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Overview

ID MAG01851
Name HKD3_bin.35
Sample SMP0048
Taxonomy
Kingdom Bacteria
Phylum Desulfobacterota
Class SM23-61
Order SM23-61
Family
Genus
Species
Assembly information
Completeness (%) 89.12
Contamination (%) 6.15
GC content (%) 57.0
N50 (bp) 7,285
Genome size (bp) 3,410,463

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes3224

Gene name Description KEGG GOs EC E-value Score Sequence
HKD3_k127_10024_0 Beta-lactamase superfamily domain K03476 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 405.0
HKD3_k127_10024_1 2-nitropropane dioxygenase K02371 - 1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006067 286.0
HKD3_k127_10024_2 Uncharacterised ArCR, COG2043 - - - 0.000000000000000000000000000000000000000000000000000001014 203.0
HKD3_k127_10024_3 YsiA-like protein, C-terminal region - - - 0.000000000000000000000000000000000001321 146.0
HKD3_k127_10024_4 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.0000000000000000000000001035 106.0
HKD3_k127_1008241_0 COG1593 TRAP-type C4-dicarboxylate transport system, large permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000168 557.0
HKD3_k127_1008241_1 NADH flavin oxidoreductase NADH oxidase K00219 - 1.3.1.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 458.0
HKD3_k127_1008241_2 Belongs to the D-glutamate cyclase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004336 353.0
HKD3_k127_1008241_3 Protein of unknown function (DUF3300) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 357.0
HKD3_k127_1008241_4 Bacterial extracellular solute-binding protein, family 7 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001725 319.0
HKD3_k127_1008241_5 Protein of unknown function (DUF2950) - - - 0.000000000000000000000000000000000000000000000000000000000436 209.0
HKD3_k127_1008241_6 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000000000000000000000000000000000000000000001103 201.0
HKD3_k127_1010565_0 Belongs to the SfsA family K06206 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002371 368.0
HKD3_k127_1010565_1 cobalt ion transport K02007 GO:0000041,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015675,GO:0016020,GO:0016021,GO:0030001,GO:0031224,GO:0032991,GO:0043190,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001336 271.0
HKD3_k127_1010565_2 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity K01607 - 4.1.1.44 0.0000000000000000000000000000000000000000000000000008142 185.0
HKD3_k127_1010565_3 cobalt ion transport K02009 - - 0.0000000000000000000000001234 110.0
HKD3_k127_1010565_4 Putative MetA-pathway of phenol degradation - - - 0.000001887 55.0
HKD3_k127_1010565_5 Putative MetA-pathway of phenol degradation - - - 0.00002366 50.0
HKD3_k127_1010810_0 Tripartite tricarboxylate transporter TctA family K07793 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 379.0
HKD3_k127_1019067_0 Belongs to the Nudix hydrolase family. NudC subfamily K03426 - 3.6.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 335.0
HKD3_k127_1019067_1 MFS_1 like family K08161 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004724 316.0
HKD3_k127_1019067_2 - - - - 0.000000000000000000000000000000000001727 143.0
HKD3_k127_1100477_0 Thiolase, C-terminal domain K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002013 349.0
HKD3_k127_1100477_1 Involved in DNA repair and RecF pathway recombination K03584 - - 0.0000000000000000000000000000000000000000005155 166.0
HKD3_k127_1100477_2 Domain of unknown function (DUF4115) - - - 0.00000000000000001404 94.0
HKD3_k127_118336_0 PFAM FAD linked oxidase domain protein K00104 - 1.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 474.0
HKD3_k127_118336_1 Fe-S oxidoreductase K11473 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000225 315.0
HKD3_k127_118336_2 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000001549 127.0
HKD3_k127_1190497_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 2.535e-258 809.0
HKD3_k127_1190497_1 PFAM Bacterial extracellular solute-binding proteins, family 5 Middle K02035,K13893 - - 1.742e-228 719.0
HKD3_k127_1190497_10 Belongs to the HpcH HpaI aldolase family K02510 - 4.1.2.52 0.000000000000000000000000004375 121.0
HKD3_k127_1190497_11 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.00000000000000000005235 92.0
HKD3_k127_1190497_2 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 - 2.9.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 486.0
HKD3_k127_1190497_3 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005768 435.0
HKD3_k127_1190497_4 Polyprenyl synthetase K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002083 342.0
HKD3_k127_1190497_5 alcohol dehydrogenase K13954 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000003726 270.0
HKD3_k127_1190497_6 HNH endonuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007872 250.0
HKD3_k127_1190497_7 lipid kinase, YegS Rv2252 BmrU family - - - 0.00000000000000000000000000000000000000000000000000332 195.0
HKD3_k127_1190497_8 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.00000000000000000000000000000000000000000001956 171.0
HKD3_k127_1190497_9 DNA polymerase K02347 - - 0.000000000000000000000000000000000000000002909 160.0
HKD3_k127_1192765_0 NADPH-dependent FMN reductase - - - 0.00000000000000000000000000000000000000000000000000000000000009263 219.0
HKD3_k127_1192765_1 Alpha/beta hydrolase family K06889,K07397 - - 0.0000000000000000000000000000000000000000000000000000005482 205.0
HKD3_k127_1192765_2 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 0.000000000000000000000000000002049 127.0
HKD3_k127_1214308_0 Belongs to the RtcB family K14415 - 6.5.1.3 5.682e-206 653.0
HKD3_k127_1214308_1 TIGRFAM penicillin-binding protein, 1A family K05366 - 2.4.1.129,3.4.16.4 1.388e-195 631.0
HKD3_k127_1214308_10 Phosphodiester glycosidase - - - 0.000000000000000000000000000000004909 138.0
HKD3_k127_1214308_11 PFAM Archease protein family (DUF101 UPF0211) - - - 0.0000000000000000000000000000003258 127.0
HKD3_k127_1214308_12 PFAM amino acid-binding ACT domain protein K03567 - - 0.00000000000000000000000000003805 126.0
HKD3_k127_1214308_13 PFAM RNP-1 like RNA-binding protein - - - 0.000000000000000000000001819 106.0
HKD3_k127_1214308_2 UPF0210 protein K09157 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001994 610.0
HKD3_k127_1214308_3 spermidine synthase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007356 512.0
HKD3_k127_1214308_4 Peptidase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007281 388.0
HKD3_k127_1214308_5 2-dehydro-3-deoxyphosphogluconate aldolase 4-hydroxy-2-oxoglutarate aldolase K01625 - 4.1.2.14,4.1.3.42 0.000000000000000000000000000000000000000000000000000000000000000000000002133 250.0
HKD3_k127_1214308_6 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000006189 235.0
HKD3_k127_1214308_7 pfkB family carbohydrate kinase K00874 - 2.7.1.45 0.0000000000000000000000000000000000000000000000000000000000000006685 226.0
HKD3_k127_1214308_8 TIGRFAM acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase K01439 - 3.5.1.18 0.000000000000000000000000000000000000000000000000000000000000004357 231.0
HKD3_k127_1214308_9 DnaJ molecular chaperone homology domain K05516 - - 0.000000000000000000000000000000000000000000003438 171.0
HKD3_k127_1215990_0 Beta-lactamase - - - 3.866e-258 818.0
HKD3_k127_1215990_1 ABC-type Fe3 transport system permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005605 611.0
HKD3_k127_1215990_10 Branched-chain amino acid ATP-binding cassette transporter K01995,K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006208 320.0
HKD3_k127_1215990_11 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001396 271.0
HKD3_k127_1215990_12 PFAM Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002921 257.0
HKD3_k127_1215990_13 ABC-type branched-chain amino acid transport systems ATPase component K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005764 254.0
HKD3_k127_1215990_14 Branched-chain amino acid transport system / permease component K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000785 253.0
HKD3_k127_1215990_15 Membrane transport protein K07088 - - 0.00000000000000000000000000000000000000000000000000000000000002867 225.0
HKD3_k127_1215990_16 DsbA oxidoreductase - - - 0.00000000000000000000000000000000000000000000000005688 183.0
HKD3_k127_1215990_17 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) - - - 0.000000000000000000000000000000003716 138.0
HKD3_k127_1215990_18 Permeases of the major facilitator superfamily K08153 - - 0.0000000003812 72.0
HKD3_k127_1215990_19 Tetratricopeptide repeat protein - - - 0.0001761 52.0
HKD3_k127_1215990_2 Putative glycosyl hydrolase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000882 464.0
HKD3_k127_1215990_3 pfam php K02347 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 437.0
HKD3_k127_1215990_4 lyase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000313 428.0
HKD3_k127_1215990_5 Possible lysine decarboxylase K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008072 400.0
HKD3_k127_1215990_6 cyclic diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005454 394.0
HKD3_k127_1215990_7 Bacterial extracellular solute-binding protein K02012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 362.0
HKD3_k127_1215990_8 PFAM EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 353.0
HKD3_k127_1215990_9 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K11072 - 3.6.3.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005186 352.0
HKD3_k127_1218418_0 Psort location CytoplasmicMembrane, score K07793 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 598.0
HKD3_k127_1218418_1 oxidoreductase beta subunit K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 297.0
HKD3_k127_1218418_2 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002222 259.0
HKD3_k127_1218418_3 Belongs to the PdxA family K00097,K22024 - 1.1.1.262,1.1.1.408,1.1.1.409 0.00000000000000000000000000000000000000000000419 171.0
HKD3_k127_1218418_4 PFAM Pyruvate K00177 - 1.2.7.3 0.00000000000000000000000000000000000000004376 159.0
HKD3_k127_1218418_5 PFAM pyruvate flavodoxin ferredoxin oxidoreductase domain protein K00174 - 1.2.7.11,1.2.7.3 0.0000000000000000000000002814 107.0
HKD3_k127_1218418_6 binding domain protein K00176 - 1.2.7.3 0.00000000000001066 76.0
HKD3_k127_1218418_7 membrane K07794 - - 0.0000000001172 68.0
HKD3_k127_1221227_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 445.0
HKD3_k127_1221227_1 PFAM Thiamine pyrophosphate K00170,K00187 - 1.2.7.1,1.2.7.7 0.00000000000000000000000000000000000000000000000000000000000001526 220.0
HKD3_k127_1221227_2 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.0000000000000000000000000000000000000000000000001776 191.0
HKD3_k127_1221227_3 PFAM D-galactarate dehydratase Altronate hydrolase, C terminus K16850 - 4.2.1.7 0.0000000000000000000000000000009682 126.0
HKD3_k127_1221227_4 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000000000004853 102.0
HKD3_k127_1221227_5 SAF K16849 - 4.2.1.7 0.000000000000000000003314 96.0
HKD3_k127_1228603_0 TIGRFAM oligopeptide dipeptide ABC transporter, ATPase subunit K02032,K10823 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007537 361.0
HKD3_k127_1228603_1 Belongs to the ABC transporter superfamily K02031,K15583 - - 0.00000000000001114 75.0
HKD3_k127_1228928_0 PFAM TRAP C4-dicarboxylate transport system permease DctM subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002787 569.0
HKD3_k127_1228928_1 transporter solute receptor, DctP family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008186 460.0
HKD3_k127_1228928_2 Belongs to the PdxA family K00097,K22024 - 1.1.1.262,1.1.1.408,1.1.1.409 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002707 401.0
HKD3_k127_1228928_3 Putative nucleotide-binding of sugar-metabolising enzyme K22129 - 2.7.1.219,2.7.1.220 0.000000000000000000000000000000000000000000000000000000001117 216.0
HKD3_k127_1228928_4 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.000000000000000000000000000000000000000000000000944 179.0
HKD3_k127_1228928_5 PFAM Tripartite ATP-independent periplasmic transporter DctQ component - - - 0.000000000000000000000000000000000000001345 153.0
HKD3_k127_1228928_6 Bacterial extracellular solute-binding protein K02027 - - 0.000000000000000000000000000000000000001588 153.0
HKD3_k127_1228928_7 PFAM Integrase catalytic region K07497 - - 0.0003512 47.0
HKD3_k127_1246809_0 PFAM CMP dCMP deaminase zinc-binding K01493 - 3.5.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000005021 244.0
HKD3_k127_1246809_1 Ribose 5-phosphate isomerase K01808 - 5.3.1.6 0.000000000000000000000000000000000000000000000001073 178.0
HKD3_k127_1246809_2 TPR repeat - - - 0.0000000000000000000000000000000000000000000002661 180.0
HKD3_k127_1246809_3 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000006022 164.0
HKD3_k127_125114_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 3.277e-207 652.0
HKD3_k127_125114_1 Vacuole effluxer Atg22 like K06902 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007863 381.0
HKD3_k127_125114_2 Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 364.0
HKD3_k127_125114_3 FKBP-type peptidyl-prolyl cis-trans isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005048 281.0
HKD3_k127_125114_4 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001077 269.0
HKD3_k127_125114_5 Belongs to the UPF0173 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006052 255.0
HKD3_k127_125266_0 PFAM 4-hydroxyphenylacetate 3-hydroxylase K14534 - 4.2.1.120,5.3.3.3 3.087e-239 747.0
HKD3_k127_125266_1 NADH:flavin oxidoreductase / NADH oxidase family K00219 - 1.3.1.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 562.0
HKD3_k127_125266_10 Belongs to the enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000496 332.0
HKD3_k127_125266_11 Binding-protein-dependent transport system inner membrane component K02026 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 333.0
HKD3_k127_125266_12 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000008915 244.0
HKD3_k127_125266_13 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020,K19647 - 1.1.1.291,1.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000004894 239.0
HKD3_k127_125266_14 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000002368 221.0
HKD3_k127_125266_15 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000001861 212.0
HKD3_k127_125266_16 TRAP-type C4-dicarboxylate transport system small permease component - - - 0.00000000000000000000000000000000000000000006741 168.0
HKD3_k127_125266_17 Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.000000000000000000000000000000000000113 154.0
HKD3_k127_125266_18 PFAM Pyruvate K00177 - 1.2.7.3 0.000000000000000000000000000000000002282 153.0
HKD3_k127_125266_19 FCD - - - 0.000000000000000000000000000000008958 136.0
HKD3_k127_125266_2 Tripartite tricarboxylate transporter TctA family K07793 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 553.0
HKD3_k127_125266_20 4 iron, 4 sulfur cluster binding K00176,K05524 - 1.2.7.3 0.00000000000000000000002995 101.0
HKD3_k127_125266_21 Pyridoxamine 5'-phosphate oxidase K07006 - - 0.000000000000000001256 92.0
HKD3_k127_125266_23 Tripartite tricarboxylate transporter TctB family - - - 0.00000000002335 70.0
HKD3_k127_125266_3 COG1593 TRAP-type C4-dicarboxylate transport system, large permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007819 540.0
HKD3_k127_125266_4 PFAM pyruvate flavodoxin ferredoxin oxidoreductase domain protein K00174 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 496.0
HKD3_k127_125266_5 Bacterial extracellular solute-binding protein K02027 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009978 484.0
HKD3_k127_125266_6 Bacterial extracellular solute-binding protein, family 7 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002272 439.0
HKD3_k127_125266_7 PFAM Thiamine pyrophosphate K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003926 383.0
HKD3_k127_125266_8 ATPase associated with various cellular activities, AAA_3 K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 381.0
HKD3_k127_125266_9 Binding-protein-dependent transport system inner membrane component K02025 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 357.0
HKD3_k127_1253944_0 Glycosyltransferase family 20 K00697,K13057,K20436 - 2.4.1.15,2.4.1.245,2.4.1.347,2.5.1.135 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822 605.0
HKD3_k127_1253944_1 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 509.0
HKD3_k127_1253944_2 Radical SAM superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003387 444.0
HKD3_k127_1253944_3 pfkB family carbohydrate kinase K00874 - 2.7.1.45 0.0000000000000000000000000000000000000000002084 161.0
HKD3_k127_1253944_4 protein transport K03118 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009314,GO:0009628,GO:0009977,GO:0015031,GO:0015291,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0032991,GO:0033036,GO:0033281,GO:0034613,GO:0042802,GO:0042886,GO:0042887,GO:0043953,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046907,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098796,GO:0098797,GO:1904680 - 0.0000000000000000000000000000000000000000002759 167.0
HKD3_k127_1253944_5 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000007799 134.0
HKD3_k127_1256722_0 4Fe-4S binding domain K02572 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 512.0
HKD3_k127_1256722_1 Domain of unknown function (DUF362) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007848 315.0
HKD3_k127_1256722_2 TIGRFAM Ammonium transporter K03320 - - 0.00000000000000000000000000000000000000000000000000000000000000001069 235.0
HKD3_k127_1256722_3 ANTAR - - - 0.00000000000000000000000000000000000000000000000000000000000000005909 235.0
HKD3_k127_1256722_4 Domain present in phytochromes and cGMP-specific phosphodiesterases. K02584 - - 0.000000004314 67.0
HKD3_k127_1256722_5 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07712 - - 0.0001465 53.0
HKD3_k127_1264620_0 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001982 584.0
HKD3_k127_1264620_1 Pfam Coenzyme A transferase K01039 - 2.8.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000002647 270.0
HKD3_k127_1264620_2 D-galactarate dehydratase / Altronate hydrolase, C terminus K16850 - 4.2.1.7 0.000000000000000008595 85.0
HKD3_k127_1276177_0 thiolester hydrolase activity K06889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002945 264.0
HKD3_k127_1276177_1 sequence-specific DNA binding K00567,K13529,K15051 - 2.1.1.63,3.2.2.21 0.000000000000000000000000000000000000000000000000000000000000000000003992 247.0
HKD3_k127_1276177_2 Belongs to the enoyl-CoA hydratase isomerase family K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000001737 228.0
HKD3_k127_1276177_3 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000000000000000007908 166.0
HKD3_k127_1276177_5 translation initiation factor activity K03699 - - 0.00004516 48.0
HKD3_k127_1301092_0 PFAM aminotransferase class-III K00821 GO:0003674,GO:0005488,GO:0005515,GO:0008144,GO:0019842,GO:0030170,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363 2.6.1.11,2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002029 508.0
HKD3_k127_1301092_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K08357 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001988 484.0
HKD3_k127_1301092_2 ubiE/COQ5 methyltransferase family K00574,K07755 - 2.1.1.137,2.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005737 336.0
HKD3_k127_1301092_3 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002428 318.0
HKD3_k127_1301092_4 - - - - 0.00000000000000000000000000000000000000000000104 170.0
HKD3_k127_1301092_5 SpoVT / AbrB like domain - - - 0.0000000000000000000000000001493 117.0
HKD3_k127_1301092_6 PFAM Thioredoxin K03671 - - 0.00000000000000000000004511 109.0
HKD3_k127_1305517_0 4fe-4S ferredoxin, iron-sulfur binding domain protein K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 592.0
HKD3_k127_1305517_1 Heterodisulfide reductase, subunit B K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006823 317.0
HKD3_k127_1305517_2 4Fe-4S ferredoxin iron-sulfur binding domain protein K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000000000000000000000000003673 251.0
HKD3_k127_1305517_3 4Fe-4S dicluster domain K03389,K03390,K16887,K18930 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000006306 211.0
HKD3_k127_1305517_4 Immunoglobulin K06465 GO:0002253,GO:0002376,GO:0002429,GO:0002673,GO:0002682,GO:0002684,GO:0002697,GO:0002757,GO:0002764,GO:0002768,GO:0002920,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0006873,GO:0006874,GO:0006875,GO:0006950,GO:0006952,GO:0006968,GO:0007154,GO:0007165,GO:0007166,GO:0007204,GO:0008150,GO:0008152,GO:0009897,GO:0009966,GO:0009967,GO:0009986,GO:0009987,GO:0010468,GO:0010522,GO:0010524,GO:0010646,GO:0010647,GO:0010959,GO:0016020,GO:0016021,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019222,GO:0019637,GO:0019725,GO:0023051,GO:0023052,GO:0023056,GO:0030003,GO:0030162,GO:0030258,GO:0030449,GO:0031224,GO:0031226,GO:0031347,GO:0032101,GO:0032879,GO:0032991,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035004,GO:0042592,GO:0043269,GO:0043270,GO:0044237,GO:0044238,GO:0044255,GO:0044425,GO:0044459,GO:0044464,GO:0046486,GO:0046488,GO:0046834,GO:0046854,GO:0046934,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048878,GO:0050727,GO:0050776,GO:0050778,GO:0050789,GO:0050794,GO:0050801,GO:0050851,GO:0050853,GO:0050896,GO:0051049,GO:0051050,GO:0051171,GO:0051246,GO:0051279,GO:0051281,GO:0051282,GO:0051480,GO:0051716,GO:0051896,GO:0051897,GO:0051924,GO:0051928,GO:0052813,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0060255,GO:0060341,GO:0065007,GO:0065008,GO:0070613,GO:0071704,GO:0071944,GO:0072503,GO:0072507,GO:0080090,GO:0080134,GO:0098552,GO:0098771,GO:1902531,GO:1902533,GO:1903169,GO:1903317,GO:1904062,GO:1904064,GO:1904427,GO:2000257 - 0.0004308 46.0
HKD3_k127_1306275_0 Phosphohydrolase-associated domain K01129 - 3.1.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001695 434.0
HKD3_k127_1306275_1 Permease YjgP YjgQ family K11720 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001247 284.0
HKD3_k127_1306275_2 PFAM permease YjgP YjgQ family protein K07091 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007472 278.0
HKD3_k127_1306275_3 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 0.000000000000001444 77.0
HKD3_k127_1306831_0 Histidine kinase HAMP K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002949 461.0
HKD3_k127_1306831_1 TIGRFAM Sua5 YciO YrdC YwlC family protein K07566 - 2.7.7.87 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002873 284.0
HKD3_k127_1306831_2 php family - - - 0.000000000001382 75.0
HKD3_k127_1318631_0 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006283 482.0
HKD3_k127_1318631_1 NfeD-like C-terminal, partner-binding K07403 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003389 443.0
HKD3_k127_1318631_10 translation release factor activity K03265 - - 0.00000000000002276 79.0
HKD3_k127_1318631_2 COGs COG0767 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008388 384.0
HKD3_k127_1318631_3 PFAM Band 7 protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003896 344.0
HKD3_k127_1318631_4 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000274 333.0
HKD3_k127_1318631_5 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004332 300.0
HKD3_k127_1318631_6 MFS_1 like family K08161 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005082 301.0
HKD3_k127_1318631_7 Mammalian cell entry related domain protein K02067,K06192 - - 0.00000000000000000000000000000000000000000000000000000000000002541 229.0
HKD3_k127_1318631_8 ABC-type transport auxiliary lipoprotein component K18480 - - 0.000000000000000000000000000000002099 140.0
HKD3_k127_1318631_9 haloacid dehalogenase-like hydrolase K01091 - 3.1.3.18 0.0000000000000000000000000000001234 134.0
HKD3_k127_1331502_0 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 529.0
HKD3_k127_1331502_1 Outer membrane lipoprotein-sorting protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000327 345.0
HKD3_k127_1331502_2 PFAM ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 306.0
HKD3_k127_1331502_3 - - - - 0.00000000000000000000000000004442 122.0
HKD3_k127_1331502_4 Transglycosylase K05367 - 2.4.1.129 0.0007427 42.0
HKD3_k127_1337618_0 PFAM NADH flavin oxidoreductase NADH oxidase - - - 5.326e-255 801.0
HKD3_k127_1337618_1 Putative RNA methylase family UPF0020 K07444,K12297 - 2.1.1.173,2.1.1.264 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003097 462.0
HKD3_k127_1337618_2 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003814 310.0
HKD3_k127_1337618_3 PFAM short chain dehydrogenase K00046,K00065,K18009 - 1.1.1.127,1.1.1.304,1.1.1.69,1.1.1.76 0.00000000000000000000000000000000000000000000000000000000000000000000000000001985 267.0
HKD3_k127_1337618_4 YhcH YjgK YiaL family - - - 0.000000000000000000000000000000000000000000003137 168.0
HKD3_k127_1337618_5 hydrogenase maturation protease K03605 - - 0.000000000000000000005338 98.0
HKD3_k127_1337618_6 two component, sigma54 specific, transcriptional regulator, Fis family K02481 - - 0.0000000000000008323 83.0
HKD3_k127_1337618_7 Uncharacterised protein family UPF0066 - - - 0.000001216 50.0
HKD3_k127_1341180_0 PFAM glycosyl transferase group 1 K15521 - 2.4.1.250 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006536 380.0
HKD3_k127_1341180_1 PFAM inositol monophosphatase K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002568 307.0
HKD3_k127_1341180_2 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000001638 201.0
HKD3_k127_1341180_3 - - - - 0.00000000000000000000000313 107.0
HKD3_k127_1345022_0 peptidase S16 K01338,K04076,K04770 - 3.4.21.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008319 408.0
HKD3_k127_1345022_1 radical SAM domain protein K04070 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005853 411.0
HKD3_k127_1345022_2 Carboxymuconolactone decarboxylase family K01607 - 4.1.1.44 0.000000000000000000000000000000000000000000000000000000001382 205.0
HKD3_k127_1345022_3 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.00000001368 58.0
HKD3_k127_1354606_0 CO dehydrogenase acetyl-CoA synthase delta subunit K00197 - 2.1.1.245 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003909 594.0
HKD3_k127_1354606_1 PFAM CO dehydrogenase acetyl-CoA synthase complex beta subunit K14138 - 2.3.1.169 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000099 421.0
HKD3_k127_1354606_2 Pterin binding enzyme K15023 - 2.1.1.258 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003982 346.0
HKD3_k127_1354606_3 Domain of unknown function (DUF3786) - - - 0.000000000000000000000000000000001044 139.0
HKD3_k127_1354606_4 CobQ/CobB/MinD/ParA nucleotide binding domain K07321 - - 0.00000002525 55.0
HKD3_k127_1361942_0 dipeptide transport K02035 - - 2.013e-224 706.0
HKD3_k127_1361942_1 nitrogen compound transport K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000185 437.0
HKD3_k127_1361942_2 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003446 422.0
HKD3_k127_1361942_3 UbiA prenyltransferase family K03179 - 2.5.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009986 342.0
HKD3_k127_1361942_4 Cytochrome b5-like Heme/Steroid binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001116 284.0
HKD3_k127_1361942_5 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000004101 205.0
HKD3_k127_1361942_6 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00184 - - 0.0000000000000000000000000000000000003716 143.0
HKD3_k127_1363815_0 Iron-containing alcohol dehydrogenase K13954,K19714 GO:0003674,GO:0003824,GO:0004022,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016616,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.1.1.1,1.1.3.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009381 443.0
HKD3_k127_1363815_1 response regulator, receiver - - - 0.000000000000000009299 84.0
HKD3_k127_1374924_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1179.0
HKD3_k127_1374924_1 Heat shock 70 kDa protein K04043 - - 3.608e-303 940.0
HKD3_k127_1374924_10 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 361.0
HKD3_k127_1374924_11 ABC transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004698 290.0
HKD3_k127_1374924_12 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086,K03089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008538 301.0
HKD3_k127_1374924_13 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001072 268.0
HKD3_k127_1374924_14 PFAM ABC transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002954 262.0
HKD3_k127_1374924_15 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.00000000000000000000000000000000000000000000000000000000000000000002539 245.0
HKD3_k127_1374924_16 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000000000000001366 182.0
HKD3_k127_1374924_17 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.0000000000000000000000000000000000007996 149.0
HKD3_k127_1374924_18 Domain of unknown function (DUF1844) - - - 0.000000000000000000000000009307 115.0
HKD3_k127_1374924_19 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.000000002554 60.0
HKD3_k127_1374924_2 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001996 518.0
HKD3_k127_1374924_3 Receptor family ligand binding region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003165 516.0
HKD3_k127_1374924_4 Belongs to the ClpA ClpB family K03696 GO:0006950,GO:0008150,GO:0010035,GO:0010038,GO:0042221,GO:0046686,GO:0046688,GO:0050896,GO:0097501,GO:1990169,GO:1990170 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006348 522.0
HKD3_k127_1374924_5 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005251 494.0
HKD3_k127_1374924_6 PDZ domain (Also known as DHR or GLGF) K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004039 483.0
HKD3_k127_1374924_7 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K03851,K15372 - 2.6.1.55,2.6.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001964 454.0
HKD3_k127_1374924_8 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005462 430.0
HKD3_k127_1374924_9 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 392.0
HKD3_k127_1394223_0 CobQ CobB MinD ParA nucleotide binding domain K08252,K13661,K16554,K16692 - 2.7.10.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004078 582.0
HKD3_k127_1394223_1 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006093 567.0
HKD3_k127_1394223_10 Polysaccharide export protein K01991 - - 0.000000000000000000000000000000000000000000000000000414 199.0
HKD3_k127_1394223_11 transcriptional regulator, AsnC family - - - 0.000000000000000000000000000000000000000000000003682 177.0
HKD3_k127_1394223_12 PFAM Polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000000000006994 180.0
HKD3_k127_1394223_13 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0030964,GO:0032991,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0098796,GO:1901135,GO:1901360,GO:1901564,GO:1902494 1.6.5.3 0.000000000000000000000000000000000000000000005914 166.0
HKD3_k127_1394223_14 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000005526 177.0
HKD3_k127_1394223_15 - - - - 0.00000000000000000000000000000000000000004564 158.0
HKD3_k127_1394223_16 - - - - 0.0000000000000000000000000000000000008977 143.0
HKD3_k127_1394223_17 photosynthesis - - - 0.000000000000000000000000000000000001333 145.0
HKD3_k127_1394223_18 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000003797 151.0
HKD3_k127_1394223_19 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.0000000000000005999 83.0
HKD3_k127_1394223_2 PFAM Aminotransferase class-III K01845 - 5.4.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005451 544.0
HKD3_k127_1394223_20 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter K02116 - - 0.00000000004101 66.0
HKD3_k127_1394223_21 DnaJ molecular chaperone homology domain K05516 - - 0.0000000009036 71.0
HKD3_k127_1394223_22 AAA domain K06873 - - 0.000000001926 69.0
HKD3_k127_1394223_23 cytochrome c nitrate reductase, small subunit K15876 - - 0.000000513 59.0
HKD3_k127_1394223_24 iron ion homeostasis - - - 0.0001081 53.0
HKD3_k127_1394223_3 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K08352 - 1.8.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001856 485.0
HKD3_k127_1394223_4 PFAM Polysulphide reductase, NrfD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007793 374.0
HKD3_k127_1394223_5 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000002154 267.0
HKD3_k127_1394223_6 it plays a direct role in the translocation of protons across the membrane K02108 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016021,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0042777,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000000000000000000000000000000000000000000000000000001027 217.0
HKD3_k127_1394223_7 O-Antigen ligase - - - 0.000000000000000000000000000000000000000000000000000000000003138 227.0
HKD3_k127_1394223_8 protein tyrosine phosphatase activity K01104 - 3.1.3.48 0.00000000000000000000000000000000000000000000000000000000002242 218.0
HKD3_k127_1394223_9 - - - - 0.0000000000000000000000000000000000000000000000000000001177 209.0
HKD3_k127_1416535_0 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000745 468.0
HKD3_k127_1416535_1 serine-type endopeptidase activity - - - 0.000000000000000002149 96.0
HKD3_k127_1421644_0 PFAM DAHP synthetase I KDSA K03856,K04516 - 2.5.1.54,5.4.99.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009468 499.0
HKD3_k127_1421644_1 PFAM aldo keto reductase K07079 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004304 461.0
HKD3_k127_1421644_2 Tripartite tricarboxylate transporter TctA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003063 449.0
HKD3_k127_1421644_3 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003419 382.0
HKD3_k127_1421644_4 Prephenate dehydratase K14170 GO:0003674,GO:0003824,GO:0004664,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006558,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009094,GO:0009095,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0019438,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902221,GO:1902223 4.2.1.51,5.4.99.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002383 338.0
HKD3_k127_1421644_5 - - - - 0.0000000000000000000000000000000000000000000000000000000004102 214.0
HKD3_k127_1421644_6 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000009203 204.0
HKD3_k127_1421644_7 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K13832 - 1.1.1.25,4.2.1.10 0.000000000000000000000000000000000002265 147.0
HKD3_k127_1421644_8 protein targeting K09858 - - 0.0000000000000000000000000000000001124 155.0
HKD3_k127_1448419_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 5.422e-298 926.0
HKD3_k127_1448419_1 TIGRFAM oxaloacetate decarboxylase alpha subunit K01960 - 6.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 593.0
HKD3_k127_1448419_2 ATP phosphoribosyltransferase K00765 - 2.4.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005105 422.0
HKD3_k127_1448419_3 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K15778 - 5.4.2.2,5.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009188 338.0
HKD3_k127_1448419_4 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496 - 3.5.4.19 0.00000000000000000000000000000000000000000000000007794 180.0
HKD3_k127_1448419_5 PFAM oxidoreductase FAD NAD(P)-binding domain protein K00528,K16951 - 1.18.1.2,1.19.1.1 0.0001283 47.0
HKD3_k127_1453189_0 Aminotransferase class-V - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002143 461.0
HKD3_k127_1453189_1 AAA domain, putative AbiEii toxin, Type IV TA system K02006 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003271 321.0
HKD3_k127_1453189_2 Cobalt uptake substrate-specific transmembrane region K02007 - - 0.000000000000001809 79.0
HKD3_k127_1454326_0 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 0.0 1011.0
HKD3_k127_1454326_1 Pyruvate kinase, barrel domain K00873 - 2.7.1.40 2.728e-207 655.0
HKD3_k127_1454326_2 Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Atypical ATP- dependent clade X sub-subfamily K00850 - 2.7.1.11 1.562e-195 617.0
HKD3_k127_1454326_3 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005738 597.0
HKD3_k127_1454326_4 - - - - 0.00000000005386 65.0
HKD3_k127_1454326_5 His Kinase A (phosphoacceptor) domain - - - 0.0008791 47.0
HKD3_k127_1463297_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004966 457.0
HKD3_k127_1463297_1 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002718 399.0
HKD3_k127_1463297_2 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000004019 258.0
HKD3_k127_1463297_3 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.00000000000000000000000000000000000001007 153.0
HKD3_k127_1463297_4 Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate K03785 - 4.2.1.10 0.000000000000000000000000000000000003189 142.0
HKD3_k127_1472090_0 Tripartite tricarboxylate transporter TctA family K07793 - - 9.89e-226 708.0
HKD3_k127_1472090_1 MutL protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 466.0
HKD3_k127_1472090_2 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003012 434.0
HKD3_k127_1472090_3 Catalyzes the carbon skeleton rearrangement of L- glutamate to L-threo-3-methylaspartate ((2S,3S)-3- methylaspartate) K01846 - 5.4.99.1 0.000000000000000000000000000000000000000000000000005765 186.0
HKD3_k127_1472090_4 Catalyzes the carbon skeleton rearrangement of L- glutamate to L-threo-3-methylaspartate ((2S,3S)-3- methylaspartate) K19268 - 5.4.99.1 0.000000000000000000000000000000000000000000000000168 181.0
HKD3_k127_1472090_5 Tripartite tricarboxylate transporter TctB family K07794 - - 0.00000000000000000000000000000001141 135.0
HKD3_k127_14916_0 Dehydratase family - - - 3.448e-221 697.0
HKD3_k127_14916_1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004955 492.0
HKD3_k127_14916_2 Pyruvate:ferredoxin oxidoreductase core domain II K00169 - 1.2.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002453 315.0
HKD3_k127_14916_3 6-phosphogluconate dehydrogenase NAD-binding K00042 - 1.1.1.60 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 297.0
HKD3_k127_14916_4 Pyruvate ferredoxin/flavodoxin oxidoreductase K00172 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000008403 215.0
HKD3_k127_1506777_0 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta) K01615 - 4.1.1.70 0.0 1095.0
HKD3_k127_1506777_1 Belongs to the enoyl-CoA hydratase isomerase family K07546,K08299,K15866 - 4.2.1.149,5.3.3.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004006 321.0
HKD3_k127_1506777_2 Bacterial transcriptional activator domain - - - 0.00000000000000000000000000000002563 130.0
HKD3_k127_1506777_3 Universal stress protein family - - - 0.000000000000000000000003515 107.0
HKD3_k127_1506777_4 TIGRFAM TRAP transporter, 4TM 12TM fusion protein - - - 0.00000000000000000000001449 102.0
HKD3_k127_1514472_0 Cation transport protein K03498 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006275 574.0
HKD3_k127_1514472_1 TrkA-N domain K03499 - - 0.000000000000000000000000000000000000000000000000005355 183.0
HKD3_k127_1514472_2 MgtE intracellular - - - 0.000000002332 61.0
HKD3_k127_1517998_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 2.276e-224 713.0
HKD3_k127_1517998_1 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002113 317.0
HKD3_k127_1517998_2 CoA binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001843 297.0
HKD3_k127_1517998_3 creatininase K01470 - 3.5.2.10 0.0000000000000000000000000000000000000000000000000000000000000003417 229.0
HKD3_k127_1517998_4 Mycolic acid cyclopropane synthetase - - - 0.000000000000000000000000000000000000000000000000000000000000001586 224.0
HKD3_k127_1517998_5 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000002704 134.0
HKD3_k127_152637_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003846 563.0
HKD3_k127_152637_1 response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001283 404.0
HKD3_k127_152637_2 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02481 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001005 277.0
HKD3_k127_152637_3 PAS fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008488 277.0
HKD3_k127_152637_4 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.000000000000000000000000000000000000000000000000008832 203.0
HKD3_k127_1528655_0 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002348 428.0
HKD3_k127_1528655_1 Dihydroorotate dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 361.0
HKD3_k127_1528655_2 inositol 2-dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004502 311.0
HKD3_k127_1528655_3 Xylose isomerase-like TIM barrel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006965 261.0
HKD3_k127_1528655_4 Domain of unknown function (DUF362) - - - 0.0000000000000000000000008892 109.0
HKD3_k127_1530405_0 Tripartite tricarboxylate transporter TctA family K07793 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003554 464.0
HKD3_k127_1530405_1 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009089 477.0
HKD3_k127_1530405_10 Tripartite tricarboxylate transporter TctB family - - - 0.0000466 52.0
HKD3_k127_1530405_2 Elongator protein 3, MiaB family, Radical SAM K03644 - 2.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000291 341.0
HKD3_k127_1530405_3 Mandelate Racemase Muconate Lactonizing - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 347.0
HKD3_k127_1530405_4 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001848 315.0
HKD3_k127_1530405_5 Metallo-beta-lactamase superfamily K06897 - 2.5.1.105 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005578 291.0
HKD3_k127_1530405_6 Xylose isomerase-like TIM barrel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007934 275.0
HKD3_k127_1530405_7 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.000000000000000000000000000000000000000000000000000001205 199.0
HKD3_k127_1530405_8 ATP-independent chaperone mediated protein folding K07803 GO:0003674,GO:0005488,GO:0005507,GO:0005575,GO:0005623,GO:0008270,GO:0016151,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043167,GO:0043169,GO:0044464,GO:0046872,GO:0046914,GO:0050897 - 0.00000000004751 73.0
HKD3_k127_1530405_9 - - - - 0.00000000007357 65.0
HKD3_k127_1536383_0 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005085 276.0
HKD3_k127_1536383_1 MarR family - - - 0.0000000000000000000000000000000000003225 144.0
HKD3_k127_1536383_2 Nitroreductase family - - - 0.000000000000000000000000000000000006718 147.0
HKD3_k127_1536383_3 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) - - - 0.000000000000000002432 91.0
HKD3_k127_1557130_0 Sugar (and other) transporter K03446 - - 1.962e-227 714.0
HKD3_k127_1557130_1 NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000771 567.0
HKD3_k127_1557130_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.0000000000000000000000000000000004522 135.0
HKD3_k127_1557130_11 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.0000000000000000000000000000000189 126.0
HKD3_k127_1557130_12 TIGRFAM NADH-quinone oxidoreductase, chain G K00336 - 1.6.5.3 0.000000000000002921 81.0
HKD3_k127_1557130_2 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus K00341 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001449 538.0
HKD3_k127_1557130_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 454.0
HKD3_k127_1557130_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001845 440.0
HKD3_k127_1557130_5 HlyD membrane-fusion protein of T1SS K03543 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 365.0
HKD3_k127_1557130_6 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002198 317.0
HKD3_k127_1557130_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.000000000000000000000000000000000000000000003835 165.0
HKD3_k127_1557130_8 Glucose-6-phosphate dehydrogenase, NAD binding domain K00036 - 1.1.1.363,1.1.1.49 0.000000000000000000000000000000000000001981 150.0
HKD3_k127_1557130_9 PFAM NADH-ubiquinone plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.00000000000000000000000000000000000004565 149.0
HKD3_k127_1565578_0 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001845 366.0
HKD3_k127_1565578_1 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002806 337.0
HKD3_k127_1565578_2 Branched-chain amino acid transport system / permease component K01998 - - 0.000000000000000000000000000000001739 136.0
HKD3_k127_1565578_3 Major Facilitator Superfamily - - - 0.00000000000000000002798 99.0
HKD3_k127_1566862_0 DNA-templated transcription, termination K02887,K03628 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576 - 5.889e-206 646.0
HKD3_k127_1566862_1 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 474.0
HKD3_k127_1566862_2 Protein of unknown function (DUF1385) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003291 327.0
HKD3_k127_1566862_3 S4 RNA-binding domain K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003676 326.0
HKD3_k127_1566862_4 Patatin-like phospholipase K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001183 261.0
HKD3_k127_1566862_5 Multi-copper polyphenol oxidoreductase laccase K05810 - - 0.00000000000000000000000000000000000000000000000005075 187.0
HKD3_k127_1566862_6 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464 2.1.1.297 0.000000000000000000000000000000004646 133.0
HKD3_k127_1566862_7 Binds the 23S rRNA K02909 - - 0.000000000000000000000000001202 112.0
HKD3_k127_156942_0 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002094 452.0
HKD3_k127_156942_1 Putative cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008645 379.0
HKD3_k127_156942_2 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000197 295.0
HKD3_k127_156942_3 indolepyruvate ferredoxin oxidoreductase, beta subunit K00180 - 1.2.7.8 0.000000000000000000000000000000000000000000000000000000000000000004885 233.0
HKD3_k127_156942_4 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 0.000000000000000000000000000000002099 130.0
HKD3_k127_1590008_0 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008402 481.0
HKD3_k127_1590008_1 TIGRFAM TRAP transporter solute receptor, TAXI family K07080 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002547 351.0
HKD3_k127_1590008_2 acyl-CoA dehydrogenase K16173 - 1.3.99.32 0.000000000000000000000000000000000000000000000000000002014 193.0
HKD3_k127_1593717_0 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant K03465 - 2.1.1.148 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002647 308.0
HKD3_k127_1593717_1 Domain of unknown function (DUF4388) - - - 0.000000000000000000000000000000000008024 150.0
HKD3_k127_1593717_2 TIGRFAM acetyl coenzyme A synthetase (ADP forming), alpha domain K01905,K22224 - 6.2.1.13 0.00000000000000000000000000000005534 130.0
HKD3_k127_1593717_3 Tetratricopeptide repeat - - - 0.000000000000000000002602 109.0
HKD3_k127_1620144_0 Cys/Met metabolism PLP-dependent enzyme K01739,K01761 - 2.5.1.48,4.4.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002277 433.0
HKD3_k127_1620144_1 PFAM 2-nitropropane dioxygenase NPD K00459 - 1.13.12.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002339 389.0
HKD3_k127_1620144_2 Belongs to the peptidase M48B family K03799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002342 355.0
HKD3_k127_1620144_3 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006701 343.0
HKD3_k127_1620144_4 4Fe-4S dicluster domain - - - 0.0000000000000000001208 97.0
HKD3_k127_1620144_5 bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding K11923 - - 0.000000000003264 72.0
HKD3_k127_1620144_6 COG NOG16874 non supervised orthologous group - - - 0.00000004651 57.0
HKD3_k127_1620144_7 binding domain protein - - - 0.000003296 50.0
HKD3_k127_163236_0 Fumarate reductase flavoprotein C-term - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005754 579.0
HKD3_k127_163236_1 Pyridine nucleotide-disulphide oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000363 464.0
HKD3_k127_163236_2 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008456 406.0
HKD3_k127_163236_3 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003103 402.0
HKD3_k127_163236_4 Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system K10441 - 3.6.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008124 279.0
HKD3_k127_163236_5 PFAM Extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000002756 122.0
HKD3_k127_1633709_0 PFAM Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005603 371.0
HKD3_k127_1650515_0 FGGY family of carbohydrate kinases, N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004644 517.0
HKD3_k127_1650515_1 KduI/IolB family K03337 - 5.3.1.30 0.000000000000000000000000000000000000000000000009 182.0
HKD3_k127_1654537_0 signal transduction histidine kinase K07716 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002943 576.0
HKD3_k127_1654537_1 sigma54 specific, transcriptional regulator, Fis family - - - 0.00000000000000000000000000000000000000000000000001269 188.0
HKD3_k127_1660700_0 Tripartite tricarboxylate transporter TctA family K07793 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001921 612.0
HKD3_k127_1660700_1 PFAM Short-chain dehydrogenase reductase SDR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009517 343.0
HKD3_k127_1660700_2 Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000002153 206.0
HKD3_k127_1660700_3 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000003693 207.0
HKD3_k127_1660700_4 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000006451 203.0
HKD3_k127_1660700_5 membrane K07794 - - 0.000000000001563 74.0
HKD3_k127_166565_0 Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003135 536.0
HKD3_k127_166565_1 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003307 357.0
HKD3_k127_166565_2 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007341 348.0
HKD3_k127_166565_3 Belongs to the binding-protein-dependent transport system permease family K01997,K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002503 304.0
HKD3_k127_166565_4 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001182 275.0
HKD3_k127_166565_5 ABC transporter, ATP-binding protein K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003568 244.0
HKD3_k127_166565_6 PFAM ThiJ PfpI K05520 - 3.5.1.124 0.000000000000000000000000000000000000000000000000000000009244 203.0
HKD3_k127_166565_7 Transcriptional regulator, IclR family - - - 0.000000000000000000000000000000000000000003053 164.0
HKD3_k127_166565_8 Stage II sporulation protein M K06384 - - 0.0000000000000000000000161 108.0
HKD3_k127_1665743_0 PFAM Silent information regulator protein Sir2 K12410 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006138 268.0
HKD3_k127_1665743_1 PFAM phosphoesterase, RecJ domain protein K07462 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005615 259.0
HKD3_k127_1665743_2 Bifunctional nuclease K03617,K08999 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000001961 178.0
HKD3_k127_1665743_3 phosphoserine phosphatase SerB K01079 - 3.1.3.3 0.0000000000000000000000000000000000000000000007703 174.0
HKD3_k127_1665743_4 deoxyhypusine monooxygenase activity - - - 0.000000000000000000003536 107.0
HKD3_k127_1665743_5 - - - - 0.000000000000000006769 85.0
HKD3_k127_1672254_0 4Fe-4S dicluster domain - - - 3.713e-224 712.0
HKD3_k127_1672254_1 electron transfer flavoprotein, alpha subunit K03522 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003806 554.0
HKD3_k127_1672254_2 PFAM Electron transfer flavoprotein alpha beta-subunit K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 345.0
HKD3_k127_1672254_3 Acetyl-CoA hydrolase/transferase N-terminal domain K18122 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000198 342.0
HKD3_k127_1672254_4 Belongs to the ABC transporter superfamily K02032,K10823 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002064 331.0
HKD3_k127_1672254_5 alpha/beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005301 316.0
HKD3_k127_1672254_6 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001585 268.0
HKD3_k127_1672254_7 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 0.0000000000000000000001159 115.0
HKD3_k127_1676454_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 4.398e-315 1002.0
HKD3_k127_1676454_1 TRAP transporter, 4TM 12TM fusion protein - - - 1.774e-235 747.0
HKD3_k127_1676454_10 Psort location Cytoplasmic, score 8.87 K00097,K22024 - 1.1.1.262,1.1.1.408,1.1.1.409 0.00004046 47.0
HKD3_k127_1676454_2 SMART Elongator protein 3 MiaB NifB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008164 598.0
HKD3_k127_1676454_3 beta-lactamase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003458 378.0
HKD3_k127_1676454_4 TRAP transporter, solute receptor (TAXI family K07080 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002926 327.0
HKD3_k127_1676454_5 PFAM cytochrome c biogenesis protein, transmembrane region K06196 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006474 256.0
HKD3_k127_1676454_6 - - - - 0.000000000000000000000000000000000000000000000000000000006356 207.0
HKD3_k127_1676454_7 SurA N-terminal domain K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000002488 191.0
HKD3_k127_1676454_8 Protein of unknown function, DUF488 - - - 0.000000000000000000000000000000000042 150.0
HKD3_k127_1676454_9 Transposase (IS116 IS110 IS902 family) - - - 0.000000000000000000004788 100.0
HKD3_k127_1697390_0 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007625 317.0
HKD3_k127_1697390_1 Bifunctional nuclease K08999 - - 0.00000000000000005431 91.0
HKD3_k127_1716441_0 Belongs to the thiolase family K00626 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004214 537.0
HKD3_k127_1716441_1 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.00000000000000000000000000000000000000000000000000002221 194.0
HKD3_k127_1718891_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 5.512e-277 863.0
HKD3_k127_1718891_1 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 GO:0003674,GO:0003824,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016854,GO:0052855,GO:0052856,GO:0052857 4.2.1.136,5.1.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008774 482.0
HKD3_k127_1718891_10 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.0000417 51.0
HKD3_k127_1718891_2 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003687 334.0
HKD3_k127_1718891_3 PFAM aspartate glutamate uridylate kinase K00928 - 2.7.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006728 304.0
HKD3_k127_1718891_4 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000244 303.0
HKD3_k127_1718891_5 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 GO:0003674,GO:0003824,GO:0004156,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004835 299.0
HKD3_k127_1718891_6 PFAM Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.0000000000000000000000000000000000000000003559 169.0
HKD3_k127_1718891_7 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.000000000000000000000000000000000001764 148.0
HKD3_k127_1718891_8 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.000000000000000000000000000000114 127.0
HKD3_k127_1718891_9 Belongs to the pseudouridine synthase RsuA family K06178,K06183 - 5.4.99.19,5.4.99.22 0.000000000000000000000008476 105.0
HKD3_k127_1724174_0 Belongs to the precorrin methyltransferase family K02302,K02303,K13542 - 1.3.1.76,2.1.1.107,4.2.1.75,4.99.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005758 586.0
HKD3_k127_1724174_1 radical SAM domain protein K22226 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002693 424.0
HKD3_k127_1724174_2 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.00000000000000000000000000000000000000000000004362 176.0
HKD3_k127_1724606_0 cell redox homeostasis - - - 1.649e-206 652.0
HKD3_k127_1724606_1 beta-lactamase domain protein - - - 0.000000000000000000000000000000000000000000000000002109 199.0
HKD3_k127_1724606_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000002778 106.0
HKD3_k127_1741607_0 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 424.0
HKD3_k127_1741607_1 Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004557 281.0
HKD3_k127_1741607_2 Alcohol dehydrogenase GroES-like domain K00001,K00008 - 1.1.1.1,1.1.1.14 0.0000000000000000001896 93.0
HKD3_k127_1748088_0 imidazolonepropionase activity K01468 - 3.5.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003373 442.0
HKD3_k127_1748088_1 Formiminotransferase-cyclodeaminase - - - 0.0000000000000000000000002845 110.0
HKD3_k127_1753316_0 Na dependent nucleoside transporter K03317 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002039 531.0
HKD3_k127_1753316_1 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002305 486.0
HKD3_k127_1753316_2 PFAM Archaeal ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004613 331.0
HKD3_k127_1753316_3 racemase activity, acting on amino acids and derivatives - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007068 272.0
HKD3_k127_1753316_4 Protein of unknown function (DUF1016) - - - 0.00000000000000000000000000000000000000000001328 167.0
HKD3_k127_1753316_5 metallophosphoesterase K07096 - - 0.000000000000000000000000000000000000000001759 166.0
HKD3_k127_1753316_6 PFAM Carboxymuconolactone decarboxylase - - - 0.000000000000000000000000000000002619 130.0
HKD3_k127_1753316_7 PFAM TM2 domain containing protein K03686 - - 0.000000001723 62.0
HKD3_k127_1753665_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008341 563.0
HKD3_k127_1753665_1 Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003073 401.0
HKD3_k127_1753665_2 PFAM RNA binding S1 domain protein K02945 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003471 361.0
HKD3_k127_1753665_3 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007234 271.0
HKD3_k127_1753665_4 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.0000000000000000000000000000000000000000000000000000000000000000001207 238.0
HKD3_k127_1753665_5 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K06879,K09457 - 1.7.1.13 0.000000000000000000000000000000000000000000000000000000006441 202.0
HKD3_k127_1753665_6 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000000000000000000000000000006205 148.0
HKD3_k127_1753665_7 PFAM MaoC domain protein dehydratase K17865 - 4.2.1.55 0.000000004699 59.0
HKD3_k127_1753665_8 superoxide reductase activity K05919 - 1.15.1.2 0.000000008116 62.0
HKD3_k127_1782044_0 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL CutL-like protein K07303 - 1.3.99.16 1.14e-298 941.0
HKD3_k127_1782044_1 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000000000000001161 236.0
HKD3_k127_1782044_2 Phosphatidylethanolamine-binding protein K06910 - - 0.00000000000000000000000000000000000000000000000000000000000000492 223.0
HKD3_k127_1782044_3 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant - - - 0.000000000000000000000000000000000000000000000000000000000005308 214.0
HKD3_k127_1791296_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002502 330.0
HKD3_k127_1791296_1 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097,K22024 - 1.1.1.262,1.1.1.408,1.1.1.409 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001051 282.0
HKD3_k127_1797938_0 PFAM Tripartite tricarboxylate transporter TctA family K07793 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004258 481.0
HKD3_k127_1797938_1 membrane K07794 - - 0.0009159 48.0
HKD3_k127_1798829_0 TIGRFAM signal peptidase I K03100 - 3.4.21.89 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002552 273.0
HKD3_k127_1798829_1 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000002894 112.0
HKD3_k127_1798829_2 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.0000000000000000002025 90.0
HKD3_k127_1809645_0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00335 - 1.6.5.3 3.5e-241 762.0
HKD3_k127_1809645_1 Thioredoxin-like [2Fe-2S] ferredoxin K00334,K03388 - 1.6.5.3,1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000001392 165.0
HKD3_k127_1809645_2 Iron hydrogenase small subunit K00123,K00336,K18332 - 1.12.1.3,1.17.1.9,1.6.5.3 0.0000000000000000000000000000000000000996 158.0
HKD3_k127_1825966_0 Domain of unknown function (DUF2088) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002744 403.0
HKD3_k127_1825966_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family - - - 0.0000000000000000000007448 98.0
HKD3_k127_1834554_0 Pyruvate ferredoxin/flavodoxin oxidoreductase K00177 - 1.2.7.3 0.00000000000000000000000000000000000000000000000000000000007116 210.0
HKD3_k127_1834554_1 NUDIX domain - - - 0.00000000000000000000000000000000000000000000000002742 183.0
HKD3_k127_1835345_0 e3 binding domain K00658,K09699 GO:0003674,GO:0003824,GO:0004149,GO:0005488,GO:0005504,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0008289,GO:0009060,GO:0009987,GO:0015980,GO:0016417,GO:0016740,GO:0016746,GO:0016747,GO:0016748,GO:0016751,GO:0016999,GO:0017144,GO:0019752,GO:0031405,GO:0031406,GO:0032991,GO:0033293,GO:0036094,GO:0043167,GO:0043168,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045333,GO:0048037,GO:0050662,GO:0055114,GO:0071704,GO:0072350,GO:0097159,GO:0140096,GO:1901363,GO:1901681,GO:1902494,GO:1990204,GO:1990234 2.3.1.168,2.3.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009821 291.0
HKD3_k127_1835345_1 Transketolase, pyrimidine binding domain K11381 - 1.2.4.4 0.000000000000000000000000000000003595 130.0
HKD3_k127_1835345_2 Tripartite tricarboxylate transporter TctA family K07793 - - 0.00000000000000003835 82.0
HKD3_k127_1835345_3 Tripartite tricarboxylate transporter TctB family K07794 - - 0.000000001861 68.0
HKD3_k127_1862651_0 Belongs to the thiolase family K00632 - 2.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001546 351.0
HKD3_k127_1862651_1 PFAM 4Fe-4S ferredoxin K08358 - - 0.00000000000000000000000000000000000000000000000000000000001676 209.0
HKD3_k127_1862651_3 AhpC/TSA family K03564 - 1.11.1.15 0.0000000000000000000001896 100.0
HKD3_k127_1862651_4 - - - - 0.00000000000000009124 82.0
HKD3_k127_1895772_0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 477.0
HKD3_k127_1895772_1 Pyruvate:ferredoxin oxidoreductase core domain II K00169 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007957 447.0
HKD3_k127_1895772_2 PFAM Thiamine pyrophosphate K00170,K00187 - 1.2.7.1,1.2.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 405.0
HKD3_k127_1895772_3 Pyruvate ferredoxin/flavodoxin oxidoreductase K00172 - 1.2.7.1 0.000000000000000000000000000000000000000000000000000000000000000002979 230.0
HKD3_k127_1895772_4 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000000000000001951 185.0
HKD3_k127_1895772_5 4Fe-4S dicluster domain K11473 - - 0.000000000000000000005188 94.0
HKD3_k127_1895772_6 serine-type endopeptidase activity K08070,K08372 - 1.3.1.74 0.0000009344 54.0
HKD3_k127_1902468_0 PFAM cytochrome c assembly protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003972 351.0
HKD3_k127_1902468_1 PFAM ResB family protein K07399 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000368 320.0
HKD3_k127_1902468_2 Cytochrome c7 and related cytochrome c - - - 0.00000000000000001443 87.0
HKD3_k127_191157_0 General secretory system II, protein E domain protein K02652 - - 5.456e-243 762.0
HKD3_k127_191157_1 Tripartite ATP-independent periplasmic transporter, DctM component - - - 2.378e-220 714.0
HKD3_k127_191157_10 PGAP1-like protein - - - 0.000001268 60.0
HKD3_k127_191157_11 Domain of unknown function (DUF1850) - - - 0.00001069 55.0
HKD3_k127_191157_2 Type II secretion system (T2SS), protein F K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003914 484.0
HKD3_k127_191157_3 Glycoprotease family K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004894 392.0
HKD3_k127_191157_4 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145,K05829 - 1.2.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000063 392.0
HKD3_k127_191157_5 Competence-damaged protein K03742,K03743 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 3.5.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001238 336.0
HKD3_k127_191157_6 TRAP transporter, solute receptor (TAXI family K07080 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004185 265.0
HKD3_k127_191157_7 PP-loop family K14058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002971 252.0
HKD3_k127_191157_8 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 0.000000000000000000000000000000000000000000000000000000000000000128 231.0
HKD3_k127_191157_9 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.00000000000000000000000000000000000000002926 158.0
HKD3_k127_1915967_0 Tetratricopeptide TPR_2 repeat protein - - - 0.00000000000000000000000000000000000000005769 158.0
HKD3_k127_1915967_1 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.00000000000000000000000000000000007442 141.0
HKD3_k127_1917627_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 3.203e-220 702.0
HKD3_k127_1917627_1 PFAM 4-hydroxyphenylacetate 3-hydroxylase N terminal K00483,K14534 - 1.14.14.9,4.2.1.120,5.3.3.3 6.661e-200 629.0
HKD3_k127_1917627_2 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008334 537.0
HKD3_k127_1917627_3 Hydrogenase expression formation protein (HypE) K04655 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002146 339.0
HKD3_k127_1917627_4 Desulfoferrodoxin ferrous iron-binding domain K05919 - 1.15.1.2 0.00000001484 57.0
HKD3_k127_1950384_0 Belongs to the binding-protein-dependent transport system permease family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002848 383.0
HKD3_k127_1950384_1 Belongs to the binding-protein-dependent transport system permease family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000044 342.0
HKD3_k127_1950384_2 TIGRFAM amidohydrolase K12941 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009464 346.0
HKD3_k127_1950384_3 Peptidase dimerisation domain K12941 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008833 336.0
HKD3_k127_1950384_4 ABC transporter related K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001054 284.0
HKD3_k127_1950384_5 Peptidase dimerisation domain K01295 - 3.4.17.11 0.000000000000000000000000000000000000000000000000000000000000000000000000005929 267.0
HKD3_k127_1950384_7 branched-chain amino acid K01995 - - 0.0000000003779 60.0
HKD3_k127_1950384_8 PIN domain K07063 - - 0.000000009497 59.0
HKD3_k127_1967194_0 Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006307 332.0
HKD3_k127_1967194_2 carbohydrate transport K02027 - - 0.000000000000000000000000000000000000000000000000000000001606 217.0
HKD3_k127_1967194_3 Binding-protein-dependent transport system inner membrane component K02025,K10118 - - 0.000000000000000000000000000000000000009365 153.0
HKD3_k127_1967194_4 Glyco_18 - - - 0.000000000000000002036 98.0
HKD3_k127_1967194_5 COG0791 Cell wall-associated hydrolases (invasion-associated proteins) - - - 0.00000000007033 68.0
HKD3_k127_199040_0 PEP-utilising enzyme, mobile domain K01006 - 2.7.9.1 0.0 1138.0
HKD3_k127_199040_1 Domain of unknown function (DUF2088) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002696 353.0
HKD3_k127_199040_2 phosphosulfolactate synthase activity K08097 - 4.4.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005339 339.0
HKD3_k127_199040_3 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058,K16843 - 1.1.1.310,1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002243 293.0
HKD3_k127_199040_4 Acyl CoA acetate 3-ketoacid CoA transferase beta subunit K01040 - 2.8.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000127 252.0
HKD3_k127_199040_5 - - - - 0.000000000000000000000000000000000000000000000009682 184.0
HKD3_k127_199040_6 PFAM Iron-containing alcohol dehydrogenase - - - 0.0007 43.0
HKD3_k127_20287_0 ectoine utilization protein EutD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 343.0
HKD3_k127_20287_1 PFAM thiamine pyrophosphate protein domain protein TPP-binding K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007437 286.0
HKD3_k127_20287_2 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000001367 218.0
HKD3_k127_2030210_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K20447 - 1.17.1.5 0.0 1143.0
HKD3_k127_2030210_1 ATPase associated with various cellular activities AAA_5 K04748 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001794 374.0
HKD3_k127_2030210_2 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family K13283 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 344.0
HKD3_k127_2030210_3 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM K03519 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002859 336.0
HKD3_k127_2030210_4 von Willebrand factor (vWF) type A domain K02448 - - 0.00000000000000000000000000000000000000000000000000000000000000000000006045 267.0
HKD3_k127_2030210_5 2 iron, 2 sulfur cluster binding K07302 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000128 184.0
HKD3_k127_2030210_6 Conserved hypothetical protein (Lin0512_fam) - - - 0.0000000000000000000007749 97.0
HKD3_k127_2046724_0 Threonine dehydratase K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000336 396.0
HKD3_k127_2046724_1 Catalyzes the conversion of 3'-phosphate to a 2',3'- cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps (A) adenylation of the enzyme by ATP K01974 - 6.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009317 395.0
HKD3_k127_2046724_2 Amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 349.0
HKD3_k127_2046724_3 PFAM Vitamin B12 dependent methionine synthase, activation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001449 254.0
HKD3_k127_2046724_4 thioredoxin peroxidase activity K11065 - 1.11.1.15 0.000000000000000000000000000000000000000001409 167.0
HKD3_k127_2046724_5 Mut7-C RNAse domain K09122 - - 0.0000000000000000000000000005258 118.0
HKD3_k127_2046724_6 Caenorhabditis protein of unknown function, DUF268 - - - 0.000000000000000000001741 104.0
HKD3_k127_2046724_7 - - - - 0.00008529 48.0
HKD3_k127_2091108_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 6.128e-320 992.0
HKD3_k127_2091108_1 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 3.177e-246 762.0
HKD3_k127_2091108_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000002393 237.0
HKD3_k127_2091108_3 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.000000000000000000000000000000000000000000000000000000000000003285 218.0
HKD3_k127_2091108_4 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0000000000000000000347 91.0
HKD3_k127_2091108_5 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.00000000002368 63.0
HKD3_k127_2111111_0 repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002185 289.0
HKD3_k127_2111111_1 PFAM Nitroreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001089 251.0
HKD3_k127_2111111_2 Tripartite tricarboxylate transporter TctA family K07793 - - 0.00000000000000000000000000000197 123.0
HKD3_k127_2111111_3 Tripartite tricarboxylate transporter TctB family - - - 0.0000002512 58.0
HKD3_k127_2112456_0 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01006 - 2.7.9.1 8.03e-313 988.0
HKD3_k127_2112456_1 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001913 496.0
HKD3_k127_2112456_2 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003722 493.0
HKD3_k127_2112456_3 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000468 288.0
HKD3_k127_2112456_4 PFAM Preprotein translocase SecG subunit K03075 - - 0.00000000000000000000000003885 112.0
HKD3_k127_2112456_5 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.0000001626 53.0
HKD3_k127_2147946_0 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000001056 214.0
HKD3_k127_2147946_1 Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.0000000000000000000000000000000000000000000000000000000003555 212.0
HKD3_k127_2168545_0 MacB-like periplasmic core domain K02004 - - 1.09e-218 690.0
HKD3_k127_2168545_1 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005984,GO:0005985,GO:0005986,GO:0005996,GO:0006000,GO:0006002,GO:0006006,GO:0006094,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0019318,GO:0019319,GO:0019637,GO:0030388,GO:0034637,GO:0042132,GO:0042578,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046351,GO:0046364,GO:0050308,GO:0071704,GO:1901135,GO:1901576 3.1.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005109 539.0
HKD3_k127_2168545_2 Lipocalin-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009416 446.0
HKD3_k127_2168545_3 alpha-methylacyl-CoA racemase activity K18703 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0008410,GO:0016740,GO:0016782,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0047369 2.8.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004333 427.0
HKD3_k127_2168545_4 acyl-CoA transferases carnitine dehydratase K08298 GO:0003674,GO:0003824,GO:0006575,GO:0006577,GO:0006579,GO:0006807,GO:0008150,GO:0008152,GO:0008735,GO:0009056,GO:0009437,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0034641,GO:0042219,GO:0042413,GO:0044237,GO:0044248,GO:0044270,GO:0071704,GO:0097164,GO:1901564,GO:1901565,GO:1901575 2.8.3.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002441 411.0
HKD3_k127_2168545_5 Fructose-1,6-bisphosphate aldolase, class II K01624 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002521 374.0
HKD3_k127_2168545_6 Belongs to the peptidase S51 family - - - 0.0000000000002445 78.0
HKD3_k127_2169176_0 PFAM Iron-containing alcohol dehydrogenase K19954 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002749 470.0
HKD3_k127_2169176_1 COGs COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase) K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000005026 217.0
HKD3_k127_2169176_2 glutamate synthase - - - 0.00000000000000000000000000000000000000000000000000000000003957 211.0
HKD3_k127_2169176_3 Pyruvate ferredoxin/flavodoxin oxidoreductase K00172 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000001779 208.0
HKD3_k127_2169176_4 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase - - - 0.000703 42.0
HKD3_k127_2186456_0 PFAM Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738,K19515 - 1.2.7.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006124 505.0
HKD3_k127_2186456_1 Protein of unknown function (DUF1177) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004317 436.0
HKD3_k127_2186456_2 PFAM NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000003031 156.0
HKD3_k127_2186456_3 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000005813 140.0
HKD3_k127_2186456_4 Flavin reductase like domain - - - 0.00000000000000000000000000000006711 137.0
HKD3_k127_2186456_5 EamA-like transporter family - - - 0.0000000000007203 71.0
HKD3_k127_2186456_6 - - - - 0.00006231 54.0
HKD3_k127_2186456_7 ThiS family K03636 - - 0.0008535 47.0
HKD3_k127_219475_0 Domain of unknown function (DUF4129) - - - 0.00000001085 68.0
HKD3_k127_2203561_0 - Catabolite gene activator and regulatory subunit of cAMP-dependent protein K06883 GO:0008150,GO:0032879,GO:0032880,GO:0050789,GO:0065007 - 0.00000000000000000000000000000000000000000000000000000000000000000001154 248.0
HKD3_k127_2203561_1 Tetratricopeptide repeat - - - 0.000000001873 69.0
HKD3_k127_2203561_2 PFAM import inner membrane translocase, subunit Tim44 - - - 0.00002655 53.0
HKD3_k127_2204493_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 3.973e-315 972.0
HKD3_k127_2204493_1 Phenazine biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003989 367.0
HKD3_k127_2204493_2 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003806 363.0
HKD3_k127_2204493_3 Protein of unknown function (DUF933) K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001675 315.0
HKD3_k127_2204493_4 PFAM aminotransferase, class I and II K14155 - 4.4.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009007 300.0
HKD3_k127_2204493_5 Serine threonine protein phosphatase K01090,K20074 - 3.1.3.16 0.00002219 50.0
HKD3_k127_220632_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 536.0
HKD3_k127_220632_1 Histidinol dehydrogenase K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004998 449.0
HKD3_k127_220632_2 DEAD DEAH box helicase K03654 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002976 413.0
HKD3_k127_220632_3 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.000000000000000000000000000000000000000000000000003729 188.0
HKD3_k127_221675_0 E1 component K21416 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 331.0
HKD3_k127_221675_1 COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit K00162,K21417 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000976 308.0
HKD3_k127_221675_2 Glucose dehydrogenase C-terminus K00008 - 1.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000001195 235.0
HKD3_k127_221675_3 Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate K01841 - 5.4.2.9 0.00000000000000000000000000000000000000000000000000000000000001676 228.0
HKD3_k127_221675_4 PFAM short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000005144 211.0
HKD3_k127_2250728_0 PFAM Acetamidase Formamidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 293.0
HKD3_k127_2250728_1 KR domain K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008146 273.0
HKD3_k127_2250728_2 PFAM Periplasmic binding protein LacI transcriptional regulator K10439,K17202 - - 0.00000000000000000000000000000000000007005 148.0
HKD3_k127_2257948_0 Tripartite tricarboxylate transporter TctA family K07793 - - 2.195e-212 670.0
HKD3_k127_2257948_1 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007401 322.0
HKD3_k127_2257948_2 Metallo-beta-lactamase superfamily K06167 - 3.1.4.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 300.0
HKD3_k127_2257948_3 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714,K21062,K22397 - 3.5.4.22,4.1.2.28,4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000335 285.0
HKD3_k127_2257948_4 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006625 281.0
HKD3_k127_2257948_5 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003943 258.0
HKD3_k127_2257948_6 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.000000000000000000000000000000000000000000000000000000000000000000009213 241.0
HKD3_k127_2257948_7 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000001293 237.0
HKD3_k127_2257948_8 Protein of unknown function (DUF3365) - - - 0.0000000000000000000002581 107.0
HKD3_k127_2282332_0 CoA-binding domain protein K01905,K22224 - 6.2.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004682 327.0
HKD3_k127_2282332_1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K05606 - 5.1.99.1 0.0000000000000000000000000006115 123.0
HKD3_k127_2291331_0 PFAM NADPH-dependent FMN reductase - - - 0.00000000000000000000000000000000000000000000000000000000001676 212.0
HKD3_k127_2291331_1 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000003868 173.0
HKD3_k127_2291331_2 ATPases associated with a variety of cellular activities K01996 - - 0.00000000000000000000000000000000003541 137.0
HKD3_k127_2291331_3 PFAM OmpA MotB domain protein K03640 - - 0.000000000000000000000000000000001948 138.0
HKD3_k127_2291331_4 Bacterial DNA-binding protein K03530 - - 0.0000000000000005807 81.0
HKD3_k127_230368_0 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000001009 243.0
HKD3_k127_230368_1 Bacterial transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000006149 206.0
HKD3_k127_230368_2 EamA-like transporter family - - - 0.00000000000000000000000000000000006051 145.0
HKD3_k127_230368_3 redox protein, regulator of disulfide bond formation K07397 - - 0.0000000000000000000000000000000001207 137.0
HKD3_k127_230368_4 PFAM EamA-like transporter family K08978 - - 0.000000004589 64.0
HKD3_k127_2331314_0 Coenzyme A transferase K01026 - 2.8.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002951 611.0
HKD3_k127_2331314_1 MaoC like domain K17865 - 4.2.1.55 0.0000000000000000000000000000000000519 138.0
HKD3_k127_2331314_2 glucose-inhibited division protein A - - - 0.000000000000002187 78.0
HKD3_k127_233842_0 NMT1-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000153 386.0
HKD3_k127_233842_1 regulation of DNA-templated transcription, elongation - - - 0.00000000000000000000000000000000000000000000000000000001448 209.0
HKD3_k127_233842_2 mechanosensitive ion channel - - - 0.000000000000000000000000000000000000007992 147.0
HKD3_k127_233842_3 - - - - 0.00000000000000000000000000000000000004571 158.0
HKD3_k127_2349716_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008885 424.0
HKD3_k127_2349716_1 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003171 446.0
HKD3_k127_2349716_2 phosphotransferase activity, for other substituted phosphate groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008217 312.0
HKD3_k127_2355817_0 Type II secretion system (T2SS), protein F K02455,K02653 GO:0002790,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015628,GO:0015833,GO:0016020,GO:0032940,GO:0033036,GO:0042886,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098776 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 373.0
HKD3_k127_2355817_1 Prokaryotic N-terminal methylation motif K02456 - - 0.0000000000000000000000000000000000000000000000000000000001386 206.0
HKD3_k127_2355817_2 Type II secretion system (T2SS), protein K K02460 - - 0.00000000000000000000000000000000000000000000000000000002274 214.0
HKD3_k127_2355817_3 Prokaryotic N-terminal methylation motif K02458 - - 0.0000000000008189 74.0
HKD3_k127_2355817_4 Fimbrial assembly protein (PilN) K02461 - - 0.000000000002116 79.0
HKD3_k127_2355817_5 general secretion pathway protein K02457 - - 0.0000000001456 70.0
HKD3_k127_2355817_7 Type II secretion system (T2SS), protein M subtype b - - - 0.0000001794 61.0
HKD3_k127_2355817_8 Type II secretion system (T2SS), protein J K02459 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015628,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0098776 - 0.0000003773 60.0
HKD3_k127_2367278_0 PFAM CoA-binding domain protein K01905,K22224 - 6.2.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 341.0
HKD3_k127_2367278_1 PFAM AMP-dependent synthetase and ligase K01904 - 6.2.1.12 0.00000000000000000000000000000000000000000003001 164.0
HKD3_k127_2372299_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003126 523.0
HKD3_k127_2372299_1 Glycosyl transferases group 1 - - - 0.00004269 48.0
HKD3_k127_2405196_0 ABC transporter K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 306.0
HKD3_k127_2405196_1 Branched-chain amino acid ATP-binding cassette transporter K01995,K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004668 300.0
HKD3_k127_2405196_2 Branched-chain amino acid transport system / permease component K01998 - - 0.00000000001989 65.0
HKD3_k127_2421853_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006156 608.0
HKD3_k127_2421853_1 Tripartite tricarboxylate transporter TctA family K07793 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002485 542.0
HKD3_k127_2421853_2 Pyridoxal phosphate biosynthetic protein PdxA K00097 - 1.1.1.262 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009926 307.0
HKD3_k127_2421853_3 Peptidase family M50 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002468 295.0
HKD3_k127_2421853_4 Beta-Casp domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006571 289.0
HKD3_k127_2421853_5 Tripartite tricarboxylate transporter family receptor K07795 - - 0.00000000000000000000000000000000000000000000000000000000000001081 227.0
HKD3_k127_2421853_6 - - - - 0.00000000000000000000000000000000000000000000000000002633 194.0
HKD3_k127_2421853_7 Tripartite tricarboxylate transporter TctB family K07794 - - 0.00000000461 63.0
HKD3_k127_2421855_0 TIGRFAM acetolactate synthase, large subunit, biosynthetic type K01652 - 2.2.1.6 6.195e-250 782.0
HKD3_k127_2421855_1 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 2.806e-211 667.0
HKD3_k127_2421855_10 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.00000000000000000000000000000000000000000000000000000000000465 228.0
HKD3_k127_2421855_11 PFAM Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000003705 131.0
HKD3_k127_2421855_2 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 4.426e-204 646.0
HKD3_k127_2421855_3 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001687 527.0
HKD3_k127_2421855_4 PFAM isocitrate isopropylmalate dehydrogenase K00052 - 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003176 502.0
HKD3_k127_2421855_5 ABC transporter K02013,K05776 - 3.6.3.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004705 415.0
HKD3_k127_2421855_6 Short-chain dehydrogenase reductase sdr K07535 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007165 291.0
HKD3_k127_2421855_7 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005743 288.0
HKD3_k127_2421855_8 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000002065 228.0
HKD3_k127_2421855_9 TIGRFAM acetolactate synthase, small subunit K01653 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000001511 214.0
HKD3_k127_2433028_0 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004304 514.0
HKD3_k127_2433028_1 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002302 385.0
HKD3_k127_2433028_10 PFAM response regulator receiver - - - 0.0000000000000000009852 92.0
HKD3_k127_2433028_11 Sulfite exporter TauE/SafE K07090 - - 0.0000000000000008637 82.0
HKD3_k127_2433028_2 ROK family K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001279 286.0
HKD3_k127_2433028_3 cellulose binding K13735 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003365 259.0
HKD3_k127_2433028_4 Ribose/Galactose Isomerase K01808 - 5.3.1.6 0.00000000000000000000000000000000000000000000000000000000004977 210.0
HKD3_k127_2433028_5 cysteine dioxygenase type I - - - 0.0000000000000000000000000000000000000000000000000000000006313 212.0
HKD3_k127_2433028_6 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.00000000000000000000000000000000000000000000009115 179.0
HKD3_k127_2433028_7 Endonuclease containing a URI domain K07461 - - 0.00000000000000000000000005608 110.0
HKD3_k127_2433028_8 Secretin and TonB N terminus short domain K02666 - - 0.0000000000000000000001561 108.0
HKD3_k127_2433028_9 Cell wall hydrolase autolysin K01448 GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 3.5.1.28 0.000000000000000000001757 109.0
HKD3_k127_2435425_0 PFAM glycosyl transferase, family 35 K00688 - 2.4.1.1 2.801e-291 917.0
HKD3_k127_2435425_1 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003599 328.0
HKD3_k127_2435425_2 PFAM dihydropteroate synthase DHPS K00548 - 2.1.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001316 280.0
HKD3_k127_2435425_3 Domain of unknown function (DUF362) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005889 264.0
HKD3_k127_2441689_0 Tripartite tricarboxylate transporter TctA family K07793 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006537 495.0
HKD3_k127_2441689_1 Hydroxymethylglutaryl-CoA lyase K01640 - 4.1.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006039 346.0
HKD3_k127_2441689_2 Tripartite tricarboxylate transporter family receptor K07795 - - 0.00000000000000000000000000000000000000000000000000004237 201.0
HKD3_k127_2441689_3 Tripartite tricarboxylate transporter TctB family K07794 - - 0.0001547 55.0
HKD3_k127_246351_0 Uncharacterised protein family (UPF0261) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009477 484.0
HKD3_k127_246351_1 Uncharacterised protein family (UPF0261) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000532 461.0
HKD3_k127_246351_10 ABC transporter related K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000302 241.0
HKD3_k127_246351_11 Metal-sensitive transcriptional repressor K21600 - - 0.000000000000001168 80.0
HKD3_k127_246351_12 4Fe-4S dicluster domain - - - 0.00003853 52.0
HKD3_k127_246351_2 Phosphoenolpyruvate hydrolase-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001291 436.0
HKD3_k127_246351_3 PFAM Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738,K19515 - 1.2.7.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002416 392.0
HKD3_k127_246351_4 PFAM Extracellular ligand-binding receptor K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002716 372.0
HKD3_k127_246351_5 Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 306.0
HKD3_k127_246351_6 Pyruvate ferredoxin oxidoreductase beta subunit C terminal K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000217 277.0
HKD3_k127_246351_7 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000345 279.0
HKD3_k127_246351_8 PFAM inner-membrane translocator K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005075 282.0
HKD3_k127_246351_9 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004337 281.0
HKD3_k127_2471621_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 1.058e-286 892.0
HKD3_k127_2471621_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005519 442.0
HKD3_k127_2471621_2 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004477 403.0
HKD3_k127_2471621_3 Bacterial sugar transferase - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 341.0
HKD3_k127_2471621_4 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 309.0
HKD3_k127_2471621_5 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008 - 0.00000000000000000000000000000000000000000000000000000000004504 213.0
HKD3_k127_2471621_6 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.00000000000000000000000000000000000009567 144.0
HKD3_k127_2471621_7 CDP-alcohol phosphatidyltransferase K08744 - 2.7.8.41 0.000000000000000000000000000000000001716 146.0
HKD3_k127_2471621_8 phenylalanyl-tRNA synthetase, beta subunit K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.000000000000000000000000000008465 123.0
HKD3_k127_2471621_9 Ribosomal protein L35 K02916 - - 0.00000000000000001139 87.0
HKD3_k127_2511631_0 Telomere recombination K04656 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009075 551.0
HKD3_k127_2511631_1 hydrogenase expression formation protein HypD K04654 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000151 425.0
HKD3_k127_2511631_10 GYD domain - - - 0.00000000000000000003226 95.0
HKD3_k127_2511631_11 cheY-homologous receiver domain - - - 0.000000000000002895 76.0
HKD3_k127_2511631_12 PFAM Cyclic nucleotide-binding domain - - - 0.000000000000005585 84.0
HKD3_k127_2511631_13 Rubrerythrin - - - 0.0000000001515 71.0
HKD3_k127_2511631_15 cell differentiation - GO:0002244,GO:0002376,GO:0002520,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0005886,GO:0007275,GO:0008022,GO:0008150,GO:0009266,GO:0009605,GO:0009628,GO:0009649,GO:0009987,GO:0010378,GO:0016020,GO:0030097,GO:0030154,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0042752,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0048513,GO:0048534,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050896,GO:0065007,GO:0070013,GO:0071944 - 0.000009598 50.0
HKD3_k127_2511631_2 hydrogenase expression formation protein HypE K04655 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 415.0
HKD3_k127_2511631_3 NUDIX domain K03575 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002163 284.0
HKD3_k127_2511631_4 Rubrerythrin - - - 0.0000000000000000000000000000000000000000000000000000000000000000001882 236.0
HKD3_k127_2511631_5 PFAM GAF domain - - - 0.0000000000000000000000000000000000000000000000000000000000001556 218.0
HKD3_k127_2511631_6 PFAM major facilitator superfamily MFS_1 - - - 0.0000000000000000000000000000000000000000000002181 183.0
HKD3_k127_2511631_7 Protein of unknown function (DUF1178) - - - 0.00000000000000000000000000000000001148 140.0
HKD3_k127_2511631_8 endoribonuclease L-PSP - - - 0.000000000000000000000000005331 115.0
HKD3_k127_2511631_9 Hydrogenase assembly chaperone hypC hupF K04653 - - 0.000000000000000000007998 93.0
HKD3_k127_2522956_0 Nitrite and sulphite reductase 4Fe-4S domain K11180 - 1.8.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004598 582.0
HKD3_k127_2522956_1 TIGRFAM sulfite reductase, dissimilatory-type beta subunit K11181 - 1.8.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009001 567.0
HKD3_k127_2522956_2 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003777 543.0
HKD3_k127_2522956_3 Carbon-nitrogen hydrolase K12251 - 3.5.1.53 0.0000000000000000000000000000000000000000000000000000000000000000000000366 252.0
HKD3_k127_2522956_4 Dissimilatory sulfite reductase - - - 0.000001358 55.0
HKD3_k127_2525438_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009271 279.0
HKD3_k127_2525438_1 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000009382 226.0
HKD3_k127_2525438_2 Bacterial extracellular solute-binding protein, family 7 - - - 0.0000000000000000003326 99.0
HKD3_k127_2525438_3 PFAM Tripartite ATP-independent periplasmic transporter, DctQ component K11689 - - 0.0000000000006159 76.0
HKD3_k127_253620_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 2.92e-256 813.0
HKD3_k127_253620_1 TIGRFAM DNA protecting protein DprA K04096 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003474 362.0
HKD3_k127_253620_2 LysM domain - - - 0.00000000000000009652 91.0
HKD3_k127_2540602_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.0 1151.0
HKD3_k127_2540602_1 Belongs to the ALAD family K01698 - 4.2.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002094 467.0
HKD3_k127_2540602_2 PLD-like domain K06131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003177 435.0
HKD3_k127_2540602_3 Acyl-CoA dehydrogenase, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003502 411.0
HKD3_k127_2540602_4 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 334.0
HKD3_k127_2540602_5 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.00000000000000000000000000000000000000000000000000000001093 207.0
HKD3_k127_2550663_0 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 548.0
HKD3_k127_2550663_1 Lipocalin-like domain - - - 0.00000000000000000000000000000000000000003264 158.0
HKD3_k127_2559408_0 Aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K03520,K20447,K20448 - 1.17.1.5,1.2.5.3 1.568e-208 679.0
HKD3_k127_2559408_1 AAA domain (dynein-related subfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 374.0
HKD3_k127_2559408_2 Probable molybdopterin binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003085 351.0
HKD3_k127_2559408_3 XdhC and CoxI family K07402 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008392 289.0
HKD3_k127_2559408_4 Selenium-dependent molybdenum hydroxylase system protein, YqeB family K07402 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006458 288.0
HKD3_k127_2559408_5 VWA domain containing CoxE-like protein K07161 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006428 283.0
HKD3_k127_2559408_6 CO dehydrogenase flavoprotein domain protein K03519 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000344 227.0
HKD3_k127_2559408_7 aerobic-type carbon monoxide dehydrogenase, small subunit CoxS K03518,K20446 - 1.17.1.5,1.2.5.3 0.00000000000000000000000000000000000000000000004114 173.0
HKD3_k127_2559408_8 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K07141,K19190 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006139,GO:0006725,GO:0006732,GO:0006753,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019538,GO:0019637,GO:0019720,GO:0034641,GO:0034654,GO:0043167,GO:0043169,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0046872,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0061602,GO:0070567,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902759,GO:1902760 1.1.1.328,2.7.7.76 0.00000000000000000000000000000000000000002429 160.0
HKD3_k127_2559408_9 Involved in chromosome partitioning - - - 0.00000000000000000000000000000000000000004714 168.0
HKD3_k127_2580828_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0 1062.0
HKD3_k127_2580828_1 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533,K15396 - 2.1.1.200 0.000000000000000000000000000000000000000000000005685 179.0
HKD3_k127_2580828_2 PFAM major facilitator superfamily MFS_1 - GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944 - 0.000000000000000000000000000000000000000001586 173.0
HKD3_k127_2580828_3 - - - - 0.00000000000000004966 90.0
HKD3_k127_2580828_5 Regulatory protein, FmdB family - - - 0.0001024 46.0
HKD3_k127_2582743_0 PFAM Radical SAM domain protein K22227 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002373 485.0
HKD3_k127_2582743_1 Iron-sulfur cluster-binding domain K22226 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009882 291.0
HKD3_k127_2582743_2 Tim44 - - - 0.0000000000000000000000000000000000001076 146.0
HKD3_k127_2582743_3 Tetratricopeptide repeats - - - 0.00000000000004689 84.0
HKD3_k127_2582743_4 peptidyl-tyrosine sulfation - - - 0.0009477 51.0
HKD3_k127_2591378_0 AMP-binding enzyme C-terminal domain K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002942 574.0
HKD3_k127_2591378_1 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000456 421.0
HKD3_k127_2591378_2 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002122 316.0
HKD3_k127_2591378_3 Belongs to the binding-protein-dependent transport system permease family K01995,K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002322 301.0
HKD3_k127_2591378_4 PFAM ABC transporter K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001218 266.0
HKD3_k127_2591378_5 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005472 268.0
HKD3_k127_2591378_6 Pyruvate ferredoxin/flavodoxin oxidoreductase K00180 - 1.2.7.8 0.00000000000000000000000000000000002521 140.0
HKD3_k127_2591378_7 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 0.000000001974 59.0
HKD3_k127_2613669_0 NADH flavin oxidoreductase NADH oxidase K00219 - 1.3.1.34 3.648e-240 759.0
HKD3_k127_2613669_1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000001375 248.0
HKD3_k127_2613669_2 Transcriptional regulator, Crp Fnr family - - - 0.00000000000000000000000000000000000000004598 160.0
HKD3_k127_2613669_3 SNARE associated Golgi protein - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000005118 134.0
HKD3_k127_2613669_4 Uncharacterised protein family UPF0066 - - - 0.00000000000000000000000000000009247 131.0
HKD3_k127_2613669_5 PFAM nitrogen-fixing NifU domain protein - - - 0.0000000000000000000000003884 108.0
HKD3_k127_2613669_6 indolepyruvate ferredoxin oxidoreductase activity K00179,K05524 - 1.2.7.8 0.00000000000000000001709 92.0
HKD3_k127_2613669_7 Domain of unknown function (DUF1858) - - - 0.0000000000000855 74.0
HKD3_k127_2613669_8 Flavodoxin-like fold - - - 0.00000000239 62.0
HKD3_k127_2613669_9 Rubrerythrin - - - 0.00000004345 61.0
HKD3_k127_2621384_0 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 524.0
HKD3_k127_2621384_1 PFAM Acyl-CoA dehydrogenase N terminal K00248 - 1.3.8.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004054 341.0
HKD3_k127_2621384_2 Belongs to the 'phage' integrase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005828 297.0
HKD3_k127_2621384_3 SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000003834 192.0
HKD3_k127_2621384_4 ATPase histidine kinase DNA gyrase B HSP90 domain protein - - - 0.00000000000745 66.0
HKD3_k127_2622800_0 Two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07712 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 442.0
HKD3_k127_2622800_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001516 258.0
HKD3_k127_26431_0 4Fe-4S ferredoxin iron-sulfur binding domain protein K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0 1159.0
HKD3_k127_26431_1 Heterodisulfide reductase subunit B K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004616 331.0
HKD3_k127_264863_0 TIGRFAM NADH-quinone oxidoreductase, chain G K00336 - 1.6.5.3 5.948e-238 761.0
HKD3_k127_264863_1 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00334,K00335 - 1.6.5.3 9.453e-196 618.0
HKD3_k127_264863_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 601.0
HKD3_k127_264863_3 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000007366 205.0
HKD3_k127_264863_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0050136,GO:0055114,GO:0098796,GO:1902494 1.6.5.3 0.000539 43.0
HKD3_k127_265432_0 Transketolase, pyrimidine binding domain K00162,K00167 - 1.2.4.1,1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003149 451.0
HKD3_k127_265432_1 dehydrogenase, E1 component K00161,K21416 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005088 404.0
HKD3_k127_265432_2 acetyltransferase component of pyruvate dehydrogenase complex K00627 - 2.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000573 405.0
HKD3_k127_265432_3 PFAM Aldehyde dehydrogenase K22187 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004179 269.0
HKD3_k127_2657019_0 Rod shape-determining protein K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000135 532.0
HKD3_k127_2657019_1 Sigma-54 interaction domain K07714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001306 500.0
HKD3_k127_2657019_2 Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na( ) movement across the membrane K15987 - 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005616 325.0
HKD3_k127_2657019_3 Involved in formation and maintenance of cell shape K03570 - - 0.000000000000000000000000000000000000000000000000000002869 201.0
HKD3_k127_2657019_4 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000867 209.0
HKD3_k127_2657019_5 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03770 - 5.2.1.8 0.000000000000000000000000000000000000000000000000001432 192.0
HKD3_k127_2657019_6 acetyltransferase K18815 - 2.3.1.82 0.000000000000000000000000000000002128 134.0
HKD3_k127_2658571_0 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002822 505.0
HKD3_k127_2658571_1 PFAM ATP-binding region, ATPase domain protein - - - 0.00000000000000000000000000000000000000000000000000002361 193.0
HKD3_k127_2658571_2 DRTGG domain - - - 0.00000000000000000000000005325 111.0
HKD3_k127_2658571_3 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.000000000001798 71.0
HKD3_k127_2658571_4 Endoribonuclease that initiates mRNA decay K18682 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.000008878 51.0
HKD3_k127_2660535_0 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000002814 251.0
HKD3_k127_2660535_1 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000001901 243.0
HKD3_k127_2660535_2 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000005545 234.0
HKD3_k127_2660535_3 3-hydroxyanthranilate 3,4-dioxygenase activity - - - 0.00000000000000000000000000000000000000000000001052 173.0
HKD3_k127_2660535_4 ABC transporter K01995 - - 0.000000000000000000000000000443 117.0
HKD3_k127_2665699_0 Protein of unknown function (DUF2786) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006976 378.0
HKD3_k127_2665699_1 PFAM flavin reductase domain protein FMN-binding - - - 0.000000000000000000000000000000000000000000000000004459 186.0
HKD3_k127_2665699_2 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000002661 106.0
HKD3_k127_2669250_0 Psort location CytoplasmicMembrane, score K07793 - - 2.658e-195 620.0
HKD3_k127_2669250_1 Tripartite tricarboxylate transporter TctA family K07793 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009182 515.0
HKD3_k127_2669250_10 Tripartite tricarboxylate transporter TctB family - - - 0.000000000000072 78.0
HKD3_k127_2669250_11 Tripartite tricarboxylate transporter TctB family - - - 0.00001217 53.0
HKD3_k127_2669250_2 PFAM peptidase M24 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004344 437.0
HKD3_k127_2669250_3 Tripartite tricarboxylate transporter TctA family K07793 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000424 397.0
HKD3_k127_2669250_4 amidotransferase, A subunit K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009673 396.0
HKD3_k127_2669250_5 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005958 351.0
HKD3_k127_2669250_6 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009241 304.0
HKD3_k127_2669250_7 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000001414 254.0
HKD3_k127_2669250_8 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000009744 213.0
HKD3_k127_2669250_9 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000926 179.0
HKD3_k127_2669963_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006270,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0034645,GO:0042623,GO:0043138,GO:0043140,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003285 619.0
HKD3_k127_2669963_1 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 558.0
HKD3_k127_2669963_10 Belongs to the glycosyl hydrolase 57 family K22451 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.4.1.25 0.000000000007268 72.0
HKD3_k127_2669963_2 Galactose-1-phosphate uridyl transferase, C-terminal domain K00965 - 2.7.7.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003036 473.0
HKD3_k127_2669963_3 PhoQ Sensor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002252 428.0
HKD3_k127_2669963_4 16S rRNA methyltransferase RsmB/F K03500 - 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008027 377.0
HKD3_k127_2669963_5 PFAM cyclase family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001807 347.0
HKD3_k127_2669963_6 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003976 336.0
HKD3_k127_2669963_7 Pfam:Kce K18013 - 2.3.1.247 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 316.0
HKD3_k127_2669963_8 Ribulose-phosphate 3 epimerase family K01783 - 5.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 299.0
HKD3_k127_2669963_9 Polypeptide deformylase K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000000000000003617 195.0
HKD3_k127_2686669_0 FMN-dependent dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006328 566.0
HKD3_k127_2686669_1 KR domain - - - 0.000000000000000000000000000000000000000000000000000000001959 208.0
HKD3_k127_2686669_2 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.000000000000000000000000000000000000000000009906 168.0
HKD3_k127_2686669_3 SCP-2 sterol transfer family - - - 0.000000000002649 74.0
HKD3_k127_2687606_0 beta-keto acid cleavage enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003313 289.0
HKD3_k127_2687606_1 Cupin domain - - - 0.000000000000000000000000000000001635 134.0
HKD3_k127_2687606_2 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000001075 93.0
HKD3_k127_2687606_3 nucleotidyltransferase activity K07075 - - 0.00000000000003661 76.0
HKD3_k127_2689004_0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K00174 - 1.2.7.11,1.2.7.3 2.218e-213 678.0
HKD3_k127_2689004_1 TIGRFAM pyruvate ferredoxin flavodoxin oxidoreductase, beta subunit K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000006623 106.0
HKD3_k127_2734388_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K07250 - 2.6.1.19,2.6.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 477.0
HKD3_k127_2734388_1 Peptidase dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005818 387.0
HKD3_k127_2734388_2 Carbon-nitrogen hydrolase - - - 0.000000000001617 70.0
HKD3_k127_2762246_0 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus K00441,K21231 - 1.12.98.1,1.3.7.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003588 316.0
HKD3_k127_2762246_1 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 0.00000000000009586 71.0
HKD3_k127_2775214_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600,K00605,K18847 GO:0001505,GO:0003674,GO:0003824,GO:0004047,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005960,GO:0006082,GO:0006520,GO:0006544,GO:0006546,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008483,GO:0009056,GO:0009063,GO:0009069,GO:0009071,GO:0009987,GO:0016054,GO:0016740,GO:0016741,GO:0016769,GO:0017144,GO:0019464,GO:0019752,GO:0032259,GO:0032991,GO:0042133,GO:0042135,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1902494,GO:1990204 2.1.2.1,2.1.2.10,2.2.1.8 0.0 1024.0
HKD3_k127_2775214_1 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008456 464.0
HKD3_k127_2775214_2 CoA-transferase family III K07544 - 2.8.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 338.0
HKD3_k127_2775214_3 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component K04112 - 1.3.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000165 304.0
HKD3_k127_2775214_4 PFAM aminotransferase, class I and II K14155 - 4.4.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007119 289.0
HKD3_k127_2775214_5 Malate/L-lactate dehydrogenase K00073,K13574 - 1.1.1.350 0.0000000000000000000000000000000000000000000000000000000000000000000000008251 259.0
HKD3_k127_2775214_6 nitric oxide reductase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003579 240.0
HKD3_k127_2775214_7 Calcineurin-like phosphoesterase K07098 - - 0.0000000000000000000000000000000000000000000000000000001304 210.0
HKD3_k127_2775214_8 PFAM Methyltransferase type 11 - - - 0.000000000000000000000000000000000000001311 159.0
HKD3_k127_2775214_9 transcriptional regulator containing an HTH domain fused to a Zn-ribbon K07743 - - 0.0000000000000000000007121 98.0
HKD3_k127_2778292_0 PFAM Acetyl-CoA hydrolase transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006308 602.0
HKD3_k127_2778292_1 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002945 596.0
HKD3_k127_2778292_2 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000001617 258.0
HKD3_k127_2778292_3 PFAM Uncharacterised protein family UPF0150 - - - 0.0000000000000000000000000000008587 123.0
HKD3_k127_2778292_4 PFAM YcfA-like - - - 0.00000000000000000001047 93.0
HKD3_k127_2778292_5 2Fe-2S -binding domain K13483 - - 0.00000001004 57.0
HKD3_k127_2778921_0 B12 binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000569 446.0
HKD3_k127_2778921_1 Beta-lactamase superfamily domain K17837 - 3.5.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001295 277.0
HKD3_k127_2778921_2 Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000852 249.0
HKD3_k127_2778921_3 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.00000000000000000000000000000000000000000000000000000000000001901 225.0
HKD3_k127_2778921_4 PFAM Lytic transglycosylase catalytic K08309 - - 0.00000000000000000000000000000000000000000000000000000000005892 230.0
HKD3_k127_2778921_5 Dienelactone hydrolase family - - - 0.000000000000000000000000000005924 120.0
HKD3_k127_2804858_0 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 K03738 - 1.2.7.5 4.014e-196 628.0
HKD3_k127_2804858_1 Belongs to the binding-protein-dependent transport system permease family K01995,K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000247 413.0
HKD3_k127_2804858_2 Receptor family ligand binding region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 363.0
HKD3_k127_2804858_3 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001324 290.0
HKD3_k127_2804858_4 ATPases associated with a variety of cellular activities K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000009633 245.0
HKD3_k127_2804858_5 with the TIM-barrel fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000002951 239.0
HKD3_k127_2804858_6 PFAM Extracellular ligand-binding receptor K01999 - - 0.00000000000000000000000000000000000000000005847 175.0
HKD3_k127_2804858_7 transport system permease K01997 - - 0.00000000000000000000000000000000000000001114 165.0
HKD3_k127_2804858_8 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 K03738 - 1.2.7.5 0.0000000000000000000000000000000001801 135.0
HKD3_k127_2810600_0 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006776 321.0
HKD3_k127_2810600_1 'Cold-shock' DNA-binding domain K03704 - - 0.0000000000000000000000016 103.0
HKD3_k127_2810600_2 PFAM RNP-1 like RNA-binding protein - - - 0.0000000000001514 75.0
HKD3_k127_2810600_3 - - - - 0.00000001096 61.0
HKD3_k127_2851049_0 Molydopterin dinucleotide binding domain K00123 - 1.17.1.9 4.669e-285 897.0
HKD3_k127_2851049_1 tRNA synthetases class I (E and Q), anti-codon binding domain K01886 - 6.1.1.18 2.636e-281 877.0
HKD3_k127_2851049_10 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000007228 198.0
HKD3_k127_2851049_11 O-acyltransferase activity - - - 0.00000000000000000000000000000000005477 134.0
HKD3_k127_2851049_12 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07636 - 2.7.13.3 0.000000000000000000000000000000000191 149.0
HKD3_k127_2851049_13 formate dehydrogenase K00127 - - 0.000000000000000000000000000000175 135.0
HKD3_k127_2851049_14 Necessary for formate dehydrogenase activity K02380 - - 0.0000000000000000000000000004546 124.0
HKD3_k127_2851049_15 cheY-homologous receiver domain K07658 - - 0.00000000000000000000000008619 110.0
HKD3_k127_2851049_16 Methyltransferase domain - - - 0.00000000000000256 85.0
HKD3_k127_2851049_2 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 1.779e-219 692.0
HKD3_k127_2851049_3 Polysaccharide biosynthesis protein - - - 2.475e-199 640.0
HKD3_k127_2851049_4 Belongs to the DegT DnrJ EryC1 family K13010 - 2.6.1.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003419 458.0
HKD3_k127_2851049_5 Histidine kinase HAMP K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003758 311.0
HKD3_k127_2851049_6 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00124 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001151 248.0
HKD3_k127_2851049_7 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000001033 233.0
HKD3_k127_2851049_8 LUD domain - - - 0.00000000000000000000000000000000000000000000000000000000000001014 223.0
HKD3_k127_2851049_9 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 0.000000000000000000000000000000000000000000000000000009413 195.0
HKD3_k127_2872333_0 HpcH/HpaI aldolase/citrate lyase family K02510 - 4.1.2.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 355.0
HKD3_k127_2872333_1 Amidohydrolase family K06015 - 3.5.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001463 311.0
HKD3_k127_2872333_2 Beta-lactamase enzyme family K17836 - 3.5.2.6 0.00000000000000000000000000000000000000000000000000000004883 209.0
HKD3_k127_2874165_0 Fe-S oxidoreductase - - - 7.794e-200 642.0
HKD3_k127_2874165_1 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009448 589.0
HKD3_k127_2874165_2 Belongs to the CarB family K01955 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007522 572.0
HKD3_k127_2874165_3 Mandelate racemase muconate lactonizing enzyme K01781,K20023 - 4.2.1.156,4.2.1.42,5.1.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004616 459.0
HKD3_k127_2874165_4 Electron transfer flavoprotein FAD-binding domain K03522 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007685 393.0
HKD3_k127_2874165_5 Electron transfer flavoprotein domain K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 302.0
HKD3_k127_2874165_6 PFAM regulatory protein TetR K13770 - - 0.0000000000000000000000000000000000000000000000000000000000000000000005264 243.0
HKD3_k127_2874165_7 heat shock protein binding - GO:0003674,GO:0003824,GO:0005488,GO:0005507,GO:0005515,GO:0006790,GO:0008150,GO:0008152,GO:0009058,GO:0009403,GO:0009404,GO:0009987,GO:0016002,GO:0016043,GO:0016491,GO:0016667,GO:0017144,GO:0019748,GO:0020037,GO:0022607,GO:0042802,GO:0043167,GO:0043169,GO:0043933,GO:0044085,GO:0044237,GO:0044249,GO:0044272,GO:0044550,GO:0046872,GO:0046906,GO:0046914,GO:0048037,GO:0051259,GO:0051260,GO:0055114,GO:0065003,GO:0070206,GO:0070207,GO:0070813,GO:0070814,GO:0071840,GO:0097159,GO:1901363,GO:1903136 - 0.000000000000000000000000000000000000000004396 166.0
HKD3_k127_2874165_8 oxidation-reduction process K09022 - 3.5.99.10 0.0000000000000000000000000000000001456 137.0
HKD3_k127_2886322_0 Deacetylase, histone deacetylase acetoin utilization protein K04768 - - 0.000000000000000000000000000000000000000000000000000001915 205.0
HKD3_k127_2886322_1 Domain of unknown function (DUF4126) - - - 0.00000000000000000000000000000000000000000000000000004069 192.0
HKD3_k127_2886322_2 - - - - 0.0005322 49.0
HKD3_k127_2901352_0 PFAM acyl-CoA dehydrogenase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002952 480.0
HKD3_k127_2901352_1 GAF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004322 347.0
HKD3_k127_2901352_2 acyl-CoA dehydrogenase activity K00248,K00249 - 1.3.8.1,1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009896 299.0
HKD3_k127_2901352_3 GlcNAc-PI de-N-acetylase - - - 0.000000000000000000000000000000000000000000000000000000000000005107 225.0
HKD3_k127_2901352_4 Domain of unknown function (DUF374) K09778 - - 0.000000000000000000000000000000000000000000000000000000006304 208.0
HKD3_k127_2901352_5 NUDIX domain - - - 0.0000000000000000000000000000000000000004699 154.0
HKD3_k127_2901352_6 Universal stress protein - - - 0.00000000000000000000000000002464 123.0
HKD3_k127_2901352_7 Uncharacterized ACR, COG1430 K09005 - - 0.00000000000000000000000000005547 123.0
HKD3_k127_2912890_0 COG1593 TRAP-type C4-dicarboxylate transport system, large permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008246 491.0
HKD3_k127_2912890_1 Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 350.0
HKD3_k127_2912890_2 Putative zinc-binding metallo-peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001115 277.0
HKD3_k127_2912890_3 BioY family K03523 - - 0.0000000000000000000000000000000000000000000001687 173.0
HKD3_k127_2912890_4 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000000000000000006134 158.0
HKD3_k127_2912890_5 MaoC like domain K17865 - 4.2.1.55 0.0000000000000000000000000000000000000001296 154.0
HKD3_k127_2912890_6 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000000000000000000003122 129.0
HKD3_k127_2912890_7 - - - - 0.00003046 49.0
HKD3_k127_296519_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07788 - - 0.0 1319.0
HKD3_k127_296519_1 Polysulphide reductase, NrfD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005058 563.0
HKD3_k127_296519_10 ABC transporter related K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002918 253.0
HKD3_k127_296519_11 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 - - 0.0000000000000000000000000000000000000000000000000000000000000001764 223.0
HKD3_k127_296519_12 Menaquinol oxidoreductase complex Cbc4, cytochrome c subunit - - - 0.000000000000000000000000000000000000000000000000000000000007424 211.0
HKD3_k127_296519_13 Aminotransferase class I and II K00639,K00652,K01906 - 2.3.1.29,2.3.1.47,6.2.1.14 0.0000000000000000000000000000000000000000000000000000000001802 217.0
HKD3_k127_296519_14 Bacterial antitoxin of type II TA system, VapB - - - 0.00000000000000000000005779 100.0
HKD3_k127_296519_15 Protein of unknown function (DUF2845) - - - 0.00000000000000005653 87.0
HKD3_k127_296519_16 sequence-specific DNA binding K18830 - - 0.000001483 52.0
HKD3_k127_296519_2 Domains REC, sigma54 interaction, HTH8 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002807 483.0
HKD3_k127_296519_3 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007322 392.0
HKD3_k127_296519_4 PFAM iron-containing alcohol dehydrogenase K00005 - 1.1.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004991 385.0
HKD3_k127_296519_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 365.0
HKD3_k127_296519_6 Branched-chain amino acid transport system / permease component K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002898 282.0
HKD3_k127_296519_7 Histidine kinase HAMP - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001005 293.0
HKD3_k127_296519_8 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001294 276.0
HKD3_k127_296519_9 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001851 271.0
HKD3_k127_2972919_0 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004839 401.0
HKD3_k127_2972919_1 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00362 - 1.7.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005507 346.0
HKD3_k127_2972919_10 - - - - 0.00000000001109 71.0
HKD3_k127_2972919_11 Putative zinc-finger - - - 0.000002573 59.0
HKD3_k127_2972919_2 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004515 340.0
HKD3_k127_2972919_3 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009672 302.0
HKD3_k127_2972919_4 ABC-type sugar transport system periplasmic component K02027 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003119 266.0
HKD3_k127_2972919_5 O-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000003275 230.0
HKD3_k127_2972919_6 galactose-1-phosphate uridylyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000517 229.0
HKD3_k127_2972919_7 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000000000000000000000000001526 216.0
HKD3_k127_2972919_8 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000003182 179.0
HKD3_k127_2972919_9 Binding-protein-dependent transport system inner membrane component K02025 - - 0.000000000001491 72.0
HKD3_k127_3048224_0 Alcohol dehydrogenase GroES-like domain K00055 - 1.1.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008994 309.0
HKD3_k127_3048224_1 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.00000000000000000000000000000000000000000000000521 185.0
HKD3_k127_3048224_2 acetyltransferase - - - 0.0000000000000000000000000000000000000006566 157.0
HKD3_k127_3102110_0 Belongs to the enoyl-CoA hydratase isomerase family K01782,K07516 - 1.1.1.35,4.2.1.17,5.1.2.3 7.127e-260 816.0
HKD3_k127_3102110_1 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007123 398.0
HKD3_k127_3103875_0 Belongs to the thiolase family K00626,K07823 - 2.3.1.174,2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003494 477.0
HKD3_k127_3103875_1 PFAM CoA-binding domain protein K01905,K22224 - 6.2.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 319.0
HKD3_k127_3103875_2 COG1082 Sugar phosphate - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001157 252.0
HKD3_k127_3103875_3 PFAM Trimethylamine methyltransferase (MTTB) K14083 - 2.1.1.250 0.00000000000000000000000000000000000000000000000000001466 206.0
HKD3_k127_3103875_4 TIGRFAM Protein of - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000841 107.0
HKD3_k127_3103875_5 TIGRFAM 4-oxalocrotonate tautomerase family enzyme K01821 - 5.3.2.6 0.000000000000001198 78.0
HKD3_k127_3103875_6 D-isomer specific 2-hydroxyacid dehydrogenase catalytic K00058 - 1.1.1.399,1.1.1.95 0.0001411 45.0
HKD3_k127_3135415_0 Belongs to the amidase family K01426 - 3.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003673 366.0
HKD3_k127_3135415_1 Belongs to the WrbA family K03809 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0055114 1.6.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000918 338.0
HKD3_k127_3135415_2 Phosphorylase superfamily - - - 0.0000000000000000000000000000000000000000000218 170.0
HKD3_k127_3135415_3 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.000000000003158 72.0
HKD3_k127_3135415_4 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.000000000003732 73.0
HKD3_k127_3146632_0 PFAM class II aldolase adducin family protein - - - 7.917e-205 652.0
HKD3_k127_3146632_1 PFAM peptidase M48 Ste24p K06013 - 3.4.24.84 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009857 424.0
HKD3_k127_315846_0 ABC transporter K06020 - 3.6.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005984 549.0
HKD3_k127_315846_1 Domain of unknown function (DUF4143) K07133 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009757 297.0
HKD3_k127_315846_2 Belongs to the UPF0250 family K09158 - - 0.000000000000000000001191 98.0
HKD3_k127_3172061_0 Zinc-binding dehydrogenase K00008,K00060 - 1.1.1.103,1.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 370.0
HKD3_k127_3174660_0 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004443 278.0
HKD3_k127_3174660_1 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000001239 215.0
HKD3_k127_3174660_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.000000000000000000000000000000000000000000002097 168.0
HKD3_k127_3174660_3 Ribosomal protein S5, C-terminal domain K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000008311 164.0
HKD3_k127_3174660_4 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000003036 141.0
HKD3_k127_3174660_5 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.0000000000000000000000008618 104.0
HKD3_k127_3183169_0 Stage II sporulation protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008573 581.0
HKD3_k127_3183169_1 Ecdysteroid kinase K07102 - 2.7.1.221 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004042 437.0
HKD3_k127_3183169_2 Nucleotidyl transferase K00966 - 2.7.7.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003317 346.0
HKD3_k127_3183169_3 TIGRFAM thioredoxin K03672 - 1.8.1.8 0.000000000000000000000000000000000000000006491 160.0
HKD3_k127_3183169_4 Nitroreductase family - - - 0.000000000000000005508 91.0
HKD3_k127_3201203_0 Peptidase family M50 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009041 332.0
HKD3_k127_3201203_1 PFAM Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000954 191.0
HKD3_k127_3201203_2 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000004664 189.0
HKD3_k127_326476_0 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.000000000000000000000000000000000000000000211 170.0
HKD3_k127_326476_1 Glycine-zipper domain - - - 0.0000000000000000000000000000000000009318 145.0
HKD3_k127_326476_2 - - - - 0.00000000000000000000009521 103.0
HKD3_k127_326476_3 RDD family - - - 0.0000000000000000000004468 106.0
HKD3_k127_326476_4 - - - - 0.0000000000000001141 81.0
HKD3_k127_326476_5 - - - - 0.000001984 53.0
HKD3_k127_326476_6 ribosomal protein L11 K02687 - - 0.0002677 46.0
HKD3_k127_3264938_0 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 3.735e-205 647.0
HKD3_k127_3264938_1 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism K00990 - 2.7.7.59 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002378 565.0
HKD3_k127_3264938_2 Ammonium Transporter Family K03320 - - 0.00000000000000000000000000000000000000000000000000000006311 198.0
HKD3_k127_3264938_3 Belongs to the P(II) protein family K04751 - - 0.00000000000000000000000000000000000000000000009261 171.0
HKD3_k127_3264938_4 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses K01916 - 6.3.1.5 0.0000000000000000000000000000002417 127.0
HKD3_k127_3264938_5 response regulator K07712 - - 0.000000006915 62.0
HKD3_k127_3315966_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.0 1290.0
HKD3_k127_3315966_1 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 8.222e-276 872.0
HKD3_k127_3315966_2 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962,K01963 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004451 404.0
HKD3_k127_3315966_3 PFAM ApbE family K09740 - - 0.000000000000000000000000000000000000000000000000000000000000000103 232.0
HKD3_k127_3315966_4 Scavenger mRNA decapping enzyme C-term binding K19710 - 2.7.7.53 0.00000000000000000000000000000000000000000000000005226 184.0
HKD3_k127_3315966_5 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.0000000000000000000000000000000000000004573 154.0
HKD3_k127_3315966_6 PFAM CBS domain containing protein K04767 - - 0.0000000000000000000000000000000000000009563 156.0
HKD3_k127_3390968_0 PFAM short chain dehydrogenase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000007222 266.0
HKD3_k127_3390968_1 PFAM alpha beta hydrolase fold K01055 - 3.1.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000001227 258.0
HKD3_k127_3390968_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0007708 52.0
HKD3_k127_3397006_0 Belongs to the amidase family K01426 - 3.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002277 372.0
HKD3_k127_3397006_1 nucleic acid binding OB-fold tRNA helicase-type K03698 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000863 344.0
HKD3_k127_3397006_2 Dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002306 316.0
HKD3_k127_3397006_3 DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA K05982 - 3.1.21.7 0.000000000000000000000000000000000000000000000000000000000000000000007032 242.0
HKD3_k127_3397006_4 Outer membrane lipoprotein Slp family K07285 - - 0.0000000000000000000000000000000000000000003369 163.0
HKD3_k127_3397006_5 Outer membrane lipoprotein Slp family K07285 - - 0.000000000000000000000000000000000000001053 155.0
HKD3_k127_3397006_6 Putative TM nitroreductase - - - 0.000000000000000000000000000000000009987 144.0
HKD3_k127_3430816_0 Tripartite tricarboxylate transporter TctA family K07793 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005701 551.0
HKD3_k127_3430816_1 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009272 252.0
HKD3_k127_3430816_2 PFAM NADPH-dependent FMN reductase - - - 0.00000000000000000000000000006645 117.0
HKD3_k127_3430816_3 membrane K07794 - - 0.0000000004633 66.0
HKD3_k127_344838_0 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000233 552.0
HKD3_k127_344838_1 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 396.0
HKD3_k127_344838_2 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.0000000000000000000000000000000001416 133.0
HKD3_k127_344838_3 Iron-sulfur cluster-binding domain - - - 0.000000000000000000000000002146 123.0
HKD3_k127_3453104_0 response regulator, receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005097 424.0
HKD3_k127_3453104_1 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000234 316.0
HKD3_k127_3453104_2 PFAM response regulator receiver - - - 0.000000000000000000000000000006198 126.0
HKD3_k127_3453104_3 PFAM response regulator receiver - - - 0.0000000000000000000000005992 119.0
HKD3_k127_3497384_0 PFAM transposase IS4 family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002802 355.0
HKD3_k127_3497384_1 - - - - 0.00000000000000000000000000000000000000000001565 180.0
HKD3_k127_3497384_2 Domain of unknown function (DUF4174) - - - 0.000000000000000000000855 101.0
HKD3_k127_3501102_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 4.781e-228 724.0
HKD3_k127_3501102_1 metalloenzyme domain protein K15635 - 5.4.2.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 496.0
HKD3_k127_3501102_2 Putative pyruvate format-lyase activating enzyme (DUF1786) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004697 357.0
HKD3_k127_3501102_3 Thiamine biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005552 346.0
HKD3_k127_3501102_4 Methyltransferase K06969 - 2.1.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 322.0
HKD3_k127_3501102_5 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000005178 246.0
HKD3_k127_3501102_6 acylphosphatase activity K01512 GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818 3.6.1.7 0.00000000000000000000000002571 110.0
HKD3_k127_3501102_8 PFAM natural resistance-associated macrophage protein K03322 - - 0.00002439 47.0
HKD3_k127_3511367_0 IMP dehydrogenase / GMP reductase domain K00088 - 1.1.1.205 1.642e-223 702.0
HKD3_k127_3511367_1 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002168 423.0
HKD3_k127_352691_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 4.98e-302 940.0
HKD3_k127_352691_1 TRAP-type C4-dicarboxylate transport system, large permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003681 535.0
HKD3_k127_352691_2 Transketolase, pyrimidine binding domain K21417 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003984 413.0
HKD3_k127_352691_3 E1 component K21416 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 349.0
HKD3_k127_352691_4 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004828 295.0
HKD3_k127_352691_5 Iron-containing alcohol dehydrogenase K00001,K13954 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005772 296.0
HKD3_k127_352691_6 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000000000000000000000004388 135.0
HKD3_k127_352691_7 transporter, DctM subunit - - - 0.000000000000000000000009413 104.0
HKD3_k127_3544083_0 ABC transporter K06020 - 3.6.3.25 7.864e-213 667.0
HKD3_k127_3544083_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885,K09698 - 6.1.1.17,6.1.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002975 477.0
HKD3_k127_3544083_2 pfkB family carbohydrate kinase K03272 - 2.7.1.167,2.7.7.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 329.0
HKD3_k127_3544083_3 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000003829 254.0
HKD3_k127_3544083_4 PFAM YicC-like family, N-terminal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003935 247.0
HKD3_k127_3544083_5 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 - 2.7.7.60 0.0000000000000000000000000000000000000000000000000000000001004 214.0
HKD3_k127_3544083_6 Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl- D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2- phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4- cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF) K01770,K12506 - 2.7.7.60,4.6.1.12 0.0000000000000000000000000000000000000000000000000000000003529 207.0
HKD3_k127_3544083_7 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.0000000000000000000000000000000000000000000000000000000004431 208.0
HKD3_k127_3544083_8 Domain of unknown function (DUF4416) - - - 0.00000000000000000000000000000000000000000000000001518 185.0
HKD3_k127_3544083_9 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.000000000000002603 78.0
HKD3_k127_3544308_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 1.689e-211 672.0
HKD3_k127_3544308_1 N-terminal half of MaoC dehydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006984 245.0
HKD3_k127_3544308_2 PFAM response regulator receiver K02481,K07712 - - 0.00000000000000000000001569 105.0
HKD3_k127_356521_0 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004188 291.0
HKD3_k127_356521_1 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000002477 247.0
HKD3_k127_356521_2 PFAM Branched-chain amino acid transport system permease component K01997,K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000005095 238.0
HKD3_k127_3623415_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 1.929e-232 739.0
HKD3_k127_3623415_1 Domain of unknown function (DUF2088) - - - 4.415e-196 619.0
HKD3_k127_3623415_2 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004115 547.0
HKD3_k127_3623415_3 Haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000001644 164.0
HKD3_k127_3623415_4 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000001088 117.0
HKD3_k127_3623415_5 tetratricopeptide repeat - - - 0.00000000000000395 83.0
HKD3_k127_3631131_0 7TM-HD extracellular K07037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000254 477.0
HKD3_k127_3631131_1 AAA domain K06217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002959 428.0
HKD3_k127_3631131_2 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.000000000000000000001043 102.0
HKD3_k127_3631131_3 helix_turn_helix, arabinose operon control protein - - - 0.0002488 47.0
HKD3_k127_364187_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1013.0
HKD3_k127_364187_1 PFAM Major Facilitator Superfamily K08177 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008394 317.0
HKD3_k127_364187_2 COGs COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K07713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000039 308.0
HKD3_k127_364187_3 phosphorelay signal transduction system K07713 - - 0.00000000000000000000000000000000005787 140.0
HKD3_k127_3717465_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 616.0
HKD3_k127_3717465_1 AIR synthase related protein domain protein K01933 - 6.3.3.1 0.000000000000000000000000000000000000000001083 162.0
HKD3_k127_3723457_0 peptidase S16 K01338,K04076,K04770 - 3.4.21.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 526.0
HKD3_k127_3727291_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 1.027e-222 705.0
HKD3_k127_3727291_1 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 GO:0003674,GO:0003824,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003535 364.0
HKD3_k127_3727291_2 Peptidase family S49 K04773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006105 293.0
HKD3_k127_3727291_3 cytidylate kinase activity K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.0000000000000000000000000000000000000000000000000000000000000002031 228.0
HKD3_k127_3727291_4 methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000007481 223.0
HKD3_k127_3727291_5 PFAM Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000005763 201.0
HKD3_k127_3736965_0 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003316 610.0
HKD3_k127_3736965_1 Helix-hairpin-helix domain - - - 0.00000000000000000000000000000000000002 151.0
HKD3_k127_3736965_2 PFAM CHAD domain containing protein - - - 0.000000000000000000000000000002135 124.0
HKD3_k127_3736965_3 Cytochrome c3 - - - 0.000002897 49.0
HKD3_k127_3744104_0 Sigma-54 interaction domain K07714,K07715 - - 1.047e-204 646.0
HKD3_k127_3744104_1 endopeptidase activity - - - 0.00000000000000000000000000000000000000000000004543 176.0
HKD3_k127_3744104_2 PFAM DSBA oxidoreductase - - - 0.00000000000000000004973 100.0
HKD3_k127_3744104_3 nuclear chromosome segregation - - - 0.0000002116 58.0
HKD3_k127_3745599_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1232.0
HKD3_k127_3745599_1 methionine synthase K00548 - 2.1.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003764 278.0
HKD3_k127_3745599_10 - - - - 0.00000000000001113 78.0
HKD3_k127_3745599_2 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009826 276.0
HKD3_k127_3745599_3 Allophanate hydrolase subunit 2 K06350 - - 0.000000000000000000000000000000000000000000000000000000000000000009925 233.0
HKD3_k127_3745599_4 Belongs to the short-chain dehydrogenases reductases (SDR) family K03366 - 1.1.1.304,1.1.1.76 0.000000000000000000000000000000000000000000000000000000001544 209.0
HKD3_k127_3745599_5 Conserved hypothetical protein 698 - - - 0.00000000000000000000000000000000000000000000000000001591 194.0
HKD3_k127_3745599_6 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.00000000000000000000000000000000000000000481 160.0
HKD3_k127_3745599_7 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000000000000000000000000000000002192 148.0
HKD3_k127_3745599_8 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000001378 117.0
HKD3_k127_3745599_9 YhhN family - - - 0.0000000000000000000000000003122 123.0
HKD3_k127_3755671_0 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K01531 - 3.6.3.2 0.0 1118.0
HKD3_k127_3755671_1 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009235 545.0
HKD3_k127_3755671_10 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454,K02652 - - 0.0000000009116 68.0
HKD3_k127_3755671_2 fumarylacetoacetate (FAA) hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001596 284.0
HKD3_k127_3755671_3 COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III K00784 - 3.1.26.11 0.000000000000000000000000000000000000000000000000000000000000000000000000001092 263.0
HKD3_k127_3755671_4 PFAM Histone deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000008046 212.0
HKD3_k127_3755671_5 hydrolase activity - - - 0.0000000000000000000000000000000000000000000000000000000002986 214.0
HKD3_k127_3755671_6 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000000002041 180.0
HKD3_k127_3755671_7 Rhodanese Homology Domain - - - 0.000000000000000000000006778 102.0
HKD3_k127_3755671_8 Universal stress protein family - - - 0.0000000000005362 80.0
HKD3_k127_3755671_9 Belongs to the universal stress protein A family - - - 0.000000000563 70.0
HKD3_k127_3756203_0 Allophanate hydrolase subunit 2 K06350 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005101 292.0
HKD3_k127_3756203_1 Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK) K02548 - 2.5.1.74 0.00000000000000000000000000000000000000000000000000000000000000000007265 242.0
HKD3_k127_3756203_2 Enoyl-(Acyl carrier protein) reductase K00065 - 1.1.1.127 0.000000000000000000000000000000000000000000000000000000000000000003191 234.0
HKD3_k127_3756203_3 Allophanate hydrolase subunit 1 K06351 - - 0.00000000000000000000000000000000000000000000000000000001338 206.0
HKD3_k127_3756203_4 Domain of unknown function (DUF2437) - - - 0.00000000000000000000000000000000000000000000004521 182.0
HKD3_k127_3756203_5 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000001561 179.0
HKD3_k127_3756203_6 CAAX protease self-immunity K07052 - - 0.0000000000000000000000000000000000000005775 159.0
HKD3_k127_3756203_7 YhhN family - - - 0.00000000000000000000000000588 119.0
HKD3_k127_3756203_8 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000001469 106.0
HKD3_k127_3760079_0 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000667 600.0
HKD3_k127_3760079_1 metal ion transmembrane transporter activity K03322 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006031 508.0
HKD3_k127_3760079_2 Domain of unknown function (DUF4922) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 369.0
HKD3_k127_3760079_3 Endoribonuclease L-PSP - - - 0.00002656 46.0
HKD3_k127_379395_0 Belongs to the 3-oxoacid CoA-transferase family K01026 - 2.8.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005688 555.0
HKD3_k127_379395_1 Acyl-CoA dehydrogenase, middle domain K18244 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 402.0
HKD3_k127_379395_2 electron transfer flavoprotein, alpha subunit K03522,K22432 - 1.3.1.108 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001569 349.0
HKD3_k127_379395_3 electron transfer flavoprotein K03521 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002987 249.0
HKD3_k127_379395_4 MaoC like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000004228 223.0
HKD3_k127_379395_5 SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000000000005371 211.0
HKD3_k127_379395_6 Bacterial transcriptional repressor C-terminal K16137 - - 0.000000000000000000000000000000000000000000000000000000005701 205.0
HKD3_k127_379395_7 Protein of unknown function (DUF401) K09133 - - 0.00000000000000000000000000000000000000000000000000000107 208.0
HKD3_k127_379395_8 zinc ion binding K07048 GO:0008150,GO:0009888,GO:0009987,GO:0030154,GO:0030855,GO:0032502,GO:0048856,GO:0048869,GO:0060429 - 0.00000000000000000000000000000000000002884 149.0
HKD3_k127_379395_9 SNARE associated Golgi protein - - - 0.00006612 46.0
HKD3_k127_379536_0 D-galactarate dehydratase altronate hydrolase K16850 - 4.2.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005883 369.0
HKD3_k127_379536_1 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000007644 248.0
HKD3_k127_3800059_0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K07516 - 1.1.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003033 578.0
HKD3_k127_3800059_1 PFAM regulatory protein, MarR - - - 0.000007952 49.0
HKD3_k127_3826930_0 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006042 338.0
HKD3_k127_3826930_1 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.00000000000000000000000000000000000000000000003148 175.0
HKD3_k127_3826930_2 PFAM Rubrerythrin - - - 0.0000001598 52.0
HKD3_k127_3829943_0 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 1.756e-208 658.0
HKD3_k127_3829943_1 Saccharopine dehydrogenase K00290 - 1.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002686 512.0
HKD3_k127_3829943_2 WG containing repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000177 292.0
HKD3_k127_3829943_3 Mediates influx of magnesium ions K03284 - - 0.0000000000000007308 77.0
HKD3_k127_383076_0 Belongs to the peptidase M16 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002356 503.0
HKD3_k127_383076_1 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001964 399.0
HKD3_k127_383076_2 PFAM Peptidase M16 inactive domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004903 388.0
HKD3_k127_383076_3 Transposase IS200 like - - - 0.0000000000000000000000000000000000000000000000000000000000958 209.0
HKD3_k127_383076_4 Integral membrane protein CcmA involved in cell shape determination - - - 0.0000000007859 65.0
HKD3_k127_383076_5 Transposase IS200 like - - - 0.00000002045 55.0
HKD3_k127_3841420_0 Thiolase, C-terminal domain K00626 - 2.3.1.9 4.483e-201 632.0
HKD3_k127_3841420_1 Short chain fatty acid transporter K02106 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004981 478.0
HKD3_k127_3841420_2 CoA-transferase activity K01039 - 2.8.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 428.0
HKD3_k127_3841420_3 Coenzyme A transferase K01040 - 2.8.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002766 364.0
HKD3_k127_3841420_4 Acyl-CoA synthetase (NDP forming) K01905,K18594,K22224 - 6.2.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001965 320.0
HKD3_k127_3841420_5 Glucuronate isomerase K01812 - 5.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001493 293.0
HKD3_k127_3841420_6 - - - - 0.000000000000000000000000000000000000000000000000001513 194.0
HKD3_k127_3841420_7 Rubredoxin-like zinc ribbon domain (DUF35_N) K07068 - - 0.000000000000000000000000000000000000000000003763 169.0
HKD3_k127_3842799_0 PFAM D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000001583 199.0
HKD3_k127_3842799_1 Formiminotransferase-cyclodeaminase - - - 0.00000000000000000000000172 111.0
HKD3_k127_3842799_2 Domain of unknown function (DUF2088) - - - 0.0000000000003683 70.0
HKD3_k127_3850097_0 Aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K11177 - 1.17.1.4 3.761e-248 780.0
HKD3_k127_3850097_1 acetyl-CoA K18122 - - 0.0000000000000000000000000003196 117.0
HKD3_k127_3866112_0 Domain of unknown function (DUF4139) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002796 522.0
HKD3_k127_3866112_1 virion core protein (lumpy skin disease virus) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002319 401.0
HKD3_k127_3866112_10 - - - - 0.000000000000002193 82.0
HKD3_k127_3866112_11 VanZ like family - - - 0.00004878 52.0
HKD3_k127_3866112_2 PFAM ABC transporter K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001897 306.0
HKD3_k127_3866112_3 Protein of unknown function (DUF3047) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002948 286.0
HKD3_k127_3866112_4 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008528 277.0
HKD3_k127_3866112_5 Branched-chain amino acid transport system / permease component K01997,K01998 - - 0.00000000000000000000000000000000000000000000000000000000002071 213.0
HKD3_k127_3866112_6 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000647 166.0
HKD3_k127_3866112_7 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.00000000000000000000000001189 113.0
HKD3_k127_3866112_8 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000003578 109.0
HKD3_k127_3866112_9 Psort location Cytoplasmic, score - - - 0.000000000000000001569 97.0
HKD3_k127_3872066_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004219 552.0
HKD3_k127_3872066_1 PSP1 C-terminal conserved region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005373 296.0
HKD3_k127_3872066_2 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02341 - 2.7.7.7 0.0000003499 57.0
HKD3_k127_3887774_0 pfam abc-1 K03688 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003702 614.0
HKD3_k127_3887774_1 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000716 388.0
HKD3_k127_3887774_2 Uroporphyrinogen decarboxylase (URO-D) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000107 288.0
HKD3_k127_3887774_3 PFAM Homoserine dehydrogenase K00003 - 1.1.1.3 0.000000000000000000000000000000000000000000000001257 179.0
HKD3_k127_3887774_4 - - - - 0.0000000000004018 73.0
HKD3_k127_3902290_0 PFAM 2Fe-2S iron-sulfur cluster binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008915 561.0
HKD3_k127_3902290_1 TIGRFAM conserved - - - 0.000000000000001725 78.0
HKD3_k127_390792_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007446 558.0
HKD3_k127_390792_1 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006524 401.0
HKD3_k127_390792_2 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005373 297.0
HKD3_k127_390792_3 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000002882 170.0
HKD3_k127_390792_4 Belongs to the UPF0109 family K06960 - - 0.000000000000000000000000000000007199 129.0
HKD3_k127_390792_5 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.000000000000000000000000001667 121.0
HKD3_k127_390792_6 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.000000000000000000000000007592 111.0
HKD3_k127_390792_7 Periplasmic binding protein domain K01999 - - 0.00000000000003921 85.0
HKD3_k127_3911169_0 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002536 459.0
HKD3_k127_3911169_1 beta-keto acid cleavage enzyme K18013 - 2.3.1.247 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002437 353.0
HKD3_k127_3911169_2 PFAM Cysteine-rich domain K11473 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003547 335.0
HKD3_k127_3911169_3 Cupin domain - - - 0.0000000000000000000000000000000001682 140.0
HKD3_k127_3917203_0 PFAM CoA-binding domain protein K01905,K22224 - 6.2.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007384 300.0
HKD3_k127_3917203_1 TIGRFAM 4-oxalocrotonate tautomerase family enzyme K01821 - 5.3.2.6 0.000000000000007556 78.0
HKD3_k127_3917203_2 TIGRFAM Protein of - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000002988 70.0
HKD3_k127_3921378_0 4Fe-4S binding domain K02572 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003191 345.0
HKD3_k127_3921378_1 Domain of unknown function (DUF362) - - - 0.000000000000000000000000000000000000000000000000000000000000000000009304 245.0
HKD3_k127_3921378_2 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.000000000000000000001394 96.0
HKD3_k127_3921378_3 Histidine kinase - - - 0.0005763 44.0
HKD3_k127_3926205_0 Bacterial extracellular solute-binding protein, family 7 K21395 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002042 272.0
HKD3_k127_3926205_1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001518 266.0
HKD3_k127_3926205_2 aerobic-type carbon monoxide dehydrogenase, small subunit CoxS K03518,K13483 - 1.2.5.3 0.000000000000000000000000000000000000000000000000006893 184.0
HKD3_k127_3926205_3 Archaeal transcriptional regulator TrmB - - - 0.0000000000000000000000000000000000000000000006712 177.0
HKD3_k127_3926205_4 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00004522 49.0
HKD3_k127_3928523_0 UDP-N-acetylmuramate-L-alanine ligase activity K01924 - 6.3.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007469 609.0
HKD3_k127_3928523_1 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009213 574.0
HKD3_k127_3928523_10 Cell cycle protein K03588 - - 0.000000000000000000255 90.0
HKD3_k127_3928523_11 AraC-like ligand binding domain - - - 0.0000271 53.0
HKD3_k127_3928523_2 PFAM Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002208 508.0
HKD3_k127_3928523_3 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009169 463.0
HKD3_k127_3928523_4 Cell wall formation K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009723 355.0
HKD3_k127_3928523_5 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 353.0
HKD3_k127_3928523_6 Cell wall formation K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000002 252.0
HKD3_k127_3928523_7 Essential cell division protein K03589 - - 0.00000000000000000000000000000000002879 145.0
HKD3_k127_3928523_8 lactoylglutathione lyase activity K01759,K08234,K20431 - 4.4.1.5,5.1.3.33 0.000000000000000000000000000306 124.0
HKD3_k127_3928523_9 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000005984 95.0
HKD3_k127_3935911_0 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001313 377.0
HKD3_k127_3935911_1 PDZ domain (Also known as DHR or GLGF) K11749 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 345.0
HKD3_k127_3935911_2 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003665 306.0
HKD3_k127_3935911_3 Glycoprotease family K01409,K14742 GO:0002949,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140096,GO:1901360,GO:1901564 2.3.1.234 0.00000000000000000000000000000000000000000000000000000005919 203.0
HKD3_k127_3935911_4 extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000001395 183.0
HKD3_k127_3935911_5 peroxiredoxin activity K01607 - 4.1.1.44 0.0000000000000000000000000000000000000001497 152.0
HKD3_k127_3935911_6 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000002025 65.0
HKD3_k127_3935911_7 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K18983 - 5.5.1.27 0.000000007852 57.0
HKD3_k127_3935927_0 4Fe-4S ferredoxin iron-sulfur binding domain protein K18501 - - 1.044e-225 710.0
HKD3_k127_3935927_1 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006445 416.0
HKD3_k127_3935927_2 Nitrate reductase gamma subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000001611 240.0
HKD3_k127_3935927_3 PFAM Polysulphide reductase, NrfD K00185 - - 0.000000000000000000000000000000000000000000000000005612 183.0
HKD3_k127_3935927_4 nitrate reductase activity - - - 0.000000000000000000000000000000000000000001416 165.0
HKD3_k127_3935927_5 DsrC like protein K11179 - - 0.000000000000000000000000000000000005823 139.0
HKD3_k127_3935927_6 PFAM Appr-1-p processing domain protein - - - 0.00000000000000000000000001761 116.0
HKD3_k127_3935927_7 Transcriptional regulator - - - 0.0000000000000000000001067 103.0
HKD3_k127_3966487_0 mannitol 2-dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009464 348.0
HKD3_k127_3966487_1 6-phosphogluconate dehydrogenase NAD-binding - - - 0.00000000000000007525 85.0
HKD3_k127_3996732_0 mannitol 2-dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005619 358.0
HKD3_k127_3996732_1 CO dehydrogenase flavoprotein domain protein K03519 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000414 284.0
HKD3_k127_3996732_2 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000007948 193.0
HKD3_k127_3996732_3 TRAP-type C4-dicarboxylate transport system small permease component K11689 - - 0.00000000000000000000006869 104.0
HKD3_k127_3996732_4 Molybdopterin-binding domain of aldehyde dehydrogenase - - - 0.000000000000000006096 84.0
HKD3_k127_40038_0 PFAM AMP-dependent synthetase and ligase K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004739 450.0
HKD3_k127_40038_1 PFAM ABC transporter K01996 - - 0.00000000000000000000000000000000000000000000001629 171.0
HKD3_k127_40038_2 Domain in cystathionine beta-synthase and other proteins. K04767 - - 0.0000000000000000000000000000000000000000001345 168.0
HKD3_k127_40038_3 FCD K13654 GO:0003674,GO:0003700,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000000000000000000005172 124.0
HKD3_k127_40038_4 AMP binding - - - 0.00000000000000000000000005901 112.0
HKD3_k127_40038_5 CoA binding domain K01905 - 6.2.1.13 0.0001765 46.0
HKD3_k127_4010506_0 oligopeptide dipeptide ABC transporter K02031 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005312 350.0
HKD3_k127_4010506_1 Belongs to the ABC transporter superfamily K02032,K10823 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 356.0
HKD3_k127_4010506_2 Binding-protein-dependent transport system inner membrane component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001754 337.0
HKD3_k127_4010506_3 Protein of unknown function (DUF917) K09703 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001925 322.0
HKD3_k127_4010506_4 Binding-protein-dependent transport system inner membrane component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001928 297.0
HKD3_k127_4010506_5 ABC transporter substrate-binding protein K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001427 290.0
HKD3_k127_4010506_6 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003279 281.0
HKD3_k127_4010506_7 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000838 267.0
HKD3_k127_4010506_8 cell differentiation - GO:0002244,GO:0002376,GO:0002520,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0005886,GO:0007275,GO:0008022,GO:0008150,GO:0009266,GO:0009605,GO:0009628,GO:0009649,GO:0009987,GO:0010378,GO:0016020,GO:0030097,GO:0030154,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0042752,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0048513,GO:0048534,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050896,GO:0065007,GO:0070013,GO:0071944 - 0.00004342 47.0
HKD3_k127_40116_0 Type II/IV secretion system protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002433 498.0
HKD3_k127_40116_1 COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003002 470.0
HKD3_k127_40116_10 Protein of unknown function (DUF4230) - - - 0.000000000000000000000000000000000000000000000002962 182.0
HKD3_k127_40116_11 Protein of unknown function (DUF456) - - - 0.00000000000000000000000000000000007136 138.0
HKD3_k127_40116_12 - - - - 0.000001493 56.0
HKD3_k127_40116_2 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 442.0
HKD3_k127_40116_3 COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related deacylases K06016 - 3.5.1.6,3.5.1.87 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001846 385.0
HKD3_k127_40116_4 peptidase dimerisation domain protein K01439 - 3.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002993 321.0
HKD3_k127_40116_5 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001411 287.0
HKD3_k127_40116_6 Peptidase family M28 K06016 - 3.5.1.6,3.5.1.87 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000073 287.0
HKD3_k127_40116_7 zinc ion binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006175 269.0
HKD3_k127_40116_8 Cytidylate kinase-like family - - - 0.00000000000000000000000000000000000000000000000000000000000006788 225.0
HKD3_k127_40116_9 SMART AAA ATPase - - - 0.00000000000000000000000000000000000000000000000006904 198.0
HKD3_k127_4022961_0 - - - - 0.000000000000000000000000000000000000001723 149.0
HKD3_k127_4022961_1 DinB family - - - 0.000000000000000000000000001107 124.0
HKD3_k127_4022961_2 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol - - - 0.00000000000000000000000001576 112.0
HKD3_k127_4026042_0 TIGRFAM RND efflux system, outer membrane lipoprotein, NodT - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008367 318.0
HKD3_k127_4026042_1 methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003163 312.0
HKD3_k127_4026042_2 PFAM UspA domain protein - - - 0.000000000000000000005789 99.0
HKD3_k127_4026042_3 Divergent 4Fe-4S mono-cluster K05337 - - 0.000000000000000000009795 94.0
HKD3_k127_4028844_0 pyruvate flavodoxin ferredoxin oxidoreductase K00169,K19070 GO:0003674,GO:0003824,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016054,GO:0016491,GO:0016625,GO:0016903,GO:0019752,GO:0033609,GO:0033611,GO:0043436,GO:0043648,GO:0043649,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0071704,GO:1901575 1.2.7.1,1.2.7.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007308 535.0
HKD3_k127_4028844_1 Threonine synthase K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 490.0
HKD3_k127_4028844_2 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00170 - 1.2.7.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003502 406.0
HKD3_k127_4028844_3 oxidoreductase gamma subunit K00172 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000006469 238.0
HKD3_k127_4028844_4 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III - - - 0.00000000000000000000000000000000000000000000000000000000000000009035 237.0
HKD3_k127_4028844_5 4Fe-4S dicluster domain K00171 - 1.2.7.1 0.000000000000000000000000002963 113.0
HKD3_k127_4035721_0 PFAM ATP-binding region ATPase domain protein K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000001037 245.0
HKD3_k127_4035721_1 Single cache domain 3 K03406,K13487 - - 0.0000000000000000000000000000000000000000000000000000002139 222.0
HKD3_k127_4035721_2 Transcriptional regulator K07658 - - 0.0000000000000000002604 92.0
HKD3_k127_4056711_0 PFAM CBS domain K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006178 341.0
HKD3_k127_4056711_1 Transporter associated domain - - - 0.0000000000000000000000000000000000000000000000000000000001061 220.0
HKD3_k127_4056711_2 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0000000000000000000000000000000005088 134.0
HKD3_k127_4056711_3 AIR carboxylase K06898 - - 0.000000000000000001343 87.0
HKD3_k127_4067418_0 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006735 403.0
HKD3_k127_4067418_1 Radical SAM superfamily K06937 - - 0.00000000000000000000000000007381 120.0
HKD3_k127_4072859_0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008394 374.0
HKD3_k127_4072859_1 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007073 309.0
HKD3_k127_4072859_2 - - - - 0.000000006103 63.0
HKD3_k127_4093090_0 Extracellular solute-binding protein, family 5 K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002008 407.0
HKD3_k127_4093090_1 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002735 260.0
HKD3_k127_4113332_0 PFAM ABC transporter K02013 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 368.0
HKD3_k127_4113332_1 TonB-dependent Receptor Plug K02014,K16089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002956 340.0
HKD3_k127_4113332_2 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.000000000000000000000000000000000000000000007036 165.0
HKD3_k127_4135347_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823 - 2.6.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003547 456.0
HKD3_k127_4135347_1 Insulinase (Peptidase family M16) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008846 434.0
HKD3_k127_4135347_10 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686,K05516 - - 0.00000000108 63.0
HKD3_k127_4135347_11 Tripartite tricarboxylate transporter TctB family - - - 0.0000007086 54.0
HKD3_k127_4135347_2 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004082 377.0
HKD3_k127_4135347_3 FMN-dependent alpha-hydroxy acid dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008301 377.0
HKD3_k127_4135347_4 Tripartite tricarboxylate transporter TctA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004732 331.0
HKD3_k127_4135347_5 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001243 284.0
HKD3_k127_4135347_6 Peptidase M16 inactive domain K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002939 291.0
HKD3_k127_4135347_7 PFAM Phosphoglycerate mutase K02226 - 3.1.3.73 0.0000000000000000000000000000000000000000000000000000825 193.0
HKD3_k127_4135347_8 COGs COG0589 Universal stress protein UspA and related nucleotide-binding protein - - - 0.000000000000000000008757 97.0
HKD3_k127_4135347_9 Virulence factor BrkB K07058 - - 0.0000000000000000006501 98.0
HKD3_k127_4147662_0 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002513 343.0
HKD3_k127_4147662_1 TIGRFAM alpha-L-glutamate ligase-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 320.0
HKD3_k127_4147662_2 YdjC-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000001156 231.0
HKD3_k127_4147662_3 7 transmembrane helices usually fused to an inactive transglutaminase - - - 0.0000000000000000000000000000000000000000000000000000000003492 224.0
HKD3_k127_4147662_5 TrkA-N domain K03499 - - 0.000000000000000000000000000000000000133 143.0
HKD3_k127_4147662_6 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000005652 118.0
HKD3_k127_4147662_7 Putative ATP-dependant zinc protease - - - 0.000000000000000000001936 100.0
HKD3_k127_416314_0 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000003024 226.0
HKD3_k127_416314_1 nUDIX hydrolase - - - 0.00000000000000000000000000000000000000000000003234 180.0
HKD3_k127_416314_2 Belongs to the UPF0102 family K07460 - - 0.0000000000000000000000000000000054 133.0
HKD3_k127_416314_3 PFAM Branched-chain amino acid transport system permease component K01997 - - 0.000000000000000000000000000114 117.0
HKD3_k127_416314_4 Cupin 2, conserved barrel domain protein - - - 0.00005738 49.0
HKD3_k127_4175420_0 PFAM L-carnitine dehydratase bile acid-inducible protein F - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 402.0
HKD3_k127_4175420_1 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003309 304.0
HKD3_k127_4175420_2 PFAM ABC transporter related K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001499 255.0
HKD3_k127_4175420_3 PFAM ABC transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000009551 238.0
HKD3_k127_4175420_4 Branched-chain amino acid transport system, permease component K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000004564 233.0
HKD3_k127_4175420_5 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.000000000000000000000000000000000000000000000000000000000000007567 232.0
HKD3_k127_4183098_0 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 1.178e-242 765.0
HKD3_k127_4183098_1 D-galactarate dehydratase / Altronate hydrolase, C terminus K16850 - 4.2.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001835 377.0
HKD3_k127_4183098_2 Coenzyme F420 hydrogenase dehydrogenase, beta subunit C terminus K00441 - 1.12.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000003083 263.0
HKD3_k127_4183098_3 indolepyruvate ferredoxin oxidoreductase, beta subunit K00180 - 1.2.7.8 0.000000000000000000000000000000000000000000000000000000000000001158 225.0
HKD3_k127_4183098_4 D-galactarate dehydratase / Altronate hydrolase, C terminus K01685 - 4.2.1.7 0.000000000000000002559 87.0
HKD3_k127_4184398_0 Hydantoinaseoxoprolinase domain protein K01469,K01473 - 3.5.2.14,3.5.2.9 3.193e-224 715.0
HKD3_k127_4184398_1 PFAM Hydantoinase B oxoprolinase K01469,K01474 - 3.5.2.14,3.5.2.9 1.601e-199 638.0
HKD3_k127_4191487_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001537 579.0
HKD3_k127_4191487_1 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K00666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002021 474.0
HKD3_k127_4191487_2 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 385.0
HKD3_k127_4191487_3 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 372.0
HKD3_k127_4191487_4 Short chain fatty acid transporter K02106 - - 0.00000000000000000000000000000000000000000000000000000000001834 223.0
HKD3_k127_4195766_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007496 304.0
HKD3_k127_4195766_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000002711 275.0
HKD3_k127_4202162_0 PFAM Iron-containing alcohol dehydrogenase K00001,K19954 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 374.0
HKD3_k127_4202162_1 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses K01916 - 6.3.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000001661 255.0
HKD3_k127_4223511_0 tRNA nucleotidyltransferase poly(A) polymerase K00974 - 2.7.7.72 5.085e-287 907.0
HKD3_k127_4223511_1 TIGRFAM tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007675 458.0
HKD3_k127_4223511_2 Tyrosine recombinase XerD K03733,K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006988 311.0
HKD3_k127_4223511_3 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.000000000000000000000000000000000000000000000000000000000000000000002855 243.0
HKD3_k127_4223511_4 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.000000000000000000000000000000000000000000000000000000000000000013 230.0
HKD3_k127_4223511_5 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.0000000000000000000000000000000000000000000000000000000000002365 220.0
HKD3_k127_4237972_0 helicase superfamily c-terminal domain - - - 1.631e-228 724.0
HKD3_k127_4237972_1 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 1.085e-205 659.0
HKD3_k127_4237972_2 - - - - 0.000000000000000000000000000000002066 135.0
HKD3_k127_4237972_3 superoxide reductase activity K05919 - 1.15.1.2 0.00000000000000919 79.0
HKD3_k127_4238453_0 TRAP-type C4-dicarboxylate transport system periplasmic component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007723 324.0
HKD3_k127_4238453_1 Belongs to the ATCase OTCase family K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009267,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009605,GO:0009987,GO:0009991,GO:0016036,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0034641,GO:0034654,GO:0042594,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046390,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0071496,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001282 317.0
HKD3_k127_4238453_2 Belongs to the carbamate kinase family K00926 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006525,GO:0006527,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008804,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009987,GO:0016054,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0019546,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 2.7.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002448 289.0
HKD3_k127_4238453_3 C4-dicarboxylate ABC transporter permease - - - 0.00000000000000000000000000000000000000000000000002991 183.0
HKD3_k127_4238453_4 Trap-type c4-dicarboxylate transport system, small permease component K11689 - - 0.00000000000000000000000000001099 125.0
HKD3_k127_4255647_0 xanthine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001858 570.0
HKD3_k127_4255647_1 ATPases associated with a variety of cellular activities - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000136 262.0
HKD3_k127_4255647_2 ATPases associated with a variety of cellular activities K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000002759 240.0
HKD3_k127_4255647_3 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM K03519,K18021 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0016491,GO:0016903,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.2.5.3,1.2.99.8 0.0000000000000000000000000000000000000000000000000000008021 204.0
HKD3_k127_4258405_0 Psort location CytoplasmicMembrane, score K07793 - - 4.282e-197 625.0
HKD3_k127_4258405_1 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009245 604.0
HKD3_k127_4258405_2 PFAM Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006021 275.0
HKD3_k127_4258405_3 - K07018 - - 0.000000000000000000000000000000000000000000000000000001749 198.0
HKD3_k127_4258405_4 Hemerythrin HHE cation binding domain - - - 0.000000000000000000000000000000000000000000000000008436 186.0
HKD3_k127_4258405_5 PFAM Enoyl-CoA hydratase isomerase - - - 0.0000000000000000000000000000000000000000000000000985 186.0
HKD3_k127_4258405_6 PFAM Xylose isomerase-like TIM barrel - - - 0.00000000000000000000000000000000000000001349 166.0
HKD3_k127_4258405_7 Acyl-transferase K00655 - 2.3.1.51 0.000000000000000000000000000000000000002357 154.0
HKD3_k127_430668_0 DNA helicase K03657 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001463 565.0
HKD3_k127_430668_1 PFAM Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009442 426.0
HKD3_k127_430668_2 Enoyl-(Acyl carrier protein) reductase K00046 - 1.1.1.69 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 298.0
HKD3_k127_430668_3 Threonine synthase K01733 - 4.2.3.1 0.000000000000000000003155 96.0
HKD3_k127_4314844_0 PFAM glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 312.0
HKD3_k127_4314844_1 transferase activity, transferring glycosyl groups K13693 - 2.4.1.266 0.00000000000000000000000000000000000000000000000000000000000000000000000000001572 276.0
HKD3_k127_4314844_2 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000001565 151.0
HKD3_k127_4406338_0 Methylmalonyl-CoA mutase K01847,K01848 - 5.4.99.2 1.811e-258 807.0
HKD3_k127_4406338_1 Fumarate reductase flavoprotein C-term K00239 - 1.3.5.1,1.3.5.4 5.936e-214 679.0
HKD3_k127_4406338_10 branched-chain amino acid transmembrane transporter activity K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004882 263.0
HKD3_k127_4406338_11 PFAM Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.000000000000000000000000000000000000000000000000000000636 195.0
HKD3_k127_4406338_12 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00242 - - 0.000000000000000003003 88.0
HKD3_k127_4406338_13 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00241 - - 0.00000000000000112 80.0
HKD3_k127_4406338_14 Belongs to the binding-protein-dependent transport system permease family K01997,K01999 - - 0.000000000000001203 78.0
HKD3_k127_4406338_2 PFAM Pyruvate carboxyltransferase - - - 2.472e-213 672.0
HKD3_k127_4406338_3 Malic enzyme, NAD binding domain K00027,K00029 - 1.1.1.38,1.1.1.40 1.377e-206 650.0
HKD3_k127_4406338_4 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002277 432.0
HKD3_k127_4406338_5 TIGRFAM hydro-lyases, Fe-S type, tartrate fumarate subfamily, alpha region K01677 - 4.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002508 397.0
HKD3_k127_4406338_6 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 340.0
HKD3_k127_4406338_7 2Fe-2S iron-sulfur cluster binding domain K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 309.0
HKD3_k127_4406338_8 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005228 288.0
HKD3_k127_4406338_9 Hydro-lyase, Fe-S type, tartrate fumarate subfamily, beta subunit K01678 - 4.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000045 258.0
HKD3_k127_4408871_0 PFAM Glycosyl transferases group 1 K13057 - 2.4.1.245 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001682 470.0
HKD3_k127_4408871_1 Glycosyltransferase family 20 K00697,K13057,K20436 - 2.4.1.15,2.4.1.245,2.4.1.347,2.5.1.135 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007507 370.0
HKD3_k127_4408871_2 transmembrane transport - - - 0.0000000000000000000000000000000000003734 149.0
HKD3_k127_4408871_3 Pfam:DUF1049 - - - 0.000173 47.0
HKD3_k127_4424951_0 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001756 394.0
HKD3_k127_4424951_1 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002547 363.0
HKD3_k127_4424951_2 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 GO:0003674,GO:0003824,GO:0005215,GO:0006810,GO:0006811,GO:0006817,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015114,GO:0015318,GO:0015399,GO:0015405,GO:0015415,GO:0015698,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0034220,GO:0035435,GO:0042623,GO:0042626,GO:0043225,GO:0043492,GO:0051179,GO:0051234,GO:0055085,GO:0098656,GO:0098660,GO:0098661,GO:0099133 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 349.0
HKD3_k127_4424951_3 TIGRFAM phosphate ABC transporter, inner membrane subunit PstA K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002477 330.0
HKD3_k127_4424951_4 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001743 322.0
HKD3_k127_4424951_5 Plays a role in the regulation of phosphate uptake K02039 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002259 276.0
HKD3_k127_4424951_6 PBP superfamily domain K02040 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002781 272.0
HKD3_k127_4424951_7 - - - - 0.000000000000000000221 93.0
HKD3_k127_442788_0 Amidase K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005381 336.0
HKD3_k127_442788_1 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001784 307.0
HKD3_k127_442788_2 Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001166 284.0
HKD3_k127_442788_3 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000557 181.0
HKD3_k127_4450233_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 7.606e-205 670.0
HKD3_k127_4450233_1 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004035 263.0
HKD3_k127_4450233_2 Cyclic nucleotide-monophosphate binding domain K04739 - - 0.000000000000000000000000000000001318 138.0
HKD3_k127_4451067_0 FAD dependent oxidoreductase K07137 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004061 512.0
HKD3_k127_4461100_0 PFAM Major Facilitator Superfamily K08177 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007636 463.0
HKD3_k127_4461100_1 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000005838 263.0
HKD3_k127_4484819_0 CoA-transferase family III K07749 - 2.8.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002093 407.0
HKD3_k127_4484819_1 BadF BadG BcrA BcrD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 338.0
HKD3_k127_4484819_2 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008393 312.0
HKD3_k127_4484819_3 Major facilitator superfamily - GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000001873 256.0
HKD3_k127_4487720_0 Iron-sulfur cluster-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004088 332.0
HKD3_k127_4487720_1 Acyl-CoA dehydrogenase, N-terminal K00248,K18244 - 1.3.8.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005761 324.0
HKD3_k127_4487720_2 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000003901 258.0
HKD3_k127_4487720_3 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005159 248.0
HKD3_k127_4487720_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004967 246.0
HKD3_k127_4487720_5 TraB family K00657,K09973 - 2.3.1.57 0.000000000000000000000000000000000000000000000000000000000002406 219.0
HKD3_k127_4487720_6 - - - - 0.0000000000000000000000000000000000000000000000000000000008518 211.0
HKD3_k127_4499525_0 Branched-chain amino acid transport system / permease component K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003603 278.0
HKD3_k127_4499525_1 ABC transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000501 264.0
HKD3_k127_4499525_2 ATPases associated with a variety of cellular activities - - - 0.000000000000000000000000000000000000000000000000000000000000000002427 235.0
HKD3_k127_4499525_3 Branched-chain amino acid transport system / permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000001187 235.0
HKD3_k127_4499525_4 PFAM Isochorismatase - - - 0.00000000000000000000000000000000004955 140.0
HKD3_k127_4499525_5 4Fe-4S dicluster domain K17723 - 1.3.1.1 0.00000000000000004459 90.0
HKD3_k127_4559328_0 Arginyl-tRNA synthetase K01887 - 6.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002799 522.0
HKD3_k127_4559328_1 TIGRFAM Cell division ATP-binding protein FtsE K09812 - - 0.000000000000000000000000000000000000000000000000000000000000001146 228.0
HKD3_k127_4559328_2 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.000000000000000000000000000000000000000000000000000000000504 214.0
HKD3_k127_4559328_3 Peptidase family M23 K21471 - - 0.0000000003083 68.0
HKD3_k127_4559328_4 Sporulation related domain - - - 0.0002737 51.0
HKD3_k127_4594970_0 - - - - 1.362e-229 719.0
HKD3_k127_4594970_1 Creatinase/Prolidase N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007988 539.0
HKD3_k127_4594970_10 NMT1-like family K07080 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003814 264.0
HKD3_k127_4594970_11 ABC transporter (Permease K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003088 265.0
HKD3_k127_4594970_12 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003992 249.0
HKD3_k127_4594970_13 Belongs to the binding-protein-dependent transport system permease family K11961 - - 0.000000000000000000000000000000000000000000000000000000000000000001349 239.0
HKD3_k127_4594970_14 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000002938 222.0
HKD3_k127_4594970_15 COG0410 ABC-type branched-chain amino acid transport systems, ATPase component K01996 GO:0000166,GO:0003333,GO:0003674,GO:0005215,GO:0005304,GO:0005342,GO:0005488,GO:0005524,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006855,GO:0006865,GO:0008144,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015175,GO:0015179,GO:0015188,GO:0015238,GO:0015318,GO:0015658,GO:0015711,GO:0015801,GO:0015803,GO:0015804,GO:0015807,GO:0015818,GO:0015823,GO:0015829,GO:0015849,GO:0015893,GO:0017076,GO:0022857,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034220,GO:0035639,GO:0036094,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0097159,GO:0097367,GO:0098655,GO:0098656,GO:1901265,GO:1901363,GO:1902475,GO:1903714,GO:1903785,GO:1903825,GO:1905039 - 0.0000000000000000000000000000000000000000000000000000000000001965 219.0
HKD3_k127_4594970_16 Transcriptional regulator IclR - - - 0.0000000000000000000000000000000000000000000000000000000000005214 220.0
HKD3_k127_4594970_17 Quinolinate phosphoribosyl transferase, N-terminal domain K00767 - 2.4.2.19 0.000000000000000000000000000000000000000000000000000000006245 208.0
HKD3_k127_4594970_18 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.0000000000000000000000000000000000000000000000000002673 192.0
HKD3_k127_4594970_19 NMT1-like family K07080 - - 0.000000000000000000000000000000000000000000002099 179.0
HKD3_k127_4594970_2 TRAP transporter, 4TM 12TM fusion protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001464 518.0
HKD3_k127_4594970_20 Tripartite tricarboxylate transporter TctA family K07793 - - 0.000000000000000000000000000000000000000000006376 168.0
HKD3_k127_4594970_21 helicase superfamily c-terminal domain - - - 0.00000008907 55.0
HKD3_k127_4594970_3 Belongs to the UbiD family K16874 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003542 435.0
HKD3_k127_4594970_4 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006707 398.0
HKD3_k127_4594970_5 TIGRFAM TRAP transporter, 4TM 12TM fusion protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002665 390.0
HKD3_k127_4594970_6 Fumarylacetoacetate (FAA) hydrolase family K01617,K02554 - 4.1.1.77,4.2.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000467 306.0
HKD3_k127_4594970_7 lactate racemase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005876 306.0
HKD3_k127_4594970_8 Probable molybdopterin binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002666 292.0
HKD3_k127_4594970_9 COG0559 Branched-chain amino acid ABC-type transport system, permease components K01997,K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001528 264.0
HKD3_k127_460325_0 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001773 355.0
HKD3_k127_460325_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008283 258.0
HKD3_k127_460325_2 formate dehydrogenase K00127 - - 0.000000000000000000000000000000000000000000000000000000000000000000002033 244.0
HKD3_k127_460325_3 Haemolytic - - - 0.00000000000000000000000001533 113.0
HKD3_k127_460325_4 PFAM Heavy metal transport detoxification protein K07213 - - 0.0000000000000007555 79.0
HKD3_k127_460325_5 - - - - 0.0000002869 55.0
HKD3_k127_460325_6 Metal-sensitive transcriptional repressor K21600 - - 0.00001094 49.0
HKD3_k127_4627351_0 Carboxyl transferase domain - - - 1.687e-228 716.0
HKD3_k127_4642510_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002994 557.0
HKD3_k127_4642510_1 pilus assembly protein K02662 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003189 366.0
HKD3_k127_4642510_2 type IV pilus secretin PilQ K02666 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002394 372.0
HKD3_k127_4642510_3 Pilus assembly protein, PilO K02664 - - 0.000000000000000000000000000000000000000000005086 171.0
HKD3_k127_4642510_4 Fimbrial assembly protein (PilN) K02663 - - 0.000000000000000000000000000001187 129.0
HKD3_k127_4642510_5 Pilus assembly protein, PilP K02665 - - 0.000000000000000006221 91.0
HKD3_k127_4665172_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 1.951e-277 868.0
HKD3_k127_4665172_1 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.00000000000000000007914 98.0
HKD3_k127_4695949_0 cyclohydrolase K01746 - 4.3.1.4 0.000000000000000000000000000000000000000007984 162.0
HKD3_k127_4695949_1 HMGL-like K01640 - 4.1.3.4 0.00000000000000002898 90.0
HKD3_k127_4698980_0 Peptidase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000564 451.0
HKD3_k127_4698980_1 Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB) K02549 - 4.2.1.113 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008219 409.0
HKD3_k127_4698980_2 Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB) K02549 - 4.2.1.113 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002809 369.0
HKD3_k127_4698980_3 Inosine-uridine preferring nucleoside hydrolase K01239,K01250 - 3.2.2.1 0.000000000000000000000000000000000000000000000000000000000006009 220.0
HKD3_k127_4698980_4 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway K00852 - 2.7.1.15 0.000000000000000000000000002371 115.0
HKD3_k127_476995_0 Haem-binding uptake, Tiki superfamily, ChaN - - - 4.327e-214 702.0
HKD3_k127_476995_1 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 3.553e-203 649.0
HKD3_k127_476995_2 PFAM Extracellular ligand-binding receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 423.0
HKD3_k127_476995_3 ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001909 348.0
HKD3_k127_476995_4 PFAM ABC transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000248 341.0
HKD3_k127_476995_5 Permease family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001455 286.0
HKD3_k127_476995_6 PFAM Extracellular ligand-binding receptor - - - 0.0000000000000000000000000000000000000000000000006889 180.0
HKD3_k127_4833304_0 Glycosyl hydrolase family 57 - - - 9.781e-199 643.0
HKD3_k127_4833304_1 Belongs to the glycosyl hydrolase 57 family K22451 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.4.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 528.0
HKD3_k127_4833304_10 PFAM 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000004241 131.0
HKD3_k127_4833304_11 Domain of unknown function (DUF4412) - - - 0.00000000000000000000000000000000524 135.0
HKD3_k127_4833304_2 diaminopimelate decarboxylase activity K01581 - 4.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003233 456.0
HKD3_k127_4833304_3 PFAM 2-nitropropane dioxygenase NPD K02371 - 1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009606 384.0
HKD3_k127_4833304_4 Belongs to the deoxyhypusine synthase family K00809 - 2.5.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003349 385.0
HKD3_k127_4833304_5 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 355.0
HKD3_k127_4833304_6 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004304 353.0
HKD3_k127_4833304_7 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000006998 259.0
HKD3_k127_4833304_8 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000001554 256.0
HKD3_k127_4833304_9 TIGRFAM cation diffusion facilitator family transporter K16264 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004593 253.0
HKD3_k127_4833903_0 Tripartite tricarboxylate transporter TctA family K07793 - - 1.909e-221 691.0
HKD3_k127_4833903_1 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) - - - 0.000000000000000000000000000000000000000000000000000000000000000000002397 241.0
HKD3_k127_4833903_2 membrane K07794 - - 0.0000000000000000000000000000000000000000000000000000000007066 204.0
HKD3_k127_4843424_0 PFAM 4-hydroxyphenylacetate 3-hydroxylase N terminal K14534 - 4.2.1.120,5.3.3.3 5.19e-232 726.0
HKD3_k127_4843424_1 acyl-CoA dehydrogenase K00248 - 1.3.8.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002765 478.0
HKD3_k127_4843663_0 PFAM major facilitator superfamily MFS_1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008565 508.0
HKD3_k127_4843663_1 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000000000000000000000000000127 220.0
HKD3_k127_4845741_0 PFAM Branched-chain amino acid transport system permease component K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002037 306.0
HKD3_k127_4845741_1 ATPases associated with a variety of cellular activities K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002204 273.0
HKD3_k127_4845741_2 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000001497 245.0
HKD3_k127_4845741_3 Branched-chain amino acid ATP-binding cassette transporter K01995,K01998 - - 0.00002443 47.0
HKD3_k127_4845741_4 Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.0001011 44.0
HKD3_k127_4848209_0 Belongs to the DegT DnrJ EryC1 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002985 404.0
HKD3_k127_4848209_1 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.000000000000004435 75.0
HKD3_k127_4848209_2 Protein of unknown function (DUF4013) - - - 0.00000001644 64.0
HKD3_k127_485454_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 1.121e-303 945.0
HKD3_k127_4855288_0 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00179 - 1.2.7.8 1.097e-227 721.0
HKD3_k127_4855288_1 Flavoprotein family K07007 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001964 394.0
HKD3_k127_4855288_2 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000187 374.0
HKD3_k127_4855288_3 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 0.00000000000000000000000000000000000000000000000000000000000004587 217.0
HKD3_k127_4855288_4 Pyruvate ferredoxin/flavodoxin oxidoreductase - - - 0.0000000000000000000000000000000000000000000000001229 184.0
HKD3_k127_4855288_5 'Cold-shock' DNA-binding domain K03704 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006355,GO:0006950,GO:0008150,GO:0009266,GO:0009409,GO:0009628,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000000000000000007431 108.0
HKD3_k127_4855288_6 Thymidylate synthase K00560 - 2.1.1.45 0.00000000001731 67.0
HKD3_k127_4869827_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 589.0
HKD3_k127_4869827_1 COG3839 ABC-type sugar transport systems, ATPase components - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002286 481.0
HKD3_k127_4869827_10 PFAM binding-protein-dependent transport systems inner membrane component K02026 - - 0.0000000000000000000000000000000000000000000000000004287 197.0
HKD3_k127_4869827_11 SIS domain - - - 0.000000000000000000000000000000000000000000000000001419 203.0
HKD3_k127_4869827_12 Bacterial extracellular solute-binding protein K02027 - - 0.0000000000000000000000000000000000000000000002356 183.0
HKD3_k127_4869827_13 Cupin 2, conserved barrel domain protein K00971,K01809,K16011 - 2.7.7.13,5.3.1.8 0.0000000000000000000000000000000000000002022 154.0
HKD3_k127_4869827_14 Domain of unknown function (DUF3483) K21834 - - 0.0000000000000000000000000001039 123.0
HKD3_k127_4869827_15 Cro/C1-type HTH DNA-binding domain - - - 0.00000000000000000000000001292 117.0
HKD3_k127_4869827_16 3-hydroxyanthranilate 3,4-dioxygenase activity - - - 0.0000000000000000000378 94.0
HKD3_k127_4869827_17 Periplasmic binding protein domain K10439 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0008643,GO:0015144,GO:0015145,GO:0015749,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0034219,GO:0044425,GO:0044464,GO:0051119,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944 - 0.0000000000000001365 91.0
HKD3_k127_4869827_18 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.000000002046 64.0
HKD3_k127_4869827_19 Cupin 2, conserved barrel domain protein - - - 0.000002813 54.0
HKD3_k127_4869827_2 Psort location Cytoplasmic, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005186 433.0
HKD3_k127_4869827_3 Psort location Cytoplasmic, score - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000398 421.0
HKD3_k127_4869827_4 import. Responsible for energy coupling to the transport system K10441 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0006810,GO:0008144,GO:0008150,GO:0008643,GO:0015144,GO:0015145,GO:0015146,GO:0015399,GO:0015405,GO:0015407,GO:0015591,GO:0015608,GO:0015611,GO:0015749,GO:0015750,GO:0015752,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034219,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0043167,GO:0043168,GO:0043211,GO:0043492,GO:0051119,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0097159,GO:0097367,GO:1901265,GO:1901363 3.6.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002184 412.0
HKD3_k127_4869827_5 PFAM oxidoreductase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001988 280.0
HKD3_k127_4869827_6 Belongs to the binding-protein-dependent transport system permease family K10440 - - 0.000000000000000000000000000000000000000000000000000000000000000000002354 246.0
HKD3_k127_4869827_7 Domain of unknown function (DUF2088) - - - 0.0000000000000000000000000000000000000000000000000000000000004413 229.0
HKD3_k127_4869827_8 ROK family - - - 0.000000000000000000000000000000000000000000000000000000000001282 225.0
HKD3_k127_4869827_9 ABC-type sugar transport systems permease components K02025 - - 0.000000000000000000000000000000000000000000000000000000004437 209.0
HKD3_k127_4875062_0 Malate/L-lactate dehydrogenase K00073 - 1.1.1.350 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003883 367.0
HKD3_k127_4875062_1 Zn-dependent dipeptidase, microsomal dipeptidase - - - 0.00006142 47.0
HKD3_k127_4875676_0 Ftsk_gamma K03466 - - 1.019e-216 695.0
HKD3_k127_4875676_1 PFAM Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004385 458.0
HKD3_k127_4875676_2 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006976 432.0
HKD3_k127_4875676_3 Binding-protein-dependent transport system inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001958 248.0
HKD3_k127_4875676_4 Outer membrane lipoprotein carrier protein LolA K03634 - - 0.000000000000000000000000000000000000000000242 168.0
HKD3_k127_4875676_5 Phosphate acyltransferases K00655 - 2.3.1.51 0.0000000000000000000000000000000000000002031 160.0
HKD3_k127_488461_0 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 - 2.1.1.74 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007384 546.0
HKD3_k127_488461_1 FAD binding domain - - - 0.0000000000000000000000000000000000000000000000001979 192.0
HKD3_k127_488461_2 PLD-like domain K06131 - - 0.00000000000000000000000000000000000001129 154.0
HKD3_k127_4886504_0 PFAM Extracellular ligand-binding receptor K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003734 440.0
HKD3_k127_4886504_1 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003622 279.0
HKD3_k127_4886504_2 ABC transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004308 258.0
HKD3_k127_4886504_3 ABC transporter K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000122 239.0
HKD3_k127_4886504_4 Belongs to the binding-protein-dependent transport system permease family - - - 0.0000000000000000000000000000000000000000000000000000000000006681 226.0
HKD3_k127_4886504_5 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000003363 184.0
HKD3_k127_4886504_6 PFAM Radical SAM - - - 0.00000000000000000000000000000000000000003655 166.0
HKD3_k127_4886504_7 NUDIX domain - - - 0.000000000000000000000000000000000001177 144.0
HKD3_k127_4886504_8 Iron-sulfur cluster-binding domain K06139 - - 0.00000000008696 74.0
HKD3_k127_4886504_9 Peptidase M1, membrane alanine aminopeptidase - - - 0.000009084 58.0
HKD3_k127_4907936_0 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004147 568.0
HKD3_k127_4907936_1 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.00000000000000000000000000000000000000003266 173.0
HKD3_k127_4944407_0 Ferrous iron transport protein B K03977 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003388 458.0
HKD3_k127_4944407_1 Belongs to the UPF0271 (lamB) family K07160 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004406 294.0
HKD3_k127_4944407_2 Allophanate hydrolase subunit 2 K06350 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001674 293.0
HKD3_k127_4944407_3 Allophanate hydrolase subunit 1 K06351 - - 0.000000000000000000000000000000000000000000000000000000000000000000005567 241.0
HKD3_k127_4944407_4 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.0000000000000000000000000000000000000000000000000000000007745 205.0
HKD3_k127_4944407_5 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.0000000000000000000000000000000000000000000116 165.0
HKD3_k127_4944407_6 ACT domain - - - 0.00000000000000000000000000004536 123.0
HKD3_k127_4952173_0 PFAM AMP-dependent synthetase and ligase K00666 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001846 428.0
HKD3_k127_4952173_1 Domain of unknown function (DUF2088) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004053 250.0
HKD3_k127_4952173_2 RNA-binding protein homologous to eukaryotic snRNP - - - 0.0000000000000000000000000000000000000000000000000000000007011 222.0
HKD3_k127_4952173_3 Putative glutamine amidotransferase - - - 0.0000000000000000000000000000000000000000000000000002612 193.0
HKD3_k127_4952173_4 RNA-binding protein homologous to eukaryotic snRNP - - - 0.00000000000000000000007964 104.0
HKD3_k127_4961588_0 Aconitase C-terminal domain K01681 - 4.2.1.3 0.0 1009.0
HKD3_k127_4961588_1 succinate dehydrogenase or fumarate reductase, flavoprotein K00239 - 1.3.5.1,1.3.5.4 8.445e-262 816.0
HKD3_k127_4961588_2 Belongs to the TPP enzyme family K01652 - 2.2.1.6 1.503e-234 736.0
HKD3_k127_4961588_3 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002245 562.0
HKD3_k127_4961588_4 PFAM Aldehyde dehydrogenase K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002708 526.0
HKD3_k127_4961588_5 Isocitrate dehydrogenase K00031 - 1.1.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002198 520.0
HKD3_k127_4961588_6 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240,K00245 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 365.0
HKD3_k127_4961588_7 FMN-dependent dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004182 340.0
HKD3_k127_4969549_0 ferredoxin iron-sulfur binding - - - 0.000000000000000000000000000000000000000000000000000000000000736 218.0
HKD3_k127_4969549_1 Sulfatase-modifying factor enzyme 1 - - - 0.00000000000000000000000000000000000000000000000002414 194.0
HKD3_k127_4969549_2 nitroreductase - - - 0.00000000000000000000000000000000000000664 150.0
HKD3_k127_4972180_0 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000007177 245.0
HKD3_k127_4972180_1 ATP-grasp domain K01903 - 6.2.1.5 0.0000000000001219 72.0
HKD3_k127_4975648_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00336 - 1.6.5.3 6.81e-247 790.0
HKD3_k127_4975648_1 NADH ubiquinone oxidoreductase, NADH-binding K00124,K00335,K00355,K05587,K18331 - 1.12.1.3,1.6.5.2,1.6.5.3 6.84e-247 776.0
HKD3_k127_4975648_2 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus K00341 - 1.6.5.3 1.245e-243 767.0
HKD3_k127_4975648_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009237 428.0
HKD3_k127_4975648_4 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.00000000000000000000000000000000000000002542 159.0
HKD3_k127_4975648_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.00000000000000000000000000000000000000003004 157.0
HKD3_k127_4975648_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.000000000000000000000000000000000003628 139.0
HKD3_k127_4975648_7 PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334 - 1.6.5.3 0.0000000000000000000000008777 106.0
HKD3_k127_49830_0 Major Facilitator Superfamily K02575 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003758 284.0
HKD3_k127_49830_1 Aldolase/RraA - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007994 253.0
HKD3_k127_49830_2 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000003149 160.0
HKD3_k127_49830_3 NADPH-dependent FMN reductase - - - 0.0000000000000000000000000000000007121 137.0
HKD3_k127_49830_4 KR domain - - - 0.0000000000000001098 81.0
HKD3_k127_5036361_0 Protein of unknown function, DUF255 K06888 - - 8.828e-255 799.0
HKD3_k127_5036361_2 Rubredoxin - - - 0.000000000000000000000001165 104.0
HKD3_k127_505672_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 3.665e-247 770.0
HKD3_k127_505672_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000733 290.0
HKD3_k127_505672_2 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.0000000000000000000000000000000001954 139.0
HKD3_k127_5057496_0 C4-dicarboxylate ABC transporter permease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008325 434.0
HKD3_k127_5057496_1 COG0179 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) K16164 - 3.7.1.5 0.0000000000000000000000000000000000000000000000000000000000000000004706 242.0
HKD3_k127_5059260_0 PFAM Pyridoxal-dependent decarboxylase K01580 - 4.1.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005527 271.0
HKD3_k127_5059260_1 Phage integrase family - - - 0.0000000000000000000000000000000000000000000000000000000000006967 222.0
HKD3_k127_5059260_2 DNA polymerase III, delta' K02340 - 2.7.7.7 0.000000000000000000000000007026 126.0
HKD3_k127_5060953_0 PFAM phosphate transporter K03306 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007998 340.0
HKD3_k127_5060953_1 - - - - 0.0000000000000000000000000000000000000000000000000000000002346 211.0
HKD3_k127_5060953_2 Phosphate transport regulator K07220 - - 0.00000000000000000000000000000000002329 142.0
HKD3_k127_5062188_0 CoA enzyme activase uncharacterised domain (DUF2229) - - - 1.555e-254 835.0
HKD3_k127_5062188_1 PFAM TRAP C4-dicarboxylate transport system permease DctM subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000233 504.0
HKD3_k127_5062188_2 carbohydrate transport K21395 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008995 434.0
HKD3_k127_5062188_3 Ndr family - - - 0.000000000000000000000000000000000000000000000000000000000000000000004737 243.0
HKD3_k127_5062188_4 Bacterial transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000006534 197.0
HKD3_k127_5062188_5 Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate K01815 - 5.3.1.17 0.000000000000000000000000000000000000000000000001401 176.0
HKD3_k127_5062188_6 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000000000000000000000001033 138.0
HKD3_k127_5083745_0 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 436.0
HKD3_k127_5083745_1 Cytochrome C assembly protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002947 320.0
HKD3_k127_5083745_2 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001412 273.0
HKD3_k127_5083745_3 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003726 249.0
HKD3_k127_5083745_4 Imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.000000000000000000000000000000000000000000000000000000000000000001078 233.0
HKD3_k127_5083745_5 TIGRFAM siroheme synthase K02304 - 1.3.1.76,4.99.1.4 0.0000000000000000000000000000000000000000000005094 179.0
HKD3_k127_5096521_0 Uncharacterised protein family (UPF0261) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004929 370.0
HKD3_k127_5096521_1 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000201 263.0
HKD3_k127_5096521_2 Dihydrodipicolinate synthetase family K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000002343 264.0
HKD3_k127_5096521_3 glycerophosphodiester transmembrane transport K02026 - - 0.000000000000000000000000000000000000000000000000000000000000000009658 233.0
HKD3_k127_5096521_4 PFAM binding-protein-dependent transport systems inner membrane component K10193 - - 0.000000000000000000000000000000000000000000000000000000000009201 218.0
HKD3_k127_5096521_5 glucose-6-phosphate isomerase K06859 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 5.3.1.9 0.000000000000000000000000000000000000000000000000000001951 197.0
HKD3_k127_5096521_6 Enoyl-(Acyl carrier protein) reductase K00059,K07535 - 1.1.1.100 0.000000000000000000000000000000000000000124 158.0
HKD3_k127_5096521_7 PFAM Bacterial extracellular solute-binding protein K02027 - - 0.0000000000000000000000000000000002856 148.0
HKD3_k127_511841_0 PFAM ABC transporter related K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005875 314.0
HKD3_k127_511841_1 ABC-type nitrate sulfonate bicarbonate transport system permease component K02050 - - 0.00000000000000000000000000000000000000000000000000000000000001561 229.0
HKD3_k127_511841_2 NMT1/THI5 like K02051 - - 0.0000000000000000000000000000000000000000000000000000000000001555 226.0
HKD3_k127_511841_3 PFAM Trimethylamine methyltransferase (MTTB) K14083 - 2.1.1.250 0.0000000000000000000000000000000000000000000000000009793 201.0
HKD3_k127_511841_4 PspC domain - - - 0.0000000000003655 72.0
HKD3_k127_511841_5 - - - - 0.0000001829 55.0
HKD3_k127_511841_6 S-layer homology domain - - - 0.0000003441 56.0
HKD3_k127_511841_7 Uncharacterised ArCR, COG2043 - - - 0.00005332 45.0
HKD3_k127_5128608_0 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 1.072e-225 715.0
HKD3_k127_5128608_1 Aminotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003254 559.0
HKD3_k127_5128608_2 helix_turn _helix lactose operon repressor K02529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001355 326.0
HKD3_k127_5128608_3 Psort location Cytoplasmic, score - - - 0.000000000000000000000000000000000000000000000000000000000000001647 225.0
HKD3_k127_5135477_0 POTRA domain TamA domain 1 K07277,K07278 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002554 553.0
HKD3_k127_5135477_1 Protein involved in meta-pathway of phenol degradation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 374.0
HKD3_k127_5135477_2 Las17-binding protein actin regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002192 259.0
HKD3_k127_5135477_3 MlaD protein K06192 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001652 264.0
HKD3_k127_5135477_4 PFAM ABC transporter related K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000104 232.0
HKD3_k127_5135477_5 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.000000000000000000000000000000000000000000000000000000007915 221.0
HKD3_k127_5135477_6 ABC-type transport auxiliary lipoprotein component K09857 - - 0.00000000000000000000000000000000000007777 150.0
HKD3_k127_5175689_0 PFAM Acyl-CoA dehydrogenase K00248 - 1.3.8.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001763 591.0
HKD3_k127_5175689_1 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002738 399.0
HKD3_k127_5175689_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000555 398.0
HKD3_k127_5175689_3 TIGRFAM malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002926 312.0
HKD3_k127_5175689_4 Uncharacterized ACR, COG1399 K07040 - - 0.000000000000000000000001216 110.0
HKD3_k127_5175689_5 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.0000000000000000006486 87.0
HKD3_k127_5192785_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 9.928e-243 763.0
HKD3_k127_5192785_1 Na+-transporting oxaloacetate decarboxylase beta subunit K01572 - 4.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 522.0
HKD3_k127_5192785_2 MOFRL family K11529 - 2.7.1.165 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002646 525.0
HKD3_k127_5192785_3 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042,K11528 - 2.3.1.157,2.7.7.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003706 495.0
HKD3_k127_5192785_4 AAA domain K07028 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 447.0
HKD3_k127_5192785_5 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000177 160.0
HKD3_k127_5197232_0 Belongs to the GPI family K01810 - 5.3.1.9 1.99e-265 827.0
HKD3_k127_5197232_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009699 526.0
HKD3_k127_5197232_2 PFAM Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 480.0
HKD3_k127_5197232_3 Sodium/calcium exchanger protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002994 351.0
HKD3_k127_520885_0 mannitol 2-dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003128 550.0
HKD3_k127_520885_1 TRAP-type C4-dicarboxylate transport system periplasmic component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001146 476.0
HKD3_k127_520885_2 Tripartite tricarboxylate transporter TctA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000422 361.0
HKD3_k127_520885_3 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 302.0
HKD3_k127_520885_4 Carbohydrate ABC transporter membrane protein 2, CUT1 family K02026 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002912 284.0
HKD3_k127_520885_5 Binding-protein-dependent transport system inner membrane component K02025 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001138 279.0
HKD3_k127_520885_6 L-malate dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001524 263.0
HKD3_k127_520885_7 Trap-type c4-dicarboxylate transport system, small permease component K11689 - - 0.0000000000000000000000000000000000000000000000003996 181.0
HKD3_k127_520885_8 Transcriptional regulator K13641 - - 0.0000000000000000000000000000000000000000000673 171.0
HKD3_k127_520885_9 Tripartite tricarboxylate transporter TctB family - - - 0.000000000000000000000000000002242 129.0
HKD3_k127_5211530_0 Protein of unknown function (DUF521) K09123 - - 6.726e-203 640.0
HKD3_k127_5211530_1 Domain of unknown function (DUF2088) - - - 0.00000000000000000000000000000000000000000000000000000000000000000002233 238.0
HKD3_k127_5211530_2 Protein of unknown function DUF126 K09128 - - 0.000000000000000000000000000000000000000000000009281 175.0
HKD3_k127_5238332_0 Arylsulfotransferase (ASST) - - - 7.391e-260 818.0
HKD3_k127_5238332_1 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005307 335.0
HKD3_k127_5238332_2 Belongs to the ArsC family K04069 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000005545 250.0
HKD3_k127_5238332_3 MFS_1 like family - - - 0.000000000000000000000000000000000000000000000001347 188.0
HKD3_k127_5238332_4 TRAP transporter solute receptor, TAXI family K07080 - - 0.000000000503 66.0
HKD3_k127_5240132_0 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003336 458.0
HKD3_k127_5240132_1 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006171 438.0
HKD3_k127_5240132_2 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002542 356.0
HKD3_k127_5240132_3 PAC2 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000468 334.0
HKD3_k127_5240132_4 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008245 311.0
HKD3_k127_5240132_5 Belongs to the enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000005707 217.0
HKD3_k127_5240132_6 phosphosulfolactate synthase activity K08097 - 4.4.1.19 0.000000000000000000000000000000000000000000000000777 190.0
HKD3_k127_5240132_7 Ethyl tert-butyl ether degradation EthD - - - 0.0000000000000000001952 100.0
HKD3_k127_5240132_8 PFAM Tripartite tricarboxylate transporter TctA family K07793 - - 0.000000000000000633 81.0
HKD3_k127_5256585_0 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 2.201e-246 773.0
HKD3_k127_5256585_1 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 3.34e-218 684.0
HKD3_k127_5256585_2 PFAM Extracellular ligand-binding receptor K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000839 393.0
HKD3_k127_5256585_3 single-stranded-DNA-specific exonuclease RecJ K07462 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002722 294.0
HKD3_k127_5256585_4 PFAM amino acid-binding ACT domain protein - - - 0.00000000000000000000000000000000000000000000000000000000001521 209.0
HKD3_k127_5256585_5 indolepyruvate ferredoxin oxidoreductase beta subunit K00180 - 1.2.7.8 0.0000000000000000000000000000000000000000000000000000000006269 207.0
HKD3_k127_5256585_6 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000521 129.0
HKD3_k127_5256585_7 Tetratricopeptide repeat-like domain - - - 0.0000000000000000142 92.0
HKD3_k127_5262782_0 PFAM Binding-protein-dependent transport system inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002056 464.0
HKD3_k127_5262782_1 PFAM Binding-protein-dependent transport system inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007915 441.0
HKD3_k127_5262782_2 pyridine nucleotide-disulfide oxidoreductase K00382 - 1.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 453.0
HKD3_k127_5262782_3 PFAM 3-hydroxyacyl-CoA dehydrogenase domain protein K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000005214 271.0
HKD3_k127_5262782_4 acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000001068 237.0
HKD3_k127_5262782_5 TIGRFAM hydrolase, TatD family K03424 - - 0.00000000000000000003039 93.0
HKD3_k127_5262782_6 Protein of unknown function (DUF664) - - - 0.0000000000001181 77.0
HKD3_k127_5280200_0 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 381.0
HKD3_k127_5280200_1 L-phenylalanine transmembrane transporter activity K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006308 366.0
HKD3_k127_5280200_2 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004748 320.0
HKD3_k127_5280200_3 branched-chain amino acid transmembrane transporter activity K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000453 282.0
HKD3_k127_5280200_4 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000184 258.0
HKD3_k127_5280200_5 phosphatase homologous to the C-terminal domain of histone macroH2A1 - - - 0.000000000000000000000000000000000000000000000000000000000000002804 221.0
HKD3_k127_5280200_6 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000003525 77.0
HKD3_k127_5280200_7 4Fe-4S dicluster domain - - - 0.0003341 44.0
HKD3_k127_5288481_0 Psort location CytoplasmicMembrane, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 362.0
HKD3_k127_5288481_1 Putative RNA methylase family UPF0020 K15460 - 2.1.1.223 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005234 315.0
HKD3_k127_5290678_0 PFAM AMP-dependent synthetase K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009241 544.0
HKD3_k127_5290678_1 Telomere recombination K07566 - 2.7.7.87 0.00000000000000000000000000000000000000000000000002196 187.0
HKD3_k127_529732_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 1.234e-213 678.0
HKD3_k127_529732_1 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 475.0
HKD3_k127_529732_10 Belongs to the bacterial ribosomal protein bS21 family K02970 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000005317 104.0
HKD3_k127_529732_2 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004474 437.0
HKD3_k127_529732_3 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005784 376.0
HKD3_k127_529732_4 PFAM Nucleotidyl transferase K00971 - 2.7.7.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005225 329.0
HKD3_k127_529732_5 TIGRFAM phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000002258 263.0
HKD3_k127_529732_6 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01840,K15778 - 5.4.2.2,5.4.2.8 0.000000000000000000000000000000000000000000000000000000008729 200.0
HKD3_k127_529732_7 Yqey-like protein K09117 - - 0.000000000000000000000000000000000001525 143.0
HKD3_k127_529732_8 C4-type zinc ribbon domain K07164 - - 0.000000000000000000000000000000000001542 148.0
HKD3_k127_529732_9 Ribonuclease H K03469 - 3.1.26.4 0.0000000000000000000000000000004943 136.0
HKD3_k127_5322778_0 SMART Elongator protein 3 MiaB NifB - - - 1.838e-253 807.0
HKD3_k127_5322778_1 TIGRFAM ribonuclease, Rne Rng family K08300,K08301 - 3.1.26.12 3.64e-205 650.0
HKD3_k127_5322778_10 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000003736 240.0
HKD3_k127_5322778_11 Acyl-CoA dehydrogenase, C-terminal domain K06446 - - 0.000000000000000000000000000000000000000000000000000000000000002338 222.0
HKD3_k127_5322778_12 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.7.18 0.000000000000000000000000000000000000000000000000000000000344 214.0
HKD3_k127_5322778_13 Conserved protein of dim6 ntab family - - - 0.00000000000000000000000000000000000000000000000000003012 196.0
HKD3_k127_5322778_14 PFAM Phosphoribosyltransferase - - - 0.0000000000000000000000000000000000000000000000000002381 198.0
HKD3_k127_5322778_15 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000000000000000001382 153.0
HKD3_k127_5322778_16 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000002101 136.0
HKD3_k127_5322778_17 Predicted SPOUT methyltransferase K00783 - 2.1.1.177 0.0000000000000000000000000000000009349 136.0
HKD3_k127_5322778_18 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.0000000000000000000000000000001372 126.0
HKD3_k127_5322778_2 Aldehyde dehydrogenase family K00147 GO:0003674,GO:0003824,GO:0004350,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114 1.2.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002602 558.0
HKD3_k127_5322778_3 Belongs to the TPP enzyme family K01576 - 4.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000472 514.0
HKD3_k127_5322778_4 TIGRFAM branched-chain amino acid aminotransferase K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 444.0
HKD3_k127_5322778_5 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 417.0
HKD3_k127_5322778_6 PFAM 4-hydroxyphenylacetate 3-hydroxylase N terminal K14534 - 4.2.1.120,5.3.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004622 415.0
HKD3_k127_5322778_7 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 GO:0003674,GO:0003824,GO:0004349,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0018130,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007994 407.0
HKD3_k127_5322778_8 Domain of unknown function (DUF362) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 313.0
HKD3_k127_5322778_9 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000001221 247.0
HKD3_k127_5336217_0 PFAM natural resistance-associated macrophage protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 603.0
HKD3_k127_5336217_1 MgtE intracellular - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 509.0
HKD3_k127_5336217_2 PFAM Peptidase M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 331.0
HKD3_k127_5336217_3 Cation transport protein K03498 - - 0.00000000000000001782 84.0
HKD3_k127_5338540_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1383.0
HKD3_k127_5338540_1 SCP-2 sterol transfer family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002176 339.0
HKD3_k127_5338540_11 TIGRFAM MoaD family protein K03636 - - 0.0009234 48.0
HKD3_k127_5338540_2 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004034 314.0
HKD3_k127_5338540_3 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000001958 229.0
HKD3_k127_5338540_4 aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.000000000000000000000000000000000000000000000000002662 196.0
HKD3_k127_5338540_5 Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.000000000000000000000000000000000000000000000000005595 190.0
HKD3_k127_5338540_6 oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor K10672,K10794 - 1.21.4.1,1.21.4.2 0.0000000000000000000000000000000000000000000000921 173.0
HKD3_k127_5338540_7 Domain of unknown function DUF302 - - - 0.00000000000000000000000000000000000001768 148.0
HKD3_k127_5338540_8 PFAM Creatinine amidohydrolase K01470 - 3.5.2.10 0.000000000000000000000000000000007785 137.0
HKD3_k127_5338540_9 2-nitropropane dioxygenase K02371 - 1.3.1.9 0.000000000000000001469 90.0
HKD3_k127_5345892_0 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity K03583 - 3.1.11.5 3.624e-273 866.0
HKD3_k127_5345892_1 tungstate binding K02020 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0030973,GO:0031975,GO:0042597,GO:0043167,GO:0043168,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007072 345.0
HKD3_k127_5345892_2 molybdate abc transporter K02018,K15496 - - 0.000000000000000000000000000000000000000000000000000000000000000000008343 244.0
HKD3_k127_5345892_3 Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system K02017,K02045,K15497 - 3.6.3.25,3.6.3.29,3.6.3.55 0.0000000000000000000000000000000000000000000000000000000000000000001026 244.0
HKD3_k127_5345892_4 HEAT repeat - - - 0.0000000000000000000000000000000000093 158.0
HKD3_k127_5345892_5 Phage integrase family - - - 0.00000000000000000000000009949 110.0
HKD3_k127_5345892_6 Bacterial regulatory helix-turn-helix protein, lysR family K02019,K05772 - - 0.0000000000000000000000005328 108.0
HKD3_k127_5345892_7 Transposase DDE domain - - - 0.000000000000002461 76.0
HKD3_k127_5345892_8 HEAT repeat - - - 0.000000000000622 83.0
HKD3_k127_5345892_9 Phage integrase family - - - 0.00001817 49.0
HKD3_k127_5355593_0 PFAM PfkB K00856 - 2.7.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004874 363.0
HKD3_k127_5355593_1 PFAM fumarate reductase succinate dehydrogenase flavoprotein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004379 334.0
HKD3_k127_5367562_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004858 617.0
HKD3_k127_5367562_1 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002144 486.0
HKD3_k127_5367562_2 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002402 359.0
HKD3_k127_5367562_3 PFAM Stage II sporulation K06381 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001208 269.0
HKD3_k127_5367562_4 Preprotein translocase subunit K03210 - - 0.00000000000000000000000000002275 121.0
HKD3_k127_540698_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.0 1024.0
HKD3_k127_540698_1 4-alpha-glucanotransferase K00705 - 2.4.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004341 569.0
HKD3_k127_540698_2 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 - - - 0.00000000000000000000000000000000000000000007516 171.0
HKD3_k127_540698_3 binding domain protein - - - 0.000000000000000000000000001669 119.0
HKD3_k127_5429682_0 Amidohydrolase family K01464,K01466 - 3.5.2.2,3.5.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004488 298.0
HKD3_k127_5429682_1 acetyl coenzyme A synthetase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001605 280.0
HKD3_k127_5429682_2 3-demethylubiquinone-9 3-O-methyltransferase activity K00568,K20444 - 2.1.1.222,2.1.1.64 0.0000000000000000000000000000000000000000000000000000000000000000000002013 249.0
HKD3_k127_5454148_0 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003644 411.0
HKD3_k127_5454148_1 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001422 367.0
HKD3_k127_5454148_2 ABC-type dipeptide transport system, periplasmic component K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001978 299.0
HKD3_k127_5454148_3 ABC transporter K15583 - - 0.00000000000000000000000000000000000000000000000182 178.0
HKD3_k127_5454148_4 cell differentiation - GO:0002244,GO:0002376,GO:0002520,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0005886,GO:0007275,GO:0008022,GO:0008150,GO:0009266,GO:0009605,GO:0009628,GO:0009649,GO:0009987,GO:0010378,GO:0016020,GO:0030097,GO:0030154,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0042752,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0048513,GO:0048534,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050896,GO:0065007,GO:0070013,GO:0071944 - 0.0005623 44.0
HKD3_k127_5475330_0 PFAM Alcohol dehydrogenase GroES-like domain K00008 - 1.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000002653 265.0
HKD3_k127_5475330_1 3-hydroxyanthranilate 3,4-dioxygenase activity - - - 0.00000000000000000000000000000000000000000000000000005066 188.0
HKD3_k127_5475330_2 PFAM EamA-like transporter family - - - 0.00000000000000000000000000000000000000008597 159.0
HKD3_k127_5503620_0 Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008976 416.0
HKD3_k127_5503620_1 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002481 354.0
HKD3_k127_5503620_2 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003439 332.0
HKD3_k127_5503620_3 radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001002 258.0
HKD3_k127_5503620_4 Haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000159 216.0
HKD3_k127_5503620_5 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000000001632 163.0
HKD3_k127_551191_0 PFAM pyruvate ferredoxin flavodoxin oxidoreductase K00172 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000001232 243.0
HKD3_k127_551191_1 Pyruvate:ferredoxin oxidoreductase core domain II K00169 - 1.2.7.1 0.00000000000000000000000000000000000000000000000000000000000000000008878 234.0
HKD3_k127_551191_2 4Fe-4S dicluster domain K00171 - 1.2.7.1 0.0000000000000000000000000000000000000000008816 159.0
HKD3_k127_5516112_0 PFAM glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001419 295.0
HKD3_k127_5516112_1 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000003182 188.0
HKD3_k127_5516112_2 PFAM glycosyl transferase family 9 K02843 - - 0.000000000000000000000000000000000000000001191 171.0
HKD3_k127_5516112_3 glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000001221 171.0
HKD3_k127_5516112_4 -O-antigen K02847 - - 0.00000000000000000000000000000000002824 149.0
HKD3_k127_5516112_5 Nucleotidyl transferase K00973 - 2.7.7.24 0.000000000000000149 79.0
HKD3_k127_5516112_6 Glycosyltransferase Family 4 K02844 - - 0.0000000000001018 74.0
HKD3_k127_5545510_0 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003865 608.0
HKD3_k127_5545510_1 PFAM Nitroreductase - - - 0.00000000000000000000000000000000000000000000000000000000001015 216.0
HKD3_k127_5545510_2 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567,K10778 - 2.1.1.63 0.000000000000000000000000000017 127.0
HKD3_k127_5545510_3 Smr protein MutS2 - - - 0.000000000002113 72.0
HKD3_k127_5549249_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657,K13503 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004641 555.0
HKD3_k127_5549249_1 TIGRFAM glutamine amidotransferase of anthranilate synthase K01658,K01664 - 2.6.1.85,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 308.0
HKD3_k127_5549249_2 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18,4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002904 269.0
HKD3_k127_5551124_0 Bacterial protein of unknown function (DUF853) K06915 - - 4.215e-229 717.0
HKD3_k127_5551124_1 ABC transporter K06158 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001703 463.0
HKD3_k127_5551124_2 Protein of unknown function (DUF4065) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004041 246.0
HKD3_k127_5551124_3 - - - - 0.00000000000000000000000000001179 122.0
HKD3_k127_5551124_4 - - - - 0.0000000000000003113 83.0
HKD3_k127_5551124_5 CoA binding domain K01905,K22224 - 6.2.1.13 0.000000000003539 69.0
HKD3_k127_5570050_0 NAD binding K00058,K04496 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000006491 160.0
HKD3_k127_5570050_1 DUF based on E. rectale Gene description (DUF3880) - - - 0.0004561 52.0
HKD3_k127_557430_0 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003587 319.0
HKD3_k127_557430_1 Glycosyltransferase family 9 (heptosyltransferase) K02841 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000413 314.0
HKD3_k127_557430_2 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.000000000000000000000000000000000000000000000000000000000000000000000000000005008 272.0
HKD3_k127_557430_3 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002026 266.0
HKD3_k127_557430_4 Bacterial lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.00000000000000000000000000000000000000000000000000000000000000000000000000005259 268.0
HKD3_k127_557430_5 Polynucleotide kinase 3 phosphatase K03273 - 3.1.3.82,3.1.3.83 0.000000000000000000000000000000000000000000000000000004404 198.0
HKD3_k127_557430_6 PFAM glycosyl transferase, family 9 K02849 - - 0.0000000000000000000000000000007886 128.0
HKD3_k127_557430_7 Belongs to the UPF0434 family K09791 - - 0.00000000000000000002527 91.0
HKD3_k127_5601309_0 elongation factor Tu domain 2 protein K02355 - - 2.823e-264 830.0
HKD3_k127_5601309_1 Phage integrase, N-terminal SAM-like domain K03733,K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009117 317.0
HKD3_k127_5601309_2 PFAM MOSC domain - - - 0.00000000000000000000000000000000000000000000000000000000000004975 218.0
HKD3_k127_5601309_3 TIGRFAM molybdenum cofactor synthesis domain - - - 0.0000000000000000000000000000000000000000000000000000000002915 209.0
HKD3_k127_5601309_4 - - - - 0.00000000000000000000000000000008456 132.0
HKD3_k127_5629351_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 3.289e-295 919.0
HKD3_k127_5629351_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 348.0
HKD3_k127_5629351_2 TspO/MBR family K05770 GO:0003674,GO:0005488,GO:0005575,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016021,GO:0031224,GO:0033013,GO:0044237,GO:0044425,GO:0046483,GO:0046906,GO:0071704,GO:0097159,GO:1901360,GO:1901363,GO:1901564 - 0.0000000000000000000000000000000000000000000000000000004875 196.0
HKD3_k127_5629351_3 Pfam Pyridoxamine 5'-phosphate - - - 0.000000000000000000000000000000000000000002583 159.0
HKD3_k127_5629351_4 Pyridoxamine 5'-phosphate oxidase - - - 0.00000000000000000000000000000000001273 140.0
HKD3_k127_5629351_5 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000007456 128.0
HKD3_k127_5629351_6 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000003544 128.0
HKD3_k127_5629351_7 Iron hydrogenase small subunit K00123,K00336,K18332 - 1.12.1.3,1.17.1.9,1.6.5.3 0.00000000000000000000000005109 110.0
HKD3_k127_5629351_8 Domain of unknown function (DUF1731) K07071 - - 0.0000000000000001782 81.0
HKD3_k127_5629351_9 PFAM FAD binding domain of DNA photolyase K01669 - 4.1.99.3 0.00008782 48.0
HKD3_k127_5629684_0 Domain of Unknown Function (DUF748) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002138 399.0
HKD3_k127_5629684_1 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003084 366.0
HKD3_k127_5629684_2 Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily K03976 - - 0.0000000000000000000000002026 112.0
HKD3_k127_5630825_0 Catalyzes the carbon skeleton rearrangement of L- glutamate to L-threo-3-methylaspartate ((2S,3S)-3- methylaspartate) K19268 - 5.4.99.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005923 467.0
HKD3_k127_5671878_0 DEAD DEAH box helicase K06877 - - 0.0 1022.0
HKD3_k127_5671878_1 Catalyzes the oxidative sulfurization of hercynine (N- alpha,N-alpha,N-alpha-trimethyl-L-histidine) into hercynyl-gamma- L-glutamyl-L-cysteine sulfoxide, a step in the biosynthesis pathway of ergothioneine - GO:0003674,GO:0003824,GO:0005488,GO:0005507,GO:0005509,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016667,GO:0016670,GO:0018158,GO:0019538,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0046872,GO:0046914,GO:0055114,GO:0071704,GO:0120147,GO:1901564,GO:1903135 - 0.00000000000000000000000000000000000000000000007616 175.0
HKD3_k127_5671878_2 PIN domain - - - 0.000000000000000000000000000000000000000005867 158.0
HKD3_k127_5671878_3 Bacterial transcriptional activator domain - - - 0.00000000000000002238 87.0
HKD3_k127_5671878_4 positive regulation of growth - - - 0.000000000000005631 78.0
HKD3_k127_567206_0 PFAM UDP-glucose GDP-mannose dehydrogenase K02474,K13015 - 1.1.1.136 5.507e-287 899.0
HKD3_k127_567206_1 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003012 477.0
HKD3_k127_567206_2 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 458.0
HKD3_k127_567206_3 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002909 366.0
HKD3_k127_567206_4 Polysaccharide biosynthesis protein K00067 - 1.1.1.133 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001221 278.0
HKD3_k127_567206_5 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001059 250.0
HKD3_k127_567206_6 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 - 5.1.3.13 0.00000000000000000000000000000000000000000000000000000000000000000001402 240.0
HKD3_k127_5706450_0 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008603 419.0
HKD3_k127_5706450_1 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002378 319.0
HKD3_k127_5706450_10 Belongs to the universal ribosomal protein uL29 family K02904 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000002034 71.0
HKD3_k127_5706450_11 One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02895 - - 0.0000006143 52.0
HKD3_k127_5706450_2 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000004547 222.0
HKD3_k127_5706450_3 One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome K02926 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000003662 221.0
HKD3_k127_5706450_4 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000008181 208.0
HKD3_k127_5706450_5 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.00000000000000000000000000000000000000008638 153.0
HKD3_k127_5706450_6 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000217 139.0
HKD3_k127_5706450_7 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000001964 122.0
HKD3_k127_5706450_8 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.00000000000000000000001191 106.0
HKD3_k127_5706450_9 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.00000000000000000000001933 101.0
HKD3_k127_5741145_0 Branched-chain amino acid transport system / permease component K01997,K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000212 391.0
HKD3_k127_5741145_1 ABC transporter K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000269 334.0
HKD3_k127_5741145_2 ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004462 261.0
HKD3_k127_5741145_3 with different specificities (related to short-chain alcohol - - - 0.000000000000000000000000000000000000000000000000003035 191.0
HKD3_k127_5745625_0 Aminopeptidase I zinc metalloprotease (M18) K01267 - 3.4.11.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001357 527.0
HKD3_k127_5745625_1 PFAM Peptidase family S58 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009941 355.0
HKD3_k127_5745625_2 Belongs to the FPP GGPP synthase family K02523,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000297 340.0
HKD3_k127_5745625_3 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000000000000000003014 228.0
HKD3_k127_5745625_4 Single-strand binding protein family K03111 - - 0.0000000000000000000000000000000000000000000001533 171.0
HKD3_k127_5757559_0 Belongs to the aldehyde dehydrogenase family K00128,K22187 - 1.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001507 474.0
HKD3_k127_5778592_0 amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000903 378.0
HKD3_k127_5778592_1 ABC-type branched-chain amino acid transport systems ATPase component K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001952 313.0
HKD3_k127_5778592_2 Signal transduction histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000007253 220.0
HKD3_k127_5781372_0 Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 5.846e-262 819.0
HKD3_k127_5781372_1 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 312.0
HKD3_k127_5781372_2 Mo-molybdopterin cofactor metabolic process - - - 0.000000001775 61.0
HKD3_k127_581149_0 acetyl coenzyme A synthetase - - - 0.000000000000000000000000000000000000000000000000000000000000000001023 240.0
HKD3_k127_5826493_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002485 459.0
HKD3_k127_5826493_1 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006394 317.0
HKD3_k127_5826493_2 Metallopeptidase family M24 K01265 - 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 316.0
HKD3_k127_5826493_3 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000462 265.0
HKD3_k127_5826493_4 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000011 202.0
HKD3_k127_5826493_5 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000001162 179.0
HKD3_k127_5826493_6 PFAM ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000006556 162.0
HKD3_k127_5826493_7 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877 - 0.0000000000000000000000000000000006363 137.0
HKD3_k127_5826493_8 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.000000000002419 68.0
HKD3_k127_587218_0 PFAM aspartate glutamate uridylate kinase K00928 - 2.7.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008994 309.0
HKD3_k127_587218_1 ComEA protein K02237 - - 0.00000000000000000000454 100.0
HKD3_k127_587218_2 sequence-specific DNA binding - - - 0.000000000000000102 81.0
HKD3_k127_5880782_0 ABC transporter K02017,K06857 - 3.6.3.29,3.6.3.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 420.0
HKD3_k127_5880782_1 protein related to deoxyribodipyrimidine photolyase K06876 GO:0000166,GO:0000719,GO:0003674,GO:0003824,GO:0003913,GO:0003914,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006290,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016830,GO:0033554,GO:0034641,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0050896,GO:0051536,GO:0051539,GO:0051540,GO:0051716,GO:0071704,GO:0071949,GO:0090304,GO:0097159,GO:0140097,GO:1901265,GO:1901360,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 364.0
HKD3_k127_5880782_2 Binding-protein-dependent transport system inner membrane component K05773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008341 337.0
HKD3_k127_5880782_3 Prolyl-tRNA synthetase - - - 0.0000000000000000000000000000000000000000000000000001848 190.0
HKD3_k127_5880782_4 (GNAT) family - - - 0.00000000000000000000000000000000000000001251 157.0
HKD3_k127_5880782_5 - - - - 0.000000004104 62.0
HKD3_k127_5880782_6 Helix-turn-helix domain protein - - - 0.0000000642 61.0
HKD3_k127_5903214_0 Peptidase family M20/M25/M40 K01439 - 3.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009737 346.0
HKD3_k127_5903214_1 Belongs to the LarC family K09121 - 4.99.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000001751 264.0
HKD3_k127_5908097_0 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 6.988e-217 681.0
HKD3_k127_5908097_1 Major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000027 300.0
HKD3_k127_5908097_2 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000001057 217.0
HKD3_k127_5922191_0 Tripartite ATP-independent periplasmic transporter, DctM component K11690 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002517 313.0
HKD3_k127_5922191_1 KR domain K00059,K07535 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001213 276.0
HKD3_k127_5922191_2 beta-lactamase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000003259 245.0
HKD3_k127_5983186_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 300.0
HKD3_k127_5983186_1 PFAM Sterol-binding domain protein - - - 0.0000000001437 66.0
HKD3_k127_5983186_2 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000007645 51.0
HKD3_k127_6045903_0 AcrB/AcrD/AcrF family - - - 1.749e-305 968.0
HKD3_k127_6045903_1 major facilitator superfamily K18926 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007023 368.0
HKD3_k127_6045903_2 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003858 307.0
HKD3_k127_6045903_3 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000209 186.0
HKD3_k127_6045903_4 PFAM HlyD family secretion protein K03543 - - 0.0000000000000000000000000000000000000000000000001568 193.0
HKD3_k127_6045903_5 Biotin-lipoyl like K02005,K03585,K18306 - - 0.00000000000000000000000000000000000000002031 169.0
HKD3_k127_6045903_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000003452 126.0
HKD3_k127_6057277_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 5.01e-277 872.0
HKD3_k127_6057277_1 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 9.004e-195 630.0
HKD3_k127_6057277_10 Cna B domain protein - - - 0.000000000000000000000000000000006125 146.0
HKD3_k127_6057277_11 - - - - 0.0000000000000000000004678 102.0
HKD3_k127_6057277_12 Putative regulatory protein - - - 0.00000000001709 69.0
HKD3_k127_6057277_2 DALR_2 K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000232 612.0
HKD3_k127_6057277_3 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005297 600.0
HKD3_k127_6057277_4 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005747 507.0
HKD3_k127_6057277_5 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 300.0
HKD3_k127_6057277_6 40-residue YVTN family beta-propeller - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005371 280.0
HKD3_k127_6057277_7 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001061 255.0
HKD3_k127_6057277_8 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.00000000000000000000000000000000000000000000000009958 191.0
HKD3_k127_6057277_9 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.0000000000000000000000000000000001643 135.0
HKD3_k127_6060053_0 Tripartite tricarboxylate transporter TctA family K07793 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002521 597.0
HKD3_k127_6060053_1 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001038 289.0
HKD3_k127_6060053_2 - - - - 0.00000000000000001139 87.0
HKD3_k127_6060053_3 PFAM MmgE PrpD - - - 0.0000000000005289 72.0
HKD3_k127_6060053_4 Tripartite tricarboxylate transporter TctB family - - - 0.00000009391 60.0
HKD3_k127_6072922_0 Molybdopterin oxidoreductase Fe4S4 domain - - - 2.029e-255 808.0
HKD3_k127_6072922_1 amidase activity K01426,K02433 - 3.5.1.4,6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 437.0
HKD3_k127_6072922_2 ATPases associated with a variety of cellular activities K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008181 271.0
HKD3_k127_6072922_3 M42 glutamyl aminopeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001432 253.0
HKD3_k127_6072922_4 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.0000000000000000000000000000000000000000000000000001931 191.0
HKD3_k127_6072922_5 4 iron, 4 sulfur cluster binding K00124 - - 0.0000000000000000000000000001525 123.0
HKD3_k127_6100250_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.0 1016.0
HKD3_k127_6100250_1 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005848 539.0
HKD3_k127_6100250_2 B12 binding domain K01849 - 5.4.99.2 0.00000000000000000000000000000000000000000000000000000000001333 209.0
HKD3_k127_6100250_3 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.000000000000000000000000000000000000000000000000001072 191.0
HKD3_k127_6100250_4 LigT like Phosphoesterase K01975 - 3.1.4.58 0.000000000000000000000000000000000000000000009889 169.0
HKD3_k127_6100250_5 TIGRFAM methylmalonyl-CoA mutase, large subunit K01848 - 5.4.99.2 0.000000000001224 68.0
HKD3_k127_6100250_6 Modulates RecA activity K03565 - - 0.000000003043 64.0
HKD3_k127_6104087_0 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000002649 248.0
HKD3_k127_6104087_1 Belongs to the phosphoglycerate mutase family K02226,K22305 - 3.1.3.3,3.1.3.73 0.00000000000000000000000000000000000000000001342 170.0
HKD3_k127_6104087_2 DivIVA protein K04074 - - 0.000000000000000000000000000191 121.0
HKD3_k127_6104087_3 PFAM CutA1 divalent ion tolerance protein K03926 - - 0.0000000000000000003272 91.0
HKD3_k127_6104087_4 DUF167 K09131 - - 0.000000000000000009535 85.0
HKD3_k127_6104087_5 Protein of unknown function (DUF721) - - - 0.0000000000003973 77.0
HKD3_k127_6104087_6 - - - - 0.00000000007154 69.0
HKD3_k127_6119817_0 PFAM acyl-CoA dehydrogenase domain protein K00249,K11731 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 473.0
HKD3_k127_6119817_1 III protein, CoA-transferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002297 402.0
HKD3_k127_6119817_2 glycosyl transferase family 2 K10211 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 307.0
HKD3_k127_6119817_3 carotenoid biosynthetic process K10212 - - 0.00000000000000000000000000000000000002244 151.0
HKD3_k127_6119817_4 PFAM ABC transporter related K01990 - - 0.000000000000718 69.0
HKD3_k127_6119817_5 - - - - 0.000002439 51.0
HKD3_k127_6121807_0 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002344 517.0
HKD3_k127_6121807_1 Sigma-54 factor, Activator interacting domain (AID) K03092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003223 516.0
HKD3_k127_6121807_10 PFAM phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02806 - - 0.000000000000000000000000000000000000000000000353 175.0
HKD3_k127_6121807_11 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.0000000000000000000000000000000000000000001728 169.0
HKD3_k127_6121807_12 TIGRFAM 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 - 3.1.3.45 0.0000000000000000000000000000000000002232 145.0
HKD3_k127_6121807_13 PTS system fructose IIA component K02793 - 2.7.1.191 0.0000000000000000000000000000000000003371 145.0
HKD3_k127_6121807_14 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.000000000000000000000000000000000002751 147.0
HKD3_k127_6121807_15 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane K09774 - - 0.00000000000000000000000000000001069 134.0
HKD3_k127_6121807_16 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.00000000000000000000000000000002759 132.0
HKD3_k127_6121807_17 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.00000000000000000006552 94.0
HKD3_k127_6121807_18 Bacterial protein of unknown function (DUF883) - - - 0.00000000000000000119 91.0
HKD3_k127_6121807_19 YqjK-like protein - - - 0.00000000000003779 76.0
HKD3_k127_6121807_2 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001662 428.0
HKD3_k127_6121807_20 Lipopolysaccharide-assembly, LptC-related - - - 0.000002617 57.0
HKD3_k127_6121807_3 RNB K01147,K12573 - 3.1.13.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002097 438.0
HKD3_k127_6121807_4 Catalyzes the conversion of dihydroorotate to orotate K00254,K02823,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007813 371.0
HKD3_k127_6121807_5 PFAM ABC transporter related K06861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003673 330.0
HKD3_k127_6121807_6 Displays ATPase and GTPase activities K06958 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001772 292.0
HKD3_k127_6121807_7 PFAM Adenosine specific kinase K09129 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002232 250.0
HKD3_k127_6121807_8 Oxidoreductase NAD-binding domain K02823 - - 0.0000000000000000000000000000000000000000000000000000000001658 215.0
HKD3_k127_6121807_9 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 - - 0.0000000000000000000000000000000000000000000000000001393 190.0
HKD3_k127_6124851_0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00335 - 1.6.5.3 1.278e-258 811.0
HKD3_k127_6124851_1 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.00000000000000000000000000000000000000000000000008797 184.0
HKD3_k127_6124851_2 hydrogenase, Fe-only - - - 0.0000000000000001078 80.0
HKD3_k127_6128135_0 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 407.0
HKD3_k127_6128135_1 TIGRFAM LPPG domain K11212 - 2.7.8.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007338 348.0
HKD3_k127_6128135_2 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11779,K11784 - 1.21.98.1,2.5.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003984 297.0
HKD3_k127_6128135_3 F420-0:Gamma-glutamyl ligase K12234 - 6.3.2.31,6.3.2.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000811 283.0
HKD3_k127_6128135_4 COG1593 TRAP-type C4-dicarboxylate transport system, large permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000001642 239.0
HKD3_k127_6128135_5 Elongator protein 3 MiaB NifB K11779 - 2.5.1.77 0.000000000000000000000000000000000000000000000000000000000000000002849 240.0
HKD3_k127_6128135_6 Nitroreductase family - - - 0.000000000000000000000000000000000000002711 153.0
HKD3_k127_6128135_7 PFAM NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.00000000000000000000000000000007643 130.0
HKD3_k127_6128135_8 Guanylyltransferase that catalyzes the activation of 2- phospho-L-lactate (LP) as (2S)-lactyl-2-diphospho-5'-guanosine (LPPG), via the condensation of LP with GTP. Is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor K14941 - 2.7.7.68 0.000000000000000000000000001438 120.0
HKD3_k127_6128135_9 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000002643 80.0
HKD3_k127_6156437_0 TIGRFAM TRAP transporter, 4TM 12TM fusion protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 495.0
HKD3_k127_6156437_1 TIGRFAM TRAP transporter solute receptor, TAXI family K07080 - - 0.000000000000002155 78.0
HKD3_k127_6165926_0 peptidyl-lysine modification to peptidyl-hypusine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001644 368.0
HKD3_k127_6165926_1 Xylose isomerase-like TIM barrel - - - 0.00000000000000000000000000000000000000000000000000000000000000002348 237.0
HKD3_k127_6165926_2 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.0000000000000000000000000000000000000000000000000000000003137 206.0
HKD3_k127_6165926_3 Protein of unknown function (DUF3426) - - - 0.000000000000000000000002068 109.0
HKD3_k127_6176615_0 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000000000000000004519 209.0
HKD3_k127_6176615_1 - - - - 0.00000000000000000000000000000000000000000000000007343 184.0
HKD3_k127_6176615_2 PFAM L-carnitine dehydratase bile acid-inducible protein F K18702 - 2.8.3.19 0.000000000000000000000000000000000000000000000007977 176.0
HKD3_k127_6176615_3 Pyridine nucleotide-disulphide oxidoreductase - - - 0.0000000000000000000000000000000000000336 158.0
HKD3_k127_6183271_0 HMGL-like K01640 - 4.1.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009742 545.0
HKD3_k127_6183271_1 Isochorismatase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001225 244.0
HKD3_k127_6183271_2 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.00000000000000000000000000000000000005749 150.0
HKD3_k127_6183271_3 C4-dicarboxylate ABC transporter - - - 0.00000000000000000000000000000007792 129.0
HKD3_k127_6202986_0 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 2.076e-261 815.0
HKD3_k127_6202986_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K05825 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002512 376.0
HKD3_k127_6202986_2 PFAM pyruvate ferredoxin flavodoxin oxidoreductase K00180 - 1.2.7.8 0.00000000000000000000000000000000000000000000000000000003813 207.0
HKD3_k127_6202986_3 PFAM Asp Glu hydantoin racemase K16841 - 5.1.99.3 0.0000000000000008517 81.0
HKD3_k127_6207944_0 PFAM Nitrate reductase gamma subunit K00374 - 1.7.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002497 437.0
HKD3_k127_6207944_1 4Fe-4S ferredoxin, iron-sulfur binding - - - 0.000000000000000000000000000000000006065 139.0
HKD3_k127_6207944_2 RsbT co-antagonist protein rsbRD N-terminal domain - - - 0.00001041 48.0
HKD3_k127_6209566_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005323 427.0
HKD3_k127_6209566_1 Tripartite tricarboxylate transporter TctB family - - - 0.0000007958 57.0
HKD3_k127_6210354_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 2061.0
HKD3_k127_6210354_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 1582.0
HKD3_k127_6210354_2 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002694 334.0
HKD3_k127_6210354_3 Participates in transcription elongation, termination and antitermination K02601 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001367 248.0
HKD3_k127_6210354_4 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.00000000000000000000000000000000000000000000000000000000000000000001114 236.0
HKD3_k127_6210354_5 Ribosomal protein L7/L12 dimerisation domain K02935 - - 0.00000000000000000000000000000000000000000002084 164.0
HKD3_k127_6210354_6 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.0000000000000000000000000000000000402 139.0
HKD3_k127_6210354_7 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.000000000000000000001441 94.0
HKD3_k127_6210354_8 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.00000000000007417 74.0
HKD3_k127_621501_0 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 369.0
HKD3_k127_621501_1 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 351.0
HKD3_k127_621501_2 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004677 320.0
HKD3_k127_621501_3 COG0767 ABC-type transport system involved in resistance to organic solvents, permease component K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002185 301.0
HKD3_k127_621501_4 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 295.0
HKD3_k127_621501_5 Tfp pilus assembly protein FimV - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006386 291.0
HKD3_k127_621501_6 MlaD protein K02067 - - 0.00000000000000000000000000000000000000000000000000000000003328 222.0
HKD3_k127_621501_7 Belongs to the GARS family K01945 - 6.3.4.13 0.000000000000000000002043 95.0
HKD3_k127_621501_8 DNA integration - - - 0.0000000001006 62.0
HKD3_k127_621501_9 cell differentiation - GO:0002244,GO:0002376,GO:0002520,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0005886,GO:0007275,GO:0008022,GO:0008150,GO:0009266,GO:0009605,GO:0009628,GO:0009649,GO:0009987,GO:0010378,GO:0016020,GO:0030097,GO:0030154,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0042752,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0048513,GO:0048534,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050896,GO:0065007,GO:0070013,GO:0071944 - 0.00009764 46.0
HKD3_k127_6235673_0 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001324 450.0
HKD3_k127_6235673_1 PFAM ATP-binding region, ATPase domain protein K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004641 313.0
HKD3_k127_6235673_2 Transcriptional regulatory protein, C terminal K07658 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007392 258.0
HKD3_k127_6235673_3 TIGRFAM phosphate binding protein K02040 - - 0.000000000000000000000000000000000000000000000000000000000000000000000167 246.0
HKD3_k127_6235673_4 ATPase-coupled phosphate ion transmembrane transporter activity K02036 GO:0003674,GO:0003824,GO:0005215,GO:0006810,GO:0006811,GO:0006817,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015114,GO:0015318,GO:0015399,GO:0015405,GO:0015415,GO:0015698,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0034220,GO:0035435,GO:0042623,GO:0042626,GO:0043225,GO:0043492,GO:0051179,GO:0051234,GO:0055085,GO:0098656,GO:0098660,GO:0098661,GO:0099133 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000003604 219.0
HKD3_k127_6235673_5 Type II and III secretion system protein K02453 - - 0.00000000000000000000000000000000000000000000000000000000033 218.0
HKD3_k127_6248987_0 Thiamine-phosphate synthase K00941,K14153,K21219 - 2.5.1.3,2.7.1.49,2.7.4.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004371 428.0
HKD3_k127_6248987_1 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003965 417.0
HKD3_k127_6248987_10 TonB C terminal K03832 - - 0.0000000000000000000000197 114.0
HKD3_k127_6248987_11 ThiS family - - - 0.0000000008766 63.0
HKD3_k127_6248987_2 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201 386.0
HKD3_k127_6248987_3 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003006 322.0
HKD3_k127_6248987_4 PFAM MotA TolQ ExbB proton channel K03562 - - 0.0000000000000000000000000000000000000000000000000000000000000000000009255 245.0
HKD3_k127_6248987_5 mRNA catabolic process - - - 0.000000000000000000000000000000000000000000000000006035 192.0
HKD3_k127_6248987_6 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.00000000000000000000000000000000000004493 156.0
HKD3_k127_6248987_7 Biopolymer transport protein ExbD/TolR K03560 - - 0.0000000000000000000000000000000000007801 144.0
HKD3_k127_6248987_8 PFAM OmpA MotB domain protein K03640 - - 0.000000000000000000000001393 110.0
HKD3_k127_6248987_9 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.00000000000000000000000804 111.0
HKD3_k127_625184_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 2.652e-241 752.0
HKD3_k127_625184_1 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000000000000003598 121.0
HKD3_k127_625184_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.000000000009201 65.0
HKD3_k127_6253312_0 Conserved protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002337 388.0
HKD3_k127_6253312_1 NADPH-dependent FMN reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002882 291.0
HKD3_k127_6253312_2 Methyltransferase small domain K15460 - 2.1.1.223 0.000000000000000000000000000000000000000000000000000000000005039 216.0
HKD3_k127_6253312_3 PIN domain K19686 - - 0.000000000000000000000000000000000000000009273 158.0
HKD3_k127_6253312_4 ACT domain - - - 0.000000000000000000000000000006236 124.0
HKD3_k127_6253312_5 toxin-antitoxin pair type II binding - - - 0.000000000000000000000000009627 112.0
HKD3_k127_6253312_6 SCP-2 sterol transfer family - - - 0.0000000000000000004603 100.0
HKD3_k127_6253312_7 (Rhomboid) family K07059 - - 0.000000000000000005761 87.0
HKD3_k127_6253312_8 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000005413 72.0
HKD3_k127_6258584_0 Peptidase family M41 K03798 - - 2.132e-296 920.0
HKD3_k127_6258584_1 Belongs to the ClpX chaperone family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008221 580.0
HKD3_k127_6258584_2 PFAM Acyl-CoA dehydrogenase K19066,K19067 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016491,GO:0016627,GO:0022607,GO:0036094,GO:0043167,GO:0043168,GO:0043933,GO:0044085,GO:0048037,GO:0050660,GO:0050662,GO:0051259,GO:0051262,GO:0052890,GO:0055114,GO:0065003,GO:0071840,GO:0097159,GO:1901265,GO:1901363 1.3.8.10,1.3.8.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000236 507.0
HKD3_k127_6258584_3 Aminotransferase class-V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003992 447.0
HKD3_k127_6258584_4 heat shock protein DnaJ domain protein K03686,K05516 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001936 357.0
HKD3_k127_6258584_5 NUDIX domain - - - 0.000000000000000000000000000000000000000000000000000009616 195.0
HKD3_k127_6258584_6 Belongs to the HpcH HpaI aldolase family K01644,K18292 - 4.1.3.25,4.1.3.34 0.00000000000000000000000000000000000000005642 153.0
HKD3_k127_6270403_0 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000381 314.0
HKD3_k127_6270403_1 PFAM cell wall hydrolase autolysin K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000008404 267.0
HKD3_k127_6270403_2 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 K03738 - 1.2.7.5 0.000000000000000001521 89.0
HKD3_k127_6270403_3 Protein of unknown function (DUF1847) - - - 0.0000006355 52.0
HKD3_k127_6295698_0 Fumarate reductase flavoprotein C-term - - - 1.193e-246 771.0
HKD3_k127_6295698_1 elongation factor Tu domain 2 protein K06207 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008235 600.0
HKD3_k127_6295698_2 Pyridine nucleotide-disulphide oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000811 517.0
HKD3_k127_6295698_3 carbohydrate transport K02027,K17244 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003981 442.0
HKD3_k127_6295698_4 Binding-protein-dependent transport system inner membrane component K02026 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004622 391.0
HKD3_k127_6295698_5 ABC-type sugar transport systems permease components K02025,K10118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004075 361.0
HKD3_k127_6295698_6 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002056 323.0
HKD3_k127_6295698_7 Glucosamine-6-phosphate isomerase K01057,K02564 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 3.1.1.31,3.5.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000001151 251.0
HKD3_k127_6295698_8 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000001032 236.0
HKD3_k127_6295698_9 GntR family transcriptional regulator K03486,K03710 - - 0.00000000000000000000000000000006616 135.0
HKD3_k127_633723_0 PFAM pyruvate flavodoxin ferredoxin oxidoreductase domain protein K00174 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001324 339.0
HKD3_k127_633723_1 Iron-containing alcohol dehydrogenase K00005 - 1.1.1.6 0.0000000000000000000000000000000000000000000000000000000000000005464 232.0
HKD3_k127_633723_2 PFAM Pyruvate K00177 - 1.2.7.3 0.000000000000000000000000000000000000000000000000706 180.0
HKD3_k127_633723_3 binding domain, Protein - - - 0.0000000000000000000000000001032 120.0
HKD3_k127_6349006_0 PFAM FAD linked oxidase domain protein K00102,K00104 - 1.1.2.4,1.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003349 519.0
HKD3_k127_6349006_1 4Fe-4S dicluster domain K11473 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 398.0
HKD3_k127_6349006_2 Transglycosylase SLT domain K08305 - - 0.00000000000000000000000000000000000000000000000000000000000000000000006345 251.0
HKD3_k127_6349006_3 metal cluster binding - - - 0.000000000000000000000000000000000000000000000000001113 190.0
HKD3_k127_6349006_4 PFAM FAD linked oxidase domain protein K11472 - - 0.000000000000000000000000000000000000000002664 171.0
HKD3_k127_6349006_5 ThiF family K03148 - 2.7.7.73 0.000000000000000000000002182 105.0
HKD3_k127_6349006_6 Anaerobic ribonucleoside-triphosphate reductase K21636 - 1.1.98.6 0.0000004241 55.0
HKD3_k127_6372351_0 Beta-Casp domain K07576 - - 1.501e-237 744.0
HKD3_k127_6379729_0 Amidase - - - 2.058e-202 640.0
HKD3_k127_6379729_1 PFAM Acyl-CoA dehydrogenase K09456 - - 7.138e-197 632.0
HKD3_k127_6379729_2 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002821 400.0
HKD3_k127_6379729_3 Phage integrase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009217 383.0
HKD3_k127_6379729_4 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000000001004 222.0
HKD3_k127_6379729_5 PFAM Methyltransferase type - - - 0.0000000000000000000000000000000000000000004589 166.0
HKD3_k127_6379729_6 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.000000000000000000000000000000001691 136.0
HKD3_k127_6379729_7 EamA-like transporter family K08978 - - 0.0000000000000000000000000000005887 127.0
HKD3_k127_6381009_0 PFAM Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 430.0
HKD3_k127_6381009_1 Belongs to the alkaline phosphatase family K01077 - 3.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001639 320.0
HKD3_k127_638510_0 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 391.0
HKD3_k127_638510_1 HlyD family secretion protein K01993 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009557 289.0
HKD3_k127_638510_2 MltA specific insert domain K08304 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002219 271.0
HKD3_k127_638510_3 succinate dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000184 215.0
HKD3_k127_638510_4 ABC transporter - - - 0.000000000000000000000000000000000000000000000001596 178.0
HKD3_k127_6390825_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 9.598e-256 819.0
HKD3_k127_6390825_1 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004654,GO:0005488,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 6.433e-249 788.0
HKD3_k127_6390825_10 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23 0.00000000000000000000000000000000000000000000000000000155 197.0
HKD3_k127_6390825_11 Insulinase (Peptidase family M16) - - - 0.00000000000000000000000000000000000000000000000001424 186.0
HKD3_k127_6390825_12 DEAD DEAH box helicase K03654 - 3.6.4.12 0.0000000000000000000000000000000000000003928 155.0
HKD3_k127_6390825_13 Required for maturation of 30S ribosomal subunits K09748 - - 0.0000000000000000000000000000000000000008973 152.0
HKD3_k127_6390825_14 Ribosomal_S15 K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000001765 137.0
HKD3_k127_6390825_15 regulatory protein, FmdB family - - - 0.000000000000000000000003589 104.0
HKD3_k127_6390825_16 Protein of unknown function (DUF503) K09764 - - 0.00000000000000000000002622 102.0
HKD3_k127_6390825_17 - - - - 0.00000000000000000000002997 105.0
HKD3_k127_6390825_18 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.0000000000000000001011 94.0
HKD3_k127_6390825_2 Participates in both transcription termination and antitermination K02600 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001422 484.0
HKD3_k127_6390825_3 PFAM phosphoesterase, RecJ domain protein K06881 - 3.1.13.3,3.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001383 286.0
HKD3_k127_6390825_4 PFAM SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004666 279.0
HKD3_k127_6390825_5 Transposase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004677 273.0
HKD3_k127_6390825_6 Poly A polymerase head domain K00970,K00974,K07276,K19545 - 2.7.7.19,2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000001466 258.0
HKD3_k127_6390825_7 PFAM peptidase M16 domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000001935 241.0
HKD3_k127_6390825_8 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.000000000000000000000000000000000000000000000000000000000000000005741 241.0
HKD3_k127_6390825_9 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP) K06153 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000004129 227.0
HKD3_k127_6398155_0 Pyruvate:ferredoxin oxidoreductase core domain II K00169 - 1.2.7.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006993 461.0
HKD3_k127_6398155_1 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03770 - 5.2.1.8 0.000000000000000000000000000000000000002196 160.0
HKD3_k127_6398155_2 Pyruvate ferredoxin/flavodoxin oxidoreductase K00172 - 1.2.7.1 0.00000000000000000000000000000000002914 143.0
HKD3_k127_6398155_3 4Fe-4S binding domain K00171 - 1.2.7.1 0.0000000000000000000000000000006359 125.0
HKD3_k127_6405872_0 Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ) K00878 - 2.7.1.50 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004814 330.0
HKD3_k127_6405872_1 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000123 250.0
HKD3_k127_6405872_2 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000001004 252.0
HKD3_k127_6405872_3 GTP binding K06944 - - 0.0000000003799 61.0
HKD3_k127_6405872_4 methyl-accepting chemotaxis protein K03406 - - 0.000000001467 65.0
HKD3_k127_6412392_0 urocanate hydratase activity K01712 GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006547,GO:0006548,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009987,GO:0016054,GO:0016153,GO:0016829,GO:0016835,GO:0016836,GO:0019439,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046395,GO:0046483,GO:0046700,GO:0052803,GO:0052805,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 4.2.1.49 8.295e-264 822.0
HKD3_k127_6412392_1 PFAM Extracellular ligand-binding receptor K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008844 372.0
HKD3_k127_6415312_0 TIGRFAM Carbon-monoxide dehydrogenase, catalytic subunit K00198 - 1.2.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007532 607.0
HKD3_k127_6415312_1 PFAM CO dehydrogenase acetyl-CoA synthase delta subunit K00194 - 2.1.1.245 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002048 421.0
HKD3_k127_6415312_2 AAA domain K07321 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006562 282.0
HKD3_k127_6415312_3 - - - - 0.00000000000943 75.0
HKD3_k127_6418707_0 DNA polymerase A domain K02335 - 2.7.7.7 8.658e-306 961.0
HKD3_k127_6418707_1 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004089 264.0
HKD3_k127_6418707_2 Belongs to the ComB family K05979 GO:0003674,GO:0003824,GO:0016829,GO:0016830,GO:0016831,GO:0050545 3.1.3.71 0.000000000000000000000000000000000000000000000000000000004459 208.0
HKD3_k127_6421506_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 413.0
HKD3_k127_6421506_1 reductase K00059 - 1.1.1.100 0.0000000000000000000000000002477 115.0
HKD3_k127_6421506_2 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000000000000000001384 105.0
HKD3_k127_6425511_0 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002289 535.0
HKD3_k127_6425511_1 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003877 482.0
HKD3_k127_6425511_2 Branched-chain amino acid transport system / permease component K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002833 323.0
HKD3_k127_6425511_3 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000001242 126.0
HKD3_k127_644416_0 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 2.804e-195 616.0
HKD3_k127_644416_1 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002523 306.0
HKD3_k127_644416_2 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007685 300.0
HKD3_k127_6467555_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002055 342.0
HKD3_k127_6467555_1 Molybdopterin-binding domain of aldehyde dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000172 237.0
HKD3_k127_6467555_2 CO dehydrogenase flavoprotein domain protein K03519 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000001789 199.0
HKD3_k127_6467555_3 2Fe-2S -binding domain protein K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000004685 185.0
HKD3_k127_6467555_4 PFAM AICARFT IMPCHase bienzyme K00602 - 2.1.2.3,3.5.4.10 0.0000000000000001084 79.0
HKD3_k127_6470361_0 Bacterial regulatory protein, Fis family K02481,K07713,K07714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001725 511.0
HKD3_k127_6470361_1 HELICc2 K03722 GO:0003674,GO:0003824,GO:0004386,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006301,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008026,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0070035,GO:0071704,GO:0071944,GO:0090304,GO:1901360 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006353 502.0
HKD3_k127_6470361_2 DNA photolyase activity K03716 - 4.1.99.14 0.00000000000000000000000000000000000000000000000000000000000002751 223.0
HKD3_k127_6470361_3 His Kinase A (phosphoacceptor) domain - - - 0.000706 49.0
HKD3_k127_6477117_0 PFAM asparagine synthase K06864 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002703 254.0
HKD3_k127_6477117_1 TIGRFAM thiW protein - - - 0.00000000000000000000000000000000000000000000006708 174.0
HKD3_k127_6503288_0 DeoC/LacD family aldolase K08321 - 2.3.1.245 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009204 445.0
HKD3_k127_6503288_1 PFAM class II aldolase adducin family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006753 256.0
HKD3_k127_6503288_2 photosystem I assembly BtpA K06971 - - 0.0000000000000000000000000000000000000000000000000000000000000008089 228.0
HKD3_k127_6503288_3 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000000000000000000000000000001301 222.0
HKD3_k127_6503288_4 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000004284 213.0
HKD3_k127_6503288_5 - - - - 0.000000000000000000000000000000000000000000000000000000005 207.0
HKD3_k127_6503288_6 Protein of unknown function (DUF3106) - - - 0.0000000000000000000000000000000000000003622 155.0
HKD3_k127_6503288_7 response regulator K07814 - - 0.00000000000000000000000000002806 121.0
HKD3_k127_6503288_8 - - - - 0.0000000000000000000000000000611 119.0
HKD3_k127_6503288_9 - - - - 0.000000000000000000003659 101.0
HKD3_k127_6504552_0 PFAM ABC transporter related K01995,K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001731 342.0
HKD3_k127_6504552_1 Branched-chain amino acid transport system / permease component K01998 - - 0.0000000000000000000000000000000000000000000000000000001261 198.0
HKD3_k127_652245_0 Thiamine pyrophosphate enzyme, central domain K06890 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004371 414.0
HKD3_k127_652245_1 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002457 348.0
HKD3_k127_652245_2 PFAM amidohydrolase 2 K07045 - - 0.000000000000000000000000000000000000000000000000000000000672 211.0
HKD3_k127_652245_3 aminopeptidase K18530 - - 0.00000000000000000000000000000001708 134.0
HKD3_k127_652245_4 Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate K06989 - 1.4.1.21 0.0000001711 58.0
HKD3_k127_6525339_0 Aldo/keto reductase family K07079 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001968 333.0
HKD3_k127_6525339_1 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000000001511 163.0
HKD3_k127_6525339_2 heat shock protein binding K03686,K05516 - - 0.00001433 52.0
HKD3_k127_6526954_0 FAD dependent oxidoreductase K00313 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003332 507.0
HKD3_k127_6526954_1 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004553 454.0
HKD3_k127_6526954_2 Diguanylate cyclase with PAS PAC sensor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 463.0
HKD3_k127_6526954_3 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000231 382.0
HKD3_k127_6526954_4 Electron transfer flavoprotein domain K03521 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001444 254.0
HKD3_k127_6526954_5 Electron transfer flavoprotein domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001111 252.0
HKD3_k127_6526954_6 lyase activity - - - 0.00000000000000000000000000000000000000000008943 167.0
HKD3_k127_6526954_7 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S K03855 - - 0.00000000000000000000000000000000000001143 145.0
HKD3_k127_6526954_8 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K12980 - - 0.000000000000000000000000000001559 129.0
HKD3_k127_6583233_0 associated with various cellular activities K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004913 447.0
HKD3_k127_6583233_1 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002688 328.0
HKD3_k127_6583233_2 Putative glutamine amidotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000693 311.0
HKD3_k127_6583233_3 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003247 271.0
HKD3_k127_6583233_4 Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate K06989 - 1.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000108 249.0
HKD3_k127_6583233_5 PFAM Prenyltransferase squalene oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000001 233.0
HKD3_k127_6583233_6 Ribose 5-phosphate isomerase K01808 - 5.3.1.6 0.0000000000000000000000000000000000000000000000000000000000002427 214.0
HKD3_k127_6583233_7 Aerotolerance regulator N-terminal - - - 0.000000000000000000000000000000000000000000001625 186.0
HKD3_k127_6583233_8 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000006901 148.0
HKD3_k127_6583233_9 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K08319 - 1.1.1.411 0.0000000009158 64.0
HKD3_k127_6605554_0 Malate/L-lactate dehydrogenase K00073 - 1.1.1.350 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005064 385.0
HKD3_k127_6605554_1 PFAM Transketolase, thiamine diphosphate binding domain K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003104 306.0
HKD3_k127_6605554_2 PFAM Transketolase, C-terminal domain K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000001497 263.0
HKD3_k127_6605554_3 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005392 250.0
HKD3_k127_6618812_0 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000666 356.0
HKD3_k127_6618812_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 338.0
HKD3_k127_6618812_2 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002407 255.0
HKD3_k127_6618812_3 PFAM short chain dehydrogenase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000002508 238.0
HKD3_k127_6618812_4 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0044424,GO:0044444,GO:0044464,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000006061 142.0
HKD3_k127_6618812_5 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116,K03117 - - 0.000000000000000000071 94.0
HKD3_k127_6619687_0 AcrB/AcrD/AcrF family K03296 - - 0.0 1381.0
HKD3_k127_6619687_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000891 376.0
HKD3_k127_6619687_2 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000001658 192.0
HKD3_k127_6619687_3 PFAM Outer membrane efflux protein - - - 0.0000000000004319 74.0
HKD3_k127_6682078_0 Belongs to the binding-protein-dependent transport system permease family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000753 354.0
HKD3_k127_6682078_1 Bacterial extracellular solute-binding protein, family 7 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001914 312.0
HKD3_k127_6682078_2 ABC-type branched-chain amino acid transport K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003108 276.0
HKD3_k127_6682078_3 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000264 263.0
HKD3_k127_6682078_4 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001616 258.0
HKD3_k127_6682078_5 ABC transporter K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003315 253.0
HKD3_k127_6682078_6 PFAM Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.000000000000000000000000000001002 124.0
HKD3_k127_6689706_0 FtsX-like permease family K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001555 543.0
HKD3_k127_6689706_1 RND efflux system, outer membrane lipoprotein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001913 361.0
HKD3_k127_6689706_2 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004168 310.0
HKD3_k127_6689706_3 Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids K19221 - 2.5.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007945 301.0
HKD3_k127_6689706_4 Protein of unknown function (DUF3795) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004043 297.0
HKD3_k127_6689706_5 Barrel-sandwich domain of CusB or HlyD membrane-fusion K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003024 302.0
HKD3_k127_6689706_6 ferredoxin iron-sulfur binding - - - 0.00000000000000000000000000001212 124.0
HKD3_k127_6694072_0 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 335.0
HKD3_k127_6694072_1 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002543 316.0
HKD3_k127_6694072_2 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000463 302.0
HKD3_k127_6694072_3 PFAM ABC transporter related K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007525 273.0
HKD3_k127_6694072_4 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000005342 235.0
HKD3_k127_6694072_5 PFAM ABC transporter K01996 - - 0.00000000000000000000000000000000000000000000002617 172.0
HKD3_k127_6740814_0 Type II secretion system (T2SS), protein E, N-terminal domain K02454,K02652 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004401 612.0
HKD3_k127_6740814_1 PFAM Major Facilitator Superfamily K02575 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002247 404.0
HKD3_k127_6740814_2 PFAM histone deacetylase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 370.0
HKD3_k127_6751043_0 FAD linked oxidase domain protein K00803,K11472 - 2.5.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008754 594.0
HKD3_k127_6751043_1 Uncharacterised protein family (UPF0261) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 377.0
HKD3_k127_6751043_2 Creatinine amidohydrolase K01470 - 3.5.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007121 359.0
HKD3_k127_6751043_3 DnaK suppressor protein - - - 0.000000000000000000000000000000000000003306 147.0
HKD3_k127_6751043_4 Domain of unknown function (DUF3483) K21834 - - 0.0000000000000000000000000003411 127.0
HKD3_k127_6751043_5 Putative redox-active protein (C_GCAxxG_C_C) - - - 0.000000001289 66.0
HKD3_k127_6777143_0 Belongs to the thiolase family K00626,K00632 - 2.3.1.16,2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 478.0
HKD3_k127_6777143_1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002356 442.0
HKD3_k127_6777143_2 PFAM L-carnitine dehydratase bile acid-inducible protein F - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003569 391.0
HKD3_k127_6777143_3 PFAM ABC transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001043 261.0
HKD3_k127_6777143_4 PFAM ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001792 253.0
HKD3_k127_6777143_5 Branched-chain amino acid transport system, permease component K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000001157 250.0
HKD3_k127_6777143_6 COG0559 Branched-chain amino acid ABC-type transport system, permease components K01997,K11956 - - 0.0000000000000000000000000000000000000000001026 170.0
HKD3_k127_6777143_7 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.00000000000006131 79.0
HKD3_k127_6777143_8 Receptor family ligand binding region K01999 - - 0.00000000002473 72.0
HKD3_k127_6782428_0 Glycosyl transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006362 376.0
HKD3_k127_6782428_1 PFAM peptidase S8 and S53, subtilisin, kexin, sedolisin K01342,K14645 - 3.4.21.62 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002446 321.0
HKD3_k127_6827831_0 PFAM Methylenetetrahydrofolate reductase K00297,K00547 - 1.5.1.20,2.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003604 430.0
HKD3_k127_6827831_1 PFAM 2Fe-2S iron-sulfur cluster binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003512 396.0
HKD3_k127_6827831_2 Methylene-tetrahydrofolate reductase C terminal - - - 0.000000000000000000000000000000000000000002275 156.0
HKD3_k127_6827999_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703,K16792 - 4.2.1.114,4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005446 453.0
HKD3_k127_6827999_1 PFAM isocitrate isopropylmalate dehydrogenase K05824 - 1.1.1.87 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002699 352.0
HKD3_k127_6827999_2 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K05555 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006197 278.0
HKD3_k127_6827999_3 COG0559 Branched-chain amino acid ABC-type transport system, permease components K01997,K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001261 249.0
HKD3_k127_6827999_4 ABC transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000001568 223.0
HKD3_k127_6827999_5 PFAM ABC transporter K01996 - - 0.00000000000000000000000000000000000000000000000000000000000001987 226.0
HKD3_k127_6827999_6 COG0559 Branched-chain amino acid ABC-type transport system, permease components K01997,K01998 - - 0.0000000000000000000000000000000000000000000000000000000000002332 223.0
HKD3_k127_6827999_7 extracellular ligand-binding receptor K01999 - - 0.0000000000000000000000000000000000000000000007992 182.0
HKD3_k127_6827999_8 ATPases associated with a variety of cellular activities - - - 0.000000000000000000000000000000000000000000005407 166.0
HKD3_k127_6827999_9 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 GO:0003674,GO:0003824,GO:0003861,GO:0016829,GO:0016835,GO:0016836 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000001335 164.0
HKD3_k127_6842654_0 acyl-coa dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000354 582.0
HKD3_k127_6842654_1 sequence-specific DNA binding - - - 0.00000000000000000000000000000000000000000000000000000007188 203.0
HKD3_k127_6847770_0 PFAM Acetyl-CoA hydrolase transferase K01067 - 3.1.2.1 1.338e-229 720.0
HKD3_k127_6847770_1 Memo-like protein K06990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000459 487.0
HKD3_k127_6847770_2 Protein of unknown function (DUF1722) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002026 440.0
HKD3_k127_6847770_3 Protein of unknown function (DUF502) - - - 0.00000000000000000000000000000000000000000000001358 178.0
HKD3_k127_6847770_4 - - - - 0.0000000000000000000000000009478 117.0
HKD3_k127_6847770_5 Putative regulatory protein - - - 0.0000000000000007201 79.0
HKD3_k127_6847770_6 Cyclophilin-like K09143 - - 0.0000000000008448 68.0
HKD3_k127_6847770_7 regulatory protein, FmdB family - - - 0.00000000001584 69.0
HKD3_k127_6853138_0 DNA replication proofreading K02336,K06877 - 2.7.7.7 7.233e-208 668.0
HKD3_k127_6853138_1 nuclease K00590,K01174,K02027 - 2.1.1.113,3.1.31.1 0.0000000000000000000000000000000000000000000000000000000000000001292 222.0
HKD3_k127_6853138_2 HicB_like antitoxin of bacterial toxin-antitoxin system - - - 0.00000000000000000000000000002381 117.0
HKD3_k127_6853138_3 Bacterial antitoxin of type II TA system, VapB - - - 0.00000000000000000000000005963 108.0
HKD3_k127_6853138_4 nucleic acid-binding protein contains PIN domain - - - 0.000000000000000000000001903 107.0
HKD3_k127_6853138_5 periplasmic or secreted lipoprotein - - - 0.0000000000000000000002388 97.0
HKD3_k127_6853138_6 - - - - 0.000000000000000000008899 95.0
HKD3_k127_6870565_0 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000028 503.0
HKD3_k127_6870565_1 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002804 377.0
HKD3_k127_6870565_2 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001989 332.0
HKD3_k127_6880165_0 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 4.432e-216 685.0
HKD3_k127_6880165_1 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 591.0
HKD3_k127_6880165_2 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649,K02594 - 2.3.3.13,2.3.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002859 372.0
HKD3_k127_6880165_3 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005071 344.0
HKD3_k127_6880165_4 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004421 321.0
HKD3_k127_6880165_5 Lysine transporter LysE - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002077 302.0
HKD3_k127_6880165_6 Pkd domain containing protein - - - 0.0000000000000000000000000000006731 141.0
HKD3_k127_6880165_7 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 0.00000000000000000000001716 117.0
HKD3_k127_6988105_0 MiaB-like tRNA modifying enzyme K18707 - 2.8.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008724 414.0
HKD3_k127_6988105_1 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 GO:0002097,GO:0002098,GO:0002143,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002525 370.0
HKD3_k127_6988105_2 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.00000000000000000000000000000000000000000000000000001556 195.0
HKD3_k127_6988105_3 NIL - - - 0.00000000000000000000000000000000000000002074 156.0
HKD3_k127_6988105_4 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000422 127.0
HKD3_k127_7007385_0 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006039 439.0
HKD3_k127_7007385_1 PFAM Major Facilitator Superfamily K08218 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002017 367.0
HKD3_k127_7007385_2 CoA-transferase family III K18702 - 2.8.3.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004189 336.0
HKD3_k127_7007385_3 Bacterial transferase hexapeptide K02617 - - 0.0000000000000000000000000000000000000000000000000000001667 199.0
HKD3_k127_7007385_4 - - - - 0.0000000000001514 75.0
HKD3_k127_7018485_0 PFAM FAD linked oxidase domain protein K00102,K00104 - 1.1.2.4,1.1.3.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007056 506.0
HKD3_k127_7018485_1 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005834 269.0
HKD3_k127_7018485_2 PFAM FAD linked oxidase domain protein K11472 - - 0.00000000000000000000000000000000000000000000004255 187.0
HKD3_k127_7018485_3 Thioesterase superfamily K02614 - - 0.00000000000000000000000000000000000000000006402 164.0
HKD3_k127_7018485_4 4Fe-4S dicluster domain K11473 - - 0.0000000000000000000000000000000000000000007177 167.0
HKD3_k127_7018485_5 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.00000000000000000001406 93.0
HKD3_k127_7031001_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002531 520.0
HKD3_k127_7031001_1 Creatinase/Prolidase N-terminal domain K01262,K01271 - 3.4.11.9,3.4.13.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004363 338.0
HKD3_k127_7031001_2 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.00000000000000000000000000000000000000000000000000000000000000000000000002881 259.0
HKD3_k127_7031001_3 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000002454 119.0
HKD3_k127_7031001_4 Tetratricopeptide repeat - - - 0.00000005442 63.0
HKD3_k127_7031001_5 Peptidase dimerisation domain K01438 - 3.5.1.16 0.000009598 49.0
HKD3_k127_7234102_0 Lytic transglycosylase, SLT, LysM and LysM domain-containing K08307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004013 287.0
HKD3_k127_7234102_1 Ornithine cyclodeaminase/mu-crystallin family K01750 - 4.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000008738 268.0
HKD3_k127_7234102_2 Enoyl-CoA hydratase K15866 - 5.3.3.18 0.0000000000000000000000000000000000000000000000000000000000001811 221.0
HKD3_k127_7234102_3 Probable molybdopterin binding domain K03750 - 2.10.1.1 0.0000000000000000000000000000003547 125.0
HKD3_k127_7234102_4 decarboxylase beta subunit K01572 - 4.1.1.3 0.000000308 53.0
HKD3_k127_7247326_0 PFAM Pyruvate carboxyltransferase - - - 2.731e-275 859.0
HKD3_k127_7247326_1 Domain of unknown function (DUF1846) - - - 7.407e-269 835.0
HKD3_k127_7247326_2 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 3.173e-240 756.0
HKD3_k127_7247326_3 Methylmalonyl-CoA mutase K01847,K01848 - 5.4.99.2 6.717e-206 647.0
HKD3_k127_7247326_4 Histidyl-tRNA synthetase K01892 - 6.1.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003802 484.0
HKD3_k127_7247326_5 Zn-dependent dipeptidase, microsomal dipeptidase - - - 0.00004319 48.0
HKD3_k127_7262968_0 Domain of unknown function (DUF3390) K18929 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 540.0
HKD3_k127_7262968_1 Domain of unknown function (DUF2088) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000332 334.0
HKD3_k127_7262968_2 Cysteine-rich domain K18928 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003613 313.0
HKD3_k127_7262968_3 Pfam:DUF162 K00782 - - 0.0000000000000000000000000000000000000000000000004645 184.0
HKD3_k127_7262968_4 Psort location Cytoplasmic, score K09707 - - 0.0000000000000000000000000000000000000001008 154.0
HKD3_k127_7264901_0 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001934 460.0
HKD3_k127_7264901_1 Branched-chain amino acid transport system / permease component K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002581 304.0
HKD3_k127_7264901_2 Alcohol dehydrogenase GroES-like domain K00004,K00060 - 1.1.1.103,1.1.1.303,1.1.1.4 0.000000000000003805 79.0
HKD3_k127_7265530_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 1.819e-201 634.0
HKD3_k127_7265530_1 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002538 434.0
HKD3_k127_7265530_2 carbon starvation protein CstA K06200 - - 0.000000000000004415 75.0
HKD3_k127_7307070_0 Phosphohydrolase-associated domain K01129 - 3.1.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001778 574.0
HKD3_k127_7307070_1 SelR domain K07305,K12267 - 1.8.4.11,1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004838 518.0
HKD3_k127_7307070_2 PFAM ABC transporter K02056 - 3.6.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 404.0
HKD3_k127_7307070_3 membrane K07335 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002357 305.0
HKD3_k127_7307070_4 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002114 282.0
HKD3_k127_7307070_5 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006778 274.0
HKD3_k127_7307070_6 PFAM Pyridoxal-dependent decarboxylase K01580 - 4.1.1.15 0.0000000009142 63.0
HKD3_k127_7348543_0 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 2.455e-195 616.0
HKD3_k127_7348543_1 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 GO:0000166,GO:0000287,GO:0000502,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009266,GO:0009376,GO:0009408,GO:0009628,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0019904,GO:0022607,GO:0030554,GO:0031597,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034214,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043335,GO:0043933,GO:0044085,GO:0044238,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051259,GO:0065003,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1902494,GO:1904949,GO:1905368,GO:1905369 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009399 473.0
HKD3_k127_7348543_2 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 390.0
HKD3_k127_7348543_3 Fibronectin type 3 domain - - - 0.0000000000000000000000006014 113.0
HKD3_k127_7351002_0 Belongs to the binding-protein-dependent transport system permease family K01995,K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 460.0
HKD3_k127_7351002_1 alcohol dehydrogenase K00001,K00008 - 1.1.1.1,1.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001615 314.0
HKD3_k127_7351002_2 Pfam:Kce K18013 - 2.3.1.247 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000476 295.0
HKD3_k127_7351002_3 ATPases associated with a variety of cellular activities - - - 0.00000000000000000000000000000000000000000000000000000002384 211.0
HKD3_k127_7351002_4 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000001187 182.0
HKD3_k127_7351002_5 Belongs to the binding-protein-dependent transport system permease family - - - 0.000000000000000000000000000000000000000009504 165.0
HKD3_k127_7351002_6 dehydratase - - - 0.00000001499 61.0
HKD3_k127_7351002_7 PFAM 3-hydroxyacyl-CoA dehydrogenase domain protein K00074 - 1.1.1.157 0.000003068 51.0
HKD3_k127_7353015_0 Branched-chain amino acid transport system / permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000066 287.0
HKD3_k127_7353015_1 Psort location CytoplasmicMembrane, score K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004737 267.0
HKD3_k127_7353015_2 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001097 271.0
HKD3_k127_7353015_3 Branched-chain amino acid ATP-binding cassette transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003969 258.0
HKD3_k127_7353015_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000002609 237.0
HKD3_k127_7353015_5 Amidohydrolase family - - - 0.00000000000000000000000000000000000000169 149.0
HKD3_k127_7353015_6 PFAM Receptor family ligand binding region K01999 - - 0.00000003873 55.0
HKD3_k127_7366680_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007635 575.0
HKD3_k127_7366680_1 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004516 427.0
HKD3_k127_7366680_10 ATPases associated with a variety of cellular activities K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003674 254.0
HKD3_k127_7366680_11 ATP-grasp domain K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000005046 235.0
HKD3_k127_7366680_12 Belongs to the carbamate kinase family K00926 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006525,GO:0006527,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008804,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009987,GO:0016054,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0019546,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 2.7.2.2 0.00000000000000000000000000000000000000000000000853 179.0
HKD3_k127_7366680_13 helix_turn_helix isocitrate lyase regulation - - - 0.0000000000000000000000000000000000000003595 160.0
HKD3_k127_7366680_2 Aspartate carbamoyltransferase K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008391 356.0
HKD3_k127_7366680_3 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 324.0
HKD3_k127_7366680_4 Amidohydrolase family K01464,K01466 - 3.5.2.2,3.5.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002778 301.0
HKD3_k127_7366680_5 leucine import across plasma membrane K01997,K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001115 287.0
HKD3_k127_7366680_6 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) K02626 - 4.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003125 280.0
HKD3_k127_7366680_7 L-phenylalanine transmembrane transporter activity K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004773 275.0
HKD3_k127_7366680_8 branched-chain amino acid transmembrane transporter activity K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001051 270.0
HKD3_k127_7366680_9 Belongs to the arginase family K01476,K01480 - 3.5.3.1,3.5.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000008057 267.0
HKD3_k127_7371637_0 Oxidoreductase FAD-binding domain K05916 - 1.14.12.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007718 392.0
HKD3_k127_7371637_1 Flavin containing amine oxidoreductase K09835 - 5.2.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004063 344.0
HKD3_k127_7371637_2 Protein of unknown function (DUF4197) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001091 258.0
HKD3_k127_7372074_0 PFAM Rubrerythrin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007564 271.0
HKD3_k127_7372074_1 Na -dependent transporter K03453 - - 0.00000000000000000000000000000003667 137.0
HKD3_k127_7372074_2 Protein of unknown function, DUF255 K06888 - - 0.0000000000000000000000003405 108.0
HKD3_k127_7382533_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00260,K00261,K00262 - 1.4.1.2,1.4.1.3,1.4.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 524.0
HKD3_k127_7382533_1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01007 - 2.7.9.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005222 528.0
HKD3_k127_7382533_2 Fibronectin type 3 domain - - - 0.00000000000000000000000000000000000000000000000000000118 205.0
HKD3_k127_7382533_3 nuclear chromosome segregation - - - 0.000000000000000000000000000000000000000000001575 184.0
HKD3_k127_7382533_4 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.0000006352 61.0
HKD3_k127_7384491_0 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008683 589.0
HKD3_k127_7384491_1 Bacterial extracellular solute-binding protein, family 7 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 453.0
HKD3_k127_7384491_2 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002542 323.0
HKD3_k127_7384491_3 Branched-chain amino acid ATP-binding cassette transporter K01995,K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006129 290.0
HKD3_k127_7384491_4 Branched-chain amino acid transport system / permease component K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004939 289.0
HKD3_k127_7384491_5 PFAM ABC transporter related K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005381 274.0
HKD3_k127_7384491_6 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000000001918 85.0
HKD3_k127_7391227_0 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000000000000000002654 160.0
HKD3_k127_7391227_1 Regulatory protein, FmdB family - - - 0.0000000004153 63.0
HKD3_k127_7391227_2 PFAM TrkA-N domain K03499 - - 0.0000000674 61.0
HKD3_k127_7391227_4 translation release factor activity K03265 - - 0.0001681 52.0
HKD3_k127_7406110_0 COG1593 TRAP-type C4-dicarboxylate transport system, large permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001263 289.0
HKD3_k127_7406110_1 Domain of unknown function (DUF3483) K21834 - - 0.000000000000000000000000000002616 130.0
HKD3_k127_7406110_2 COG4665 TRAP-type mannitol chloroaromatic compound transport system, small permease component - - - 0.00000000007836 68.0
HKD3_k127_7434369_0 Pyridoxal-phosphate dependent enzyme - - - 3.556e-214 674.0
HKD3_k127_7434369_1 Bacterial extracellular solute-binding protein, family 7 K11688 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 383.0
HKD3_k127_7434369_2 Tripartite ATP-independent periplasmic transporter, DctM component K11690 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001802 381.0
HKD3_k127_7434369_3 Trap-type c4-dicarboxylate transport system, small permease component K11689 - - 0.00000000000000000000000000000003703 132.0
HKD3_k127_7434369_4 Peptidase dimerisation domain K01438 - 3.5.1.16 0.000000000000172 70.0
HKD3_k127_7436492_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.0 1010.0
HKD3_k127_7436492_1 HxlR-like helix-turn-helix - - - 0.000000000000000000000000000000000000000000000000000000000000001619 225.0
HKD3_k127_7436492_2 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.000000000000000000002768 101.0
HKD3_k127_7436492_3 Domain of unknown function (DUF4174) - - - 0.000000000000000000238 94.0
HKD3_k127_7447224_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 6.474e-312 966.0
HKD3_k127_7447224_1 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003222 424.0
HKD3_k127_7447224_2 PFAM ABC transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004239 391.0
HKD3_k127_7447224_3 Receptor family ligand binding region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005215 355.0
HKD3_k127_7447224_4 Branched-chain amino acid transport system / permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003967 280.0
HKD3_k127_7447224_5 Belongs to the UPF0173 family - - - 0.0000000000000000000000000000000000000000000005369 175.0
HKD3_k127_7447224_6 COG4177 ABC-type branched-chain amino acid transport system, permease component - - - 0.00000000000000000000000000000000007935 138.0
HKD3_k127_7447224_7 Cupin domain - - - 0.000000002589 62.0
HKD3_k127_7455207_0 PFAM AICARFT IMPCHase bienzyme K00602 - 2.1.2.3,3.5.4.10 1.852e-194 614.0
HKD3_k127_7455207_1 PFAM ABC transporter related K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006986 346.0
HKD3_k127_7461928_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.00000000000000000000000000000000000000000000000000000000000005734 221.0
HKD3_k127_7461928_1 RNA-binding - - - 0.0000000000000000000000000000001002 127.0
HKD3_k127_7461928_2 peptidase dimerisation domain protein K01436 - - 0.000008338 49.0
HKD3_k127_7462505_0 DNA Topoisomerase IV K02469 - 5.99.1.3 0.0 1125.0
HKD3_k127_7462505_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 1.581e-294 925.0
HKD3_k127_7462505_10 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000001776 130.0
HKD3_k127_7462505_11 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000004317 111.0
HKD3_k127_7462505_12 Binds together with S18 to 16S ribosomal RNA K02990 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000005375 107.0
HKD3_k127_7462505_13 Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b) K07337,K21008 GO:0000270,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008047,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009279,GO:0009987,GO:0016020,GO:0019867,GO:0019899,GO:0030203,GO:0030234,GO:0030312,GO:0030313,GO:0031241,GO:0031975,GO:0034645,GO:0042546,GO:0043085,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044093,GO:0044237,GO:0044249,GO:0044260,GO:0044425,GO:0044462,GO:0044464,GO:0050790,GO:0065007,GO:0065009,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:0098552,GO:0098772,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 - 0.0009782 49.0
HKD3_k127_7462505_2 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007617 605.0
HKD3_k127_7462505_3 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006385 505.0
HKD3_k127_7462505_4 Probable molybdopterin binding domain K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002948 419.0
HKD3_k127_7462505_5 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 372.0
HKD3_k127_7462505_6 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004467 268.0
HKD3_k127_7462505_7 binds to the 23S rRNA K02939 - - 0.000000000000000000000000000000000000135 149.0
HKD3_k127_7462505_8 Universal stress protein family - - - 0.0000000000000000000000000000008018 129.0
HKD3_k127_7462505_9 Putative regulatory protein - - - 0.00000000000000000000000000000104 124.0
HKD3_k127_7466207_0 CobB/CobQ-like glutamine amidotransferase domain K01952 - 6.3.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005092 399.0
HKD3_k127_7466207_1 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002821 377.0
HKD3_k127_7466207_2 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.0000000000000000000000000000000000000000000000000000000008172 209.0
HKD3_k127_7467847_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0 1062.0
HKD3_k127_7467847_1 May be involved in recombinational repair of damaged DNA K03631 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0033554,GO:0034641,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 436.0
HKD3_k127_7467847_10 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.00000000000000000000000000000000001477 140.0
HKD3_k127_7467847_2 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 GO:0003674,GO:0003824,GO:0004042,GO:0004358,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006592,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1,2.3.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001587 408.0
HKD3_k127_7467847_3 Ribosomal protein S2 K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001737 361.0
HKD3_k127_7467847_4 Catalyzes the reversible phosphorylation of UMP to UDP K09903 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006767 342.0
HKD3_k127_7467847_5 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 GO:0000166,GO:0003674,GO:0003824,GO:0003951,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006741,GO:0006753,GO:0006766,GO:0006767,GO:0006769,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008976,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009820,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016776,GO:0017076,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001316 306.0
HKD3_k127_7467847_6 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005923 282.0
HKD3_k127_7467847_7 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000003474 218.0
HKD3_k127_7467847_8 Acetyltransferase (GNAT) domain K00619 - 2.3.1.1 0.0000000000000000000000000000000000000000000000000000000001825 206.0
HKD3_k127_7467847_9 PFAM peptidase - - - 0.0000000000000000000000000000000000004913 152.0
HKD3_k127_7521016_0 D-galactarate dehydratase / Altronate hydrolase, C terminus K16846,K16850 - 4.2.1.7,4.4.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000418 395.0
HKD3_k127_7521016_1 pyruvate flavodoxin ferredoxin oxidoreductase K00174 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006208 331.0
HKD3_k127_7521016_2 PFAM thiamine pyrophosphate protein domain protein TPP-binding K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002405 293.0
HKD3_k127_7521016_3 PFAM Pyruvate K00177 - 1.2.7.3 0.000000000000000000000000000000000000000000462 173.0
HKD3_k127_7521016_4 GntR family - - - 0.0000000000000000000000000000000000001743 152.0
HKD3_k127_7521016_5 2-oxoglutarate ferredoxin oxidoreductase, delta subunit K00176 - 1.2.7.3 0.00000000000000006062 83.0
HKD3_k127_7533942_0 Transport of potassium into the cell K03549 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015672,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0098655,GO:0098660,GO:0098662 - 2.666e-243 767.0
HKD3_k127_7533942_1 Belongs to the universal stress protein A family - - - 0.000000000000003439 80.0
HKD3_k127_7571208_0 Beta-lactamase superfamily domain K03476 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 385.0
HKD3_k127_7571208_1 ABC transporter, ATP-binding protein K01996,K11963 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001477 249.0
HKD3_k127_7571208_2 Uroporphyrinogen decarboxylase (URO-D) - - - 0.000000000000000000006748 101.0
HKD3_k127_7571208_3 PFAM ABC transporter related K01995 - - 0.00005724 46.0
HKD3_k127_7578515_0 Uncharacterised protein family (UPF0182) K09118 GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 1.214e-316 995.0
HKD3_k127_7578515_1 elongation factor SelB, winged helix K03833 - - 9.117e-200 640.0
HKD3_k127_7578515_2 YacP-like NYN domain K06962 - - 0.000000000000000000000000000002733 126.0
HKD3_k127_7593057_0 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007707 410.0
HKD3_k127_7593057_1 COG COG1593 TRAP-type C4-dicarboxylate transport system, large permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 327.0
HKD3_k127_7593057_2 Creatinine amidohydrolase K01470 - 3.5.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004403 310.0
HKD3_k127_7593057_3 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000001144 202.0
HKD3_k127_7593057_4 Bacterial extracellular solute-binding protein, family 7 K21395 - - 0.00000000000000000000000000000000000000000003873 173.0
HKD3_k127_7593057_5 response regulator K07814 - - 0.0000000000000000000000000000000002467 136.0
HKD3_k127_7593057_6 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.00000000000000000000000000000000196 142.0
HKD3_k127_7593057_7 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000008165 128.0
HKD3_k127_7593057_8 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000003289 79.0
HKD3_k127_7593057_9 TIGRFAM oligopeptide dipeptide ABC transporter, ATPase subunit K02031 - - 0.000000291 52.0
HKD3_k127_7603410_0 Zinc-binding dehydrogenase K00008 - 1.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005447 379.0
HKD3_k127_7603410_1 xylulokinase activity K00854 - 2.7.1.17 0.000000000000000000000000000000000003878 140.0
HKD3_k127_7603410_2 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 0.000000000000000000000000007682 112.0
HKD3_k127_7603410_3 Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source K01483 - 4.3.2.3 0.0000000000000000000000008071 110.0
HKD3_k127_7619219_0 Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O K05601 - 1.7.99.1 5e-270 839.0
HKD3_k127_7619219_1 Proto-chlorophyllide reductase 57 kD subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002718 256.0
HKD3_k127_7630507_0 Penicillin-binding protein, dimerisation domain K03587 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008586 609.0
HKD3_k127_7630507_1 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008765,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008367 466.0
HKD3_k127_7630507_2 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003122 363.0
HKD3_k127_7630507_3 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002445 295.0
HKD3_k127_7630507_4 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009069 280.0
HKD3_k127_7630507_5 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000000000004847 227.0
HKD3_k127_7630507_6 transcription regulator activity K03925 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.00000000000000000000000000000000000000000000001227 174.0
HKD3_k127_7630507_7 Cell division protein FtsL - - - 0.0000000002624 66.0
HKD3_k127_7630607_0 BadF BadG BcrA BcrD - - - 0.0 1351.0
HKD3_k127_7630607_1 PFAM peptidase S45 penicillin amidase K01434,K07116 - 3.5.1.11,3.5.1.97 3.772e-266 839.0
HKD3_k127_7630607_2 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 3.562e-203 641.0
HKD3_k127_7630607_3 Cysteine-rich domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009635 508.0
HKD3_k127_7630607_4 Cysteine-rich domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001583 461.0
HKD3_k127_7630607_5 - - - - 0.000000000000000000000000000000000000000000000001009 180.0
HKD3_k127_7641387_0 Dehydratase family K01687 - 4.2.1.9 9.198e-234 735.0
HKD3_k127_7641387_1 PFAM Alcohol dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009517 411.0
HKD3_k127_7663216_0 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000166 304.0
HKD3_k127_7663216_1 dehydratase - - - 0.00000002245 57.0
HKD3_k127_7671925_0 PFAM D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K04496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008594 321.0
HKD3_k127_7671925_1 COG0179 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) K16164 - 3.7.1.5 0.0000000000000000000000000000000000000000000000000000004739 198.0
HKD3_k127_7671925_2 C4-dicarboxylate - - - 0.00000000000000002294 89.0
HKD3_k127_7671925_3 - - - - 0.0000000001278 65.0
HKD3_k127_7671925_4 transglycosylase K08307 - - 0.00003679 52.0
HKD3_k127_7719090_0 ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates K16787 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004922 261.0
HKD3_k127_7719090_1 ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates K16786,K16787 - - 0.00000000000000000000000000000000000000000002443 167.0
HKD3_k127_7719090_2 peptidase U32 K08303 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000002793 90.0
HKD3_k127_7719842_0 PFAM CoA-binding domain protein K09181 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004225 485.0
HKD3_k127_7719842_1 COG1593 TRAP-type C4-dicarboxylate transport system large permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003471 384.0
HKD3_k127_7719842_2 PHP domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001893 320.0
HKD3_k127_7719842_3 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000000000009854 94.0
HKD3_k127_7726204_0 beta-keto acid cleavage enzyme K18013 - 2.3.1.247 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001592 356.0
HKD3_k127_7726204_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006003 297.0
HKD3_k127_7726204_2 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.000000000000000000000000000000000000000000000000000003089 196.0
HKD3_k127_7726204_3 PHP family - - - 0.00000000007203 70.0
HKD3_k127_7761762_0 TatD related DNase K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004229 511.0
HKD3_k127_7769496_0 Conserved carboxylase domain K01571 - 4.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002526 423.0
HKD3_k127_7769496_1 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds K01501 - 3.5.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007349 370.0
HKD3_k127_7769496_2 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.0000000000000000000000000000000000000000000000000000000000008098 223.0
HKD3_k127_7769496_3 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.0000000000000000000005592 101.0
HKD3_k127_7769496_4 CobW/HypB/UreG, nucleotide-binding domain K04652 - - 0.000000000000000000002673 94.0
HKD3_k127_7769496_5 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.0000000000000006654 79.0
HKD3_k127_7769496_6 - - - - 0.000000002038 59.0
HKD3_k127_7771534_0 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002451 464.0
HKD3_k127_7771534_1 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 GO:0003674,GO:0003824,GO:0004857,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006950,GO:0006979,GO:0008150,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030234,GO:0043021,GO:0043022,GO:0043023,GO:0043086,GO:0044092,GO:0044424,GO:0044464,GO:0044877,GO:0050790,GO:0050896,GO:0065007,GO:0065009,GO:0098772 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 400.0
HKD3_k127_7771534_2 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000001614 244.0
HKD3_k127_7797020_0 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000406 408.0
HKD3_k127_7797020_1 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000002027 264.0
HKD3_k127_7797020_2 Molybdopterin guanine dinucleotide synthesis protein B K03753,K13818 - 2.7.7.77 0.0000000000000000000000000000000000000000000000000000000000000001681 227.0
HKD3_k127_7797020_3 May be involved in the formation or repair of Fe-S clusters present in iron-sulfur proteins K04488,K13819 - - 0.000000000000000000000000000000000000000000000000000000000000006604 220.0
HKD3_k127_7797020_4 component of anaerobic - - - 0.00000000000000000000000000001109 131.0
HKD3_k127_7803178_0 Abc transporter K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000278 360.0
HKD3_k127_7803178_1 PFAM binding-protein-dependent transport systems inner membrane component K02033,K12369,K13890 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002794 316.0
HKD3_k127_7803178_2 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001469 264.0
HKD3_k127_7803178_3 succinate dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001999 261.0
HKD3_k127_7803178_4 COG0477 Permeases of the major facilitator superfamily - - - 0.00000000000000000000000000000000000000004252 167.0
HKD3_k127_7803178_5 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000918 85.0
HKD3_k127_7803178_6 2Fe-2S iron-sulfur cluster binding domain - - - 0.00000003508 60.0
HKD3_k127_7838859_0 Converts the aldose L-fucose into the corresponding ketose L-fuculose - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005221 367.0
HKD3_k127_7838859_1 Belongs to the glycosyl hydrolase 32 family K01193,K01212 - 3.2.1.26,3.2.1.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009596 346.0
HKD3_k127_7838859_2 Xylulose 5-phosphate 3-epimerase K03079 - 5.1.3.22 0.0000000000000000000000000000005663 133.0
HKD3_k127_7847215_0 PFAM fumarate reductase succinate dehydrogenase flavoprotein K00239,K00244 - 1.3.5.1,1.3.5.4 2.355e-197 631.0
HKD3_k127_7847215_1 TIGRFAM hydro-lyase, Fe-S type, tartrate fumarate subfamily, alpha subunit K01677 - 4.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002957 374.0
HKD3_k127_7847215_2 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002022 347.0
HKD3_k127_7847215_3 TIGRFAM hydro-lyase, Fe-S type, tartrate fumarate subfamily, beta subunit K01676,K01678 - 4.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007632 296.0
HKD3_k127_7847215_4 Nitrate reductase gamma subunit - - - 0.00000000000000000000000000000000000000000000000000000285 201.0
HKD3_k127_7847215_5 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000002995 180.0
HKD3_k127_7847215_6 Cytochrome b/b6/petB K00412 - - 0.0000000000000000000000000000000000000000000000003502 192.0
HKD3_k127_7847215_7 PFAM Rieske 2Fe-2S K02636 - 1.10.9.1 0.000000000000000000000000004955 115.0
HKD3_k127_7847215_9 2Fe-2S iron-sulfur cluster binding domain K00240 - 1.3.5.1,1.3.5.4 0.000000008057 58.0
HKD3_k127_7851578_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 8.138e-266 827.0
HKD3_k127_7851578_1 Pyruvate:ferredoxin oxidoreductase core domain II K00169 - 1.2.7.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004662 508.0
HKD3_k127_7851578_2 PFAM Acyl-CoA dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005962 429.0
HKD3_k127_7851578_3 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00170 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005558 386.0
HKD3_k127_7851578_4 PFAM BadF BadG BcrA BcrD ATPase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009005 290.0
HKD3_k127_7851578_5 Helix-turn-helix domain - - - 0.0000000000000000000000000000000000001417 149.0
HKD3_k127_7851578_6 TIGRFAM pyruvate ferredoxin flavodoxin oxidoreductase, delta subunit K00171 - 1.2.7.1 0.00000000000000000002179 91.0
HKD3_k127_7855117_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335,K15022,K18331 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0044237,GO:0044424,GO:0044464,GO:0045333,GO:0055114,GO:0071944 1.12.1.3,1.17.1.10,1.6.5.3 0.0 1150.0
HKD3_k127_7855117_1 PFAM CobQ CobB MinD ParA nucleotide binding domain K07321 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 301.0
HKD3_k127_7855117_2 PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334,K18330 - 1.12.1.3,1.6.5.3 0.00000000000000000000000000000000000000000000000000002787 192.0
HKD3_k127_7858972_0 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain K01596,K01610 - 4.1.1.32,4.1.1.49 1.177e-229 724.0
HKD3_k127_7858972_1 PFAM Tetratricopeptide repeat - - - 1.646e-221 709.0
HKD3_k127_7858972_2 peptidase dimerisation domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002212 593.0
HKD3_k127_7858972_3 lactate racemase activity K22373 - 5.1.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000532 354.0
HKD3_k127_7858972_4 Protein of unknown function (DUF3187) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 327.0
HKD3_k127_7858972_5 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000001293 226.0
HKD3_k127_7858972_6 PFAM Silent information regulator protein Sir2 K12410 - - 0.000000000000000000000000000000000000000000000000000003643 200.0
HKD3_k127_7859697_0 Enoyl-(Acyl carrier protein) reductase K00046 - 1.1.1.69 0.00000000000000000000000000000000000000000000000000000001387 208.0
HKD3_k127_7859697_1 Flavodoxin domain - - - 0.000000000000000000000000000000000000000000000001732 180.0
HKD3_k127_7859697_2 - - - - 0.0000000000000002158 79.0
HKD3_k127_7859697_3 - - - - 0.0000000000001879 75.0
HKD3_k127_7867412_0 SMART Chromosomal replication initiator DnaA domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 361.0
HKD3_k127_7867412_1 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008546 361.0
HKD3_k127_7867412_2 PFAM peptidase M48 Ste24p - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001693 315.0
HKD3_k127_7867412_3 Aldo/keto reductase family K07079 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005033 298.0
HKD3_k127_7867412_4 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000001679 249.0
HKD3_k127_7867412_5 PFAM FGGY family of carbohydrate kinases, N-terminal domain K00848,K00851,K00854,K00880,K11216 - 2.7.1.12,2.7.1.17,2.7.1.189,2.7.1.5,2.7.1.53 0.00000000000000000000000000000000000000000000000000000000000003244 227.0
HKD3_k127_7867412_6 Bacterial extracellular solute-binding protein, family 7 - - - 0.000000000000000000000000000000000000000003556 169.0
HKD3_k127_7867412_7 Acyl-ACP thioesterase K01071 - 3.1.2.21 0.0000000000000000000000000000000000002222 150.0
HKD3_k127_7890256_0 NADH dehydrogenase K00335,K18331 - 1.12.1.3,1.6.5.3 4.84e-254 800.0
HKD3_k127_7890256_1 Thioredoxin-like [2Fe-2S] ferredoxin K00334,K18330,K22340 - 1.12.1.3,1.17.1.11,1.6.5.3 0.000000000000000000000000000000000000000000000009436 178.0
HKD3_k127_7890256_2 Ferredoxin K00335,K17992 - 1.12.1.3,1.6.5.3 0.000000000000000000000000000000000005158 141.0
HKD3_k127_7890256_3 PHP-associated K07053 - 3.1.3.97 0.00073 44.0
HKD3_k127_7900930_0 TIGRFAM TRAP transporter, 4TM 12TM fusion protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002396 473.0
HKD3_k127_7900930_1 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004904 381.0
HKD3_k127_7900930_2 FAD dependent oxidoreductase K00303 - 1.5.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 349.0
HKD3_k127_7900930_3 NMT1-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000211 256.0
HKD3_k127_7900930_4 phosphatase activity K05967 - - 0.0000000000000000000000000000000000000000000000000000000000000185 219.0
HKD3_k127_7900930_5 Bifunctional nuclease K08999 - - 0.0000000000000000000000005809 115.0
HKD3_k127_7900930_6 sequence-specific DNA binding - - - 0.00003019 51.0
HKD3_k127_7903970_0 PFAM TRAP C4-dicarboxylate transport system permease DctM subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000158 476.0
HKD3_k127_7903970_1 Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000241 442.0
HKD3_k127_7903970_2 Bacterial extracellular solute-binding protein, family 7 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002487 404.0
HKD3_k127_7903970_3 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000007387 267.0
HKD3_k127_7903970_4 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000000000000000000004846 128.0
HKD3_k127_7904246_0 Phospholipase A1 K01058 - 3.1.1.32,3.1.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 390.0
HKD3_k127_7904246_1 COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006 287.0
HKD3_k127_7904246_2 COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003213 283.0
HKD3_k127_7904246_3 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000003085 178.0
HKD3_k127_7904246_4 ACT domain - - - 0.00000000000000000000000000000000000002642 148.0
HKD3_k127_7904246_5 Glutaredoxin - - - 0.000000000000000000302 94.0
HKD3_k127_7908843_0 Polysulphide reductase, NrfD K00185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005493 573.0
HKD3_k127_7908843_1 cytochrome c oxidase K00404 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005021 565.0
HKD3_k127_7908843_10 Polysulphide reductase, NrfD K00185 - - 0.00000000000000000000002791 107.0
HKD3_k127_7908843_11 - - - - 0.0000001777 56.0
HKD3_k127_7908843_2 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00184 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008745 524.0
HKD3_k127_7908843_3 cytochrome C oxidase mono-heme subunit FixO K00405 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005644 479.0
HKD3_k127_7908843_4 Copper-translocating P-type atpase K17686 - 3.6.3.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005071 411.0
HKD3_k127_7908843_5 Pfam Polysulphide reductase, NrfD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004607 261.0
HKD3_k127_7908843_6 Cytochrome c7 and related cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000249 213.0
HKD3_k127_7908843_7 4Fe-4S dicluster domain K00184 - - 0.000000000000000000000000000000000000000000000000000000002345 214.0
HKD3_k127_7908843_8 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000001912 126.0
HKD3_k127_7908843_9 Biogenesis protein K09792 - - 0.000000000000000000000001118 112.0
HKD3_k127_7911303_0 E1-E2 ATPase K01533,K17686 - 3.6.3.4,3.6.3.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 422.0
HKD3_k127_7911303_1 Ribosomal protein L13 K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000003903 199.0
HKD3_k127_7911303_2 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.0000000000000000000000000000000000000000000054 166.0
HKD3_k127_7911303_3 - - - - 0.00000000000000000000000604 105.0
HKD3_k127_7911303_4 CoA-transferase family III K18702 - 2.8.3.19 0.00000005923 55.0
HKD3_k127_7931383_0 Penicillin-binding protein, dimerisation domain K05515 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004164 583.0
HKD3_k127_7931383_1 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 515.0
HKD3_k127_7931383_11 TIGRFAM monovalent cation proton antiporter, MnhG PhaG subunit K05571 - - 0.0000000004903 67.0
HKD3_k127_7931383_12 Winged helix-turn-helix domain (DUF2582) - - - 0.000000001946 61.0
HKD3_k127_7931383_13 ROK family K00847 - 2.7.1.4 0.00085 45.0
HKD3_k127_7931383_2 PFAM TrkA-N domain K03499 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002159 421.0
HKD3_k127_7931383_3 Cell cycle protein K05837 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003964 399.0
HKD3_k127_7931383_4 beta-keto acid cleavage enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002714 288.0
HKD3_k127_7931383_5 - - - - 0.0000000000000000000000000000000000000000000000000000001677 207.0
HKD3_k127_7931383_6 Protein of unknown function, DUF488 - - - 0.000000000000000000000000000000000000000005834 158.0
HKD3_k127_7931383_7 Na+/H+ ion antiporter subunit K05569 - - 0.0000000000000000000000000000000000000008935 154.0
HKD3_k127_7931383_8 Thioesterase superfamily protein - - - 0.000000000000000000000000002688 115.0
HKD3_k127_7931383_9 Multiple resistance and pH regulation protein F (MrpF / PhaF) K05570 - - 0.000000000000000000000468 97.0
HKD3_k127_7958180_0 GXGXG motif - - - 0.0 1046.0
HKD3_k127_7958180_1 Conserved region in glutamate synthase - - - 8.568e-194 619.0
HKD3_k127_7958180_2 Major Facilitator Superfamily K08177 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007513 499.0
HKD3_k127_7958180_3 peptidase dimerisation domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003835 501.0
HKD3_k127_7958180_4 glutamate synthase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003154 477.0
HKD3_k127_7958180_5 PFAM Methylenetetrahydrofolate reductase K00297,K00547 - 1.5.1.20,2.1.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 407.0
HKD3_k127_7958180_6 PFAM Methylene-tetrahydrofolate reductase C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001187 251.0
HKD3_k127_7958180_7 HD domain - - - 0.00000000000000000000000354 109.0
HKD3_k127_7958180_8 PFAM methyl-viologen-reducing hydrogenase delta subunit - - - 0.00000000000000003796 89.0
HKD3_k127_7978675_0 Domain of unknown function (DUF2088) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003722 599.0
HKD3_k127_7978675_1 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004312 371.0
HKD3_k127_7978675_2 transporter solute receptor, DctP family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001804 288.0
HKD3_k127_7978675_3 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000002572 255.0
HKD3_k127_7978675_4 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000001468 60.0
HKD3_k127_7984363_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005627 524.0
HKD3_k127_7984363_1 two component, sigma54 specific, transcriptional regulator, Fis family K07712 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005574 498.0
HKD3_k127_7984363_2 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000419 318.0
HKD3_k127_7984363_3 Cache sensor signal transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000703 286.0
HKD3_k127_7984363_4 Histidine kinase K03407 - 2.7.13.3 0.00000005426 58.0
HKD3_k127_8001775_0 PFAM Radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006723 392.0
HKD3_k127_8001775_1 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003365 352.0
HKD3_k127_8001775_2 KR domain K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008509 270.0
HKD3_k127_8018223_0 ABC transporter K10441 - 3.6.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002248 280.0
HKD3_k127_8018223_1 Belongs to the binding-protein-dependent transport system permease family K10440 - - 0.000000000000000000000000000000000000000000000000000000000000000008825 236.0
HKD3_k127_8018223_2 Belongs to the binding-protein-dependent transport system permease family K10440 - - 0.00000000000000000000000000000000000000000000000000000000000001582 229.0
HKD3_k127_8018223_3 Periplasmic binding proteins and sugar binding domain of LacI family K10439,K17202,K17205,K17213 - - 0.0000000000000000000000000000000000000000000000000000006997 206.0
HKD3_k127_8032172_0 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 4.464e-209 674.0
HKD3_k127_8032172_1 cyclic nucleotide-binding K10914 - - 0.0000000000000000000000001736 114.0
HKD3_k127_8060066_0 4-hydroxyphenylacetate 3-hydroxylase C terminal K14534 - 4.2.1.120,5.3.3.3 7.6e-234 731.0
HKD3_k127_8060066_1 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006218 398.0
HKD3_k127_8060066_2 LAO AO transport system K07588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008049 358.0
HKD3_k127_8060066_3 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005405 284.0
HKD3_k127_8060066_4 ATP-grasp domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003623 247.0
HKD3_k127_8060066_5 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.00000000000000000000000000000000000000000000000000009955 189.0
HKD3_k127_8060066_6 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.000000000000000000000000000000000000002607 153.0
HKD3_k127_8084209_0 Thiamine pyrophosphate enzyme, central domain K06890 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 597.0
HKD3_k127_8099639_0 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.00000000000000000000000000000000000000000000000000000000001248 215.0
HKD3_k127_8099639_1 Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms K07027 - - 0.000000000000000002797 97.0
HKD3_k127_8108715_0 NMT1-like family K07080 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001405 337.0
HKD3_k127_8108715_1 Carboxyl transferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000106 276.0
HKD3_k127_8139289_0 PFAM NAD-dependent epimerase dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005773 503.0
HKD3_k127_8139289_1 Large family of predicted nucleotide-binding domains - - - 0.000000000000000000002658 94.0
HKD3_k127_8139289_2 Cupin domain - - - 0.00000000000000000001603 94.0
HKD3_k127_8151549_0 PFAM aminotransferase class I and II K10206,K14261 - 2.6.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 584.0
HKD3_k127_8151549_1 amino acid-binding ACT domain protein K00003 - 1.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 506.0
HKD3_k127_8151549_2 Proposed homoserine kinase K15635 - 5.4.2.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001848 498.0
HKD3_k127_8151549_3 ferredoxin oxidoreductase K00174 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003663 383.0
HKD3_k127_8151549_4 conserved protein (DUF2088) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002915 339.0
HKD3_k127_8151549_5 PFAM Thiamine pyrophosphate K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002445 324.0
HKD3_k127_8151549_6 Aldolase/RraA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 287.0
HKD3_k127_8151549_7 oxidoreductase gamma subunit K00177 - 1.2.7.3 0.00000000000000000000000000000000000000000000000000008446 191.0
HKD3_k127_8151549_8 acyl-CoA thioester hydrolase, YbgC YbaW family K07107 - - 0.000000000000000000000000000000000000002466 150.0
HKD3_k127_8151549_9 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein K00176 - 1.2.7.3 0.000000000000000000001226 97.0
HKD3_k127_8177270_0 PFAM aminotransferase, class I and II K00812 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002029 485.0
HKD3_k127_8177270_1 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 GO:0003674,GO:0003824,GO:0004595,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 0.000000000000000000000000000000000000000000000000000000000000000007679 228.0
HKD3_k127_8177270_2 NUDIX domain K03574 - 3.6.1.55 0.000000000000000000000000000000000000000000000000002664 186.0
HKD3_k127_8177270_3 Conserved hypothetical protein 95 K08316 - 2.1.1.171 0.000000000000000000000000000000000000000000000001531 180.0
HKD3_k127_8182768_0 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 1.013e-196 630.0
HKD3_k127_8182768_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 6.098e-195 613.0
HKD3_k127_8182768_2 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008893 608.0
HKD3_k127_8182768_3 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.00000000000000000000000000000000000000000000000000000007664 199.0
HKD3_k127_8182768_4 PTS HPr component phosphorylation site K11189 - - 0.0000000000000000000000293 103.0
HKD3_k127_8199705_0 CoA binding domain K01905,K22224 - 6.2.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 520.0
HKD3_k127_8199705_1 Penicillin amidase K01434 - 3.5.1.11 0.000000000001962 70.0
HKD3_k127_8204507_0 PFAM pyruvate flavodoxin ferredoxin oxidoreductase domain protein K00174 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003774 451.0
HKD3_k127_8204507_1 PFAM Thiamine pyrophosphate K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003589 308.0
HKD3_k127_8204507_2 Dihydrodipicolinate reductase, N-terminus K21672 - 1.4.1.12,1.4.1.26 0.0000000000000000000000000000000000000000001059 165.0
HKD3_k127_8204507_3 Dihydrodipicolinate reductase, N-terminus K21672 - 1.4.1.12,1.4.1.26 0.000000000000000000000000000000000000000003503 159.0
HKD3_k127_8204507_4 PFAM Pyruvate K00177 - 1.2.7.3 0.000000000000000000001665 98.0
HKD3_k127_8204507_5 4 iron, 4 sulfur cluster binding K00176 - 1.2.7.3 0.0000000000000002459 83.0
HKD3_k127_8244654_0 PFAM Methylmalonyl-CoA mutase K01847,K01848 - 5.4.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009288 538.0
HKD3_k127_8244654_1 Dehydratase family K01687 - 4.2.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002686 543.0
HKD3_k127_8244654_2 carnitine dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003498 424.0
HKD3_k127_8244654_3 aldo keto reductase K07079 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 321.0
HKD3_k127_8244654_4 Zinc-binding dehydrogenase K00008,K21616 - 1.1.1.14,1.1.1.407 0.00000000000000000000000000000000000000000000000000000000000000000000000000002412 272.0
HKD3_k127_8244654_5 TIGRFAM methylmalonyl-CoA mutase C-terminal domain K01849 - 5.4.99.2 0.000000000000000000000000000000000000000000000000000000001183 202.0
HKD3_k127_8244654_6 protocatechuate 3,4-dioxygenase activity K03333 - 1.1.3.6 0.0000000000000000000000000000000000000000000000000008343 196.0
HKD3_k127_8244654_7 Elongation factor K02358 GO:0000278,GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0003824,GO:0003924,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0006996,GO:0007030,GO:0007049,GO:0008135,GO:0008150,GO:0008152,GO:0008283,GO:0009058,GO:0009059,GO:0009295,GO:0009636,GO:0009987,GO:0010033,GO:0010256,GO:0010467,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0019538,GO:0019866,GO:0031090,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0034641,GO:0034645,GO:0042221,GO:0042493,GO:0042645,GO:0043043,GO:0043170,GO:0043209,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045471,GO:0046677,GO:0050896,GO:0070013,GO:0071704,GO:0071840,GO:0097159,GO:0097305,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901700 - 0.000000001141 67.0
HKD3_k127_8253824_0 NAD binding K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000003087 268.0
HKD3_k127_8253824_1 Belongs to the thiolase family K00626,K07823 - 2.3.1.174,2.3.1.9 0.000000000000000000000000000000000000000000000000000001566 194.0
HKD3_k127_8253824_2 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0000000000000000000000000004258 123.0
HKD3_k127_8253824_3 Hsp20/alpha crystallin family - - - 0.0000000000000000000006033 102.0
HKD3_k127_8253824_4 - - - - 0.000003939 56.0
HKD3_k127_8258491_0 IMS family HHH motif K02346 GO:0008150,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009650,GO:0050896 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 382.0
HKD3_k127_8258491_1 HD domain - - - 0.0000000000000000000000000000000000000000001078 164.0
HKD3_k127_8258491_2 PFAM regulatory protein, MarR - - - 0.00000000000000005934 85.0
HKD3_k127_8258491_3 Glutathione peroxidase - - - 0.00000000000006988 75.0
HKD3_k127_8258491_5 Tetratricopeptide TPR_2 repeat protein - - - 0.000002973 57.0
HKD3_k127_8258491_6 SCO1/SenC K06196 - - 0.00001262 49.0
HKD3_k127_8281216_0 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002426 534.0
HKD3_k127_8281216_1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - - - 0.00000000000001763 79.0
HKD3_k127_8298929_0 Carboxyl transferase domain K19312 GO:0003674,GO:0003824,GO:0004658,GO:0016421,GO:0016874,GO:0016885 2.1.3.15,6.4.1.2,6.4.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000312 551.0
HKD3_k127_8298929_1 Tripartite tricarboxylate transporter TctA family K07793 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000526 529.0
HKD3_k127_8298929_2 PFAM L-carnitine dehydratase bile acid-inducible protein F K18702 - 2.8.3.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002355 386.0
HKD3_k127_8298929_3 Tripartite tricarboxylate transporter family receptor K07795 - - 0.00000000000000000000000000000000000000000000000000000000000000000006165 243.0
HKD3_k127_8298929_4 PFAM Transposase DDE domain - - - 0.000000000000000000000000000000000000000000000000000000000002716 213.0
HKD3_k127_8298929_5 FCD - - - 0.000000000000000000000000000009934 127.0
HKD3_k127_8298929_6 Tripartite tricarboxylate transporter TctB family K07794 - - 0.0007477 48.0
HKD3_k127_8319_0 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599,K14080 - 2.1.1.246,4.1.1.37 0.0000000000000000000000000000000000000000000000000000000005723 215.0
HKD3_k127_8319_1 Major Facilitator Superfamily - - - 0.000000000000000000000003825 116.0
HKD3_k127_834902_0 TIGRFAM lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002743 438.0
HKD3_k127_834902_1 Cyclic nucleotide-monophosphate binding domain K04739 - - 0.0000000000000000000000000000000000001124 155.0
HKD3_k127_8355101_0 Conserved region in glutamate synthase - - - 7.893e-225 709.0
HKD3_k127_8355101_1 D-galactarate dehydratase altronate hydrolase domain protein K16850 - 4.2.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003288 343.0
HKD3_k127_8355101_2 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008455 318.0
HKD3_k127_8355101_3 KR domain K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001458 295.0
HKD3_k127_8355101_4 PFAM 2Fe-2S -binding K03518,K07302,K13483 - 1.2.5.3,1.3.99.16 0.00000000000000000000000000000000000000000000000000000000000000001435 227.0
HKD3_k127_8355101_5 SAF domain protein K16849 - 4.2.1.7 0.00000000000000000001411 96.0
HKD3_k127_8355101_6 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278,K00767 - 1.4.3.16,2.4.2.19 0.000005769 48.0
HKD3_k127_8356_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 1.201e-301 940.0
HKD3_k127_8356_1 AIR synthase related protein domain protein K01933 - 6.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002868 308.0
HKD3_k127_8356_2 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003399 312.0
HKD3_k127_8356_3 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003464 269.0
HKD3_k127_8356_4 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.0000000000000000000003101 98.0
HKD3_k127_841892_0 D-isomer specific 2-hydroxyacid dehydrogenase catalytic region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007235 249.0
HKD3_k127_841892_1 Putative serine dehydratase domain - - - 0.000000000000000000000000000000000000000000000009436 178.0
HKD3_k127_8425052_0 PFAM Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004064 436.0
HKD3_k127_8425052_1 PFAM CoA-binding domain protein K01905,K22224 - 6.2.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000002994 265.0
HKD3_k127_8425052_2 Bacterial extracellular solute-binding protein K02020 - - 0.000000000000000000000000000000003728 139.0
HKD3_k127_8472731_0 response regulator K07714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008039 534.0
HKD3_k127_8472731_1 histidine kinase, HAMP - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005169 300.0
HKD3_k127_8481900_0 extracellular alpha-helical protein K06894 - - 0.0 1144.0
HKD3_k127_8481900_1 ATPase related to the helicase subunit of the Holliday junction resolvase K07478 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007926 494.0
HKD3_k127_8481900_2 alpha-2-macroglobulin domain protein K06894 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006505 380.0
HKD3_k127_8481900_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000001482 166.0
HKD3_k127_8481900_4 Belongs to the bacterial histone-like protein family K05788 - - 0.00000000000000000000000001495 112.0
HKD3_k127_8481900_5 Putative zinc-finger - - - 0.00000000000000000000001899 102.0
HKD3_k127_8502753_0 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 401.0
HKD3_k127_8502753_1 Aldolase/RraA - - - 0.0000000000000000000000000000000000000000000002252 178.0
HKD3_k127_8518524_0 formyl-CoA transferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003269 445.0
HKD3_k127_8518524_1 Belongs to the metallo-dependent hydrolases superfamily. NagA family K01443 - 3.5.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000001897 266.0
HKD3_k127_8518524_2 beta-lactamase domain protein - - - 0.000000000000000000000000000001512 132.0
HKD3_k127_8518524_3 Tetratricopeptide repeat - - - 0.0000000001244 62.0
HKD3_k127_8528267_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002262 366.0
HKD3_k127_8528267_1 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007496 356.0
HKD3_k127_8528267_2 regulation of RNA biosynthetic process - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002854 340.0
HKD3_k127_8528267_3 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 GO:0000217,GO:0000400,GO:0000724,GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003824,GO:0004386,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007154,GO:0008150,GO:0008152,GO:0009314,GO:0009378,GO:0009379,GO:0009432,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0022607,GO:0031668,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0033554,GO:0034641,GO:0042802,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051259,GO:0051260,GO:0051262,GO:0051276,GO:0051289,GO:0051716,GO:0065003,GO:0071103,GO:0071496,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1902494 3.6.4.12 0.0000000000000000000000000000000000000000000000005874 187.0
HKD3_k127_8528267_4 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.000000000000000000000000000000000001081 147.0
HKD3_k127_8557614_0 Required for chromosome condensation and partitioning K03529 - - 6.733e-244 795.0
HKD3_k127_8557614_1 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 2.269e-232 739.0
HKD3_k127_8557614_2 PFAM glycyl-tRNA synthetase, alpha subunit K01878 - 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000044 527.0
HKD3_k127_8557614_3 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004275 396.0
HKD3_k127_8557614_4 PIN domain - - - 0.000000000000000000000000000000000000000000009269 165.0
HKD3_k127_8557614_5 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.000000000000000000000006379 103.0
HKD3_k127_8557614_6 late embryogenesis abundant protein - - - 0.00000000000000529 82.0
HKD3_k127_8569211_0 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001661 286.0
HKD3_k127_8569211_1 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000002598 236.0
HKD3_k127_8569211_2 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000000000001216 210.0
HKD3_k127_8576160_0 Phosphofructokinase K21071 - 2.7.1.11,2.7.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002457 596.0
HKD3_k127_8576160_1 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016072,GO:0016075,GO:0019439,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 2.7.7.56 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000267 304.0
HKD3_k127_8576160_2 PFAM Radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000002259 226.0
HKD3_k127_8576160_3 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.000000000000000000000000000000000000000000000000000000001306 210.0
HKD3_k127_8576160_4 Beta-propeller domains of methanol dehydrogenase type K06872 - - 0.000000000000000000000000000000000000000000000000000000002559 209.0
HKD3_k127_8576160_5 PFAM LemA family K03744 - - 0.000000000000000000000000000000000000000000000000000002732 197.0
HKD3_k127_8576160_6 TPM domain - - - 0.00000000000000000000000000000000000000006054 155.0
HKD3_k127_8588637_0 DNA photolyase K01669 - 4.1.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006185 608.0
HKD3_k127_8588637_1 PFAM Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738,K19515 - 1.2.7.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 434.0
HKD3_k127_8588637_10 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.000000000000000000000000000000005987 135.0
HKD3_k127_8588637_11 Rubrerythrin - - - 0.00001005 49.0
HKD3_k127_8588637_2 DegT/DnrJ/EryC1/StrS aminotransferase family K10907 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 370.0
HKD3_k127_8588637_3 PFAM peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009606 363.0
HKD3_k127_8588637_4 TIGRFAM peptidase T-like protein K01258 - 3.4.11.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 325.0
HKD3_k127_8588637_5 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001652 300.0
HKD3_k127_8588637_6 lactate racemase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005799 265.0
HKD3_k127_8588637_7 SMP-30/Gluconolaconase/LRE-like region - - - 0.00000000000000000000000000000000000000000000000000000000000003031 226.0
HKD3_k127_8588637_8 Domain in cystathionine beta-synthase and other proteins. K04767 - - 0.000000000000000000000000000000000000000000000000000000003116 206.0
HKD3_k127_8588637_9 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000008529 172.0
HKD3_k127_8593591_0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain K01955 - 6.3.5.5 1.3e-322 998.0
HKD3_k127_8593591_1 Belongs to the CarA family K01956 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003339 477.0
HKD3_k127_8593591_2 DegT/DnrJ/EryC1/StrS aminotransferase family K19715 - 2.6.1.109 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000017 386.0
HKD3_k127_8593591_3 PFAM Three-deoxy-D-manno-octulosonic-acid transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005891 324.0
HKD3_k127_8593591_4 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000004312 265.0
HKD3_k127_8593591_5 Pfam Iron-containing alcohol dehydrogenase K00001 - 1.1.1.1 0.0000001547 53.0
HKD3_k127_8600861_0 Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002659 401.0
HKD3_k127_8600861_1 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001945 299.0
HKD3_k127_8641827_0 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 1.592e-226 720.0
HKD3_k127_8641827_1 carbohydrate kinase FGGY K00851 - 2.7.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 474.0
HKD3_k127_8641827_2 Anion-transporting ATPase K01551 - 3.6.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 361.0
HKD3_k127_8641827_3 response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001867 318.0
HKD3_k127_8641827_4 Pfam Response regulator receiver - - - 0.00000000000000000000000000000002022 130.0
HKD3_k127_8652046_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003702 535.0
HKD3_k127_8652046_1 PHP-associated K07053 - 3.1.3.97 0.00000000000000000000000000000000000000000000000000005806 196.0
HKD3_k127_8683386_0 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005186 355.0
HKD3_k127_8683386_1 FCD - - - 0.0000000000000000000000000000000000000005109 157.0
HKD3_k127_8683386_2 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000003642 152.0
HKD3_k127_8683386_3 TIGRFAM hydro-lyase, Fe-S type, tartrate fumarate subfamily, alpha subunit K01677 - 4.2.1.2 0.00000000000000000000000001483 120.0
HKD3_k127_8691968_0 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K18983 - 5.5.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008683 582.0
HKD3_k127_8691968_1 PFAM ATP-binding region, ATPase domain protein - - - 0.00000000000000000000000000000000000000001847 168.0
HKD3_k127_8691968_2 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01501 - 3.5.5.1 0.0000000000000000000000000000000000008071 140.0
HKD3_k127_8713823_0 PFAM Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 582.0
HKD3_k127_8713823_1 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002 325.0
HKD3_k127_8713823_2 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970,K00974 - 2.7.7.19,2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 321.0
HKD3_k127_8713823_3 PFAM 4Fe-4S ferredoxin K08358 - - 0.00000000000000000000000000000002257 129.0
HKD3_k127_8713823_4 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000000000009428 106.0
HKD3_k127_8725444_0 PAS domain K13598 - 2.7.13.3 3.343e-232 740.0
HKD3_k127_8725444_1 PFAM carboxyl transferase K01966 - 2.1.3.15,6.4.1.3 1.053e-216 685.0
HKD3_k127_8725444_10 Amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001155 282.0
HKD3_k127_8725444_11 exodeoxyribonuclease I activity - - - 0.00000000000000000009861 91.0
HKD3_k127_8725444_12 - - - - 0.000000000000000002269 89.0
HKD3_k127_8725444_13 sequence-specific DNA binding - - - 0.000000000000007433 81.0
HKD3_k127_8725444_14 nuclease activity - - - 0.0000000000000471 78.0
HKD3_k127_8725444_15 - - - - 0.0007747 43.0
HKD3_k127_8725444_2 3-Oxoacyl- acyl-carrier-protein (ACP) synthase III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 609.0
HKD3_k127_8725444_3 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001442 586.0
HKD3_k127_8725444_4 response regulator K13599 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000285 571.0
HKD3_k127_8725444_5 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300,K08301 - 3.1.26.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000667 554.0
HKD3_k127_8725444_6 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000213 371.0
HKD3_k127_8725444_7 D-isomer specific 2-hydroxyacid dehydrogenase catalytic K00015 - 1.1.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006017 333.0
HKD3_k127_8725444_8 penicillin-binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001362 331.0
HKD3_k127_8725444_9 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535,K13599 - 3.5.1.108 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002052 322.0
HKD3_k127_8763984_0 Glycogen debranching enzyme - - - 0.0 1572.0
HKD3_k127_8763984_1 Alpha amylase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003491 608.0
HKD3_k127_8763984_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002711 338.0
HKD3_k127_8763984_3 Surface antigen - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006343 309.0
HKD3_k127_8763984_4 Mechanosensitive ion channel K16052 - - 0.0000000000000000000000000000000000000000000000000000000000002797 217.0
HKD3_k127_8763984_5 YMGG-like Gly-zipper - - - 0.0000000000000000000000000000000000000000006182 162.0
HKD3_k127_8763984_6 alpha amylase, catalytic region - - - 0.00000000000000000000000000002693 119.0
HKD3_k127_8763984_7 - - - - 0.00000000000003819 79.0
HKD3_k127_8763984_8 - - - - 0.00000000103 61.0
HKD3_k127_8764565_0 cyclic 2,3-diphosphoglycerate synthetase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001809 552.0
HKD3_k127_8764565_1 Family 5 K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006542 450.0
HKD3_k127_8764565_2 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005599 351.0
HKD3_k127_8764565_3 Transposase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000033 319.0
HKD3_k127_8764565_4 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000001 248.0
HKD3_k127_8764565_5 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000004596 179.0
HKD3_k127_8770281_0 PFAM pyruvate flavodoxin ferredoxin oxidoreductase domain protein K00174,K00186 - 1.2.7.11,1.2.7.3,1.2.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003495 453.0
HKD3_k127_8770281_1 PFAM Thiamine pyrophosphate K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 402.0
HKD3_k127_8770281_2 Helix-turn-helix XRE-family like proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002159 259.0
HKD3_k127_8770281_3 Pyruvate ferredoxin/flavodoxin oxidoreductase K00177 - 1.2.7.3 0.0000000000000000000000000000000000000000000000004858 183.0
HKD3_k127_8770281_4 PFAM UBA THIF-type NAD FAD binding protein - - - 0.00000000000000000000000000000004725 135.0
HKD3_k127_8770281_5 4Fe-4S binding domain K00176 - 1.2.7.3 0.00000000000000000000783 93.0
HKD3_k127_8771512_0 PFAM Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 4.72e-220 700.0
HKD3_k127_8771512_1 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K03520,K18020 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0016491,GO:0016903,GO:0043546,GO:0044424,GO:0044464,GO:0048037,GO:0050662,GO:0055114,GO:0097159,GO:1901363 1.2.5.3,1.2.99.8 1.231e-199 647.0
HKD3_k127_8771512_10 reductase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000009736 205.0
HKD3_k127_8771512_11 xanthine dehydrogenase activity K04109 - 1.3.7.9 0.00000000000000000000000000000000000000000000006601 184.0
HKD3_k127_8771512_12 endoribonuclease L-PSP K09022 - 3.5.99.10 0.000000000000000000000000000000001932 134.0
HKD3_k127_8771512_13 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000009863 81.0
HKD3_k127_8771512_14 Tripartite tricarboxylate transporter TctB family - - - 0.000000000002576 74.0
HKD3_k127_8771512_15 TRAP-type mannitol chloroaromatic compound transport system periplasmic component - - - 0.00000000001281 76.0
HKD3_k127_8771512_17 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM K03519,K18021 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0016491,GO:0016903,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.2.5.3,1.2.99.8 0.0000439 46.0
HKD3_k127_8771512_18 L-lysine 6-monooxygenase (NADPH-requiring) - - - 0.0002115 50.0
HKD3_k127_8771512_2 Tripartite tricarboxylate transporter TctA family K07793 - - 8.956e-196 625.0
HKD3_k127_8771512_3 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004779 566.0
HKD3_k127_8771512_4 Belongs to the UbiD family K16874 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002118 420.0
HKD3_k127_8771512_5 Dihydroorotate dehydrogenase K00226,K17723 - 1.3.1.1,1.3.98.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001983 358.0
HKD3_k127_8771512_6 transporter, DctM subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 304.0
HKD3_k127_8771512_7 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001754 255.0
HKD3_k127_8771512_8 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.000000000000000000000000000000000000000000000000000000000000000003004 233.0
HKD3_k127_8771512_9 Psort location Cytoplasmic, score K03518 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000008788 199.0
HKD3_k127_8775154_0 Belongs to the TPP enzyme family K01652 - 2.2.1.6 1.085e-214 680.0
HKD3_k127_8775154_1 Major facilitator superfamily MFS_1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 544.0
HKD3_k127_8775154_2 Pyridoxal-dependent decarboxylase conserved domain K01634 - 4.1.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000395 466.0
HKD3_k127_8775154_3 PFAM iron-containing alcohol dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003971 433.0
HKD3_k127_8775154_4 Alcohol dehydrogenase GroES-like domain K00004 - 1.1.1.303,1.1.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 369.0
HKD3_k127_8775154_5 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 315.0
HKD3_k127_8775154_6 PFAM Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000000009879 203.0
HKD3_k127_8775154_7 GlcNAc-PI de-N-acetylase - - - 0.0000000000000000000000000000000000000000000000000000004919 201.0
HKD3_k127_8775154_8 methyltransferase - - - 0.000000000000000000000000000000000000000000000002536 179.0
HKD3_k127_8775154_9 Cupin 2, conserved barrel domain protein - - - 0.0000000000005601 75.0
HKD3_k127_8777387_0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K01835 - 5.4.2.2 6.935e-263 818.0
HKD3_k127_8777387_1 Chase2 domain K01768,K07814 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004649 578.0
HKD3_k127_8777387_10 - - - - 0.0000000000000000000000001641 108.0
HKD3_k127_8777387_11 chlorophyll binding K03286 - - 0.0000000000000000000006067 99.0
HKD3_k127_8777387_12 Cytidylate kinase-like family - - - 0.000000000000000002099 94.0
HKD3_k127_8777387_13 Colicin V production protein K03558 - - 0.000000000000009964 81.0
HKD3_k127_8777387_14 PilZ domain - - - 0.0001769 49.0
HKD3_k127_8777387_2 phosphorelay signal transduction system K02481,K07713,K07714 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007637 478.0
HKD3_k127_8777387_3 peptidase M42 family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002825 448.0
HKD3_k127_8777387_4 PFAM Radical SAM K04070 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007786 385.0
HKD3_k127_8777387_5 AsmA-like C-terminal region K07290 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009454 400.0
HKD3_k127_8777387_6 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 301.0
HKD3_k127_8777387_7 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000001359 219.0
HKD3_k127_8777387_8 HEAT repeats - - - 0.0000000000000000000000000000000000000000000000000002158 206.0
HKD3_k127_8777387_9 PFAM TatD-related deoxyribonuclease K03424 - - 0.000000000000000000000000000000001419 139.0
HKD3_k127_877856_0 Oligopeptidase F K08602 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002499 601.0
HKD3_k127_877856_1 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00282 GO:0001505,GO:0003674,GO:0003824,GO:0004375,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005960,GO:0006082,GO:0006520,GO:0006544,GO:0006807,GO:0008150,GO:0008152,GO:0009069,GO:0009987,GO:0016491,GO:0016638,GO:0016642,GO:0017144,GO:0019752,GO:0032991,GO:0042133,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901605,GO:1902494,GO:1990204 1.4.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002349 487.0
HKD3_k127_877856_2 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002957 454.0
HKD3_k127_877856_3 PFAM short chain dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002114 318.0
HKD3_k127_877856_4 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.000000000000000000000000000000000000000004598 159.0
HKD3_k127_877856_5 Protein of unknown function (DUF2889) - - - 0.000000000000000000000000002475 118.0
HKD3_k127_877856_6 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000001958 69.0
HKD3_k127_877856_7 - - - - 0.0000008623 56.0
HKD3_k127_8786228_0 VWA containing CoxE family protein K09989 - - 9.562e-195 613.0
HKD3_k127_8786228_1 AAA domain (Cdc48 subfamily) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001947 455.0
HKD3_k127_8786228_2 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.0009522 42.0
HKD3_k127_8786548_0 TIGRFAM acetyl coenzyme A synthetase (ADP forming), alpha domain - - - 6.354e-303 940.0
HKD3_k127_8786548_1 TIGRFAM acetyl coenzyme A synthetase (ADP forming), alpha domain K01905,K22224 - 6.2.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008781 566.0
HKD3_k127_8786548_2 introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX K03404,K03405 - 6.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006867 547.0
HKD3_k127_8786548_3 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000000000000000002617 207.0
HKD3_k127_8786548_4 COG0857 BioD-like N-terminal domain of phosphotransacetylase K06873 - - 0.0000000000000000000000000000001029 135.0
HKD3_k127_8800521_0 TRAP transporter, 4TM 12TM fusion protein - - - 3.83e-291 908.0
HKD3_k127_8800521_1 Glutamine amidotransferase domain K00764 - 2.4.2.14 1.501e-229 718.0
HKD3_k127_8800521_10 Succinyl-CoA synthetase, alpha subunit K02381 - - 0.000000002739 59.0
HKD3_k127_8800521_2 PFAM Alcohol dehydrogenase K13953 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005523 493.0
HKD3_k127_8800521_3 TIGRFAM TRAP transporter solute receptor, TAXI family K07080 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 426.0
HKD3_k127_8800521_4 Protein of unknown function (DUF1116) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006115 419.0
HKD3_k127_8800521_5 CoA-ligase K01902,K02381 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0009361,GO:0032991,GO:0042709,GO:0044424,GO:0044444,GO:0044464,GO:0045239,GO:1902494 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 407.0
HKD3_k127_8800521_6 Domain of unknown function (DUF1850) - - - 0.000000000000000000000000000000000000000000001562 170.0
HKD3_k127_8800521_7 Cupin domain - - - 0.00000000000000001955 86.0
HKD3_k127_8800521_9 Histidine kinase - - - 0.000000000002371 76.0
HKD3_k127_8846692_0 Psort location CytoplasmicMembrane, score - - - 6.454e-228 728.0
HKD3_k127_8846692_1 PFAM NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009377 264.0
HKD3_k127_8846692_2 xanthine dehydrogenase activity K11178 - 1.17.1.4 0.00000000000000000000000000000000000000000000000000000000001739 218.0
HKD3_k127_8846692_3 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella - - - 0.000000009225 57.0
HKD3_k127_8846692_4 Tripartite tricarboxylate transporter TctB family - - - 0.00000005178 57.0
HKD3_k127_8850556_0 Domain of unknown function (DUF362) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002039 301.0
HKD3_k127_8850556_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000001178 242.0
HKD3_k127_8850556_2 Rubrerythrin - - - 0.00000000000000000000000000000000000000000000006948 175.0
HKD3_k127_8850556_3 Alpha/beta hydrolase family K06889 - - 0.00000000000000000000000000000000000409 142.0
HKD3_k127_8861354_0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003467 476.0
HKD3_k127_8861354_1 Acyl CoA acetate 3-ketoacid CoA transferase beta subunit K01040 - 2.8.3.12 0.00000000000000000000000000000000000000000000000000000000000000003401 235.0
HKD3_k127_8861354_2 Protein involved in outer membrane biogenesis - - - 0.000000000000000000000000000000001269 139.0
HKD3_k127_8861354_4 COG1788 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit K01039 - 2.8.3.12 0.0000000000000000000000000000005418 128.0
HKD3_k127_8861354_5 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain - - - 0.00000000000005072 72.0
HKD3_k127_8861354_6 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit K01028,K01039 - 2.8.3.12,2.8.3.5 0.000000002043 62.0
HKD3_k127_8879299_0 PFAM Type II secretion system protein E K02454 - - 4.956e-246 770.0
HKD3_k127_8879299_1 General secretion pathway protein F K02455 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004107 437.0
HKD3_k127_8879299_2 PFAM nickel-dependent hydrogenase, large subunit K14126 - 1.8.98.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002755 409.0
HKD3_k127_8879299_3 ABC-type polysaccharide polyol phosphate transport system ATPase component K09691 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003514 328.0
HKD3_k127_8879299_4 ABC-2 type transporter K09688,K09690 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004055 294.0
HKD3_k127_8879299_5 general secretion pathway protein G K02456 - - 0.00000000000000000000000000000000000000000000000000003084 191.0
HKD3_k127_8879299_6 Probably plays a role in a hydrogenase nickel cofactor insertion step K04651 - - 0.000000000000000000000000000000000000001877 149.0
HKD3_k127_8879299_7 spore germination K03605 - - 0.00000000000000000000000000001122 124.0
HKD3_k127_8879299_8 cell adhesion K02457,K02650,K02682 - - 0.00000000000000000000000000008186 130.0
HKD3_k127_8883723_0 Periplasmic binding protein K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003043 535.0
HKD3_k127_8883723_1 Alpha/beta hydrolase family K22318 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005776 405.0
HKD3_k127_8883723_2 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000816 354.0
HKD3_k127_8883723_3 ATPases associated with a variety of cellular activities K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003237 306.0
HKD3_k127_8883723_4 leucine import across plasma membrane K01997,K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005462 310.0
HKD3_k127_8883723_5 ATPases associated with a variety of cellular activities K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 289.0
HKD3_k127_8883723_6 - - - - 0.00000002824 62.0
HKD3_k127_8910493_0 TIGRFAM acetyl coenzyme A synthetase (ADP forming), alpha domain K01905,K22224 - 6.2.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007796 360.0
HKD3_k127_8910493_1 THUMP domain K07444 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006216 293.0
HKD3_k127_8910493_2 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000004694 241.0
HKD3_k127_8910493_3 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000002812 169.0
HKD3_k127_8910493_4 heme binding - - - 0.0000000000000000000000000000000000000008003 158.0
HKD3_k127_8910493_5 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0008693,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0019171,GO:0019752,GO:0032787,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0047451,GO:0071704,GO:0072330,GO:1901576 4.2.1.59 0.0000000000000000000000000008804 118.0
HKD3_k127_8910493_6 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.0000000000000000001362 89.0
HKD3_k127_8910493_7 - - - - 0.0000000001549 65.0
HKD3_k127_8917174_0 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000616 457.0
HKD3_k127_8917174_1 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005848 333.0
HKD3_k127_8917174_2 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 K01000 - 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009394 308.0
HKD3_k127_8931578_0 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K06147,K11085 - - 2.7e-229 723.0
HKD3_k127_8931578_1 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 374.0
HKD3_k127_8931578_2 Oxidoreductase family, NAD-binding Rossmann fold K09949 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 336.0
HKD3_k127_8931578_3 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 336.0
HKD3_k127_8931578_4 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009163 320.0
HKD3_k127_8931578_5 Protein of unknown function (DUF1009) K09949 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004432 273.0
HKD3_k127_8931578_6 Outer membrane protein (OmpH-like) K06142 - - 0.00000000000000000000000000001053 126.0
HKD3_k127_8931578_7 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.000000000000867 70.0
HKD3_k127_8948087_0 Homeodomain-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 408.0
HKD3_k127_8948087_1 AAA domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003396 295.0
HKD3_k127_8948087_2 Transposase for insertion sequences IS1326 IS1353 (IS21 IS408 IS1162 family protein) - - - 0.00000000000000000000000000000000000000000000000000000000003292 220.0
HKD3_k127_8948087_3 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.000000000000000000000000000000000000000000000000000001188 194.0
HKD3_k127_8951696_0 Transketolase, thiamine diphosphate binding domain K00615 - 2.2.1.1 4.206e-290 904.0
HKD3_k127_8951696_1 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01733 - 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005837 428.0
HKD3_k127_8951696_2 PFAM 6-phosphogluconate dehydrogenase NAD-binding K00033 - 1.1.1.343,1.1.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004399 393.0
HKD3_k127_8951696_3 Glycosyl transferase family 2 K09931 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001852 394.0
HKD3_k127_8951696_4 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616,K13810 - 2.2.1.2,5.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000182 374.0
HKD3_k127_8951696_5 Aminotransferase K10907 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002654 276.0
HKD3_k127_8951696_6 Belongs to the enoyl-CoA hydratase isomerase family K07546 - - 0.0000000000000000000000000000000000000000000000000000000000000000000058 243.0
HKD3_k127_8951696_7 cobalamin binding K00548 - 2.1.1.13 0.000000000000000000000000000000000000000000000000000000000000001137 226.0
HKD3_k127_8951696_8 Gram-negative-bacterium-type cell wall biogenesis - GO:0000270,GO:0005575,GO:0005623,GO:0005886,GO:0006022,GO:0006807,GO:0008150,GO:0008152,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0030203,GO:0031224,GO:0042546,GO:0043164,GO:0043170,GO:0044085,GO:0044425,GO:0044464,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:1901135,GO:1901564 - 0.000000000000000000000297 104.0
HKD3_k127_8953928_0 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002228 476.0
HKD3_k127_8953928_1 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 308.0
HKD3_k127_8953928_2 Transcriptional regulator K07722 - - 0.000000000000000000000000000000000000000000000001235 183.0
HKD3_k127_8953928_3 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.0000000000000000000000000000000002291 138.0
HKD3_k127_8953928_4 - - - - 0.000000000000001376 87.0
HKD3_k127_8953928_5 Protein of unknown function (DUF3343) - - - 0.0000000000000939 73.0
HKD3_k127_8956084_0 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006704 382.0
HKD3_k127_8956084_1 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002322 307.0
HKD3_k127_8957388_0 Aldo/keto reductase family K07079 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001442 318.0
HKD3_k127_8957388_1 - - - - 0.000000000000000000000000000000000000000000001795 175.0
HKD3_k127_8960514_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000162 469.0
HKD3_k127_8960514_1 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001784 327.0
HKD3_k127_8969253_0 ATP-grasp domain K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002597 281.0
HKD3_k127_8969253_1 ATP-grasp domain K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000003444 235.0
HKD3_k127_8969253_2 methyltransferase - - - 0.00000000001271 76.0
HKD3_k127_8989291_0 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003172 371.0
HKD3_k127_8989291_1 Histidine kinase - - - 0.00000000000000000000004279 103.0
HKD3_k127_9010291_0 PFAM 2-nitropropane dioxygenase NPD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000033 606.0
HKD3_k127_9010291_1 PFAM Acyl-CoA dehydrogenase N terminal K00248 - 1.3.8.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004143 497.0
HKD3_k127_9010291_2 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000001977 234.0
HKD3_k127_9027806_0 PFAM 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase K06898 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 322.0
HKD3_k127_9027806_1 Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes K09121 - 4.99.1.12 0.00000000000000000000000000000000000000000000000000000000186 205.0
HKD3_k127_9027806_2 COGs COG1253 Hemolysins and related protein containing CBS domains - - - 0.0000006143 52.0
HKD3_k127_9106089_0 TonB-dependent receptor K16092 - - 0.00000000000003105 79.0
HKD3_k127_9106089_1 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0000002447 61.0
HKD3_k127_9110334_0 BFD-like [2Fe-2S] binding domain K00111 - 1.1.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005134 476.0
HKD3_k127_9110334_1 Belongs to the HAD-like hydrolase superfamily K02566 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005347 307.0
HKD3_k127_9110334_2 TIGRFAM Glycerol-3-phosphate dehydrogenase, anaerobic B subunit K00112 - 1.1.5.3 0.00000000000000000000000000001596 123.0
HKD3_k127_9128479_0 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009841 287.0
HKD3_k127_9128479_1 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.000000000000000000000000000000000000000000000000001749 188.0
HKD3_k127_9128479_2 Ribosomal L25p family K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000009672 174.0
HKD3_k127_9128479_3 PFAM MazG nucleotide pyrophosphohydrolase K02428,K02499 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006213,GO:0006220,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009147,GO:0009149,GO:0009151,GO:0009155,GO:0009164,GO:0009166,GO:0009199,GO:0009200,GO:0009203,GO:0009204,GO:0009208,GO:0009210,GO:0009211,GO:0009213,GO:0009215,GO:0009217,GO:0009218,GO:0009219,GO:0009222,GO:0009223,GO:0009259,GO:0009261,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042454,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0046046,GO:0046047,GO:0046051,GO:0046052,GO:0046060,GO:0046061,GO:0046070,GO:0046075,GO:0046076,GO:0046080,GO:0046081,GO:0046131,GO:0046133,GO:0046135,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658 3.6.1.66 0.000000000000001038 78.0
HKD3_k127_9132605_0 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005743 428.0
HKD3_k127_9132605_1 Jag_N K06346 - - 0.0000000000000000000000000000000000000000000000000000000316 204.0
HKD3_k127_9132605_2 haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000000000000001447 170.0
HKD3_k127_9132605_3 MazG nucleotide pyrophosphohydrolase domain - - - 0.000000000000000000000000000000007905 129.0
HKD3_k127_9132605_4 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.00000000000000000000000001199 111.0
HKD3_k127_9132605_5 protein conserved in bacteria - - - 0.0000000000000000000000002866 109.0
HKD3_k127_9132605_6 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.000000000000000000000002616 105.0
HKD3_k127_9132605_7 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.0000000000000000007155 90.0
HKD3_k127_9132605_8 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.0000000000003062 70.0
HKD3_k127_9174647_0 TIGRFAM zinc-binding alcohol dehydrogenase family protein K13953 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000003899 250.0
HKD3_k127_9174647_1 Major Facilitator Superfamily - - - 0.00000000000009052 83.0
HKD3_k127_9197927_0 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.0000000000000000000000000000005374 127.0
HKD3_k127_9197927_1 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0030312,GO:0034641,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 0.000000000000000000000000003608 115.0
HKD3_k127_9197927_2 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000891 94.0
HKD3_k127_9197927_3 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.00000000000000000124 98.0
HKD3_k127_9197927_4 PFAM short-chain dehydrogenase reductase SDR - - - 0.0000000005095 71.0
HKD3_k127_9240299_0 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004743 406.0
HKD3_k127_9240299_1 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004521 389.0
HKD3_k127_9240299_2 Riboflavin synthase K00793 - 2.5.1.9 0.00000000000000000000000000000000000000000000000000000000000000826 223.0
HKD3_k127_9240299_3 ATP cone domain K07738 - - 0.000000000000000000000000000000000000000000000000000000000002199 213.0
HKD3_k127_9337503_0 Belongs to the thiolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007819 416.0
HKD3_k127_9337503_1 Conserved carboxylase domain K01571 - 4.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008442 412.0
HKD3_k127_9337503_2 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K01571,K02160 - 4.1.1.3 0.000000000000000000000000000392 120.0
HKD3_k127_9337503_3 Bacterial regulatory proteins, tetR family - - - 0.0000000000001313 78.0
HKD3_k127_9347933_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 3.934e-226 723.0
HKD3_k127_9347933_1 Psort location CytoplasmicMembrane, score - - - 1.836e-213 689.0
HKD3_k127_9347933_2 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000612 501.0
HKD3_k127_9347933_3 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS K03518 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000003917 234.0
HKD3_k127_9347933_4 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM CutM-like protein K03519 - 1.2.5.3 0.0000000000000000000000000000000000000000000000002718 186.0
HKD3_k127_9347933_5 Dihydroorotate dehydrogenase K00226,K17723 - 1.3.1.1,1.3.98.1 0.000000000000000000000000000000000000143 143.0
HKD3_k127_936701_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003822 583.0
HKD3_k127_936701_1 DAHP synthetase I family K01627 - 2.5.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002805 375.0
HKD3_k127_936701_2 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 - 3.1.3.45 0.00000000000000006875 82.0
HKD3_k127_9377982_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005748 470.0
HKD3_k127_9377982_1 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00824 - 2.6.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000005772 261.0
HKD3_k127_9377982_2 PFAM flavin reductase domain protein FMN-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000102 237.0
HKD3_k127_9377982_3 hydrolase - - - 0.0000000000000000000000000000000000000000000000000000004888 200.0
HKD3_k127_939085_0 PFAM carboxyl transferase K01966 - 2.1.3.15,6.4.1.3 7.914e-202 640.0
HKD3_k127_939085_1 Binding-protein-dependent transport system inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000231 355.0
HKD3_k127_939085_2 Psort location CytoplasmicMembrane, score - - - 0.00000000000000000000000000002782 124.0
HKD3_k127_939085_3 Lipopolysaccharide assembly protein A domain K08992 - - 0.000006591 53.0
HKD3_k127_9395230_0 PFAM NADH flavin oxidoreductase NADH oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004024 305.0
HKD3_k127_9395230_1 PFAM Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001468 272.0
HKD3_k127_9395230_2 Acyltransferase family - - - 0.00000000000000000000000000000000000000000000000000407 197.0
HKD3_k127_9460518_0 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001647 257.0
HKD3_k127_9460518_1 Maf-like protein K06287 - - 0.00000000000000000000000000000000000000000000000000000002917 204.0
HKD3_k127_9460518_2 Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000000000000000000000576 191.0
HKD3_k127_9460518_3 Protein of unknown function (DUF3014) - - - 0.000000000002059 73.0
HKD3_k127_9460911_0 TIGRFAM phenylalanyl-tRNA synthetase, beta subunit K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 1.404e-207 667.0
HKD3_k127_9460911_1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.0000000000000000000000000000000000000011 150.0
HKD3_k127_9471542_0 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002971 282.0
HKD3_k127_9471542_1 PFAM 3-hydroxyacyl-CoA dehydrogenase domain protein K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000008907 261.0
HKD3_k127_9471542_2 Amidohydrolase family K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000001463 229.0
HKD3_k127_9471542_3 Periplasmic binding protein domain - - - 0.0000000000000000000000000000000000000000000000000000001182 210.0
HKD3_k127_9471542_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000006026 172.0
HKD3_k127_9471542_5 - - - - 0.000000000000000005932 89.0
HKD3_k127_9471542_6 Endoribonuclease L-PSP - - - 0.000000002107 64.0
HKD3_k127_9471542_7 - - - - 0.00000004773 59.0
HKD3_k127_9471542_8 ATP-independent chaperone mediated protein folding K06006 - - 0.0000004134 59.0
HKD3_k127_9479629_0 - - - - 2.001e-245 778.0
HKD3_k127_9479666_0 AMP-binding enzyme K01897 - 6.2.1.3 8.076e-246 777.0
HKD3_k127_9479666_1 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009757 433.0
HKD3_k127_9479666_2 ABC transporter K09817 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003708 286.0
HKD3_k127_9479666_3 Zinc-uptake complex component A periplasmic K09815 - - 0.000000000000000000000000000000000000000000000000000000000000000000000008322 255.0
HKD3_k127_9479666_4 ABC 3 transport family K09816 - - 0.000000000000000000000000000000000000000000000000000000000000000000005614 243.0
HKD3_k127_9479666_5 - - - - 0.0000000000000000000000000000387 119.0
HKD3_k127_9479666_6 phosphatidate phosphatase activity K01096,K19302 - 3.1.3.27,3.1.3.4,3.1.3.81,3.6.1.27 0.0000000000000000000000000008191 119.0
HKD3_k127_9479666_7 DNA integration - - - 0.0000000000000000002436 90.0
HKD3_k127_9479666_8 - - - - 0.000000001656 63.0
HKD3_k127_9479666_9 TRANSCRIPTIONal - - - 0.00000006263 54.0
HKD3_k127_9485347_0 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.00000000000000000000000000000000000000000000000000000000000000009451 226.0
HKD3_k127_9485347_2 response regulator K07814 - - 0.000000000000000005895 87.0
HKD3_k127_9504865_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003448 619.0
HKD3_k127_9504865_1 PFAM iron dependent repressor K03709 - - 0.000000000000000000000000000000000000000000000000000000000002076 220.0
HKD3_k127_9504865_2 Belongs to the Fur family K03711 - - 0.0000000000000000000000000000000000001212 147.0
HKD3_k127_951973_0 NMT1-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006286 286.0
HKD3_k127_951973_1 Zn-dependent dipeptidase, microsomal dipeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000005985 238.0
HKD3_k127_9557471_0 SMART Water Stress and Hypersensitive response - - - 0.00000000000000000000000000000000001606 140.0
HKD3_k127_9557471_2 Sugar (and other) transporter - - - 0.00000000000000000000002426 109.0
HKD3_k127_9583836_0 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001923 359.0
HKD3_k127_9583836_1 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000001258 210.0
HKD3_k127_9648329_0 Belongs to the CinA family K03742 - 3.5.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005534 344.0
HKD3_k127_9648329_1 Domain of unknown function (DUF1731) K07071 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005367 332.0
HKD3_k127_9648329_2 PFAM short-chain dehydrogenase reductase SDR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002445 334.0
HKD3_k127_9648329_3 Histone deacetylase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003984 306.0
HKD3_k127_9648329_4 - - - - 0.00000000000000000000000000000008798 131.0
HKD3_k127_999496_0 Peptidase dimerisation domain K01438 - 3.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 442.0
HKD3_k127_999496_1 Dihydroorotate dehydrogenase K00226,K17723 - 1.3.1.1,1.3.98.1 0.0000000000000000000000000000003856 127.0