0.000000000000000000000000003918 116.0
DYD3_k127_1617056_3 Lysin motif - - - 0.0000000000000000001032 91.0
DYD3_k127_1625105_0 E1-E2 ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003785 588.0
DYD3_k127_1625105_1 Cytochrome C and Quinol oxidase polypeptide I K02274 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006682 501.0
DYD3_k127_1625105_2 Domain of unknown function (DUF1611_N) Rossmann-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008672 378.0
DYD3_k127_1625105_3 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000001156 243.0
DYD3_k127_1625105_4 Cytochrome C oxidase subunit II, periplasmic domain K02275 - 1.9.3.1 0.0000000000000000000000000000002839 132.0
DYD3_k127_164576_0 Peptidase family M1 domain - - - 1.748e-245 778.0
DYD3_k127_164576_1 DEAD-like helicases superfamily K11927 - 3.6.4.13 2.482e-205 645.0
DYD3_k127_164576_2 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000001412 190.0
DYD3_k127_164576_3 Membrane - - - 0.0000000000000118 81.0
DYD3_k127_166802_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002893 523.0
DYD3_k127_166802_1 Transglutaminase-like superfamily - - - 0.000000000000000000000000000000000000000000000000001867 194.0
DYD3_k127_1693749_0 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004155 458.0
DYD3_k127_1693749_1 PFAM Glyoxalase bleomycin resistance protein dioxygenase K15975 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 389.0
DYD3_k127_1693749_2 Sigma-70 region 2 K03088 - - 0.0000000000000000000000000000000000000000000000000000000005274 207.0
DYD3_k127_1693749_3 Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase) K01955 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000003867 203.0
DYD3_k127_1693749_4 Dienelactone hydrolase family K06999 - - 0.000000000000000000000000000000000000000000000000005347 188.0
DYD3_k127_1693749_5 - - - - 0.0000000000000000000000000000000000000000005829 178.0
DYD3_k127_1693749_6 SCP-2 sterol transfer family - - - 0.0000000000000000000001637 105.0
DYD3_k127_1693749_7 - - - - 0.00000000002617 76.0
DYD3_k127_1693749_8 domain, Protein - - - 0.0000001241 63.0
DYD3_k127_1706881_0 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00162 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002676 417.0
DYD3_k127_1706881_1 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 384.0
DYD3_k127_1706881_2 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003536 387.0
DYD3_k127_1706881_3 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000000000000000000000000000006991 228.0
DYD3_k127_1706881_4 PFAM FAD dependent oxidoreductase K03153 - 1.4.3.19 0.0000000000000000000000000000000000000000001758 171.0
DYD3_k127_1706881_5 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000106 139.0
DYD3_k127_1706881_6 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.000000000000000000001783 111.0
DYD3_k127_1706881_7 Protein of unknown function (DUF1684) K09164 - - 0.0000000000000003374 89.0
DYD3_k127_1706881_8 Anti-sigma-K factor rskA - - - 0.00000000000205 79.0
DYD3_k127_1720621_0 PFAM CBS domain containing protein K06402 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 325.0
DYD3_k127_1720621_1 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000001594 101.0
DYD3_k127_1729363_0 Zinc-binding dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000077 349.0
DYD3_k127_1729363_1 Conserved TM helix - - - 0.00000000000000000000000000000000000000000000001487 183.0
DYD3_k127_1729363_2 - - - - 0.000000000000000000000000000000000000000000005669 169.0
DYD3_k127_1746710_0 Competence protein K02238 - - 0.00000000000000000000000000000000000000000000000000000591 211.0
DYD3_k127_1746710_1 PFAM Late competence development protein ComFB K02241 - - 0.0000000004722 64.0
DYD3_k127_175794_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 8.405e-203 643.0
DYD3_k127_175794_1 TIGRFAM 6-pyruvoyl tetrahydropterin synthase QueD family protein K01737 - 4.1.2.50,4.2.3.12 0.00000000000000005177 93.0
DYD3_k127_175794_2 - - - - 0.00000000000000009291 92.0
DYD3_k127_1778613_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006354 430.0
DYD3_k127_1778613_1 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K01563,K11991 - 3.5.4.33,3.8.1.5 0.000000000000000000000000000000000000000000000003189 182.0
DYD3_k127_1778613_2 Resolvase, N terminal domain - - - 0.0003561 48.0
DYD3_k127_1780289_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001864 594.0
DYD3_k127_1780289_1 Participates in both transcription termination and antitermination K02600 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003253 603.0
DYD3_k127_1780289_2 SigmaW regulon antibacterial - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003226 417.0
DYD3_k127_1780289_3 Zinc dependent phospholipase C - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002053 316.0
DYD3_k127_1780289_4 NfeD-like C-terminal, partner-binding K07403 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009669 288.0
DYD3_k127_1780289_5 Multi-copper polyphenol oxidoreductase laccase K05810 - - 0.00000000000000000000000000000000000001172 157.0
DYD3_k127_1780289_6 Required for maturation of 30S ribosomal subunits K09748 - - 0.00000000000000000000000000007805 124.0
DYD3_k127_1780289_7 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.00000000000004208 78.0
DYD3_k127_1780289_8 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family - - - 0.0000001941 64.0
DYD3_k127_1786266_0 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000005248 147.0
DYD3_k127_1786266_1 Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.00000000000000001167 90.0
DYD3_k127_1786266_2 Putative zinc-finger - - - 0.000001437 59.0
DYD3_k127_1796749_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 8.704e-296 923.0
DYD3_k127_1796749_1 Insulinase (Peptidase family M16) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009061 412.0
DYD3_k127_1796749_2 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.00000000000000000000000000000007383 126.0
DYD3_k127_1829143_0 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002321 584.0
DYD3_k127_1829143_1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00609 - 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008027 508.0
DYD3_k127_1836514_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006627 481.0
DYD3_k127_1836514_1 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005474 423.0
DYD3_k127_1836514_2 MacB-like periplasmic core domain K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 351.0
DYD3_k127_1836514_3 Part of the ABC transporter complex LolCDE involved in the translocation of K09810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001132 286.0
DYD3_k127_1836514_4 ATP:guanido phosphotransferase, C-terminal catalytic domain K19405 - 2.7.14.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000004674 268.0
DYD3_k127_1836514_5 UvrB/uvrC motif K19411 - - 0.000000000000000000000000000000009748 142.0
DYD3_k127_1839392_0 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.000000000000000000000000000000000000000000002822 183.0
DYD3_k127_1839392_1 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.000000000000000000000000000000000000000278 156.0
DYD3_k127_1839392_2 - - - - 0.0000000000000000004947 101.0
DYD3_k127_1864622_0 PFAM 6-phosphogluconate dehydrogenase NAD-binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004006 253.0
DYD3_k127_1864622_1 - - - - 0.0000000000000000000000000000000000000000000794 171.0
DYD3_k127_1864622_2 Serine aminopeptidase, S33 - - - 0.0000000000002584 73.0
DYD3_k127_1864622_3 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0002146 51.0
DYD3_k127_187200_0 Aldehyde dehydrogenase family K00128 - 1.2.1.3 4.616e-232 744.0
DYD3_k127_187200_1 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 - 4.1.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003342 471.0
DYD3_k127_187200_2 protein kinase activity K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003765 349.0
DYD3_k127_187200_3 Inositol monophosphatase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002646 316.0
DYD3_k127_187200_4 Rhomboid family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007293 293.0
DYD3_k127_1877770_0 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018 525.0
DYD3_k127_1877770_1 protein kinase activity - - - 0.00000000000000000004769 92.0
DYD3_k127_1878184_0 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000006499 205.0
DYD3_k127_1878184_1 - - - - 0.0000000000000000000000000007918 122.0
DYD3_k127_1878184_2 CHRD domain - - - 0.0000000000000000000001664 104.0
DYD3_k127_1878184_3 - - - - 0.000000000000000000003003 97.0
DYD3_k127_1878184_4 Putative bacterial sensory transduction regulator - - - 0.000000000003744 74.0
DYD3_k127_1878184_5 - - - - 0.000000002371 66.0
DYD3_k127_1883902_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 3.077e-205 677.0
DYD3_k127_1883902_1 Pyridoxal-phosphate dependent enzyme K01733 - 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004695 363.0
DYD3_k127_1883902_2 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 317.0
DYD3_k127_1883902_3 Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes K06898,K09121 - 4.99.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000004765 273.0
DYD3_k127_1883902_4 Surface antigen K07277 - - 0.000000000000000000000001267 112.0
DYD3_k127_1883902_5 GGDEF domain - - - 0.00000000000005856 85.0
DYD3_k127_1883902_6 Amidohydrolase family - - - 0.00000000007109 64.0
DYD3_k127_1883902_7 chaperone-mediated protein folding - - - 0.0000000008353 72.0
DYD3_k127_1889311_0 LVIVD repeat - - - 7.612e-275 872.0
DYD3_k127_1889311_1 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 320.0
DYD3_k127_1889311_2 Domain of unknown function (DUF305) - - - 0.000000000000000000000000000000000000000000000000000000001265 207.0
DYD3_k127_1889311_3 DinB family - - - 0.000000000000000000000000000000000000000000000000006549 186.0
DYD3_k127_1889311_4 RNA signal recognition particle 4.5S RNA - - - 0.00000000000000000000000000000000000000000000001469 174.0
DYD3_k127_1889311_5 DinB family - - - 0.00000000000000000000000000000000000000001601 158.0
DYD3_k127_1889311_6 regulatory protein TetR K16137 - - 0.00000000000001752 76.0
DYD3_k127_1895418_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000253 458.0
DYD3_k127_1905564_0 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 520.0
DYD3_k127_1905564_1 Biotin-lipoyl like K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006652 375.0
DYD3_k127_1905564_2 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006778 383.0
DYD3_k127_1905564_3 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 362.0
DYD3_k127_1905564_4 membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003414 341.0
DYD3_k127_1905564_5 Outer membrane efflux protein K12340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009596 268.0
DYD3_k127_1905564_6 creatininase K01470,K22232 - 3.5.2.10 0.000000000000000000000000000000000000000000000000000007759 196.0
DYD3_k127_1905564_7 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000002357 87.0
DYD3_k127_1907251_0 Glycosyl hydrolase 36 superfamily, catalytic domain K13688 - - 0.0 1055.0
DYD3_k127_1907251_1 DinB family - - - 0.000000006268 62.0
DYD3_k127_1915017_0 NAD synthase K01916 - 6.3.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006674 606.0
DYD3_k127_1915017_1 Insulinase (Peptidase family M16) K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 548.0
DYD3_k127_1915017_10 FES K03575 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008661 259.0
DYD3_k127_1915017_11 phosphatidate phosphatase activity K09474,K19302 - 3.1.3.2,3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000001956 279.0
DYD3_k127_1915017_12 ABC transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000006955 238.0
DYD3_k127_1915017_13 - - - - 0.00000000000000000000000000000000000000000000000000000000000000003525 235.0
DYD3_k127_1915017_14 Quinolinate phosphoribosyl transferase, C-terminal domain K00767 - 2.4.2.19 0.000000000000000000000000000000000000000000000000000000000001786 219.0
DYD3_k127_1915017_15 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000005665 199.0
DYD3_k127_1915017_16 Permease MlaE K02066 - - 0.0000000000000000000000000000000000000000000000000004464 201.0
DYD3_k127_1915017_18 Thioesterase superfamily - - - 0.0000000000000000000000000000000001753 151.0
DYD3_k127_1915017_19 serine-type peptidase activity - - - 0.000000000000000000000001268 106.0
DYD3_k127_1915017_2 Peptidase, M16 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006433 469.0
DYD3_k127_1915017_20 conserved protein (DUF2203) - - - 0.0000000000000000007986 100.0
DYD3_k127_1915017_21 ABC-type transport system involved in resistance to organic solvents periplasmic component K02067 - - 0.00000000000000002818 93.0
DYD3_k127_1915017_22 Esterase of the alpha-beta hydrolase superfamily K07001 - - 0.000000004514 68.0
DYD3_k127_1915017_3 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 471.0
DYD3_k127_1915017_4 Cystathionine beta-synthase K01738 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004327 441.0
DYD3_k127_1915017_5 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001967 416.0
DYD3_k127_1915017_6 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004434 400.0
DYD3_k127_1915017_7 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA K00784 - 3.1.26.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002636 367.0
DYD3_k127_1915017_8 Deoxyribodipyrimidine photo-lyase K01669 - 4.1.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000335 340.0
DYD3_k127_1915017_9 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 344.0
DYD3_k127_1925606_0 Putative RNA methylase family UPF0020 K07444 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001825 372.0
DYD3_k127_1925606_1 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K17837 - 3.5.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000007759 264.0
DYD3_k127_1925606_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000006791 218.0
DYD3_k127_1925696_0 Hsp70 protein K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002391 559.0
DYD3_k127_1925696_1 Alanine dehydrogenase/PNT, N-terminal domain K00259 - 1.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005032 556.0
DYD3_k127_1925696_2 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.00000000000000000000000000000000000000000000002026 176.0
DYD3_k127_1925696_3 Cysteine-rich domain K18928 - - 0.000000000000000000001763 100.0
DYD3_k127_1930198_0 peptide catabolic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003487 358.0
DYD3_k127_1930198_1 Biotin-lipoyl like - - - 0.0000000000000000000000000000000000000000000000009086 193.0
DYD3_k127_19395_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 3.043e-287 903.0
DYD3_k127_1970261_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138,K18307 - - 6.132e-304 963.0
DYD3_k127_1970261_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000001916 217.0
DYD3_k127_1970261_2 - - - - 0.00000000000000000000000000001183 130.0
DYD3_k127_1970261_3 outer membrane efflux protein - - - 0.000000000000004371 91.0
DYD3_k127_1990714_1 von Willebrand factor type A domain K07114 - - 0.00000001007 62.0
DYD3_k127_1995218_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002294 458.0
DYD3_k127_1998399_0 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006947 369.0
DYD3_k127_1998399_1 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002507 326.0
DYD3_k127_1998399_2 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002286 310.0
DYD3_k127_1998399_3 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.00000000000000000000000000000000000000000000000000000006624 213.0
DYD3_k127_1998399_4 Cytidylyltransferase family K00981 - 2.7.7.41 0.00000000000000000000000000000000000000000001488 181.0
DYD3_k127_1998399_5 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.0005693 43.0
DYD3_k127_2026721_0 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0016740,GO:0016765,GO:0019899,GO:0030312,GO:0035375,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 2.5.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 298.0
DYD3_k127_2026721_1 ABC transporter K02013 - 3.6.3.34 0.00000000000000000000000000000000000000000000000000000000001751 229.0
DYD3_k127_2026721_2 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.000000000000000000000000000000000000000000000000000000006107 222.0
DYD3_k127_2026721_3 Bifunctional nuclease K08999 - - 0.000000000000000000000000000000000000000000002934 173.0
DYD3_k127_2026721_4 Periplasmic binding protein K02016,K06858 - - 0.0000000000000000000000000000003166 138.0
DYD3_k127_2026721_5 Cytochrome c - - - 0.000000000000000000000002151 117.0
DYD3_k127_2026721_6 cobalamin-transporting ATPase activity K02014,K16092 - - 0.000000000000009922 86.0
DYD3_k127_203914_0 Aldehyde dehydrogenase family - - - 0.0000000000000000000000000000000000000000000000000000001443 198.0
DYD3_k127_203914_1 nuclear chromosome segregation - - - 0.0000000000000000000000000000000000000702 155.0
DYD3_k127_203914_2 D-aminopeptidase K16203 - - 0.0000000000000000000000000000000005178 143.0
DYD3_k127_204273_0 Beta-L-arabinofuranosidase, GH127 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 346.0
DYD3_k127_204273_1 PFAM Glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.0000000000000000000000000000000000000000000000000000000000000000001255 249.0
DYD3_k127_204273_2 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.00000000000000000000000000007079 134.0
DYD3_k127_2055899_0 COG0433 Predicted ATPase K06915 - - 4.336e-238 754.0
DYD3_k127_2055899_1 AAA domain K03546 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 560.0
DYD3_k127_2055899_2 Calcineurin-like phosphoesterase superfamily domain K03547 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 347.0
DYD3_k127_2055899_3 Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003908 316.0
DYD3_k127_2055899_4 Aminotransferase K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002221 309.0
DYD3_k127_2055899_5 GTP cyclohydrolase I K00950,K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006082,GO:0006139,GO:0006575,GO:0006725,GO:0006729,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008616,GO:0009058,GO:0009108,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0019752,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034404,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0040007,GO:0042455,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046116,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617,GO:1901657,GO:1901659 2.7.6.3,3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001324 274.0
DYD3_k127_2055899_6 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000000000000000000000000000001235 188.0
DYD3_k127_2055899_7 KR domain - - - 0.00000000000000000000000000000000000000000000000002181 195.0
DYD3_k127_2055899_8 COGs COG2380 conserved - - - 0.0000000000000000000000000000000000002531 153.0
DYD3_k127_2055899_9 DbpA RNA binding domain K05592 - 3.6.4.13 0.000000000000000000000000005124 126.0
DYD3_k127_2059847_0 electron transfer activity K00428 - 1.11.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003012 489.0
DYD3_k127_2059847_1 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 392.0
DYD3_k127_2059847_2 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000001745 170.0
DYD3_k127_206916_0 COG3387 Glucoamylase and related glycosyl hydrolases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006544 491.0
DYD3_k127_206916_1 Glycosyltransferase family 20 K16055 GO:0003674,GO:0003824,GO:0004805,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0005984,GO:0005991,GO:0005992,GO:0006793,GO:0006796,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0033554,GO:0034637,GO:0042578,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044424,GO:0044464,GO:0046351,GO:0050896,GO:0051716,GO:0070413,GO:0071704,GO:1901576 2.4.1.15,3.1.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005431 387.0
DYD3_k127_2071366_0 Metallo-beta-lactamase superfamily K17837 - 3.5.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004585 332.0
DYD3_k127_2071366_1 YCII-related domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001995 241.0
DYD3_k127_2071366_2 lactoylglutathione lyase activity - - - 0.00000000000000000000000000000000000000000005894 164.0
DYD3_k127_2071366_3 YjgF/chorismate_mutase-like, putative endoribonuclease - - - 0.00000000000000000000000000000000000002441 154.0
DYD3_k127_2071366_4 - - - - 0.000000000000000000000000031 111.0
DYD3_k127_2071366_5 Domain of unknown function (DUF4440) - - - 0.000000004354 64.0
DYD3_k127_2071366_6 - - - - 0.00000003872 62.0
DYD3_k127_2071366_7 gas vesicle protein - - - 0.000001084 56.0
DYD3_k127_2071366_8 Dihydrodipicolinate synthetase family K01714 - 4.3.3.7 0.00002119 49.0
DYD3_k127_2077847_0 O-acyltransferase activity K13018 - 2.3.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003595 273.0
DYD3_k127_2077847_1 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000000000003993 188.0
DYD3_k127_2088796_0 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004369 522.0
DYD3_k127_2088796_1 Pyridine nucleotide-disulphide oxidoreductase K00529 - 1.18.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002802 352.0
DYD3_k127_2088796_2 Belongs to the N(4) N(6)-methyltransferase family K00571 - 2.1.1.72 0.0000000000000000000000000000000000000000000000000000000000000000004757 250.0
DYD3_k127_2088796_3 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000907 159.0
DYD3_k127_2088796_4 GTP cyclohydrolase K01495 - 3.5.4.16 0.0000000000000000000000000000000000000001037 161.0
DYD3_k127_2088796_5 - - - - 0.000000000000000000000000000225 119.0
DYD3_k127_2092019_0 Protein kinase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002027 449.0
DYD3_k127_2092019_1 Metallo-beta-lactamase superfamily - - - 0.00000000000000006959 88.0
DYD3_k127_2092019_2 - - - - 0.000000000000006059 85.0
DYD3_k127_2106367_0 Amidohydrolase family K06015 - 3.5.1.81 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007234 371.0
DYD3_k127_2117295_0 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 376.0
DYD3_k127_2117295_1 transposition, DNA-mediated K02342 - 2.7.7.7 0.00000000000000000000000000000000002057 149.0
DYD3_k127_2131197_0 Diguanylate cyclase, GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002567 328.0
DYD3_k127_2131197_1 PFAM Sodium calcium exchanger protein K07300 - - 0.00000000000000000000000000000000000000000000000004379 185.0
DYD3_k127_2131197_2 - - - - 0.000000002832 63.0
DYD3_k127_2134252_0 TIGRFAM succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 - 1.3.5.1,1.3.5.4 0.0 1021.0
DYD3_k127_2134252_1 4Fe-4S binding domain K00240 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 380.0
DYD3_k127_2134252_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001439 296.0
DYD3_k127_2134252_3 LVIVD repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000006079 255.0
DYD3_k127_2134252_4 Nicastrin K01301 - 3.4.17.21 0.00000000008905 68.0
DYD3_k127_2157188_0 fumarylacetoacetate (FAA) hydrolase K01555 - 3.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004558 477.0
DYD3_k127_2157188_1 Zn-dependent protease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003484 348.0
DYD3_k127_2157188_2 Rhomboid family - - - 0.0000000000000000000000000000000008971 141.0
DYD3_k127_2157188_3 histidyl-tRNA synthetase - - - 0.00001072 49.0
DYD3_k127_2166386_0 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002056 366.0
DYD3_k127_2166386_1 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001964 353.0
DYD3_k127_2166386_2 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000008935 257.0
DYD3_k127_2166386_3 TIGRFAM DNA protecting protein DprA K04096 - - 0.0000000000000000000000000000000000000000000000000000000006883 213.0
DYD3_k127_2166386_4 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000002636 124.0
DYD3_k127_2176208_0 - - - - 0.0000000000000000000000000000000000000000000000001013 199.0
DYD3_k127_2176208_1 Protein of unknown function (DUF1232) - - - 0.000000000000000000000000000000003488 138.0
DYD3_k127_2176208_2 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000004529 62.0
DYD3_k127_2176208_4 - - - - 0.0007654 48.0
DYD3_k127_2183529_0 Endoribonuclease that initiates mRNA decay K18682 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004694 601.0
DYD3_k127_2183529_1 B3/4 domain K01890 - 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 614.0
DYD3_k127_2183529_10 EXOIII K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000001162 183.0
DYD3_k127_2183529_11 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.000000000000000000000000000000000000007992 147.0
DYD3_k127_2183529_12 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000006146 85.0
DYD3_k127_2183529_13 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.00000001314 63.0
DYD3_k127_2183529_14 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.000001529 61.0
DYD3_k127_2183529_2 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004227 582.0
DYD3_k127_2183529_3 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002069 369.0
DYD3_k127_2183529_4 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002563 355.0
DYD3_k127_2183529_5 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001635 341.0
DYD3_k127_2183529_6 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 319.0
DYD3_k127_2183529_7 Arginine deiminase K01478 - 3.5.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000978 270.0
DYD3_k127_2183529_8 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001621 244.0
DYD3_k127_2183529_9 Polyprenyl synthetase K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000000000000000000000008041 238.0
DYD3_k127_2185402_0 L-carnitine dehydratase bile acid-inducible protein F - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002109 520.0
DYD3_k127_2185402_1 - - - - 0.00000001052 68.0
DYD3_k127_2188818_0 hydrolase activity, acting on ester bonds K01259 - 3.4.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002878 291.0
DYD3_k127_2188818_1 Protein of unknown function (DUF1697) - - - 0.00000000000000000000000000000000000001514 150.0
DYD3_k127_2188818_2 hydrolase activity, acting on ester bonds K01259 - 3.4.11.5 0.000000000000000000000007115 102.0
DYD3_k127_2188818_3 Putative stress-induced transcription regulator - - - 0.00000000000000004616 83.0
DYD3_k127_2188818_4 AlkA N-terminal domain K13529 - 3.2.2.21 0.0000000398 62.0
DYD3_k127_2192330_0 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 510.0
DYD3_k127_2192330_1 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 396.0
DYD3_k127_2192330_2 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K03309 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002152 381.0
DYD3_k127_2192330_3 tRNA synthetases class I (E and Q), catalytic domain K01894 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002142 330.0
DYD3_k127_2192330_4 protein conserved in bacteria - - - 0.000000000000000001146 99.0
DYD3_k127_2197199_0 2-oxoglutarate dehydrogenase C-terminal K00164 - 1.2.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 497.0
DYD3_k127_2197199_1 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003246 398.0
DYD3_k127_2197199_2 endonuclease activity - - - 0.00000000000000000000000000000000004891 138.0
DYD3_k127_2208843_0 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009596 539.0
DYD3_k127_2208843_1 NmrA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007813 323.0
DYD3_k127_2208843_2 NAD(P)H-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007825 324.0
DYD3_k127_2208843_3 conserved protein, contains double-stranded beta-helix domain - - - 0.000000000000000000000000000000000000001481 151.0
DYD3_k127_2208843_4 Alpha/beta hydrolase family - - - 0.000000000000006343 76.0
DYD3_k127_2208843_5 Tetratricopeptide repeat - - - 0.000000000001548 76.0
DYD3_k127_2216867_0 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004603 439.0
DYD3_k127_2216867_1 Catalyzes the conversion of 3'-phosphate to a 2',3'- cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps (A) adenylation of the enzyme by ATP K01974 GO:0003674,GO:0003824,GO:0003963,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009975,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016886,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:1901360 6.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000009135 279.0
DYD3_k127_2216867_2 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003347 244.0
DYD3_k127_2216867_3 Thymidine kinase K00857 - 2.7.1.21 0.000000000000000000000000000000000000000000000000000000000000001457 233.0
DYD3_k127_2216867_4 radical SAM domain protein - - - 0.00000000000000000000000000001995 131.0
DYD3_k127_2216867_5 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000002743 133.0
DYD3_k127_2216867_6 GHMP kinases N terminal domain K07031 - 2.7.1.168 0.00000000002966 77.0
DYD3_k127_2216867_7 Zn peptidase - - - 0.000000002006 70.0
DYD3_k127_2226886_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 439.0
DYD3_k127_2226886_1 RadC-like JAB domain K03630 - - 0.000000000000000000000000000000000000000000000000002219 184.0
DYD3_k127_2232485_0 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001979 476.0
DYD3_k127_2232485_1 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002028 416.0
DYD3_k127_2232485_10 amine oxidase K01854 - 5.4.99.9 0.0000000000001321 70.0
DYD3_k127_2232485_2 PFAM 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase K06898 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001526 259.0
DYD3_k127_2232485_3 Peptidase family S41 - - - 0.000000000000000000000000000000000000000000000000000000000000000000006357 252.0
DYD3_k127_2232485_4 Mediates influx of magnesium ions K03284 - - 0.00000000000000000000000000000000000000000000000000000000000000000003995 242.0
DYD3_k127_2232485_5 Glycosyl transferase, family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000005762 237.0
DYD3_k127_2232485_6 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02806 - - 0.000000000000000000000000000000000000000000000000000000000000009822 218.0
DYD3_k127_2232485_7 - - - - 0.000000000000000000000000000000000312 144.0
DYD3_k127_2232485_8 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000002345 130.0
DYD3_k127_2232485_9 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.0000000000000000000000001272 107.0
DYD3_k127_2236466_0 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 562.0
DYD3_k127_2236466_1 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003916 551.0
DYD3_k127_2236466_10 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.00000000003732 74.0
DYD3_k127_2236466_2 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000281 462.0
DYD3_k127_2236466_3 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002787 370.0
DYD3_k127_2236466_4 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000233 264.0
DYD3_k127_2236466_5 Helix-turn-helix domain - - - 0.00000000000000000000000000000000000000000000000000002554 199.0
DYD3_k127_2236466_6 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.000000000000000000000000000000000001187 155.0
DYD3_k127_2236466_7 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.000000000000000000000000000000003545 131.0
DYD3_k127_2236466_8 LppC putative lipoprotein - - - 0.000000000000000002235 94.0
DYD3_k127_2236466_9 Ribosomal protein L34 K02914 - - 0.0000000000000001559 79.0
DYD3_k127_2252247_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1180.0
DYD3_k127_2252247_1 AcrB/AcrD/AcrF family K03296 - - 0.0 1053.0
DYD3_k127_2252247_2 diguanylate cyclase K02488 - 2.7.7.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 436.0
DYD3_k127_2252247_3 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000001322 247.0
DYD3_k127_2252247_4 COG1506 Dipeptidyl aminopeptidases acylaminoacyl-peptidases - - - 0.0003818 52.0
DYD3_k127_22928_0 Na dependent nucleoside transporter K03317 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009211 428.0
DYD3_k127_22928_1 TIGRFAM phosphate ABC transporter, phosphate-binding protein K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 357.0
DYD3_k127_22928_2 Transcriptional regulatory protein, C terminal K07657 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001961 335.0
DYD3_k127_22928_3 HAMP domain K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 351.0
DYD3_k127_22928_4 Adenosine/AMP deaminase K01488 - 3.5.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004714 323.0
DYD3_k127_22928_5 - - - - 0.00000000005596 66.0
DYD3_k127_22928_6 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000001421 68.0
DYD3_k127_2307490_0 PFAM ABC transporter related K16786,K16787 - - 0.0000000000000000000000000000000000001941 156.0
DYD3_k127_2307490_1 ATPases associated with a variety of cellular activities K16786,K16787 - - 0.00000000000000000000000005045 120.0
DYD3_k127_2307667_0 Glycosyl hydrolase family 3 C-terminal domain K01207 - 3.2.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001905 434.0
DYD3_k127_2307667_1 Beta-lactamase - - - 0.000000000000001058 90.0
DYD3_k127_230947_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit K02117 - 3.6.3.14,3.6.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007593 588.0
DYD3_k127_230947_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit K02118 - - 0.0000000002619 74.0
DYD3_k127_2350040_0 peptidyl-tyrosine sulfation - - - 0.0000001285 65.0
DYD3_k127_2351234_0 May be involved in recombinational repair of damaged DNA K03631 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 424.0
DYD3_k127_2351234_1 Cytochrome oxidase assembly protein K02259 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006834 277.0
DYD3_k127_2351234_2 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000003068 272.0
DYD3_k127_2351234_3 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.00000000000000000000000000008332 121.0
DYD3_k127_2351977_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004641 332.0
DYD3_k127_2351977_1 nucleic acid-binding protein contains PIN domain - - - 0.000000000000000002858 89.0
DYD3_k127_2352343_0 Glycosyl hydrolase 36 superfamily, catalytic domain K13688 - - 4.534e-253 797.0
DYD3_k127_2371837_0 response to abiotic stimulus K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000995 497.0
DYD3_k127_2371837_1 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000373 386.0
DYD3_k127_2371837_10 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000006043 119.0
DYD3_k127_2371837_11 - - - - 0.000000000000000001626 94.0
DYD3_k127_2371837_12 Periplasmic component of the Tol biopolymer transport system K03641 - - 0.000000000000002114 87.0
DYD3_k127_2371837_13 - - - - 0.000000000001424 80.0
DYD3_k127_2371837_2 Acetohydroxy acid isomeroreductase, NADPH-binding domain K06988 - 1.5.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001729 308.0
DYD3_k127_2371837_3 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000004009 217.0
DYD3_k127_2371837_4 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000000000000000000000000005579 222.0
DYD3_k127_2371837_5 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000000000000000002189 207.0
DYD3_k127_2371837_6 PFAM regulatory protein, ArsR - - - 0.000000000000000000000000000000000000000000000000006899 182.0
DYD3_k127_2371837_7 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000000000000000000000003648 182.0
DYD3_k127_2371837_8 - - - - 0.000000000000000000000000000000000000000000003402 168.0
DYD3_k127_2371837_9 FR47-like protein K18816 - 2.3.1.82 0.000000000000000000000000000000000003396 142.0
DYD3_k127_2385579_0 histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 452.0
DYD3_k127_2385579_1 2 iron, 2 sulfur cluster binding K13643 - - 0.000000000000000000000000001513 117.0
DYD3_k127_238933_0 PFAM V-type ATPase 116 kDa K02123 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 340.0
DYD3_k127_238933_1 Vitamin K epoxide reductase family - - - 0.000000000000000000000000000000000022 140.0
DYD3_k127_238933_2 ATP hydrolysis coupled proton transport K02110,K02124 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0000000000000159 77.0
DYD3_k127_2410587_0 Nicastrin K01301 - 3.4.17.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002214 524.0
DYD3_k127_2410587_1 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.000000000000000000000000000000000000000000004822 163.0
DYD3_k127_2414453_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.000000000000000000000000000000000000000000003308 180.0
DYD3_k127_2414453_1 Oxygen tolerance - - - 0.00000000000000000000000000000000000006961 164.0
DYD3_k127_241527_0 PFAM Extracellular ligand-binding receptor K01999 - - 0.00000000000000000000000000000000007813 148.0
DYD3_k127_241527_1 Cold shock protein K03704 - - 0.000000000000000000000000001452 117.0
DYD3_k127_241527_2 LVIVD repeat - - - 0.0000938 52.0
DYD3_k127_2423588_0 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004511 422.0
DYD3_k127_2423588_1 tail specific protease K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000003569 185.0
DYD3_k127_2423588_2 Methyltransferase small domain K02493 - 2.1.1.297 0.000000000000000000000000000000000000000000000001285 186.0
DYD3_k127_2423588_3 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.000000000000000000000000000000000002372 151.0
DYD3_k127_2423588_4 Binds the 23S rRNA K02909 - - 0.0000000000000000000001829 101.0
DYD3_k127_2423588_5 Control of competence regulator ComK, YlbF/YmcA - - - 0.0000000000000000002133 92.0
DYD3_k127_2426393_0 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008331 487.0
DYD3_k127_2426393_1 membrane organization - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009336 461.0
DYD3_k127_2426393_2 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.00000000000000000000000000000000000000000000000000000000001152 216.0
DYD3_k127_2426393_3 Calcineurin-like phosphoesterase - - - 0.00000000000000000000000000000000000000000000352 185.0
DYD3_k127_2426393_4 SURF1 family K14998 - - 0.00000000000000000000000000000001317 142.0
DYD3_k127_2426393_5 SdiA-regulated - - - 0.000000000002378 78.0
DYD3_k127_2426393_6 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0003328 44.0
DYD3_k127_2438245_0 Belongs to the deoxyhypusine synthase family K00809 - 2.5.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009939 492.0
DYD3_k127_2438245_1 TonB dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003097 478.0
DYD3_k127_2438245_2 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 447.0
DYD3_k127_2438245_3 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 GO:0003674,GO:0003824,GO:0006091,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009055,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0018130,GO:0019438,GO:0022900,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0052693,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.17.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001251 275.0
DYD3_k127_2438245_4 Major facilitator superfamily MFS_1 - - - 0.0000000000000000000000000000000000000000000000000000007289 211.0
DYD3_k127_2438245_5 - - - - 0.00000000000000000000000203 108.0
DYD3_k127_2438245_6 lactoylglutathione lyase activity K00941,K01724,K01759,K07032,K08234 - 2.7.1.49,2.7.4.7,4.2.1.96,4.4.1.5 0.00001903 49.0
DYD3_k127_2441005_0 Ami_3 K01448 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000004864 202.0
DYD3_k127_2448338_0 FAD dependent oxidoreductase K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008384 310.0
DYD3_k127_2448338_1 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000003744 202.0
DYD3_k127_2448338_2 Glycosyltransferase Family 4 K14335 - - 0.0000000000000000000000000000000000000000000000005508 194.0
DYD3_k127_2448338_3 - - - - 0.00000000000000000000001291 104.0
DYD3_k127_2455928_0 Transglycosylase K05366 - 2.4.1.129,3.4.16.4 2.795e-231 738.0
DYD3_k127_2455928_1 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001871 531.0
DYD3_k127_2455928_2 Bacterial protein of unknown function (DUF853) K06915 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004553 524.0
DYD3_k127_2455928_3 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007619 325.0
DYD3_k127_2455928_4 Amidohydrolase family K12960,K20810 - 3.5.4.28,3.5.4.31,3.5.4.40 0.0000000000000000000000000000000000000000000000000000001696 203.0
DYD3_k127_2455928_5 Aminotransferase class-V - - - 0.000000000000000000009764 96.0
DYD3_k127_2457918_0 NAD(P)H-binding - - - 0.00000000000000000000000000000000000000000000003938 177.0
DYD3_k127_2457918_1 Domain of unknown function (DUF4260) - - - 0.00000000000000000000000000000000000007935 146.0
DYD3_k127_2457918_2 - - - - 0.000000002141 70.0
DYD3_k127_2457918_4 Transcription factor zinc-finger K09981 - - 0.00003085 56.0
DYD3_k127_2457918_5 DinB family - - - 0.00005511 53.0
DYD3_k127_2464874_0 HI0933-like protein K07007 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003258 470.0
DYD3_k127_2464874_1 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 377.0
DYD3_k127_2464874_2 Domain of unknown function (DU1801) - - - 0.0000000000000000000003987 100.0
DYD3_k127_247295_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004031 272.0
DYD3_k127_247295_1 Aerotolerance regulator N-terminal - - - 0.0000000001282 70.0
DYD3_k127_2493769_0 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006847 466.0
DYD3_k127_2493769_1 Dienelactone hydrolase family K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001366 282.0
DYD3_k127_2493769_2 Multicopper oxidase - - - 0.000000000000000000000000000000000000000000000000818 178.0
DYD3_k127_2493769_3 Putative lumazine-binding - - - 0.00000000000000000000000000000000006782 139.0
DYD3_k127_2496438_0 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004817 330.0
DYD3_k127_2496438_1 glyoxalase bleomycin resistance protein dioxygenase K07104 - 1.13.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000008153 256.0
DYD3_k127_2496438_2 Clp protease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009135 247.0
DYD3_k127_2496438_3 PFAM Fe-S metabolism associated K02426 - - 0.000000000000000000000000000000005722 132.0
DYD3_k127_2496438_4 Protein of unknown function (DUF664) - - - 0.00000000000000000000000000000009679 133.0
DYD3_k127_2496438_5 - - - - 0.000000000000001277 81.0
DYD3_k127_2496438_6 Endoribonuclease L-PSP - - - 0.00003191 53.0
DYD3_k127_2503335_0 Vacuole effluxer Atg22 like K06902 - - 0.0000000000000000000000000000000000000000000000000000000004376 213.0
DYD3_k127_2503335_1 membrane protein TerC K05794 - - 0.000000000000000000000000000000000000000000000005932 176.0
DYD3_k127_2503335_2 Enoyl-(Acyl carrier protein) reductase K07124 - - 0.000000000000000000000000000000000000000000007657 178.0
DYD3_k127_253227_0 Poly A polymerase, head domain K00970 - 2.7.7.19 0.000000000000000000000000000000000000000000000000000001389 205.0
DYD3_k127_253227_1 - - - - 0.0003485 46.0
DYD3_k127_2585889_0 choline dehydrogenase activity K03333 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0009405,GO:0016491,GO:0016614,GO:0016899,GO:0016995,GO:0044419,GO:0051704,GO:0055114 1.1.3.6 4.018e-240 753.0
DYD3_k127_2585889_1 Threonine aldolase K01620 - 4.1.2.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004546 403.0
DYD3_k127_2585889_2 Phosphate acyltransferases K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000002708 276.0
DYD3_k127_2585889_3 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000001077 93.0
DYD3_k127_2585889_4 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.0000000001062 64.0
DYD3_k127_2597857_0 PFAM CBS domain K03699 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009163 352.0
DYD3_k127_2597857_1 Aminotransferase class-V K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000001526 225.0
DYD3_k127_2615691_0 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001644 315.0
DYD3_k127_2643435_0 3-phosphoshikimate 1-carboxyvinyltransferase activity K00800 GO:0003674,GO:0003824,GO:0003866,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016765,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0071704,GO:0071944,GO:1901576 2.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003052 375.0
DYD3_k127_2643435_1 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 0.000000000000000000000000000000000000000000001235 170.0
DYD3_k127_2643435_2 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.00000000000000000000000000000000001546 157.0
DYD3_k127_2643435_3 cheY-homologous receiver domain - - - 0.00000000000000000000000000004807 120.0
DYD3_k127_2643435_4 Prepilin-type N-terminal cleavage methylation domain K02456,K02650 - - 0.00002236 56.0
DYD3_k127_2644155_0 Belongs to the FGGY kinase family K00851 - 2.7.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004682 386.0
DYD3_k127_2644155_1 ribose 5-phosphate isomerase B K01808 - 5.3.1.6 0.0000000000000000000000000000002568 138.0
DYD3_k127_2644155_2 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.0000000000000000000005699 109.0
DYD3_k127_2656277_0 Cytochrome C oxidase, cbb3-type, subunit III K00368 - 1.7.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006398 276.0
DYD3_k127_2656277_1 - - - - 0.0000000000000000000000000000000000000002028 156.0
DYD3_k127_2656277_2 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor - - - 0.0000000000000000002215 97.0
DYD3_k127_2656277_3 serine threonine protein kinase K08282,K08884,K12132 - 2.7.11.1 0.000000004266 64.0
DYD3_k127_2656277_4 conserved protein (DUF2249) - - - 0.000006811 58.0
DYD3_k127_2657085_0 Putative zinc-binding metallo-peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004961 456.0
DYD3_k127_2657085_1 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004913 440.0
DYD3_k127_2657085_2 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.000000000000000000000000000000000000000000007427 173.0
DYD3_k127_2657085_3 Acyl-CoA oxidase K00232 - 1.3.3.6 0.00000000003591 69.0
DYD3_k127_2670832_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 1.187e-275 867.0
DYD3_k127_2670832_1 Riboflavin kinase K11753 - 2.7.1.26,2.7.7.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002034 308.0
DYD3_k127_2670832_2 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0030312,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.0000000000000000000000000000000000000000000000009985 189.0
DYD3_k127_2670832_3 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.0000000000000000000000000000000000000000009804 177.0
DYD3_k127_2670832_4 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.0000000000000000002699 104.0
DYD3_k127_2670832_5 Protein of unknown function (DUF503) K09764 - - 0.00000000003529 66.0
DYD3_k127_2674074_0 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009864 267.0
DYD3_k127_2674074_1 lactoylglutathione lyase activity - - - 0.00000000000000000000000000000000000000000000000000004573 189.0
DYD3_k127_2674074_2 methylamine metabolic process K15977 - - 0.00000000000000000000000000000000000000000000000000004737 193.0
DYD3_k127_2674074_3 DinB family - - - 0.0000000000000000000002264 102.0
DYD3_k127_2674074_4 Zn-dependent hydrolases of the beta-lactamase fold - - - 0.0000000000000009837 85.0
DYD3_k127_2685668_0 Bacterial regulatory protein, Fis family - - - 6.181e-218 687.0
DYD3_k127_2685668_1 Chain length determinant protein K16554 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002524 586.0
DYD3_k127_2685668_2 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009424 265.0
DYD3_k127_2685668_3 diguanylate cyclase K21020 - 2.7.7.65 0.00000000000000000000003428 111.0
DYD3_k127_2685668_4 - - - - 0.0000001804 64.0
DYD3_k127_2686223_0 Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002958 311.0
DYD3_k127_2686223_1 Iron-sulfur cluster-binding domain - - - 0.000000000000000000000000000004812 121.0
DYD3_k127_2686223_2 glycosyl transferase family 2 - - - 0.000000000000000000000000004171 114.0
DYD3_k127_2686223_3 TQO small subunit DoxD K16937 - 1.8.5.2 0.0005335 50.0
DYD3_k127_2691915_0 Peptidase family M50 K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000001858 249.0
DYD3_k127_2691915_1 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.00000000001761 66.0
DYD3_k127_2709001_0 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003022 483.0
DYD3_k127_2709001_1 COG0477 Permeases of the major facilitator superfamily - - - 0.000000000000000000000000000000006443 134.0
DYD3_k127_2711836_0 peptidase M42 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001866 387.0
DYD3_k127_2711836_1 PFAM periplasmic binding protein K02016 - - 0.0000000000000000000000000000000000000000000000000000000000000000004917 241.0
DYD3_k127_2711836_2 HEAT repeats - - - 0.00000000000000000000000000001817 135.0
DYD3_k127_272955_0 Isocitrate/isopropylmalate dehydrogenase K00030 - 1.1.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 433.0
DYD3_k127_272955_1 Acyl-CoA dehydrogenase, C-terminal domain K00252 - 1.3.8.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007171 432.0
DYD3_k127_272955_2 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000108 235.0
DYD3_k127_272955_3 SprT-like family - - - 0.000000000000000000000000000000000000000000002979 173.0
DYD3_k127_272955_4 Domain of unknown function (DUF4139) - - - 0.0000000000000000000000001307 123.0
DYD3_k127_2729772_0 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001887 475.0
DYD3_k127_2729772_1 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000001725 207.0
DYD3_k127_2729772_2 L-carnitine dehydratase bile acid-inducible protein F - - - 0.0003314 43.0
DYD3_k127_2730804_0 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004945 325.0
DYD3_k127_2730804_1 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003152 311.0
DYD3_k127_2730804_2 Phosphate transport system permease protein PstA K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005268 302.0
DYD3_k127_2730804_3 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000006006 123.0
DYD3_k127_2738106_0 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002698 253.0
DYD3_k127_2738106_1 Heat shock 70 kDa protein K04043 - - 0.00000000000000000000000000000000000000000000000000000000000424 213.0
DYD3_k127_2738106_2 Transcriptional regulator, MerR family K13640 GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000000000000000000000000000000176 151.0
DYD3_k127_2738106_3 Belongs to the peptidase M48B family K03799 - - 0.0000000000000000000000002252 107.0
DYD3_k127_2746048_0 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008753 351.0
DYD3_k127_2746048_1 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate K07106 - 4.2.1.126 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002668 308.0
DYD3_k127_2746048_2 Glycosyl hydrolase family 3 N terminal domain K05349 - 3.2.1.21 0.00000000000000000000000000000000000000000000000000000000000000000001007 254.0
DYD3_k127_2746220_0 Acetyl-coenzyme A synthetase N-terminus K01907 - 6.2.1.16 7.656e-227 719.0
DYD3_k127_2746220_1 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007965 541.0
DYD3_k127_2746220_10 Telomere recombination K07566 - 2.7.7.87 0.000000000000000000000000000000000000000000000000000046 199.0
DYD3_k127_2746220_11 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 - 2.7.7.60 0.00000000000000000000000000000000000000000000000001685 189.0
DYD3_k127_2746220_12 Low molecular weight phosphatase family K01104 - 3.1.3.48 0.0000000000000000000000000000000000000121 154.0
DYD3_k127_2746220_13 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.0000000000000000000000000000000000001533 154.0
DYD3_k127_2746220_14 Phosphoribosyl transferase domain - - - 0.00000000000000000000008864 112.0
DYD3_k127_2746220_15 TonB-dependent Receptor Plug Domain - - - 0.000000000000000000124 104.0
DYD3_k127_2746220_16 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits - - - 0.00000000000000844 76.0
DYD3_k127_2746220_2 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001752 526.0
DYD3_k127_2746220_3 isocitrate dehydrogenase activity K00031 GO:0003674,GO:0003824,GO:0003862,GO:0004448,GO:0004450,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006091,GO:0006520,GO:0006551,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0022900,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0050896,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003332 532.0
DYD3_k127_2746220_4 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003269 431.0
DYD3_k127_2746220_5 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001204 422.0
DYD3_k127_2746220_6 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003608 266.0
DYD3_k127_2746220_7 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000002009 237.0
DYD3_k127_2746220_8 Domain of unknown function (DUF1732) - - - 0.000000000000000000000000000000000000000000000000000000000006618 218.0
DYD3_k127_2746220_9 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.0000000000000000000000000000000000000000000000000000000343 205.0
DYD3_k127_2767631_0 Glycosyl hydrolase 36 superfamily, catalytic domain K13688 - - 0.0 1961.0
DYD3_k127_2769988_0 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004364 272.0
DYD3_k127_2769988_1 TIGRFAM death-on-curing family protein K07341 - - 0.0000000000000000001225 94.0
DYD3_k127_2779513_0 Sigma-54 factor, Activator interacting domain (AID) K03092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004169 451.0
DYD3_k127_2779513_1 ABC transporter K06861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 412.0
DYD3_k127_2782200_0 Lipoate-protein ligase K03800 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0016740,GO:0016746,GO:0016747,GO:0016772,GO:0016779,GO:0016874,GO:0016879,GO:0016979,GO:0017118,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:0140096,GO:1901564 6.3.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005329 379.0
DYD3_k127_2782200_1 Trypsin K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000004424 232.0
DYD3_k127_2782200_2 heme binding - - - 0.000000000000000000000000000000000000000000000000001173 188.0
DYD3_k127_2793049_0 CO dehydrogenase flavoprotein domain protein K03519 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000002668 243.0
DYD3_k127_2793049_1 2Fe-2S -binding domain protein K03518,K07302,K19819 - 1.2.5.3,1.3.99.16,1.5.99.4 0.000000000000000000000000000000000000000000000000000001391 210.0
DYD3_k127_2793049_2 Cupin 2, conserved barrel domain protein - - - 0.000000009442 61.0
DYD3_k127_2816830_0 dioxygenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004044 366.0
DYD3_k127_2816830_1 PFAM LemA family K03744 - - 0.00000000000000000000000000000000000000000000000001269 188.0
DYD3_k127_2816830_2 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.0000000000000000000000000006929 116.0
DYD3_k127_2834837_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.0 1062.0
DYD3_k127_2834837_1 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 2.037e-213 669.0
DYD3_k127_2834837_2 Phosphate transporter family K03306 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005616 397.0
DYD3_k127_2834837_3 Protein of unknown function DUF47 K07220 - - 0.0000000000000000000000000000000000000000000000001801 203.0
DYD3_k127_2834837_4 Protein of unknown function (DUF1343) - - - 0.000000000000000000000000000000000001658 143.0
DYD3_k127_2834837_5 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.0000000000000000000000000000000002121 145.0
DYD3_k127_2834837_6 - - - - 0.000000000000006216 79.0
DYD3_k127_2842668_0 fad dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 317.0
DYD3_k127_2842668_1 endonuclease activity - - - 0.000000146 55.0
DYD3_k127_2843146_0 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 592.0
DYD3_k127_2852141_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 527.0
DYD3_k127_2852141_1 COG1651 Protein-disulfide isomerase - - - 0.0000000000000000000000000000000000000000000000000002863 191.0
DYD3_k127_2858285_0 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000167 467.0
DYD3_k127_2858285_1 Carbamoyl-phosphate synthase small chain, CPSase domain K01956 - 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 459.0
DYD3_k127_2858285_2 Fumarate reductase flavoprotein C-term K00239 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 399.0
DYD3_k127_2858285_3 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002822 376.0
DYD3_k127_2858285_4 - K00241 - - 0.00000000000000000000000000000000000000000000000000000000000001922 222.0
DYD3_k127_2858285_5 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K05788 - - 0.0000000000000000000000000000000000000000000006163 168.0
DYD3_k127_2858285_6 MoaE protein K03635 - 2.8.1.12 0.0000000000000000000000000000000004365 140.0
DYD3_k127_2858285_7 PFAM type II secretion system protein E K02283,K03609 - - 0.0000000000001418 77.0
DYD3_k127_2858285_8 ThiS family K03636 - - 0.0000000000351 68.0
DYD3_k127_2858285_9 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily K03216 - 2.1.1.207 0.00000002482 61.0
DYD3_k127_2869302_0 Belongs to the NiFe NiFeSe hydrogenase large subunit family K06281 - 1.12.99.6 1.375e-234 740.0
DYD3_k127_2869302_1 Telomere recombination K04656 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008054 541.0
DYD3_k127_2869302_2 small subunit K06282 - 1.12.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 411.0
DYD3_k127_2869302_3 CobW/HypB/UreG, nucleotide-binding domain K04652 - - 0.0000000000000000000000000000000000000000000000000000000000000000002066 238.0
DYD3_k127_2869302_4 respiratory electron transport chain K03620 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006113,GO:0008150,GO:0008152,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0020037,GO:0031224,GO:0031226,GO:0032991,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0044569,GO:0045333,GO:0046906,GO:0048037,GO:0055114,GO:0071944,GO:0097159,GO:1901363,GO:1902494 - 0.000000000000000000000000000000000000000000000000153 201.0
DYD3_k127_2869302_5 PFAM peptidase M52 hydrogen uptake protein K03605 - - 0.00000000000000000000000000000000007198 141.0
DYD3_k127_2869302_6 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K03385 - 1.7.2.2 0.0000000000007236 81.0
DYD3_k127_2876453_0 GMC oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001157 298.0
DYD3_k127_2876453_1 Belongs to the glycosyl hydrolase 1 family K05350 - 3.2.1.21 0.00000002203 57.0
DYD3_k127_2877307_0 Heavy-metal-associated domain K01533,K17686 - 3.6.3.4,3.6.3.54 1.709e-283 890.0
DYD3_k127_2877307_1 ketosteroid isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002757 387.0
DYD3_k127_2877307_2 - - - - 0.000000000000000000000000000000000000000000000001954 188.0
DYD3_k127_2877307_3 Metal-sensitive transcriptional repressor K21600 - - 0.0000000000000000000000000000000000001233 151.0
DYD3_k127_2877307_4 Cupredoxin-like domain - - - 0.0000000000000002844 81.0
DYD3_k127_2877307_5 E1-E2 ATPase K01533,K17686 - 3.6.3.4,3.6.3.54 0.000000000001046 68.0
DYD3_k127_288933_0 Beta-eliminating lyase K00639 - 2.3.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002449 573.0
DYD3_k127_288933_1 Zinc-binding dehydrogenase K00060 - 1.1.1.103 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003213 309.0
DYD3_k127_288933_2 Methylpurine-DNA glycosylase (MPG) K03652 - 3.2.2.21 0.000000000000000000000000000000000000000000000006148 183.0
DYD3_k127_2894981_0 P2 response regulator binding domain K03407 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004589 374.0
DYD3_k127_2894981_1 CheC-like family K03410 - - 0.000000000000000000000000000000000000000000000000000000004536 222.0
DYD3_k127_2894981_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000004718 193.0
DYD3_k127_290591_0 RibD C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004889 326.0
DYD3_k127_290591_1 Phosphodiester glycosidase - - - 0.00000000000000000000000000000000000000000000000001586 192.0
DYD3_k127_290591_2 Metal-dependent hydrolase - - - 0.000000000000000000000000000000000000000005514 156.0
DYD3_k127_290591_3 Glyoxalase-like domain - - - 0.00003421 55.0
DYD3_k127_2906157_0 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002895 403.0
DYD3_k127_2906157_1 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002465 390.0
DYD3_k127_2906157_10 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006417,GO:0006448,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015935,GO:0017148,GO:0019222,GO:0022626,GO:0022627,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0043021,GO:0043022,GO:0043024,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0045900,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:1990904,GO:2000112,GO:2000113 - 0.00002377 55.0
DYD3_k127_2906157_2 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004919 301.0
DYD3_k127_2906157_3 PTS system sorbose subfamily IIB component K19507 - - 0.0000000000000000000000000000000000000000000002855 177.0
DYD3_k127_2906157_4 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.00000000000000000000000000000000000001669 149.0
DYD3_k127_2906157_5 PTS system mannose/fructose/sorbose family IID component K02796 - - 0.000000000000000000000000001365 128.0
DYD3_k127_2906157_6 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000001239 105.0
DYD3_k127_2906157_7 PTS system sorbose-specific iic component K02795 - - 0.000000000000000000003828 105.0
DYD3_k127_2906157_8 phosphocarrier protein Hpr K11189 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000516 96.0
DYD3_k127_2906157_9 PTS system fructose IIA component K02744 - - 0.00000000000000278 81.0
DYD3_k127_2910902_0 PFAM Prenyltransferase squalene oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004625 368.0
DYD3_k127_2910902_2 peroxiredoxin activity K01607 - 4.1.1.44 0.000000000000001189 81.0
DYD3_k127_2910902_3 Binding-protein-dependent transport system inner membrane component K02033 - - 0.00005876 49.0
DYD3_k127_2929163_0 COG2818 3-methyladenine DNA glycosylase K01246 - 3.2.2.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000002156 285.0
DYD3_k127_2929163_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001607 291.0
DYD3_k127_2929163_2 PFAM Alcohol dehydrogenase, zinc-binding K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000009574 202.0
DYD3_k127_2929163_3 NAD(P)H quinone oxidoreductase, PIG3 family - - - 0.00000000000000000000000000164 118.0
DYD3_k127_2929163_4 Bacterial DNA polymerase III alpha subunit K14162 - 2.7.7.7 0.00000000007727 70.0
DYD3_k127_2936232_0 ABC transporter K06158 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008042 585.0
DYD3_k127_2936232_1 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal K00457 - 1.13.11.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009015 565.0
DYD3_k127_2936232_2 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002347 499.0
DYD3_k127_2936232_3 Phenylalanine-4-hydroxylase K00500 GO:0003674,GO:0003824,GO:0004497,GO:0004505,GO:0006082,GO:0006520,GO:0006558,GO:0006559,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009987,GO:0016054,GO:0016491,GO:0016705,GO:0016714,GO:0017144,GO:0019439,GO:0019752,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1902221,GO:1902222 1.14.16.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004433 478.0
DYD3_k127_2936232_4 homogentisate 1,2-dioxygenase K00451 - 1.13.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001975 371.0
DYD3_k127_2936232_5 PFAM Integral membrane protein TerC - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004869 297.0
DYD3_k127_2936232_6 Methyltransferase - - - 0.0000000000000000000000000000000000000000000002566 177.0
DYD3_k127_2937964_0 Pyridoxal-dependent decarboxylase conserved domain K01593 - 4.1.1.105,4.1.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005894 461.0
DYD3_k127_2937964_1 Oxidoreductase molybdopterin binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004908 308.0
DYD3_k127_2937964_2 Prokaryotic cytochrome b561 - - - 0.0000000000000000000000000000000000000007679 151.0
DYD3_k127_2963081_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 1.792e-214 696.0
DYD3_k127_2963081_1 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003186 540.0
DYD3_k127_2963081_10 Regulatory protein, FmdB family - - - 0.0000000000000000001386 92.0
DYD3_k127_2963081_11 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.000000001097 59.0
DYD3_k127_2963081_12 Late competence development protein ComFB - - - 0.00000008835 65.0
DYD3_k127_2963081_2 Arginyl-tRNA synthetase K01887 - 6.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009116 501.0
DYD3_k127_2963081_3 Fructose-1-6-bisphosphatase, N-terminal domain K03841 - 3.1.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004882 397.0
DYD3_k127_2963081_4 pfkB family carbohydrate kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002899 345.0
DYD3_k127_2963081_5 AIR synthase related protein, C-terminal domain K01933 - 6.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001792 347.0
DYD3_k127_2963081_6 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002297 323.0
DYD3_k127_2963081_7 Competence protein K02238 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005821 319.0
DYD3_k127_2963081_8 Lumazine binding domain K00793 - 2.5.1.9 0.0000000000000000000000000000000000000000000000000000000006086 220.0
DYD3_k127_2963081_9 - - - - 0.0000000000000000000000005653 117.0
DYD3_k127_2969517_0 Transcriptional regulator K12146,K15836 GO:0000976,GO:0000984,GO:0001017,GO:0001067,GO:0001150,GO:0001158,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016043,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0022607,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031334,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0035326,GO:0042802,GO:0043170,GO:0043254,GO:0043565,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045893,GO:0045935,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0060255,GO:0065003,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2000142,GO:2000144,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002428 402.0
DYD3_k127_2969517_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006927 389.0
DYD3_k127_2969517_2 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 369.0
DYD3_k127_2969517_3 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000232 296.0
DYD3_k127_2969517_4 Secretion protein K01993 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008087 273.0
DYD3_k127_2995685_0 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001223 291.0
DYD3_k127_2995685_1 Cold shock protein domain K03704 - - 0.000000000000000000000000000289 118.0
DYD3_k127_2995685_2 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.0000000000000000000001358 98.0
DYD3_k127_2995685_3 Putative stress-induced transcription regulator - - - 0.0000006803 55.0
DYD3_k127_3029541_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 4.629e-250 791.0
DYD3_k127_3029541_1 protein secretion K21449 - - 0.00000000000000000009281 95.0
DYD3_k127_3029541_2 elongation factor SelB, winged helix K03833 - - 0.000005509 50.0
DYD3_k127_3035842_0 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001936 304.0
DYD3_k127_3035842_1 Belongs to the GHMP kinase family. GalK subfamily K00849 - 2.7.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000385 256.0
DYD3_k127_3035842_2 Participates in the control of copper homeostasis K06201 - - 0.00000000000000000000000000000000001539 151.0
DYD3_k127_3035842_3 PFAM glycosyl transferase family 9 K02843 - - 0.00000000000000000000000935 107.0
DYD3_k127_3035842_4 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.0000000007819 62.0
DYD3_k127_3036190_0 Major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003474 403.0
DYD3_k127_3036190_1 Uncharacterised protein family UPF0066 - - - 0.0000000000000000000000000000000000000000000000001463 182.0
DYD3_k127_3036190_2 - - - - 0.000000000000000000000000005361 117.0
DYD3_k127_3036190_3 N,N-dimethylaniline monooxygenase activity - - - 0.000000000000004059 83.0
DYD3_k127_3068083_0 malic enzyme K00027,K00029,K00625,K13788 GO:0003674,GO:0003824,GO:0004470,GO:0004473,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0030145,GO:0043167,GO:0043169,GO:0046872,GO:0046914,GO:0055114 1.1.1.38,1.1.1.40,2.3.1.8 2.393e-254 805.0
DYD3_k127_3068083_1 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 2.758e-227 716.0
DYD3_k127_3068083_2 Aldehyde dehydrogenase family K00154 - 1.2.1.68 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000454 439.0
DYD3_k127_3068083_3 Metal dependent phosphohydrolases with conserved 'HD' motif. K06885 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008292 438.0
DYD3_k127_3068083_4 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001557 333.0
DYD3_k127_3068083_5 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000000000000001443 228.0
DYD3_k127_3068083_6 diguanylate cyclase K02488 - 2.7.7.65 0.000000000000000000000000000000000000000000000000000001316 209.0
DYD3_k127_3068083_7 Domain of unknown function (DUF4281) - - - 0.00000000000000000000000632 107.0
DYD3_k127_3068083_8 Zn-dependent protease - - - 0.000000005186 66.0
DYD3_k127_3069252_0 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases K09461 - 1.14.13.40 1.776e-253 826.0
DYD3_k127_3069252_1 NADH oxidase - - - 5.807e-194 616.0
DYD3_k127_3069252_2 - - - - 0.00000000000000000000000000000000000000000003627 168.0
DYD3_k127_3070742_0 Nucleoside H+ symporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004664 562.0
DYD3_k127_3070742_1 Domain of Unknown Function (DUF1080) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002863 274.0
DYD3_k127_3070742_2 Serine/threonine phosphatases, family 2C, catalytic domain K01090,K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000007313 229.0
DYD3_k127_3070742_3 PFAM Glyoxalase bleomycin resistance protein dioxygenase K06996 - - 0.00000000000000000000000000000000000000000000000000000000202 209.0
DYD3_k127_3091475_0 Belongs to the MenA family. Type 1 subfamily K02548 - 2.5.1.74 0.00000000000000000000000000000000000000000000000000000000000000007159 233.0
DYD3_k127_3092267_0 DNA polymerase beta thumb K02347 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003427 594.0
DYD3_k127_3092267_1 EamA-like transporter family - - - 0.0000000000000000000000000000000008345 135.0
DYD3_k127_3092267_2 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000004264 82.0
DYD3_k127_3092267_3 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.00000000006987 71.0
DYD3_k127_3092267_4 Helix-hairpin-helix domain - - - 0.0003641 43.0
DYD3_k127_3102229_0 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003064 521.0
DYD3_k127_3102229_1 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003367 513.0
DYD3_k127_3141784_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 - 6.1.1.15 2.771e-215 677.0
DYD3_k127_3141784_1 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 8.47e-201 637.0
DYD3_k127_3141784_2 NAD(P)-binding Rossmann-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002291 535.0
DYD3_k127_3141784_3 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008836,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016829,GO:0016830,GO:0016831,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046451,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005933 383.0
DYD3_k127_3141784_4 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000008441 101.0
DYD3_k127_3141784_5 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 - 6.1.1.15 0.00004754 45.0
DYD3_k127_316038_0 LytB protein K03527 - 1.17.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 517.0
DYD3_k127_316038_1 Thioesterase superfamily K07107 - - 0.0000000000000000000000004894 111.0
DYD3_k127_3162366_0 Beta-eliminating lyase K00639,K00652 GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 2.3.1.29,2.3.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009316 480.0
DYD3_k127_3193346_0 Nucleotidyl transferase K00971 - 2.7.7.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005589 325.0
DYD3_k127_3193346_1 Sugar nucleotidyl transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000226 240.0
DYD3_k127_3193346_2 PFAM beta-lactamase domain protein - - - 0.000000000000000000000000000000000000002547 163.0
DYD3_k127_3193346_3 - - - - 0.000000000000305 77.0
DYD3_k127_3207939_0 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor - - - 0.000000000000000000000000000000000000000000000004023 189.0
DYD3_k127_3207939_1 Transcriptional regulator - - - 0.0000000000000000000000000000000001782 141.0
DYD3_k127_3207939_2 Tetratricopeptide repeat - - - 0.000000000000422 80.0
DYD3_k127_325743_0 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000001781 258.0
DYD3_k127_325743_1 Domain of unknown function (DUF4287) - - - 0.0000000000000000000001006 98.0
DYD3_k127_326568_0 COG1226 Kef-type K transport systems - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001977 288.0
DYD3_k127_326568_1 NmrA-like family - - - 0.0000000000000000000000000000000000000001173 155.0
DYD3_k127_3273273_0 Flavin containing amine oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006413 283.0
DYD3_k127_3273273_1 COG0671 Membrane-associated phospholipid phosphatase - - - 0.000000000000000000000000000000000000000000000000000000001067 217.0
DYD3_k127_3273273_2 Belongs to the GSP D family K02280 - - 0.00000000000000000000000000000000000000000000000000001578 203.0
DYD3_k127_3273273_3 oligosaccharyl transferase activity - - - 0.0000000000000000000000000000000000000000000000000001189 205.0
DYD3_k127_3273273_4 PFAM SAF domain K02279 - - 0.00000000000000000000000000000000000000000000000001231 190.0
DYD3_k127_3273273_5 Type IV leader peptidase family K02278 - 3.4.23.43 0.000000000000009557 81.0
DYD3_k127_3273273_6 TadE-like protein - - - 0.0000000002302 72.0
DYD3_k127_3273273_7 PFAM Flp Fap pilin component K02651 - - 0.000001164 53.0
DYD3_k127_3276485_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 1.026e-214 675.0
DYD3_k127_3276485_1 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.000000000000000000000000000000000000000000000000000000000000003206 241.0
DYD3_k127_3276485_2 Sodium:neurotransmitter symporter family - - - 0.0000000000000000000000000000000000000000000000000000000000006854 214.0
DYD3_k127_3276485_3 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.0000000000000000000000000000000323 130.0
DYD3_k127_3276485_4 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000009328 86.0
DYD3_k127_3276485_5 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.00000003899 57.0
DYD3_k127_3284386_0 Type IV pilus assembly protein PilM; K02662 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002659 440.0
DYD3_k127_3284386_1 AMIN domain K02666 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 443.0
DYD3_k127_3284386_2 Fimbrial assembly protein (PilN) - - - 0.0000000000000000000000000000001051 138.0
DYD3_k127_3284386_3 - - - - 0.0000000000000003061 91.0
DYD3_k127_3284386_4 Pilus assembly protein, PilO K02664 - - 0.000000000000000777 90.0
DYD3_k127_3284386_5 - - - - 0.000005307 51.0
DYD3_k127_3295009_0 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000002376 228.0
DYD3_k127_3295009_1 Domain of unknown function (DU1801) - - - 0.0000000000000000000000000000002815 126.0
DYD3_k127_3296435_0 An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism K01961 - 6.3.4.14,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002074 591.0
DYD3_k127_3296435_1 Type II/IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001371 498.0
DYD3_k127_3296435_2 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.000000000000000000000000000000009527 130.0
DYD3_k127_3296435_3 2-phosphosulpholactate phosphatase K05979 - 3.1.3.71 0.000000000000000000000002013 107.0
DYD3_k127_3304092_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 9.15e-238 767.0
DYD3_k127_3304092_1 Peptidase, M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004401 349.0
DYD3_k127_3304092_2 Serine/Threonine protein kinases, catalytic domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004197 330.0
DYD3_k127_3304092_3 - - - - 0.00000000000000000000000000000000000000000000000000004955 201.0
DYD3_k127_3304092_4 Sugar-specific transcriptional regulator TrmB - - - 0.00000000001753 77.0
DYD3_k127_331148_0 GMC oxidoreductase - - - 3.488e-277 868.0
DYD3_k127_331148_1 GMC oxidoreductase - - - 4.233e-218 726.0
DYD3_k127_331148_2 Sodium:solute symporter family - - - 2.107e-210 667.0
DYD3_k127_331148_3 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007752 499.0
DYD3_k127_331148_4 Xylose isomerase-like TIM barrel K01816 - 5.3.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 306.0
DYD3_k127_331148_5 Xylose isomerase-like TIM barrel - - - 0.00000000000000000000000000000000000000000000000000000000000000006133 246.0
DYD3_k127_331148_6 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon - - - 0.00000000000000000000000000000000000000000000000000000001308 223.0
DYD3_k127_331148_7 Gluconate 2-dehydrogenase subunit 3 - - - 0.000000000000000000000000000000000000000000000000003152 199.0
DYD3_k127_331148_8 Oxidoreductase domain protein - - - 0.00000000000000000000000000000000000000026 153.0
DYD3_k127_331148_9 Gluconate 2-dehydrogenase subunit 3 - - - 0.00000000000000007339 91.0
DYD3_k127_3313743_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003199 563.0
DYD3_k127_3313743_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K01993,K16922 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002017 429.0
DYD3_k127_3313743_2 PFAM Bacterial transcriptional activator domain - - - 0.0000000000000000000000000000000000000000000000000000000000296 230.0
DYD3_k127_3321472_0 Bacterial transcriptional activator domain K12132 - 2.7.11.1 0.0000000000000000000000000003138 130.0
DYD3_k127_3325931_1 PFAM transposase IS4 family protein - - - 0.0000003918 62.0
DYD3_k127_3346840_0 PFAM Cys Met metabolism pyridoxal-phosphate-dependent K01761 - 4.4.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006339 552.0
DYD3_k127_3346840_1 Catalyzes the attachment of glycine to tRNA(Gly) K01880 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000002394 208.0
DYD3_k127_3346840_2 Zincin-like metallopeptidase - - - 0.0000000000004587 82.0
DYD3_k127_3347698_0 secondary active sulfate transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007735 548.0
DYD3_k127_3347698_1 bifunctional purine biosynthesis protein purh K00602 GO:0003674,GO:0003824,GO:0004643,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016742,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.2.3,3.5.4.10 0.000000000000000000000000000236 115.0
DYD3_k127_3381932_0 Sodium/hydrogen exchanger family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 311.0
DYD3_k127_3381932_1 NhaP-type Na H and K H - - - 0.00000000000000000000000000000000000000000000000000000003481 213.0
DYD3_k127_3381932_2 - - - - 0.0000000000000000000000000000000002057 134.0
DYD3_k127_3381932_3 - - - - 0.00000000000000000005986 92.0
DYD3_k127_3381932_4 - - - - 0.00000004294 59.0
DYD3_k127_3394128_0 Phosphotransfer between the C1 and C5 carbon atoms of pentose K01839 - 5.4.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002188 473.0
DYD3_k127_3394128_1 MazG nucleotide pyrophosphohydrolase domain K02428 - 3.6.1.66 0.0000000000000000000000000000000000000000000000000000000000000000001009 239.0
DYD3_k127_3394128_2 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0000000000000000000000000000000000000000000000000000000112 211.0
DYD3_k127_3394128_3 This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis K01489 - 3.5.4.5 0.000000000000000000000000000005336 128.0
DYD3_k127_3394128_4 - - - - 0.0000000007108 72.0
DYD3_k127_3395010_0 cobalamin-transporting ATPase activity K02014,K16092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005461 410.0
DYD3_k127_3395010_1 Elongation factor SelB winged helix 3 K03833 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002116 284.0
DYD3_k127_3395010_2 Involved in DNA repair and RecF pathway recombination K03584 - - 0.00000000000000000000000000000000000000001492 169.0
DYD3_k127_3395010_3 amine dehydrogenase activity - - - 0.0000000000000000002258 100.0
DYD3_k127_3396865_0 FAD linked oxidases, C-terminal domain K18930 - - 2.507e-307 970.0
DYD3_k127_3396865_1 ATP-independent chaperone mediated protein folding - - - 0.0000000000000000000000000732 114.0
DYD3_k127_3396865_2 HxlR-like helix-turn-helix - - - 0.000000000000000009377 91.0
DYD3_k127_3416287_0 TIGRFAM phenazine biosynthesis protein PhzF family K06998 - 5.3.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001568 360.0
DYD3_k127_3416287_2 Alpha/beta hydrolase family K01259 - 3.4.11.5 0.0000000000001338 74.0
DYD3_k127_3428957_0 TonB dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002373 440.0
DYD3_k127_3429266_0 PAS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005957 420.0
DYD3_k127_3429266_1 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003027 347.0
DYD3_k127_3429266_2 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 318.0
DYD3_k127_3429266_3 Transcriptional regulatory protein, C terminal K02483,K07665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002802 322.0
DYD3_k127_3429266_4 MotA/TolQ/ExbB proton channel family K03562 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001866 289.0
DYD3_k127_3429266_5 N-terminal domain of (some) glycogen debranching enzymes - - - 0.0000000000000000000000000000000000000000000000000000000006724 229.0
DYD3_k127_3429266_6 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.0000000000000000000000000000000000000000127 163.0
DYD3_k127_3429266_7 Biopolymer transport protein ExbD/TolR K03559 - - 0.000000000000000000000000000124 119.0
DYD3_k127_3429266_8 PFAM Biopolymer transport protein ExbD TolR K03560 - - 0.0000000000004087 75.0
DYD3_k127_3429590_0 membrane protein (DUF2207) - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 542.0
DYD3_k127_343320_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002496 542.0
DYD3_k127_343320_1 Cytochrome C assembly protein K02195 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000163 255.0
DYD3_k127_343320_2 water channel activity K02440,K06188,K09874 - - 0.000000000000000000000000000000000000000000000000000000001489 209.0
DYD3_k127_343320_3 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000001667 173.0
DYD3_k127_343320_4 Methyltransferase domain - - - 0.000000000000000000000000000000000002502 153.0
DYD3_k127_343320_5 CcmB protein K02194 - - 0.00000000000000000000000000000157 124.0
DYD3_k127_343320_6 PFAM flavin reductase domain protein, FMN-binding - - - 0.0000000000000000000000000001737 121.0
DYD3_k127_3434362_0 Serine/threonine phosphatases, family 2C, catalytic domain K01090,K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000001704 179.0
DYD3_k127_3434362_1 - - - - 0.00000000000000000000000000000000000000000006347 171.0
DYD3_k127_3434362_2 protein kinase activity - - - 0.00000000000000000000000000000001559 128.0
DYD3_k127_3455693_0 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 - 2.1.1.74 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001463 362.0
DYD3_k127_3455693_1 Phage integrase, N-terminal SAM-like domain K03733 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 293.0
DYD3_k127_3455693_2 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.000000000000000000000000000000000000000000000000000000000000000000000009148 252.0
DYD3_k127_3458031_0 heavy metal translocating P-type ATPase K17686 - 3.6.3.54 1.618e-269 840.0
DYD3_k127_3474267_0 Transmembrane secretion effector - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003624 320.0
DYD3_k127_3474267_1 Peptidase family M48 - - - 0.0000000000000000000000000000000000000000000000000001985 194.0
DYD3_k127_3474267_2 Psort location Cytoplasmic, score K00945 - 2.7.4.25 0.0000000000000001356 94.0
DYD3_k127_348912_0 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003178 582.0
DYD3_k127_348912_1 Belongs to the bacterial solute-binding protein 9 family K09818,K11707 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 375.0
DYD3_k127_348912_2 PFAM ABC-3 protein K11709 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 384.0
DYD3_k127_348912_3 PFAM ABC transporter related K11710 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006244 368.0
DYD3_k127_348912_4 ABC 3 transport family K11708 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0010035,GO:0010038,GO:0010043,GO:0016020,GO:0042221,GO:0044464,GO:0050896,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002571 374.0
DYD3_k127_348912_5 Tetratricopeptide repeat - - - 0.00000000000002428 87.0
DYD3_k127_348912_6 SnoaL-like domain - - - 0.000000000594 66.0
DYD3_k127_348912_7 cell adhesion involved in biofilm formation - - - 0.0000003115 62.0
DYD3_k127_3514220_0 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000382 467.0
DYD3_k127_3514220_1 Ferritin Dps family protein K03594 - 1.16.3.1 0.0000000000000000000000000000000000000000003724 162.0
DYD3_k127_3514220_2 Protein of unknown function (DUF3011) - - - 0.0000000000000000000000000000000000000009631 157.0
DYD3_k127_3514220_3 Belongs to the UPF0145 family - - - 0.000000000000000000000000000000000000001205 151.0
DYD3_k127_3514220_4 Transcriptional regulator K07506 - - 0.0000000000000000000002427 104.0
DYD3_k127_3514220_5 - - - - 0.0000000000000000001111 96.0
DYD3_k127_3514220_6 Polyketide cyclase / dehydrase and lipid transport - - - 0.000003229 59.0
DYD3_k127_3533150_0 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005116 436.0
DYD3_k127_3533150_1 FAD linked oxidases, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002197 404.0
DYD3_k127_3533150_2 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000064 327.0
DYD3_k127_3533150_3 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000001578 200.0
DYD3_k127_3533150_4 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.0000000000000000000000000000000000000000000000000002285 191.0
DYD3_k127_3533150_5 - - - - 0.000000000000000000000000000000000000000000000000000374 199.0
DYD3_k127_3533150_6 - - - - 0.000000000000000000000000000000000000000000000007008 191.0
DYD3_k127_3533150_7 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.00000000000000000000000000000000000001811 155.0
DYD3_k127_3533150_8 - - - - 0.000000000000000000000000004056 122.0
DYD3_k127_3541502_0 Anthranilate synthase component I, N terminal region K01657,K01665 - 2.6.1.85,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008765 384.0
DYD3_k127_3541502_1 Formiminotransferase-cyclodeaminase K00603,K01746,K13990 - 2.1.2.5,4.3.1.4 0.000000000000000000000000000000000000000000000000000000000000000000003504 247.0
DYD3_k127_3541502_2 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000006552 253.0
DYD3_k127_3541502_3 with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine K01658,K01664 - 2.6.1.85,4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000001385 240.0
DYD3_k127_3541502_4 Tetratricopeptide TPR_2 repeat protein - - - 0.000000000000000000000000000000000000000000001869 180.0
DYD3_k127_3541502_5 COG0720 6-pyruvoyl-tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000000000697 148.0
DYD3_k127_3541502_6 Pterin 4 alpha carbinolamine dehydratase K01724 - 4.2.1.96 0.00000000000000000000000000000008603 128.0
DYD3_k127_3541502_7 OmpA family - - - 0.00000006841 63.0
DYD3_k127_3549834_0 Creatinase/Prolidase N-terminal domain K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003826 353.0
DYD3_k127_3549834_1 SurA N-terminal domain K03770 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000003547 215.0
DYD3_k127_3549834_2 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.00000000000000000000000000000000000000000000000000005047 190.0
DYD3_k127_3549834_3 Type II/IV secretion system protein K02669 - - 0.000000000000000000000000000000001216 134.0
DYD3_k127_3549834_4 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.0000000000000000000000000000001246 132.0
DYD3_k127_3549834_5 Tetratricopeptide repeat - - - 0.000000000000000003045 99.0
DYD3_k127_3553062_0 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000000000000000000000000003416 201.0
DYD3_k127_3553062_1 Serine threonine protein kinase - - - 0.000000000000000000000000000000000000000000000000004189 204.0
DYD3_k127_3553062_2 3-alpha domain - - - 0.0000000000000000000000000000000000000000000000001047 186.0
DYD3_k127_356094_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 3.909e-317 982.0
DYD3_k127_356094_1 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925,K07102 - 2.7.1.221 0.00000000000000000000000000004541 120.0
DYD3_k127_356094_2 Universal bacterial protein YeaZ K14742 - - 0.0000000000004646 80.0
DYD3_k127_3596606_0 Bacterial transcriptional activator domain - - - 0.0000000000000000000002619 113.0
DYD3_k127_35982_0 AcrB/AcrD/AcrF family K07787,K15726 - - 0.0 1479.0
DYD3_k127_35982_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004316 286.0
DYD3_k127_35982_2 Domain of unknown function (DUF4142) K08995 - - 0.00000000000000000000000000000000000000000000000000000000001371 211.0
DYD3_k127_35982_3 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000003379 186.0
DYD3_k127_3611347_0 POT family K03305 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 507.0
DYD3_k127_3611347_1 histidine kinase A domain protein K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000147 265.0
DYD3_k127_3611347_10 cytochrome c oxidase K02351,K02862 - - 0.0000006516 51.0
DYD3_k127_3611347_11 Esterase PHB depolymerase - - - 0.000003222 49.0
DYD3_k127_3611347_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000614 223.0
DYD3_k127_3611347_3 Glycosyl transferase family 2 K08301 - - 0.000000000000000000000000000000000000000000000000000002552 199.0
DYD3_k127_3611347_4 depolymerase K03932 - - 0.00000000000000000000000000000000000000000000000000008703 195.0
DYD3_k127_3611347_5 Copper chaperone PCu(A)C K03619,K07152,K09796 GO:0003674,GO:0005048,GO:0005488,GO:0033218,GO:0042277 - 0.0000000000000000000000000000000000000000000000002709 197.0
DYD3_k127_3611347_6 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000007699 156.0
DYD3_k127_3611347_7 Sulfite exporter TauE/SafE K07090 - - 0.0000000000000000000000007082 108.0
DYD3_k127_3611347_9 - - - - 0.00000000000000001923 90.0
DYD3_k127_3617490_0 - - - - 0.0000000000000000000000000000000000000000000000000000000009194 215.0
DYD3_k127_3617490_1 Beta-Casp domain K07576 - - 0.000000000000000000002805 94.0
DYD3_k127_3630907_0 DNA polymerase alpha chain like domain K07053 - 3.1.3.97 0.000000000000000000000000000000000000002671 152.0
DYD3_k127_3630907_1 KR domain - - - 0.0000000000000000000000000001434 130.0
DYD3_k127_3630907_2 - - - - 0.0000000000000000000000002371 109.0
DYD3_k127_364971_0 Multicopper oxidase K00368,K22348 - 1.16.3.3,1.7.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000159 423.0
DYD3_k127_364971_1 GCN5-related N-acetyl-transferase K06975 - - 0.00000000000005178 82.0
DYD3_k127_364971_2 translation initiation factor activity K06996 - - 0.000000000004504 79.0
DYD3_k127_364971_3 ketosteroid isomerase - - - 0.0006346 50.0
DYD3_k127_3655007_0 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004439 379.0
DYD3_k127_3655007_1 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.00000000000000000000000000000001854 130.0
DYD3_k127_3655007_2 Psort location Cytoplasmic, score - - - 0.00000000000001848 79.0
DYD3_k127_3655007_3 DHH family K06881 - 3.1.13.3,3.1.3.7 0.00000005289 55.0
DYD3_k127_3659166_0 - - GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008757,GO:0016278,GO:0016740,GO:0016741,GO:0032259 - 6.641e-300 988.0
DYD3_k127_3659166_1 Type II secretion system (T2SS), protein E, N-terminal domain K02454,K02504,K02652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000335 462.0
DYD3_k127_3659166_2 PFAM Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000001236 210.0
DYD3_k127_3659166_3 TIGRFAM competence protein ComEA helix-hairpin-helix repeat K02237 - - 0.0000000000000001402 88.0
DYD3_k127_3661882_0 ABC transporter transmembrane region K18890 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008642 624.0
DYD3_k127_3661882_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002921 398.0
DYD3_k127_3661882_2 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003545 307.0
DYD3_k127_3661882_3 lysyltransferase activity K07027 - - 0.0000000000000000002815 100.0
DYD3_k127_3661882_4 ABC transporter related - - - 0.0000000000000000003966 100.0
DYD3_k127_3663582_0 Bacterial protein of unknown function (DUF885) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 427.0
DYD3_k127_3663582_1 Predicted membrane protein (DUF2238) K08984 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004969 265.0
DYD3_k127_3663582_2 CDGSH-type zinc finger. Function unknown. - - - 0.000000000000000000000000000000000000000000000000000000003402 214.0
DYD3_k127_3663582_3 membrane - - - 0.00000000000000000000000000000000000000000000000000000003038 205.0
DYD3_k127_3663582_4 Protein of unknown function, DUF - - - 0.00000000000000000000000000000000000000006381 157.0
DYD3_k127_3663582_5 translation initiation factor activity K06996 - - 0.000000000000000000000000001891 114.0
DYD3_k127_3663582_6 - - - - 0.00000000000000000003606 92.0
DYD3_k127_3663582_7 - - - - 0.000003068 51.0
DYD3_k127_3663582_8 Peptidase family M23 - - - 0.0001707 49.0
DYD3_k127_3673421_0 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003309 364.0
DYD3_k127_3673421_1 Multicopper oxidase K04753 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003079 341.0
DYD3_k127_3673421_2 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002096 305.0
DYD3_k127_3673421_3 Cytochrome c K00376,K02305,K17760 - 1.1.9.1,1.7.2.4 0.00000000000000000000000000000000000000000000000000000008188 215.0
DYD3_k127_3673421_4 PFAM ABC-2 type transporter K01992 - - 0.0000000000000000000000000001088 119.0
DYD3_k127_3677140_0 Glutathione peroxidase K00432 - 1.11.1.9 0.00000000000000000000000000000000000000000000000000000000000000000001937 238.0
DYD3_k127_3677140_1 Putative glycolipid-binding K09957 - - 0.00000000000000000000000000000000000000000000005294 178.0
DYD3_k127_3677140_2 -acetyltransferase - - - 0.000000000000000000000000000000000000001837 151.0
DYD3_k127_3677140_4 - - - - 0.000000003874 63.0
DYD3_k127_3677140_5 - - - - 0.000000111 59.0
DYD3_k127_3698469_0 COG0424 Nucleotide-binding protein implicated in inhibition of septum formation K06287 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0030145,GO:0036218,GO:0036221,GO:0042802,GO:0043167,GO:0043169,GO:0046872,GO:0046914,GO:0047429 - 0.0000000000000000000000000000000000000000009014 163.0
DYD3_k127_3698469_1 transcriptional K02483,K07667 GO:0008150,GO:0040007 - 0.00000001229 66.0
DYD3_k127_3698469_2 Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives - - - 0.0004876 49.0
DYD3_k127_3764191_0 glutamine synthetase K01915 - 6.3.1.2 1.277e-267 843.0
DYD3_k127_3764191_1 prohibitin homologues - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003207 355.0
DYD3_k127_3764191_2 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.000000000000000000000000002949 114.0
DYD3_k127_3764191_4 Protein conserved in bacteria - - - 0.00000000000008966 73.0
DYD3_k127_3766424_0 C-terminal domain of 1-Cys peroxiredoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002129 289.0
DYD3_k127_3766424_1 ECF sigma factor - - - 0.0000000000000000000000000000000000000000000000000000006909 203.0
DYD3_k127_3766424_2 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000002205 80.0
DYD3_k127_3770025_0 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 307.0
DYD3_k127_3770025_1 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788,K10810 - 2.5.1.3,5.3.99.10 0.0000000000000000000002547 103.0
DYD3_k127_3770025_2 Bifunctional sulfur carrier protein thiazole synthase K03154 - - 0.0000000000002499 79.0
DYD3_k127_3790802_0 Acyclic terpene utilisation family protein AtuA - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004986 586.0
DYD3_k127_3790802_1 enoyl-CoA hydratase isomerase family K13766 - 4.2.1.18 0.00000000000000000000000000000000000000001297 161.0
DYD3_k127_3790802_2 - - - - 0.0000000000000000000000000000000000003022 160.0
DYD3_k127_3790802_3 Acyclic terpene utilisation family protein AtuA - - - 0.000001489 54.0
DYD3_k127_3790802_4 Belongs to the peptidase S8 family - - - 0.0003077 53.0
DYD3_k127_3794712_0 Protein of unknown function (DUF1194) K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 343.0
DYD3_k127_3794712_1 von Willebrand factor type A domain K07114 - - 0.000000000000000000000000000000000000000001086 179.0
DYD3_k127_3796753_0 4Fe-4S dicluster domain K00184 - - 2.407e-195 638.0
DYD3_k127_3796753_1 Polysulphide reductase, NrfD K00185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001282 540.0
DYD3_k127_3796753_2 Pfam Polysulphide reductase, NrfD - - - 0.00000000000000000000000000000000000000000003204 182.0
DYD3_k127_3796753_3 Cytochrome c - - - 0.0000000000000004219 87.0
DYD3_k127_3796753_4 Protein of unknown function (DUF3341) - - - 0.0000000000000883 87.0
DYD3_k127_3831590_0 DHH family K07462 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003218 460.0
DYD3_k127_3831590_1 Zn-ribbon protein possibly nucleic acid-binding K07164 - - 0.0000000000000001407 89.0
DYD3_k127_3832559_0 transmembrane transporter activity K18138 - - 0.0 1577.0
DYD3_k127_3832559_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001796 372.0
DYD3_k127_3832559_2 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.00000000000000000000000000004357 121.0
DYD3_k127_3832559_3 efflux transmembrane transporter activity K18300,K18308 - - 0.000000000000000000000000003704 130.0
DYD3_k127_3865294_0 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004135 254.0
DYD3_k127_3865294_1 Glyoxalase-like domain K06996 - - 0.000000000000000000000000000000000006638 140.0
DYD3_k127_3865294_2 COG NOG14600 non supervised orthologous group - - - 0.0000000000000000000000002987 106.0
DYD3_k127_3865294_3 Trm112p-like protein K09791 - - 0.000000000000004164 80.0
DYD3_k127_3865294_4 Belongs to the ClpA ClpB family K03696 - - 0.0001124 47.0
DYD3_k127_3885691_0 cAMP biosynthetic process - - - 0.000000000000000000000000000000000000000000000002161 196.0
DYD3_k127_3885691_1 protein kinase activity - - - 0.000001419 61.0
DYD3_k127_3885691_2 Protein kinase domain K12132 - 2.7.11.1 0.0004646 47.0
DYD3_k127_3889289_0 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002507 572.0
DYD3_k127_3889289_1 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002819 341.0
DYD3_k127_3889289_2 Belongs to the thiolase family K00626,K00632 - 2.3.1.16,2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004982 275.0
DYD3_k127_3889289_3 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000003235 274.0
DYD3_k127_3889289_4 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.00000000000000000000000000000000000000765 161.0
DYD3_k127_3890826_0 Prolyl oligopeptidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 342.0
DYD3_k127_3890826_1 PFAM Iron sulphur-containing domain, CDGSH-type - - - 0.0000000000000000000000801 101.0
DYD3_k127_3892634_0 Involved in the tonB-independent uptake of proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008895 280.0
DYD3_k127_3894998_0 Sulfatase K01138 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002844 434.0
DYD3_k127_3894998_1 Acetyltransferase (GNAT) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003671 322.0
DYD3_k127_3894998_10 acetyltransferase K22441 - 2.3.1.57 0.000000000000001012 79.0
DYD3_k127_3894998_2 VIT family - - - 0.00000000000000000000000000000000000000000000000000000000000000000001799 239.0
DYD3_k127_3894998_3 Appr-1'-p processing enzyme - - - 0.00000000000000000000000000000000000000000000000000000263 198.0
DYD3_k127_3894998_4 thiolester hydrolase activity - - - 0.000000000000000000000000000000000000000000000001822 198.0
DYD3_k127_3894998_5 Phosphatidylethanolamine-binding protein K06910 - - 0.0000000000000000000000000000000000000000000003045 190.0
DYD3_k127_3894998_6 Low affinity iron permease - - - 0.00000000000000000000000000000000000000000001324 184.0
DYD3_k127_3894998_7 SnoaL-like domain - - - 0.000000000000000000000000000000000000000008531 159.0
DYD3_k127_3894998_8 - - - - 0.000000000000000000000000000006161 138.0
DYD3_k127_3894998_9 Acetyltransferase (GNAT) domain - - - 0.00000000000000000008421 89.0
DYD3_k127_3898798_0 Aromatic amino acid lyase K01745 - 4.3.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002553 414.0
DYD3_k127_3898798_1 Tetratricopeptide repeat - - - 0.00000000000000000000000008338 121.0
DYD3_k127_3901199_0 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000163 224.0
DYD3_k127_3901199_1 NlpC/P60 family K13694,K21471 - 3.4.17.13 0.00000000000000000000000000005152 123.0
DYD3_k127_3901199_2 Cysteine-rich CPXCG - - - 0.00000000001201 67.0
DYD3_k127_3901199_3 Psort location Cytoplasmic, score K00019,K00059 - 1.1.1.100,1.1.1.30 0.0000000003382 61.0
DYD3_k127_3901199_4 short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.0000007138 53.0
DYD3_k127_39025_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 3.349e-199 635.0
DYD3_k127_39025_1 PFAM NAD-dependent epimerase dehydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001726 565.0
DYD3_k127_39025_2 proteins of the AP superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004953 367.0
DYD3_k127_39025_3 Phosphate acyltransferases - - - 0.0000000000000000000000000000000000000001071 159.0
DYD3_k127_39025_4 Rhomboid family - - - 0.000000000000000000000000000000467 135.0
DYD3_k127_39025_5 NHL repeat - - - 0.00000002714 66.0
DYD3_k127_3920639_0 Ftsk_gamma K03466 - - 4.553e-207 676.0
DYD3_k127_3920639_1 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004572 534.0
DYD3_k127_3920639_2 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005914 398.0
DYD3_k127_3920639_3 Uncharacterised protein family UPF0102 K07460 - - 0.00000000000000000000000000001374 122.0
DYD3_k127_3920639_4 2-phosphosulpholactate phosphatase K05979 - 3.1.3.71 0.00000000000000000000001106 107.0
DYD3_k127_3920639_5 Modulates RecA activity K03565 - - 0.00000000007549 70.0
DYD3_k127_3943287_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004277 530.0
DYD3_k127_3943287_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.0000000108 56.0
DYD3_k127_3948379_0 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002008 337.0
DYD3_k127_3948379_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000333 245.0
DYD3_k127_3948379_2 NDK K00940 - 2.7.4.6 0.00000000000000000000000000000000000000000000002629 174.0
DYD3_k127_3948379_3 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 - - - 0.0000000000000000000000000000000000002144 149.0
DYD3_k127_3948379_4 Uncharacterized ACR, COG1399 K07040 - - 0.00000000000000000000000001133 115.0
DYD3_k127_3948379_5 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.00000000000003941 74.0
DYD3_k127_395180_0 Belongs to the metallo-dependent hydrolases superfamily. HutI family K01468 - 3.5.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005967 518.0
DYD3_k127_395180_1 Belongs to the arginase family K01479,K12255 - 3.5.3.7,3.5.3.8 0.0000000000000000000000000000000000000000000000000000000000148 216.0
DYD3_k127_395180_2 - - - - 0.000009042 55.0
DYD3_k127_3955254_0 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01006 - 2.7.9.1 0.0 1046.0
DYD3_k127_3955254_1 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 4.411e-266 842.0
DYD3_k127_3955254_10 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000001647 94.0
DYD3_k127_3955254_2 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002485 537.0
DYD3_k127_3955254_3 Adenylosuccinate lyase C-terminus K01756 - 4.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006474 541.0
DYD3_k127_3955254_4 Trypsin K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001866 399.0
DYD3_k127_3955254_5 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000212 391.0
DYD3_k127_3955254_6 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 297.0
DYD3_k127_3955254_7 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000000000000000000001452 234.0
DYD3_k127_3955254_8 CDP-alcohol phosphatidyltransferase K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000002657 220.0
DYD3_k127_3955254_9 Transcription factor zinc-finger K09981 - - 0.0000000000000000001167 92.0
DYD3_k127_3965128_0 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000596 522.0
DYD3_k127_3965128_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 522.0
DYD3_k127_3965128_2 Phosphoglucomutase/phosphomannomutase, C-terminal domain K15778 - 5.4.2.2,5.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001342 509.0
DYD3_k127_3965128_3 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus K00341 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000657 470.0
DYD3_k127_3965128_4 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002077 460.0
DYD3_k127_3965128_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008079 346.0
DYD3_k127_3965128_6 Belongs to the carbamate kinase family K00926 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006525,GO:0006527,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008804,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009987,GO:0016054,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0019546,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 2.7.2.2 0.00000000000000000000000000000000000000000000000000000000000000000001 248.0
DYD3_k127_3965128_7 Uncharacterised protein family (UPF0182) K09118 - - 0.000000000000000000000000000000002264 149.0
DYD3_k127_3967820_0 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000228 525.0
DYD3_k127_3967820_1 UDP-N-acetylglucosamine 2-epimerase K01791 - 5.1.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002397 403.0
DYD3_k127_3967820_2 Polyphosphate kinase 2 (PPK2) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007303 262.0
DYD3_k127_3967820_3 Polysaccharide pyruvyl transferase - - - 0.00000000000000000000000000000000000001551 166.0
DYD3_k127_3967820_4 COG1596 Periplasmic protein involved in polysaccharide export K01991 - - 0.00000000000006114 85.0
DYD3_k127_3967820_5 Chain length determinant protein K16554 - - 0.0000000000000688 85.0
DYD3_k127_3967820_6 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000003237 57.0
DYD3_k127_3974996_0 Predicted permease YjgP/YjgQ family K07091 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001248 295.0
DYD3_k127_3974996_1 Predicted permease YjgP/YjgQ family K11720 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005538 273.0
DYD3_k127_3974996_2 CarboxypepD_reg-like domain - - - 0.000000000000000000000000000000000000000000000001013 188.0
DYD3_k127_398485_0 cytochrome c oxidase K02351,K02862 - - 0.00000000000000000000000000000000000000000000000000004353 197.0
DYD3_k127_3989583_0 Glycosyl transferase, family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003098 387.0
DYD3_k127_3989583_1 Psort location CytoplasmicMembrane, score - - - 0.000000000005424 78.0
DYD3_k127_3989583_2 lysyltransferase activity K07027,K20468 - - 0.0003288 48.0
DYD3_k127_3997275_0 aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009055 399.0
DYD3_k127_3997275_1 Branched-chain amino acid transport system / permease component K02057 - - 0.000000000000000000000003027 103.0
DYD3_k127_3997275_2 - - - - 0.00000000000000000000001041 108.0
DYD3_k127_3997275_3 - K06921 - - 0.000000000000002175 88.0
DYD3_k127_3997923_0 Mur ligase middle domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002746 400.0
DYD3_k127_3997923_1 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.000000000000000000000000000000000000000000000000000000000000001516 228.0
DYD3_k127_3997923_2 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000000000000000000000000007709 205.0
DYD3_k127_4000198_0 lysine biosynthetic process via aminoadipic acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 394.0
DYD3_k127_4000198_1 Phosphate acyltransferases - - - 0.000000000000000000003546 101.0
DYD3_k127_4017859_0 Belongs to the peptidase M24B family K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000006142 252.0
DYD3_k127_4017859_1 zinc D-Ala-D-Ala carboxypeptidase activity K08641 - 3.4.13.22 0.000000000000000000000000000000000000000000000000000000000000000004029 234.0
DYD3_k127_4017859_2 Transcription elongation factor, N-terminal K03624 - - 0.0000000000000000000000000000000000000000003722 168.0
DYD3_k127_4017859_3 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter - - - 0.00000000000000000000000000000000000007659 145.0
DYD3_k127_4017859_4 - - - - 0.0000000000000000000000000000001486 134.0
DYD3_k127_4017859_5 NHL repeat - - - 0.0001618 54.0
DYD3_k127_4018892_0 Lanthionine synthetase C-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 520.0
DYD3_k127_4018892_1 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001884 419.0
DYD3_k127_4018892_3 - - - - 0.0000000000000000000000000000000000000000004017 175.0
DYD3_k127_4018892_4 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000005218 146.0
DYD3_k127_407680_0 Glucose inhibited division protein A K21401 - 1.3.99.38 0.00000000000000000000000000000000000000000000000006938 188.0
DYD3_k127_407680_1 Integral membrane protein DUF92 - - - 0.0000000000000000000000000000000000001656 153.0
DYD3_k127_407680_2 - - - - 0.00000000000345 75.0
DYD3_k127_4079416_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 4.4e-323 1000.0
DYD3_k127_4079416_1 Transcriptional regulatory protein, C terminal K02483 - - 0.000000000000000004235 89.0
DYD3_k127_4079416_2 Transport of potassium into the cell K03549 - - 0.0000000000001812 70.0
DYD3_k127_4079416_3 STAS domain K04749 - - 0.00004611 49.0
DYD3_k127_4093762_0 Acyl-CoA oxidase K00232 - 1.3.3.6 1.456e-200 645.0
DYD3_k127_4093762_1 Ribose/Galactose Isomerase - - - 0.00000000000000000000000000000000000000000000000000002197 193.0
DYD3_k127_409660_0 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006893 351.0
DYD3_k127_409660_1 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.000000000000000000000000000000000000000000000000001571 198.0
DYD3_k127_4105510_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000003 268.0
DYD3_k127_4105510_1 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.00000000000000000000000000000000000000000000000000000000006052 228.0
DYD3_k127_4106965_0 Domain in cystathionine beta-synthase and other proteins. K01697 - 4.2.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 591.0
DYD3_k127_4106965_1 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005678 378.0
DYD3_k127_4106965_2 Belongs to the GarS family - - - 0.000000000000000000000000000000002353 144.0
DYD3_k127_4106965_3 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.000000002799 60.0
DYD3_k127_4124560_0 Cys/Met metabolism PLP-dependent enzyme K01758 - 4.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000484 520.0
DYD3_k127_4124560_1 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008299 318.0
DYD3_k127_4162909_0 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.000000000000000000000000000000000000000000000000000002188 203.0
DYD3_k127_4162909_1 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.0000000000000000000000000000000000000000000000000003493 187.0
DYD3_k127_4162909_2 Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC) - - - 0.000000000000000000004531 104.0
DYD3_k127_4187441_0 Helix-turn-helix diphteria tox regulatory element K03709 - - 0.00000000000000000000000000000000000000000000000000000000000000000000006867 248.0
DYD3_k127_4187441_1 Thioredoxin - - - 0.000000000000000000000341 110.0
DYD3_k127_4187441_2 carboxylic ester hydrolase activity - - - 0.0000002634 53.0
DYD3_k127_4190352_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 2.24e-234 744.0
DYD3_k127_4190352_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005223 413.0
DYD3_k127_4190352_10 Lanthionine synthetase C family protein - - - 0.000000000000000006325 85.0
DYD3_k127_4190352_11 - - - - 0.0000000019 67.0
DYD3_k127_4190352_12 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.00001362 51.0
DYD3_k127_4190352_2 ADP-ribosylation factor family K06883 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002961 379.0
DYD3_k127_4190352_3 Protein of unknown function (DUF1624) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002562 383.0
DYD3_k127_4190352_4 Competence-damaged protein K03742 - 3.5.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004264 381.0
DYD3_k127_4190352_5 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007032 256.0
DYD3_k127_4190352_6 metallopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000006395 239.0
DYD3_k127_4190352_7 Roadblock/LC7 domain - - - 0.00000000000000000000000000000000000000000000000004781 188.0
DYD3_k127_4190352_8 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.00000000000000000000000000000000000000000006529 169.0
DYD3_k127_4190352_9 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.000000000000000000000000000244 124.0
DYD3_k127_4201094_0 Putative esterase K07017 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001909 320.0
DYD3_k127_4201094_1 - - - - 0.000000000000004139 81.0
DYD3_k127_4201094_2 Protein of unknown function with HXXEE motif - - - 0.00000000006526 69.0
DYD3_k127_4203594_0 amino acid activation for nonribosomal peptide biosynthetic process K05996 - 3.4.17.18 0.0000000000000000000000000000001532 139.0
DYD3_k127_4203594_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.00000000013 63.0
DYD3_k127_4203594_2 Involved in the tonB-independent uptake of proteins K03641 - - 0.00000002305 66.0
DYD3_k127_4214722_0 aminopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000001912 255.0
DYD3_k127_4214722_1 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000000000000000000000000000000000000000002064 169.0
DYD3_k127_4230509_0 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 350.0
DYD3_k127_4230509_1 Lipocalin / cytosolic fatty-acid binding protein family K03098 - - 0.000000000000000000000000000000000000000000000000132 199.0
DYD3_k127_4237425_0 cellulase activity - - - 2.122e-225 723.0
DYD3_k127_4243221_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 2.252e-202 644.0
DYD3_k127_4243221_1 Drug exporters of the RND superfamily K06994,K07003,K20466,K20470 GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006869,GO:0008150,GO:0009273,GO:0009987,GO:0010876,GO:0015920,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0033036,GO:0040007,GO:0042546,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0071554,GO:0071702,GO:0071766,GO:0071840,GO:0071944,GO:1901264 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004357 412.0
DYD3_k127_4243221_2 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000007306 268.0
DYD3_k127_4243221_3 Matrixin - - - 0.00000000000000000000109 104.0
DYD3_k127_4258294_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 2.382e-244 786.0
DYD3_k127_4258294_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000001252 59.0
DYD3_k127_4264220_0 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 368.0
DYD3_k127_4264220_1 Glycosyl transferase family group 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001846 360.0
DYD3_k127_4264220_10 HEAT repeat - - - 0.00000000000000000831 100.0
DYD3_k127_4264220_2 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001744 321.0
DYD3_k127_4264220_3 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002759 297.0
DYD3_k127_4264220_4 HD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001677 283.0
DYD3_k127_4264220_5 Domain of unknown function (DUF4956) - - - 0.0000000000000000000000000000000000000000000000000000000000001294 225.0
DYD3_k127_4264220_6 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000006456 183.0
DYD3_k127_4264220_7 response regulator receiver K02658 - - 0.00000000000000000000000002164 115.0
DYD3_k127_4264220_8 - - - - 0.00000000000000000000001561 111.0
DYD3_k127_4264220_9 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.0000000000000000003611 102.0
DYD3_k127_4268109_0 Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003088 483.0
DYD3_k127_4268109_1 decarboxylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002121 409.0
DYD3_k127_4268109_2 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000371 269.0
DYD3_k127_4268109_3 PFAM glycosyl transferase family 9 K02841 - - 0.00000000005042 70.0
DYD3_k127_4276724_0 WD40-like Beta Propeller Repeat K03641 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 317.0
DYD3_k127_4276724_1 MotA/TolQ/ExbB proton channel family K03562 - - 0.000000000000000000000000000000000000000000000000000006046 205.0
DYD3_k127_4276724_2 Polysaccharide biosynthesis protein K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000006038 175.0
DYD3_k127_4276724_3 OmpA family K03640 - - 0.00000000000000000000000000000000000001154 152.0
DYD3_k127_4276724_4 TonB C terminal K03832 - - 0.0000000000000000000000000000000000000566 158.0
DYD3_k127_4276724_5 Biopolymer transport protein ExbD/TolR K03559,K03560 - - 0.0000000000000000000000000000000000357 145.0
DYD3_k127_4276724_6 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.0000000007029 71.0
DYD3_k127_4303238_0 EamA-like transporter family - - - 0.0000000000000000000000000000000000009482 143.0
DYD3_k127_4303238_1 Protein kinase domain - - - 0.000006772 52.0
DYD3_k127_4352691_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004007 523.0
DYD3_k127_4352691_1 Phosphoribosyl transferase domain K00760 - 2.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000008691 256.0
DYD3_k127_4352691_2 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.0000000000000000000000012 115.0
DYD3_k127_4352691_3 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.0000003744 57.0
DYD3_k127_4359667_0 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454,K02652 - - 0.00000000000000000000000000000000000000000000000000000000002008 221.0
DYD3_k127_4359667_1 Periplasmic copper-binding protein (NosD) - - - 0.000000000000000000000000000000000000000000000000000000002234 218.0
DYD3_k127_4359667_2 NUDIX domain K08310 - 3.6.1.67 0.0000000000000000000000000000000000000008988 160.0
DYD3_k127_4370959_0 Insulinase (Peptidase family M16) K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005487 496.0
DYD3_k127_4370959_1 Beta-Casp domain K07576 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000351 474.0
DYD3_k127_4370959_2 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate K00761 - 2.4.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001904 309.0
DYD3_k127_4370959_3 Insulinase (Peptidase family M16) - - - 0.00000000000000000000000000000000000000000008015 183.0
DYD3_k127_4370959_4 DUF218 domain - - - 0.000000000000000000000000000000168 139.0
DYD3_k127_4370959_5 Resolvase - - - 0.00001866 48.0
DYD3_k127_4381995_0 Aldehyde dehydrogenase family K22187 - - 1.946e-256 798.0
DYD3_k127_4381995_1 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005472 562.0
DYD3_k127_4381995_10 Intracellular proteinase inhibitor - - - 0.00005664 53.0
DYD3_k127_4381995_2 Peptidase inhibitor I9 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000288 386.0
DYD3_k127_4381995_3 VWA domain containing CoxE-like protein K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007655 346.0
DYD3_k127_4381995_4 PFAM Sodium calcium exchanger membrane region K07301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002299 318.0
DYD3_k127_4381995_5 tRNA processing K06864 - - 0.0000000000000000000000000000000000000000000000000003201 213.0
DYD3_k127_4381995_6 Sigma-70 region 2 K03088 - - 0.00000000000000000000000000000000006405 148.0
DYD3_k127_4381995_7 RF-1 domain K15034 - - 0.0000000000000000000000000001121 120.0
DYD3_k127_4381995_8 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.000000000000000000000001117 118.0
DYD3_k127_4381995_9 - - - - 0.00000000000000006232 95.0
DYD3_k127_4421449_0 RimK-like ATP-grasp domain K03802 - 6.3.2.29,6.3.2.30 0.0 1171.0
DYD3_k127_4421449_1 Peptidase family S51 K13282 - 3.4.15.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 350.0
DYD3_k127_4421449_2 Mur ligase family, glutamate ligase domain - - - 0.00000000000000000000000000000000008454 154.0
DYD3_k127_4421449_3 Belongs to the metallo-dependent hydrolases superfamily. NagA family K01305,K01443 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008242,GO:0008270,GO:0008798,GO:0016787,GO:0019538,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.5.1.25 0.00000000000000000000002291 102.0
DYD3_k127_4432695_0 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 501.0
DYD3_k127_4432695_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000325 322.0
DYD3_k127_4432695_2 Yqey-like protein K09117 - - 0.0000000000000000000000000000000003835 136.0
DYD3_k127_4432695_3 PFAM Histidine triad (HIT) protein K02503 - - 0.000000000000000000000000000000003035 134.0
DYD3_k127_4432695_4 rRNA (uridine-N3-)-methyltransferase activity K09761 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016436,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070042,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.193 0.0000000007082 61.0
DYD3_k127_4434442_0 Bacterial regulatory protein, Fis family K13599 - - 0.00000000000000000000000000000000000000000000000000000000000003215 236.0
DYD3_k127_4434442_1 Histidine kinase K13598 - 2.7.13.3 0.000000000000000000000001593 114.0
DYD3_k127_4444247_0 Glycosyl hydrolase family 20, catalytic domain K12373 - 3.2.1.52 1.747e-206 681.0
DYD3_k127_4444247_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005943 567.0
DYD3_k127_4444247_2 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004935 527.0
DYD3_k127_4446169_0 Branched-chain amino acid transport system / permease component K02057 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004848 303.0
DYD3_k127_4446169_1 ABC transporter K02056 - 3.6.3.17 0.00000000000000000000000000000000000000000000006715 177.0
DYD3_k127_4451010_0 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002566 335.0
DYD3_k127_4451010_1 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000238 316.0
DYD3_k127_4451010_2 Diguanylate cyclase - - - 0.0000000000000000000000000000000002043 148.0
DYD3_k127_4451010_3 Domain of unknown function (DUF1731) K07071 - - 0.0000000000000000008065 87.0
DYD3_k127_4451010_4 HD domain - - - 0.0001484 54.0
DYD3_k127_4473419_0 aminopeptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002995 451.0
DYD3_k127_4473419_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004774 427.0
DYD3_k127_4473419_2 membrane organization - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003788 317.0
DYD3_k127_4473419_3 Sigma-70 region 2 K03088 - - 0.00000000000000000000000000000000000001836 153.0
DYD3_k127_4473419_5 Putative adhesin - - - 0.0000000000000007847 88.0
DYD3_k127_4480012_0 DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000407 535.0
DYD3_k127_4480869_0 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.000000000000000000000000000000001284 136.0
DYD3_k127_4480869_1 GIY-YIG type nucleases (URI domain) K03703 - - 0.000000000000003122 78.0
DYD3_k127_4480869_2 Peptidase family M23 - - - 0.0000004634 57.0
DYD3_k127_4480869_5 Peptidase family M23 - - - 0.0001414 53.0
DYD3_k127_4490292_0 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000168 500.0
DYD3_k127_4490292_1 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000002526 249.0
DYD3_k127_4506609_0 Metal binding domain of Ada K00567,K10778 - 2.1.1.63 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004963 338.0
DYD3_k127_4506609_1 Amidohydrolase family K06015 - 3.5.1.81 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003808 321.0
DYD3_k127_4506609_2 Alpha beta hydrolase K00433 - 1.11.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000001411 256.0
DYD3_k127_4510728_0 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001629 353.0
DYD3_k127_4510728_1 Glycosyl transferase 4-like domain - - - 0.0000000000000000000000000000000000000000000000001158 191.0
DYD3_k127_4510728_2 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0000000000000000000000000000001836 141.0
DYD3_k127_4510728_3 Bacterial membrane protein YfhO - - - 0.00000000000000000000000006723 109.0
DYD3_k127_4510728_4 Sigma-54 factor, Activator interacting domain (AID) K03092 - - 0.0000000004657 60.0
DYD3_k127_4521038_0 Involved in the tonB-independent uptake of proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006956 572.0
DYD3_k127_4521038_1 glycerone kinase activity K07030 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003573 306.0
DYD3_k127_4521038_2 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.00000000000000000000000004026 125.0
DYD3_k127_4539738_0 PLD-like domain K06131 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007332 541.0
DYD3_k127_4539738_1 Formate/nitrite transporter K06212 - - 0.0000000000000000000000294 104.0
DYD3_k127_4571800_0 lysine biosynthetic process via aminoadipic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001696 457.0
DYD3_k127_4571800_1 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005228 436.0
DYD3_k127_4571800_10 PFAM Metal-dependent phosphohydrolase, HD K06951 - - 0.0000000000000000000000000003869 122.0
DYD3_k127_4571800_11 - - - - 0.000000000000007134 79.0
DYD3_k127_4571800_12 Protein of unknown function, DUF255 K06888 - - 0.00000003838 61.0
DYD3_k127_4571800_13 - - - - 0.00000599 56.0
DYD3_k127_4571800_2 membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002863 362.0
DYD3_k127_4571800_3 Outer membrane protein transport protein (OMPP1/FadL/TodX) K06076 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 359.0
DYD3_k127_4571800_4 Phospholipase D. Active site motifs. K06131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002347 331.0
DYD3_k127_4571800_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006924 302.0
DYD3_k127_4571800_6 GDSL-like Lipase/Acylhydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000006669 247.0
DYD3_k127_4571800_7 Outer membrane efflux protein K12340 - - 0.00000000000000000000000000000000000000000000000000000000000000000012 246.0
DYD3_k127_4571800_8 Peptidyl-prolyl cis-trans isomerase K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000001126 197.0
DYD3_k127_4571800_9 ECF sigma factor K03088 - - 0.00000000000000000000000000000567 131.0
DYD3_k127_4597807_0 protein kinase activity K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000002938 236.0
DYD3_k127_4608156_0 Bacterial transcriptional activator domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008294 565.0
DYD3_k127_4608156_1 Belongs to the FPG family K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 412.0
DYD3_k127_4608156_2 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 383.0
DYD3_k127_4608156_3 Serine/threonine phosphatases, family 2C, catalytic domain K01090,K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004617 285.0
DYD3_k127_4608156_4 Heat shock 70 kDa protein K04043 - - 0.0000000000114 70.0
DYD3_k127_4608156_5 Globin K05916 - 1.14.12.17 0.000000001446 66.0
DYD3_k127_4608156_7 Hep Hag repeat protein - - - 0.0001166 53.0
DYD3_k127_4617980_0 AcrB/AcrD/AcrF family K03296 - - 0.0 1448.0
DYD3_k127_4617980_1 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 608.0
DYD3_k127_4617980_2 Biotin-lipoyl like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006214 301.0
DYD3_k127_4617980_3 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008282 296.0
DYD3_k127_4617980_4 Phosphate acyltransferases K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000002278 172.0
DYD3_k127_4617980_5 OsmC-like protein - - - 0.00000000000000000000000000226 117.0
DYD3_k127_4617980_6 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000005696 104.0
DYD3_k127_4617980_7 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000001742 80.0
DYD3_k127_4617980_8 Septum formation initiator K05589 - - 0.00000000000002464 77.0
DYD3_k127_461893_0 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005328 521.0
DYD3_k127_461893_1 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000006897 239.0
DYD3_k127_461893_2 Belongs to the metal hydrolase YfiT family - - - 0.00000000000000000000000000000000000000000000000000000000000003381 226.0
DYD3_k127_461893_3 Cold shock K03704 - - 0.000000000000000000000000000000002686 131.0
DYD3_k127_461893_4 Preprotein translocase SecG subunit K03075 - - 0.000000000000000002171 89.0
DYD3_k127_461893_5 Ribosomal protein S21 K02970 - - 0.0000000000000001301 80.0
DYD3_k127_4634685_0 Ketopantoate reductase PanE/ApbA C terminal K00077 - 1.1.1.169 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002132 306.0
DYD3_k127_4634685_1 Helix-hairpin-helix domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004261 262.0
DYD3_k127_4634685_2 phosphoribosyltransferase K07100 - - 0.00000000000000000000000000000000000000000000000000000000000000003694 230.0
DYD3_k127_4634685_3 phosphoribosyltransferase K07100 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000001894 209.0
DYD3_k127_4653205_0 TIGRFAM DNA polymerase III, alpha subunit K02337,K14162 - 2.7.7.7 1.961e-304 971.0
DYD3_k127_4653205_1 tRNA synthetases class I (M) K01874 - 6.1.1.10 1.522e-200 643.0
DYD3_k127_4653205_10 COG0457 FOG TPR repeat - - - 0.000002807 59.0
DYD3_k127_4653205_2 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 423.0
DYD3_k127_4653205_3 PFAM peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001868 430.0
DYD3_k127_4653205_4 PSP1 C-terminal conserved region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 328.0
DYD3_k127_4653205_5 Putative adhesin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001424 260.0
DYD3_k127_4653205_6 Putative aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000003359 257.0
DYD3_k127_4653205_7 domain, Protein K01179,K07260,K13735 - 3.2.1.4,3.4.17.14 0.0000000000000000000000000000000000000000000000000000000000003041 234.0
DYD3_k127_4653205_8 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000000001544 205.0
DYD3_k127_4653205_9 heme binding K21471 - - 0.000000000000000000000000000000000000000000001924 177.0
DYD3_k127_4666861_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 8.767e-301 934.0
DYD3_k127_4675086_0 RibD C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003116 393.0
DYD3_k127_4675086_1 Peptidase S9 prolyl oligopeptidase active site domain protein - - - 0.00000001078 63.0
DYD3_k127_4689449_0 Histidyl-tRNA synthetase K01892 - 6.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002388 435.0
DYD3_k127_4689449_2 TIGRFAM TonB-dependent heme hemoglobin receptor family protein K02014,K16087 - - 0.0000000000000000000000000000000000000000000000000005115 211.0
DYD3_k127_4689449_3 Mur ligase middle domain K11754 - 6.3.2.12,6.3.2.17 0.000000003651 59.0
DYD3_k127_4696598_0 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0015980,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0045333,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.141 0.000000000000000000000000000000000000000000000000000000000000002313 229.0
DYD3_k127_4696598_1 ribosomal protein S1 K02945 - - 0.0000000000000000000000000000000000002932 149.0
DYD3_k127_4711524_0 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001242 259.0
DYD3_k127_4711524_1 E1-E2 ATPase K01533 - 3.6.3.4 0.0000000000000000000000000000000000002842 141.0
DYD3_k127_4711524_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.000000000000000000002305 103.0
DYD3_k127_4722232_0 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.00000000000000000000000000000000000000000000000001297 194.0
DYD3_k127_4722232_1 Two component regulator propeller - - - 0.00000000000000000000000003263 122.0
DYD3_k127_4729684_0 Methylmalonyl-CoA mutase K01848,K11942 - 5.4.99.13,5.4.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 325.0
DYD3_k127_4729684_1 B12 binding domain K01849 - 5.4.99.2 0.0000000000000000000000000000000000000000000000000000000000000000007043 232.0
DYD3_k127_4729684_2 translation release factor activity K03265 GO:0001666,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006950,GO:0008150,GO:0009628,GO:0016020,GO:0030312,GO:0036293,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0070482,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000148 207.0
DYD3_k127_4729684_3 - - - - 0.000000000000000004231 91.0
DYD3_k127_4740555_0 Oxidoreductase molybdopterin binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004402 249.0
DYD3_k127_476255_0 Amidohydrolase family K06015 - 3.5.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002825 571.0
DYD3_k127_4775745_0 MgsA AAA+ ATPase C terminal K07478 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003088 542.0
DYD3_k127_4775745_1 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003284 456.0
DYD3_k127_4775745_2 Probable RNA and SrmB- binding site of polymerase A K00974 - 2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 324.0
DYD3_k127_4775745_3 KR domain K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000003697 242.0
DYD3_k127_4775745_4 transporter K07238,K11021,K16267 - - 0.0000000000000000000000000000000000000000000000000000005057 204.0
DYD3_k127_4775745_5 SIS domain K03271 - 5.3.1.28 0.00000000000000000000000000000000000000000000000000000166 210.0
DYD3_k127_4775745_6 protein tyrosine phosphatase activity K01104 - 3.1.3.48 0.000000000000000000000000000000000000000000000000001933 194.0
DYD3_k127_4775745_7 Late embryogenesis abundant protein - - - 0.00000000004782 76.0
DYD3_k127_4786541_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 451.0
DYD3_k127_4786541_1 Protein of unknown function DUF58 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007141 263.0
DYD3_k127_4786541_2 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.00000000000000000000000000000000000000000000000000000000000000001937 236.0
DYD3_k127_4786541_3 S4 RNA-binding domain K06178 - 5.4.99.22 0.000000000000000000000000000000000000000000000000000000000006391 223.0
DYD3_k127_4786541_4 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.00000000000000000000000000000000002549 145.0
DYD3_k127_4786541_5 Zinc finger domain - - - 0.000000000009522 69.0
DYD3_k127_4786541_6 rRNA binding K02968 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0004857,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008073,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030234,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0042979,GO:0043043,GO:0043086,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050790,GO:0065003,GO:0065007,GO:0065009,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:0098772,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000007021 64.0
DYD3_k127_4789494_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004261 279.0
DYD3_k127_4789494_1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.000000000000000000000000000000000000000000000000001824 188.0
DYD3_k127_4789494_2 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.000004537 50.0
DYD3_k127_4791865_0 Domain of unknown function (DUF5117) - - - 4.276e-285 902.0
DYD3_k127_4791865_1 ATP-dependent helicase K03579 - 3.6.4.13 1.714e-273 865.0
DYD3_k127_4791865_2 Chalcone isomerase-like - - - 0.000000000000000000000000000000000000000000000000001406 190.0
DYD3_k127_4792151_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 1.626e-208 675.0
DYD3_k127_4792151_1 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 - 2.1.1.74 0.000000000000000000000000000000000000000000000000000000000000000000000000002332 274.0
DYD3_k127_4792151_2 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.00000000000000002137 87.0
DYD3_k127_4801556_0 AcrB/AcrD/AcrF family K03296 - - 7.736e-318 996.0
DYD3_k127_4801556_1 AcrB/AcrD/AcrF family K03296 - - 0.00000000000003634 85.0
DYD3_k127_4870792_0 cAMP biosynthetic process K08282,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001751 503.0
DYD3_k127_4873035_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit K02118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005611 445.0
DYD3_k127_4873035_1 Protein of unknown function, DUF481 - - - 0.000000000000000000000001055 113.0
DYD3_k127_4873035_2 Produces ATP from ADP in the presence of a proton gradient across the membrane K02120 - - 0.00000000000000000000245 109.0
DYD3_k127_4873035_3 Copper binding proteins, plastocyanin/azurin family - - - 0.0000258 55.0
DYD3_k127_4873035_4 The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis K00758 - 2.4.2.4 0.00009277 45.0
DYD3_k127_4883211_0 Flavin containing amine oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006395 440.0
DYD3_k127_4883211_1 cyclopropane-fatty-acyl-phospholipid synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008383 285.0
DYD3_k127_4883211_2 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000002461 233.0
DYD3_k127_4883211_3 Macrocin-O-methyltransferase (TylF) - - - 0.00000000000000000000000000000000000000000000000000000000000000007059 232.0
DYD3_k127_4883211_4 Glycosyl transferase family 2 K00786 - - 0.000000000000000000000000000000000000000000000000001939 207.0
DYD3_k127_4883211_5 polysaccharide biosynthetic process - - - 0.000000000000000000000000000001482 139.0
DYD3_k127_4883211_6 lysine biosynthetic process via aminoadipic acid - - - 0.000000000000000000000002265 121.0
DYD3_k127_4883211_7 Membrane - - - 0.000000000000000006489 98.0
DYD3_k127_4892780_0 COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and K03182 - 4.1.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002324 537.0
DYD3_k127_4892780_1 UbiA prenyltransferase family K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003688 285.0
DYD3_k127_4892780_2 ECF sigma factor K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001744 264.0
DYD3_k127_4892780_3 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000000000000135 239.0
DYD3_k127_4892780_4 membrane K11622 - - 0.0000000000000000000000000000002936 140.0
DYD3_k127_4892780_5 Polymer-forming cytoskeletal - - - 0.000000000000000000000004022 117.0
DYD3_k127_4892780_6 protein kinase activity K12132 - 2.7.11.1 0.000001623 52.0
DYD3_k127_4892780_7 - - - - 0.00002442 53.0
DYD3_k127_4916641_0 PFAM CoA-binding domain protein K01905,K22224 - 6.2.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000667 541.0
DYD3_k127_4916641_1 AMP binding - - - 0.000003268 56.0
DYD3_k127_4927161_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001178 545.0
DYD3_k127_4927161_1 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003798 279.0
DYD3_k127_4927161_2 Belongs to the SEDS family K02563,K03588 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0008360,GO:0009987,GO:0015647,GO:0015648,GO:0015835,GO:0015836,GO:0016020,GO:0016021,GO:0022603,GO:0022604,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0032153,GO:0040007,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0051179,GO:0051234,GO:0051301,GO:0055085,GO:0065007,GO:0065008,GO:0071702,GO:0071705,GO:0071944,GO:1901264,GO:1901505 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000003585 206.0
DYD3_k127_4928212_0 Alpha-L-fucosidase K01206 - 3.2.1.51 6.104e-201 633.0
DYD3_k127_4928212_1 heat shock protein binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001611 374.0
DYD3_k127_4928212_2 heat shock protein binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 358.0
DYD3_k127_4928212_3 Putative esterase K07017 - - 0.0000000000000000000000000000000000000000000000000000000001188 231.0
DYD3_k127_4928212_4 - - - - 0.00000000000000003711 97.0
DYD3_k127_4928212_5 membrane transporter protein K07090 - - 0.000000005066 61.0
DYD3_k127_4932865_0 Bacterial transcriptional activator domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009811 631.0
DYD3_k127_4932865_1 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001593 589.0
DYD3_k127_4932865_2 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008281 314.0
DYD3_k127_4932865_3 Globin - - - 0.0000001667 63.0
DYD3_k127_4932865_4 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00003648 51.0
DYD3_k127_4952094_0 CYTH - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000583 278.0
DYD3_k127_4952094_1 negative regulation of transcription, DNA-templated - - - 0.00000000000000000000000000001263 122.0
DYD3_k127_4966970_0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003396 413.0
DYD3_k127_4966970_1 Thiolase, C-terminal domain K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000009094 248.0
DYD3_k127_4966970_2 Biotin biosynthesis protein BioY of Proteobacteria UniRef RepID B8F6V1_HAEPS K03523 - - 0.00000000000000000000000002626 118.0
DYD3_k127_4966970_3 CAAX protease self-immunity K07052 - - 0.00000000000000000000000006072 123.0
DYD3_k127_4966970_4 Belongs to the Glu Leu Phe Val dehydrogenases family K00263 - 1.4.1.9 0.000001044 60.0
DYD3_k127_4994367_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001638 342.0
DYD3_k127_5008021_0 oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor K00311 GO:0003674,GO:0003824,GO:0004174,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016645,GO:0016649,GO:0016722,GO:0017133,GO:0019866,GO:0022900,GO:0022904,GO:0031090,GO:0031224,GO:0031300,GO:0031301,GO:0031304,GO:0031305,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0032592,GO:0032991,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043783,GO:0044237,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045251,GO:0045333,GO:0048037,GO:0048038,GO:0048039,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0070013,GO:0098573,GO:0098798,GO:1902494,GO:1990204 1.5.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 555.0
DYD3_k127_5008021_1 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000003644 193.0
DYD3_k127_5008021_2 - - - - 0.000000007817 60.0
DYD3_k127_501069_0 protein, Hemolysin III K11068 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001463 279.0
DYD3_k127_501069_1 transcriptional regulator, ArsR family - - - 0.0000000000000000000000000000000000000000000000122 173.0
DYD3_k127_501069_2 - - - - 0.0000000000000000000006917 102.0
DYD3_k127_501069_4 alpha/beta hydrolase fold - - - 0.0000005219 53.0
DYD3_k127_5018617_0 protein kinase activity K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000001357 273.0
DYD3_k127_5018617_1 ECF sigma factor - - - 0.000000000000000000000000000000000000000000000000001523 190.0
DYD3_k127_5018617_2 - - - - 0.000000000000001303 86.0
DYD3_k127_5025303_0 amine dehydrogenase activity K17285 - - 2.452e-238 744.0
DYD3_k127_5025303_1 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002854 469.0
DYD3_k127_5025303_10 Transcriptional regulator - - - 0.00001602 51.0
DYD3_k127_5025303_2 Transglycosylase SLT domain K08307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002452 276.0
DYD3_k127_5025303_3 DNA polymerase III, delta subunit K02341 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000001451 235.0
DYD3_k127_5025303_4 NADPH-dependent FMN reductase K19784 - - 0.000000000000000000000000000000000000000000000000000000000000000849 224.0
DYD3_k127_5025303_5 - - - - 0.00000000000000000000000000000000000000000000000000000006169 204.0
DYD3_k127_5025303_6 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.000000000000000000000000000000000000000000000000000119 191.0
DYD3_k127_5025303_7 ECF sigma factor - - - 0.0000000000000000000000000000000000000000000000000007059 197.0
DYD3_k127_5025303_8 Transglycosylase SLT domain - - - 0.0000000000000000000000000000001386 133.0
DYD3_k127_5025303_9 - - - - 0.00000000006756 70.0
DYD3_k127_5065641_0 Peptidase family M49 - - - 1.097e-195 625.0
DYD3_k127_5065641_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006575 340.0
DYD3_k127_5065641_2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009114 314.0
DYD3_k127_5065641_3 ABC-type nitrate sulfonate bicarbonate transport K02051 - - 0.000000000000000000000000000000000000000006975 176.0
DYD3_k127_5065641_4 response regulator - - - 0.0000000000000000000000000000002417 134.0
DYD3_k127_5065641_5 PAS domain - - - 0.0000000000000000000000000000005096 138.0
DYD3_k127_5065641_6 heme binding - - - 0.00000000000000000000000000001093 126.0
DYD3_k127_5065641_7 - - - - 0.00000000000000251 80.0
DYD3_k127_5065641_8 - - - - 0.000000101 59.0
DYD3_k127_5075433_0 Peptidase family S41 K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000006692 241.0
DYD3_k127_5075433_1 Protein of unknown function (DUF1460) - - - 0.0000000000000000000009649 105.0
DYD3_k127_5089304_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008896 439.0
DYD3_k127_5089304_1 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002069 450.0
DYD3_k127_5089304_10 Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.000000000000000000000000000000000000000000000000000000000000000000007533 239.0
DYD3_k127_5089304_11 PFAM Peptidase S13, D-Ala-D-Ala carboxypeptidase C K07259 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000009926 253.0
DYD3_k127_5089304_12 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000000000000000000000004184 240.0
DYD3_k127_5089304_13 Histidine kinase K02482 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000001271 234.0
DYD3_k127_5089304_14 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.8.1.10 0.00000000000000000000000000000000000000000000000000001432 192.0
DYD3_k127_5089304_15 Haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000001045 197.0
DYD3_k127_5089304_16 Glutathione peroxidase - - - 0.0000000000000000000000000000000000000000001789 168.0
DYD3_k127_5089304_17 Glycine cleavage T-protein C-terminal barrel domain K06980 - - 0.000000000000000000000000001329 126.0
DYD3_k127_5089304_18 Diacylglycerol kinase K19302 - 3.6.1.27 0.000000000000000000000000001633 132.0
DYD3_k127_5089304_19 Serine threonine protein kinase K08884,K12132 GO:0000270,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005623,GO:0006022,GO:0006023,GO:0006024,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008047,GO:0008150,GO:0008152,GO:0008360,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009605,GO:0009607,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0010698,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019216,GO:0019217,GO:0019222,GO:0019538,GO:0022603,GO:0022604,GO:0030145,GO:0030203,GO:0030234,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032091,GO:0034645,GO:0036211,GO:0040007,GO:0042304,GO:0042546,GO:0042802,GO:0043085,GO:0043086,GO:0043167,GO:0043169,GO:0043170,GO:0043207,GO:0043388,GO:0043393,GO:0043412,GO:0044036,GO:0044038,GO:0044085,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044403,GO:0044419,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046777,GO:0046872,GO:0046890,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051055,GO:0051098,GO:0051099,GO:0051100,GO:0051101,GO:0051128,GO:0051701,GO:0051704,GO:0051707,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0062012,GO:0062014,GO:0065007,GO:0065008,GO:0065009,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:0075136,GO:0080090,GO:0098772,GO:0140096,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.7.11.1 0.0000000000000004544 88.0
DYD3_k127_5089304_2 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003558 407.0
DYD3_k127_5089304_20 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.0000000000001283 83.0
DYD3_k127_5089304_21 FAD binding domain K11472 - - 0.00000000002956 76.0
DYD3_k127_5089304_22 Glycosyltransferase family 87 K13671 - - 0.0000000001154 74.0
DYD3_k127_5089304_3 Surface antigen K07277 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 401.0
DYD3_k127_5089304_4 two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 356.0
DYD3_k127_5089304_5 Ferredoxin--NADP reductase K21567 - 1.18.1.2,1.19.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002702 357.0
DYD3_k127_5089304_6 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006498 325.0
DYD3_k127_5089304_7 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 305.0
DYD3_k127_5089304_8 Iron Permease K07243 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001209 284.0
DYD3_k127_5089304_9 Ribulose-phosphate 3 epimerase family K01783 - 5.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000007719 251.0
DYD3_k127_5096528_0 Aminotransferase class I and II K10206 - 2.6.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004646 411.0
DYD3_k127_5096528_1 HELICc2 K03722 - 3.6.4.12 0.000000000000000000000000000000000000000000000003629 175.0
DYD3_k127_5106491_0 Prokaryotic cytochrome b561 - - - 0.00000000000000000000000000000000000000000000000000000000000000000001796 250.0
DYD3_k127_5106491_1 protein kinase activity K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000002929 241.0
DYD3_k127_5106491_2 Bacterial transcriptional activator domain K12132 - 2.7.11.1 0.000001621 61.0
DYD3_k127_5128688_0 Domain of unknown function (DUF4388) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008747 439.0
DYD3_k127_5128688_1 Bacterial dnaA protein K02313 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005635 425.0
DYD3_k127_5128688_10 Roadblock LC7 family protein K07131 - - 0.00003424 53.0
DYD3_k127_5128688_11 Two component signalling adaptor domain K03408 - - 0.0005272 52.0
DYD3_k127_5128688_12 Roadblock/LC7 domain - - - 0.0009663 51.0
DYD3_k127_5128688_2 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008084 295.0
DYD3_k127_5128688_3 Small GTP-binding protein K06883 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001394 275.0
DYD3_k127_5128688_4 protein-glutamate O-methyltransferase activity K00575 - 2.1.1.80 0.00000000000000000000000000000000000000000000000000000000000002435 243.0
DYD3_k127_5128688_5 Domain of unknown function (DUF4388) - - - 0.0000000000000000000000000000000000005708 158.0
DYD3_k127_5128688_6 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.0000000000000000000000000007304 131.0
DYD3_k127_5128688_7 Chemotaxis signal transduction protein K03408 - - 0.0000000000000000000001272 113.0
DYD3_k127_5128688_8 Tetratricopeptide repeat - - - 0.0000000000000002597 89.0
DYD3_k127_5128688_9 Tetratricopeptide repeat - - - 0.0000001977 63.0
DYD3_k127_5134341_0 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 434.0
DYD3_k127_5134341_1 Uncharacterized protein conserved in bacteria (DUF2062) - - - 0.0000000000000000000000000007509 119.0
DYD3_k127_5134341_2 Protein involved in outer membrane biogenesis - - - 0.0000000000000000000001436 115.0
DYD3_k127_5137009_0 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity K00303 - 1.5.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004847 354.0
DYD3_k127_5137009_1 Zinc carboxypeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000003437 235.0
DYD3_k127_5139341_0 Cation transport protein K03498 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001948 460.0
DYD3_k127_5139341_1 TrkA-C domain K03455 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001968 440.0
DYD3_k127_5139341_2 TrkA-N domain K03499 - - 0.00000000000000000000000000000000000000000000000000000000001044 231.0
DYD3_k127_5145786_0 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003659 509.0
DYD3_k127_5145786_1 DNA-binding transcription factor activity K03892 - - 0.000000000000000000000000000000000000000000000000000000000000000000309 234.0
DYD3_k127_5145786_2 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.00000000000000000000000000000000000000000000000000000000009183 211.0
DYD3_k127_5161082_0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00261 - 1.4.1.3 1.835e-201 648.0
DYD3_k127_5161082_1 Bacillithiol biosynthesis BshC K22136 - - 0.00000000000000000000000000000000000000000000000000000000002883 229.0
DYD3_k127_5161082_2 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.000000000000000000000000000000000000000000000000002268 195.0
DYD3_k127_5161082_3 SAM-dependent methyltransferase - - - 0.00000000000000000000000000000000000000000000000001249 189.0
DYD3_k127_5161082_4 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.00000000000000000000000000000000002321 145.0
DYD3_k127_5161082_5 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.00000000000000000000000000000002057 134.0
DYD3_k127_5161082_6 Domain of unknown function (DUF374) K09778 - - 0.00001324 51.0
DYD3_k127_5166487_0 Alpha beta hydrolase K00433 - 1.11.1.10 0.00000000000000000000000000000000000000003601 165.0
DYD3_k127_5166487_1 - - - - 0.00000000000000000000000000000001316 138.0
DYD3_k127_5166487_2 Domain of unknown function (DUF378) - - - 0.00000000000000004616 83.0
DYD3_k127_5193350_0 OmpA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007961 261.0
DYD3_k127_5193350_1 - - - - 0.0000000000000000000000000000001286 128.0
DYD3_k127_5193350_2 Domain of unknown function (DU1801) - - - 0.00000000000000000000000000001067 119.0
DYD3_k127_5193350_3 Curli production assembly/transport component CsgG - - - 0.000000000000000000002712 108.0
DYD3_k127_5193350_4 cell wall binding repeat 2 - - - 0.000004425 58.0
DYD3_k127_5193350_6 Carbohydrate binding domain - - - 0.0001301 54.0
DYD3_k127_5193350_7 - - - - 0.0001548 46.0
DYD3_k127_5193350_8 Transglycosylase K05366 - 2.4.1.129,3.4.16.4 0.0008873 51.0
DYD3_k127_5200440_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007422 372.0
DYD3_k127_5200440_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.0000000000000000000000000000000000000000000000000000000002694 227.0
DYD3_k127_5210033_0 ABC1 family K03688 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001519 486.0
DYD3_k127_5210033_1 Phosphate acyltransferases - - - 0.000000000000000000000000000000000008049 156.0
DYD3_k127_522047_0 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002438 559.0
DYD3_k127_522047_1 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007961 491.0
DYD3_k127_522047_10 Domain of unknown function (DUF4142) K08995 - - 0.0000000000000000000005522 104.0
DYD3_k127_522047_11 - - - - 0.000000006422 61.0
DYD3_k127_522047_2 PFAM Rhodanese domain protein K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822 412.0
DYD3_k127_522047_3 Protein of unknown function (DUF819) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007304 413.0
DYD3_k127_522047_4 COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit K00499,K16319 - 1.14.12.1,1.14.15.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000626 383.0
DYD3_k127_522047_5 amino acid K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002072 348.0
DYD3_k127_522047_6 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009937 319.0
DYD3_k127_522047_7 ApaG domain K06195 - - 0.00000000000000000000000000000000000000000000000001062 186.0
DYD3_k127_522047_8 YceI-like domain - - - 0.000000000000000000000000000000000001477 147.0
DYD3_k127_522047_9 Belongs to the acetyltransferase family. ArgA subfamily - - - 0.000000000000000000000001496 113.0
DYD3_k127_5236000_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001887 423.0
DYD3_k127_5247088_0 Serine/Threonine protein kinases, catalytic domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002768 304.0
DYD3_k127_5247088_1 Phosphoribosyl transferase domain K07100 - - 0.0000000000000000000000000000000000000000003844 166.0
DYD3_k127_5257786_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003788 613.0
DYD3_k127_5257786_1 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 - 2.7.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 563.0
DYD3_k127_5257786_2 Enoyl-CoA hydratase/isomerase K01715 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001839 276.0
DYD3_k127_5257786_3 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000004822 249.0
DYD3_k127_5257786_4 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 - - 0.000000000000000000000000000000000000000000000000000000000000000001221 248.0
DYD3_k127_5257786_5 Cytochrome c7 and related cytochrome c - - - 0.00000000000000000009127 103.0
DYD3_k127_5257786_6 heat shock protein binding - - - 0.0000000000000000009338 100.0
DYD3_k127_5257786_7 Protein of unknown function (DUF721) - - - 0.0000000000004547 74.0
DYD3_k127_5257786_8 - - - - 0.00006657 55.0
DYD3_k127_5263264_0 Non-ribosomal peptide synthetase modules and related proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007773 528.0
DYD3_k127_5272514_0 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008603 285.0
DYD3_k127_5272514_1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K05606 - 5.1.99.1 0.00000000000000000000000000000000000000002501 161.0
DYD3_k127_5272514_2 Thioredoxin-like domain K03671 - - 0.00000000000000000000000000000000001015 137.0
DYD3_k127_5272514_3 - - - - 0.000003842 59.0
DYD3_k127_5275240_0 FtsX-like permease family K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002006 565.0
DYD3_k127_5275240_1 Amino acid permease K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004837 364.0
DYD3_k127_5275240_2 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001495 297.0
DYD3_k127_5275240_3 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.00000000000000000000000000000000000000000000000000000000007751 217.0
DYD3_k127_5275240_4 GDSL-like Lipase/Acylhydrolase K10804 - 3.1.1.5 0.0000000000000000000000000000000000000000000000000000000005969 209.0
DYD3_k127_5275240_5 permease - - - 0.000000000000000000000000000000009232 147.0
DYD3_k127_5275240_6 OsmC-like protein K04063 - - 0.00000000000000000000000000000004857 136.0
DYD3_k127_5275240_7 Enoyl-(Acyl carrier protein) reductase K00208 - 1.3.1.10,1.3.1.9 0.000000000000000000000001135 105.0
DYD3_k127_5275240_8 NHL repeat - - - 0.0000000008705 71.0
DYD3_k127_5278938_0 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 1.122e-255 796.0
DYD3_k127_5278938_1 LppC putative lipoprotein K07121 - - 0.000000002233 64.0
DYD3_k127_5313296_0 Domain of unknown function (DUF1731) K07071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008801 415.0
DYD3_k127_5313296_1 PFAM nuclease (SNase K01174 - 3.1.31.1 0.0000000000000000000153 102.0
DYD3_k127_5313546_0 Mandelate Racemase Muconate Lactonizing - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008303 369.0
DYD3_k127_5313546_1 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000171 262.0
DYD3_k127_5313546_2 Phospholipase/Carboxylesterase K06999 - - 0.00000000008397 64.0
DYD3_k127_532_0 ZIP Zinc transporter K16267 - - 0.0000000000000000000000000000000000000000000000000000000000000000006212 237.0
DYD3_k127_532_1 Isochorismatase family - - - 0.0000000000000000000000000000000000000000000000000000000000008834 217.0
DYD3_k127_532_2 COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog - - - 0.00000000000000000000000000000000000000000000000005226 184.0
DYD3_k127_5338710_0 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000298 607.0
DYD3_k127_5338710_1 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007934 316.0
DYD3_k127_5360922_0 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001382 293.0
DYD3_k127_5362146_0 PFAM Transglycosylase SLT domain K08309 - - 0.0000000000000000000000000000000000000219 161.0
DYD3_k127_5362146_1 general secretion pathway protein K02456,K02650 - - 0.000000000000002509 88.0
DYD3_k127_5362146_2 Secretin and TonB N terminus short domain K02453 - - 0.000000000000004957 87.0
DYD3_k127_5362146_3 PFAM Ig domain protein, group 1 domain protein K20276 - - 0.000000315 63.0
DYD3_k127_5377949_0 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000081 470.0
DYD3_k127_5377949_1 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006921 331.0
DYD3_k127_5377949_2 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001424 293.0
DYD3_k127_5377949_3 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000002464 175.0
DYD3_k127_5377949_4 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000001421 152.0
DYD3_k127_5377949_5 COG1862 Preprotein translocase subunit YajC K03210 - - 0.0000000000001618 83.0
DYD3_k127_5378517_0 Transglycosylase K21464 - 2.4.1.129,3.4.16.4 1.295e-207 666.0
DYD3_k127_5378517_1 Aminotransferase class-V - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001627 498.0
DYD3_k127_5378517_10 Chorismate mutase K00661,K04092,K04093,K04516,K14170 GO:0003674,GO:0003824,GO:0004106,GO:0004664,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006558,GO:0006570,GO:0006571,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009094,GO:0009095,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016866,GO:0017144,GO:0019438,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902221,GO:1902223 2.3.1.79,4.2.1.51,5.4.99.5 0.0000000003125 72.0
DYD3_k127_5378517_2 NeuB family K03856 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003532 432.0
DYD3_k127_5378517_3 Belongs to the peptidase S8 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 337.0
DYD3_k127_5378517_4 Predicted Zn-dependent protease (DUF2268) - - - 0.0000000000000000000000000000000000000000000000000000000000000000004404 246.0
DYD3_k127_5378517_5 DinB family - - - 0.0000000000000000000000000000000000000009723 163.0
DYD3_k127_5378517_6 Prephenate dehydratase K04518,K14170 - 4.2.1.51,5.4.99.5 0.0000000000000000000000000000000003495 143.0
DYD3_k127_5378517_7 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000000005855 124.0
DYD3_k127_5378517_8 Putative stress-induced transcription regulator - - - 0.00000000000000000000000001095 118.0
DYD3_k127_5378517_9 META domain K03668 - - 0.0000000001138 72.0
DYD3_k127_5381845_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 1.411e-307 978.0
DYD3_k127_5381845_1 secondary active sulfate transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000004329 246.0
DYD3_k127_5381845_2 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000000000000000000000000000000000000000000000000006832 210.0
DYD3_k127_5381845_3 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.000000000000000000000000008776 117.0
DYD3_k127_5417587_0 PFAM Integrase catalytic K07497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004012 398.0
DYD3_k127_5417587_1 PFAM transposase IS3 IS911 family protein K07483 - - 0.000000000000000000000000000000002257 132.0
DYD3_k127_5445200_0 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11784 - 1.21.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008708 514.0
DYD3_k127_5445200_1 Elongator protein 3, MiaB family, Radical SAM K18285 - 2.5.1.120 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008414 503.0
DYD3_k127_5445200_10 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000000000000000000004543 114.0
DYD3_k127_5445200_11 SNARE associated Golgi protein - - - 0.0000000000000000001125 103.0
DYD3_k127_5445200_12 Acyl transferase domain K00645 - 2.3.1.39 0.00000003469 55.0
DYD3_k127_5445200_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005185 485.0
DYD3_k127_5445200_3 Phage integrase, N-terminal SAM-like domain K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002728 370.0
DYD3_k127_5445200_4 Threonine/Serine exporter, ThrE - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006252 349.0
DYD3_k127_5445200_5 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003736 358.0
DYD3_k127_5445200_6 KR domain K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004354 299.0
DYD3_k127_5445200_7 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008592 297.0
DYD3_k127_5445200_8 Peptidase C26 K01658,K01664 - 2.6.1.85,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000001062 239.0
DYD3_k127_5445200_9 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 - 4.6.1.12 0.00000000000000000000000000000000000000000000001598 189.0
DYD3_k127_5464286_0 L-lysine 6-monooxygenase (NADPH-requiring) K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002244 316.0
DYD3_k127_5464286_1 ferredoxin-NADP+ reductase activity - - - 0.00000000000000000000000006362 118.0
DYD3_k127_5481986_0 Homoserine dehydrogenase, NAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003924 567.0
DYD3_k127_5481986_1 epimerase dehydratase K01710,K01784 - 4.2.1.46,5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003477 504.0
DYD3_k127_5481986_10 Protein of unknown function (DUF3485) - - - 0.00000000000000000000000000000000000000000000000000000000166 208.0
DYD3_k127_5481986_11 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008830,GO:0009058,GO:0009059,GO:0009103,GO:0009987,GO:0016051,GO:0016853,GO:0016854,GO:0016857,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0045226,GO:0046379,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 5.1.3.13 0.000000000000000000000000000000000000000000000000004403 204.0
DYD3_k127_5481986_12 lipopolysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000004023 198.0
DYD3_k127_5481986_13 Polysaccharide pyruvyl transferase K16563 - - 0.0000000000000000000000000000000000000000000000004576 198.0
DYD3_k127_5481986_14 ATP-grasp - - - 0.0000000000000000000000000000000000000003502 156.0
DYD3_k127_5481986_15 Glycosyl transferase 4-like domain - - - 0.000000000000000000000000000000000000394 154.0
DYD3_k127_5481986_2 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00066 - 1.1.1.132 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002142 487.0
DYD3_k127_5481986_3 Transmembrane exosortase (Exosortase_EpsH) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002467 331.0
DYD3_k127_5481986_4 Protein involved in cellulose biosynthesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003354 319.0
DYD3_k127_5481986_5 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007522 297.0
DYD3_k127_5481986_6 Bacterial sugar transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001306 265.0
DYD3_k127_5481986_7 GlcNAc-PI de-N-acetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001799 269.0
DYD3_k127_5481986_8 COG0028 Thiamine pyrophosphate-requiring enzymes acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase K00156,K01652 - 1.2.5.1,2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000004682 244.0
DYD3_k127_5481986_9 Glycosyl transferase family 21 - - - 0.0000000000000000000000000000000000000000000000000000000001546 218.0
DYD3_k127_5513169_0 COGs COG1022 Long-chain acyl-CoA synthetase (AMP-forming) K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007404 567.0
DYD3_k127_5513169_1 - - - - 0.000000000000004924 82.0
DYD3_k127_5513169_2 G5 - - - 0.0000000000003098 82.0
DYD3_k127_5513169_3 Cache domain - - - 0.000000000448 68.0
DYD3_k127_5515101_0 3'-5' exonuclease K03684 - 3.1.13.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003171 372.0
DYD3_k127_5515101_1 hydrolase activity, acting on ester bonds - - - 0.00000000000000000000000000000000000000000000000000000000785 214.0
DYD3_k127_5515101_2 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000001264 164.0
DYD3_k127_5515101_3 Thioesterase K07107,K12500 - - 0.000000000000000000002331 108.0
DYD3_k127_5515101_4 Esterase of the alpha-beta hydrolase superfamily K07001 - - 0.0000000000000000001232 93.0
DYD3_k127_5515101_5 Iron-sulfur cluster assembly protein - - - 0.000000000000172 70.0
DYD3_k127_5539054_0 Nitronate monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000405 581.0
DYD3_k127_5588059_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 4.554e-284 881.0
DYD3_k127_5588059_1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008366 505.0
DYD3_k127_5588059_2 Glycosyl transferase 4-like K00754 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005491 425.0
DYD3_k127_5588059_3 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000002535 271.0
DYD3_k127_5588059_4 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000000001594 237.0
DYD3_k127_5588059_5 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.0000000000000000000000000000000000000000000000000000000003538 214.0
DYD3_k127_5588059_6 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.000000000000000000000000000002711 137.0
DYD3_k127_5588059_7 cysteine-type peptidase activity K19224,K21471 - - 0.000000000000000000000004795 116.0
DYD3_k127_5588059_8 biotin lipoate A B protein ligase K03524 - 6.3.4.15 0.0000000000000000000001353 108.0
DYD3_k127_5601819_0 TIGRFAM 40-residue YVTN family beta-propeller repeat protein - - - 0.0004202 53.0
DYD3_k127_5612656_0 Serine aminopeptidase, S33 K00433 - 1.11.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003287 479.0
DYD3_k127_5612656_1 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001054 281.0
DYD3_k127_5612656_2 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005465 254.0
DYD3_k127_5616796_0 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001506 285.0
DYD3_k127_5616796_1 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009136 257.0
DYD3_k127_5616796_2 impB/mucB/samB family K02346 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000001244 219.0
DYD3_k127_5616796_3 transcriptional regulator - - - 0.000000000000000000000000000000001073 135.0
DYD3_k127_5616796_4 - - - - 0.00000000000000000000000004588 117.0
DYD3_k127_5640765_0 - - - - 0.000000000009796 78.0
DYD3_k127_5640765_1 PFAM SPFH domain Band 7 family - - - 0.00000000148 63.0
DYD3_k127_5645169_0 glutamate synthase activity K00265,K00284,K22083 GO:0003674,GO:0003824,GO:0004355,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006541,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0015930,GO:0016020,GO:0016053,GO:0016491,GO:0016638,GO:0016639,GO:0019676,GO:0019740,GO:0019752,GO:0040007,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045181,GO:0046394,GO:0055114,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.13,1.4.1.14,1.4.7.1,2.1.1.21 0.0 1782.0
DYD3_k127_565625_0 PglZ domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000198 599.0
DYD3_k127_565625_1 ABC transporter transmembrane region K11085 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 461.0
DYD3_k127_565625_2 Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000000000000005594 207.0
DYD3_k127_565625_3 PFAM glycosyl transferase family 9 K02843 - - 0.000000000000000000000000000000000000000000000008583 185.0
DYD3_k127_565625_4 DUF based on E. rectale Gene description (DUF3880) K06320 - - 0.000000000000000000001739 107.0
DYD3_k127_565625_5 23S rRNA-intervening sequence protein - - - 0.000005703 54.0
DYD3_k127_5659387_0 Peptidase family M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002724 312.0
DYD3_k127_5659387_1 bacterial-type flagellum-dependent cell motility - - - 0.000000000257 70.0
DYD3_k127_5662831_0 Electron transfer flavoprotein domain K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003169 398.0
DYD3_k127_5662831_1 Electron transfer flavoprotein domain K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 308.0
DYD3_k127_5662831_2 Acyl-CoA dehydrogenase, C-terminal domain K00252 - 1.3.8.6 0.00000000000000000000000000000000000000000000000000000000000000001078 226.0
DYD3_k127_5671715_0 radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005597 562.0
DYD3_k127_5671715_1 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000001927 210.0
DYD3_k127_5671715_2 AraC-like ligand binding domain - - - 0.0000000000000000000000004953 108.0
DYD3_k127_5671715_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000005245 57.0
DYD3_k127_5682027_0 Ribonuclease E/G family K08301 - - 1.992e-199 638.0
DYD3_k127_5682027_1 Acyl-CoA dehydrogenase, C-terminal domain K18244 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001463 577.0
DYD3_k127_5682027_2 Peptidase family S58 K01266 - 3.4.11.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008146 468.0
DYD3_k127_5682027_3 PFAM Glucose Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 307.0
DYD3_k127_5682027_4 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.0000000000000000000000000000005019 126.0
DYD3_k127_5697945_0 WD40-like Beta Propeller Repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001539 434.0
DYD3_k127_5697945_1 Zn_pept - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 440.0
DYD3_k127_5697945_2 Redoxin K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000002297 205.0
DYD3_k127_5708480_0 Type II/IV secretion system protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007245 549.0
DYD3_k127_5708480_1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001783 295.0
DYD3_k127_5708480_10 - - - - 0.000000003287 64.0
DYD3_k127_5708480_2 ATPase-coupled sulfate transmembrane transporter activity K15496 - - 0.000000000000000000000000000000000000000000000000000000000000008016 226.0
DYD3_k127_5708480_3 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system - - - 0.00000000000000000000000000000000000000000000000000000000000005195 236.0
DYD3_k127_5708480_4 impB/mucB/samB family K02346 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000001512 229.0
DYD3_k127_5708480_5 Ferritin-like domain K02217 - 1.16.3.2 0.000000000000000000000000000000000000000000000003236 177.0
DYD3_k127_5708480_6 SpoU rRNA Methylase family K02533,K15396 - 2.1.1.200 0.00000000000000000000000000000000000000000000008902 178.0
DYD3_k127_5708480_7 4Fe-4S dicluster domain K00184 - - 0.00000000000000000000000000000000000000003943 163.0
DYD3_k127_5708480_8 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000542 169.0
DYD3_k127_5708480_9 Cytochrome c7 and related cytochrome c - - - 0.00000000000000000000000000000000008895 142.0
DYD3_k127_5734815_0 Dipeptidyl peptidase IV (DPP IV) N-terminal region K01278 - 3.4.14.5 6.859e-221 697.0
DYD3_k127_5734815_1 Serine dehydratase alpha chain K01752 - 4.3.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003485 374.0
DYD3_k127_5734815_2 Serine dehydratase beta chain K01752 - 4.3.1.17 0.00000000000000000000000000000000000000000000000000000000000000000003041 261.0
DYD3_k127_573727_0 Atp-dependent helicase - - - 1.923e-315 987.0
DYD3_k127_573727_1 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006261 282.0
DYD3_k127_573727_10 GAF modulated sigma54 specific transcriptional regulator, Fis family K21405 - - 0.00001821 53.0
DYD3_k127_573727_2 peptidyl-tyrosine sulfation K13992 - - 0.00000000000000000000000000000000000000000000000000000000000001032 225.0
DYD3_k127_573727_3 alginic acid biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000009436 207.0
DYD3_k127_573727_4 ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component - - - 0.0000000000000000000000000000000000000000000000000003586 189.0
DYD3_k127_573727_5 - - - - 0.000000000000000000000000000000000000000012 164.0
DYD3_k127_573727_6 Winged helix DNA-binding domain - - - 0.000000000000000000000000000000000000001053 151.0
DYD3_k127_573727_7 - - - - 0.00000000000000000000000000000000000006114 164.0
DYD3_k127_573727_8 COG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.00000000000000000000000112 115.0
DYD3_k127_573727_9 BetI-type transcriptional repressor, C-terminal K02167 - - 0.000007945 55.0
DYD3_k127_5740310_0 ABC transporter transmembrane region K18889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002223 570.0
DYD3_k127_5740310_1 PFAM LOR SDH bifunctional enzyme conserved region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005631 453.0
DYD3_k127_5740310_2 helicase superfamily c-terminal domain K04066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001462 404.0
DYD3_k127_5740310_3 Cytochrome C biogenesis protein transmembrane region K06196 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001729 273.0
DYD3_k127_5740310_4 Ferric uptake regulator family K03711 - - 0.00000000000000000000000000000000000001732 154.0
DYD3_k127_5740310_5 - - - - 0.000000000000056 82.0
DYD3_k127_5748696_0 Anthranilate synthase component I, N terminal region K01657 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002598 460.0
DYD3_k127_5748696_1 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000526 335.0
DYD3_k127_5748696_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005616 295.0
DYD3_k127_5748696_3 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.00000000000000000000000000000000000000000000000000002005 194.0
DYD3_k127_5748696_4 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K04750 - - 0.0000000000000000000000000000000000000000000000000007114 188.0
DYD3_k127_5748696_5 Maf-like protein K06287 - - 0.00000000000000000000000000000000000000000000001949 184.0
DYD3_k127_5748696_6 1,4-alpha-glucan branching enzyme activity K00700 - 2.4.1.18 0.000000000000002233 89.0
DYD3_k127_5750978_0 Sigma-54 interaction domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002498 496.0
DYD3_k127_5750978_1 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001546 297.0
DYD3_k127_5750978_2 VanZ like family - - - 0.000000000000004151 88.0
DYD3_k127_5750978_3 surface antigen K07001 - - 0.0000000002937 72.0
DYD3_k127_5751910_0 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 406.0
DYD3_k127_5751910_1 Protein of unknown function (DUF3365) - - - 0.000000000000129 75.0
DYD3_k127_5759245_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000004623 217.0
DYD3_k127_5759245_1 Belongs to the GHMP kinase family. GalK subfamily K00849 - 2.7.1.6 0.000000000000000000000000000006561 126.0
DYD3_k127_5769135_0 Glycosyl hydrolase family 63 C-terminal domain - - - 0.0 1060.0
DYD3_k127_5769135_1 Diguanylate cyclase K13924 - 2.1.1.80,3.1.1.61 0.0000000000002792 72.0
DYD3_k127_5777467_0 Threonine dehydratase K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 445.0
DYD3_k127_5777467_1 deaminated base DNA N-glycosylase activity K21929 GO:0003674,GO:0003824,GO:0004844,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0033958,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0048037,GO:0050896,GO:0051536,GO:0051539,GO:0051540,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0140097,GO:1901360 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000001904 226.0
DYD3_k127_5777467_2 Asparaginase K01424,K01444,K13051 - 3.4.19.5,3.5.1.1,3.5.1.26 0.00000000000000000000000000000000000000000000000000000000000001401 229.0
DYD3_k127_5779052_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 1.641e-266 833.0
DYD3_k127_5779052_1 SIS domain K06041 - 5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004009 369.0
DYD3_k127_5779052_2 DAHP synthetase I family K01627 - 2.5.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001838 334.0
DYD3_k127_5779052_3 haloacid dehalogenase-like hydrolase K03270 - 3.1.3.45 0.0000000000000000000000000000000000000000000000003907 184.0
DYD3_k127_5779052_4 - - - - 0.0000000000000000000000000001452 130.0
DYD3_k127_5779052_5 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.0000000000000000000008921 96.0
DYD3_k127_5779052_6 Lipopolysaccharide-assembly, LptC-related - - - 0.0000000000000000001348 103.0
DYD3_k127_5789726_0 Malate synthase K01638 - 2.3.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000218 398.0
DYD3_k127_5789726_1 Phosphoenolpyruvate phosphomutase K01637 - 4.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001502 392.0
DYD3_k127_5821436_0 antibiotic catabolic process K18235 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002712 424.0
DYD3_k127_5821436_1 Tetratricopeptide repeat K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 346.0
DYD3_k127_5821436_11 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.0000000000000000009461 89.0
DYD3_k127_5821436_12 Belongs to the arylamine N-acetyltransferase family K00675 - 2.3.1.118 0.000000000000000003112 91.0
DYD3_k127_5821436_13 UPF0391 membrane protein - - - 0.0000000000004189 71.0
DYD3_k127_5821436_14 - - - - 0.0003059 46.0
DYD3_k127_5821436_15 - - - - 0.0003324 50.0
DYD3_k127_5821436_2 OmpA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005132 279.0
DYD3_k127_5821436_3 EXOIII K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000001854 269.0
DYD3_k127_5821436_4 Protein of unknown function (DUF664) - - - 0.00000000000000000000000000000000000000000000000000001043 194.0
DYD3_k127_5821436_5 MerR, DNA binding K13639 - - 0.0000000000000000000000000000000000000000000000000003062 188.0
DYD3_k127_5821436_6 Cupin domain - - - 0.00000000000000000000000000000000000000000000000004036 189.0
DYD3_k127_5821436_7 beta-keto acid cleavage enzyme - - - 0.00000000000000000000000000000000000000000006654 166.0
DYD3_k127_5821436_8 Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase) - - - 0.000000000000000000000000000000000000000003247 168.0
DYD3_k127_5821436_9 ECF sigma factor - - - 0.0000000000000000000000000000000000000004449 163.0
DYD3_k127_5854314_0 Protein of unknown function (DUF1015) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002456 388.0
DYD3_k127_5854314_1 Protein of unknown function (DUF4242) - - - 0.00000000000000000000000000005728 121.0
DYD3_k127_5854314_2 Creatinine amidohydrolase - - - 0.000000000000003405 88.0
DYD3_k127_5854723_0 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000009552 232.0
DYD3_k127_5854723_1 Psort location Cytoplasmic, score 8.96 - - - 0.000000001625 70.0
DYD3_k127_5864775_0 surface antigen K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000002469 241.0
DYD3_k127_5864775_1 - - - - 0.000000000000000000000000000009181 126.0
DYD3_k127_5893298_0 aconitate hydratase K01681 - 4.2.1.3 0.0 1151.0
DYD3_k127_5893298_1 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006537 504.0
DYD3_k127_5893298_2 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00324 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005462 430.0
DYD3_k127_5893298_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002685 325.0
DYD3_k127_5893298_4 GlcNAc-PI de-N-acetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002739 309.0
DYD3_k127_5893298_5 Peptidase family S41 - - - 0.00000000000000000000000000000000000000000000002985 188.0
DYD3_k127_5893298_6 NAD NADP transhydrogenase alpha subunit K00324 - 1.6.1.2 0.000000000000000000000001554 117.0
DYD3_k127_5893298_7 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.00000000000000000000003122 103.0
DYD3_k127_5893298_8 - - - - 0.000000000000000003689 95.0
DYD3_k127_5893298_9 PFAM Rubredoxin-type Fe(Cys)4 protein - - - 0.000000000000005719 85.0
DYD3_k127_5893706_0 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K00658 - 2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007017 329.0
DYD3_k127_5893706_1 SMART phosphoesterase PHP domain protein K07053 - 3.1.3.97 0.00000000000000000000003941 108.0
DYD3_k127_5893706_2 - - - - 0.000000000000000002627 92.0
DYD3_k127_5910131_0 thiolester hydrolase activity K06889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007723 380.0
DYD3_k127_5910131_2 DinB superfamily - - - 0.000000000000000000000000000000000000000000000003407 178.0
DYD3_k127_5910131_3 Thioredoxin-like domain K03672 - 1.8.1.8 0.0000000000000000000000000000000000001355 147.0
DYD3_k127_5910131_4 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000001579 132.0
DYD3_k127_5910131_5 Domain of unknown function (DUF4112) - - - 0.00000000000000000000000000002421 129.0
DYD3_k127_5910131_7 SnoaL-like domain - - - 0.00000009027 63.0
DYD3_k127_5910131_8 Belongs to the peptidase S8 family - - - 0.0000001647 66.0
DYD3_k127_5910898_0 efflux transmembrane transporter activity K18300,K18308 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000275 432.0
DYD3_k127_5910898_1 phosphatidate phosphatase activity - - - 0.000000000000000000000000000000000000000004337 170.0
DYD3_k127_5914186_0 HxlR-like helix-turn-helix - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005779 389.0
DYD3_k127_5914186_1 Cupin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 398.0
DYD3_k127_5914186_2 oxidoreductase activity, acting on CH-OH group of donors - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 343.0
DYD3_k127_5914186_3 Berberine and berberine like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002039 318.0
DYD3_k127_5914186_4 Releases the N-terminal proline from various substrates K01259 - 3.4.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 291.0
DYD3_k127_5914186_5 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.000000000000000000000000000000000000000000000000000000000000004623 223.0
DYD3_k127_5914186_6 ECF sigma factor - - - 0.000000000000000000000000000000000000000001524 162.0
DYD3_k127_5914186_7 Putative metal-binding motif K02674 - - 0.0000000000000143 85.0
DYD3_k127_5914186_9 4-Hydroxyphenylpyruvate dioxygenase K05606,K17315 - 5.1.99.1 0.0000000000002963 77.0
DYD3_k127_5917905_0 AICARFT/IMPCHase bienzyme K00602 - 2.1.2.3,3.5.4.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005502 582.0
DYD3_k127_5917905_1 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 GO:0003674,GO:0003824,GO:0004125,GO:0006139,GO:0006399,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016740,GO:0016785,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034654,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097056,GO:0140098,GO:0140101,GO:1901360,GO:1901362,GO:1901576 2.9.1.1 0.0000000000000000000000000000000000000000000000000001629 194.0
DYD3_k127_5917905_2 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.000000000000000000000000000000000000000000000000007509 198.0
DYD3_k127_5917905_3 HAD-hyrolase-like K03273 - 3.1.3.82,3.1.3.83 0.000000000000000000000000000000000000000000000005934 188.0
DYD3_k127_594540_0 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007079 539.0
DYD3_k127_594540_1 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000001992 172.0
DYD3_k127_594540_2 Fatty acid desaturase K10255 - 1.14.19.23,1.14.19.45 0.0008481 45.0
DYD3_k127_5956691_0 Uncharacterized protein family (UPF0051) K09014 - - 1.809e-249 789.0
DYD3_k127_5956691_1 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003552 461.0
DYD3_k127_5956691_2 Uncharacterized protein family (UPF0051) K09015 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001634 426.0
DYD3_k127_5956691_3 ABC transporter K09013 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003906 393.0
DYD3_k127_5956691_4 TIGRFAM SUF system FeS K04488 - - 0.000000000000000000000000000000000000000000001906 168.0
DYD3_k127_5956691_5 HTH domain - - - 0.00000000000000000000000000000000000001148 153.0
DYD3_k127_5962387_0 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006044 565.0
DYD3_k127_5964337_0 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001457 605.0
DYD3_k127_5964337_1 Belongs to the enoyl-CoA hydratase isomerase family K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 382.0
DYD3_k127_5964349_0 tRNA synthetases class II (D, K and N) K01893 - 6.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005045 553.0
DYD3_k127_5964349_1 COG1520 FOG WD40-like repeat - - - 0.000000005603 70.0
DYD3_k127_5964349_2 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.0002544 44.0
DYD3_k127_5975537_0 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000595 423.0
DYD3_k127_5975537_1 MatE K03327 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001742 396.0
DYD3_k127_5975537_2 Protein kinase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002942 376.0
DYD3_k127_5975537_3 Aminotransferase class-V - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 361.0
DYD3_k127_5975537_4 Cell wall formation K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000291 353.0
DYD3_k127_5975537_5 haloacid dehalogenase-like hydrolase K01079 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000006459 198.0
DYD3_k127_5975537_6 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000002461 210.0
DYD3_k127_5975537_7 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.000000000000000001522 86.0
DYD3_k127_6011201_0 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001629 491.0
DYD3_k127_6011201_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009232 420.0
DYD3_k127_6011201_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000017 290.0
DYD3_k127_6011201_3 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.00000000000000000000000000000000000000000000000000000000008208 205.0
DYD3_k127_6011201_4 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.0000000000000000000000000000000000000000000000000000001143 197.0
DYD3_k127_6011201_5 Ribosomal protein L17 K02879 - - 0.000000000000000000000000000000003214 145.0
DYD3_k127_6011201_6 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.000000000000000000009296 95.0
DYD3_k127_6011201_7 Ribosomal protein L36 K02919 - - 0.000000000000001176 78.0
DYD3_k127_6011201_8 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.000000001106 61.0
DYD3_k127_6011201_9 Polysaccharide biosynthesis protein K15856 - 1.1.1.281 0.000002324 59.0
DYD3_k127_6038062_0 Belongs to the formate--tetrahydrofolate ligase family K01938 - 6.3.4.3 3.592e-219 694.0
DYD3_k127_6038062_1 TatD family K03424 - - 0.000000000000000000000000000000000000000000000000000000006998 205.0
DYD3_k127_6038062_2 Endoribonuclease L-PSP K09022 - 3.5.99.10 0.000000000000000000000000000000000000000001865 160.0
DYD3_k127_6038062_3 PFAM diacylglycerol kinase catalytic region - - - 0.0000000000000000000000000000000000000009763 161.0
DYD3_k127_6038062_4 - - - - 0.0000000008509 71.0
DYD3_k127_6041860_0 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007735 294.0
DYD3_k127_6041860_1 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.00000000000000000000000000000000000000000000002726 174.0
DYD3_k127_6041860_2 Belongs to the NiCoT transporter (TC 2.A.52) family K07241 - - 0.00000000000000000000000008174 117.0
DYD3_k127_6041860_3 - - - - 0.0000005464 55.0
DYD3_k127_6049500_0 Phosphate acetyl/butaryl transferase K00625 - 2.3.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006189 302.0
DYD3_k127_6049500_1 STAS domain K04749 - - 0.000000000000000000000000000000000000000004414 156.0
DYD3_k127_6049500_2 COG2172 Anti-sigma regulatory factor (Ser Thr protein kinase) K04757 - 2.7.11.1 0.00000000000000000002164 96.0
DYD3_k127_6061674_0 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000001381 191.0
DYD3_k127_6061674_1 SnoaL-like domain - - - 0.00000000000000005763 87.0
DYD3_k127_6061674_2 domain, Protein K01183 - 3.2.1.14 0.000001661 55.0
DYD3_k127_6065306_0 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) K01876 - 6.1.1.12 1.162e-195 626.0
DYD3_k127_6065306_1 7TM receptor with intracellular HD hydrolase K07037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006847 469.0
DYD3_k127_6065306_10 sequence-specific DNA binding K07729 - - 0.0000000000000000000004138 102.0
DYD3_k127_6065306_11 PFAM phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 K02768 - 2.7.1.202 0.00000000000000000001114 98.0
DYD3_k127_6065306_12 - - - - 0.0000000003501 66.0
DYD3_k127_6065306_2 PhoH-like protein K06217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 415.0
DYD3_k127_6065306_3 ABC1 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002721 406.0
DYD3_k127_6065306_4 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006108 376.0
DYD3_k127_6065306_5 Acts as a magnesium transporter K06213 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005435 328.0
DYD3_k127_6065306_6 MOFRL family K11529 - 2.7.1.165 0.0000000000000000000000000000000000000000000000000000000001166 218.0
DYD3_k127_6065306_7 CBS domain containing protein K03699 - - 0.000000000000000000000000000000000000000001813 174.0
DYD3_k127_6065306_8 Transporter associated domain - - - 0.0000000000000000000000000000000000000605 158.0
DYD3_k127_6065306_9 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.0000000000000000000000000000007314 130.0
DYD3_k127_6067479_0 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002984 325.0
DYD3_k127_6067479_1 Phosphoribosylglycinamide synthetase, C domain K01945 - 6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000004098 257.0
DYD3_k127_6067479_2 Cys/Met metabolism PLP-dependent enzyme K01758 - 4.4.1.1 0.0000000000000000000000000000000000000000005382 160.0
DYD3_k127_6089327_0 protein kinase activity K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000009063 234.0
DYD3_k127_6089327_1 PFAM S23 ribosomal protein - - - 0.00000000000000000004354 94.0
DYD3_k127_6092549_0 PhoD-like phosphatase K01113 - 3.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 348.0
DYD3_k127_6092549_1 L,D-transpeptidase catalytic domain K21470 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002364 319.0
DYD3_k127_6092549_2 Domain of unknown function (DUF4126) - - - 0.000000000000000000000000000000000000000001045 167.0
DYD3_k127_6092549_3 Putative peptidoglycan binding domain K21470 - - 0.0001128 53.0
DYD3_k127_6093064_0 Dehydratase family K22396 - 4.2.1.82 1.822e-296 923.0
DYD3_k127_6093064_1 PFAM aromatic amino acid beta-eliminating lyase threonine aldolase K01667,K01668 - 4.1.99.1,4.1.99.2 4.105e-199 633.0
DYD3_k127_6095192_0 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000008997 262.0
DYD3_k127_6095192_1 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 0.000000000000000000000000000000000000000000000000000000000001147 230.0
DYD3_k127_6095192_2 SPFH domain-Band 7 family - - - 0.000000000000000000000005805 103.0
DYD3_k127_6110667_0 Bacterial transcriptional activator domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001779 619.0
DYD3_k127_6110667_1 Pyridoxamine 5'-phosphate oxidase K07006 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003418 298.0
DYD3_k127_6112055_0 Protein of unknown function DUF58 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003084 277.0
DYD3_k127_6112055_1 bacterial-type flagellum-dependent cell motility K01317 - 3.4.21.10 0.00000000000000000000000000000000000000003961 173.0
DYD3_k127_6115869_0 DNA-directed DNA polymerase K02337,K14162 - 2.7.7.7 6.114e-197 639.0
DYD3_k127_6115869_1 Protein of unknown function DUF72 - - - 0.00000000000000000000003883 109.0
DYD3_k127_6117736_0 metallopeptidase activity K01993,K13408,K16922 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 409.0
DYD3_k127_6117736_1 Biotin-lipoyl like - - - 0.00000001115 65.0
DYD3_k127_612064_0 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 1.4e-274 856.0
DYD3_k127_612064_1 Protein kinase domain K12132 - 2.7.11.1 0.0005698 51.0
DYD3_k127_6125866_0 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007432 319.0
DYD3_k127_6125866_1 Calcineurin-like phosphoesterase K03269 - 3.6.1.54 0.000000000000000000000000000000000000185 151.0
DYD3_k127_6125866_2 Thioesterase-like superfamily K07107 - - 0.000000000000000000000000004403 116.0
DYD3_k127_6125866_3 - - - - 0.0000000000009754 74.0
DYD3_k127_6134289_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K03320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005622 573.0
DYD3_k127_6134289_1 Protein of unknown function, DUF255 K06888 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 454.0
DYD3_k127_6134289_10 Histidine kinase-like ATPase domain K04749,K04757 - 2.7.11.1 0.0000000000000003322 83.0
DYD3_k127_6134289_11 STAS domain K06378 - - 0.00000000000002366 77.0
DYD3_k127_6134289_2 DNA polymerase K02347 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002668 442.0
DYD3_k127_6134289_3 Serine phosphatase RsbU, regulator of sigma subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002372 327.0
DYD3_k127_6134289_4 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009689 293.0
DYD3_k127_6134289_5 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000002343 276.0
DYD3_k127_6134289_6 Serine aminopeptidase, S33 K01259 - 3.4.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000001904 252.0
DYD3_k127_6134289_7 Esterase of the alpha-beta hydrolase superfamily K07001 - - 0.00000000000000000000000000000000000000000000000000000000001582 220.0
DYD3_k127_6134289_8 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000001297 181.0
DYD3_k127_6134289_9 GAF domain-containing protein K08968 - 1.8.4.14 0.0000000000000000000000001198 111.0
DYD3_k127_6134633_0 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K16363 - 3.5.1.108,4.2.1.59 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000463 426.0
DYD3_k127_6134633_1 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009611 289.0
DYD3_k127_6134633_2 Surface antigen K07277 - - 0.0000000000000000000000000000000000000000002994 161.0
DYD3_k127_6134633_3 Outer membrane protein (OmpH-like) K06142 - - 0.000000000000000004742 95.0
DYD3_k127_6135875_0 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004354 322.0
DYD3_k127_6135875_1 Methylates ribosomal protein L11 K02687 - - 0.000000000000000000000000000000000000006938 159.0
DYD3_k127_6135875_2 Ribosomal RNA small subunit methyltransferase K09761 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016436,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070042,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.193 0.0003683 53.0
DYD3_k127_614025_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008178 318.0
DYD3_k127_614025_1 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.0000000000000000000000000000000000000202 162.0
DYD3_k127_614025_2 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.00000000000000000000003473 100.0
DYD3_k127_6150434_0 Cys/Met metabolism PLP-dependent enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008653 455.0
DYD3_k127_6150434_1 Histidine kinase-like ATPases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003571 347.0
DYD3_k127_6150434_2 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 325.0
DYD3_k127_6150434_3 - - - - 0.00000000000000000004238 104.0
DYD3_k127_6161407_0 Peptidase family M3 K08602 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 595.0
DYD3_k127_6161407_1 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877 - 0.00000000000000000000000007692 109.0
DYD3_k127_6162629_0 DALR_2 K01883 - 6.1.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001881 364.0
DYD3_k127_6162765_0 of the major facilitator superfamily K08151 - - 0.00000000000000000000000000000000000000000000000000000000000000000005137 246.0
DYD3_k127_6162765_1 Signal peptidase, peptidase S26 K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000000000000001349 235.0
DYD3_k127_6162765_2 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.0000000000000000000000000000000000000006892 164.0
DYD3_k127_6183297_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 0.0 1032.0
DYD3_k127_6183297_1 4Fe-4S binding domain K00124 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002752 433.0
DYD3_k127_6183297_2 Polysulphide reductase, NrfD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002142 307.0
DYD3_k127_6183778_0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain K01955 - 6.3.5.5 0.0 1616.0
DYD3_k127_6183778_1 UDP binding domain K13015 - 1.1.1.136 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001799 569.0
DYD3_k127_6183778_2 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005672 445.0
DYD3_k127_6183778_3 O-acyltransferase activity K13018 - 2.3.1.201 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001316 275.0
DYD3_k127_6183778_4 RmlD substrate binding domain K15856 - 1.1.1.281 0.0000000000000000000000000000000000000000000000000205 192.0
DYD3_k127_6183778_5 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.00000000000000000000000000000000000000000009801 161.0
DYD3_k127_6183778_6 Belongs to the CarB family K01955 - 6.3.5.5 0.000000000004557 65.0
DYD3_k127_6186915_0 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004143 342.0
DYD3_k127_6186915_1 - - - - 0.00000001543 68.0
DYD3_k127_6235802_0 Formate dehydrogenase alpha subunit K00123,K05299 - 1.17.1.10,1.17.1.9 6.223e-232 753.0
DYD3_k127_6235802_1 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000003094 214.0
DYD3_k127_6235802_2 Zinc-binding dehydrogenase K00060 - 1.1.1.103 0.000000000000000000000000000000000000000006131 162.0
DYD3_k127_6235802_3 - - - - 0.000000000000000001025 103.0
DYD3_k127_6237864_0 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 307.0
DYD3_k127_6237864_1 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.000000000000000000000000000000000000000000000009475 176.0
DYD3_k127_6237864_2 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.0000000000000000000000000000000000002047 154.0
DYD3_k127_6237864_3 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.0003058 49.0
DYD3_k127_6246602_0 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 601.0
DYD3_k127_6246602_1 Peptidase family S58 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003953 488.0
DYD3_k127_6246602_10 DoxX K15977 - - 0.0000000000000000000000000000000000003343 146.0
DYD3_k127_6246602_11 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02652 - - 0.000000002025 60.0
DYD3_k127_6246602_12 - - - - 0.00000005973 66.0
DYD3_k127_6246602_2 Beta-lactamase class C and other penicillin binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004484 360.0
DYD3_k127_6246602_3 Proline dehydrogenase K00318 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004506 347.0
DYD3_k127_6246602_4 Belongs to the ompA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000718 275.0
DYD3_k127_6246602_5 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.00000000000000000000000000000000000000000000000000000000000000000000000005788 264.0
DYD3_k127_6246602_6 TIGRFAM intracellular protease, PfpI family K05520 - 3.5.1.124 0.0000000000000000000000000000000000000000000000000000000004334 226.0
DYD3_k127_6246602_7 Mazg nucleotide pyrophosphohydrolase K00800 - 2.5.1.19 0.00000000000000000000000000000000000000000000002677 183.0
DYD3_k127_6246602_8 light absorption - - - 0.0000000000000000000000000000000000000156 150.0
DYD3_k127_6246602_9 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000000000000000000000003714 148.0
DYD3_k127_6259904_0 phosphate-selective porin O and P K07221 - - 0.00000001498 66.0
DYD3_k127_6259904_1 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.0000003022 54.0
DYD3_k127_6298139_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 565.0
DYD3_k127_6298139_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001523 345.0
DYD3_k127_6298139_2 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000008996 218.0
DYD3_k127_6298139_3 Biotin-lipoyl like K01993 - - 0.000000000000000000000000000000000000000000000001914 193.0
DYD3_k127_6298139_4 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.0000000000000000000000005302 106.0
DYD3_k127_6298139_5 Bacterial regulatory proteins, tetR family K09017 - - 0.0000000000000000003035 96.0
DYD3_k127_6298139_6 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 GO:0008150,GO:0040007 - 0.00000001343 60.0
DYD3_k127_6308992_0 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001673 442.0
DYD3_k127_6308992_1 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0003674,GO:0003824,GO:0004325,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016020,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0040007,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0046148,GO:0046483,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051537,GO:0051540,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.000000000000000000000000000000000000003372 148.0
DYD3_k127_6315503_0 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007259 526.0
DYD3_k127_6315503_1 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004731,GO:0006082,GO:0006139,GO:0006144,GO:0006168,GO:0006520,GO:0006555,GO:0006725,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009112,GO:0009113,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0017061,GO:0017144,GO:0018130,GO:0019438,GO:0019509,GO:0019752,GO:0034641,GO:0034654,GO:0042440,GO:0043094,GO:0043096,GO:0043101,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046083,GO:0046084,GO:0046112,GO:0046148,GO:0046394,GO:0046483,GO:0055086,GO:0071265,GO:0071267,GO:0071704,GO:0072521,GO:0072522,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006115 397.0
DYD3_k127_6315503_2 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002467 381.0
DYD3_k127_6315503_3 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.0000000000000000000000000000000000000000000000000000000000000000003537 236.0
DYD3_k127_6315503_4 PFAM class II aldolase adducin family protein K01628 - 4.1.2.17 0.000000000000000000000000000000000000000000000000000000000000000003617 236.0
DYD3_k127_6315503_5 thiolester hydrolase activity K06889 - - 0.0000000000000000000000001349 115.0
DYD3_k127_6315503_6 positive regulation of type IV pilus biogenesis K07343 - - 0.00000000000000000006474 93.0
DYD3_k127_6319282_0 2-oxoglutarate dehydrogenase C-terminal K00164 - 1.2.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005186 315.0
DYD3_k127_6319282_1 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00111 - 1.1.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000004582 252.0
DYD3_k127_6329862_0 Peptidase family M1 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004376 548.0
DYD3_k127_6329862_1 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002311 391.0
DYD3_k127_6329862_2 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000000000000000000000000003769 235.0
DYD3_k127_6329862_3 ArsR family transcriptional regulator - - - 0.00000000000000000000000000000007329 129.0
DYD3_k127_6329862_4 Protein kinase domain K12132 - 2.7.11.1 0.00001183 49.0
DYD3_k127_6340467_0 hydroxymethylglutaryl-CoA reductase (NADPH) activity K00021 - 1.1.1.34 1.412e-208 666.0
DYD3_k127_6340467_1 DNA restriction-modification system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007532 418.0
DYD3_k127_6340467_10 SNF2 family N-terminal domain - - - 0.0000000000000000000000000000007143 141.0
DYD3_k127_6340467_11 Alpha beta hydrolase - - - 0.00000000000000000000000009521 117.0
DYD3_k127_6340467_12 PFAM S23 ribosomal protein - - - 0.00000000000000000004868 104.0
DYD3_k127_6340467_13 ABC1 family K03688 - - 0.000000000000002306 90.0
DYD3_k127_6340467_14 Carbon monoxide dehydrogenase subunit G (CoxG) K09386 - - 0.00000000000001301 81.0
DYD3_k127_6340467_2 Glycosyl transferase family 21 K00721 - 2.4.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005014 289.0
DYD3_k127_6340467_3 Protein of unknown function (DUF2167) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001142 268.0
DYD3_k127_6340467_4 Peptidase U61, LD-carboxypeptidase A K01297 - 3.4.17.13 0.00000000000000000000000000000000000000000000000000000000000000000000000002116 262.0
DYD3_k127_6340467_5 glycosyl transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000007862 248.0
DYD3_k127_6340467_6 Protein involved in meta-pathway of phenol degradation - - - 0.0000000000000000000000000000000000000000000000000000000001032 212.0
DYD3_k127_6340467_7 HAD-hyrolase-like K06019 - 3.6.1.1 0.00000000000000000000000000000000000000000000000000000005434 205.0
DYD3_k127_6340467_8 thiolester hydrolase activity K01179,K06889,K10773,K15853 - 3.2.1.4,4.2.99.18 0.000000000000000000000000000000000000000000000001799 183.0
DYD3_k127_6340467_9 NUDIX domain - - - 0.0000000000000000000000000000000006326 138.0
DYD3_k127_6345632_0 COG0659 Sulfate permease and related transporters (MFS superfamily) K01673,K03321 - 4.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 546.0
DYD3_k127_6345632_1 Peptidase S46 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 534.0
DYD3_k127_6345632_2 Domain of unknown function (DUF4382) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005666 284.0
DYD3_k127_6345632_3 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000001553 225.0
DYD3_k127_6345632_4 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000000000000000000000000000000000678 198.0
DYD3_k127_6345632_5 - - - - 0.000000000000000000000000000000000001613 152.0
DYD3_k127_6345632_6 - - - - 0.00000000000000000000000000001492 132.0
DYD3_k127_6345632_7 Glycogen recognition site of AMP-activated protein kinase - - - 0.000000000000000000000000000191 121.0
DYD3_k127_6345632_8 DinB superfamily - - - 0.000000000000126 80.0
DYD3_k127_6357339_0 Fumarase C C-terminus K01744 - 4.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006638 428.0
DYD3_k127_6357339_1 Glycosyltransferase Family 4 K14335 - - 0.0000000000000000000000000000000002621 137.0
DYD3_k127_6357339_2 Cupin 2, conserved barrel domain protein - - - 0.00000000000001358 78.0
DYD3_k127_6360107_0 Belongs to the LDH2 MDH2 oxidoreductase family K13574 - - 0.00000000000000000000000000000000000000000000000000000000000000000002312 251.0
DYD3_k127_6360107_1 ChrR Cupin-like domain - - - 0.000000000000000004235 98.0
DYD3_k127_6360107_2 Protein of unknown function (DUF1722) - - - 0.0000000000001113 78.0
DYD3_k127_6363286_0 COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases K00266 - 1.4.1.13,1.4.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004002 612.0
DYD3_k127_6363286_1 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001492 380.0
DYD3_k127_6363286_2 Mycolic acid cyclopropane synthetase - - - 0.0000000000000000000000000000000000000000000000000000000000000000004676 239.0
DYD3_k127_6363286_3 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000003018 173.0
DYD3_k127_6363286_4 PFAM Glyoxalase bleomycin resistance protein dioxygenase K06996 - - 0.00000000000000000000000000000000000001724 156.0
DYD3_k127_6373989_0 Phosphoribulokinase / Uridine kinase family K00876 - 2.7.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000001926 251.0
DYD3_k127_6373989_1 COG1226 Kef-type K transport systems - - - 0.000000000000000000000000000000000000000000001651 177.0
DYD3_k127_6387481_0 Saccharopine dehydrogenase C-terminal domain K19064 - 1.4.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005426 483.0
DYD3_k127_6387481_1 Thioredoxin - - - 0.0000000000000000000000000000000000002862 148.0
DYD3_k127_6387481_2 PFAM Bacterial regulatory proteins, tetR family - - - 0.000000006891 64.0
DYD3_k127_6392189_0 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007402 314.0
DYD3_k127_6392189_1 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000003754 276.0
DYD3_k127_6392189_2 HD superfamily hydrolase involved in NAD metabolism K00950 - 2.7.6.3 0.0000000000000000000000000000000000000000000259 167.0
DYD3_k127_6392189_3 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.0000000000000000000000000000000000000000003276 161.0
DYD3_k127_6392189_4 TIGRFAM 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 - 2.7.6.3 0.000000000000000000000000007332 113.0
DYD3_k127_6395048_0 Ami_3 K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008324 365.0
DYD3_k127_6395048_1 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001372 293.0
DYD3_k127_6395048_2 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.0000000000000000000000000000000000000000000000000000001825 200.0
DYD3_k127_6395048_3 peptidyl-tyrosine sulfation - - - 0.00000000000000000003761 106.0
DYD3_k127_6409402_0 ArgK protein K07588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004284 404.0
DYD3_k127_6409402_1 Methylmalonyl-CoA mutase K01848,K11942 - 5.4.99.13,5.4.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006148 301.0
DYD3_k127_6419082_0 ROK family K00845 - 2.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004554 423.0
DYD3_k127_6419082_1 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001788 260.0
DYD3_k127_6419082_2 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.00000000000000000000000000000000000000000000000000427 182.0
DYD3_k127_6419082_3 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway - - - 0.000000000000000000000000000000000000721 141.0
DYD3_k127_6420784_0 ATPases associated with a variety of cellular activities - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008146 415.0
DYD3_k127_6420784_1 Type II secretion system (T2SS), protein F K12511 - - 0.0000000000000000000000000000000000000000000000000000000000006908 217.0
DYD3_k127_6420784_2 type II secretion system protein K12510 - - 0.000000000000000000000000000000000000000000000001028 179.0
DYD3_k127_6420784_3 Uncharacterized ACR, COG1430 K09005 - - 0.0000000000000001648 92.0
DYD3_k127_6434264_0 Sodium Bile acid symporter family K03325 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005361 517.0
DYD3_k127_6434264_1 Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000000000000000000000000000000000161 233.0
DYD3_k127_6434264_2 - - - - 0.0000000000000000000000000000004808 132.0
DYD3_k127_6434264_3 COG3209 Rhs family protein - - - 0.00000108 58.0
DYD3_k127_6438661_1 ABC-type multidrug transport system ATPase and permease K06147,K11085 - - 0.0000009881 50.0
DYD3_k127_6439645_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000004743 182.0
DYD3_k127_6477873_0 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K19802 - 5.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003847 411.0
DYD3_k127_6477873_1 Histone deacetylase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007643 274.0
DYD3_k127_6477873_2 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000002476 237.0
DYD3_k127_6477873_3 - - - - 0.0000000000000005936 91.0
DYD3_k127_6477873_4 Zincin-like metallopeptidase - - - 0.0000000006856 66.0
DYD3_k127_6477873_5 ubiE/COQ5 methyltransferase family - - - 0.0000006999 59.0
DYD3_k127_6477873_6 - - - - 0.0002545 51.0
DYD3_k127_6496539_0 Protein of unknown function (DUF512) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006305 465.0
DYD3_k127_6496539_1 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 448.0
DYD3_k127_6496539_10 Belongs to the acylphosphatase family K01512 GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818 3.6.1.7 0.0000000000007093 79.0
DYD3_k127_6496539_11 PFAM Tetratricopeptide TPR_2 repeat protein - - - 0.00002915 54.0
DYD3_k127_6496539_2 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008924 345.0
DYD3_k127_6496539_3 ubiE/COQ5 methyltransferase family K07755 - 2.1.1.137 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002736 344.0
DYD3_k127_6496539_4 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus K00057 - 1.1.1.94 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006045 305.0
DYD3_k127_6496539_5 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000001451 266.0
DYD3_k127_6496539_6 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000006404 242.0
DYD3_k127_6496539_7 PFAM SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000000000000000001662 234.0
DYD3_k127_6496539_8 helix_turn_helix, mercury resistance - - - 0.000000000000000000000000000000000000000000004465 166.0
DYD3_k127_6496539_9 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.000000000000000000000000000000007113 147.0
DYD3_k127_6531218_0 Ppx/GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004501 416.0
DYD3_k127_6531218_1 Plays a role in the regulation of phosphate uptake K02039 - - 0.0000000000000000000000000000000000000000000000001771 186.0
DYD3_k127_6531218_2 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000007848 86.0
DYD3_k127_65340_0 Domain of unknown function (DUF1929) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000726 521.0
DYD3_k127_65340_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007582 421.0
DYD3_k127_65340_2 HNH endonuclease K07454 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006406 258.0
DYD3_k127_65340_3 Putative restriction endonuclease - - - 0.000000000000000000000000000000000000000000001571 172.0
DYD3_k127_65340_4 nUDIX hydrolase K03574,K08320 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008413,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017110,GO:0030145,GO:0033554,GO:0034641,GO:0035539,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044715,GO:0044716,GO:0046483,GO:0046872,GO:0046914,GO:0047429,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 3.6.1.55,3.6.1.65 0.000000000000000000000000001244 118.0
DYD3_k127_65340_5 Cupin domain - - - 0.0000000000000000007152 94.0
DYD3_k127_65340_7 PFAM regulatory protein TetR - - - 0.0000000002041 70.0
DYD3_k127_6536870_0 Hsp70 protein K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 583.0
DYD3_k127_6536870_1 Penicillin-binding Protein dimerisation domain K05515 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002631 539.0
DYD3_k127_6536870_2 Cell cycle protein K05837 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 446.0
DYD3_k127_6536870_3 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008272 363.0
DYD3_k127_6536870_4 Mur ligase middle domain K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000001069 261.0
DYD3_k127_6536870_5 rod shape-determining protein MreC K03570 - - 0.0000000000000000000000000000000000000000000002452 189.0
DYD3_k127_6536870_6 rod shape-determining protein MreD K03571 - - 0.000000000000000000000000002208 128.0
DYD3_k127_6546937_0 transposase and inactivated derivatives, IS30 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 416.0
DYD3_k127_6546937_1 IstB-like ATP binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003176 332.0
DYD3_k127_6552071_0 acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 333.0
DYD3_k127_6552071_1 NmrA-like family K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000001427 203.0
DYD3_k127_6552071_2 PAP2 superfamily - - - 0.000000000000000236 93.0
DYD3_k127_6559512_0 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 1.21e-213 687.0
DYD3_k127_6559512_1 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004305 501.0
DYD3_k127_6559512_2 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005532 500.0
DYD3_k127_6559512_3 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 473.0
DYD3_k127_6559512_4 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002392 268.0
DYD3_k127_6559512_5 lytic transglycosylase activity K08309 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0008150,GO:0008152,GO:0008932,GO:0008933,GO:0009056,GO:0009057,GO:0009253,GO:0009274,GO:0016740,GO:0016757,GO:0030203,GO:0030288,GO:0030312,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044464,GO:0061783,GO:0071704,GO:0071944,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 - 0.000000000000000000000000000000000000000000000006802 177.0
DYD3_k127_6559512_6 - - - - 0.00000001733 60.0
DYD3_k127_6559512_7 Glu-tRNAGln amidotransferase C subunit - - - 0.000004213 55.0
DYD3_k127_6564604_0 ATPase P-type (Transporting), HAD superfamily, subfamily IC K01535,K01537 - 3.6.3.6,3.6.3.8 2.607e-306 959.0
DYD3_k127_6564604_1 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003339 293.0
DYD3_k127_6564604_2 Sodium/calcium exchanger protein K07301 - - 0.00000000000000000000000000000000000000000000000000000001706 210.0
DYD3_k127_6564604_3 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000007995 205.0
DYD3_k127_6564604_4 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000002823 162.0
DYD3_k127_6564604_5 Acid phosphatase homologues K19302 - 3.6.1.27 0.0000000000000000000001864 104.0
DYD3_k127_6564604_7 Universal stress protein - - - 0.00000001316 66.0
DYD3_k127_6564604_8 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.000224 48.0
DYD3_k127_6569409_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003658 303.0
DYD3_k127_6569409_1 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.0000000000000000000000000000000000000000009014 163.0
DYD3_k127_6597912_0 Pfam:DUF955 K07110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 490.0
DYD3_k127_6597912_1 LytR cell envelope-related transcriptional attenuator - - - 0.0000000000003451 73.0
DYD3_k127_6597912_2 Malate synthase K01638 - 2.3.3.9 0.00007002 48.0
DYD3_k127_6600290_0 YHS domain K01533 - 3.6.3.4 0.0000000000000000000000000000000000000000000000001419 177.0
DYD3_k127_6600290_1 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division K20543 - - 0.00000000003243 75.0
DYD3_k127_661207_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 424.0
DYD3_k127_661207_1 chloride channel K03281 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002444 370.0
DYD3_k127_661207_2 ABC transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009542 307.0
DYD3_k127_661207_3 Permease MlaE K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003154 253.0
DYD3_k127_661207_4 MlaD protein K02067 - - 0.0000000000000000000000000000000000000000000000000004538 205.0
DYD3_k127_661207_5 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 0.000000000000000000000000000000000000000000003764 167.0
DYD3_k127_661207_6 NUDIX domain - - - 0.00000000000000000000000000000000000000005673 171.0
DYD3_k127_661207_7 Helix-turn-helix domain - - - 0.0000000000000000000000000000000005541 147.0
DYD3_k127_661207_8 - - - - 0.000000004289 63.0
DYD3_k127_661207_9 23S rRNA-intervening sequence protein - - - 0.000001383 55.0
DYD3_k127_6614516_0 Fructose-bisphosphate aldolase class-II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004869 537.0
DYD3_k127_6614516_1 Pyruvate kinase, barrel domain K00873 - 2.7.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000393 489.0
DYD3_k127_6614516_2 Phosphoglucose isomerase K01810 - 5.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002625 411.0
DYD3_k127_6614516_3 Metallo-beta-lactamase superfamily K06167 - 3.1.4.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002748 310.0
DYD3_k127_6614516_4 YtxH-like protein - - - 0.00000004357 61.0
DYD3_k127_6629148_0 amine dehydrogenase activity K17285 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 509.0
DYD3_k127_6629148_1 Aldehyde dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002632 273.0
DYD3_k127_6629148_2 Endoribonuclease L-PSP - - - 0.000000000000000000000000000000000000004165 152.0
DYD3_k127_6629148_3 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000009955 116.0
DYD3_k127_6629148_4 - - - - 0.000000000000000003036 96.0
DYD3_k127_6662710_0 Carboxyl transferase domain - - - 5.187e-238 745.0
DYD3_k127_6662710_1 Subtilase family - - - 0.000000000000000000000000000000000000000000000000000009024 217.0
DYD3_k127_6662710_2 PFAM TPR repeat-containing protein - - - 0.000000000002594 81.0
DYD3_k127_6663659_0 histidine kinase A domain protein domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002383 324.0
DYD3_k127_6663659_1 HAMP domain - - - 0.00000000000000000000000000000000000000000000000000000003113 207.0
DYD3_k127_6669278_0 Protein kinase domain K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000009159 265.0
DYD3_k127_6669278_1 isoleucine patch - - - 0.00000000000000000000000000000000000000000000000000000001971 203.0
DYD3_k127_6669278_2 peptidyl-tyrosine sulfation - - - 0.000000000000000004752 99.0
DYD3_k127_6673435_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 8.302e-231 723.0
DYD3_k127_6673435_1 SurA N-terminal domain K03771 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000001161 248.0
DYD3_k127_6673435_2 PPIC-type PPIASE domain K03770 - 5.2.1.8 0.000000000000000000000000000000000000000000009852 183.0
DYD3_k127_6675911_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 411.0
DYD3_k127_6675911_1 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 318.0
DYD3_k127_6675911_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006646 263.0
DYD3_k127_6675911_3 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000000002362 177.0
DYD3_k127_6681328_0 Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na( ) movement across the membrane K15987 - 3.6.1.1 2.679e-248 784.0
DYD3_k127_6681328_1 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001929 498.0
DYD3_k127_6681328_2 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.00000000000000000000000005832 110.0
DYD3_k127_6681328_3 23S rRNA-intervening sequence protein - - - 0.000000000000000000000107 104.0
DYD3_k127_6681328_4 glycosyl transferase family 8 - - - 0.0000000000000000000437 101.0
DYD3_k127_6682700_0 Glucose / Sorbosone dehydrogenase K21430 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001405 352.0
DYD3_k127_6682700_1 RecQ zinc-binding K03654 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 338.0
DYD3_k127_6682700_2 enoyl-CoA hydratase isomerase family K13766 - 4.2.1.18 0.000000000000000000000000000000000000000000000000002632 193.0
DYD3_k127_6682700_3 chitinase K01183 - 3.2.1.14 0.0000000000000000000008137 112.0
DYD3_k127_6682700_4 - - - - 0.00000000000000000001635 91.0
DYD3_k127_6682700_5 Peptidase family S58 K01266 - 3.4.11.19 0.0000000000000001451 88.0
DYD3_k127_6689182_0 nuclear chromosome segregation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006442 388.0
DYD3_k127_6689182_1 Domain of unknown function (DUF4159) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001267 271.0
DYD3_k127_6689182_2 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000003167 246.0
DYD3_k127_6689182_3 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division K20543 - - 0.0000000002115 70.0
DYD3_k127_6691894_0 TPM domain K06872 - - 0.0000000000000000000000004964 121.0
DYD3_k127_6691894_1 nucleotidyltransferase activity K00984,K19279 - 2.7.7.47 0.000000000000000422 91.0
DYD3_k127_6691894_2 PFAM DSBA oxidoreductase - - - 0.000001178 60.0
DYD3_k127_669523_0 Fibronectin type 3 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006135 326.0
DYD3_k127_669523_1 - - - - 0.0000006824 60.0
DYD3_k127_669523_2 PFAM UspA domain protein - - - 0.0005415 48.0
DYD3_k127_6708254_0 Protein tyrosine kinase - - - 0.000000000000007573 88.0
DYD3_k127_6708254_1 Tetratricopeptide repeat - - - 0.0003231 53.0
DYD3_k127_6709776_0 metallophosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 299.0
DYD3_k127_6709776_1 - - - - 0.000000000000000000000000001689 116.0
DYD3_k127_6715189_0 ACT domain K12524 - 1.1.1.3,2.7.2.4 1.731e-218 702.0
DYD3_k127_6741417_0 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004066 289.0
DYD3_k127_6741417_1 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.000000000000000000000000000000000000000000000000003057 185.0
DYD3_k127_6741417_2 Ham1 family K02428 - 3.6.1.66 0.00000000000000000000000001187 122.0
DYD3_k127_6746470_0 Tetratricopeptide repeat K08884,K12132 - 2.7.11.1 7.732e-280 888.0
DYD3_k127_6746470_1 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000287 545.0
DYD3_k127_6746470_2 GMC oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004246 356.0
DYD3_k127_6746470_3 ECF sigma factor - - - 0.0000000000000000000000000000000000000000000000000005509 192.0
DYD3_k127_6746470_4 - - - - 0.00000000000000000000000000000000000000000000000005612 203.0
DYD3_k127_6746470_5 DinB family - - - 0.0000000000000000000000000000002472 126.0
DYD3_k127_6758676_0 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K22110 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000087 305.0
DYD3_k127_6758676_1 PFAM glycosyl transferase group 1 K12995 - 2.4.1.348 0.00000000000000000000000000000000000000000000000000000009023 210.0
DYD3_k127_6758676_2 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000005738 163.0
DYD3_k127_6758676_3 PFAM UspA domain protein - - - 0.00000000000000000003978 98.0
DYD3_k127_6758676_4 Glucose / Sorbosone dehydrogenase - - - 0.0000000000002685 81.0
DYD3_k127_6763899_0 Metallopeptidase family M24 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003969 378.0
DYD3_k127_6763899_1 TonB-dependent Receptor Plug - - - 0.00000000000000000000000000000000008838 154.0
DYD3_k127_6763899_2 - - - - 0.000000000000000000000006463 110.0
DYD3_k127_6774288_0 - - - - 0.0000000000000000000002327 108.0
DYD3_k127_6784327_0 epimerase dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003231 475.0
DYD3_k127_6784327_1 3-beta hydroxysteroid dehydrogenase/isomerase family - - - 0.000000000000000000000000000000000000000008423 156.0
DYD3_k127_6791430_0 Sugar (and other) transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008771 359.0
DYD3_k127_6791430_1 Binding-protein-dependent transport system inner membrane component K02011 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003012 309.0
DYD3_k127_6791430_2 Peptidase family M3 K08602 - - 0.0000000000000000000000000001983 119.0
DYD3_k127_679234_0 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006804 301.0
DYD3_k127_679234_1 PFAM Extracellular ligand-binding receptor - - - 0.0000000008293 65.0
DYD3_k127_680601_0 tail specific protease K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001521 448.0
DYD3_k127_680601_1 Beta-lactamase enzyme family K17836 - 3.5.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005321 370.0
DYD3_k127_680601_2 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003399 314.0
DYD3_k127_680601_3 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003441 290.0
DYD3_k127_681382_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 9.124e-239 745.0
DYD3_k127_681382_1 DHH family K06881 - 3.1.13.3,3.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007828 312.0
DYD3_k127_6818928_0 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002801 442.0
DYD3_k127_6818928_1 Prolyl oligopeptidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005747 276.0
DYD3_k127_6818928_2 Aminotransferase class-V K04487 - 2.8.1.7 0.0000000000000000000000001731 109.0
DYD3_k127_6818928_3 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.00000000000000000000000117 109.0
DYD3_k127_6818928_4 4-amino-4-deoxy-L-arabinose transferase activity K14340 - - 0.00000000000001792 87.0
DYD3_k127_6835284_0 Multicopper oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 384.0
DYD3_k127_6835284_1 Pyridoxal-dependent decarboxylase conserved domain K01593 - 4.1.1.105,4.1.1.28 0.000000000000000000000000000000008746 130.0
DYD3_k127_6863658_0 Protein export membrane protein - - - 0.0 1418.0
DYD3_k127_6863658_1 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003731 331.0
DYD3_k127_6863658_2 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000006313 203.0
DYD3_k127_6863658_3 PFAM SMP-30 Gluconolaconase - - - 0.00000000000000000000000000000000000000000000000002259 198.0
DYD3_k127_6863658_4 Biotin-lipoyl like - - - 0.00000000000000000000000000000000000002232 156.0
DYD3_k127_6863658_5 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000001171 108.0
DYD3_k127_6863658_6 Protein of unknown function (DUF2892) - - - 0.00000000000000000000008162 99.0
DYD3_k127_6863658_7 SnoaL-like domain - - - 0.000000000000003527 89.0
DYD3_k127_6880989_0 tail specific protease K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002174 337.0
DYD3_k127_6880989_1 PFAM NADP oxidoreductase coenzyme F420-dependent - - - 0.00000000000000000000000000000000000000004873 162.0
DYD3_k127_6887296_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002753 607.0
DYD3_k127_6887296_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009849 426.0
DYD3_k127_6887296_2 Transcriptional - - - 0.0000000000000000000001517 99.0
DYD3_k127_6902934_0 PFAM Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000001696 231.0
DYD3_k127_6902934_1 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000001717 225.0
DYD3_k127_6902934_2 Histidine kinase K01768,K02660,K03406,K07315 - 3.1.3.3,4.6.1.1 0.0001917 53.0
DYD3_k127_6905596_0 Enoyl-CoA hydratase/isomerase K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002711 512.0
DYD3_k127_6912805_0 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003618 325.0
DYD3_k127_6912805_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004062 243.0
DYD3_k127_6912805_2 - - - - 0.00000000000000000000000000000001853 143.0
DYD3_k127_6912805_3 Tetratricopeptide repeat - - - 0.000000000000000000001097 111.0
DYD3_k127_6912805_4 protein transpeptidase domain K03587 - 3.4.16.4 0.00002069 54.0
DYD3_k127_6923249_0 - - - - 0.000000000000000000000000000000000000000000005906 175.0
DYD3_k127_6923249_3 - - - - 0.000004154 53.0
DYD3_k127_6926812_0 TonB dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007407 498.0
DYD3_k127_6926812_1 Part of the MsrPQ system that repairs oxidized cell envelope proteins containing methionine sulfoxide residues (Met- O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated cell envelope proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 446.0
DYD3_k127_6926812_2 Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005441 432.0
DYD3_k127_6926812_3 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain K17247 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010181,GO:0016020,GO:0016021,GO:0016491,GO:0016679,GO:0019538,GO:0020037,GO:0030091,GO:0031224,GO:0031226,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0046906,GO:0048037,GO:0050662,GO:0055114,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901564 - 0.000000000000000000000000000000000000000000000000000000006348 207.0
DYD3_k127_6926812_4 Copper resistance protein CopC K14166 - - 0.00000000004814 73.0
DYD3_k127_6926812_5 CopC domain K07156 - - 0.0000000003344 72.0
DYD3_k127_6926812_6 COG0330 Membrane protease subunits stomatin prohibitin homologs - - - 0.000000001275 69.0
DYD3_k127_6926812_7 Endonuclease/Exonuclease/phosphatase family - - - 0.00003125 52.0
DYD3_k127_6926812_8 - - - - 0.00009548 53.0
DYD3_k127_6940554_0 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002913 590.0
DYD3_k127_6940554_1 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004247 344.0
DYD3_k127_6940554_2 Zinc carboxypeptidase - - - 0.000000000000005375 83.0
DYD3_k127_6945725_0 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 400.0
DYD3_k127_6945725_1 Secretion protein K01993 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001293 330.0
DYD3_k127_6945725_2 Outer membrane efflux protein K12340 - - 0.00000000000000000000003443 113.0
DYD3_k127_696102_0 TonB-dependent Receptor Plug - - - 0.0000000000000000000000000000000000000000000000000000000003464 232.0
DYD3_k127_696102_1 cytochrome c oxidase K02351,K02862 - - 0.00000000000000000000000000000000000000000000257 173.0
DYD3_k127_696102_2 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000000000000000000000171 162.0
DYD3_k127_7018861_0 LVIVD repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 476.0
DYD3_k127_7018861_1 metal-dependent phosphohydrolase, HD sub domain K03698 - - 0.0000000000000000000000000000000000000000000000000000000000000000002321 248.0
DYD3_k127_7018861_2 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000001803 229.0
DYD3_k127_7018861_3 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000000000000000000000000000000000000000000000000004066 216.0
DYD3_k127_7018861_4 LemA family K03744 - - 0.000000000000000000000000000000000000000000000000002109 199.0
DYD3_k127_7018861_5 Belongs to the peptidase M48B family K03799 - - 0.0000000000000000000000000000000000000000000004645 179.0
DYD3_k127_7018861_6 MerR HTH family regulatory protein - - - 0.000000000000000000000000000000003495 139.0
DYD3_k127_7018861_7 response regulator - - - 0.0000002116 62.0
DYD3_k127_7018861_9 Type II transport protein GspH K08084 - - 0.000801 49.0
DYD3_k127_7023616_0 ABC transporter transmembrane region - - - 6.419e-211 671.0
DYD3_k127_7023616_1 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002926 453.0
DYD3_k127_7023616_2 PFAM amino acid permease-associated region K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002026 417.0
DYD3_k127_7023616_3 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009485 352.0
DYD3_k127_7026939_0 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002959 466.0
DYD3_k127_7026939_1 Berberine and berberine like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004602 424.0
DYD3_k127_7026939_2 Methyltransferase - - - 0.00000000000000000000000000000000000000000000001437 181.0
DYD3_k127_7034719_0 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002194 572.0
DYD3_k127_7034719_1 OPT oligopeptide transporter protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006718 487.0
DYD3_k127_7034719_2 Asparaginase K13051 - 3.4.19.5 0.000000000000000000000000000000000000000000000000009019 200.0
DYD3_k127_7040408_0 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000001083 265.0
DYD3_k127_7040408_1 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.0000000000000000000000000000000000000000000000000000000000002285 220.0
DYD3_k127_7040408_2 RNA 2'-O ribose methyltransferase substrate binding K03437 - - 0.00000000000000000000000000000000000000000000000000000003543 205.0
DYD3_k127_7050965_0 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000438 204.0
DYD3_k127_7050965_1 - - - - 0.000000000000000000000000000000000000000000000005821 177.0
DYD3_k127_7050965_2 Protein of unknown function (DUF502) - - - 0.00000000000000005285 85.0
DYD3_k127_7073435_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 612.0
DYD3_k127_7073435_1 Pyrimidine nucleoside phosphorylase C-terminal domain K00756 - 2.4.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001489 571.0
DYD3_k127_7073435_2 Protein kinase domain K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000008533 241.0
DYD3_k127_7073435_3 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000007597 211.0
DYD3_k127_7073435_4 Phosphoribosyl transferase domain K07101 - - 0.000000000000000000000000000000000000000000002636 170.0
DYD3_k127_7073435_5 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000259 159.0
DYD3_k127_7073435_6 sensor histidine kinase response - - - 0.000000000000000000000009701 115.0
DYD3_k127_7073435_7 4-vinyl reductase, 4VR - - - 0.0000000000000009455 85.0
DYD3_k127_709860_0 protein related to plant photosystem II stability assembly factor - - - 0.000000000000000000000000000000000000000000000000000000000000000000005175 258.0
DYD3_k127_709860_1 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000001021 130.0
DYD3_k127_709860_2 Belongs to the HesB IscA family K13628 - - 0.00000000000000000000005125 102.0
DYD3_k127_7100229_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 9.711e-264 818.0
DYD3_k127_7100229_1 Penicillin amidase K07116 - 3.5.1.97 0.00000000000000000000000000000000000000000000000000000000000000000000000001293 259.0
DYD3_k127_7100229_2 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00001992 49.0
DYD3_k127_7118532_0 Cellulose biosynthesis protein BcsQ K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007874 355.0
DYD3_k127_7118532_1 ABC transporter substrate-binding protein PnrA-like K07335 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000356 286.0
DYD3_k127_7118532_2 ParB-like nuclease domain K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001578 265.0
DYD3_k127_7118532_3 Peptidase, M23 - - - 0.00000000000000000001288 107.0
DYD3_k127_7118532_4 NIF3 (NGG1p interacting factor 3) - - - 0.000000000000001286 81.0
DYD3_k127_7118532_5 Polymer-forming cytoskeletal - - - 0.000000002664 70.0
DYD3_k127_7134377_0 nitrous-oxide reductase activity K00376,K02275 GO:0000041,GO:0005575,GO:0005623,GO:0006810,GO:0006811,GO:0006812,GO:0006825,GO:0008150,GO:0015677,GO:0030001,GO:0042597,GO:0044464,GO:0051179,GO:0051234 1.7.2.4,1.9.3.1 8.196e-302 944.0
DYD3_k127_7134377_1 Nitronate monooxygenase K00459 - 1.13.12.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000232 442.0
DYD3_k127_7134377_10 NosL K19342 - - 0.0000000000000006155 92.0
DYD3_k127_7134377_11 Radical SAM ThiC family K03147 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0007584,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009605,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010266,GO:0014070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017144,GO:0018130,GO:0019144,GO:0019438,GO:0019904,GO:0031667,GO:0033273,GO:0034641,GO:0042221,GO:0042364,GO:0042493,GO:0042723,GO:0042724,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0048037,GO:0050896,GO:0051536,GO:0051540,GO:0071704,GO:0072527,GO:0072528,GO:0080041,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901698 4.1.99.17 0.000000000000004312 79.0
DYD3_k127_7134377_2 alginic acid biosynthetic process K07218 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003818 408.0
DYD3_k127_7134377_3 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000000000000000001072 250.0
DYD3_k127_7134377_4 AAA domain, putative AbiEii toxin, Type IV TA system K01990,K19340 - - 0.0000000000000000000000000000000000000000000000000000000000006303 237.0
DYD3_k127_7134377_5 ABC-2 family transporter protein K19341 - - 0.0000000000000000000000000000000000000000000000000000000005662 221.0
DYD3_k127_7134377_6 lipoprotein involved in nitrous oxide reduction - - - 0.000000000000000000000000000000000000000000000000000000007434 207.0
DYD3_k127_7134377_7 Domain of unknown function (DUF4442) - - - 0.00000000000000000000000000000000000000006724 157.0
DYD3_k127_7134377_8 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000000002942 132.0
DYD3_k127_7134377_9 - - - - 0.00000000000000000003995 104.0
DYD3_k127_717673_0 Nucleotidyl transferase K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003089 400.0
DYD3_k127_717673_1 Bacterial protein of unknown function (DUF885) - - - 0.0000000000000000000000000000000000000000000000000000000000000001153 250.0
DYD3_k127_717673_2 PFAM Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000084 164.0
DYD3_k127_717673_3 Sugar (and other) transporter - - - 0.0000001226 63.0
DYD3_k127_7190959_0 Ppx/GppA phosphatase family K01524 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006793,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0040007,GO:0044237,GO:0044464,GO:0071944 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000000562 220.0
DYD3_k127_7190959_1 Histidine kinase - - - 0.00000000000738 72.0
DYD3_k127_7190959_2 proline racemase K01777 - 5.1.1.4 0.000008774 50.0
DYD3_k127_736777_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005393 381.0
DYD3_k127_736777_1 AcrB/AcrD/AcrF family K03296 - - 0.00000000000000000000000000000000000000000000000000000000001439 208.0
DYD3_k127_736777_2 NHL repeat - - - 0.000000000009173 77.0
DYD3_k127_740546_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 385.0
DYD3_k127_740546_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000003735 149.0
DYD3_k127_740546_2 Protein of unknown function (DUF983) - - - 0.0000000000000000000000000000007505 125.0
DYD3_k127_740546_3 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.000000000000000000000003667 103.0
DYD3_k127_740546_4 PDZ domain - - - 0.0000000000000000003347 102.0
DYD3_k127_740546_6 - - - - 0.0000004895 55.0
DYD3_k127_74479_0 Glucose inhibited division protein A K21401 - 1.3.99.38 0.000000000000000000000000000000000000000001191 171.0
DYD3_k127_74479_1 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000002129 154.0
DYD3_k127_74479_2 Integral membrane protein DUF92 - GO:0005575,GO:0016020 - 0.000000000000000000000000000000000001824 148.0
DYD3_k127_74479_3 AntiSigma factor - GO:0000988,GO:0000989,GO:0003674,GO:0005488,GO:0006950,GO:0006979,GO:0008150,GO:0008270,GO:0009266,GO:0009408,GO:0009593,GO:0009628,GO:0009889,GO:0010556,GO:0016989,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0032502,GO:0042221,GO:0043167,GO:0043169,GO:0043934,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051606,GO:0051775,GO:0051776,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2001141 - 0.0001565 53.0
DYD3_k127_771183_0 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005863 541.0
DYD3_k127_771183_1 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003123 486.0
DYD3_k127_771183_10 Cell division protein FtsQ K03589 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0040007,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0071944 - 0.00001764 55.0
DYD3_k127_771183_2 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002692 422.0
DYD3_k127_771183_3 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003293 424.0
DYD3_k127_771183_4 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009113 425.0
DYD3_k127_771183_5 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002862 389.0
DYD3_k127_771183_6 Penicillin binding protein transpeptidase domain K03587 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002927 374.0
DYD3_k127_771183_7 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001608 342.0
DYD3_k127_771183_8 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004657 314.0
DYD3_k127_771183_9 Cell cycle protein K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000005004 250.0
DYD3_k127_805268_0 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001888 340.0
DYD3_k127_805268_1 CAAX protease self-immunity K07052 - - 0.00000000000000000000000000000000000000000000000002359 188.0
DYD3_k127_805268_2 PFAM DSBA oxidoreductase - - - 0.0000000000000000000000000000000000003157 148.0
DYD3_k127_848006_0 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003195 429.0
DYD3_k127_848006_1 Deacetylases, including yeast histone deacetylase and acetoin utilization protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006051 435.0
DYD3_k127_848006_2 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K00857,K01920,K01935 GO:0003674,GO:0003824,GO:0004141,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0017144,GO:0018130,GO:0019752,GO:0032787,GO:0034641,GO:0042364,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.21,6.3.2.3,6.3.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 330.0
DYD3_k127_848006_3 PFAM Aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008743 308.0
DYD3_k127_848006_4 Belongs to the ATCase OTCase family K09065 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0043857,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002154 310.0
DYD3_k127_848006_5 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.000000000000000000000000000000000000000000000000000000000000000000001674 249.0
DYD3_k127_848006_6 Peptidase dimerisation domain K01438 - 3.5.1.16 0.000000000000000000000000000000000000000000000000000000000000004673 230.0
DYD3_k127_848006_7 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.000000000000000000000000000000000000000000000000000000002185 225.0
DYD3_k127_848006_8 Amino acid permease K03294 - - 0.0000000000000000000000000000000000239 140.0
DYD3_k127_851409_0 phosphorelay signal transduction system K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 398.0
DYD3_k127_851409_1 Domain of unknown function (DUF4403) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001001 266.0
DYD3_k127_851409_2 Bacterial extracellular solute-binding proteins, family 5 Middle K02035,K13893 - - 0.000000000000000000005729 104.0
DYD3_k127_851409_5 Protein tyrosine kinase K12132 - 2.7.11.1 0.0000002039 63.0
DYD3_k127_880021_0 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 340.0
DYD3_k127_880021_1 ATP-grasp - - - 0.000000000000000000000000000000000000000000000000000000000000000004415 235.0
DYD3_k127_880021_2 polysaccharide biosynthetic process - - - 0.000000000000000000000000000000000000000000000000000000000000005485 236.0
DYD3_k127_880021_3 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000000000000002132 186.0
DYD3_k127_880021_4 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000644 185.0
DYD3_k127_880021_5 ATP-grasp - - - 0.000000000000000000000000000955 131.0
DYD3_k127_893123_0 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000002384 257.0
DYD3_k127_893123_1 Lanthionine synthetase C family protein - - - 0.0000000000000000000000000000000003711 144.0
DYD3_k127_893123_2 Immunoglobulin-like domain of bacterial spore germination - - - 0.00000000000000000000001074 118.0
DYD3_k127_893123_3 - - - - 0.00000000000000000000007634 107.0
DYD3_k127_893123_4 Protein of unknown function (DUF1624) - - - 0.0000000000002427 71.0
DYD3_k127_901245_0 Sodium:solute symporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 426.0
DYD3_k127_901245_1 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002952 315.0
DYD3_k127_901245_2 Iron-sulphur cluster biosynthesis - - - 0.000000000000000000000000000000000004308 156.0
DYD3_k127_911669_0 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 613.0
DYD3_k127_911669_1 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000001055 189.0
DYD3_k127_911669_2 - - - - 0.000000000000000000000000000196 132.0
DYD3_k127_919340_0 Elongation factor G C-terminus K06207 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000411 304.0
DYD3_k127_919340_1 Cation efflux family K16264 - - 0.0000000000000000000000000000000000000000000000000000000000000001619 229.0
DYD3_k127_924945_0 Rhodanese Homology Domain K01069 - 3.1.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003761 524.0
DYD3_k127_927296_0 Belongs to the sulfur carrier protein TusA family K07112 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002552 359.0
DYD3_k127_927296_1 Protein of unknown function (DUF3105) - - - 0.0000000000000000000000000000000000000000000000001839 183.0
DYD3_k127_941292_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1125.0
DYD3_k127_941587_0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 - 1.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001615 593.0
DYD3_k127_941587_1 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001802 306.0
DYD3_k127_941587_2 Outer membrane protein beta-barrel domain - - - 0.000000000000000000016 106.0
DYD3_k127_961537_0 Domain of unknown function (DUF4153) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009414 252.0
DYD3_k127_961537_1 Amidohydrolase family - - - 0.00000003471 63.0
DYD3_k127_994702_0 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K02564 - 3.5.99.6 1.445e-278 868.0
DYD3_k127_994702_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002483 617.0
DYD3_k127_994702_2 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000002045 262.0
DYD3_k127_994702_3 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000001332 126.0
DYD3_k127_994702_4 HEAT repeat - - - 0.000001371 60.0
DYD3_k127_996235_0 Biotin carboxylase C-terminal domain K01941,K01961 - 6.3.4.14,6.3.4.6,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 475.0