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Overview

ID MAG01866
Name HKD3_bin.57
Sample SMP0048
Taxonomy
Kingdom Bacteria
Phylum Chloroflexota
Class Anaerolineae
Order Anaerolineales
Family UBA4823
Genus FEB-25
Species
Assembly information
Completeness (%) 69.49
Contamination (%) 3.61
GC content (%) 50.0
N50 (bp) 11,924
Genome size (bp) 2,798,424

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2446

Gene name Description KEGG GOs EC E-value Score Sequence
HKD3_k127_1020727_0 Belongs to the ABC transporter superfamily K05816 - 3.6.3.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 493.0
HKD3_k127_1020727_1 Belongs to the ABC transporter superfamily K05816 - 3.6.3.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003452 431.0
HKD3_k127_1020727_2 PFAM ABC transporter related - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006835 398.0
HKD3_k127_1020727_3 Binding-protein-dependent transport system inner membrane component K02026,K05815,K17243 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003556 359.0
HKD3_k127_1020727_4 PFAM binding-protein-dependent transport systems inner membrane component K02025 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006929 358.0
HKD3_k127_1020727_5 Glycosyl hydrolases family 16 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001679 316.0
HKD3_k127_1020727_7 Sugar kinase - - - 0.0001259 48.0
HKD3_k127_1020727_8 carbohydrate transport - - - 0.0001764 46.0
HKD3_k127_1056743_0 COGs COG3533 conserved K09955 - - 9.677e-234 740.0
HKD3_k127_1056743_1 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000005392 198.0
HKD3_k127_1143823_0 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000291 501.0
HKD3_k127_1143823_1 EamA-like transporter family K03298 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 292.0
HKD3_k127_1143823_2 arylsulfatase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003691 291.0
HKD3_k127_1143823_3 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001118 265.0
HKD3_k127_1143823_4 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007958 261.0
HKD3_k127_1143823_5 of the drug metabolite transporter (DMT) superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000004244 226.0
HKD3_k127_1143823_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00265,K03616,K17723 - 1.3.1.1,1.4.1.13,1.4.1.14 0.000000000000000000000000000000000000000000000000000000004129 207.0
HKD3_k127_1143823_7 Thioredoxin - - - 0.0000000000000000000000000000000226 130.0
HKD3_k127_1143823_8 TfoX N-terminal domain - - - 0.0000000000000000000000001514 111.0
HKD3_k127_1143823_9 sirohydrochlorin cobaltochelatase activity - - - 0.000009944 49.0
HKD3_k127_1159918_0 helix_turn _helix lactose operon repressor K05499 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003217 288.0
HKD3_k127_1159918_1 Haloacid dehalogenase-like hydrolase K07025 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002953 277.0
HKD3_k127_1159918_2 tagaturonate epimerase K21619 - 5.1.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000001473 245.0
HKD3_k127_1159918_3 HAD-hyrolase-like - - - 0.0000000000000006732 80.0
HKD3_k127_117520_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 2.101e-217 679.0
HKD3_k127_117520_1 PFAM PfkB domain protein K00856 - 2.7.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000664 430.0
HKD3_k127_117520_2 O-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006776 303.0
HKD3_k127_1200053_0 N-4 methylation of cytosine K00571,K00590 - 2.1.1.113,2.1.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 422.0
HKD3_k127_1200053_1 PFAM single-stranded nucleic acid binding R3H domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009874 419.0
HKD3_k127_1200053_11 DinB superfamily - - - 0.00000002301 61.0
HKD3_k127_1200053_12 Ethyl tert-butyl ether degradation - - - 0.0006382 49.0
HKD3_k127_1200053_2 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004856 272.0
HKD3_k127_1200053_3 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.0000000000000000000000000000000000000000000000000000000000000000000005103 243.0
HKD3_k127_1200053_4 Belongs to the enoyl-CoA hydratase isomerase family K15866 - 5.3.3.18 0.00000000000000000000000000000000000000000000000000000003304 208.0
HKD3_k127_1200053_5 PFAM Rhomboid family protein K19225 - 3.4.21.105 0.00000000000000000000000000000000000000000000000001597 189.0
HKD3_k127_1200053_6 Putative regulatory protein - - - 0.0000000000000000000000000000000000000000000003016 170.0
HKD3_k127_1200053_7 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins K03790 - 2.3.1.128 0.000000000000000000000000000000000004329 144.0
HKD3_k127_1200053_8 reductase K00059 - 1.1.1.100 0.00000000000000000000000000004695 125.0
HKD3_k127_1200053_9 Aminoacyl-tRNA editing domain - - - 0.0000000000000000000000000002692 120.0
HKD3_k127_1220225_0 NmrA-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005913 384.0
HKD3_k127_1220225_1 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003484 348.0
HKD3_k127_1220225_2 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000009187 126.0
HKD3_k127_1220225_3 - - - - 0.000000000000002827 81.0
HKD3_k127_1240729_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005262 350.0
HKD3_k127_1240729_1 PFAM UbiA prenyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004385 351.0
HKD3_k127_1240729_2 Ribosomal RNA methyltransferase RrmJ FtsJ K06442 - 2.1.1.226,2.1.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004168 312.0
HKD3_k127_1267701_0 Serine carboxypeptidase - - - 1.912e-219 693.0
HKD3_k127_1267701_1 UDP-glucoronosyl and UDP-glucosyl transferase K05841 - 2.4.1.173 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006017 349.0
HKD3_k127_1267701_2 glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002073 315.0
HKD3_k127_1267701_4 DinB superfamily - - - 0.0000000000000001107 86.0
HKD3_k127_1267701_5 integral membrane protein K00728 - 2.4.1.109 0.000001622 59.0
HKD3_k127_1273612_0 PFAM glycosyl transferase family 3 K00756 - 2.4.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002757 576.0
HKD3_k127_1273612_1 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001806 494.0
HKD3_k127_1273612_10 tRNA processing K04075,K21947 - 2.8.1.15,6.3.4.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001468 287.0
HKD3_k127_1273612_11 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003263 272.0
HKD3_k127_1273612_12 deaminated base DNA N-glycosylase activity K21929 GO:0003674,GO:0003824,GO:0004844,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0033958,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0048037,GO:0050896,GO:0051536,GO:0051539,GO:0051540,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0140097,GO:1901360 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000001552 262.0
HKD3_k127_1273612_13 - - - - 0.000000000000000000000000000000000000000000000000000000000000000001657 230.0
HKD3_k127_1273612_14 Phosphoglycerate mutase family K01834 - 5.4.2.11 0.000000000000000000000000000000000000000000000000000001749 198.0
HKD3_k127_1273612_15 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.00000000000000000000000000000000000000000000000001338 184.0
HKD3_k127_1273612_16 PHP-associated - - - 0.00000000000000000000000000000000000000466 154.0
HKD3_k127_1273612_17 Phosphoglycerate mutase family K01834 - 5.4.2.11 0.0000000000000000000000000000000000003455 148.0
HKD3_k127_1273612_18 Protein of unknown function (DUF2905) - - - 0.0000000000004594 71.0
HKD3_k127_1273612_2 glutamine synthetase K01915 - 6.3.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005502 463.0
HKD3_k127_1273612_3 Domain of unknown function (DUF362) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007728 396.0
HKD3_k127_1273612_4 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 398.0
HKD3_k127_1273612_5 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006507 380.0
HKD3_k127_1273612_6 PFAM LmbE family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002182 361.0
HKD3_k127_1273612_7 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005858 357.0
HKD3_k127_1273612_8 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006836 325.0
HKD3_k127_1273612_9 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate K00761 - 2.4.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 311.0
HKD3_k127_1289721_0 Molydopterin dinucleotide binding domain - - - 1.948e-218 699.0
HKD3_k127_1289721_1 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 1.469e-207 655.0
HKD3_k127_1289721_10 Protein of unknown function (DUF3341) - - - 0.00000000000000000000000000000003358 132.0
HKD3_k127_1289721_11 - - - - 0.0000000000000000000000000001534 124.0
HKD3_k127_1289721_12 - - - - 0.000000006397 65.0
HKD3_k127_1289721_13 Belongs to the MenA family. Type 1 subfamily K02548 GO:0003674,GO:0003824,GO:0004659,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0006766,GO:0006775,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009233,GO:0009234,GO:0009987,GO:0016740,GO:0016765,GO:0032194,GO:0042180,GO:0042181,GO:0042362,GO:0042371,GO:0042373,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 2.5.1.74 0.0000143 51.0
HKD3_k127_1289721_2 PFAM Polysulphide reductase, NrfD K00185 - - 1.175e-206 652.0
HKD3_k127_1289721_3 4Fe-4S dicluster domain K00184 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 336.0
HKD3_k127_1289721_4 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 299.0
HKD3_k127_1289721_5 Cytochrome c K02030,K17760,K19713 - 1.1.9.1,1.8.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001324 285.0
HKD3_k127_1289721_6 Cytochrome c7 and related cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000003511 220.0
HKD3_k127_1289721_7 COG0508 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes - - - 0.00000000000000000000000000000000000000000000000000001446 198.0
HKD3_k127_1289721_8 protein deglycation K03152,K05520,K12132 - 2.7.11.1,3.5.1.124 0.000000000000000000000000000000000000000000000000000468 193.0
HKD3_k127_1289721_9 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000003949 157.0
HKD3_k127_1318742_0 Belongs to the glycosyl hydrolase 13 family K01187 - 3.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004295 529.0
HKD3_k127_1318742_1 - - - - 0.0000007311 57.0
HKD3_k127_132002_0 introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX K03404,K03405 - 6.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002963 507.0
HKD3_k127_132002_1 von Willebrand factor (vWF) type A domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008307 405.0
HKD3_k127_132002_2 - - - - 0.0000000000000000000000000000000000000000002372 170.0
HKD3_k127_132002_3 Beta-lactamase superfamily domain - - - 0.000000000000005198 74.0
HKD3_k127_1321321_0 DNA polymerase K02337,K14162 - 2.7.7.7 1.249e-203 670.0
HKD3_k127_1321321_1 multicopper oxidases K06324 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0016679,GO:0016682,GO:0016722,GO:0052716,GO:0055114 1.16.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002419 607.0
HKD3_k127_1321321_10 Phage tail tube, TTP, lambda-like - - - 0.00000000009391 78.0
HKD3_k127_1321321_11 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003916,GO:0003918,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006265,GO:0006351,GO:0006725,GO:0006807,GO:0006996,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017111,GO:0018130,GO:0019438,GO:0032774,GO:0034335,GO:0034641,GO:0034645,GO:0034654,GO:0042221,GO:0042493,GO:0042623,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0097659,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576 5.99.1.3 0.00005386 55.0
HKD3_k127_1321321_2 TIGRFAM LAO AO transport system ATPase K07588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006909 291.0
HKD3_k127_1321321_3 Hsp70 protein K04046 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007048 271.0
HKD3_k127_1321321_4 PFAM Rubrerythrin - - - 0.0000000000000000000000000000000000000000000000000000000000000001917 226.0
HKD3_k127_1321321_5 Ferritin-like domain K03594 - 1.16.3.1 0.000000000000000000000000000000000000000000000000000000000002209 212.0
HKD3_k127_1321321_6 PFAM cobalamin B12-binding domain protein K01849 - 5.4.99.2 0.000000000000000000000000000000000000000000000000000000000003603 211.0
HKD3_k127_1321321_7 - - - - 0.00000000000000000000000000000000000000000004059 165.0
HKD3_k127_1321321_8 - - - - 0.00000000000000000000000000000000000006552 157.0
HKD3_k127_1321321_9 Multicopper oxidase - - - 0.0000000000000000000000000528 128.0
HKD3_k127_1330346_0 helix_turn_helix, Lux Regulon K03556 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003153 579.0
HKD3_k127_1330346_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008667 374.0
HKD3_k127_1330346_2 PFAM LmbE family protein K18455 - 3.5.1.115 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001531 331.0
HKD3_k127_1330346_3 PFAM LmbE family protein K18455 - 3.5.1.115 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000371 293.0
HKD3_k127_1330346_4 ABC-2 family transporter protein - - - 0.0000000000000000000000000000000000000000000000000000000000006794 220.0
HKD3_k127_1330346_5 ThiF family K03148,K21029,K21147 - 2.7.7.73,2.7.7.80,2.8.1.11 0.000000000000000000000000000000000000000000000000000000002237 205.0
HKD3_k127_1330346_6 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.000000000000004593 76.0
HKD3_k127_1330346_7 - - - - 0.000000003612 61.0
HKD3_k127_1337836_0 N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity K00819,K00821 GO:0003674,GO:0003824,GO:0004587,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006525,GO:0006527,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009987,GO:0016054,GO:0016740,GO:0016769,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 2.6.1.11,2.6.1.13,2.6.1.17 8.734e-205 642.0
HKD3_k127_1337836_1 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000682 499.0
HKD3_k127_1337836_2 PFAM Alanine dehydrogenase PNT, C-terminal domain K00259 - 1.4.1.1 0.0000000001046 63.0
HKD3_k127_13423_0 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000001648 228.0
HKD3_k127_13423_1 Two component regulator propeller - - - 0.0000000000000000000000000000000000000000000004823 172.0
HKD3_k127_13423_2 Trypsin-like serine protease - - - 0.00000000000000000000000657 111.0
HKD3_k127_1351970_0 UDP-N-acetylglucosamine 2-epimerase activity - - - 8.351e-198 633.0
HKD3_k127_1351970_1 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003686 537.0
HKD3_k127_1351970_10 Enoyl-(Acyl carrier protein) reductase K00065 - 1.1.1.127 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005669 367.0
HKD3_k127_1351970_11 PFAM short-chain dehydrogenase reductase SDR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003532 355.0
HKD3_k127_1351970_12 Glycosyl transferase, family 2 K20444 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002406 342.0
HKD3_k127_1351970_13 Protein of unknown function DUF115 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004544 322.0
HKD3_k127_1351970_14 Glycosyl transferase, family 2 K00786 GO:0003674,GO:0003824,GO:0016740,GO:0016757 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004943 321.0
HKD3_k127_1351970_15 cytidylyl-transferase K00983 - 2.7.7.43 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000138 303.0
HKD3_k127_1351970_16 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000499 272.0
HKD3_k127_1351970_17 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 - 5.1.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000003109 254.0
HKD3_k127_1351970_18 PFAM Glycosyl transferase family 2 K07011,K20444 - - 0.00000000000000000000000000000000000000000000000000000000000000000000452 246.0
HKD3_k127_1351970_19 Cytidylyltransferase K07257 - - 0.00000000000000000000000000000000000000000000000000000000000000000001438 243.0
HKD3_k127_1351970_2 3-deoxy-manno-octulosonate-8-phosphatase activity K00983,K03270 - 2.7.7.43,3.1.3.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002433 523.0
HKD3_k127_1351970_20 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000006256 244.0
HKD3_k127_1351970_21 arylsulfatase activity - - - 0.00000000000000000000000000000000000000000000000000000000814 218.0
HKD3_k127_1351970_22 Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000000000001488 198.0
HKD3_k127_1351970_23 PFAM glycosyl transferase group 1 - - - 0.00000000000000000000000000000000008283 135.0
HKD3_k127_1351970_24 methyltransferase activity - - - 0.00000000000000000004973 100.0
HKD3_k127_1351970_25 Immune inhibitor A peptidase M6 - - - 0.000000000000000007407 91.0
HKD3_k127_1351970_26 Psort location CytoplasmicMembrane, score - - - 0.000000001038 71.0
HKD3_k127_1351970_27 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000004051 59.0
HKD3_k127_1351970_28 - - - - 0.0004053 53.0
HKD3_k127_1351970_3 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791 - 5.1.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006089 509.0
HKD3_k127_1351970_4 4-phosphoerythronate dehydrogenase activity K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006143 462.0
HKD3_k127_1351970_5 NeuB family K01654 - 2.5.1.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003901 443.0
HKD3_k127_1351970_6 PFAM Nucleotidyl transferase K00973 - 2.7.7.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 436.0
HKD3_k127_1351970_7 inositol 2-dehydrogenase activity K18431 - 2.7.7.82 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006871 379.0
HKD3_k127_1351970_8 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002401 372.0
HKD3_k127_1351970_9 Glycosyltransferase like family 2 K12992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005946 373.0
HKD3_k127_1355510_0 Cation transporting ATPase, C-terminus K01531 - 3.6.3.2 2.494e-306 960.0
HKD3_k127_1355510_1 PFAM natural resistance-associated macrophage protein K03322 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000132 571.0
HKD3_k127_1355510_10 - - - - 0.0000000104 62.0
HKD3_k127_1355510_2 ABC-type multidrug transport system ATPase component K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009808 383.0
HKD3_k127_1355510_3 PFAM ABC transporter related K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005799 330.0
HKD3_k127_1355510_4 Transport permease protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008002 304.0
HKD3_k127_1355510_5 3-oxo-5-alpha-steroid 4-dehydrogenase K12343 - 1.3.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000009952 269.0
HKD3_k127_1355510_6 epimerase dehydratase K00091 - 1.1.1.219 0.00000000000000000000000000000000000000000000000000000000000000000000000009144 260.0
HKD3_k127_1355510_7 ABC-2 family transporter protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000007092 243.0
HKD3_k127_1355510_8 Universal stress protein family - - - 0.000000000000000000000000000000000000000000000000000000000000000002384 237.0
HKD3_k127_1355510_9 ABC-type transport system involved in multi-copper enzyme maturation, permease K01992 - - 0.0000000000000000000000000000000002567 143.0
HKD3_k127_1372635_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002219 533.0
HKD3_k127_1372635_1 aminotransferase class I and II K10907 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003134 493.0
HKD3_k127_1372635_10 PKD domain containing protein - - - 0.00000000000000000000000225 119.0
HKD3_k127_1372635_11 PFAM Forkhead-associated - - - 0.0000000000002655 79.0
HKD3_k127_1372635_12 Conserved repeat domain - - - 0.00000000004625 73.0
HKD3_k127_1372635_2 PFAM Nucleotidyl transferase K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008231 397.0
HKD3_k127_1372635_3 Trypsin-like peptidase domain K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005922 291.0
HKD3_k127_1372635_4 Serine threonine protein kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000002273 261.0
HKD3_k127_1372635_5 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03644,K03801 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0016740,GO:0016746,GO:0016747,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0033819,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.181,2.8.1.8 0.0000000000000000000000000000000000000000000000000000000001357 211.0
HKD3_k127_1372635_6 protein domain associated with K03595,K06883,K06946 - - 0.0000000000000000000000000000000000000000000000000001048 203.0
HKD3_k127_1372635_7 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000001237 154.0
HKD3_k127_1372635_8 PFAM regulatory protein LuxR - - - 0.000000000000000000000000000000000003544 146.0
HKD3_k127_1372635_9 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain - - - 0.00000000000000000000000000000001083 132.0
HKD3_k127_1385087_0 PFAM conserved K07027 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002074 433.0
HKD3_k127_1385087_1 PFAM amine oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 344.0
HKD3_k127_1385087_2 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008278 343.0
HKD3_k127_1385087_3 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000000001673 139.0
HKD3_k127_1385087_4 LysM domain K02020 - - 0.0000000000000000000000000000000002333 140.0
HKD3_k127_1385087_5 WD40 domain protein beta Propeller - - - 0.0000000009569 71.0
HKD3_k127_1385087_6 Involved in the tonB-independent uptake of proteins - - - 0.00006978 55.0
HKD3_k127_1408433_0 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K02182 - 6.2.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002436 304.0
HKD3_k127_1408433_1 acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005727 258.0
HKD3_k127_1408433_2 COGs COG2905 signal-transduction protein containing cAMP-binding and CBS domains - - - 0.000000000000000000000000000000000000000000002983 168.0
HKD3_k127_1408433_3 - - - - 0.0000000001859 74.0
HKD3_k127_1408433_4 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.0000000041 61.0
HKD3_k127_1408433_5 Heat shock protein DnaJ domain protein - - - 0.000005418 57.0
HKD3_k127_1424678_0 Lipopolysaccharide kinase (Kdo/WaaP) family - - - 0.000000000000000000000000000000000004491 148.0
HKD3_k127_1424678_1 Linear amide C-N hydrolases, choloylglycine hydrolase family K01442 - 3.5.1.24 0.00000000001155 76.0
HKD3_k127_1424678_2 Choloylglycine hydrolase K01442 - 3.5.1.24 0.00000000001216 71.0
HKD3_k127_1436323_0 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 9.482e-318 977.0
HKD3_k127_1436323_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 1.783e-210 662.0
HKD3_k127_1436323_2 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001335 572.0
HKD3_k127_1436323_3 SMART Nucleotide binding protein, PINc - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007469 452.0
HKD3_k127_1436323_4 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002213 355.0
HKD3_k127_1436323_5 PFAM Methyltransferase type 11 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005052 334.0
HKD3_k127_1436323_6 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007803 297.0
HKD3_k127_1436323_7 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 2.5.1.129 0.0000000000000000000000000000000000000000000000000000000000000003432 226.0
HKD3_k127_1436323_8 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000003819 215.0
HKD3_k127_1436323_9 transcriptional regulator, Rrf2 family - - - 0.000000000000000000000000000000000000000000000000000004824 192.0
HKD3_k127_1459249_0 PFAM ABC transporter related K16786,K16787 - - 1.165e-221 699.0
HKD3_k127_1459249_1 metallopeptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004234 385.0
HKD3_k127_1459249_2 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003146 364.0
HKD3_k127_1459249_3 Cobalt transport protein K16785 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000478 284.0
HKD3_k127_1459249_4 ECF-type riboflavin transporter, S component K16924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001905 257.0
HKD3_k127_1459249_5 Lysin motif - - - 0.0000000000000000000000000000000000000000000000002531 188.0
HKD3_k127_1459249_6 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.0000000000000000000000000000000003027 136.0
HKD3_k127_1464348_0 cyclic 2,3-diphosphoglycerate synthetase activity - - - 5.849e-240 746.0
HKD3_k127_1464348_1 Arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005554 591.0
HKD3_k127_1464348_2 PFAM DNA methylase N-4 N-6 K00571,K07316 - 2.1.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 296.0
HKD3_k127_1464348_3 phosphorelay signal transduction system - - - 0.000000000000000000000000003499 112.0
HKD3_k127_1464348_4 Binds directly to 16S ribosomal RNA K02968 - - 0.000000000000000002182 89.0
HKD3_k127_1464348_5 Chlorite dismutase - - - 0.00000000000000006615 83.0
HKD3_k127_1464348_6 head morphogenesis protein, SPP1 gp7 - - - 0.000000002547 65.0
HKD3_k127_1468471_0 Belongs to the thiolase family K00626,K00632 - 2.3.1.16,2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007893 581.0
HKD3_k127_1468471_1 Thiolase, C-terminal domain K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000762 282.0
HKD3_k127_1468471_2 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.00000000000000000000000000000000000000000000000000000000006131 209.0
HKD3_k127_1468471_3 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.0000000000000000000000000000000000000008682 155.0
HKD3_k127_1469825_0 Flavin containing amine oxidoreductase K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003937 432.0
HKD3_k127_1469825_1 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000866 262.0
HKD3_k127_1469825_2 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000003464 249.0
HKD3_k127_1469825_3 Group 1 family - - - 0.00000000000000000000000000000000000000001421 169.0
HKD3_k127_1469825_4 - - - - 0.0000102 49.0
HKD3_k127_1469825_5 Squalene phytoene synthase - - - 0.0006041 51.0
HKD3_k127_1486735_0 Belongs to the PEP-utilizing enzyme family K01007 - 2.7.9.2 1.8e-298 933.0
HKD3_k127_1486735_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 1.455e-291 910.0
HKD3_k127_1486735_10 Endonuclease containing a URI domain K07461 - - 0.000000000000000000000000000000002659 130.0
HKD3_k127_1486735_11 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.00000000000000002101 88.0
HKD3_k127_1486735_12 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802 - 5.2.1.8 0.000003126 53.0
HKD3_k127_1486735_2 PFAM peptidase M3A and M3B, thimet oligopeptidase F K08602 - - 4.144e-207 659.0
HKD3_k127_1486735_3 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 456.0
HKD3_k127_1486735_4 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007144 346.0
HKD3_k127_1486735_5 PFAM deoxynucleoside kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002101 305.0
HKD3_k127_1486735_6 SNARE associated Golgi protein K03975 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005102 284.0
HKD3_k127_1486735_7 enterobactin catabolic process K07214 - - 0.00000000000000000000000000000000000000000000000000000001603 209.0
HKD3_k127_1486735_8 biotin lipoate A B protein ligase K03524 - 6.3.4.15 0.000000000000000000000000000000000000000000000000005698 191.0
HKD3_k127_1553167_0 peptidase dimerisation domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003338 541.0
HKD3_k127_1553167_1 amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008095 527.0
HKD3_k127_1553167_10 DeoR C terminal sensor domain K02081 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005608 295.0
HKD3_k127_1553167_11 heat shock protein binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001755 295.0
HKD3_k127_1553167_12 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001621 291.0
HKD3_k127_1553167_13 Homocysteine S-methyltransferase K00548 - 2.1.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000001025 253.0
HKD3_k127_1553167_14 Cytochrome c7 and related cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000003643 238.0
HKD3_k127_1553167_15 heat shock protein binding - - - 0.000000000000000000000000000000000000000000000000000000007058 218.0
HKD3_k127_1553167_16 ferredoxin-NADP+ reductase activity - - - 0.0000000000000000000000000000000000000000000000000000001024 206.0
HKD3_k127_1553167_17 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.000000000000000000000000000000000000000000000000002257 190.0
HKD3_k127_1553167_18 TIGRFAM F420-dependent oxidoreductase K12234 - 6.3.2.31,6.3.2.34 0.000000000000000000000000000000000000000000000004686 177.0
HKD3_k127_1553167_19 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000004092 164.0
HKD3_k127_1553167_2 Tagatose 6 phosphate kinase K16371 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003439 456.0
HKD3_k127_1553167_20 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000008563 184.0
HKD3_k127_1553167_21 Protein of unknown function (DUF1361) - - - 0.00000000000000000000000000000000000000002592 160.0
HKD3_k127_1553167_22 protein conserved in bacteria - - - 0.000000000000000000000000000002426 126.0
HKD3_k127_1553167_23 4Fe-4S dicluster domain - - - 0.0000000000001123 74.0
HKD3_k127_1553167_24 4Fe-4S binding domain protein - - - 0.000000000001419 70.0
HKD3_k127_1553167_3 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000162 395.0
HKD3_k127_1553167_4 carbohydrate transport K02027 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003102 367.0
HKD3_k127_1553167_5 SIS domain K00820 - 2.6.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007238 346.0
HKD3_k127_1553167_6 Protein of unknown function (DUF1385) K09153 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 342.0
HKD3_k127_1553167_7 transmembrane transport K02025,K05814,K10118,K10237,K10241,K15771,K17235,K17242,K17316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 337.0
HKD3_k127_1553167_8 pfkB family carbohydrate kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001744 324.0
HKD3_k127_1553167_9 glycerophosphodiester transmembrane transport K02026 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001747 321.0
HKD3_k127_1570145_0 PFAM transglutaminase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007159 316.0
HKD3_k127_1573037_0 carboxylic acid catabolic process K02549 GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009233,GO:0009234,GO:0009987,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 4.2.1.113 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003784 408.0
HKD3_k127_1573037_1 NmrA-like family K00329,K00356 - 1.6.5.3,1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000001116 259.0
HKD3_k127_1573037_2 Putative cyclase K07130 - 3.5.1.9 0.0000000000000000000000000000000000000000000000000000000000008534 216.0
HKD3_k127_1573037_3 carboxylic acid catabolic process - - - 0.000000000000000000000000000000000000000000000000000001985 201.0
HKD3_k127_1573037_4 Phosphatidylethanolamine-binding protein K06910 - - 0.0000003559 55.0
HKD3_k127_1573037_5 transporter K03292 - - 0.0000003772 53.0
HKD3_k127_1573396_0 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002328 334.0
HKD3_k127_1573396_1 PFAM glutamine amidotransferase class-I K07010 - - 0.000000000000000000000000000000000000000000000000000000000008714 215.0
HKD3_k127_1573396_2 Acetyltransferase - - - 0.00000000000000000000000000000000000000000000005506 175.0
HKD3_k127_1573396_3 Domain of unknown function (DUF1905) - - - 0.000000000000000000000000000000001634 138.0
HKD3_k127_1573396_4 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000008137 101.0
HKD3_k127_1573396_5 NmrA-like family - - - 0.0000001815 53.0
HKD3_k127_1584811_0 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006382 413.0
HKD3_k127_1584811_1 PFAM ABC transporter related K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004619 316.0
HKD3_k127_1584811_2 C-terminal four TMM region of protein-O-mannosyltransferase K00728 - 2.4.1.109 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002125 313.0
HKD3_k127_1584811_3 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000009073 164.0
HKD3_k127_1584811_4 Hydrolase, NUDIX family K03574,K17816 - 3.6.1.55,3.6.1.56 0.0000000000000000000000000000000000000006725 153.0
HKD3_k127_1584811_5 DUF218 domain - - - 0.00000000000002333 81.0
HKD3_k127_1584811_6 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0002768 53.0
HKD3_k127_1587591_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 4.034e-312 978.0
HKD3_k127_1587591_1 Saccharopine dehydrogenase K00290 - 1.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 422.0
HKD3_k127_1587591_10 Belongs to the peptidase S8 family - - - 0.000000000000000000005903 108.0
HKD3_k127_1587591_11 Phospholipid methyltransferase - - - 0.000000000000000002641 94.0
HKD3_k127_1587591_2 Ornithine cyclodeaminase/mu-crystallin family K01750,K19244 - 1.4.1.1,4.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001417 352.0
HKD3_k127_1587591_3 PFAM extracellular solute-binding protein, family 5 K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006119 283.0
HKD3_k127_1587591_4 PFAM Methyltransferase type 11 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004946 254.0
HKD3_k127_1587591_5 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002399 253.0
HKD3_k127_1587591_6 domain protein - - - 0.000000000000000000000000000000000000000000000000000000000007859 227.0
HKD3_k127_1587591_7 Methyltransferase - - - 0.000000000000000000000000000000000000000000000003071 183.0
HKD3_k127_1587591_8 MarR family - - - 0.0000000000000000000000000000000000006217 148.0
HKD3_k127_1587591_9 VIT family - - - 0.00000000000000000000000000002389 127.0
HKD3_k127_1590871_0 MoeA domain protein domain I and II K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003273 464.0
HKD3_k127_1590871_1 PBP superfamily domain K03750,K07219 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000002012 263.0
HKD3_k127_1590871_2 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000001037 192.0
HKD3_k127_1590871_3 Belongs to the MenA family. Type 1 subfamily K02548 - 2.5.1.74 0.00000000000000000000000000000000000007293 148.0
HKD3_k127_161321_0 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001848 415.0
HKD3_k127_161321_1 PFAM histidine triad (HIT) protein K19710 - 2.7.7.53 0.00000000000000000000000000000000000000000000000000007895 190.0
HKD3_k127_161321_2 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000001312 130.0
HKD3_k127_1714287_0 Orotidine-5-phosphate decarboxylase orotate phosphoribosyltransferase K01591,K13421 - 2.4.2.10,4.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003289 464.0
HKD3_k127_1714287_1 Protein of unknown function (DUF3048) C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000305 335.0
HKD3_k127_1714287_2 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004863 322.0
HKD3_k127_1714287_3 Domain of unknown function (DUF4126) - - - 0.000000000000000000000000000000000000000000000000009727 182.0
HKD3_k127_1714287_4 Predicted membrane protein (DUF2085) - - - 0.000000000000000000000000000000000000000000000002004 183.0
HKD3_k127_1714287_5 Aspartate carbamoyltransferase. Source PGD - - - 0.000000000000000000006691 92.0
HKD3_k127_1740342_0 C-terminal binding-module, SLH-like, of glucodextranase - - - 1.35e-302 958.0
HKD3_k127_1740342_1 Alpha amylase, catalytic domain K01208 - 3.2.1.133,3.2.1.135,3.2.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004638 486.0
HKD3_k127_1740342_2 Two component regulator propeller - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006743 437.0
HKD3_k127_1740342_3 sh3 domain protein K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000003538 174.0
HKD3_k127_1740342_4 maltose binding K15770,K15771 - - 0.000000000000000000000000000000001505 149.0
HKD3_k127_1740342_5 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000006667 124.0
HKD3_k127_1740342_6 iron-sulfur cluster insertion protein erpA K15724 - - 0.00000000000000000000001505 105.0
HKD3_k127_1740342_7 virion core protein (lumpy skin disease virus) - - - 0.0002211 51.0
HKD3_k127_1740542_0 Phosphoribulokinase / Uridine kinase family K00876 - 2.7.1.48 3.56e-211 666.0
HKD3_k127_1740542_1 Malic enzyme, N-terminal domain K00027 - 1.1.1.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007836 456.0
HKD3_k127_1740542_2 Zn_pept - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005176 276.0
HKD3_k127_1836551_0 NADH dehydrogenase K00335 - 1.6.5.3 4.408e-248 779.0
HKD3_k127_1836551_1 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000076 399.0
HKD3_k127_1836551_2 4Fe-4S binding domain K02572 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001686 272.0
HKD3_k127_1836551_3 TIGRFAM reductive dehalogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005056 262.0
HKD3_k127_1836551_4 PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334 - 1.6.5.3 0.0000000000000000000000000000000000000000000000003791 179.0
HKD3_k127_1836551_5 4Fe-4S ferredoxin, iron-sulfur binding - - - 0.0000000000000000000000000000000000000000223 174.0
HKD3_k127_1836551_6 Glycosyl transferase family group 2 K07011 - - 0.000000000007843 67.0
HKD3_k127_1836551_7 helix_turn_helix, Lux Regulon K02479,K07692 - - 0.00004571 52.0
HKD3_k127_1935339_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 GO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.5 0.0 1177.0
HKD3_k127_1935339_1 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004986 502.0
HKD3_k127_1935339_10 - - - - 0.0000000002431 68.0
HKD3_k127_1935339_2 Aspartate-ammonia ligase K01914 - 6.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000493 473.0
HKD3_k127_1935339_3 PFAM Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008883 433.0
HKD3_k127_1935339_4 TIGRFAM polymorphic outer membrane protein K21449 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001341 411.0
HKD3_k127_1935339_5 TIGRFAM Hopanoid biosynthesis associated radical SAM protein HpnJ K04034 - 1.21.98.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 329.0
HKD3_k127_1935339_6 Belongs to the alkaline phosphatase family - - - 0.000000000000000000000000000000000000142 165.0
HKD3_k127_1935339_7 CAAX protease self-immunity - - - 0.00000000000000000000000000000001273 136.0
HKD3_k127_1935339_8 Zn-dependent hydrolases of the beta-lactamase fold - - - 0.000000000000000000000000000004995 130.0
HKD3_k127_2113184_0 PFAM amidohydrolase K01468 - 3.5.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009899 550.0
HKD3_k127_2113184_1 Peptidoglycan-binding LysM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000226 449.0
HKD3_k127_2113184_2 maltose binding K02027,K15770 - - 0.000000000000000000000000000000000000000000000000000000000000000000002817 247.0
HKD3_k127_2113184_4 RelE-like toxin of type II toxin-antitoxin system HigB K07334 - - 0.00000000000000000000000000000000000000105 149.0
HKD3_k127_2113184_5 XRE family K21498 - - 0.000000000000000000000000000000000000002798 148.0
HKD3_k127_2132240_0 histidine kinase, dimerisation and phosphoacceptor region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000138 331.0
HKD3_k127_2132240_1 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000007869 231.0
HKD3_k127_2132240_2 proteasomal ubiquitin-independent protein catabolic process K10456 GO:0000151,GO:0001701,GO:0001887,GO:0003674,GO:0003779,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005700,GO:0005703,GO:0005737,GO:0005783,GO:0005815,GO:0005829,GO:0005856,GO:0005884,GO:0005911,GO:0005912,GO:0005913,GO:0005924,GO:0005925,GO:0006355,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006950,GO:0006979,GO:0007275,GO:0008092,GO:0008104,GO:0008134,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009719,GO:0009725,GO:0009790,GO:0009792,GO:0009889,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010468,GO:0010498,GO:0010499,GO:0010556,GO:0010604,GO:0010605,GO:0010629,GO:0012505,GO:0014070,GO:0015629,GO:0015630,GO:0016043,GO:0016567,GO:0016579,GO:0019219,GO:0019222,GO:0019538,GO:0019904,GO:0019941,GO:0022607,GO:0030054,GO:0030055,GO:0030162,GO:0030163,GO:0030496,GO:0030856,GO:0031323,GO:0031325,GO:0031326,GO:0031329,GO:0031331,GO:0031461,GO:0031463,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032434,GO:0032436,GO:0032446,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0034097,GO:0035902,GO:0036211,GO:0042176,GO:0042221,GO:0042802,GO:0042803,GO:0042994,GO:0043009,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043433,GO:0043632,GO:0043687,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0045185,GO:0045595,GO:0045604,GO:0045682,GO:0045732,GO:0045862,GO:0046983,GO:0048518,GO:0048519,GO:0048522,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051090,GO:0051171,GO:0051173,GO:0051179,GO:0051220,GO:0051235,GO:0051239,GO:0051246,GO:0051247,GO:0051252,GO:0051259,GO:0051603,GO:0051716,GO:0051865,GO:0060255,GO:0061136,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070161,GO:0070646,GO:0070647,GO:0070670,GO:0070887,GO:0071310,GO:0071345,GO:0071353,GO:0071407,GO:0071704,GO:0071840,GO:0080090,GO:0097066,GO:0097718,GO:0098687,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:1901564,GO:1901565,GO:1901575,GO:1901800,GO:1902494,GO:1903050,GO:1903052,GO:1903362,GO:1903364,GO:1903506,GO:1990234,GO:2000026,GO:2000058,GO:2000060,GO:2000112,GO:2001141 - 0.00000000000000000002482 108.0
HKD3_k127_2132240_3 WD40-like Beta Propeller Repeat K03641 - - 0.000000000000000001174 102.0
HKD3_k127_2132240_4 BTB And C-terminal Kelch - - - 0.000000000001941 82.0
HKD3_k127_215579_0 Transcriptional activator domain - - - 4.66e-225 735.0
HKD3_k127_215579_1 HD domain K07814 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004738 419.0
HKD3_k127_215579_2 Transport permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000002409 238.0
HKD3_k127_215579_3 domain, Protein - - - 0.000000000000000000000000000000000000000000000004241 194.0
HKD3_k127_215579_4 ABC transporter K01990 - - 0.00000000000000000000000000000000000000007329 154.0
HKD3_k127_215579_5 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000006185 143.0
HKD3_k127_215579_6 PFAM zinc finger, SWIM domain protein - - - 0.000000000000000000000000009142 110.0
HKD3_k127_215579_7 - - - - 0.000000000000000002048 86.0
HKD3_k127_2186220_0 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 7.986e-215 677.0
HKD3_k127_2186220_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 481.0
HKD3_k127_2186220_2 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein K00341 - 1.6.5.3 0.000001536 51.0
HKD3_k127_2190616_0 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 3.179e-209 658.0
HKD3_k127_2190616_1 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001881 458.0
HKD3_k127_2190616_2 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 - 2.7.7.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004896 334.0
HKD3_k127_2190616_3 PFAM YbbR family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009409 334.0
HKD3_k127_2190616_4 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 - 4.1.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000001329 266.0
HKD3_k127_2190616_5 Acyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001559 265.0
HKD3_k127_2190616_6 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000008257 198.0
HKD3_k127_2190616_7 PFAM NUDIX hydrolase K01515 - 3.6.1.13 0.0000000000000000000000000000000000000000000009241 171.0
HKD3_k127_2190616_8 Acyltransferase family - - - 0.000000000000000000000000000000000000000000231 171.0
HKD3_k127_2190616_9 LysM domain K07273,K22278 - 3.5.1.104 0.000000000000000000000000002994 119.0
HKD3_k127_22372_0 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 1.754e-209 668.0
HKD3_k127_22372_1 regulatory protein, arsR - - - 0.00000000000000000000000000000000000000000000000000002513 194.0
HKD3_k127_22372_2 regulatory protein, arsR - - - 0.0000000000000000000000000000000000007421 145.0
HKD3_k127_22378_0 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 9.367e-210 669.0
HKD3_k127_22378_1 regulatory protein, arsR - - - 0.000000000000000000000000000000000000000000000000001475 189.0
HKD3_k127_22378_2 regulatory protein, arsR - - - 0.00000000000000000000000000000000000004387 149.0
HKD3_k127_22378_3 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000001 114.0
HKD3_k127_2294801_0 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639 - 2.3.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004016 567.0
HKD3_k127_2294801_1 RNase_H superfamily K07502 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000569 282.0
HKD3_k127_2294801_2 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K04708 - 1.1.1.102 0.000000000000000000000000000000000000000000000000000000000000000002254 237.0
HKD3_k127_2294801_3 Metalloenzyme superfamily - - - 0.000000000000000000004582 96.0
HKD3_k127_2294801_4 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0000000000000000001475 90.0
HKD3_k127_2355485_0 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 9.411e-203 640.0
HKD3_k127_2355485_1 Peptidase_C39 like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 465.0
HKD3_k127_2355485_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008377 359.0
HKD3_k127_2355485_3 beta-lactamase domain protein K05555 - - 0.000000000000000000004992 100.0
HKD3_k127_2423225_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 1.34e-233 732.0
HKD3_k127_2423225_1 peptidase M42 family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005327 463.0
HKD3_k127_2423225_2 peptidase M42 family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 434.0
HKD3_k127_2423225_3 peptidase M42 family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 360.0
HKD3_k127_2423225_4 Methylase involved in ubiquinone menaquinone biosynthesis - - - 0.000000000000000000000000000000000000000000000000000000000007209 216.0
HKD3_k127_2423225_5 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000000000000000000002338 192.0
HKD3_k127_2423225_6 PFAM LmbE family protein - - - 0.000000000000000000000000000000000000000000000000009215 189.0
HKD3_k127_2436110_0 Peptidase S9 prolyl oligopeptidase active site domain protein K01303 - 3.4.19.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003207 609.0
HKD3_k127_2436110_1 Two component transcriptional regulator, winged helix family K02483 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000219 305.0
HKD3_k127_2436110_2 saccharopine dehydrogenase activity K00290 - 1.5.1.7 0.000000000000000000000001205 105.0
HKD3_k127_2436110_3 Ribosomal protein L11 methyltransferase (PrmA) K07755,K18064 - 2.1.1.137 0.0000000000007631 78.0
HKD3_k127_2448618_0 DEAD DEAH box helicase domain protein K06877 - - 3.548e-296 933.0
HKD3_k127_2448618_1 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 4.408e-244 762.0
HKD3_k127_2448618_10 Calcineurin-like phosphoesterase - - - 0.000000000000000000000000000000000000000000000000007408 187.0
HKD3_k127_2448618_11 - - - - 0.000000000000000000000000000000006321 135.0
HKD3_k127_2448618_12 Cupin domain - - - 0.000000000000000000000002609 105.0
HKD3_k127_2448618_13 - - - - 0.000000000000000000000279 102.0
HKD3_k127_2448618_14 PFAM Vitamin B12 dependent methionine synthase, activation - - - 0.000000000000000000003161 102.0
HKD3_k127_2448618_2 BFD domain protein 2Fe-2S -binding domain protein K00111 - 1.1.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002095 602.0
HKD3_k127_2448618_3 Domain of unknown function (DUF4445) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 544.0
HKD3_k127_2448618_4 DNA binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003667 508.0
HKD3_k127_2448618_5 NAD(P)H-binding K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 494.0
HKD3_k127_2448618_6 PFAM aminotransferase class V K04127 - 5.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003613 429.0
HKD3_k127_2448618_7 PFAM oxidoreductase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000263 371.0
HKD3_k127_2448618_8 NAD-dependent epimerase dehydratase K07071 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007258 314.0
HKD3_k127_2448618_9 PFAM fumarate reductase succinate dehydrogenase flavoprotein domain protein K00112 - 1.1.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000003264 287.0
HKD3_k127_2456042_0 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005425 492.0
HKD3_k127_2456042_1 saccharopine dehydrogenase activity K19064 - 1.4.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 407.0
HKD3_k127_2487669_0 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 530.0
HKD3_k127_2487669_1 VIT family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003459 308.0
HKD3_k127_2487669_2 IA, variant 3 K07025 - - 0.00000000000000000000000000000000000000000000000000006806 194.0
HKD3_k127_2487669_3 Radical SAM - - - 0.000000000000000000000000000000000000000000000000000347 197.0
HKD3_k127_2487669_4 Copper amine oxidase N-terminal domain - - - 0.0000000000000000000000004281 111.0
HKD3_k127_2526033_0 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002363 528.0
HKD3_k127_2526033_1 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009054 466.0
HKD3_k127_2526033_2 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005554 452.0
HKD3_k127_2526033_3 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 423.0
HKD3_k127_2526033_4 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007125 409.0
HKD3_k127_2526033_5 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002799 404.0
HKD3_k127_2526033_6 Cell wall formation K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 331.0
HKD3_k127_2526033_7 Cell cycle protein K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000009565 246.0
HKD3_k127_2572038_0 Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import K02007 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001567 391.0
HKD3_k127_2572038_1 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 373.0
HKD3_k127_2572038_2 TIGRFAM cobalt ABC transporter, inner membrane subunit CbiQ K02008 - - 0.00000000000000000000000000000000000000000000000000000000000000000000006903 246.0
HKD3_k127_2572038_3 Limonene-1,2-epoxide hydrolase catalytic domain K10533 - 3.3.2.8 0.0000000000000000000000000000000000000000000000001201 182.0
HKD3_k127_2572038_4 all-trans-retinol 13,14-reductase activity K09516,K09835 - 1.3.99.23,5.2.1.13 0.00000000000000000000000000000000000000003405 154.0
HKD3_k127_2572038_5 Ferric uptake regulator family K03711,K09825 - - 0.000000000000000000000000000001327 126.0
HKD3_k127_2572038_6 Belongs to the thioredoxin family K03671 - - 0.00000000000000000000000000003552 119.0
HKD3_k127_2579116_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. HemL subfamily K01845 - 5.4.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003173 299.0
HKD3_k127_2579116_1 CoA binding domain K06929 - - 0.0000000000000000000000000000000000000009615 153.0
HKD3_k127_2579116_2 COG0508 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes - - - 0.0000000000000000000000000000000003996 139.0
HKD3_k127_2579116_3 Peptidase family M28 - - - 0.000000002905 64.0
HKD3_k127_2579116_4 COG0508 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes - - - 0.0000004037 55.0
HKD3_k127_2602410_0 PFAM Radical SAM domain protein K06941 - 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002168 407.0
HKD3_k127_2602410_1 PFAM Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 379.0
HKD3_k127_2602410_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001781 292.0
HKD3_k127_2602410_3 Coenzyme A transferase K01040 - 2.8.3.12 0.00000000000000000000000000000000000000000000000000000000000003446 219.0
HKD3_k127_2602410_4 PFAM Isochorismatase - - - 0.0000000000000000000000000000000000000000000000000000000000001303 220.0
HKD3_k127_2602410_5 Pyridine nucleotide-disulphide oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000005142 222.0
HKD3_k127_2602410_6 YCII-related domain - - - 0.0000000000000000000001362 101.0
HKD3_k127_2614378_0 Heat shock 70 kDa protein K04043 - - 9.183e-298 924.0
HKD3_k127_2614378_1 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009196 608.0
HKD3_k127_2614378_10 NUDIX domain - - - 0.0000000000000000000000000003205 128.0
HKD3_k127_2614378_11 Permease - GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944 - 0.00000000002517 75.0
HKD3_k127_2614378_2 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 - 2.9.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002145 531.0
HKD3_k127_2614378_3 Metallopeptidase family M24 K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007748 498.0
HKD3_k127_2614378_4 PFAM glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005657 492.0
HKD3_k127_2614378_5 PFAM major facilitator superfamily MFS_1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002116 473.0
HKD3_k127_2614378_6 PFAM peptidase C60, sortase A and B K07284 - 3.4.22.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004135 314.0
HKD3_k127_2614378_7 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006787 317.0
HKD3_k127_2614378_8 Heparinase II/III-like protein - - - 0.000000000000000000000000000000000000000000000001347 188.0
HKD3_k127_2623837_0 carbohydrate transport K02027 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008133 532.0
HKD3_k127_2623837_1 PFAM binding-protein-dependent transport systems inner membrane component K02025 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007522 430.0
HKD3_k127_2623837_2 glycerophosphodiester transmembrane transport K02026 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007454 417.0
HKD3_k127_2623837_3 helix_turn _helix lactose operon repressor K02529 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008123 322.0
HKD3_k127_2623837_4 -O-antigen - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006097 277.0
HKD3_k127_2623837_5 BadF/BadG/BcrA/BcrD ATPase family - - - 0.0000000000000000000000000000000000000000000000000000000000003672 216.0
HKD3_k127_2623837_6 domain, Protein - - - 0.0000000000000000000000000000000236 128.0
HKD3_k127_2623837_7 COG3944 Capsular polysaccharide biosynthesis protein K08252 - 2.7.10.1 0.0006113 50.0
HKD3_k127_264322_0 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 2e-200 653.0
HKD3_k127_264322_1 PFAM type II secretion system protein E K02283 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004234 573.0
HKD3_k127_264322_10 PFAM Radical SAM domain protein - - - 0.0000000000000000000000000000000000000000001052 162.0
HKD3_k127_264322_11 chromosome segregation - - - 0.00000000000000000000000005457 113.0
HKD3_k127_264322_12 - - - - 0.000000000000000001358 90.0
HKD3_k127_264322_13 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) K07755 - 2.1.1.137 0.000000000000008045 84.0
HKD3_k127_264322_2 GH3 auxin-responsive promoter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002119 490.0
HKD3_k127_264322_3 NB-ARC domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 434.0
HKD3_k127_264322_4 Streptomycin adenylyltransferase K05593 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003254 330.0
HKD3_k127_264322_5 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001632 313.0
HKD3_k127_264322_6 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002861 248.0
HKD3_k127_264322_7 Ferritin-like - - - 0.0000000000000000000000000000000000000000000000000000000000002013 220.0
HKD3_k127_264322_8 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000006327 190.0
HKD3_k127_264322_9 Putative stress-induced transcription regulator - - - 0.00000000000000000000000000000000000000000001588 169.0
HKD3_k127_2656262_0 helix_turn_helix, Lux Regulon K03556 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005029 573.0
HKD3_k127_2656262_1 Putative redox-active protein (C_GCAxxG_C_C) - - - 0.000000000000000000000000000001837 126.0
HKD3_k127_2661475_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 1.631e-225 715.0
HKD3_k127_2661475_1 PFAM Alcohol dehydrogenase GroES-like domain K00008 - 1.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001894 363.0
HKD3_k127_2661475_2 AAA domain K02282 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004592 275.0
HKD3_k127_2661475_3 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000005047 245.0
HKD3_k127_2661475_4 Coenzyme A transferase K01028,K01039 - 2.8.3.12,2.8.3.5 0.00000000000000000000000000000000000000000000000205 183.0
HKD3_k127_2661475_5 Haloacid dehalogenase-like hydrolase K07025,K18551 - - 0.00000000000000000000000000000000000000000000001358 178.0
HKD3_k127_2661475_6 Histidine kinase K07636 - 2.7.13.3 0.000000000000000000000000000000000002166 153.0
HKD3_k127_2696096_0 PFAM multicopper oxidase type 2 - - - 2.657e-275 867.0
HKD3_k127_2696096_1 SPTR Q471D1 TPR repeat Bacterial transcriptional activator domain Tetratricopeptide TPR_4 - - - 6.724e-218 714.0
HKD3_k127_2696096_11 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) K03594 - 1.16.3.1 0.000000008828 63.0
HKD3_k127_2696096_13 TIGRFAM outer membrane autotransporter barrel domain - - - 0.0003433 53.0
HKD3_k127_2696096_2 Uncharacterised ACR (DUF711) K09157 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004526 372.0
HKD3_k127_2696096_3 protein methyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002816 356.0
HKD3_k127_2696096_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001533 280.0
HKD3_k127_2696096_5 NmrA-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000008264 230.0
HKD3_k127_2696096_6 Steryl acetyl hydrolase K14731 - 3.1.1.83 0.00000000000000000000000000000000000000000000000000000000000007634 222.0
HKD3_k127_2696096_7 phosphoserine phosphatase activity K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000735 233.0
HKD3_k127_2696096_8 peptidoglycan turnover - - - 0.000000000000000000000000000000000000000000000000000002774 208.0
HKD3_k127_2696096_9 Domain of unknown function DUF302 - - - 0.0000000000000000000000000000003028 128.0
HKD3_k127_2697232_0 in asymptomatic bacteriuria E. coli strains 83972 and VR50, the ygiD gene is upregulated during biofilm formation in urine K15777 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004423 325.0
HKD3_k127_2697232_1 Family 4 glycosyl hydrolase K01222 - 3.2.1.86 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008833 307.0
HKD3_k127_2697232_2 PFAM Diacylglycerol kinase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000003639 225.0
HKD3_k127_2697232_3 Phosphate acyltransferases K00655 - 2.3.1.51 0.000000000000000000000000000000000018 143.0
HKD3_k127_2697232_4 - - - - 0.0000000000000007663 79.0
HKD3_k127_2739299_0 (ABC) transporter K06147,K11085 - - 2.894e-246 774.0
HKD3_k127_2739299_1 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001756 526.0
HKD3_k127_2739299_10 Protein of unknown function (DUF2089) - - - 0.0000000000000000000000000000000000000002171 153.0
HKD3_k127_2739299_11 - - - - 0.000000000000000000000000000000001265 145.0
HKD3_k127_2739299_12 PFAM Appr-1-p processing domain protein - - - 0.0000000000000000000000000000005242 126.0
HKD3_k127_2739299_13 - - - - 0.000000000000000000000002993 107.0
HKD3_k127_2739299_15 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins - - - 0.000000000000000000003551 100.0
HKD3_k127_2739299_16 domain, Protein - - - 0.0000000004956 70.0
HKD3_k127_2739299_2 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 426.0
HKD3_k127_2739299_3 ATPases associated with a variety of cellular activities K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006475 367.0
HKD3_k127_2739299_4 PFAM ABC transporter related K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002594 362.0
HKD3_k127_2739299_5 PFAM sugar isomerase (SIS) K00820 - 2.6.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001752 323.0
HKD3_k127_2739299_6 Family 4 glycosyl hydrolase K01222 - 3.2.1.86 0.00000000000000000000000000000000000000000000000000000000000000000000000000002726 264.0
HKD3_k127_2739299_7 Chromate resistance exported protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003492 257.0
HKD3_k127_2739299_8 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.00000000000000000000000000000000000000000000000000000000000155 219.0
HKD3_k127_2739299_9 PFAM secretion protein HlyD family protein K01993 - - 0.00000000000000000000000000000000000000000000000000995 198.0
HKD3_k127_2750058_0 ATP-dependent transcriptional regulator, MalT-like, LuxR family K03556 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 432.0
HKD3_k127_2750058_1 RHS repeat-associated core domain - - - 0.000000002003 66.0
HKD3_k127_2760074_0 Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively K06215 - 4.3.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003298 514.0
HKD3_k127_2760074_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002195 480.0
HKD3_k127_2760074_10 metal-binding, possibly nucleic acid-binding protein K07040 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0040007,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000002384 181.0
HKD3_k127_2760074_11 Domain of unknown function (DUF1905) - - - 0.000000000000000000000000000000000000000000000251 173.0
HKD3_k127_2760074_13 helix_turn_helix gluconate operon transcriptional repressor K07979 - - 0.0000000000000000001652 94.0
HKD3_k127_2760074_14 PFAM ATPase family associated with various cellular activities (AAA) - - - 0.00001036 48.0
HKD3_k127_2760074_2 PFAM band 7 protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004223 424.0
HKD3_k127_2760074_3 histidine kinase, dimerisation and phosphoacceptor region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004987 368.0
HKD3_k127_2760074_4 Deoxynucleoside kinase K15518 - 2.7.1.113 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002125 292.0
HKD3_k127_2760074_5 Adenosine specific kinase K09129 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001648 275.0
HKD3_k127_2760074_6 Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS K08681 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0032991,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046184,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617,GO:1902494,GO:1903600 4.3.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003054 268.0
HKD3_k127_2760074_7 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.0000000000000000000000000000000000000000000000000000000000000000000003268 243.0
HKD3_k127_2760074_9 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000507 190.0
HKD3_k127_2774940_0 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000003801 117.0
HKD3_k127_2774940_1 cellulose binding - - - 0.0000000000000000003821 98.0
HKD3_k127_2774940_2 Domain of unknown function DUF11 - - - 0.00000000000000026 92.0
HKD3_k127_2774940_3 Domain of unknown function (DUF1906) - - - 0.00000000000001335 84.0
HKD3_k127_2794703_0 L-lysine catabolic process to acetate K18013 - 2.3.1.247 0.0000000000000000000000000000000002704 134.0
HKD3_k127_2794703_1 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.00000000000000000000000000000003466 136.0
HKD3_k127_2795126_0 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003944 528.0
HKD3_k127_2795126_1 PFAM Aminotransferase class I and II K14155 - 4.4.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007957 445.0
HKD3_k127_2795126_2 D-isomer specific 2-hydroxyacid dehydrogenase K00058,K16843 - 1.1.1.310,1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009781 346.0
HKD3_k127_2795126_3 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005238 334.0
HKD3_k127_2795126_4 PFAM secretion protein HlyD family protein K02005 - - 0.0000000000000000000000000000000000000000000000000000000356 204.0
HKD3_k127_2795126_5 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues K01299 - 3.4.17.19 0.0000000000000007201 79.0
HKD3_k127_2804046_0 COGs COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003984 297.0
HKD3_k127_2804046_1 4Fe-4S binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006738 277.0
HKD3_k127_2804046_2 CAAX protease self-immunity K07052 - - 0.000000000000000000000000000000000000000000000000000000001854 210.0
HKD3_k127_2804046_3 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000005453 183.0
HKD3_k127_2805608_0 Thermophilic metalloprotease (M29) K19689 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005782 514.0
HKD3_k127_2805608_1 PFAM Isoprenylcysteine carboxyl methyltransferase - - - 0.0000000000000000000000000000000000000000000001334 177.0
HKD3_k127_2805608_3 coenzyme F420 binding - - - 0.00000000000000000000000000009708 123.0
HKD3_k127_2805608_4 Acetamidase/Formamidase family K01426 - 3.5.1.4 0.00000000000000002226 86.0
HKD3_k127_2888731_0 Elongator protein 3, MiaB family, Radical SAM - - - 6.347e-263 824.0
HKD3_k127_2888731_1 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 417.0
HKD3_k127_2888731_2 TIGRFAM drug resistance transporter, EmrB QacA subfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005391 374.0
HKD3_k127_2888731_3 Protease prsW family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007805 280.0
HKD3_k127_2888731_4 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 0.00000000000000000000000000000000000000000000000000000000000000000002001 235.0
HKD3_k127_2888731_5 Uncharacterized protein conserved in bacteria (DUF2344) - - - 0.00000000000000000000000000000000000000000000008253 175.0
HKD3_k127_2888731_6 Tetratricopeptide TPR_2 repeat protein - - - 0.000000001998 67.0
HKD3_k127_289393_0 PFAM fumarate reductase succinate dehydrogenase flavoprotein domain protein K00239 - 1.3.5.1,1.3.5.4 3.043e-223 696.0
HKD3_k127_289393_1 Cytochrome b K03887 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000855 246.0
HKD3_k127_289393_2 Cytochrome b(C-terminal)/b6/petD K00412 - - 0.000000000000000000000000001612 119.0
HKD3_k127_289393_3 Rieske [2Fe-2S] domain K03886 - - 0.000000000000000000000000004403 118.0
HKD3_k127_289393_4 succinate dehydrogenase K00241,K00247 - - 0.0000000008085 64.0
HKD3_k127_289393_5 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00242 - - 0.0003772 49.0
HKD3_k127_2897485_0 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003967 286.0
HKD3_k127_2897485_1 WD40-like Beta Propeller Repeat K03641 - - 0.0000000000000000000000000000000001305 154.0
HKD3_k127_2897485_2 amine dehydrogenase activity - - - 0.00000000000009485 85.0
HKD3_k127_2897485_3 PFAM secretion protein HlyD family protein - - - 0.000377 53.0
HKD3_k127_3010514_0 Histidine kinase - - - 0.000000000002358 79.0
HKD3_k127_3010514_1 Tetratricopeptide repeat - - - 0.0009272 47.0
HKD3_k127_3063028_0 Responsible for synthesis of pseudouridine from uracil K06180 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000002072 253.0
HKD3_k127_3063028_1 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.00000000000000000000000000000000000000000005548 167.0
HKD3_k127_3063028_2 PFAM extracellular solute-binding protein, family 5 K02035 - - 0.00000000000000000000000000000000002115 154.0
HKD3_k127_3063028_3 Sigma-70 region 2 K03088 - - 0.0000000000000000000000001932 113.0
HKD3_k127_3085960_0 Polyphosphate kinase 2 (PPK2) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 360.0
HKD3_k127_3085960_1 overlaps another CDS with the same product name K07011 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000526 294.0
HKD3_k127_3085960_2 teichoic acid transport K01990,K09689,K09691 - 3.6.3.38 0.0000000000000000000000000000000000000000000000000000000000000005532 225.0
HKD3_k127_3085960_3 PFAM ABC-2 type transporter K01992,K09690 - - 0.0000000000000000000000000000000000000000000000000001113 196.0
HKD3_k127_3085960_4 mitochondrial respiratory chain complex IV assembly K14998 GO:0005575,GO:0005618,GO:0005623,GO:0008150,GO:0030312,GO:0040007,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044403,GO:0044419,GO:0044464,GO:0051704,GO:0071944 - 0.000000000000000000000000000000000001742 148.0
HKD3_k127_317227_0 COGs COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K11618 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006708 287.0
HKD3_k127_317227_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000002129 240.0
HKD3_k127_317227_2 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000005261 201.0
HKD3_k127_317227_3 - - - - 0.000000004104 68.0
HKD3_k127_3185413_0 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002994 326.0
HKD3_k127_338259_0 Immune inhibitor A peptidase M6 - - - 7.241e-203 644.0
HKD3_k127_338259_1 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007145 465.0
HKD3_k127_338259_2 PFAM peptidase S58, DmpA - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002041 417.0
HKD3_k127_338259_3 Electron transfer flavoprotein domain K03522 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002935 279.0
HKD3_k127_338259_4 PFAM Electron transfer flavoprotein alpha beta-subunit K03521 - - 0.0000000000000000000000000000000000000000000000005345 185.0
HKD3_k127_338259_5 YtxH-like protein - - - 0.0000008271 54.0
HKD3_k127_3425502_0 Glycosyl hydrolase 36 superfamily, catalytic domain K00702 - 2.4.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009154 468.0
HKD3_k127_3425502_1 PFAM Alcohol dehydrogenase zinc-binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001516 334.0
HKD3_k127_3425502_2 COGs COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002523 300.0
HKD3_k127_3425502_3 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000009683 228.0
HKD3_k127_3425502_4 WD-40 repeat - - - 0.00000000000000000000000000000000000000000000004459 195.0
HKD3_k127_3425502_5 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000009275 149.0
HKD3_k127_3628196_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01534 - 3.6.3.3,3.6.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003419 628.0
HKD3_k127_3628196_1 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 458.0
HKD3_k127_3628196_2 Rieske (2Fe-2S) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 317.0
HKD3_k127_3628196_3 PFAM Exonuclease, RNase T and DNA polymerase III K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000007755 186.0
HKD3_k127_3628196_4 diguanylate cyclase - - - 0.0000000000000000000000000000000000000006544 165.0
HKD3_k127_3628196_5 acetyltransferase - - - 0.0000000000000000000000000002815 120.0
HKD3_k127_3628196_6 PFAM phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.0000000000000000000000000003708 119.0
HKD3_k127_3628196_7 PspC domain - - - 0.0000000000000005378 79.0
HKD3_k127_3628196_8 DNA polymerase III, epsilon subunit and related 3'-5' K02342 - 2.7.7.7 0.000000000000003614 83.0
HKD3_k127_3629267_0 Cys/Met metabolism PLP-dependent enzyme K01739 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003962,GO:0004123,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006534,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009070,GO:0009086,GO:0009092,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0017144,GO:0019279,GO:0019343,GO:0019344,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071265,GO:0071266,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006973 454.0
HKD3_k127_3629267_1 DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA K05982 - 3.1.21.7 0.000000000000000000000000000000000000000000000003161 181.0
HKD3_k127_3629267_2 Pyridoxal-phosphate dependent enzyme K01697 - 4.2.1.22 0.000000000004557 69.0
HKD3_k127_365597_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1427.0
HKD3_k127_365597_1 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0 1236.0
HKD3_k127_365597_10 Transcriptional regulatory protein, C terminal K07667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003502 296.0
HKD3_k127_365597_11 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001294 269.0
HKD3_k127_365597_12 phosphoglycerate mutase activity K01834 GO:0003674,GO:0003824,GO:0004619,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006109,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009894,GO:0009987,GO:0010675,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0031323,GO:0031329,GO:0032787,GO:0034248,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043455,GO:0043456,GO:0043470,GO:0043471,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046538,GO:0046700,GO:0046939,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051186,GO:0051188,GO:0051193,GO:0051196,GO:0055086,GO:0060255,GO:0062012,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902031 5.4.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000004835 254.0
HKD3_k127_365597_13 Pyruvate ferredoxin/flavodoxin oxidoreductase K00172,K00177 - 1.2.7.1,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000001042 253.0
HKD3_k127_365597_14 Binds the 23S rRNA K02909 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001548 242.0
HKD3_k127_365597_15 Histidine kinase - - - 0.000000000000000000000000000000000000000000000815 180.0
HKD3_k127_365597_16 sequence-specific DNA binding - - - 0.00000000000000000000000000000000000000000001033 170.0
HKD3_k127_365597_17 Protein of unknown function (DUF4230) - - - 0.00000000000000000000000000000000006308 142.0
HKD3_k127_365597_18 Transposase IS200 like - - - 0.00000000000000000000000000000000272 135.0
HKD3_k127_365597_19 Ribosomal L27 protein K02899 - - 0.0000000000000000000000000000008448 123.0
HKD3_k127_365597_2 PFAM ABC transporter related K10112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007979 543.0
HKD3_k127_365597_20 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.000000000000000000000000000004446 122.0
HKD3_k127_365597_21 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000001444 119.0
HKD3_k127_365597_22 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00176 - 1.2.7.3 0.000000000000000000000000001487 113.0
HKD3_k127_365597_23 phosphorelay signal transduction system - - - 0.00000000000000000000001446 105.0
HKD3_k127_365597_24 Protein of unknown function (DUF503) K09764 - - 0.00000000000000000000004305 101.0
HKD3_k127_365597_3 Pyruvate:ferredoxin oxidoreductase core domain II K00174 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004979 535.0
HKD3_k127_365597_4 PFAM Polynucleotide adenylyltransferase region K00970,K00974 - 2.7.7.19,2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001724 412.0
HKD3_k127_365597_5 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002382 394.0
HKD3_k127_365597_6 PhoQ Sensor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003023 361.0
HKD3_k127_365597_7 Enoyl-(Acyl carrier protein) reductase K00059,K00068 - 1.1.1.100,1.1.1.140 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003311 306.0
HKD3_k127_365597_8 PFAM Biotin lipoate A B protein ligase K03800 - 6.3.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003525 305.0
HKD3_k127_365597_9 PFAM thymidine kinase K00857 GO:0003674,GO:0003824,GO:0004797,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006259,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009157,GO:0009162,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019136,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046104,GO:0046125,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:0090407,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001963 297.0
HKD3_k127_3708540_0 ATPases associated with a variety of cellular activities K02056 - 3.6.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001567 613.0
HKD3_k127_3708540_1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K09065 - 2.1.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002744 529.0
HKD3_k127_3708540_2 Amino acid kinase family K00926 - 2.7.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007188 485.0
HKD3_k127_3708540_3 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00609 - 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002032 454.0
HKD3_k127_3708540_4 ABC transporter substrate-binding protein PnrA-like K02058,K07335 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005206 448.0
HKD3_k127_3708540_5 Branched-chain amino acid transport system / permease component K02057 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005671 360.0
HKD3_k127_3708540_6 Branched-chain amino acid transport system / permease component K02057 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006529 274.0
HKD3_k127_3714960_0 aldehyde ferredoxin oxidoreductase activity K03738 - 1.2.7.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 619.0
HKD3_k127_3714960_1 metallophosphoesterase K07096,K07496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006113 283.0
HKD3_k127_3714960_2 - - - - 0.00000000000000000000000000000000000000000000002368 179.0
HKD3_k127_3714960_3 Haem-degrading - - - 0.000000000000000000000000001961 116.0
HKD3_k127_3714960_4 Major Facilitator Superfamily - - - 0.0000000000000000000006886 101.0
HKD3_k127_3714960_5 Amino acid permease - - - 0.00001736 49.0
HKD3_k127_3714960_6 COG1977 Molybdopterin converting factor, small subunit K03636 - - 0.00002064 51.0
HKD3_k127_3751501_0 PFAM major facilitator superfamily MFS_1 - - - 0.000000000000000000000000000000000000000004244 171.0
HKD3_k127_3757205_0 Probable molybdopterin binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000001398 217.0
HKD3_k127_3757205_1 SMART phosphoesterase PHP domain protein - - - 0.00000000000000000000000000000000000000000000000000000005489 204.0
HKD3_k127_3757205_2 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000006518 178.0
HKD3_k127_3757205_3 GCN5 family acetyltransferase K22477 - 2.3.1.1 0.000000000000000000000000000009792 123.0
HKD3_k127_3757205_4 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000759 122.0
HKD3_k127_3757205_5 TadE-like protein - - - 0.00000001712 61.0
HKD3_k127_3757205_6 TadE-like protein - - - 0.00000002241 62.0
HKD3_k127_3757205_7 Putative Flp pilus-assembly TadE/G-like - - - 0.00003064 52.0
HKD3_k127_3757205_8 domain, Protein - - - 0.00008138 53.0
HKD3_k127_3765021_0 glyoxalase III activity - - - 0.0000000000000000000000000000000000000000000000005874 187.0
HKD3_k127_3765021_1 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000000000000000000000000000000000005156 184.0
HKD3_k127_3765021_2 - - - - 0.000000000000000000000000000000000000000000000008872 179.0
HKD3_k127_3765021_3 bifunctional deaminase-reductase domain protein - - - 0.0000000000000000000000000000000000000000000007487 171.0
HKD3_k127_3765021_4 ABC transporter K06158 - - 0.0000000000000000000000000000000000000000000265 168.0
HKD3_k127_3765021_5 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000000000000000000000000183 146.0
HKD3_k127_3778272_0 Belongs to the SEDS family - - - 8.426e-216 699.0
HKD3_k127_3778272_1 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 1.304e-208 668.0
HKD3_k127_3778272_10 membrane - - - 0.00000000000000000000000000000000000000004884 163.0
HKD3_k127_3778272_11 negative regulation of transcription, DNA-templated K10947 - - 0.0000000000000000000000000000001719 126.0
HKD3_k127_3778272_12 Belongs to the Nudix hydrolase family K01515,K03574 - 3.6.1.13,3.6.1.55 0.00000000000000001089 91.0
HKD3_k127_3778272_13 alcohol dehydrogenase - - - 0.00000000000000003675 93.0
HKD3_k127_3778272_14 Peptidase S24 - - - 0.0000002636 57.0
HKD3_k127_3778272_2 PFAM cell divisionFtsK SpoIIIE K03466 - - 5.559e-204 660.0
HKD3_k127_3778272_3 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002807 387.0
HKD3_k127_3778272_4 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004456 271.0
HKD3_k127_3778272_5 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001153 251.0
HKD3_k127_3778272_6 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.00000000000000000000000000000000000000000000000000000000000000000002435 238.0
HKD3_k127_3778272_7 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000002432 209.0
HKD3_k127_3778272_8 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000001143 197.0
HKD3_k127_3778272_9 Nickel-containing superoxide dismutase K00518 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.15.1.1 0.0000000000000000000000000000000000000000000000000002532 189.0
HKD3_k127_3786841_0 Belongs to the ABC transporter superfamily K02031 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000474 400.0
HKD3_k127_3786841_1 Belongs to the ABC transporter superfamily K02032 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005456 393.0
HKD3_k127_3786841_2 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004156 341.0
HKD3_k127_3786841_3 AAA domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004592 325.0
HKD3_k127_3786841_4 Acetylornithine deacetylase K01438 - 3.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001606 282.0
HKD3_k127_3786841_5 zinc-ribbon domain - - - 0.00000000000164 74.0
HKD3_k127_3787993_0 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues K01299 - 3.4.17.19 1.115e-206 652.0
HKD3_k127_3787993_1 domain, Protein - - - 0.00000000000000000000000000000002194 139.0
HKD3_k127_3787993_2 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000001203 118.0
HKD3_k127_3848_0 Zn_pept - - - 6.169e-239 750.0
HKD3_k127_3848_1 protein kinase activity - - - 4.687e-227 738.0
HKD3_k127_3848_10 PFAM Stage II sporulation E family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009805 284.0
HKD3_k127_3848_11 Lipid kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006456 276.0
HKD3_k127_3848_12 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.000000000000000000000000000000000000000000000000000000000000000000001899 243.0
HKD3_k127_3848_13 Belongs to the thioredoxin family K03671 GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 - 0.00000000000000000000000000000000000000000000000000000009139 198.0
HKD3_k127_3848_14 CHAD - - - 0.00000000000000000000000000000000000000000000000000001091 206.0
HKD3_k127_3848_15 aspartic-type endopeptidase activity K02236,K02506,K02654 - 3.4.23.43 0.000000000000000000000000000000000000000000002102 174.0
HKD3_k127_3848_16 Methyltransferase type 11 - - - 0.0000000000000000000000000000001705 132.0
HKD3_k127_3848_17 Redox protein regulator of disulfide bond formation K07397 - - 0.000000000000000000000000000005322 124.0
HKD3_k127_3848_18 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis - - - 0.0000000000000000000000000002434 118.0
HKD3_k127_3848_19 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.000000000000000000001274 94.0
HKD3_k127_3848_2 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 5.127e-206 647.0
HKD3_k127_3848_20 Pfam Wyosine base formation - - - 0.0004454 49.0
HKD3_k127_3848_3 ATPase associated with various cellular activities, AAA_3 K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005165 465.0
HKD3_k127_3848_4 extracellular polysaccharide biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007241 452.0
HKD3_k127_3848_5 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009109 441.0
HKD3_k127_3848_6 PFAM TrkA-N domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 350.0
HKD3_k127_3848_7 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 333.0
HKD3_k127_3848_8 Protein of unknown function DUF58 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009951 325.0
HKD3_k127_3848_9 Metallo-beta-lactamase superfamily K17837 - 3.5.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009034 287.0
HKD3_k127_3894824_0 Belongs to the ABC transporter superfamily K10823 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 447.0
HKD3_k127_3894824_1 Belongs to the ABC transporter superfamily K02031,K15583 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009983 433.0
HKD3_k127_3894824_2 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 382.0
HKD3_k127_3894824_3 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002713 293.0
HKD3_k127_3894824_4 PFAM extracellular solute-binding protein, family 5 K02035 - - 0.000000000000000000000000000000000000000000000000001523 206.0
HKD3_k127_3894824_5 PFAM extracellular solute-binding protein, family 5 K02035 - - 0.000000000000000000000000000000000000000000000001733 196.0
HKD3_k127_3894824_6 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.0000000000000582 77.0
HKD3_k127_3894824_7 Methylase involved in ubiquinone menaquinone biosynthesis - - - 0.000000049 59.0
HKD3_k127_3946903_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 3.602e-297 934.0
HKD3_k127_3946903_1 PFAM Dak phosphatase K07030 - - 3.735e-213 676.0
HKD3_k127_3946903_10 PFAM regulatory protein TetR - - - 0.00000000000000000000000000000000000000000000000000825 186.0
HKD3_k127_3946903_11 Domain of unknown function (DUF348) - - - 0.0000000000000000000000000000000000000000000481 171.0
HKD3_k127_3946903_12 Uncharacterised protein, DegV family COG1307 - - - 0.000000000000000000000000000000000000000001536 166.0
HKD3_k127_3946903_13 Asp23 family, cell envelope-related function - - - 0.000000000000000000000000000000000000003404 149.0
HKD3_k127_3946903_14 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.00000000000000000000000000000002864 136.0
HKD3_k127_3946903_15 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.000000000000000000003973 95.0
HKD3_k127_3946903_16 PFAM glycoside hydrolase family 10 - - - 0.0000000000000000002638 94.0
HKD3_k127_3946903_17 ribosomal protein L28 K02902 - - 0.00000000000000004315 81.0
HKD3_k127_3946903_18 EDD domain protein, DegV family - - - 0.0000000000003364 80.0
HKD3_k127_3946903_2 COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL CutL homologs K07303 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 628.0
HKD3_k127_3946903_3 PFAM acyl-CoA dehydrogenase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006835 526.0
HKD3_k127_3946903_4 Pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002557 511.0
HKD3_k127_3946903_5 NB-ARC domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000427 453.0
HKD3_k127_3946903_6 NAD-dependent epimerase dehydratase K00091 - 1.1.1.219 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007832 368.0
HKD3_k127_3946903_7 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000007266 249.0
HKD3_k127_3946903_8 [2Fe-2S] binding domain K07302,K18029 - 1.17.2.1,1.3.99.16 0.00000000000000000000000000000000000000000000000000000264 196.0
HKD3_k127_3946903_9 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) - - - 0.00000000000000000000000000000000000000000000000000000464 194.0
HKD3_k127_3967103_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 1.79e-239 744.0
HKD3_k127_3967103_1 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008065 550.0
HKD3_k127_3967103_10 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0005583 51.0
HKD3_k127_3967103_2 GHMP kinases N terminal domain K01597 - 4.1.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005256 363.0
HKD3_k127_3967103_3 Belongs to the UPF0758 family K03630 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002217 294.0
HKD3_k127_3967103_4 SMART PDZ DHR GLGF domain protein K11749 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 298.0
HKD3_k127_3967103_5 PBS lyase HEAT domain protein repeat-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007684 286.0
HKD3_k127_3967103_6 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.0000000000000000000000000000000000000000000000000000000007733 202.0
HKD3_k127_3967103_7 exodeoxyribonuclease I activity - - - 0.0000000000000000000000000000000000000000000000000000001572 200.0
HKD3_k127_3967103_8 PFAM Auxin Efflux Carrier K07088 - - 0.000000000000000000000000000000000000000007346 165.0
HKD3_k127_3967103_9 Belongs to the acylphosphatase family K01512 - 3.6.1.7 0.0000000000000000000001463 100.0
HKD3_k127_3977251_0 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 1.201e-275 858.0
HKD3_k127_3977251_1 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009722 457.0
HKD3_k127_3977251_10 serine acetyltransferase K00640 - 2.3.1.30 0.000000000000000000000000000000000000000001315 160.0
HKD3_k127_3977251_11 4Fe-4S dicluster domain K00125,K03646 - 1.17.1.9 0.000000000000000000000000000000000000002672 160.0
HKD3_k127_3977251_12 Rieske 2Fe-2S - - - 0.000000000000000000001964 100.0
HKD3_k127_3977251_13 Mut7-C ubiquitin - - - 0.00000000000000002355 84.0
HKD3_k127_3977251_14 EamA-like transporter family - - - 0.00000000000002328 78.0
HKD3_k127_3977251_15 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 0.0000000001216 64.0
HKD3_k127_3977251_2 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02472 - 1.1.1.336 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001784 426.0
HKD3_k127_3977251_3 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007113 397.0
HKD3_k127_3977251_4 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000251 300.0
HKD3_k127_3977251_5 transferase activity, transferring glycosyl groups K21011,K21012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 293.0
HKD3_k127_3977251_6 Bacterial sugar transferase K13012 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003164 279.0
HKD3_k127_3977251_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009638 273.0
HKD3_k127_3977251_8 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.0000000000000000000000000000000000000000000000000000000000009678 218.0
HKD3_k127_3977251_9 Mo-molybdopterin cofactor metabolic process K03636 - - 0.0000000000000000000000000000000000000000003263 162.0
HKD3_k127_3992896_0 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 2.484e-229 728.0
HKD3_k127_3992896_1 ErfK ybiS ycfS ynhG family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 332.0
HKD3_k127_3992896_2 Dehydrogenase E1 component K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000009706 265.0
HKD3_k127_3992896_3 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002101 268.0
HKD3_k127_3992896_4 PFAM PDZ DHR GLGF domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001113 268.0
HKD3_k127_3992896_5 PFAM Roadblock LC7 family protein K07131 - - 0.0000000000000000000000000000000000000000000199 164.0
HKD3_k127_4008377_0 PFAM Alcohol dehydrogenase zinc-binding domain protein - - - 3.242e-228 719.0
HKD3_k127_4008377_1 Cysteine export CydDC family ABC transporter permease subunit ATP-binding protein CydC K16012 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007847 484.0
HKD3_k127_4008377_2 peptidase M29 aminopeptidase II K19689 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005413 433.0
HKD3_k127_4008377_3 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007453 261.0
HKD3_k127_4010278_0 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301 625.0
HKD3_k127_4010278_1 Sigma factor PP2C-like phosphatases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000505 327.0
HKD3_k127_4010278_2 serine-type peptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001092 285.0
HKD3_k127_4010278_3 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000003396 143.0
HKD3_k127_4011591_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 3.395e-304 954.0
HKD3_k127_4011591_1 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000571 515.0
HKD3_k127_4011591_2 Transporter associated domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004636 458.0
HKD3_k127_4011591_3 Belongs to the MEMO1 family K06990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 319.0
HKD3_k127_4011591_4 Phosphoribosyl transferase domain K07101 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001776 244.0
HKD3_k127_4011591_5 nUDIX hydrolase - - - 0.000000000000000000000000000000000000000000004354 168.0
HKD3_k127_4011591_6 GrpB protein - - - 0.000000000000000000000000000000000000006955 152.0
HKD3_k127_4011591_7 Rdx family K07401 - - 0.000000000000005486 76.0
HKD3_k127_4011591_8 - - - - 0.000273 52.0
HKD3_k127_4025610_0 PFAM Exonuclease, RNase T and DNA polymerase III K02342,K03722 - 2.7.7.7,3.6.4.12 0.0 1108.0
HKD3_k127_4025610_1 SMART AAA ATPase K03405 - 6.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002299 468.0
HKD3_k127_4025610_2 PFAM Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003428 426.0
HKD3_k127_4025610_3 ATPase associated with various cellular activities, AAA_3 K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003861 416.0
HKD3_k127_4025610_4 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004341 373.0
HKD3_k127_4025610_5 Methyltransferase K08316 - 2.1.1.171 0.00000000000000000000000000000000000000000000000000000000000000001283 229.0
HKD3_k127_4025610_6 Tetratricopeptide repeat - - - 0.000005806 53.0
HKD3_k127_406051_0 sigma-70 region 2 domain protein K03088 - - 0.0000000000000000000000000000000000000000009414 164.0
HKD3_k127_406051_1 PFAM WD domain, G-beta repeat - - - 0.000000000000000000000000006753 123.0
HKD3_k127_4111608_0 TIGRFAM DNA polymerase III, alpha subunit K02337 - 2.7.7.7 0.0 1525.0
HKD3_k127_4111608_1 Glycosyl hydrolase 36 superfamily, catalytic domain - - - 0.0 1311.0
HKD3_k127_4111608_10 Binding-protein-dependent transport system inner membrane component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001972 442.0
HKD3_k127_4111608_11 Binding-protein-dependent transport system inner membrane component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005055 401.0
HKD3_k127_4111608_12 helix_turn _helix lactose operon repressor K02529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006581 385.0
HKD3_k127_4111608_13 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007016 357.0
HKD3_k127_4111608_14 Binding-protein-dependent transport system inner membrane component - - - 0.0000000000000000000000000000000000000000000000000000000000000000111 235.0
HKD3_k127_4111608_15 COG3209 Rhs family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000005978 235.0
HKD3_k127_4111608_16 Phage integrase family - - - 0.00000000000000000000000000000000000000003725 160.0
HKD3_k127_4111608_17 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.000000000000000000000000000002591 120.0
HKD3_k127_4111608_18 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.000000000000001011 79.0
HKD3_k127_4111608_19 PFAM transposase mutator type - - - 0.000000000000001567 81.0
HKD3_k127_4111608_2 Bacterial extracellular solute-binding protein - - - 0.0 1265.0
HKD3_k127_4111608_20 Involved in the tonB-independent uptake of proteins K12132,K20276 - 2.7.11.1 0.000000005001 68.0
HKD3_k127_4111608_3 amine dehydrogenase activity - - - 1.195e-284 889.0
HKD3_k127_4111608_4 alginic acid biosynthetic process - - - 1.148e-264 834.0
HKD3_k127_4111608_5 PFAM glycoside hydrolase family 35 K12308 - 3.2.1.23 4.159e-222 698.0
HKD3_k127_4111608_6 Putative glucoamylase - - - 2.505e-200 634.0
HKD3_k127_4111608_7 Bacterial extracellular solute-binding protein - - - 4.251e-195 620.0
HKD3_k127_4111608_8 Putative glucoamylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004328 559.0
HKD3_k127_4111608_9 Binding-protein-dependent transport system inner membrane component K02025 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000743 496.0
HKD3_k127_4124538_0 Selenocysteine-specific translation elongation factor K03833 - - 1.709e-244 770.0
HKD3_k127_4124538_1 peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 338.0
HKD3_k127_4124538_2 Proton-conducting membrane transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008136 330.0
HKD3_k127_4124538_3 Amidohydrolase family K01464,K01466 - 3.5.2.2,3.5.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000002016 255.0
HKD3_k127_4124538_4 PFAM sigma-70 region 2 domain protein K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000007941 226.0
HKD3_k127_4124538_5 CoA binding domain K09181 - - 0.0000000000000000000000000000000000000000000000000000000000431 209.0
HKD3_k127_4124538_8 Putative zinc-finger - - - 0.00000000000000000035 90.0
HKD3_k127_4131981_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1184.0
HKD3_k127_4131981_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 9.189e-314 970.0
HKD3_k127_4131981_10 Dehydrogenase E1 component K21416 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007574 285.0
HKD3_k127_4131981_11 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009809 264.0
HKD3_k127_4131981_12 Redoxin K11065 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000001898 215.0
HKD3_k127_4131981_13 PFAM RNA binding S1 domain protein - - - 0.000000000000000000000000000000000000000000000000000000000009671 217.0
HKD3_k127_4131981_14 spore germination K03298 - - 0.00000000000000000000000000000000000000000000000000000000009201 213.0
HKD3_k127_4131981_15 - - - - 0.00000000000000000000000000000000000000002587 156.0
HKD3_k127_4131981_16 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000000002332 154.0
HKD3_k127_4131981_17 Uncharacterized ACR, COG1430 K09005 - - 0.00000000000000000000000000000000009055 137.0
HKD3_k127_4131981_19 Belongs to the small heat shock protein (HSP20) family - - - 0.0000000000000000000000000006685 119.0
HKD3_k127_4131981_2 FAD linked oxidases, C-terminal domain K00803 - 2.5.1.26 1.147e-198 632.0
HKD3_k127_4131981_20 response regulator K03413,K07719 - - 0.000000000000000000000001192 107.0
HKD3_k127_4131981_3 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00111 - 1.1.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001831 619.0
HKD3_k127_4131981_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006079 540.0
HKD3_k127_4131981_5 Beta-ketoacyl synthase, C-terminal domain K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001545 503.0
HKD3_k127_4131981_6 SMART phosphoesterase PHP domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006472 444.0
HKD3_k127_4131981_7 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009181 392.0
HKD3_k127_4131981_8 Lysin motif - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 385.0
HKD3_k127_4131981_9 DinB superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004028 372.0
HKD3_k127_4148750_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 6.558e-320 991.0
HKD3_k127_4148750_1 Belongs to the GPI family K01810,K13810 - 2.2.1.2,5.3.1.9 1.644e-270 854.0
HKD3_k127_4148750_10 PFAM methyl-viologen-reducing hydrogenase delta subunit K14127 - 1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000006651 193.0
HKD3_k127_4148750_11 Belongs to the GPI family K01810,K13810 - 2.2.1.2,5.3.1.9 0.0000000000000000000000000000000000000009613 151.0
HKD3_k127_4148750_12 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000004916 151.0
HKD3_k127_4148750_13 4Fe-4S dicluster domain K03389,K03390,K16887,K18930 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000203 139.0
HKD3_k127_4148750_15 spore germination K03605 - - 0.00000000000000000000000001944 115.0
HKD3_k127_4148750_16 Belongs to the UPF0102 family K07460 - - 0.00000000000000000000000002772 112.0
HKD3_k127_4148750_17 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000006033 101.0
HKD3_k127_4148750_2 Heterodisulfide reductase subunit A and related polyferredoxins K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 2.364e-253 797.0
HKD3_k127_4148750_3 PFAM AMP-dependent synthetase K01897 - 6.2.1.3 2.772e-233 734.0
HKD3_k127_4148750_4 Nickel-dependent hydrogenase K14126 - 1.8.98.5 6.309e-225 707.0
HKD3_k127_4148750_5 NADH ubiquinone oxidoreductase, 20 Kd subunit K14128 - 1.8.98.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008003 387.0
HKD3_k127_4148750_6 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 337.0
HKD3_k127_4148750_7 Heterodisulfide reductase subunit B K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002118 284.0
HKD3_k127_4148750_8 glycosyl transferase group 1 K08256 - 2.4.1.345 0.00000000000000000000000000000000000000000000000000000000000000000000000000002876 273.0
HKD3_k127_4148750_9 Ribose/Galactose Isomerase K01808 - 5.3.1.6 0.00000000000000000000000000000000000000000000000000000005351 199.0
HKD3_k127_4194405_0 Belongs to the 'phage' integrase family K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001526 397.0
HKD3_k127_4194405_1 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K00760,K04075,K15780 - 2.4.2.8,6.3.4.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002548 332.0
HKD3_k127_4194405_2 AAA domain K02282 - - 0.00000000000000000000000000000000000002953 144.0
HKD3_k127_4194405_3 TIGRFAM metal dependent phophohydrolase - - - 0.00000000000000000007601 89.0
HKD3_k127_427174_0 thiamine transport K02063 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006855,GO:0008150,GO:0015234,GO:0015238,GO:0015893,GO:0016020,GO:0022857,GO:0035461,GO:0042221,GO:0042493,GO:0044464,GO:0045117,GO:0050896,GO:0051179,GO:0051180,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071934,GO:0071944,GO:0072348,GO:0072531,GO:0090482,GO:1901474,GO:1901682 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005701 539.0
HKD3_k127_427174_1 Bacterial extracellular solute-binding protein K02064 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002649 379.0
HKD3_k127_427174_2 Domain of unknown function (DUF4388) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 325.0
HKD3_k127_427174_3 TIGRFAM small GTP-binding protein K06945 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003884 302.0
HKD3_k127_427174_4 TOBE domain K02062,K11072 - 3.6.3.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009401 290.0
HKD3_k127_427174_5 PFAM Thiamin pyrophosphokinase, catalytic region K00949 - 2.7.6.2 0.0000000000000000000000000000000000000000000000126 179.0
HKD3_k127_427174_6 Flavin reductase like domain - - - 0.000000000000000000000000000004017 124.0
HKD3_k127_427174_7 cheY-homologous receiver domain - - - 0.0001531 49.0
HKD3_k127_4366498_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003375 429.0
HKD3_k127_4366498_1 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 383.0
HKD3_k127_4366498_2 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.00000000000000000000000000000000000005144 149.0
HKD3_k127_4366498_3 domain, Protein - - - 0.00000000000000000000001687 106.0
HKD3_k127_4414684_0 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 7.069e-208 654.0
HKD3_k127_4414684_1 Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 3.105e-195 621.0
HKD3_k127_4414684_2 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003399 608.0
HKD3_k127_4414684_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 460.0
HKD3_k127_4414684_4 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02109 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000705 273.0
HKD3_k127_4414684_5 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000000000000000000000000000000000000000000000000000006551 212.0
HKD3_k127_4414684_6 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000006666 204.0
HKD3_k127_4414684_7 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000000007432 77.0
HKD3_k127_4416455_0 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 1.418e-205 651.0
HKD3_k127_4416455_1 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH K00033 - 1.1.1.343,1.1.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003002 542.0
HKD3_k127_4416455_10 Aminoglycoside-2''-adenylyltransferase K19545 - - 0.00000000000000000000000000001227 125.0
HKD3_k127_4416455_11 transcriptional regulator - - - 0.000000000000000000000000001981 119.0
HKD3_k127_4416455_12 PFAM purine or other phosphorylase family 1 K01243 - 3.2.2.9 0.000000000000000000000004775 111.0
HKD3_k127_4416455_13 Phosphotransferase - - - 0.00000000000000000008913 100.0
HKD3_k127_4416455_14 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0000001768 64.0
HKD3_k127_4416455_15 Protein of unknown function (DUF1059) - - - 0.00002568 49.0
HKD3_k127_4416455_2 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002165 452.0
HKD3_k127_4416455_3 Thioredoxin reductase K07222 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007267 331.0
HKD3_k127_4416455_4 Haloacid dehalogenase-like hydrolase K07025 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002882 263.0
HKD3_k127_4416455_5 Kelch motif - - - 0.00000000000000000000000000000000000000000000000000000000000001846 231.0
HKD3_k127_4416455_6 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.000000000000000000000000000000000000000000000000000000000491 207.0
HKD3_k127_4416455_7 Protein of unknown function, DUF488 - - - 0.00000000000000000000000000000000000000000002709 163.0
HKD3_k127_4416455_8 Domain of unknown function (DU1801) - - - 0.00000000000000000000000000000000000002004 150.0
HKD3_k127_4416455_9 Protein of unknown function (DUF1706) - - - 0.0000000000000000000000000000000004714 138.0
HKD3_k127_4434411_0 Glycosyl hydrolase family 3 C-terminal domain K05349 - 3.2.1.21 7.484e-201 648.0
HKD3_k127_4434411_1 Family 4 glycosyl hydrolase K01222 - 3.2.1.86 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004298 516.0
HKD3_k127_4434411_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003061 373.0
HKD3_k127_4434411_3 myo-inosose-2 dehydratase activity K10709 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001731 302.0
HKD3_k127_4434411_4 pfkB family carbohydrate kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001366 248.0
HKD3_k127_4434411_5 Shikimate kinase K00851 - 2.7.1.12 0.000000000000000000000000000000000000000000000004247 177.0
HKD3_k127_4434411_6 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway K00852,K00856,K10710,K22026 - 2.7.1.15,2.7.1.20,2.7.1.213,2.7.1.218,2.7.1.73 0.00000000000000000000000000000000000000000002291 173.0
HKD3_k127_446146_0 Acetyl-CoA hydrolase/transferase N-terminal domain - - - 2.732e-206 648.0
HKD3_k127_446146_1 Alanine dehydrogenase/PNT, N-terminal domain K00259 - 1.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001615 301.0
HKD3_k127_446146_2 serine-type endopeptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003201 293.0
HKD3_k127_446146_3 NHL repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000001467 241.0
HKD3_k127_446146_4 Cytidine and deoxycytidylate deaminase zinc-binding region - - - 0.00000000000000000000000000002571 119.0
HKD3_k127_446146_5 - - - - 0.000000000000000000000000008927 127.0
HKD3_k127_446146_7 - - - - 0.00000000000000000768 89.0
HKD3_k127_446146_8 Rhs_assc_core RHS repeat-associated core domain protein - - - 0.00000000000000002246 96.0
HKD3_k127_4498672_0 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016740,GO:0016782,GO:0016783,GO:0016992,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0070283,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004341 534.0
HKD3_k127_4498672_1 Saccharopine dehydrogenase NADP binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002143 281.0
HKD3_k127_4498672_2 phosphatidate phosphatase activity K01096,K19302 - 3.1.3.27,3.1.3.4,3.1.3.81,3.6.1.27 0.000000000000000000000000000000000000000003459 160.0
HKD3_k127_4498672_3 PFAM Isoprenylcysteine carboxyl methyltransferase - - - 0.00000000000000000000000000000000000002933 152.0
HKD3_k127_4498672_4 molybdenum cofactor guanylyltransferase activity K03752,K13818 GO:0003674,GO:0003824,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.77 0.00000000000000000000000000000002434 130.0
HKD3_k127_4498672_5 PFAM Prenyltransferase squalene oxidase K06045 - 4.2.1.129,5.4.99.17 0.0000000000004361 79.0
HKD3_k127_4795646_0 Lysine-2,3-aminomutase K01843 - 5.4.3.2 6.85e-232 723.0
HKD3_k127_4795646_1 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002113 483.0
HKD3_k127_4795646_2 PFAM UBA THIF-type NAD FAD binding protein K21029,K21147 - 2.7.7.80,2.8.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004787 356.0
HKD3_k127_4795646_3 TIGRFAM serine O-acetyltransferase K00640 - 2.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007922 297.0
HKD3_k127_4795646_4 transferase activity, transferring glycosyl groups - - - 0.000006539 57.0
HKD3_k127_4819626_0 extracellular solute-binding protein, family 3 K09969 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006223 353.0
HKD3_k127_4819626_1 COG4597 ABC-type amino acid transport system, permease component K09970 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000003666 232.0
HKD3_k127_4819626_2 finger protein K16276 - - 0.0000000000000001861 87.0
HKD3_k127_484251_0 N-Acyl-D-aspartate D-glutamate deacylase K06015 - 3.5.1.81 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005287 420.0
HKD3_k127_484251_1 PFAM adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004053 389.0
HKD3_k127_484251_10 homoserine kinase type II (protein kinase fold) - - - 0.000000000000000000000000000000000000000000000221 180.0
HKD3_k127_484251_11 Butirosin biosynthesis protein H, N-terminal - - - 0.0000000000000000000000000000000000000005545 161.0
HKD3_k127_484251_12 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000001076 163.0
HKD3_k127_484251_13 methyltransferase activity - - - 0.00000000000000000000000000000000000005273 148.0
HKD3_k127_484251_14 Hemerythrin HHE cation binding - - - 0.00000000000000000000000000000000000852 144.0
HKD3_k127_484251_15 PFAM Acetoacetate decarboxylase (ADC) - - - 0.000000000000000000000000000008559 130.0
HKD3_k127_484251_16 AAA ATPase domain - - - 0.000000000000002534 91.0
HKD3_k127_484251_17 - - - - 0.000000000000004491 84.0
HKD3_k127_484251_18 Phosphate acyltransferases K00655 - 2.3.1.51 0.00000000000001544 83.0
HKD3_k127_484251_19 ABC-type multidrug transport system, permease component K01992 - - 0.00000000000006953 84.0
HKD3_k127_484251_2 Dienelactone hydrolase family K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003397 341.0
HKD3_k127_484251_21 - - - - 0.0000000002266 64.0
HKD3_k127_484251_3 PFAM ABC transporter related K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006158 336.0
HKD3_k127_484251_4 Linear amide C-N hydrolases, choloylglycine hydrolase family K01442 - 3.5.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002051 277.0
HKD3_k127_484251_5 Chloramphenicol acetyltransferase K19271 - 2.3.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000003568 246.0
HKD3_k127_484251_6 virulence factor implicated in the pathogenesis of mycobacterium tuberculosis at the level of intracellular survival, by the alteration of cell signaling events or by direct cytotoxicity catalytic activity a phosphatidylcholine H(2)O 1,2- diacylglycerol choline phosphate K01114 GO:0003674,GO:0003824,GO:0004620,GO:0004629,GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0006629,GO:0008081,GO:0008150,GO:0008152,GO:0009056,GO:0009405,GO:0016020,GO:0016042,GO:0016298,GO:0016787,GO:0016788,GO:0034480,GO:0035821,GO:0042578,GO:0044003,GO:0044238,GO:0044403,GO:0044419,GO:0044464,GO:0051701,GO:0051704,GO:0051817,GO:0052008,GO:0052043,GO:0052111,GO:0052185,GO:0052188,GO:0052368,GO:0071704,GO:0071944,GO:1901575 3.1.4.3 0.000000000000000000000000000000000000000000000000000000000000000001985 241.0
HKD3_k127_484251_7 Domain of unknown function (DUF4287) - - - 0.00000000000000000000000000000000000000000000000005526 184.0
HKD3_k127_484251_8 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.0000000000000000000000000000000000000000000000001539 183.0
HKD3_k127_484251_9 COGs COG2208 Serine phosphatase RsbU regulator of sigma subunit K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000002242 195.0
HKD3_k127_4843671_0 Photosynthesis system II assembly factor YCF48 - - - 0.000000000000000000000007672 114.0
HKD3_k127_4843671_1 Staphylococcal nuclease homologues K01174 - 3.1.31.1 0.0000000000000000000002103 110.0
HKD3_k127_4859970_0 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002525 498.0
HKD3_k127_4859970_1 PFAM glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005604 367.0
HKD3_k127_4859970_2 polysaccharide biosynthetic process K16694 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002011 300.0
HKD3_k127_4859970_3 lysyltransferase activity K07027 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001979 281.0
HKD3_k127_4859970_5 - - - - 0.00000000000000000000000000000000000000000000000000000000806 216.0
HKD3_k127_4860055_0 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001303 361.0
HKD3_k127_4860055_1 Transmembrane secretion effector - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 351.0
HKD3_k127_4860055_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002546 332.0
HKD3_k127_4860055_3 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.000000000000000000000000000000000000000000001577 166.0
HKD3_k127_4861479_0 denitrification pathway K15876 GO:0003674,GO:0003824,GO:0005575,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0022900,GO:0031224,GO:0044237,GO:0044425,GO:0045333,GO:0055114 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003405 584.0
HKD3_k127_4861479_1 formate dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005382 374.0
HKD3_k127_4861479_10 formate dehydrogenase - - - 0.00000000000000000000000000000000000000000001427 171.0
HKD3_k127_4861479_11 histidine kinase, dimerisation and phosphoacceptor region - - - 0.00000000000000000000000000000000000002007 162.0
HKD3_k127_4861479_12 Rieske [2Fe-2S] domain K03886 - - 0.000000000000000000000000000001705 126.0
HKD3_k127_4861479_13 Cytochrome b(C-terminal)/b6/petD K00412 - - 0.00000000000000000000000004095 125.0
HKD3_k127_4861479_14 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.0000000001544 72.0
HKD3_k127_4861479_15 C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex K00406 - - 0.0000000001629 74.0
HKD3_k127_4861479_16 Cytochrome c - - - 0.00000001372 68.0
HKD3_k127_4861479_17 Glucose sorbosone dehydrogenase K21430 - - 0.0000003809 63.0
HKD3_k127_4861479_2 denitrification pathway - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005598 377.0
HKD3_k127_4861479_3 domain, Protein K01219,K17624 - 3.2.1.81,3.2.1.97 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 346.0
HKD3_k127_4861479_4 denitrification pathway - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005298 298.0
HKD3_k127_4861479_5 Cytochrome b/b6/petB K00412,K03888 - - 0.0000000000000000000000000000000000000000000000000000000000000000000137 239.0
HKD3_k127_4861479_6 PFAM Polysulphide reductase, NrfD K00185 - - 0.0000000000000000000000000000000000000000000000000000000000000000004509 244.0
HKD3_k127_4861479_7 Response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000004717 223.0
HKD3_k127_4861479_8 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K03385 - 1.7.2.2 0.00000000000000000000000000000000000000000000000000000000000001676 228.0
HKD3_k127_4861479_9 4Fe-4S dicluster domain K00184 - - 0.000000000000000000000000000000000000000000000000000006298 200.0
HKD3_k127_4867241_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001844 616.0
HKD3_k127_4867241_1 WD-40 repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003283 474.0
HKD3_k127_4868685_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 9.713e-285 912.0
HKD3_k127_4868685_1 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 3.532e-244 762.0
HKD3_k127_4868685_2 Transketolase, pyrimidine binding domain K00162,K21417 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005551 290.0
HKD3_k127_4868685_3 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.00000000000000000000000000000000000000000000000000000000000000003159 228.0
HKD3_k127_4868685_4 Bacterial transferase hexapeptide (six repeats) - - - 0.00000000000000000000000000000000000000000000000000000000000001991 228.0
HKD3_k127_4868685_5 PFAM Roadblock LC7 family protein K07131 - - 0.0000000000000000000000000000000000000000000000592 171.0
HKD3_k127_4873509_0 Cation transporter/ATPase, N-terminus K01531 - 3.6.3.2 0.0 1198.0
HKD3_k127_4873509_1 Leucine carboxyl methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000349 290.0
HKD3_k127_4873509_2 4Fe-4S dicluster domain K00196 - - 0.000000000000000000000000000000000000000000000000000000000000102 220.0
HKD3_k127_4873509_3 TIGRFAM Carbon-monoxide dehydrogenase, catalytic subunit K00198 - 1.2.7.4 0.0000000000000000000000000000000000000000000000000002117 187.0
HKD3_k127_4874981_0 acyl-CoA dehydrogenase - - - 6.501e-267 831.0
HKD3_k127_4874981_1 PFAM phospholipid glycerol acyltransferase - - - 0.00000000000000000000000000000000006158 143.0
HKD3_k127_4874981_2 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.00000000000000000002665 98.0
HKD3_k127_4875952_0 Amino acid permease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003474 556.0
HKD3_k127_4875952_1 PFAM acyl-CoA dehydrogenase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 432.0
HKD3_k127_4875952_3 D-aminopeptidase K16203 - - 0.0000000000000000000000000000000000000000000000000000000000003665 220.0
HKD3_k127_4875952_4 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0002790,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006457,GO:0006605,GO:0006810,GO:0006886,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032940,GO:0032991,GO:0033036,GO:0033220,GO:0034613,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042802,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0046903,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061077,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.00000004045 55.0
HKD3_k127_4875952_5 CytoplasmicMembrane, score 9.99 - - - 0.0001806 56.0
HKD3_k127_4879156_0 PFAM AAA ATPase central domain protein K07478 - - 4.01e-207 653.0
HKD3_k127_4879156_1 Belongs to the glycosyl hydrolase 5 (cellulase A) family K01179,K13276 - 3.2.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003348 494.0
HKD3_k127_4879156_2 PFAM Phosphoglycerate mutase - - - 0.00000234 50.0
HKD3_k127_4904665_0 ABC transporter transmembrane region K06147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000148 367.0
HKD3_k127_4904665_1 TIGRFAM RarD protein, DMT superfamily transporter K05786 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004026 323.0
HKD3_k127_4904665_2 Peptidase family M28 - - - 0.000000000000000000000000000000000000000002894 166.0
HKD3_k127_4904665_3 nucleoside 2-deoxyribosyltransferase - GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009123,GO:0009125,GO:0009159,GO:0009162,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0070694,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 - 0.0000000000000000000000000000004859 126.0
HKD3_k127_4947434_0 PFAM glycosyl transferase, family 35 K00688 - 2.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 576.0
HKD3_k127_4947434_1 Fe-S oxidoreductase K18928 - - 0.000000000000000000000000000000854 125.0
HKD3_k127_4961948_0 PFAM extracellular solute-binding protein, family 5 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002654 402.0
HKD3_k127_4961948_1 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002993 329.0
HKD3_k127_4975812_0 Aldo/keto reductase family K19265 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001634 520.0
HKD3_k127_4975812_1 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000004183 126.0
HKD3_k127_4991537_0 SMART protein phosphatase 2C domain protein K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000001511 211.0
HKD3_k127_4991537_1 Belongs to the glycosyl hydrolase 13 family K01187 - 3.2.1.20 0.00000000000000000000000000000000000000000000000000003898 192.0
HKD3_k127_4991537_2 PFAM Sulfate transporter antisigma-factor antagonist STAS K04749,K04757 - 2.7.11.1 0.000000000000000000000006197 108.0
HKD3_k127_4991537_3 PFAM Sulfate transporter antisigma-factor antagonist STAS K04749 - - 0.00000000000000000000121 98.0
HKD3_k127_4992295_0 Terminase-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009717 451.0
HKD3_k127_4992295_1 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000204 240.0
HKD3_k127_4992295_10 Carboxymuconolactone decarboxylase family - - - 0.00000000000000007291 82.0
HKD3_k127_4992295_11 Protein of unknown function (DUF1572) - - - 0.00000000000003183 79.0
HKD3_k127_4992295_12 - - - - 0.0000000243 59.0
HKD3_k127_4992295_13 - - - - 0.00004861 51.0
HKD3_k127_4992295_2 Transglutaminase-like superfamily - - - 0.0000000000000000000000000000000000000000000000007751 183.0
HKD3_k127_4992295_3 Streptomycin adenylyltransferase K05593 - - 0.00000000000000000000000000000000000000000001008 173.0
HKD3_k127_4992295_4 - - - - 0.0000000000000000000000000000000000000000003078 164.0
HKD3_k127_4992295_5 Aminoglycoside 3-N-acetyltransferase - - - 0.0000000000000000000000000000000004234 141.0
HKD3_k127_4992295_6 Carboxymuconolactone decarboxylase family - - - 0.000000000000000000000000001509 115.0
HKD3_k127_4992295_7 Glycosyl hydrolases family 25 K07273 - - 0.0000000000000000000000587 108.0
HKD3_k127_4992295_8 Golgi phosphoprotein 3 (GPP34) - - - 0.000000000000000000009408 100.0
HKD3_k127_4992295_9 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000001139 87.0
HKD3_k127_4997634_0 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 487.0
HKD3_k127_4997634_1 PFAM natural resistance-associated macrophage protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005302 476.0
HKD3_k127_4997634_10 Mediates influx of magnesium ions K03284 - - 0.0000000000000001313 81.0
HKD3_k127_4997634_2 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004421 419.0
HKD3_k127_4997634_3 MgtE intracellular N domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004322 340.0
HKD3_k127_4997634_4 DinB family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004059 252.0
HKD3_k127_4997634_5 Integral membrane protein DUF92 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001719 259.0
HKD3_k127_4997634_6 Phosphoribosyl transferase domain K07101 - - 0.0000000000000000000000000000000000000000000000000000000000299 210.0
HKD3_k127_4997634_7 Aminoacyl-tRNA editing domain - - - 0.0000000000000000000000000000000000000000000000000000000004308 205.0
HKD3_k127_4997634_8 Protein of unknown function (DUF541) K09807 - - 0.00000000000000000000000000000000000000000000000002962 188.0
HKD3_k127_4998389_0 nuclear chromosome segregation - - - 6.296e-270 856.0
HKD3_k127_4998389_1 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009942 399.0
HKD3_k127_4998389_10 Tfp pilus assembly protein FimV - - - 0.0002452 53.0
HKD3_k127_4998389_2 PFAM phospholipase D Transphosphatidylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008554 261.0
HKD3_k127_4998389_3 - - - - 0.0000000000000000000000000000000000000000000000000000000001632 211.0
HKD3_k127_4998389_4 Transcriptional regulator K03724 - - 0.000000000000000000000000000000000000000000001114 171.0
HKD3_k127_4998389_5 Domain of unknown function (DUF362) - - - 0.000000000000000000000000000000000000000001234 163.0
HKD3_k127_4998389_6 DinB family - - - 0.00000000000000000000000000000000000001648 147.0
HKD3_k127_4998389_7 - - - - 0.00000000000000000000000000000000000002195 149.0
HKD3_k127_4998389_8 Protein of unknown function DUF45 K07043 - - 0.0000000000000000000000000001298 122.0
HKD3_k127_4998389_9 PFAM regulatory protein, MerR - - - 0.0000000000000000000000000001519 123.0
HKD3_k127_4999541_0 Aminotransferase class-V - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 605.0
HKD3_k127_4999541_1 Penicillin-binding protein, dimerisation domain K03587 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001768 535.0
HKD3_k127_4999541_2 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009236 395.0
HKD3_k127_4999541_3 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.0000000000000000000000000000000000000000000000000000000000000000004192 234.0
HKD3_k127_4999541_4 Belongs to the MraZ family K03925 - - 0.000000000000000000000000000000000000001358 151.0
HKD3_k127_4999541_5 Acetyltransferase (GNAT) domain - - - 0.00000000000002755 76.0
HKD3_k127_5006329_0 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001663 282.0
HKD3_k127_5006329_1 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003308 274.0
HKD3_k127_5006329_2 ABC transporter K06158 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008934 271.0
HKD3_k127_5006329_3 PFAM Phosphoglycerate mutase family K02226 - 3.1.3.73 0.0000000000000006393 85.0
HKD3_k127_5006329_4 SNARE-like domain protein - - - 0.0001409 52.0
HKD3_k127_5053095_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 1616.0
HKD3_k127_5053095_1 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008727 325.0
HKD3_k127_5053095_2 YhhN family - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000001723 129.0
HKD3_k127_5053095_3 Polymer-forming cytoskeletal - - - 0.000000000447 66.0
HKD3_k127_5076597_0 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system K01547 - 3.6.3.12 3.506e-310 963.0
HKD3_k127_5076597_1 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane K01546 - 3.6.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001467 555.0
HKD3_k127_5076597_2 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex K01548 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0008556,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0031004,GO:0031224,GO:0032991,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044425,GO:0044464,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0071944,GO:0090533,GO:0090662,GO:0098533,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1902494,GO:1902495,GO:1904949,GO:1990351 3.6.3.12 0.0000000000000000000000000111 110.0
HKD3_k127_5076597_3 PFAM Osmosensitive K channel His kinase sensor K07646 - 2.7.13.3 0.0000000000000009834 86.0
HKD3_k127_5084058_0 PFAM ABC transporter related K02056 - 3.6.3.17 2.252e-202 642.0
HKD3_k127_5084058_1 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 504.0
HKD3_k127_5084058_10 Periplasmic binding protein K01999 - - 0.0000000000000000000000000000000000000000000000000002106 215.0
HKD3_k127_5084058_11 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000000004871 139.0
HKD3_k127_5084058_12 This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis K01489 - 3.5.4.5 0.000000000000000000000000000000003167 130.0
HKD3_k127_5084058_13 ABC transporter substrate-binding protein PnrA-like K02058,K05519,K07335 - - 0.00000000000000000000000000001152 132.0
HKD3_k127_5084058_14 DNA-binding transcription factor activity K04096 - - 0.00000000000000000000000000001505 121.0
HKD3_k127_5084058_15 PFAM Archaeal ATPase K06921 - - 0.000000000000000000001443 108.0
HKD3_k127_5084058_16 Putative sensor - - - 0.0005817 44.0
HKD3_k127_5084058_2 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003633 468.0
HKD3_k127_5084058_3 ABC transporter substrate-binding protein PnrA-like K07335 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 385.0
HKD3_k127_5084058_4 COGs COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase) K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007806 305.0
HKD3_k127_5084058_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007358 280.0
HKD3_k127_5084058_6 Domain of unknown function (DUF389) - - - 0.000000000000000000000000000000000000000000000000000000000000000000005415 249.0
HKD3_k127_5084058_7 L-lysine catabolic process to acetate K18013 - 2.3.1.247 0.00000000000000000000000000000000000000000000000000000000000000000003148 236.0
HKD3_k127_5084058_8 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K00058,K11216 - 1.1.1.399,1.1.1.95,2.7.1.189 0.00000000000000000000000000000000000000000000000000000001448 206.0
HKD3_k127_5084058_9 Haloacid dehalogenase domain protein hydrolase - - - 0.00000000000000000000000000000000000000000000000000000003262 199.0
HKD3_k127_5094944_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004654,GO:0005488,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 0.0 1056.0
HKD3_k127_5094944_1 Polynucleotide adenylyltransferase region K00974 - 2.7.7.72 2.742e-280 887.0
HKD3_k127_5094944_10 cytokinin biosynthetic process K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000001893 179.0
HKD3_k127_5094944_11 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.00000000000000000000000000000003612 131.0
HKD3_k127_5094944_12 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000001849 125.0
HKD3_k127_5094944_14 MazG-like family - - - 0.000000000000000000000000000006359 121.0
HKD3_k127_5094944_15 4 iron, 4 sulfur cluster binding - - - 0.000000000000000000000008265 105.0
HKD3_k127_5094944_16 Peptidase family M48 - - - 0.00000000000000000000006347 109.0
HKD3_k127_5094944_2 Molybdopterin oxidoreductase Fe4S4 domain K00123 - 1.17.1.9 2.093e-273 849.0
HKD3_k127_5094944_3 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017101,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.15 2.564e-247 769.0
HKD3_k127_5094944_4 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00335 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002026 477.0
HKD3_k127_5094944_5 Molybdopterin oxidoreductase Fe4S4 domain K00123 - 1.17.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000284 454.0
HKD3_k127_5094944_6 Adenosine/AMP deaminase K01488,K18286 GO:0000034,GO:0003674,GO:0003824,GO:0006139,GO:0006144,GO:0006145,GO:0006146,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009113,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0018130,GO:0019239,GO:0019438,GO:0019439,GO:0034641,GO:0034654,GO:0042440,GO:0043094,GO:0043096,GO:0043101,GO:0043103,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0046083,GO:0046100,GO:0046101,GO:0046112,GO:0046113,GO:0046148,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0072523,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.5.4.4,3.5.4.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000172 291.0
HKD3_k127_5094944_7 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.00000000000000000000000000000000000000000000000000000000000000000001185 242.0
HKD3_k127_5094944_8 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000005081 226.0
HKD3_k127_5094944_9 acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000003226 194.0
HKD3_k127_51047_0 intracellular signal transduction - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009174 535.0
HKD3_k127_51047_1 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002592 397.0
HKD3_k127_51047_2 VIT family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002818 389.0
HKD3_k127_51047_3 PFAM oxidoreductase, molybdopterin binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 308.0
HKD3_k127_51047_4 PFAM oxidoreductase FAD NAD(P)-binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 299.0
HKD3_k127_51047_5 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002901 242.0
HKD3_k127_51047_6 Protein of unknown function (DUF664) - - - 0.0000000000000000000000000000000000000000000000000000000003686 207.0
HKD3_k127_51047_7 PFAM transcriptional coactivator pterin dehydratase K01724 - 4.2.1.96 0.0000000000000000000000000000000000001438 144.0
HKD3_k127_51047_8 - - - - 0.00000000000000008817 84.0
HKD3_k127_51047_9 serine-type aminopeptidase activity K14475 - - 0.00000001919 66.0
HKD3_k127_5125520_0 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000006618 239.0
HKD3_k127_5125520_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000004403 258.0
HKD3_k127_5125520_2 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000009197 225.0
HKD3_k127_5125520_3 amino acid-binding ACT domain protein K04767 - - 0.00000000000000000000000000000000000000000000000000000000000104 217.0
HKD3_k127_5125520_4 ABC transporter - - - 0.000000000000000000000000000000000000000000004313 166.0
HKD3_k127_5125520_5 Predicted membrane protein (DUF2085) - - - 0.00000000000000000000000000000000000000000002261 170.0
HKD3_k127_5125520_6 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000003131 175.0
HKD3_k127_5150630_0 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 4.797e-249 799.0
HKD3_k127_5150630_1 SMART AAA ATPase - - - 3.478e-222 694.0
HKD3_k127_5150630_10 Serine threonine protein kinase K08884 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006629 474.0
HKD3_k127_5150630_11 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008270,GO:0008479,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046116,GO:0046483,GO:0046872,GO:0046914,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 444.0
HKD3_k127_5150630_12 TIGRFAM Glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0036094,GO:0043891,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.2.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 428.0
HKD3_k127_5150630_13 CpXC protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006528 400.0
HKD3_k127_5150630_14 CO dehydrogenase/acetyl-CoA synthase delta subunit K00197 - 2.1.1.245 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003384 397.0
HKD3_k127_5150630_15 PFAM ROK family protein K00845 - 2.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009317 375.0
HKD3_k127_5150630_16 Glycosyl transferase, family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002334 351.0
HKD3_k127_5150630_17 one-carbon metabolic process K00194,K00198 - 1.2.7.4,2.1.1.245 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007312 329.0
HKD3_k127_5150630_18 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003336 315.0
HKD3_k127_5150630_19 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 302.0
HKD3_k127_5150630_2 His Kinase A (phosphoacceptor) domain - - - 3.171e-219 691.0
HKD3_k127_5150630_20 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009525 292.0
HKD3_k127_5150630_21 lipid binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001862 291.0
HKD3_k127_5150630_22 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000001661 278.0
HKD3_k127_5150630_23 Anion-transporting ATPase K07321 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002792 260.0
HKD3_k127_5150630_24 histone H2A K63-linked ubiquitination - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003271 247.0
HKD3_k127_5150630_25 AAA domain K07321 - - 0.0000000000000000000000000000000000000000000000000000000000000000002223 238.0
HKD3_k127_5150630_26 Participates in transcription elongation, termination and antitermination K02601,K05785 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000009557 226.0
HKD3_k127_5150630_27 Pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000001054 229.0
HKD3_k127_5150630_28 PFAM Glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.0000000000000000000000000000000000000000000000000000000000000131 224.0
HKD3_k127_5150630_29 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000000000000000000000000000000000001281 217.0
HKD3_k127_5150630_3 Malic enzyme, NAD binding domain K00027,K00029 - 1.1.1.38,1.1.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 606.0
HKD3_k127_5150630_30 PFAM Patatin K07001 - - 0.000000000000000000000000000000000000000000000000000000000002406 219.0
HKD3_k127_5150630_31 Cys-tRNA(Pro) hydrolase activity K03976,K19055 - - 0.00000000000000000000000000000000000000000000000000000001266 201.0
HKD3_k127_5150630_32 - - - - 0.000000000000000000000000000000000000000000000000000001422 200.0
HKD3_k127_5150630_33 Pterin binding enzyme K00548,K15023 - 2.1.1.13,2.1.1.258 0.00000000000000000000000000000000000000000000000405 184.0
HKD3_k127_5150630_34 PFAM Respiratory-chain NADH dehydrogenase 24 Kd subunit K00334 - 1.6.5.3 0.0000000000000000000000000000000000000000000003224 176.0
HKD3_k127_5150630_35 Acyl CoA acetate 3-ketoacid CoA K01040 - 2.8.3.12 0.0000000000000000000000000000000000001402 151.0
HKD3_k127_5150630_36 PFAM low molecular weight phosphotyrosine protein phosphatase K01104 - 3.1.3.48 0.00000000000000000000000000000000306 135.0
HKD3_k127_5150630_37 PFAM phospholipase Carboxylesterase K06999 - - 0.0000000000000000000000000000005722 130.0
HKD3_k127_5150630_38 Methylene-tetrahydrofolate reductase C terminal - - - 0.00000000000000001216 96.0
HKD3_k127_5150630_4 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005319 599.0
HKD3_k127_5150630_5 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823 - 2.6.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 584.0
HKD3_k127_5150630_6 Required for morphogenesis under gluconeogenic growth conditions - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005846 579.0
HKD3_k127_5150630_7 PFAM phosphoesterase, RecJ domain protein K07462 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 576.0
HKD3_k127_5150630_8 PFAM CO dehydrogenase acetyl-CoA synthase complex beta subunit K14138 - 2.3.1.169 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 543.0
HKD3_k127_5150630_9 PFAM 2Fe-2S iron-sulfur cluster binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003047 512.0
HKD3_k127_5158031_0 PFAM carboxyl transferase K01966 - 2.1.3.15,6.4.1.3 7.729e-250 779.0
HKD3_k127_5158031_1 acetyl-CoA carboxylase K01961 - 6.3.4.14,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004369 554.0
HKD3_k127_5158031_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000002077 227.0
HKD3_k127_5158031_3 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000009934 155.0
HKD3_k127_5158031_4 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000008696 134.0
HKD3_k127_5158031_5 Biotin-requiring enzyme - - - 0.000000000000000000000005183 108.0
HKD3_k127_51757_0 MFS/sugar transport protein - - - 0.0000000000000000000000000000000000000000000000000001132 204.0
HKD3_k127_51757_1 OsmC-like protein K09136 - - 0.00000000000000000000000000000000000000000000000002786 182.0
HKD3_k127_51757_2 DNA-binding transcription factor activity - - - 0.000000000000001128 89.0
HKD3_k127_5191626_0 Belongs to the peptidase S16 family - - - 7.146e-263 833.0
HKD3_k127_5191626_1 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 1.877e-213 675.0
HKD3_k127_5191626_2 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002505 544.0
HKD3_k127_5191626_3 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 304.0
HKD3_k127_5191626_4 Melibiase K07407 - 3.2.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001404 297.0
HKD3_k127_5191626_5 Cation transporting ATPase, C-terminus K01531 - 3.6.3.2 0.0000000000000000000000000000002258 126.0
HKD3_k127_5191626_6 Psort location Cytoplasmic, score - - - 0.00000000000000000459 91.0
HKD3_k127_5191721_0 Heat shock 70 kDa protein K04043 - - 1.36e-321 993.0
HKD3_k127_5191721_1 PFAM Cytochrome C assembly protein K02198 - - 2.669e-289 903.0
HKD3_k127_5191721_10 - - - - 0.00000000000000000000000000000000000000000002843 173.0
HKD3_k127_5191721_11 ribosomal protein - - - 0.0000000000000000000000000000000000000001896 153.0
HKD3_k127_5191721_12 Ribbon-helix-helix domain - - - 0.000000000000000000000000000000000000006607 154.0
HKD3_k127_5191721_13 subunit of a heme lyase K02200 - - 0.00000000000000000000000000000000276 134.0
HKD3_k127_5191721_2 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000296 452.0
HKD3_k127_5191721_3 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686,K05516 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004584 396.0
HKD3_k127_5191721_4 PFAM NMT1 THI5 like domain protein K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002043 376.0
HKD3_k127_5191721_5 Ribosomal protein L11 methyltransferase K02687 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008215 348.0
HKD3_k127_5191721_6 ATPases associated with a variety of cellular activities K02049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002146 306.0
HKD3_k127_5191721_7 PFAM binding-protein-dependent transport systems inner membrane component K02050 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006412 295.0
HKD3_k127_5191721_8 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.000000000000000000000000000000000000000000000000000000000003969 212.0
HKD3_k127_5191721_9 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.0000000000000000000000000000000000000000000007092 172.0
HKD3_k127_5192853_0 ABC transporter transmembrane region - - - 2.935e-229 725.0
HKD3_k127_5192853_1 (ABC) transporter K06147 - - 4.72e-216 686.0
HKD3_k127_5192853_10 COG0474 Cation transport ATPase K01537 - 3.6.3.8 0.0000000000000000000000000004311 121.0
HKD3_k127_5192853_11 - - - - 0.0000000000000000003114 98.0
HKD3_k127_5192853_12 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.000000000000000003186 99.0
HKD3_k127_5192853_2 Belongs to the peptidase M50B family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002511 350.0
HKD3_k127_5192853_3 domain, Protein K01212,K12287,K20276 - 3.2.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 366.0
HKD3_k127_5192853_4 Methyltransferase small domain - - - 0.000000000000000000000000000000000000000000000000000000000000001516 228.0
HKD3_k127_5192853_5 Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase) K05827,K05844 - 6.3.2.43 0.00000000000000000000000000000000000000000000000000000000000003639 225.0
HKD3_k127_5192853_6 Probably functions as a manganese efflux pump - - - 0.0000000000000000000000000000000000000000000000000000137 194.0
HKD3_k127_5192853_7 PFAM Acetyltransferase (GNAT) family K00657 - 2.3.1.57 0.00000000000000000000000000000000000000000000005835 173.0
HKD3_k127_5192853_8 PFAM phospholipid glycerol acyltransferase - - - 0.0000000000000000000000000000000000000001039 164.0
HKD3_k127_5192853_9 Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE K06039,K07235 - - 0.0000000000000000000000000001875 118.0
HKD3_k127_5204398_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 3.194e-261 816.0
HKD3_k127_5204398_1 PFAM ABC transporter related K06158 - - 1.408e-209 671.0
HKD3_k127_5204398_10 ABC transporter K01990 - - 0.00000000000000000000000000000000000008235 150.0
HKD3_k127_5204398_11 - - - - 0.000000000000000000000000000000000005314 139.0
HKD3_k127_5204398_12 PFAM Stage V sporulation protein S K06416 - - 0.000000000000000000000000000002219 122.0
HKD3_k127_5204398_13 - - - - 0.00000000000000000000003646 106.0
HKD3_k127_5204398_15 PFAM Ig domain protein group 2 domain protein - - - 0.000000000000003199 90.0
HKD3_k127_5204398_16 - - - - 0.00002868 55.0
HKD3_k127_5204398_2 NAD(P)H-binding K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005754 471.0
HKD3_k127_5204398_3 TIGRFAM cell envelope-related function transcriptional attenuator, LytR CpsA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001899 421.0
HKD3_k127_5204398_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002408 414.0
HKD3_k127_5204398_5 TIGRFAM cell envelope-related function transcriptional attenuator, LytR CpsA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008996 414.0
HKD3_k127_5204398_6 PFAM ComEC Rec2-related protein K02238 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002809 371.0
HKD3_k127_5204398_7 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K05996,K06987,K07752 - 3.4.17.18,3.4.17.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001999 303.0
HKD3_k127_5204398_8 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000000000009176 175.0
HKD3_k127_523439_0 NmrA-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003397 541.0
HKD3_k127_523439_1 SAF K01654 - 2.5.1.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018 509.0
HKD3_k127_523439_2 PFAM NAD-dependent epimerase dehydratase K00067 - 1.1.1.133 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002714 315.0
HKD3_k127_523439_3 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003409 313.0
HKD3_k127_523439_4 PFAM glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000005076 171.0
HKD3_k127_523439_5 bis(5'-adenosyl)-triphosphatase activity - - - 0.000000000000000000000000000000000000000000001217 169.0
HKD3_k127_523439_6 lipid-A-disaccharide synthase activity K00748 - 2.4.1.182 0.000000000000000000000000000000005006 130.0
HKD3_k127_5276112_0 Multicopper K04753 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000815 436.0
HKD3_k127_5276112_1 Domain of unknown function DUF11 - - - 0.0000000000000000000000000000000000000000000005372 180.0
HKD3_k127_5276112_2 Secreted repeat of unknown function - - - 0.000000000000000000000000000000000000000003292 175.0
HKD3_k127_5276112_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000004823 155.0
HKD3_k127_5276112_4 Secreted repeat of unknown function - - - 0.0000000000000000000009736 110.0
HKD3_k127_5276112_5 Anti-sigma-K factor rskA - - - 0.0000000000000000003539 99.0
HKD3_k127_5276112_6 A domain family that is part of the cupin metalloenzyme superfamily. - - - 0.00000000000001026 86.0
HKD3_k127_5276112_8 photosynthesis - - - 0.00000006581 65.0
HKD3_k127_5276112_9 antibiotic catabolic process K14166 - - 0.00000008217 66.0
HKD3_k127_5282557_0 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003657 353.0
HKD3_k127_5282557_1 Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway K16329 - 4.2.1.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004633 335.0
HKD3_k127_5282557_3 PFAM PfkB domain protein K16328 - 2.7.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004249 313.0
HKD3_k127_5282557_4 Domain of unknown function (DUF362) - - - 0.000000000000000000000000000000000000000000000000000000000000000007679 228.0
HKD3_k127_5282557_5 DNA-binding transcription factor activity - - - 0.0000000000000000000001998 107.0
HKD3_k127_531051_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1190.0
HKD3_k127_531051_1 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006167 385.0
HKD3_k127_531051_2 acyl-phosphate glycerol-3-phosphate acyltransferase activity K08591 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000001314 225.0
HKD3_k127_531051_3 proteolysis K21140 - 3.13.1.6 0.000000000000000000000001207 109.0
HKD3_k127_5314963_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.0 1372.0
HKD3_k127_5314963_1 PFAM Aminotransferase class I and II K05825 - - 1.824e-196 619.0
HKD3_k127_5314963_2 PFAM AAA ATPase central domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 356.0
HKD3_k127_5314963_3 D-isomer specific 2-hydroxyacid dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002834 266.0
HKD3_k127_5314963_4 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH K00033 - 1.1.1.343,1.1.1.44 0.00000000000000000000000000000000001366 136.0
HKD3_k127_5314963_5 peptidyl-prolyl cis-trans isomerase K01802,K03772 - 5.2.1.8 0.000000000000000000000000000007233 119.0
HKD3_k127_5322560_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.0 1735.0
HKD3_k127_5322560_1 Phosphoglucomutase/phosphomannomutase, C-terminal domain - - - 2.492e-231 724.0
HKD3_k127_5322560_10 pseudouridine synthase activity K06178,K06181,K06183 - 5.4.99.19,5.4.99.20,5.4.99.22 0.0000000000000000000000000000000000000000000000000000000000000001087 244.0
HKD3_k127_5322560_11 - - - - 0.000000000000000000000000000000000000000000000000000000000001975 217.0
HKD3_k127_5322560_12 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000006175 209.0
HKD3_k127_5322560_13 - - - - 0.000000000000000000000000000000000000000000003387 178.0
HKD3_k127_5322560_14 - - - - 0.0000000000000000000000000000000005794 139.0
HKD3_k127_5322560_15 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.0000000000000000000000000000000007154 132.0
HKD3_k127_5322560_16 - - - - 0.0000000000000000000000009291 112.0
HKD3_k127_5322560_17 Ribosomal protein S21 K02970 - - 0.00000000000000000002215 93.0
HKD3_k127_5322560_2 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 475.0
HKD3_k127_5322560_20 Peptidoglycan-binding lysin domain - - - 0.000005219 58.0
HKD3_k127_5322560_3 Catalyzes the conversion of dihydroorotate to orotate K00226 - 1.3.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007715 443.0
HKD3_k127_5322560_4 Carbohydrate kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000037 427.0
HKD3_k127_5322560_5 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008182 310.0
HKD3_k127_5322560_6 PFAM metallophosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005311 302.0
HKD3_k127_5322560_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004724 293.0
HKD3_k127_5322560_8 Domain of unknown function (DUF4349) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001215 259.0
HKD3_k127_5322560_9 signal-transduction protein containing cAMP-binding and CBS domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001028 262.0
HKD3_k127_5379947_0 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor K02275 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001445 295.0
HKD3_k127_5379947_1 WD40 repeats - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000755 269.0
HKD3_k127_5379947_2 Protein of unknown function with PCYCGC motif - - - 0.000000000000000000000001481 108.0
HKD3_k127_5379947_3 Heme copper-type cytochrome quinol oxidases, subunit 2 K02275,K02826,K15864 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016679,GO:0016682,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0071944,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.10.3.12,1.7.2.1,1.7.99.1,1.9.3.1 0.000000000000000000009099 98.0
HKD3_k127_5379947_4 GAF domain - - - 0.00002431 57.0
HKD3_k127_540161_0 conserved protein (DUF2156) K14205 - 2.3.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001399 580.0
HKD3_k127_540161_1 Mut7-C RNAse domain K09122 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004539 267.0
HKD3_k127_540161_10 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.0000000000000008089 83.0
HKD3_k127_540161_2 Thioesterase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005739 246.0
HKD3_k127_540161_3 - - - - 0.000000000000000000000000000000000000000000000003109 185.0
HKD3_k127_540161_4 chain release factor K15034 - - 0.000000000000000000000000000000000000000000772 160.0
HKD3_k127_540161_5 Lysylphosphatidylglycerol synthase TM region - - - 0.000000000000000000000000000000000000001054 171.0
HKD3_k127_540161_6 Protein of unknown function (DUF3052) - - - 0.0000000000000000000002983 102.0
HKD3_k127_540161_7 Belongs to the UPF0250 family K09158 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000003218 87.0
HKD3_k127_540161_9 Uncharacterized protein family UPF0029 K00560,K01271 - 2.1.1.45,3.4.13.9 0.00000000000000006511 84.0
HKD3_k127_5406389_0 Glycosyl transferase family group 2 K07011 - - 0.0000000000000000000000000000000000000000000000000008422 195.0
HKD3_k127_5406389_1 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.00000000000000000000000000000000000000000001008 166.0
HKD3_k127_5406389_2 Protein of unknown function (DUF1706) - - - 0.000000000000000000000000000000001181 135.0
HKD3_k127_540959_0 pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for K15987 - 3.6.1.1 1.132e-263 833.0
HKD3_k127_540959_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 2.894e-207 650.0
HKD3_k127_540959_2 - K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002148 458.0
HKD3_k127_540959_3 PFAM ABC transporter related K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004714 396.0
HKD3_k127_540959_4 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005513 384.0
HKD3_k127_540959_5 - K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002767 246.0
HKD3_k127_540959_6 Squalene-hopene cyclase N-terminal domain K06045 - 4.2.1.129,5.4.99.17 0.000000002129 68.0
HKD3_k127_540959_7 Domain of unknown function (DUF4340) - - - 0.0001645 51.0
HKD3_k127_5514308_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 7.187e-194 612.0
HKD3_k127_5514308_1 PFAM metal-dependent phosphohydrolase, HD sub domain K01129 - 3.1.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 579.0
HKD3_k127_5514308_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009936 277.0
HKD3_k127_5514308_4 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.000000000000000000000000000000000000000001022 161.0
HKD3_k127_5514308_5 PFAM aspartate glutamate uridylate kinase K06981 - 2.7.4.26 0.0000000000000000000000000000597 121.0
HKD3_k127_5551972_0 COGs COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL CutL homologs K12528 - - 0.0 1426.0
HKD3_k127_5551972_1 PFAM DNA methylase N-4 N-6 domain protein K00571 - 2.1.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004275 426.0
HKD3_k127_5551972_2 FAD binding domain in molybdopterin dehydrogenase K03519,K12529 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000353 208.0
HKD3_k127_5551972_3 TIGRFAM LPPG domain protein containing protein K11212 - 2.7.8.28 0.0000000000000000000000000000000000000000000000000001534 191.0
HKD3_k127_5551972_4 Guanylyltransferase that catalyzes the activation of 2- phospho-L-lactate (LP) as (2S)-lactyl-2-diphospho-5'-guanosine (LPPG), via the condensation of LP with GTP. Is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor K14941 GO:0003674,GO:0003824,GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0043814,GO:0044237,GO:0044249,GO:0051186,GO:0051188,GO:0070568 2.7.7.68 0.00000000000000000000000000000000000000000000000009948 184.0
HKD3_k127_5551972_5 Thioesterase superfamily protein - - - 0.000000000000000000000000000000000000000000000001928 177.0
HKD3_k127_5551972_6 mannose-ethanolamine phosphotransferase activity K05288 - - 0.00000000000005543 85.0
HKD3_k127_5551972_7 DHHA2 K15986 - 3.6.1.1 0.00002042 46.0
HKD3_k127_5554601_0 teichoic acid transport K01990,K09689,K09691 - 3.6.3.38 2.247e-195 616.0
HKD3_k127_5554601_1 lipid-A-disaccharide synthase activity K00748 - 2.4.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 550.0
HKD3_k127_5554601_2 ABC-2 type transporter K09690 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002924 313.0
HKD3_k127_5554601_3 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.000000000000000000000000000000000000000000000000000000000000000000000003416 245.0
HKD3_k127_5571778_0 Protein of unknown function (DUF1232) - - - 0.00000000000000000000000000000000000003386 147.0
HKD3_k127_5571778_1 PFAM Isoprenylcysteine carboxyl methyltransferase - - - 0.00000000000000000000000000001118 125.0
HKD3_k127_5571778_2 - - - - 0.000000000000000000000000004723 118.0
HKD3_k127_5571778_3 Domain of unknown function (DUF4342) - - - 0.0000000000000000000007445 97.0
HKD3_k127_5571778_4 GIY-YIG catalytic domain - - - 0.000000000000000000003628 95.0
HKD3_k127_5571778_5 TIGRFAM C_GCAxxG_C_C family protein - - - 0.0000000000000000009883 88.0
HKD3_k127_5571778_6 Belongs to the peptidase M50B family K06402 - - 0.0000000002162 71.0
HKD3_k127_5571778_7 Acetyltransferase (GNAT) family - - - 0.00000004955 64.0
HKD3_k127_558912_0 phenylalanyl-tRNA synthetase beta subunit K01890 - 6.1.1.20 2.5e-323 1011.0
HKD3_k127_558912_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000352 464.0
HKD3_k127_558912_2 PBP superfamily domain K05772 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001634 327.0
HKD3_k127_558912_3 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03769 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000004489 243.0
HKD3_k127_558912_4 Binding-protein-dependent transport system inner membrane component K05773 - - 0.0000000000000000000000000000000000000000006876 162.0
HKD3_k127_558912_6 23S rRNA-intervening sequence protein - - - 0.0000000000000000000000003066 111.0
HKD3_k127_558912_7 TOBE domain - - - 0.000000000000000000001827 96.0
HKD3_k127_558912_8 AP endonuclease family 2 K01151 - 3.1.21.2 0.00005036 45.0
HKD3_k127_5644836_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 4.141e-217 678.0
HKD3_k127_5644836_1 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006085 418.0
HKD3_k127_5644836_2 lysyltransferase activity K07027 - - 0.0000000000000000000000000000000000000001413 163.0
HKD3_k127_5690077_0 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 GO:0003674,GO:0003824,GO:0005215,GO:0006810,GO:0006811,GO:0006817,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015114,GO:0015318,GO:0015399,GO:0015405,GO:0015415,GO:0015698,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0034220,GO:0035435,GO:0042623,GO:0042626,GO:0043225,GO:0043492,GO:0051179,GO:0051234,GO:0055085,GO:0098656,GO:0098660,GO:0098661,GO:0099133 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002002 356.0
HKD3_k127_5690077_1 TIGRFAM phosphate ABC transporter, phosphate-binding protein K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001747 305.0
HKD3_k127_5690077_2 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000528 281.0
HKD3_k127_5690077_3 TIGRFAM phosphate ABC transporter, permease protein PstA K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000702 254.0
HKD3_k127_5690077_4 Plays a role in the regulation of phosphate uptake K02039 - - 0.0000000000000000000000000000000000000000000000000000000000000000005831 234.0
HKD3_k127_5690077_5 Low molecular weight phosphotyrosine protein phosphatase K03741 - 1.20.4.1 0.000000000000000000000000000000000000000000000000004804 184.0
HKD3_k127_5690077_6 PFAM ATP-binding region, ATPase domain protein K07636 - 2.7.13.3 0.00000000000000000000000000000007383 126.0
HKD3_k127_5690077_7 NfeD-like C-terminal, partner-binding K07403 - - 0.00000000000000000000000001813 111.0
HKD3_k127_5690077_8 - - - - 0.0000000000000000000008584 102.0
HKD3_k127_5697056_0 PFAM sodium calcium exchanger membrane region K07300 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008214 390.0
HKD3_k127_5697056_1 SMART serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005248 341.0
HKD3_k127_5697056_2 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family K04088,K06897 - 2.5.1.105 0.00000000000000000000000000000000000000000000000000000000000000000000000000005619 267.0
HKD3_k127_5697056_3 Belongs to the ribulose-phosphate 3-epimerase family K01783 GO:0003674,GO:0003824,GO:0004750,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009052,GO:0009056,GO:0009117,GO:0009987,GO:0016052,GO:0016853,GO:0016854,GO:0016857,GO:0019321,GO:0019323,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046483,GO:0046496,GO:0046872,GO:0051156,GO:0051186,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564,GO:1901575 5.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000794 218.0
HKD3_k127_5697056_4 LysE type translocator - - - 0.000000000000000000000000000000000000000003411 158.0
HKD3_k127_5697056_5 Protein of unknown function (DUF971) - - - 0.000000000000000000000000000000000000000916 150.0
HKD3_k127_5697056_6 diacylglycerol kinase, catalytic region - - - 0.00000000000000000000000000000079 133.0
HKD3_k127_5697056_7 antibiotic catabolic process K13277 - - 0.0000148 54.0
HKD3_k127_5844643_0 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005145 297.0
HKD3_k127_5844643_1 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001637 276.0
HKD3_k127_5844643_2 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000000002426 236.0
HKD3_k127_5847489_0 PFAM C4-dicarboxylate anaerobic carrier-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 454.0
HKD3_k127_5847489_1 Peptidase dimerisation domain K01439 - 3.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 379.0
HKD3_k127_5847489_2 amidohydrolase K21613 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002057 357.0
HKD3_k127_5847489_3 2-aminoethylphosphonate-pyruvate transaminase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000132 295.0
HKD3_k127_5847489_4 MafB19-like deaminase K01493 - 3.5.4.12 0.00000000000000000000000000000000000000000000000000000000006721 207.0
HKD3_k127_5847489_5 O-methyltransferase K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000009449 199.0
HKD3_k127_5847489_6 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.0000000000000000000000000000000000000001652 160.0
HKD3_k127_5847489_7 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.000000000000002767 77.0
HKD3_k127_5893558_0 N-terminal 7TM region of histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000305 563.0
HKD3_k127_5893558_1 aromatic amino acid beta-eliminating lyase threonine aldolase K01620 - 4.1.2.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002291 455.0
HKD3_k127_5893558_2 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 381.0
HKD3_k127_5893558_3 PFAM RNA binding S1 domain protein K02945,K03527 - 1.17.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002631 310.0
HKD3_k127_5893558_4 Responsible for synthesis of pseudouridine from uracil K06180 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000001299 226.0
HKD3_k127_5893558_5 acetyltransferase K06889,K19273 - - 0.000000000000000000000000000000000000002697 153.0
HKD3_k127_5893558_6 - - - - 0.0000000000000000000000000000000000163 144.0
HKD3_k127_5893558_7 - - - - 0.000002113 57.0
HKD3_k127_6050268_0 formate C-acetyltransferase glycine radical - - - 0.0 1206.0
HKD3_k127_6050268_1 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 1.646e-286 896.0
HKD3_k127_6050268_10 PFAM Vitamin K epoxide reductase - - - 0.000000000000000000000000000000000000000000000000000000000000233 224.0
HKD3_k127_6050268_11 protein-(glutamine-N5) methyltransferase activity K00571 - 2.1.1.72 0.000000000000000000000000000000000000000000000931 176.0
HKD3_k127_6050268_2 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 3.062e-200 631.0
HKD3_k127_6050268_3 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002998 572.0
HKD3_k127_6050268_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002216 527.0
HKD3_k127_6050268_5 WD40 domain protein beta Propeller K03641 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002175 508.0
HKD3_k127_6050268_6 Transmembrane secretion effector - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002284 428.0
HKD3_k127_6050268_7 heme binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009901 353.0
HKD3_k127_6050268_8 PFAM DegV family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001187 287.0
HKD3_k127_6050268_9 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000005087 233.0
HKD3_k127_6053845_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.0 1033.0
HKD3_k127_6053845_1 Required for chromosome condensation and partitioning K03529 - - 1.024e-302 967.0
HKD3_k127_6053845_10 Belongs to the SOS response-associated peptidase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001744 256.0
HKD3_k127_6053845_11 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03635,K21142 - 2.8.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000007044 256.0
HKD3_k127_6053845_12 ubiE/COQ5 methyltransferase family K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000005103 195.0
HKD3_k127_6053845_13 Probably plays a role in a hydrogenase nickel cofactor insertion step K04651 - - 0.000000000000000000000000000000000003534 139.0
HKD3_k127_6053845_14 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.0000000000000000000000000003569 115.0
HKD3_k127_6053845_15 Metal-sensitive transcriptional repressor K21600 - - 0.000000000000000000000000001771 113.0
HKD3_k127_6053845_16 PFAM hydrogenase expression formation protein (HUPF HYPC) K04653 - - 0.00000000000000000000000004553 109.0
HKD3_k127_6053845_17 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 - 2.1.1.74 0.00000000000000000000001242 102.0
HKD3_k127_6053845_19 mercury ion transmembrane transporter activity K07213 - - 0.000000000000000006038 85.0
HKD3_k127_6053845_2 Belongs to the carbamoyltransferase HypF family K04656 - - 2.131e-269 851.0
HKD3_k127_6053845_3 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 6.384e-224 718.0
HKD3_k127_6053845_4 hydrogenase expression formation protein HypD K04654 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000191 529.0
HKD3_k127_6053845_5 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002599 507.0
HKD3_k127_6053845_6 hydrogenase expression formation protein HypE K04655 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007949 436.0
HKD3_k127_6053845_7 PFAM MOFRL domain protein K11529 - 2.7.1.165 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001537 402.0
HKD3_k127_6053845_8 Hydrogenase accessory protein HypB K03189,K04652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002617 284.0
HKD3_k127_6053845_9 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000162 272.0
HKD3_k127_6068941_0 Fibronectin type III-like domain K05349 - 3.2.1.21 2.363e-260 822.0
HKD3_k127_6068941_1 Catalyzes the conversion of L-arabinose to L-ribulose K01804 - 5.3.1.4 2.317e-238 745.0
HKD3_k127_6068941_10 Alcohol dehydrogenase GroES-like domain K00004,K00008,K00098 - 1.1.1.14,1.1.1.264,1.1.1.303,1.1.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002296 349.0
HKD3_k127_6068941_11 ATPases associated with a variety of cellular activities K02056 - 3.6.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001986 341.0
HKD3_k127_6068941_12 Branched-chain amino acid transport system / permease component K02057 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 331.0
HKD3_k127_6068941_13 Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003061 301.0
HKD3_k127_6068941_14 B12 binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002547 252.0
HKD3_k127_6068941_15 4Fe-4S single cluster domain K04069 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000007797 241.0
HKD3_k127_6068941_16 Transglutaminase-like superfamily - - - 0.00000000000000000001626 103.0
HKD3_k127_6068941_17 Bacterial regulatory proteins, tetR family - - - 0.00000002045 55.0
HKD3_k127_6068941_2 FGGY family of carbohydrate kinases, N-terminal domain K00853 - 2.7.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002054 582.0
HKD3_k127_6068941_3 formate C-acetyltransferase activity K00656 - 2.3.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003313 589.0
HKD3_k127_6068941_4 Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005477 479.0
HKD3_k127_6068941_5 ABC-type sugar transport system periplasmic component K02058,K10439 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 423.0
HKD3_k127_6068941_6 Metallopeptidase family M24 K18829 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004031 410.0
HKD3_k127_6068941_7 Periplasmic binding protein-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 376.0
HKD3_k127_6068941_8 Uroporphyrinogen decarboxylase (URO-D) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 374.0
HKD3_k127_6068941_9 PFAM major facilitator superfamily MFS_1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002321 358.0
HKD3_k127_6073175_0 PFAM alpha-2-macroglobulin domain protein K06894 - - 3.327e-219 723.0
HKD3_k127_6073175_1 PFAM Cys Met metabolism pyridoxal-phosphate-dependent protein K01739,K01761 - 2.5.1.48,4.4.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001802 526.0
HKD3_k127_6086106_0 von Willebrand factor, type A K07114 - - 0.00000000000000000000000000000000000000000000006095 185.0
HKD3_k127_6086106_1 Toxic component of a toxin-antitoxin (TA) module K07171 - - 0.0000000000000000000000000000000000000000000002653 168.0
HKD3_k127_6086106_2 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000006475 166.0
HKD3_k127_6086106_3 bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding K07114 - - 0.000000000000000000004837 100.0
HKD3_k127_6086106_4 PFAM beta-lactamase domain protein - - - 0.00000000000003038 74.0
HKD3_k127_6086106_5 SpoVT / AbrB like domain K07172 - - 0.0000000000002026 73.0
HKD3_k127_6086633_0 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002659 501.0
HKD3_k127_6086633_1 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007212 386.0
HKD3_k127_6086633_2 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.000000000000000000000000000005902 124.0
HKD3_k127_6106957_0 xylulokinase activity K00854 - 2.7.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006942 514.0
HKD3_k127_6106957_1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002513 437.0
HKD3_k127_6106957_2 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001906 434.0
HKD3_k127_6106957_3 import. Responsible for energy coupling to the transport system K10441,K10542 - 3.6.3.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003184 386.0
HKD3_k127_6106957_4 KDPG and KHG aldolase K01625 - 4.1.2.14,4.1.3.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003181 273.0
HKD3_k127_6106957_5 Glucose-6-phosphate isomerase (GPI) K06859 - 5.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000004786 244.0
HKD3_k127_6106957_6 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 - 4.1.2.4 0.0000000000000000000000000000000000000000000000000000000000002188 218.0
HKD3_k127_6106957_7 Branched-chain amino acid transport system / permease component K10440 - - 0.000000000000000000000000000000000000000001195 169.0
HKD3_k127_6117181_0 PFAM cell divisionFtsK SpoIIIE K03466 - - 3.76e-220 709.0
HKD3_k127_6117181_1 metallopeptidase activity K03568 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009917 540.0
HKD3_k127_6117181_10 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005126 307.0
HKD3_k127_6117181_11 metallopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003871 299.0
HKD3_k127_6117181_12 PFAM GCN5-related N-acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000001198 237.0
HKD3_k127_6117181_13 Acetyltransferases, including N-acetylases of ribosomal proteins - - - 0.0000000000000000000000000000000000000000000005939 172.0
HKD3_k127_6117181_14 - - - - 0.0000000000000000000000000000000000000000000008522 181.0
HKD3_k127_6117181_15 LysM domain - - - 0.000000000000000000000000000000000000000001113 166.0
HKD3_k127_6117181_16 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000001737 147.0
HKD3_k127_6117181_17 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000002661 133.0
HKD3_k127_6117181_18 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000003381 133.0
HKD3_k127_6117181_19 acetyltransferase K00621 - 2.3.1.4 0.00000000000000000000000000000005714 137.0
HKD3_k127_6117181_2 PFAM ABC transporter related K06158 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 537.0
HKD3_k127_6117181_20 - - - - 0.0000000000000000000000000009764 117.0
HKD3_k127_6117181_21 Protein of unknown function (DUF1684) K09164 - - 0.00000000000000000000000002129 110.0
HKD3_k127_6117181_3 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA K00784 - 3.1.26.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006035 449.0
HKD3_k127_6117181_4 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 428.0
HKD3_k127_6117181_5 PFAM oxidoreductase, molybdopterin binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 336.0
HKD3_k127_6117181_6 Belongs to the UPF0173 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000579 316.0
HKD3_k127_6117181_7 PFAM ABC-2 type transporter K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004806 311.0
HKD3_k127_6117181_8 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005872 309.0
HKD3_k127_6117181_9 amino acid activation for nonribosomal peptide biosynthetic process K14379 - 3.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004869 311.0
HKD3_k127_6119148_0 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001632 515.0
HKD3_k127_6119148_1 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005562 394.0
HKD3_k127_6119148_10 virion core protein (lumpy skin disease virus) - - - 0.000008035 57.0
HKD3_k127_6119148_2 ABC 3 transport family K09816,K09819 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005227 356.0
HKD3_k127_6119148_3 Zinc-uptake complex component A periplasmic K02077 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004064 308.0
HKD3_k127_6119148_4 ABC transporter K09817 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005379 291.0
HKD3_k127_6119148_5 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000114 183.0
HKD3_k127_6119148_6 DNA-binding transcription factor activity K03892 - - 0.000000000000000000000000001257 115.0
HKD3_k127_6119148_7 antibiotic catabolic process - - - 0.00000000000000002431 95.0
HKD3_k127_6119148_8 - - - - 0.0000000000004818 70.0
HKD3_k127_6123598_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 2.04e-213 669.0
HKD3_k127_6123598_1 PFAM Amidohydrolase 3 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 566.0
HKD3_k127_6123598_10 TIGRFAM glutaredoxin-like domain protein - - - 0.00000000000000000000000000000006436 130.0
HKD3_k127_6123598_11 Putative neutral zinc metallopeptidase K06973 - - 0.00000000000000000000000000001376 121.0
HKD3_k127_6123598_12 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000006866 124.0
HKD3_k127_6123598_13 Protein tyrosine kinase K12132 - 2.7.11.1 0.0000000000000000000000003051 118.0
HKD3_k127_6123598_14 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.000000000000000000001377 98.0
HKD3_k127_6123598_15 Ribosomal protein L34 K02914 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000009751 93.0
HKD3_k127_6123598_16 TIGRFAM glutaredoxin-like domain protein - - - 0.0000000000000000003202 88.0
HKD3_k127_6123598_17 Peptidoglycan-binding LysM - - - 0.0000000000000000005795 92.0
HKD3_k127_6123598_18 Sortase family K07284 - 3.4.22.70 0.0000006142 62.0
HKD3_k127_6123598_2 PFAM Cobyrinic acid a,c-diamide synthase K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 358.0
HKD3_k127_6123598_3 PFAM PfkB domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004086 357.0
HKD3_k127_6123598_4 Belongs to the ParB family K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002471 303.0
HKD3_k127_6123598_5 lysyltransferase activity K07027 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004356 291.0
HKD3_k127_6123598_6 PFAM 60 kDa inner membrane insertion protein K03217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000371 269.0
HKD3_k127_6123598_7 PFAM single-stranded nucleic acid binding R3H domain protein K06346 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005577 257.0
HKD3_k127_6123598_8 PFAM OsmC family protein K07397 - - 0.0000000000000000000000000000000000000000000000001201 182.0
HKD3_k127_6123598_9 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000000000000000000000000000004473 155.0
HKD3_k127_6125842_0 Peptidase family M28 K13049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 335.0
HKD3_k127_6125842_1 ThiS family - - - 0.0002036 47.0
HKD3_k127_6126602_0 PFAM NHL repeat containing protein - - - 1.334e-203 647.0
HKD3_k127_6126602_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009825 577.0
HKD3_k127_6126602_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003651 485.0
HKD3_k127_6126602_3 Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) K01823 - 5.3.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003975 418.0
HKD3_k127_6126602_4 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002181 407.0
HKD3_k127_6126602_5 LysM domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 335.0
HKD3_k127_6126602_6 Belongs to the FPP GGPP synthase family K13787 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002437 325.0
HKD3_k127_6126602_7 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.000000000000000000000001448 103.0
HKD3_k127_6126602_8 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.000000000000000000001171 97.0
HKD3_k127_6129742_0 Peptidoglycan-binding domain 1 protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002793 344.0
HKD3_k127_6129742_1 dihydrofolate reductase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007451 331.0
HKD3_k127_6129742_2 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 342.0
HKD3_k127_6129742_3 TIGRFAM cell envelope-related function transcriptional attenuator, LytR CpsA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003716 250.0
HKD3_k127_6129742_4 polysaccharide deacetylase K01406 - 3.4.24.40 0.0000000000000000000000000000000000000000000000009957 190.0
HKD3_k127_6129742_5 Zinc metalloprotease (Elastase) K01186,K05994,K21449 - 3.2.1.18,3.4.11.10 0.00000000000000000000000000000000001332 153.0
HKD3_k127_6129742_7 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.000000000000000000000000009787 124.0
HKD3_k127_6129742_8 Septum formation initiator - - - 0.00000000000001725 78.0
HKD3_k127_6133774_0 carbon starvation protein CstA K06200 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008056 525.0
HKD3_k127_6133774_1 Anion-transporting ATPase K01551 - 3.6.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004073 492.0
HKD3_k127_6133774_10 Tetratricopeptide repeat - - - 0.00005887 53.0
HKD3_k127_6133774_11 ABC-2 type transporter K01992 - - 0.0001327 53.0
HKD3_k127_6133774_2 Anion-transporting ATPase K01551 - 3.6.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002177 434.0
HKD3_k127_6133774_3 PFAM ABC transporter related K01990,K16907 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002624 276.0
HKD3_k127_6133774_4 Inosine-uridine preferring nucleoside hydrolase K01239,K01250 - 3.2.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000842 261.0
HKD3_k127_6133774_5 tungstate ion transport K01990,K07705,K10112 - - 0.000000000000000000000000000000000000000000000000000000000000000005557 237.0
HKD3_k127_6133774_6 - - - - 0.00000000000000000000000000000000000001424 145.0
HKD3_k127_6133774_8 - - - - 0.0000000000000000000008901 98.0
HKD3_k127_6133774_9 ABC-2 family transporter protein K01992 - - 0.000000002825 68.0
HKD3_k127_6138072_0 fructose 1,6-bisphosphate 1-phosphatase activity K03841 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005984,GO:0005985,GO:0005986,GO:0005996,GO:0006000,GO:0006002,GO:0006006,GO:0006094,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009311,GO:0009312,GO:0009987,GO:0016043,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0019318,GO:0019319,GO:0019637,GO:0022607,GO:0030388,GO:0034637,GO:0042132,GO:0042578,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046351,GO:0046364,GO:0050308,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:1901135,GO:1901576 3.1.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008389 480.0
HKD3_k127_6138072_1 Aconitase family (aconitate hydratase) K01681 - 4.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004382 331.0
HKD3_k127_6138072_2 methyltransferase K21459 - 2.1.1.301 0.000000000000000000000000000000000000000000000000000000000000000000000000003407 264.0
HKD3_k127_6138072_4 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.000000000000000000000000000000000000000000000000000000001153 211.0
HKD3_k127_6156300_0 carbohydrate binding K00702 - 2.4.1.20 0.0 1210.0
HKD3_k127_6156300_1 glycoside hydrolase family 2 sugar binding K01192 - 3.2.1.25 0.0 1022.0
HKD3_k127_6156300_10 Oligopeptide/dipeptide transporter, C-terminal region K02032 - - 0.000000000000000000000000000000000000000000000000000000000001622 209.0
HKD3_k127_6156300_11 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000003597 206.0
HKD3_k127_6156300_12 PFAM DinB family protein - - - 0.000000000000000000000000000000000000000000000000000000000463 207.0
HKD3_k127_6156300_13 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase K03660 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000008631 211.0
HKD3_k127_6156300_14 Transposase - - - 0.000000000000000000000000000000000000000000000002327 178.0
HKD3_k127_6156300_15 COG0784 FOG CheY-like receiver - - - 0.00000000000000000000000000000000000000000000003001 174.0
HKD3_k127_6156300_16 Protein of unknown function (DUF1641) - - - 0.00000000000000000000000000000000000000000000601 172.0
HKD3_k127_6156300_17 DsrC like protein K11179 - - 0.00000000000000000000000000000000000000000002767 162.0
HKD3_k127_6156300_18 Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source K01483 - 4.3.2.3 0.0000000000000000000000000000000004583 135.0
HKD3_k127_6156300_19 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.000000000000000000000000000009605 124.0
HKD3_k127_6156300_2 Fibronectin type III-like domain K05349 - 3.2.1.21 0.0 1011.0
HKD3_k127_6156300_20 - - - - 0.00000000000000000000000001761 116.0
HKD3_k127_6156300_3 Carboxypeptidase Taq (M32) metallopeptidase K01299 - 3.4.17.19 2.198e-224 704.0
HKD3_k127_6156300_4 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 1.522e-196 619.0
HKD3_k127_6156300_5 exo-alpha-(2->6)-sialidase activity K20276 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005569 581.0
HKD3_k127_6156300_6 GAF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003864 311.0
HKD3_k127_6156300_7 DsrE/DsrF/DrsH-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007827 264.0
HKD3_k127_6156300_8 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000006378 229.0
HKD3_k127_6156300_9 Response regulator receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000005419 229.0
HKD3_k127_6179608_0 2-methylcitrate dehydratase K01720 - 4.2.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006072 586.0
HKD3_k127_6179608_1 (2R)-phospho-3-sulfolactate synthase (ComA) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000473 449.0
HKD3_k127_6179608_2 integral membrane protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002532 337.0
HKD3_k127_6179608_3 Short-chain dehydrogenase reductase SDR K03793 - 1.5.1.33 0.00000000000000000000000000000000000000000000000003004 187.0
HKD3_k127_6179608_4 Protein of unknown function (DUF1295) - - - 0.0000000000000000000000000000001016 134.0
HKD3_k127_6179608_5 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.000000000000001298 83.0
HKD3_k127_6179608_6 MFS_1 like family K11367 - 3.6.4.12 0.000000007641 63.0
HKD3_k127_6204115_0 FAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 357.0
HKD3_k127_6204115_1 organic phosphonate transmembrane transporter activity K02042 - - 0.000000000000000000000000000000000000000000000000000000000000000000008524 247.0
HKD3_k127_6204115_2 ABC transporter (Permease) K02042 - - 0.00000000000000000000000000000000000000000000000000000000000000000003817 244.0
HKD3_k127_6204115_3 FMN binding - - - 0.00000000000000000000000000000000000001437 150.0
HKD3_k127_6204115_4 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000000000003521 137.0
HKD3_k127_6204115_5 Transcriptional regulator - - - 0.0000000000000000000006194 97.0
HKD3_k127_6227899_0 histidine kinase HAMP region domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007786 426.0
HKD3_k127_6227899_1 fad dependent oxidoreductase K07222 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002814 327.0
HKD3_k127_6227899_2 Two component transcriptional regulator, winged helix family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000157 297.0
HKD3_k127_6250778_0 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004383 567.0
HKD3_k127_6250778_1 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005933 375.0
HKD3_k127_6250778_2 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002291 347.0
HKD3_k127_6250778_3 Catalyzes the reversible phosphorylation of UMP to UDP K09903 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009677 342.0
HKD3_k127_6250778_4 ABC transporter K02006 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 312.0
HKD3_k127_6250778_5 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004452 276.0
HKD3_k127_6250778_6 Belongs to the CDS family K00981 - 2.7.7.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000001124 269.0
HKD3_k127_6250778_7 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005307 254.0
HKD3_k127_6250778_8 Carbohydrate family 9 binding domain-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000007939 240.0
HKD3_k127_6250778_9 TIGRFAM cobalt ABC transporter, inner membrane subunit CbiQ K02008 - - 0.00000000000000000000002505 102.0
HKD3_k127_6266039_0 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 8.569e-212 674.0
HKD3_k127_6266039_1 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639 - 2.3.1.29 5.46e-208 651.0
HKD3_k127_6266039_10 Bacterial protein of unknown function (DUF951) - - - 0.0000000000000000000000007017 106.0
HKD3_k127_6266039_11 PFAM HD domain - - - 0.000000000000001362 84.0
HKD3_k127_6266039_2 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033,K12369 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 426.0
HKD3_k127_6266039_3 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002795 406.0
HKD3_k127_6266039_4 EDD domain protein, DegV family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000267 278.0
HKD3_k127_6266039_5 PFAM Monogalactosyldiacylglycerol synthase K03429 - 2.4.1.315 0.000000000000000000000000000000000000000000000000000000000000000000000000000009928 267.0
HKD3_k127_6266039_6 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001414 281.0
HKD3_k127_6266039_7 Prephenate dehydrogenase K04517 - 1.3.1.12 0.00000000000000000000000000000000000000000000000000000000000001343 227.0
HKD3_k127_6266039_8 Peptidase M50 - - - 0.00000000000000000000000000000000000000000000000000000000000006281 222.0
HKD3_k127_6267505_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.0 1128.0
HKD3_k127_6267505_1 TIGRFAM isocitrate dehydrogenase, NADP-dependent K00031 - 1.1.1.42 1.494e-223 699.0
HKD3_k127_6267505_10 Hydrogenase maturation protease - - - 0.000000000000000005225 90.0
HKD3_k127_6267505_2 Nickel-dependent hydrogenase K00436 - 1.12.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001948 481.0
HKD3_k127_6267505_3 4Fe-4S dicluster domain K16950 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002241 354.0
HKD3_k127_6267505_4 coenzyme F420 hydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006129 309.0
HKD3_k127_6267505_5 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009076 293.0
HKD3_k127_6267505_6 NurA - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002339 252.0
HKD3_k127_6267505_7 Helicase conserved C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000005264 235.0
HKD3_k127_6267505_9 cyclic nucleotide binding K10914 - - 0.000000000000000000000000002866 118.0
HKD3_k127_6282649_0 ATPase associated with various cellular activities, AAA_5 K03696 - - 0.0 1095.0
HKD3_k127_6282649_1 ABC transporter, transmembrane region K06147 - - 4.204e-270 844.0
HKD3_k127_6282649_10 iron-sulfur cluster assembly - - - 0.0000000000000000000000000001804 115.0
HKD3_k127_6282649_11 DNA-binding transcription factor activity - - - 0.0000000000000000005266 93.0
HKD3_k127_6282649_12 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0040007,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 0.000000000000005759 76.0
HKD3_k127_6282649_13 Domain of unknown function (DUF4870) K09940 - - 0.00005935 52.0
HKD3_k127_6282649_2 ABC-type multidrug transport system ATPase and permease K06147 - - 1.147e-246 783.0
HKD3_k127_6282649_3 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756,K01857 - 4.3.2.2,5.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001816 559.0
HKD3_k127_6282649_4 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002241 389.0
HKD3_k127_6282649_5 PFAM peptidase S1 and S6, chymotrypsin Hap K08070 - 1.3.1.74 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003887 288.0
HKD3_k127_6282649_6 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000002101 238.0
HKD3_k127_6282649_7 PFAM GCN5-related N-acetyltransferase - - - 0.000000000000000000000000000000000000000000000000004459 186.0
HKD3_k127_6282649_8 Transposase IS200 like - - - 0.0000000000000000000000000000000000000000000000002596 183.0
HKD3_k127_6282649_9 cyclic nucleotide binding K10914 - - 0.00000000000000000000000000003511 122.0
HKD3_k127_6292261_0 Glycine radical enzyme that catalyzes the cleavage of a C-N bond in choline, producing trimethylamine (TMA) and acetaldehyde K00656,K20038 - 2.3.1.54,4.3.99.4 0.0 1136.0
HKD3_k127_6296650_0 Xylose isomerase-like TIM barrel - - - 0.00000000000000000000000000000000000000000000000000001481 198.0
HKD3_k127_6296650_1 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000004127 197.0
HKD3_k127_6296650_2 Aminoacyl-tRNA editing domain K03976 - - 0.0000000000000000000000000000000000000000000000000004587 188.0
HKD3_k127_6296650_3 histidine kinase HAMP region domain protein K07642 - 2.7.13.3 0.0000000000000000000000000000000002315 137.0
HKD3_k127_6310535_0 Maltogenic Amylase, C-terminal domain K05343 - 3.2.1.1,5.4.99.16 5.229e-229 720.0
HKD3_k127_6310535_1 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002098 522.0
HKD3_k127_6310535_2 PFAM zinc iron permease K07238 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002192 347.0
HKD3_k127_6310535_3 PFAM binding-protein-dependent transport systems inner membrane component K10234 - - 0.00000000000000000000000000000000000000000000000000000000000000000001169 237.0
HKD3_k127_6310535_4 C-terminal domain of CHU protein family - - - 0.000000000000000000000000000000000001332 157.0
HKD3_k127_6310535_5 Protein of unknown function (DUF402) - - - 0.0000000000000000000000000000000002862 139.0
HKD3_k127_6310535_6 cell adhesion involved in biofilm formation - - - 0.00000000000000000000000000005214 133.0
HKD3_k127_6310535_7 cellulose binding - - - 0.00000000000002502 86.0
HKD3_k127_6310535_8 Scavenger mRNA decapping enzyme C-term binding K02503 - - 0.000000000004048 67.0
HKD3_k127_6310535_9 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.0000000001797 69.0
HKD3_k127_6319587_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 7.512e-209 657.0
HKD3_k127_6319587_1 PFAM VanW family protein - - - 2.977e-202 647.0
HKD3_k127_6319587_10 Putative auto-transporter adhesin, head GIN domain - - - 0.00000000000000000000000004413 117.0
HKD3_k127_6319587_11 tetraacyldisaccharide 4'-kinase activity K09791 - - 0.00000000000000000000000005679 108.0
HKD3_k127_6319587_12 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000005789 70.0
HKD3_k127_6319587_13 PBS lyase HEAT-like repeat - - - 0.00000008364 62.0
HKD3_k127_6319587_14 PFAM Cys Met metabolism pyridoxal-phosphate-dependent protein K01739,K01761 - 2.5.1.48,4.4.1.11 0.000009705 49.0
HKD3_k127_6319587_2 glutamine-fructose-6-phosphate transaminase (isomerizing) activity K00820,K15916 - 2.6.1.16,5.3.1.8,5.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 387.0
HKD3_k127_6319587_3 PFAM purine or other phosphorylase family 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002164 344.0
HKD3_k127_6319587_4 oxidoreductase activity, acting on CH-OH group of donors - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000207 320.0
HKD3_k127_6319587_5 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003651 310.0
HKD3_k127_6319587_6 Methyltransferase type 11 K07755 - 2.1.1.137 0.0000000000000000000000000000000000000000000000000000000000000000000001263 249.0
HKD3_k127_6319587_7 Glycosyltransferase 28 domain K03715 - 2.4.1.46 0.00000000000000000000000000000000000000000000000000000000000000001507 228.0
HKD3_k127_6319587_8 Ig-like domain from next to BRCA1 gene K13276 - - 0.00000000000000000000000000000000000000000000001369 185.0
HKD3_k127_6319587_9 Protein of unknown function (DUF456) K09793 - - 0.000000000000000000000000000000000006783 141.0
HKD3_k127_6362640_0 involved in signal transduction (via phosphorylation) involved in transcriptional regulatory mechanism and in the regulation of secondary metabolites catalytic activity ATP a protein ADP a phosphoprotein K08282 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000326 397.0
HKD3_k127_6362640_1 oxidoreductase activity - - - 0.00000000000000000001622 109.0
HKD3_k127_6362640_2 Subtilase family - - - 0.0000000000005486 84.0
HKD3_k127_6376343_0 PFAM Xylose isomerase domain protein TIM barrel K01805 - 5.3.1.5 3.521e-215 672.0
HKD3_k127_6376343_1 Fibronectin type III-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001957 552.0
HKD3_k127_6385596_0 PFAM cytochrome c oxidase, subunit III K02276,K02299 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000006279 265.0
HKD3_k127_6385596_1 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000001241 218.0
HKD3_k127_6385596_2 mitochondrial respiratory chain complex IV assembly K14998 GO:0005575,GO:0005618,GO:0005623,GO:0008150,GO:0030312,GO:0040007,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044403,GO:0044419,GO:0044464,GO:0051704,GO:0071944 - 0.000000000000000000000000000000000000002538 156.0
HKD3_k127_6385596_3 SCO1/SenC K03619,K07152 GO:0003674,GO:0005048,GO:0005488,GO:0033218,GO:0042277 - 0.0000000000000000000000000000000000003536 153.0
HKD3_k127_6386855_0 PFAM CheR methyltransferase, SAM binding domain K00575,K13924 - 2.1.1.80,3.1.1.61 1.888e-224 711.0
HKD3_k127_6386855_1 3'-5' exonuclease K03684 - 3.1.13.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 305.0
HKD3_k127_6386855_2 PFAM CheB methylesterase K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001132 274.0
HKD3_k127_6386855_3 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000002585 259.0
HKD3_k127_6386855_4 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000001226 218.0
HKD3_k127_6386855_5 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000313 204.0
HKD3_k127_6386855_6 PFAM ATP-binding region, ATPase domain protein K02486 - 2.7.13.3 0.000000000000000000000000000000000000000000000005227 197.0
HKD3_k127_6386855_7 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000005569 136.0
HKD3_k127_6386855_8 Two component transcriptional regulator, winged helix family - - - 0.000000000000000000000277 101.0
HKD3_k127_6387868_0 transferase activity, transferring acyl groups K15520 - 2.3.1.189 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008264 306.0
HKD3_k127_6387868_1 PFAM GCN5-related N-acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003112 308.0
HKD3_k127_6387868_2 - - - - 0.000000000000000000000000000000000000000000000004678 184.0
HKD3_k127_6387868_3 Acetyltransferase (GNAT) domain K03790 - 2.3.1.128 0.000000000000000000000000000001829 127.0
HKD3_k127_6387868_4 Fad linked oxidase - - - 0.00000000000000000000000003693 111.0
HKD3_k127_6387868_5 beta-lactamase - - - 0.00000000000000000000000007464 112.0
HKD3_k127_6390646_0 PFAM cytochrome bd ubiquinol oxidase subunit I K00425 - 1.10.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003131 543.0
HKD3_k127_6393786_0 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000708 302.0
HKD3_k127_6393786_1 A G-specific K03575 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004214 247.0
HKD3_k127_6393786_2 - - - - 0.000000000000000000000000000000003206 130.0
HKD3_k127_6393786_3 chromate transporter K07240 - - 0.000000000000000000000000000005357 126.0
HKD3_k127_639806_0 histone H2A K63-linked ubiquitination - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003281 272.0
HKD3_k127_639806_1 SMART protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000004338 192.0
HKD3_k127_639806_2 Planctomycete cytochrome C - - - 0.000001607 55.0
HKD3_k127_643459_0 PFAM Radical SAM domain protein K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 504.0
HKD3_k127_643459_1 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003261 343.0
HKD3_k127_6436024_0 Zinc-binding dehydrogenase K22231 - - 2.715e-195 614.0
HKD3_k127_6436024_1 creatininase K01470 - 3.5.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001663 514.0
HKD3_k127_6436024_2 inositol 2-dehydrogenase activity K00010 - 1.1.1.18,1.1.1.369 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002551 322.0
HKD3_k127_6436024_3 Catalyzes the NAD( )-dependent oxidation of L-threonine to 2-amino-3-ketobutyrate - - - 0.00000005233 59.0
HKD3_k127_6436024_4 TIM barrel - - - 0.0005123 43.0
HKD3_k127_6453404_0 Belongs to the DegT DnrJ EryC1 family K13010 - 2.6.1.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007153 526.0
HKD3_k127_6453404_1 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006995 438.0
HKD3_k127_6453404_10 PFAM response regulator receiver K02483,K07658,K07668 - - 0.0000000000000000003711 92.0
HKD3_k127_6453404_2 Belongs to the MenA family. Type 1 subfamily K02548 - 2.5.1.74 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003637 412.0
HKD3_k127_6453404_3 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K02484,K07642 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007798 391.0
HKD3_k127_6453404_4 PFAM deoxynucleoside kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004975 327.0
HKD3_k127_6453404_5 Two component transcriptional regulator, winged helix family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002203 325.0
HKD3_k127_6453404_6 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001737 306.0
HKD3_k127_6453404_7 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004102 286.0
HKD3_k127_6453404_8 Ig-like domain from next to BRCA1 gene - - - 0.00000000000000000000000000000000003996 149.0
HKD3_k127_6453404_9 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.00000000000000000000000001681 124.0
HKD3_k127_6486822_0 PFAM NADH flavin oxidoreductase NADH oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 571.0
HKD3_k127_6486822_1 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000049 478.0
HKD3_k127_6486822_2 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000002011 118.0
HKD3_k127_6486822_4 serine threonine protein kinase - - - 0.000000000000001312 86.0
HKD3_k127_6486822_5 SnoaL-like domain - - - 0.000008518 54.0
HKD3_k127_6494012_0 Glycyl-tRNA synthetase alpha subunit K14164 - 6.1.1.14 0.0 1125.0
HKD3_k127_6494012_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002752 568.0
HKD3_k127_6494012_10 acetyltransferase K03789 - 2.3.1.128 0.0000001635 57.0
HKD3_k127_6494012_2 PFAM band 7 protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007296 458.0
HKD3_k127_6494012_3 NAD synthase K01916 - 6.3.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001523 430.0
HKD3_k127_6494012_4 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002353 399.0
HKD3_k127_6494012_5 Transmembrane secretion effector K08225 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001466 371.0
HKD3_k127_6494012_6 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease - - - 0.00000000000000000000000000000000000000000000000007052 184.0
HKD3_k127_6494012_7 - K07403 - - 0.0000000000000000000000000000000000000000000001086 175.0
HKD3_k127_6494012_8 lipoprotein biosynthetic process K13292 - - 0.000000000000000000000000000000001239 139.0
HKD3_k127_6494012_9 Domain of unknown function (DUF3786) - - - 0.00000000000000000001597 100.0
HKD3_k127_6494954_0 - K07138 - - 3.878e-200 628.0
HKD3_k127_6494954_1 ATPases associated with a variety of cellular activities K16786,K16787 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007553 601.0
HKD3_k127_6494954_10 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.0000000000000000000000000000000000000007662 160.0
HKD3_k127_6494954_11 - - - - 0.000000001632 68.0
HKD3_k127_6494954_12 PFAM Formylglycine-generating sulfatase enzyme K18912,K20333 - 1.14.99.50 0.000001357 52.0
HKD3_k127_6494954_13 Sulfatase-modifying factor enzyme 1 - - - 0.00001675 50.0
HKD3_k127_6494954_14 Carotenoid biosynthesis protein - - - 0.0003834 46.0
HKD3_k127_6494954_2 PFAM GGDEF domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 617.0
HKD3_k127_6494954_3 Fumarate hydratase (Fumerase) K01676,K01677 - 4.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 431.0
HKD3_k127_6494954_4 Fumarase C-terminus K01676,K01678 - 4.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 325.0
HKD3_k127_6494954_5 ROK family K00886 - 2.7.1.63 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004621 302.0
HKD3_k127_6494954_6 PFAM Major Facilitator Superfamily K08223 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 304.0
HKD3_k127_6494954_7 creatininase K01470 - 3.5.2.10 0.00000000000000000000000000000000000000000000000000000000007226 214.0
HKD3_k127_6494954_8 CYTH domain - - - 0.00000000000000000000000000000000000000000000000000002237 192.0
HKD3_k127_6494954_9 NUDIX domain - - - 0.0000000000000000000000000000000000000000000467 164.0
HKD3_k127_6499966_0 Trimethylamine methyltransferase (MTTB) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001754 347.0
HKD3_k127_6499966_1 Methionine synthase B12-binding module cap domain protein K00548,K14084 - 2.1.1.13 0.00000000000000000000000000000000000000000000000000000000001247 215.0
HKD3_k127_6499966_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000006909 137.0
HKD3_k127_6499966_3 Transcriptional regulator, GntR family - - - 0.0000000000000000007441 96.0
HKD3_k127_6499966_4 Transcriptional regulator - - - 0.000000000002087 76.0
HKD3_k127_6499966_5 PFAM trimethylamine methyltransferase K14083 - 2.1.1.250 0.00004456 48.0
HKD3_k127_6548938_0 cellulose binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003681 316.0
HKD3_k127_6548938_1 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000005005 271.0
HKD3_k127_6548938_2 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin - - - 0.000000000000000000000000000001199 123.0
HKD3_k127_6548938_3 cysteine-type peptidase activity - - - 0.00000000000001396 87.0
HKD3_k127_6548938_4 trisaccharide binding K03556 - - 0.0005948 42.0
HKD3_k127_6629069_0 CoA binding domain K01905,K22224 - 6.2.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004528 589.0
HKD3_k127_6629069_1 helix_turn_helix, Lux Regulon K03556 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004797 530.0
HKD3_k127_6629069_2 PFAM ABC transporter related K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004553 368.0
HKD3_k127_6629069_3 ABC-type multidrug transport system, permease component K01992 - - 0.0000000000000000000000000000000000000000000001817 183.0
HKD3_k127_6629069_4 O-methyltransferase activity K00543,K13169 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008172,GO:0008757,GO:0009058,GO:0009059,GO:0009308,GO:0009309,GO:0009987,GO:0010467,GO:0010817,GO:0016740,GO:0016741,GO:0017096,GO:0017144,GO:0018130,GO:0019438,GO:0019538,GO:0030186,GO:0030187,GO:0032259,GO:0034641,GO:0034645,GO:0034754,GO:0042401,GO:0042430,GO:0042435,GO:0042445,GO:0042446,GO:0042802,GO:0042803,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046219,GO:0046483,GO:0046983,GO:0048519,GO:0050789,GO:0050793,GO:0051093,GO:0051239,GO:0051241,GO:0065007,GO:0065008,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1905939,GO:1905940,GO:2000018,GO:2000019,GO:2000026,GO:2000241,GO:2000242 2.1.1.4 0.00000000000000000000000008844 119.0
HKD3_k127_6629069_5 Transport permease protein K01992 - - 0.000000000000000001893 98.0
HKD3_k127_6629069_6 - - - - 0.000000000167 64.0
HKD3_k127_6629069_7 - - - - 0.0007044 46.0
HKD3_k127_6631425_0 PFAM tRNA synthetase class II (G H P and S) K01892 - 6.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006622 502.0
HKD3_k127_6631425_1 exodeoxyribonuclease III K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009599 307.0
HKD3_k127_6631425_2 PFAM Uncharacterised protein, DegV family COG1307 - - - 0.000000000000000000000000000000000000000000000000000002023 201.0
HKD3_k127_6631425_3 TIGRFAM fructose-6-phosphate aldolase, TalC MipB family K00616 - 2.2.1.2 0.000000000000000000000000000000000000000000003717 171.0
HKD3_k127_6631425_4 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway K00852 - 2.7.1.15 0.0000000000000000000000002525 109.0
HKD3_k127_66837_0 May be involved in recombinational repair of damaged DNA K03631 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001763 613.0
HKD3_k127_66837_1 PFAM glycosyl transferase, family 51 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004003 593.0
HKD3_k127_66837_10 PFAM Translin K07477 - - 0.0000000000000000000000000000000000000000000000000000000000000000001349 237.0
HKD3_k127_66837_11 PFAM sigma-70 region 2 domain protein K03088 - - 0.00000000000000000000000000000000000000000000000000000000001606 212.0
HKD3_k127_66837_12 Nudix hydrolase - - - 0.000000000000000000000000000000000000000000000007403 177.0
HKD3_k127_66837_13 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.00000000000000000000000000000000000000000000001822 175.0
HKD3_k127_66837_14 Type IV pilus biogenesis stability protein PilW - - - 0.00000000000000000000000000000000000000002652 158.0
HKD3_k127_66837_15 - - - - 0.0000000000000000000000000000000000000003415 158.0
HKD3_k127_66837_16 Domain of unknown function DUF83 K07464 - 3.1.12.1 0.0000000000000000000000000000000001317 138.0
HKD3_k127_66837_17 Trypsin K04771 - 3.4.21.107 0.000000000000000000000001276 113.0
HKD3_k127_66837_18 Protein of unknown function (DUF3467) - - - 0.000000000000001074 80.0
HKD3_k127_66837_2 Polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002375 500.0
HKD3_k127_66837_21 AntiSigma factor - - - 0.0001502 53.0
HKD3_k127_66837_3 Trypsin K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 494.0
HKD3_k127_66837_4 Uncharacterized protein conserved in bacteria (DUF2179) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007468 357.0
HKD3_k127_66837_5 2-hydroxy-3-oxopropionate reductase K00042 - 1.1.1.60 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000274 352.0
HKD3_k127_66837_6 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008843 320.0
HKD3_k127_66837_7 Belongs to the peptidase S51 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008809 321.0
HKD3_k127_66837_8 sigma-70 region 2 domain protein K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003685 271.0
HKD3_k127_66837_9 DNA methylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000111 240.0
HKD3_k127_6690650_0 histidine kinase HAMP region domain protein K07642 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008584 418.0
HKD3_k127_6690650_1 PFAM peptidase S1 and S6, chymotrypsin Hap K04771,K08070 - 1.3.1.74,3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000257 359.0
HKD3_k127_6690650_2 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006992 322.0
HKD3_k127_6690650_3 Two component transcriptional regulator, winged helix family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007084 289.0
HKD3_k127_6690650_4 NUDIX hydrolase - - - 0.00000000000000000000000000000000000000000000000000003367 191.0
HKD3_k127_674543_0 Belongs to the glycosyl hydrolase 2 family - - - 1.156e-198 635.0
HKD3_k127_674543_1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K03336 - 3.7.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 616.0
HKD3_k127_674543_2 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001103 281.0
HKD3_k127_674543_3 MFS/sugar transport protein K03292 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001119 283.0
HKD3_k127_674543_4 COG1233 Phytoene dehydrogenase and related proteins K09516 - 1.3.99.23 0.00000000000000000000000000000000000003964 161.0
HKD3_k127_6795083_0 TIGRFAM MazG family protein K02499 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009098 569.0
HKD3_k127_6795083_1 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003807 542.0
HKD3_k127_6795083_10 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004807 275.0
HKD3_k127_6795083_11 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000002701 250.0
HKD3_k127_6795083_12 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000004475 256.0
HKD3_k127_6795083_13 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000000000000004605 242.0
HKD3_k127_6795083_14 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000002543 228.0
HKD3_k127_6795083_15 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000004257 213.0
HKD3_k127_6795083_16 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000183 211.0
HKD3_k127_6795083_17 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000003232 201.0
HKD3_k127_6795083_18 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000001093 192.0
HKD3_k127_6795083_19 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.00000000000000000000000000000000000000000000000001227 182.0
HKD3_k127_6795083_2 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003252 492.0
HKD3_k127_6795083_20 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000000000000002128 183.0
HKD3_k127_6795083_21 Binds to the 23S rRNA K02876 - - 0.0000000000000000000000000000000000000000000000003329 179.0
HKD3_k127_6795083_22 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.000000000000000000000000000000000000000000000001535 176.0
HKD3_k127_6795083_23 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.000000000000000000000000000000000000000000001266 166.0
HKD3_k127_6795083_24 Ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000002846 158.0
HKD3_k127_6795083_25 One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000003329 156.0
HKD3_k127_6795083_26 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.000000000000000000000000000000000000005819 149.0
HKD3_k127_6795083_27 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000003228 145.0
HKD3_k127_6795083_28 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.000000000000000000000000000000002337 131.0
HKD3_k127_6795083_29 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.0000000000000000000000000000282 119.0
HKD3_k127_6795083_3 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 473.0
HKD3_k127_6795083_30 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000245 112.0
HKD3_k127_6795083_31 Raf kinase inhibitor-like protein, YbhB YbcL family K06910 - - 0.0000000000000000000000005109 105.0
HKD3_k127_6795083_32 Ribosomal protein L30 K02907 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000003588 85.0
HKD3_k127_6795083_33 Belongs to the bacterial ribosomal protein bL36 family K02919 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000003635 64.0
HKD3_k127_6795083_34 Belongs to the universal ribosomal protein uL29 family K02904 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000007581 59.0
HKD3_k127_6795083_4 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002816 334.0
HKD3_k127_6795083_5 Enoyl-(Acyl carrier protein) reductase K10780 - 1.3.1.104 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007267 331.0
HKD3_k127_6795083_6 Metallopeptidase family M24 K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009284 312.0
HKD3_k127_6795083_7 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008167 306.0
HKD3_k127_6795083_8 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007782 287.0
HKD3_k127_6795083_9 Forms part of the polypeptide exit tunnel K02926 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004182 275.0
HKD3_k127_6795132_0 Zn-dependent dipeptidase, microsomal dipeptidase K01273 - 3.4.13.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006844 508.0
HKD3_k127_6795132_1 4fe-4S ferredoxin, iron-sulfur binding domain protein K00207,K00219,K00317,K02293,K10797,K12527,K17723 - 1.3.1.1,1.3.1.2,1.3.1.31,1.3.1.34,1.3.5.5,1.5.8.1,1.5.8.2,1.97.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000091 303.0
HKD3_k127_6795132_2 PFAM Vitamin B12 dependent methionine synthase, activation - - - 0.00000000003941 67.0
HKD3_k127_6828738_0 Alpha-amylase domain K01208 - 3.2.1.133,3.2.1.135,3.2.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003002 542.0
HKD3_k127_6828738_1 maltose binding K15770,K15771 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005733 516.0
HKD3_k127_6828738_2 transmembrane transport K15771 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005552 464.0
HKD3_k127_6828738_3 PFAM binding-protein-dependent transport systems inner membrane component K15772 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004505 371.0
HKD3_k127_6828738_4 PFAM dihydrodipicolinate synthetase K01714,K21062 - 3.5.4.22,4.3.3.7 0.0000000000000000000000000000000000000000000000000004665 195.0
HKD3_k127_6828738_5 PFAM ROK family protein - - - 0.000000000000000000000002114 106.0
HKD3_k127_6862321_0 Pyridine nucleotide-disulphide oxidoreductase K03388,K15022 - 1.17.1.10,1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 7.867e-228 736.0
HKD3_k127_6862321_1 4Fe-4S ferredoxin iron-sulfur binding domain protein K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 495.0
HKD3_k127_6862321_10 Part of a membrane complex involved in electron transport - - - 0.0004784 51.0
HKD3_k127_6862321_2 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003416 432.0
HKD3_k127_6862321_3 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002867 297.0
HKD3_k127_6862321_4 2Fe-2S iron-sulfur cluster binding domain K00240 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000732 278.0
HKD3_k127_6862321_5 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001811 278.0
HKD3_k127_6862321_6 SMART helix-turn-helix domain protein K15539 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001031 274.0
HKD3_k127_6862321_7 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000000000000000000000000002928 252.0
HKD3_k127_6862321_8 Binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000006697 199.0
HKD3_k127_6862321_9 PFAM methyl-viologen-reducing hydrogenase delta subunit K14127 - 1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000002282 179.0
HKD3_k127_6879679_0 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000001741 200.0
HKD3_k127_6879679_1 Transposase IS200 like - - - 0.00000000000000000000000000000000000002256 151.0
HKD3_k127_6879679_2 - - - - 0.0000000000000000000000000000000006907 135.0
HKD3_k127_6879679_3 Protein of unknown function (DUF1697) - - - 0.000000000000000000000000000000002519 136.0
HKD3_k127_6879679_4 Domain of unknown function (DU1801) - - - 0.00002116 50.0
HKD3_k127_6886259_0 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003888 463.0
HKD3_k127_6886259_1 acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001707 276.0
HKD3_k127_6886259_2 PFAM pyruvate ferredoxin flavodoxin oxidoreductase K00180 - 1.2.7.8 0.0000000000000000000000000000000000000000000003119 173.0
HKD3_k127_6886259_3 COG2076 Membrane transporters of cations and cationic drugs K03297,K11814 - - 0.00000000000000000000000000000003075 128.0
HKD3_k127_6922760_0 peptidase dimerisation domain protein K01436 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004122 389.0
HKD3_k127_6922760_1 PFAM Trimethylamine methyltransferase (MTTB) K14083 - 2.1.1.250 0.000000000000000000000000000000000000000000000000000000000000000000000000000001324 282.0
HKD3_k127_6922760_2 Trimethylamine methyltransferase (MTTB) K14083 - 2.1.1.250 0.0000000000000000000000000000000000000000000000000000000000184 214.0
HKD3_k127_6922760_3 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.000000000000000000000000000000000000000001704 156.0
HKD3_k127_6953672_0 Elongation factor G C-terminus K06207 GO:0000027,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006996,GO:0008150,GO:0009266,GO:0009408,GO:0009409,GO:0009628,GO:0009987,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0065003,GO:0070925,GO:0071826,GO:0071840 - 5.214e-247 776.0
HKD3_k127_6953672_1 MatE - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002834 425.0
HKD3_k127_6953672_2 transporter K03292 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004177 417.0
HKD3_k127_6953672_3 acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002451 368.0
HKD3_k127_6953672_4 Acyl-transferase - - - 0.0000000000000000000000000000000000000000005544 166.0
HKD3_k127_7033314_0 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 481.0
HKD3_k127_7033314_1 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009586 364.0
HKD3_k127_7033314_2 methyltransferase K21459 - 2.1.1.301 0.0000000000000000000000002084 115.0
HKD3_k127_7252893_0 PFAM peptidase M3A and M3B, thimet oligopeptidase F K08602 - - 2.86e-253 793.0
HKD3_k127_7252893_1 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 4.402e-235 736.0
HKD3_k127_7252893_10 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007079 317.0
HKD3_k127_7252893_11 CBS domain containing protein K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005346 288.0
HKD3_k127_7252893_12 Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis K03816 - 2.4.2.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000048 268.0
HKD3_k127_7252893_13 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004267 270.0
HKD3_k127_7252893_14 - - - - 0.000000000000000000000000000000000000000000000000000000247 205.0
HKD3_k127_7252893_15 PFAM Maf family protein K06287 - - 0.0000000000000000000000000000000000000000000000000000002829 204.0
HKD3_k127_7252893_16 Domain of unknown function (DUF4332) - - - 0.0000000000000000000000000000000000000000000007775 169.0
HKD3_k127_7252893_17 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000005393 151.0
HKD3_k127_7252893_18 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000000003785 142.0
HKD3_k127_7252893_19 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.000000000000000000000000000000002318 133.0
HKD3_k127_7252893_2 NTF2-like N-terminal transpeptidase domain K05515 - 3.4.16.4 3.138e-218 700.0
HKD3_k127_7252893_20 phosphorelay signal transduction system - - - 0.0000000000000000000000001061 120.0
HKD3_k127_7252893_21 This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis K01489 - 3.5.4.5 0.000000000000000000000001946 104.0
HKD3_k127_7252893_22 - - - - 0.000000000002662 68.0
HKD3_k127_7252893_23 - - - - 0.000002557 51.0
HKD3_k127_7252893_3 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002614 554.0
HKD3_k127_7252893_4 Belongs to the ABC transporter superfamily K02032,K10823 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 545.0
HKD3_k127_7252893_5 PFAM extracellular solute-binding protein, family 5 K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 535.0
HKD3_k127_7252893_6 PFAM extracellular solute-binding protein, family 5 K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002777 529.0
HKD3_k127_7252893_7 Belongs to the ABC transporter superfamily K02031 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003711 507.0
HKD3_k127_7252893_8 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 396.0
HKD3_k127_7252893_9 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002657 341.0
HKD3_k127_725702_0 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC - - - 1.255e-276 879.0
HKD3_k127_725702_1 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001717 275.0
HKD3_k127_725702_2 Putative NAD(P)-binding K03499 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001949 262.0
HKD3_k127_725702_3 TrkA-N domain K03499 - - 0.000000000000000000000000000000000000000000000000000000000000001835 224.0
HKD3_k127_725702_4 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000009311 130.0
HKD3_k127_725702_5 Amino acid permease - - - 0.00000000000000000000006894 114.0
HKD3_k127_725702_6 amino acid - - - 0.00000000000000002123 96.0
HKD3_k127_7263062_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1268.0
HKD3_k127_7263062_1 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.0000000000000000000000000000000000000000000000000000000000000000001865 231.0
HKD3_k127_7300074_0 Psort location Cytoplasmic, score - - - 0.000000000000000000000000000000000000000000000000000000000000000000001027 251.0
HKD3_k127_7300074_1 PFAM Methyltransferase type 11 - - - 0.000000000000000000000000000000005825 130.0
HKD3_k127_7305973_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 9.458e-204 644.0
HKD3_k127_7305973_1 ROK family K00845,K13967,K19979,K20433 - 2.7.1.188,2.7.1.2,2.7.1.214,2.7.1.60,5.1.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 611.0
HKD3_k127_7305973_10 transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000772 345.0
HKD3_k127_7305973_11 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001531 318.0
HKD3_k127_7305973_12 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002089 344.0
HKD3_k127_7305973_13 glycerophosphodiester transmembrane transport K17246 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002571 284.0
HKD3_k127_7305973_14 Xylose isomerase-like TIM barrel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002848 259.0
HKD3_k127_7305973_15 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000003089 177.0
HKD3_k127_7305973_16 Two component transcriptional regulator, winged helix family - - - 0.00000000000000000000000000000000000000006482 161.0
HKD3_k127_7305973_17 Nucleoside H+ symporter K05820 - - 0.000000000000000000000000001985 119.0
HKD3_k127_7305973_18 conserved protein, contains double-stranded beta-helix domain - - - 0.00000000000000008729 86.0
HKD3_k127_7305973_19 domain protein - - - 0.000000000000005295 81.0
HKD3_k127_7305973_2 PFAM Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 570.0
HKD3_k127_7305973_20 Nucleoside H+ symporter K05820 - - 0.0000000151 61.0
HKD3_k127_7305973_21 Two component transcriptional regulator, winged helix family K07667 - - 0.000008304 54.0
HKD3_k127_7305973_22 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000008774 50.0
HKD3_k127_7305973_3 Xylose isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002542 458.0
HKD3_k127_7305973_4 Oxidoreductase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005021 434.0
HKD3_k127_7305973_5 carbohydrate transport K02027,K17244 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 422.0
HKD3_k127_7305973_6 PFAM ROK family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001857 396.0
HKD3_k127_7305973_7 N-acetylglucosaminylinositol deacetylase activity K01463 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002754 383.0
HKD3_k127_7305973_8 Sugar (and other) transporter K08151 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003422 358.0
HKD3_k127_7305973_9 PFAM binding-protein-dependent transport systems inner membrane component K02025,K05814,K10118,K10233,K15771,K17245 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 349.0
HKD3_k127_7313966_0 XFP C-terminal domain K01621 - 4.1.2.22,4.1.2.9 0.0 1210.0
HKD3_k127_7313966_1 Acetokinase family K00925 - 2.7.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 538.0
HKD3_k127_7313966_2 PFAM ABC-1 domain protein K03688 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002143 473.0
HKD3_k127_7313966_3 Belongs to the PEP-utilizing enzyme family K01007 - 2.7.9.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005795 343.0
HKD3_k127_7313966_4 PFAM metal-dependent phosphohydrolase HD sub domain K09163 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004138 286.0
HKD3_k127_7313966_5 - - - - 0.000000049 60.0
HKD3_k127_7313966_6 Patatin-like phospholipase K07001 - - 0.0009028 47.0
HKD3_k127_7319991_0 ABC-type multidrug transport system ATPase component K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006847 389.0
HKD3_k127_7319991_1 Beta-lactamase class C and other penicillin binding proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003291 314.0
HKD3_k127_7319991_10 Tetratricopeptide repeat - - - 0.000005096 55.0
HKD3_k127_7319991_2 Beta-lactamase class C and other penicillin binding proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008144 295.0
HKD3_k127_7319991_3 PFAM aldo keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009798 282.0
HKD3_k127_7319991_4 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006987 256.0
HKD3_k127_7319991_5 metal-dependent membrane protease K07052 GO:0003674,GO:0003824,GO:0004175,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009987,GO:0010467,GO:0016020,GO:0016021,GO:0016485,GO:0016787,GO:0019538,GO:0031224,GO:0031226,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0051604,GO:0070011,GO:0071586,GO:0071704,GO:0071944,GO:0080120,GO:0140096,GO:1901564 - 0.000000000000000000000000000000000015 147.0
HKD3_k127_7319991_6 ABC-type transport system involved in multi-copper enzyme maturation, permease K01992 - - 0.000000000000000000000000000000675 132.0
HKD3_k127_7319991_7 CAAX protease self-immunity K07052 - - 0.00000000000000000002562 99.0
HKD3_k127_7319991_8 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.00000000000000000003233 99.0
HKD3_k127_7319991_9 - - - - 0.000000000000002414 80.0
HKD3_k127_7333407_0 PFAM response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002792 256.0
HKD3_k127_7333407_1 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000001721 185.0
HKD3_k127_7333407_2 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.0000000000000000000000000000000000000000000008057 173.0
HKD3_k127_7336142_0 PFAM extracellular solute-binding protein, family 5 K02035 - - 1.21e-215 685.0
HKD3_k127_7336142_1 N-terminal TM domain of oligopeptide transport permease C K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004704 357.0
HKD3_k127_7336142_2 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001584 289.0
HKD3_k127_7336142_3 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000003023 219.0
HKD3_k127_7336142_4 PFAM Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000935 213.0
HKD3_k127_7336142_5 acetyltransferase - - - 0.0004888 47.0
HKD3_k127_7349820_0 PFAM Fumarate lyase K01744 - 4.3.1.1 1.369e-202 639.0
HKD3_k127_7349820_1 Type II/IV secretion system protein K02283 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 560.0
HKD3_k127_7349820_2 PFAM response regulator receiver K02282 - - 0.00000000000000000000000000000000000000000000000000000005125 211.0
HKD3_k127_7349820_3 Type II secretion system (T2SS), protein F K12511 - - 0.00000000000000000000000000000000000000000000000000001733 201.0
HKD3_k127_7349820_4 Type II secretion system (T2SS), protein F K12510 - - 0.00000000000000000000000000000000000000000000000031 188.0
HKD3_k127_7349820_5 Involved in the tonB-independent uptake of proteins - - - 0.0000000000000000000000000000000000000002043 161.0
HKD3_k127_7349820_6 Flp pilus assembly protein CpaB K02279 - - 0.00000000000000000000000005554 118.0
HKD3_k127_7349820_7 'Cold-shock' DNA-binding domain K03704 - - 0.0000000000000000000004222 96.0
HKD3_k127_7349820_8 Involved in the tonB-independent uptake of proteins K03641 - - 0.00000000000000006009 95.0
HKD3_k127_7366495_0 Clostripain family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009697 605.0
HKD3_k127_7366495_1 fad dependent oxidoreductase K07222 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009826 412.0
HKD3_k127_7366495_2 Male sterility protein K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000912 400.0
HKD3_k127_7366495_3 protein histidine kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008769 314.0
HKD3_k127_7366495_4 Two component transcriptional regulator, winged helix family K07665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007612 280.0
HKD3_k127_7366495_5 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.0000000000000000000000000000000000000000000000002957 188.0
HKD3_k127_7366495_6 Divergent PAP2 family K09775 - - 0.0000000000000000000000000000000000000000000004321 170.0
HKD3_k127_7366495_7 Ferric reductase like transmembrane component - - - 0.00000000000000000000000000000006349 136.0
HKD3_k127_7366495_8 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.0000000000311 68.0
HKD3_k127_7370816_0 3-demethylubiquinone-9 3-O-methyltransferase activity K06219 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005372 332.0
HKD3_k127_7370816_1 PFAM amidinotransferase K01482 - 3.5.3.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008506 291.0
HKD3_k127_7370816_2 PFAM Trimethylamine methyltransferase (MTTB) K14083 - 2.1.1.250 0.0000000000000000000000000000000000000000000000000000009498 210.0
HKD3_k127_7370816_3 Copper amine oxidase N-terminal domain - - - 0.00000000000000000000000000000000000202 139.0
HKD3_k127_7370816_4 Trimethylamine methyltransferase (MTTB) - - - 0.0000000000000000000002557 102.0
HKD3_k127_7387757_0 PFAM glycosyl transferase, family 35 K00688 - 2.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002056 577.0
HKD3_k127_7387757_1 TIGRFAM iron-sulfur cluster binding protein K18929 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 386.0
HKD3_k127_7387757_2 Cysteine-rich domain K18928 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001238 279.0
HKD3_k127_7389352_0 Glycosyl hydrolase 36 superfamily, catalytic domain K00702 - 2.4.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000037 491.0
HKD3_k127_7389352_1 ABC-type multidrug transport system ATPase component K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003208 381.0
HKD3_k127_7389352_10 AAA ATPase domain - - - 0.00000000006526 71.0
HKD3_k127_7389352_11 - - - - 0.00000001672 60.0
HKD3_k127_7389352_12 Acetyltransferase (GNAT) domain - - - 0.00000003203 61.0
HKD3_k127_7389352_13 CAAX amino terminal protease family protein K07052 - - 0.00000125 60.0
HKD3_k127_7389352_14 - - - - 0.00001243 57.0
HKD3_k127_7389352_2 beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006804 302.0
HKD3_k127_7389352_3 - - - - 0.000000000000000000000000000000000000000000000003789 176.0
HKD3_k127_7389352_4 trisaccharide binding - - - 0.000000000000000000000000000000000000001171 164.0
HKD3_k127_7389352_5 - - - - 0.0000000000000000000000000000004045 124.0
HKD3_k127_7389352_6 PFAM blue (type 1) copper domain protein K00368 - 1.7.2.1 0.000000000000000000000000000004303 135.0
HKD3_k127_7389352_7 CAAX protease self-immunity - - - 0.00000000000000000000000000002346 128.0
HKD3_k127_7389352_8 ABC-type transport system involved in multi-copper enzyme maturation, permease K01992 - - 0.000000000000000000000003809 112.0
HKD3_k127_7389352_9 Domain of unknown function (DUF333) K09712 - - 0.0000000000000000000005528 110.0
HKD3_k127_7402505_0 TIGRFAM Carbon-monoxide dehydrogenase, catalytic subunit K00198 - 1.2.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006264 559.0
HKD3_k127_7402505_1 HD domain K07814 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001883 514.0
HKD3_k127_7402505_2 Pyridine nucleotide-disulphide oxidoreductase K00362 - 1.7.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005492 282.0
HKD3_k127_7402505_3 Domain of unknown function DUF11 - - - 0.00002554 57.0
HKD3_k127_7410035_0 metal-dependent phosphohydrolase, HD sub domain K07037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002721 608.0
HKD3_k127_7410035_1 deoxyribonuclease IV (phage-T4-induced) activity K01151 - 3.1.21.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003159 375.0
HKD3_k127_7410035_2 PFAM diacylglycerol kinase K00901 - 2.7.1.107 0.00000000000000000000000000000000000000006421 154.0
HKD3_k127_7410035_3 Yqey-like protein K09117 - - 0.0000000000000000000000000000000000001106 146.0
HKD3_k127_7410035_4 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.000000000000000000000000004915 115.0
HKD3_k127_7441508_0 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.00000000000000000000000000000000000000001021 167.0
HKD3_k127_7441508_1 - - - - 0.000000000000000000002141 103.0
HKD3_k127_7444440_0 PFAM WD domain, G-beta repeat - - - 0.000000000000000000000000000000000000000000000000000000000000007237 244.0
HKD3_k127_7453385_0 ADP binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000473 622.0
HKD3_k127_7453385_1 PFAM DNA photolyase, FAD-binding K01669 - 4.1.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001881 445.0
HKD3_k127_7453385_10 YCII-related domain - - - 0.000004304 54.0
HKD3_k127_7453385_2 PFAM major facilitator superfamily MFS_1 K08151 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002186 432.0
HKD3_k127_7453385_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002453 370.0
HKD3_k127_7453385_4 PFAM regulatory protein, MerR K22491 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006563 321.0
HKD3_k127_7453385_5 ABC-type multidrug transport system ATPase component K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003257 270.0
HKD3_k127_7453385_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000001058 235.0
HKD3_k127_7453385_7 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000172 121.0
HKD3_k127_7453385_8 ABC-type transport system involved in multi-copper enzyme maturation, permease K01992 - - 0.000000000000000000000006318 111.0
HKD3_k127_7453385_9 peroxiredoxin activity K03386,K03564,K16922 - 1.11.1.15 0.0000004895 55.0
HKD3_k127_7454441_0 Belongs to the RtcB family K14415 - 6.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000001228 242.0
HKD3_k127_7454441_1 Archease protein family (MTH1598/TM1083) - - - 0.000000000000000000000000000000000001035 143.0
HKD3_k127_7454441_2 PFAM Forkhead-associated protein - - - 0.0000000000000000000000000000000001005 139.0
HKD3_k127_7454441_3 PFAM Forkhead-associated protein - - - 0.0000000000000000014 95.0
HKD3_k127_7454441_4 - - - - 0.000000000001654 78.0
HKD3_k127_7479530_0 tRNA synthetases class I (E and Q), anti-codon binding domain K01886 - 6.1.1.18 8.138e-276 858.0
HKD3_k127_7479530_1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 1.513e-270 842.0
HKD3_k127_7479530_10 Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009543 362.0
HKD3_k127_7479530_11 ErfK ybiS ycfS ynhG family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009477 359.0
HKD3_k127_7479530_12 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002431 318.0
HKD3_k127_7479530_13 Involved in formation and maintenance of cell shape K03570 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 289.0
HKD3_k127_7479530_14 helix_turn_helix, mercury resistance - - - 0.000000000000000000000000000000000000000000000000000000000000446 220.0
HKD3_k127_7479530_15 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.000000000000000000000000000000000000000000000000000000000008171 211.0
HKD3_k127_7479530_16 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000002041 209.0
HKD3_k127_7479530_17 PD-(D/E)XK nuclease superfamily - - - 0.00000000000000000000000000000000000000000000004374 181.0
HKD3_k127_7479530_18 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase K19200 - - 0.00000000000000000000000000000000000000004039 166.0
HKD3_k127_7479530_2 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 9.564e-246 781.0
HKD3_k127_7479530_20 Dienelactone hydrolase family - - - 0.0000000000000000003143 93.0
HKD3_k127_7479530_3 PFAM penicillin-binding protein transpeptidase K05515 - 3.4.16.4 3.051e-237 753.0
HKD3_k127_7479530_4 DNA helicase - - - 1.761e-231 736.0
HKD3_k127_7479530_5 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 1.209e-226 710.0
HKD3_k127_7479530_6 Myo-inositol-1-phosphate synthase, GAPDH domain protein K01858 - 5.5.1.4 5.899e-210 655.0
HKD3_k127_7479530_7 DHH family K07462 - - 8.437e-202 654.0
HKD3_k127_7479530_8 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003232 526.0
HKD3_k127_7479530_9 Belongs to the SEDS family K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002875 420.0
HKD3_k127_7533020_0 penicillin amidase K01434 - 3.5.1.11 1.036e-288 904.0
HKD3_k127_7533020_1 Peptidase M16 domain protein K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002399 518.0
HKD3_k127_7533020_10 - - - - 0.0000000000000000000000000001266 125.0
HKD3_k127_7533020_11 Phospholipase_D-nuclease N-terminal - - - 0.000000000000004616 76.0
HKD3_k127_7533020_2 Insulinase (Peptidase family M16) K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008989 467.0
HKD3_k127_7533020_3 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00528 - 1.18.1.2,1.19.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005733 463.0
HKD3_k127_7533020_4 Domain of unknown function (DUF4162) K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003541 312.0
HKD3_k127_7533020_5 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005305 301.0
HKD3_k127_7533020_7 HhH-GPD family K03575 - - 0.0000000000000000000000000000000000000000001033 164.0
HKD3_k127_7533020_8 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000007607 139.0
HKD3_k127_7533020_9 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.0000000000000000000000000000003611 126.0
HKD3_k127_7559359_0 VWA domain containing CoxE-like protein K07114 - - 8.591e-234 749.0
HKD3_k127_7559359_1 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K01259 - 3.4.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 297.0
HKD3_k127_7559359_2 Phospholipid methyltransferase - - - 0.00000000000006637 79.0
HKD3_k127_7559359_3 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000005031 60.0
HKD3_k127_7564100_0 Aminoglycoside-2''-adenylyltransferase K19545 - - 0.00000000000000000000000000000000000000000000000000000000000000004253 226.0
HKD3_k127_7564100_1 - - - - 0.000000000000000000000000000000000000000000000000000000005222 207.0
HKD3_k127_7564100_2 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000001528 175.0
HKD3_k127_7564100_3 Calcium/calmodulin dependent protein kinase II association domain - - - 0.00000000000000000000000166 113.0
HKD3_k127_7564100_4 Calcium/calmodulin dependent protein kinase II association domain - - - 0.0000000000685 72.0
HKD3_k127_7570788_0 Family 4 glycosyl hydrolase K01222,K07406 - 3.2.1.22,3.2.1.86 2.108e-231 722.0
HKD3_k127_7570788_1 domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002847 527.0
HKD3_k127_7570788_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002853 265.0
HKD3_k127_7570788_3 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.00000000000000000000000000000000000000000000000000000000006721 207.0
HKD3_k127_7570788_5 - - - - 0.0000000000001346 75.0
HKD3_k127_7570788_6 - - - - 0.00000002723 62.0
HKD3_k127_7570788_7 LuxR family transcriptional regulator - - - 0.0003098 51.0
HKD3_k127_7574886_0 Peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004909 645.0
HKD3_k127_7596894_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1273.0
HKD3_k127_7596894_1 O-methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003978 259.0
HKD3_k127_7596894_2 - - - - 0.0000000000000000000000000000000000000000000000000002957 203.0
HKD3_k127_7628592_0 Short-chain dehydrogenase reductase SDR - - - 3.334e-233 737.0
HKD3_k127_7628592_1 Bacterial sugar transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002475 503.0
HKD3_k127_7628592_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0050136,GO:0055114,GO:0098796,GO:1902494 1.6.5.3 0.0000000000000000000000000000000004049 134.0
HKD3_k127_7628592_11 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340,K05576 - 1.6.5.3 0.000000000000000000000000000000001503 132.0
HKD3_k127_7628592_12 Pyridoxal-phosphate dependent enzyme K17950 - 4.4.1.25 0.0000000000000000000000000000001734 124.0
HKD3_k127_7628592_2 PFAM NADH-Ubiquinone oxidoreductase (complex I), chain 5 L domain protein K00341 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002185 449.0
HKD3_k127_7628592_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002573 439.0
HKD3_k127_7628592_4 PFAM Methicillin resistance protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 376.0
HKD3_k127_7628592_5 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006031 363.0
HKD3_k127_7628592_6 PFAM Methicillin resistance protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006085 345.0
HKD3_k127_7628592_7 Creatinine amidohydrolase K01470 - 3.5.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001619 329.0
HKD3_k127_7628592_8 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.0000000000000000000000000000000000000000001335 164.0
HKD3_k127_7628592_9 oxidation-reduction process K09022 - 3.5.99.10 0.00000000000000000000000000000000000001441 147.0
HKD3_k127_7660780_0 PBP superfamily domain K03750,K07219 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000635 316.0
HKD3_k127_7660780_1 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003264 339.0
HKD3_k127_7660780_2 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000005385 239.0
HKD3_k127_7664596_0 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000451 236.0
HKD3_k127_7664596_1 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000112 233.0
HKD3_k127_7664596_2 Linear amide C-N hydrolases, choloylglycine hydrolase family K01442 - 3.5.1.24 0.000000000000000000000000000000000000000000000000000000000000005514 230.0
HKD3_k127_7664596_3 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.000000000000000000000000000004115 121.0
HKD3_k127_7664596_4 SnoaL-like polyketide cyclase - - - 0.00000000000000002198 87.0
HKD3_k127_7667993_0 histidine kinase, dimerisation and phosphoacceptor region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002513 576.0
HKD3_k127_7667993_1 aminotransferase class I and II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002118 447.0
HKD3_k127_7667993_10 acetyltransferase - - - 0.000000000000000002954 95.0
HKD3_k127_7667993_11 - - - - 0.00000000000000002414 93.0
HKD3_k127_7667993_12 - K03686 - - 0.0000000000002026 73.0
HKD3_k127_7667993_13 - - - - 0.0000000003022 63.0
HKD3_k127_7667993_14 Protein of unknown function (DUF2917) - - - 0.0000003845 56.0
HKD3_k127_7667993_2 PFAM major facilitator superfamily MFS_1 K08217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001595 415.0
HKD3_k127_7667993_3 Bacterial protein of unknown function (DUF885) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008976 422.0
HKD3_k127_7667993_4 Part of the MsrPQ system that repairs oxidized cell envelope proteins containing methionine sulfoxide residues (Met- O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated cell envelope proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004434 378.0
HKD3_k127_7667993_5 PFAM tRNA rRNA methyltransferase (SpoU) K03437 - - 0.000000000000000000000000000000000000000000000000000000000000000000000008269 251.0
HKD3_k127_7667993_6 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000001829 218.0
HKD3_k127_7667993_7 NADPH-dependent FMN reductase - - - 0.00000000000000000000000000000000000000000000000000007509 192.0
HKD3_k127_7667993_8 Part of the MsrPQ system that repairs oxidized cell envelope proteins containing methionine sulfoxide residues (Met- O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated cell envelope proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain K17247 - - 0.00000000000000000000000000000000000000000000001583 177.0
HKD3_k127_7667993_9 tRNA wobble cytosine modification - - - 0.00000000000000000004328 102.0
HKD3_k127_7692752_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378 - 1.6.5.3 8.081e-286 889.0
HKD3_k127_7692752_1 Pyruvate flavodoxin ferredoxin oxidoreductase domain protein K00174 - 1.2.7.11,1.2.7.3 9.162e-249 781.0
HKD3_k127_7692752_10 - - - - 0.00000000000000000000002363 103.0
HKD3_k127_7692752_2 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002339 509.0
HKD3_k127_7692752_3 PFAM thiamine pyrophosphate protein domain protein TPP-binding K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002972 482.0
HKD3_k127_7692752_4 Peptidase dimerisation domain protein K01436 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 468.0
HKD3_k127_7692752_5 PFAM PSP1 domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003139 318.0
HKD3_k127_7692752_6 SERine Proteinase INhibitors K13963 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002712 318.0
HKD3_k127_7692752_7 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00338,K03615 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008467 302.0
HKD3_k127_7692752_8 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007206 295.0
HKD3_k127_7692752_9 GlcNAc-PI de-N-acetylase - - - 0.000000000000000000000000000000000000000000000000000000000004468 216.0
HKD3_k127_7765141_0 Belongs to the MenA family. Type 1 subfamily K02548 - 2.5.1.74 0.00000000000000000000000000000000000000000000000000000000000000000009931 242.0
HKD3_k127_7765141_1 Leucine carboxyl methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000943 233.0
HKD3_k127_7765141_2 Esterase of the alpha-beta hydrolase superfamily K07001 - - 0.00000000000000000000000000000000000000000000000000005537 205.0
HKD3_k127_7765141_3 Aminoacyl-tRNA editing domain - - - 0.000000000000000000000000000000000000000000001976 169.0
HKD3_k127_7765141_4 Carotenoid biosynthesis protein K22502 - 5.5.1.19 0.0000000000000000000000000000000000004393 151.0
HKD3_k127_7765141_5 Domain of unknown function (DUF4203) - - - 0.000000000000000000000007135 108.0
HKD3_k127_7765141_6 Glycosyl transferase family 21 - - - 0.0001854 49.0
HKD3_k127_7920506_0 Acyl- CoA dehydrogenase type 2 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004517 524.0
HKD3_k127_7920506_1 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0019538,GO:0043170,GO:0044238,GO:0071704,GO:1901564 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 452.0
HKD3_k127_7920506_2 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002002 396.0
HKD3_k127_7920506_3 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004687 345.0
HKD3_k127_7920506_4 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003838 333.0
HKD3_k127_7920506_5 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid - - - 0.00000000000000000000000000000000000000000000000000000000000006314 224.0
HKD3_k127_7920506_6 Telomere recombination K07566 - 2.7.7.87 0.000000000000000000000000000000000000000000000001056 181.0
HKD3_k127_7920506_7 ubiE/COQ5 methyltransferase family - - - 0.000000000001075 76.0
HKD3_k127_7945566_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.0 1185.0
HKD3_k127_7945566_1 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 3.179e-288 908.0
HKD3_k127_7945566_10 Spermine/spermidine synthase domain - - - 0.00000000000000000000000000000000000000000008399 164.0
HKD3_k127_7945566_11 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.00000000000000000000000000000000002008 141.0
HKD3_k127_7945566_2 PFAM cytoplasmic peptidoglycan synthetase domain protein K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007445 445.0
HKD3_k127_7945566_3 PFAM AAA-4 family protein K03655 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002597 370.0
HKD3_k127_7945566_4 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005745 349.0
HKD3_k127_7945566_5 TIGRFAM metal dependent phophohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002665 294.0
HKD3_k127_7945566_6 DUF218 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005702 254.0
HKD3_k127_7945566_7 Baseplate J-like protein K01218 - 3.2.1.78 0.00000000000000000000000000000000000000000000000000000000000000001806 243.0
HKD3_k127_7945566_8 Protein of unknown function (DUF692) - - - 0.0000000000000000000000000000000000000000000000000000000000001883 221.0
HKD3_k127_7945566_9 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0032535,GO:0042592,GO:0044425,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0090066 - 0.000000000000000000000000000000000000000000000000003494 185.0
HKD3_k127_7956626_0 ABC-type multidrug transport system ATPase K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003328 421.0
HKD3_k127_7956626_1 PFAM Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008967 450.0
HKD3_k127_7956626_2 COGs COG2208 Serine phosphatase RsbU regulator of sigma subunit K01768,K07315 - 3.1.3.3,4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003702 291.0
HKD3_k127_7956626_3 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000000001128 205.0
HKD3_k127_7956626_4 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000003132 198.0
HKD3_k127_7956626_5 - K01992 - - 0.00000000000000000000000000000000000000000000000000003476 197.0
HKD3_k127_7964509_0 acyl-phosphate glycerol-3-phosphate acyltransferase activity K08591 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000005113 226.0
HKD3_k127_7964509_1 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000008179 175.0
HKD3_k127_7964509_2 proteolysis K21140 - 3.13.1.6 0.000000000000000000000001371 108.0
HKD3_k127_7983476_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 400.0
HKD3_k127_7983476_1 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 400.0
HKD3_k127_7983476_2 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001578 278.0
HKD3_k127_7983476_3 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004564 271.0
HKD3_k127_7983476_4 Psort location CytoplasmicMembrane, score - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009404 286.0
HKD3_k127_7983476_5 Belongs to the bacterial ribosomal protein bL32 family K02911 GO:0000027,GO:0000302,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006950,GO:0006979,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050896,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1990904 - 0.00000000000000000000006518 98.0
HKD3_k127_8026189_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 1206.0
HKD3_k127_8026189_1 PFAM ABC transporter related K09972 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 417.0
HKD3_k127_8026189_2 TIGRFAM polar amino acid ABC transporter, inner membrane subunit K09970 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001934 337.0
HKD3_k127_8026189_3 Binding-protein-dependent transport system inner membrane component K09971 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004586 328.0
HKD3_k127_8026189_4 Belongs to the bacterial solute-binding protein 3 family K02030,K09969,K10039 - - 0.000000000000000000000000000000009968 129.0
HKD3_k127_8041552_0 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004042 401.0
HKD3_k127_8041552_1 PFAM ABC transporter related K02193 - 3.6.3.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000978 327.0
HKD3_k127_8041552_2 PFAM cytochrome c-type biogenesis protein CcmB K02194 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009191 321.0
HKD3_k127_8041552_3 PFAM ABC transporter related K02028 - 3.6.3.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002536 311.0
HKD3_k127_8041552_4 PFAM Cytochrome C assembly protein K02195 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003442 304.0
HKD3_k127_8041552_5 zinc-ribbon domain - - - 0.000000000000000002314 90.0
HKD3_k127_8041552_7 Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family K07402 - - 0.0003059 46.0
HKD3_k127_8169083_0 histidine kinase HAMP region domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002978 433.0
HKD3_k127_8169083_1 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002906 417.0
HKD3_k127_8169083_10 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.00000000000000000000001679 100.0
HKD3_k127_8169083_11 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.00000001231 59.0
HKD3_k127_8169083_2 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007671 374.0
HKD3_k127_8169083_3 Two component transcriptional regulator, winged helix family K07669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002834 336.0
HKD3_k127_8169083_4 Participates in transcription elongation, termination and antitermination K02601 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004356 328.0
HKD3_k127_8169083_5 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000009193 228.0
HKD3_k127_8169083_6 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.00000000000000000000000000000000000000000000002516 173.0
HKD3_k127_8169083_7 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000002094 169.0
HKD3_k127_8169083_8 - - - - 0.000000000000000000000000000000000000000003172 162.0
HKD3_k127_8169083_9 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000004348 165.0
HKD3_k127_82007_0 ADP-glyceromanno-heptose 6-epimerase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000167 452.0
HKD3_k127_82007_1 ATP-dependent transcriptional regulator, MalT-like, LuxR family K03556 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006775 398.0
HKD3_k127_82007_2 PFAM Glycosyl transferase family 2 K00721 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000875 296.0
HKD3_k127_82007_3 carboxylic ester hydrolase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000224 293.0
HKD3_k127_82007_4 - - - - 0.000000000000000000000000000000000000000000000000000000000002711 223.0
HKD3_k127_82007_5 RibD C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000005209 199.0
HKD3_k127_82007_6 TIGRFAM molybdenum cofactor synthesis K03750,K07219 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000001917 201.0
HKD3_k127_82007_7 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000000000004025 187.0
HKD3_k127_8255251_0 Transketolase, pyrimidine binding domain - - - 1.173e-238 757.0
HKD3_k127_8255251_1 WD40-like Beta Propeller Repeat - - - 0.00000000000000000000000000000000003802 156.0
HKD3_k127_8255251_2 glyoxalase III activity - - - 0.00000000000002166 82.0
HKD3_k127_8255251_3 PFAM peptidase S1 and S6, chymotrypsin Hap - - - 0.0000002452 61.0
HKD3_k127_8257398_0 Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 1.646e-199 638.0
HKD3_k127_8257398_1 Aromatic amino acid lyase K01745 - 4.3.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008118 588.0
HKD3_k127_8257398_2 4Fe-4S binding domain - - - 0.0000000000000000000000000000000002047 136.0
HKD3_k127_8466923_0 PFAM major facilitator superfamily MFS_1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009893 508.0
HKD3_k127_8466923_1 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00113 - 1.1.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002589 505.0
HKD3_k127_8466923_10 dipeptide transport K02035 - - 0.00000000000000000000000000000000000000000000000000000000002107 227.0
HKD3_k127_8466923_11 pfkB family carbohydrate kinase - - - 0.00000000000000000000000000000000000000000000000000000000307 210.0
HKD3_k127_8466923_12 Peptidase dimerisation domain - - - 0.00004116 48.0
HKD3_k127_8466923_2 Belongs to the ABC transporter superfamily K10823 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 439.0
HKD3_k127_8466923_3 Belongs to the ABC transporter superfamily K02031,K15583 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003428 414.0
HKD3_k127_8466923_4 MFS_1 like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 382.0
HKD3_k127_8466923_5 family 4 K01222 - 3.2.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008531 329.0
HKD3_k127_8466923_6 acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006675 285.0
HKD3_k127_8466923_7 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002834 266.0
HKD3_k127_8466923_8 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004335 253.0
HKD3_k127_8466923_9 carboxylic ester hydrolase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000001732 241.0
HKD3_k127_8470895_0 aminopeptidase activity K01179,K01269 - 3.2.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002299 503.0
HKD3_k127_8470895_1 PFAM luciferase family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007423 381.0
HKD3_k127_8470895_2 Histidine kinase K07646 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000001446 267.0
HKD3_k127_8470895_3 Transcriptional regulatory protein, C terminal K07667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000006514 246.0
HKD3_k127_8470895_4 PD-(D/E)XK nuclease superfamily - - - 0.0000000000000000000000000000000000000000000001823 171.0
HKD3_k127_8470895_5 PFAM thioesterase superfamily protein K07107 - - 0.0000000000000000000000000000000000006732 144.0
HKD3_k127_8470895_6 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 0.000003079 51.0
HKD3_k127_8475182_0 WD40 repeats - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004198 359.0
HKD3_k127_8475359_0 cobalamin binding - - - 2.749e-264 822.0
HKD3_k127_8475359_1 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain K04940 - 1.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 565.0
HKD3_k127_8475359_2 cobalamin binding - - - 0.0000000000000000000000000000000000000000000000000000000000002165 225.0
HKD3_k127_8475359_3 Cyclic-di-AMP receptor - - - 0.000000000000000000000000598 108.0
HKD3_k127_8475359_4 Cyclic-di-AMP receptor - - - 0.0000000000000000000009324 97.0
HKD3_k127_8475359_5 PFAM alpha beta hydrolase fold - - - 0.0000000000001079 76.0
HKD3_k127_8511008_0 PFAM Arsenical pump membrane protein K03893 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004844 484.0
HKD3_k127_8511008_1 histidine kinase A domain protein K02484,K07642 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001753 395.0
HKD3_k127_8511008_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004986 332.0
HKD3_k127_8511008_3 Two component transcriptional regulator, winged helix family K02483 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009578 283.0
HKD3_k127_8511008_4 Psort location Cytoplasmic, score K14731 - 3.1.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005531 277.0
HKD3_k127_8511008_5 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.00000000000000000000000000000000000000000000000000000000000007955 226.0
HKD3_k127_8511008_6 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0000000000000000000000000000000002459 135.0
HKD3_k127_8511008_7 GTPase activity K06949 - 3.1.3.100 0.000000000000000000002411 100.0
HKD3_k127_8512202_0 helix_turn_helix, Lux Regulon K03556 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001672 539.0
HKD3_k127_8512202_1 PFAM Major Facilitator Superfamily K03292 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003064 510.0
HKD3_k127_8512202_10 Esterase of the alpha-beta hydrolase superfamily K07001 - - 0.0000000000000000000000000000000000000000001275 171.0
HKD3_k127_8512202_11 lactoylglutathione lyase activity - - - 0.00000000000000000000000000000000000009965 145.0
HKD3_k127_8512202_12 - - - - 0.0000000000000000000000000000002393 129.0
HKD3_k127_8512202_13 CAAX protease self-immunity K07052 - - 0.000000000000000000008082 103.0
HKD3_k127_8512202_14 - - - - 0.00000004684 57.0
HKD3_k127_8512202_2 Formate/nitrite transporter K06212 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003113 358.0
HKD3_k127_8512202_3 Belongs to the enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006144 324.0
HKD3_k127_8512202_4 DNA polymerase alpha chain like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007548 323.0
HKD3_k127_8512202_5 aminoglycoside 3-N-acetyltransferase activity K00662 - 2.3.1.81 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 294.0
HKD3_k127_8512202_6 phosphorelay signal transduction system K07670 - - 0.0000000000000000000000000000000000000000000000000000000000003442 218.0
HKD3_k127_8512202_7 Linear amide C-N hydrolases, choloylglycine hydrolase family K01442 - 3.5.1.24 0.0000000000000000000000000000000000000000000000000000000008918 214.0
HKD3_k127_8512202_8 PhoQ Sensor - - - 0.00000000000000000000000000000000000000000000000000000001008 222.0
HKD3_k127_8512202_9 esterase K03930 - - 0.00000000000000000000000000000000000000000000000000001223 198.0
HKD3_k127_8517876_0 TIGRFAM methylmalonyl-CoA mutase, large subunit K01848 - 5.4.99.2 8.214e-252 788.0
HKD3_k127_8517876_1 Phosphofructokinase K21071 - 2.7.1.11,2.7.1.90 2.246e-204 641.0
HKD3_k127_8517876_10 response regulator K02479,K07695 GO:0001666,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0005575,GO:0005576,GO:0005615,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006355,GO:0006950,GO:0008150,GO:0009405,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010565,GO:0010604,GO:0010628,GO:0016020,GO:0018995,GO:0019216,GO:0019217,GO:0019219,GO:0019222,GO:0022611,GO:0030312,GO:0030430,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032502,GO:0033643,GO:0033646,GO:0033647,GO:0033648,GO:0033655,GO:0036293,GO:0043656,GO:0043657,GO:0044174,GO:0044215,GO:0044216,GO:0044217,GO:0044419,GO:0044421,GO:0044424,GO:0044444,GO:0044464,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0048583,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051704,GO:0060255,GO:0062012,GO:0065007,GO:0070482,GO:0071944,GO:0072493,GO:0080090,GO:0080134,GO:0097159,GO:0140110,GO:1901363,GO:1902680,GO:1902882,GO:1903506,GO:1903508,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003148 266.0
HKD3_k127_8517876_11 PFAM Phage tail collar - - - 0.000000000000000000000000000000000000000000000000000000000000000000004146 238.0
HKD3_k127_8517876_12 Bacterial Ig-like domain (group 3) - - - 0.00000000000000000000000000000000000000000000000000000000000000000003829 266.0
HKD3_k127_8517876_13 Phage Tail Collar Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000004064 226.0
HKD3_k127_8517876_14 PFAM Phage tail collar - - - 0.000000000000000000000000000000000000000000000000000000000000001696 222.0
HKD3_k127_8517876_16 PFAM DoxX family protein K16937 - 1.8.5.2 0.000000000000000000000000000000000000000000000000000000004262 205.0
HKD3_k127_8517876_17 Transcriptional regulator IclR K13641 - - 0.000000000000000000000000000000000000000000000000000001527 202.0
HKD3_k127_8517876_18 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000003516 145.0
HKD3_k127_8517876_19 domain, Protein - - - 0.0000000000000000000000001008 126.0
HKD3_k127_8517876_2 ABC transporter K10441,K10562 - 3.6.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003358 516.0
HKD3_k127_8517876_20 YacP-like NYN domain K06962 - - 0.00000000000000000000004926 105.0
HKD3_k127_8517876_21 - - - - 0.0000000000001431 74.0
HKD3_k127_8517876_22 2-dehydro-3-deoxyphosphogluconate aldolase 4-hydroxy-2-oxoglutarate aldolase K01625 - 4.1.2.14,4.1.3.42 0.00000000001582 67.0
HKD3_k127_8517876_23 cellulase activity - - - 0.0000009861 63.0
HKD3_k127_8517876_3 Aldehyde dehydrogenase family K00128 - 1.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005636 492.0
HKD3_k127_8517876_4 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway K00874 - 2.7.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004104 424.0
HKD3_k127_8517876_5 Histidine kinase K07680,K07778,K11617,K14988 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001796 401.0
HKD3_k127_8517876_6 Branched-chain amino acid transport system / permease component K02057,K10440 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001737 323.0
HKD3_k127_8517876_7 Periplasmic binding protein domain K10439 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003526 322.0
HKD3_k127_8517876_8 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane K01546 GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0008556,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0030312,GO:0030955,GO:0031004,GO:0031224,GO:0031226,GO:0031420,GO:0032991,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043167,GO:0043169,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0046872,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0071944,GO:0090533,GO:0090662,GO:0098533,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1902494,GO:1902495,GO:1904949,GO:1990351 3.6.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 286.0
HKD3_k127_8517876_9 exo-alpha-(2->6)-sialidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000535 297.0
HKD3_k127_856371_0 LysM domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004658 573.0
HKD3_k127_856371_1 LysM domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301 526.0
HKD3_k127_856371_2 pfkB family carbohydrate kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008579 332.0
HKD3_k127_856371_3 peptidase dimerisation domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002111 256.0
HKD3_k127_8565510_0 PFAM IstB domain protein ATP-binding protein K02315 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000637 515.0
HKD3_k127_8565510_1 Domain of unknown function (DUF4162) K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007026 384.0
HKD3_k127_8565510_2 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003047 323.0
HKD3_k127_8565510_3 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004109 264.0
HKD3_k127_8565510_4 Iron permease FTR1 family K07243 - - 0.000000000000000000000000000000000000000000000000000000000000000002754 235.0
HKD3_k127_8565510_5 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.00000000000000000000000000000000000000000000000000000000000005743 216.0
HKD3_k127_8565510_6 Belongs to the LOG family K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000001088 210.0
HKD3_k127_8565510_7 - - - - 0.00000000000000000000000000004433 130.0
HKD3_k127_8565510_8 nUDIX hydrolase - - - 0.0000000000000000000000004388 106.0
HKD3_k127_8565510_9 TIGRFAM primosome, DnaD subunit - - - 0.0000004618 53.0
HKD3_k127_8573585_0 Bacterial pre-peptidase C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005802 548.0
HKD3_k127_8573585_1 Belongs to the pyruvate kinase family K00873 GO:0003674,GO:0003824,GO:0004743,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 2.7.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008015 412.0
HKD3_k127_8573585_2 PFAM Dienelactone hydrolase K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000003637 229.0
HKD3_k127_8577777_0 ABC transporter permease K02011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001954 508.0
HKD3_k127_8577777_1 ATPases associated with a variety of cellular activities K02010 - 3.6.3.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001547 350.0
HKD3_k127_8577777_2 Helix-turn-helix domain, rpiR family - - - 0.00000000000000000000000000006347 127.0
HKD3_k127_8577777_3 ABC-type Fe3 transport system, periplasmic component - - - 0.000000000000000000000002068 112.0
HKD3_k127_8577777_4 Belongs to the uridine kinase family K00876 GO:0003674,GO:0003824,GO:0004849,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043094,GO:0043097,GO:0043174,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.7.1.48 0.0000000004998 71.0
HKD3_k127_8586601_0 Two component regulator propeller K17763 - - 4.739e-204 674.0
HKD3_k127_8586601_1 histidine kinase, dimerisation and phosphoacceptor region - - - 0.0000000000000000000000000000000001093 155.0
HKD3_k127_8586601_2 COGs COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K11618 - - 0.0000005258 52.0
HKD3_k127_8601196_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 2.218e-209 680.0
HKD3_k127_8601196_2 Peptidoglycan-binding LysM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003405 315.0
HKD3_k127_8620391_0 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002906 436.0
HKD3_k127_8620391_1 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 350.0
HKD3_k127_8620391_2 Formiminotransferase-cyclodeaminase - - - 0.0000000008333 64.0
HKD3_k127_8642188_0 Glycosyltransferase family 20 K00697 - 2.4.1.15,2.4.1.347 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006657 463.0
HKD3_k127_8642188_1 Glycosyltransferase Family 4 K21369 - 2.4.1.270 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004941 293.0
HKD3_k127_8642188_3 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.000000000000000000000000001079 124.0
HKD3_k127_8642188_4 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.0000000000000000000000005708 109.0
HKD3_k127_8642188_5 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.00000000001335 64.0
HKD3_k127_8642188_6 - - - - 0.00007283 48.0
HKD3_k127_8652669_0 Pyruvate:ferredoxin oxidoreductase core domain II K00174 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004421 344.0
HKD3_k127_8652669_1 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567,K10778 - 2.1.1.63 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002453 315.0
HKD3_k127_8652669_2 Pyruvate ferredoxin/flavodoxin oxidoreductase K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002291 302.0
HKD3_k127_8652669_3 PFAM extracellular solute-binding protein, family 5 K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002931 281.0
HKD3_k127_8652669_4 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002164 278.0
HKD3_k127_8652669_5 - - - - 0.00000000000000001358 95.0
HKD3_k127_8652669_6 Flavodoxin domain K00230 - 1.3.5.3 0.00000000000000002674 89.0
HKD3_k127_8692208_0 PFAM Shikimate quinate 5-dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009781 346.0
HKD3_k127_8692208_1 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005795 343.0
HKD3_k127_8692208_2 transferase activity, transferring acyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007854 315.0
HKD3_k127_8692208_3 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000000002573 213.0
HKD3_k127_8692208_4 TIGRFAM phosphodiesterase, MJ0936 family K07095 - - 0.0000000000000000000000000000000000000002438 155.0
HKD3_k127_8711237_0 Amidohydrolase family K01464,K01466 - 3.5.2.2,3.5.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003203 534.0
HKD3_k127_8711237_1 negative regulation of mitochondrial membrane permeability involved in apoptotic process K07508 - 2.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005048 281.0
HKD3_k127_8711237_2 7 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase K00950,K09007,K13940,K17488 - 2.7.6.3,3.5.4.16,3.5.4.39,4.1.2.25 0.0000000000000000000000000000000000000000000007161 171.0
HKD3_k127_8715400_0 Amidohydrolase family - - - 3.431e-221 693.0
HKD3_k127_8715400_1 Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family K01486 - 3.5.4.2 2.669e-217 685.0
HKD3_k127_8715400_2 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 411.0
HKD3_k127_8715400_3 MBOAT, membrane-bound O-acyltransferase family - - - 0.000000000000000000000000000000000000000000000004131 190.0
HKD3_k127_8733087_0 TIGRFAM acetyl coenzyme A synthetase (ADP forming), alpha domain K01905,K22224 - 6.2.1.13 4.172e-252 795.0
HKD3_k127_8733087_1 Porphyromonas-type peptidyl-arginine deiminase K10536 - 3.5.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000682 534.0
HKD3_k127_8733087_2 Amidohydrolase family K11540 - 2.1.3.2,3.5.2.3,6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004281 450.0
HKD3_k127_8733087_3 Luciferase-like monooxygenase K04091 - 1.14.14.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002296 393.0
HKD3_k127_8733087_4 Belongs to the ATCase OTCase family K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002373 394.0
HKD3_k127_8733087_5 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007252 326.0
HKD3_k127_8733087_6 PFAM DRTGG domain protein K06873 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001578 281.0
HKD3_k127_8733087_7 - - - - 0.00000000000000004597 91.0
HKD3_k127_8873785_0 PFAM NAD-dependent epimerase dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004868 411.0
HKD3_k127_8873785_1 PFAM Methyltransferase type 11 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007667 375.0
HKD3_k127_8873785_2 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005297 316.0
HKD3_k127_8873785_3 N-acetylglucosaminylinositol deacetylase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003082 296.0
HKD3_k127_8873785_5 DNA-binding transcription factor activity K02274 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000531 183.0
HKD3_k127_8902293_0 Aminotransferase class-V K00830,K03430 - 2.6.1.37,2.6.1.44,2.6.1.45,2.6.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004434 378.0
HKD3_k127_8902293_1 Protein of unknown function (DUF521) K09123 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003181 355.0
HKD3_k127_8902293_2 UbiD family decarboxylase K03182 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0016829,GO:0016830,GO:0016831,GO:0044424,GO:0044464 4.1.1.98 0.000000000000000000000000000000000000000001652 160.0
HKD3_k127_8902293_3 Belongs to the UPF0107 family K09128 - - 0.000000000000000000000000000000000007174 140.0
HKD3_k127_8920620_0 ATP synthesis coupled electron transport K00336 GO:0003674,GO:0003824,GO:0003954,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0009405,GO:0010941,GO:0016020,GO:0016491,GO:0016651,GO:0030312,GO:0033668,GO:0035821,GO:0042981,GO:0043067,GO:0043069,GO:0044003,GO:0044068,GO:0044403,GO:0044419,GO:0044464,GO:0044531,GO:0044532,GO:0048037,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051536,GO:0051540,GO:0051701,GO:0051704,GO:0051817,GO:0052040,GO:0052041,GO:0052150,GO:0052248,GO:0052433,GO:0052490,GO:0055114,GO:0060548,GO:0065007,GO:0071944 1.6.5.3 5.799e-310 970.0
HKD3_k127_8920620_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002634 610.0
HKD3_k127_8920620_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006242 608.0
HKD3_k127_8920620_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001647 517.0
HKD3_k127_8920620_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004176 299.0
HKD3_k127_8920620_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000005866 259.0
HKD3_k127_8920620_6 PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000902 216.0
HKD3_k127_8920620_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000009997 199.0
HKD3_k127_8920620_8 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.0000000000000000003967 91.0
HKD3_k127_8962357_0 Alpha amylase, catalytic domain - - - 0.0 1391.0
HKD3_k127_8962357_1 Belongs to the glycosyl hydrolase 57 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002281 552.0
HKD3_k127_8962357_2 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002334 363.0
HKD3_k127_8962357_3 ABC-type multidrug transport system, ATPase component K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008571 342.0
HKD3_k127_8962357_4 ABC-2 family transporter protein - - - 0.00000000000000000000000000000000000000000000000001749 189.0
HKD3_k127_8962357_5 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.000000000000000000000000000000000000000000001163 170.0
HKD3_k127_8968825_0 exo-alpha-(2->6)-sialidase activity - - - 1.551e-235 742.0
HKD3_k127_8968825_1 glucan 1,4-alpha-glucosidase activity - - - 7.821e-233 738.0
HKD3_k127_8968825_10 domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000001902 246.0
HKD3_k127_8968825_11 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17884 - 2.7.8.39 0.000000000000000000000000000000000000000000000000000000000004744 215.0
HKD3_k127_8968825_12 Zn peptidase - - - 0.00000000000000000000000000000000000000000000000000000006076 214.0
HKD3_k127_8968825_13 PFAM Pyruvate ferredoxin flavodoxin oxidoreductase K00177 - 1.2.7.3 0.000000000000000000000000000000000000000000000000001448 188.0
HKD3_k127_8968825_14 Belongs to the 5'-nucleotidase family K01081 - 3.1.3.5 0.00000000000000000000000000000000000000000000000005218 181.0
HKD3_k127_8968825_15 Kdo2-lipid A biosynthetic process K02517,K20543,K22311 - 2.3.1.241,2.3.1.265 0.000000000000000000000000000000000000000000002484 176.0
HKD3_k127_8968825_16 Cupin domain - - - 0.0000000000000000000000000000000000000001583 153.0
HKD3_k127_8968825_17 Phosphomannose isomerase type I K01809,K01840 - 5.3.1.8,5.4.2.8 0.00000000000000000000000000000000001082 154.0
HKD3_k127_8968825_18 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 K07025,K20866 - 3.1.3.10 0.00000000000000000000000000000001183 134.0
HKD3_k127_8968825_19 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 K07025,K20866 - 3.1.3.10 0.00000000000000000000000000000944 127.0
HKD3_k127_8968825_2 Belongs to the amidase family K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 533.0
HKD3_k127_8968825_20 PD-(D/E)XK nuclease superfamily - - - 0.0000000000000000000000000563 112.0
HKD3_k127_8968825_21 Large extracellular alpha-helical protein K06894,K08693 - 3.1.3.5,3.1.3.6,3.1.4.16 0.0000000000000000002098 103.0
HKD3_k127_8968825_22 4 iron, 4 sulfur cluster binding K00176,K00528,K03737,K20449 - 1.18.1.2,1.19.1.1,1.2.7.1,1.2.7.3,1.3.7.1 0.0000000000000000003644 89.0
HKD3_k127_8968825_23 Protein of unknown function (DUF1684) K09164 - - 0.000000000000000002354 89.0
HKD3_k127_8968825_24 PFAM Prenyltransferase squalene oxidase - - - 0.000000000000000002633 99.0
HKD3_k127_8968825_25 Belongs to the 5'-nucleotidase family K01081 - 3.1.3.5 0.0000000000000000624 84.0
HKD3_k127_8968825_26 Double zinc ribbon - - - 0.0000000000000009697 87.0
HKD3_k127_8968825_27 Histone-lysine N-methyltransferase K11423 GO:0000003,GO:0000018,GO:0000122,GO:0000226,GO:0000278,GO:0001501,GO:0001525,GO:0001568,GO:0001570,GO:0001701,GO:0001704,GO:0001706,GO:0001763,GO:0001817,GO:0001819,GO:0001838,GO:0001841,GO:0001843,GO:0001890,GO:0001892,GO:0001944,GO:0002009,GO:0002164,GO:0002165,GO:0002168,GO:0002252,GO:0002376,GO:0003006,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0006139,GO:0006259,GO:0006281,GO:0006282,GO:0006298,GO:0006325,GO:0006351,GO:0006354,GO:0006355,GO:0006357,GO:0006366,GO:0006368,GO:0006464,GO:0006479,GO:0006725,GO:0006807,GO:0006928,GO:0006950,GO:0006952,GO:0006955,GO:0006974,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007154,GO:0007165,GO:0007275,GO:0007369,GO:0007399,GO:0007417,GO:0007420,GO:0007444,GO:0007492,GO:0007498,GO:0007507,GO:0008092,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009058,GO:0009059,GO:0009605,GO:0009607,GO:0009615,GO:0009653,GO:0009719,GO:0009725,GO:0009755,GO:0009790,GO:0009791,GO:0009792,GO:0009887,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010033,GO:0010452,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010564,GO:0010569,GO:0010605,GO:0010629,GO:0010793,GO:0014020,GO:0014070,GO:0015631,GO:0016043,GO:0016070,GO:0016278,GO:0016279,GO:0016331,GO:0016477,GO:0016569,GO:0016570,GO:0016571,GO:0016740,GO:0016741,GO:0018022,GO:0018023,GO:0018024,GO:0018026,GO:0018027,GO:0018130,GO:0018193,GO:0018205,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0021915,GO:0022402,GO:0022414,GO:0023052,GO:0030154,GO:0030518,GO:0030522,GO:0030900,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032239,GO:0032259,GO:0032386,GO:0032465,GO:0032479,GO:0032481,GO:0032501,GO:0032502,GO:0032647,GO:0032727,GO:0032774,GO:0032870,GO:0032879,GO:0032880,GO:0033157,GO:0033554,GO:0033993,GO:0034097,GO:0034340,GO:0034641,GO:0034645,GO:0034654,GO:0034728,GO:0034968,GO:0035075,GO:0035076,GO:0035148,GO:0035220,GO:0035239,GO:0035295,GO:0035441,GO:0035987,GO:0036211,GO:0036314,GO:0036315,GO:0040011,GO:0040027,GO:0040028,GO:0042054,GO:0042221,GO:0043009,GO:0043014,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043401,GO:0043412,GO:0043414,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045087,GO:0045892,GO:0045934,GO:0046483,GO:0046822,GO:0046825,GO:0046831,GO:0046975,GO:0048332,GO:0048468,GO:0048513,GO:0048514,GO:0048518,GO:0048519,GO:0048523,GO:0048545,GO:0048562,GO:0048568,GO:0048580,GO:0048581,GO:0048583,GO:0048598,GO:0048608,GO:0048646,GO:0048701,GO:0048704,GO:0048705,GO:0048706,GO:0048729,GO:0048731,GO:0048856,GO:0048863,GO:0048864,GO:0048869,GO:0048870,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051049,GO:0051052,GO:0051093,GO:0051171,GO:0051172,GO:0051179,GO:0051219,GO:0051223,GO:0051239,GO:0051240,GO:0051241,GO:0051252,GO:0051253,GO:0051276,GO:0051302,GO:0051567,GO:0051607,GO:0051674,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0060039,GO:0060255,GO:0060322,GO:0060341,GO:0060429,GO:0060562,GO:0060606,GO:0060669,GO:0060976,GO:0060977,GO:0061062,GO:0061064,GO:0061458,GO:0061647,GO:0065007,GO:0070013,GO:0070201,GO:0070887,GO:0071310,GO:0071383,GO:0071390,GO:0071396,GO:0071407,GO:0071495,GO:0071704,GO:0071824,GO:0071840,GO:0072175,GO:0072358,GO:0072359,GO:0080090,GO:0080134,GO:0080135,GO:0090087,GO:0090304,GO:0097198,GO:0097305,GO:0097306,GO:0097659,GO:0097676,GO:0098542,GO:0140096,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901654,GO:1901655,GO:1901700,GO:1901701,GO:1902679,GO:1902850,GO:1903047,GO:1903506,GO:1903507,GO:1903827,GO:1904888,GO:1905634,GO:2000026,GO:2000112,GO:2000113,GO:2000197,GO:2000779,GO:2001020,GO:2001141 2.1.1.43 0.0004737 49.0
HKD3_k127_8968825_3 PFAM Pyruvate flavodoxin ferredoxin oxidoreductase K00174 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 441.0
HKD3_k127_8968825_4 PFAM Thiamine pyrophosphate K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 338.0
HKD3_k127_8968825_5 PFAM peptidase S1 and S6, chymotrypsin Hap K08070 - 1.3.1.74 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004258 313.0
HKD3_k127_8968825_6 Methyltransferase domain K06983 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 297.0
HKD3_k127_8968825_7 PFAM Methyltransferase type 11 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000221 284.0
HKD3_k127_8968825_8 ECF transporter, substrate-specific component K16927 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003215 285.0
HKD3_k127_8968825_9 Cobalt transport protein K16785 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002182 260.0
HKD3_k127_9005951_0 elongation factor Tu domain 2 protein K02355 - - 5e-324 1004.0
HKD3_k127_9005951_1 PA domain - - - 5.141e-283 886.0
HKD3_k127_9005951_2 peptidase M24 K01271 - 3.4.13.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001911 416.0
HKD3_k127_9005951_3 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005905 295.0
HKD3_k127_9005951_4 phosphatidate phosphatase activity K19302 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000007122 271.0
HKD3_k127_9005951_5 Serine aminopeptidase, S33 K03928 - 3.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000002546 231.0
HKD3_k127_9120918_0 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 479.0
HKD3_k127_9120918_1 Putative modulator of DNA gyrase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007541 476.0
HKD3_k127_9120918_2 Putative modulator of DNA gyrase K03592 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000555 321.0
HKD3_k127_9120918_3 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases - - - 0.00000000000000000000000000000000000000000000000000000000000000000001909 240.0
HKD3_k127_9120918_4 LysM domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000008105 235.0
HKD3_k127_9120918_5 Formamidopyrimidine-DNA glycosylase H2TH domain K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000000002621 189.0
HKD3_k127_9120918_6 coenzyme F420-1:gamma-L-glutamate ligase activity - - - 0.000000000000000000000000000000000000000000001343 173.0
HKD3_k127_9120918_7 Protein of unknown function (DUF1706) - - - 0.0000000000006952 75.0
HKD3_k127_9150492_0 PFAM UvrD REP helicase K03657 - 3.6.4.12 1.468e-278 875.0
HKD3_k127_9150492_1 PFAM UDP-glucose GDP-mannose dehydrogenase K13015 - 1.1.1.136 3.089e-205 646.0
HKD3_k127_9150492_10 DNA polymerase III, delta prime subunit K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005766 356.0
HKD3_k127_9150492_11 AAA domain K02282 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 349.0
HKD3_k127_9150492_12 Heat shock protein DnaJ domain protein K05516 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003105 347.0
HKD3_k127_9150492_13 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002298 311.0
HKD3_k127_9150492_14 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006077 304.0
HKD3_k127_9150492_15 FES K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009508 294.0
HKD3_k127_9150492_16 TIGRFAM phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008395 283.0
HKD3_k127_9150492_17 PFAM peptidase M22 glycoprotease K14742 - - 0.00000000000000000000000000000000000000000000000000000000000000000004317 237.0
HKD3_k127_9150492_18 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.00000000000000000000000000000000000000000000000000000000001523 211.0
HKD3_k127_9150492_19 Ribosomal-protein-alanine acetyltransferase K03789 - 2.3.1.128 0.00000000000000000000000000000000000000000007914 165.0
HKD3_k127_9150492_2 PFAM fumarate lyase K01679 - 4.2.1.2 1.968e-195 620.0
HKD3_k127_9150492_20 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000002748 71.0
HKD3_k127_9150492_21 SnoaL-like domain - - - 0.0000000004143 63.0
HKD3_k127_9150492_22 Glycosyltransferase family 87 - - - 0.000003303 59.0
HKD3_k127_9150492_3 CoA-transferase family III K07749 GO:0003674,GO:0003824,GO:0008410,GO:0016740,GO:0016782,GO:0047369 2.8.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000258 482.0
HKD3_k127_9150492_4 Short-chain dehydrogenase reductase SDR K08679 - 5.1.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003403 434.0
HKD3_k127_9150492_5 cyclopropane-fatty-acyl-phospholipid synthase K00574 - 2.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009747 440.0
HKD3_k127_9150492_6 PhoQ Sensor K07682 GO:0000166,GO:0000287,GO:0001666,GO:0003032,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0005488,GO:0005509,GO:0005524,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0009593,GO:0009628,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0017076,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0019825,GO:0019826,GO:0020037,GO:0030312,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0036211,GO:0036293,GO:0040007,GO:0042165,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0046777,GO:0046872,GO:0046906,GO:0048037,GO:0050896,GO:0051606,GO:0051775,GO:0051776,GO:0070025,GO:0070026,GO:0070482,GO:0070483,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 413.0
HKD3_k127_9150492_7 translation release factor activity K03265 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006138 393.0
HKD3_k127_9150492_8 domain, Protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000297 386.0
HKD3_k127_9150492_9 L-asparaginase II K01424 - 3.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000546 366.0
HKD3_k127_9166818_0 Beta-Casp domain K07576 - - 4.964e-195 618.0
HKD3_k127_9166818_1 Polyphosphate kinase 2 (PPK2) K22468 - 2.7.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001834 437.0
HKD3_k127_9166818_2 helix_turn_helix, Lux Regulon K14979 - - 0.00000000000000000000000000000000000004853 146.0
HKD3_k127_9252986_0 PFAM peptidase S9 prolyl oligopeptidase active site domain protein - - - 5.874e-294 915.0
HKD3_k127_9252986_1 Glycogen debranching enzyme, glucanotransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005826 440.0
HKD3_k127_9252986_10 Flavin containing amine oxidoreductase - - - 0.0000000000000000001276 103.0
HKD3_k127_9252986_11 response to abiotic stimulus K01971,K03086,K06867,K06886 GO:0003674,GO:0003779,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0006996,GO:0007010,GO:0007015,GO:0008092,GO:0008150,GO:0009987,GO:0016043,GO:0022607,GO:0030029,GO:0030036,GO:0042802,GO:0042803,GO:0043933,GO:0044085,GO:0044877,GO:0046983,GO:0051015,GO:0051259,GO:0065003,GO:0071840,GO:0097435 6.5.1.1 0.000000000000000007756 91.0
HKD3_k127_9252986_12 Acetyltransferase (GNAT) family - - - 0.00004963 53.0
HKD3_k127_9252986_2 ATPase activity K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006892 386.0
HKD3_k127_9252986_3 Methyladenine glycosylase K01246 - 3.2.2.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001258 275.0
HKD3_k127_9252986_4 TIGRFAM geranylgeranyl reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001745 256.0
HKD3_k127_9252986_5 PFAM alpha beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000081 240.0
HKD3_k127_9252986_6 Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000000000000000000000000000000000000002745 220.0
HKD3_k127_9252986_7 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.000000000000000000000000000000000006692 143.0
HKD3_k127_9252986_8 Pfam:DUF422 K08977 - 4.2.1.161 0.000000000000000000000000000000000006942 147.0
HKD3_k127_9252986_9 enzyme binding K00567,K07443 - 2.1.1.63 0.000000000000000000005728 97.0
HKD3_k127_9372628_0 lactate racemase activity K22373 - 5.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002401 477.0
HKD3_k127_9372628_1 tagaturonate epimerase K21619 - 5.1.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005237 337.0
HKD3_k127_9372628_2 PFAM short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003556 316.0
HKD3_k127_9372628_3 alcohol dehydrogenase K00008 - 1.1.1.14 0.0000000000000000000000000000000000000000000000000002229 194.0
HKD3_k127_9431111_0 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 5.886e-290 903.0
HKD3_k127_9431111_1 Protein of unknown function, DUF255 K06888 - - 2.545e-211 677.0
HKD3_k127_9431111_10 PFAM Hemerythrin HHE cation binding domain protein - - - 0.00000000000000000000000000000000003916 140.0
HKD3_k127_9431111_11 Pyridoxamine 5'-phosphate oxidase - - - 0.0000000000000000000000000000002798 128.0
HKD3_k127_9431111_12 FR47-like protein - - - 0.000000000000000000007383 99.0
HKD3_k127_9431111_13 GNAT acetyltransferase - - - 0.0000000000000000003705 96.0
HKD3_k127_9431111_2 PFAM glycosidase PH1107-related K18785,K20885 - 2.4.1.319,2.4.1.320,2.4.1.339,2.4.1.340 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001597 527.0
HKD3_k127_9431111_3 Binding-protein-dependent transport system inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006353 521.0
HKD3_k127_9431111_4 Bacterial protein of unknown function (DUF885) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003352 513.0
HKD3_k127_9431111_5 COGs COG1173 ABC-type dipeptide oligopeptide nickel transport systems permease components - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000495 425.0
HKD3_k127_9431111_6 PFAM metal-dependent phosphohydrolase, HD sub domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001953 360.0
HKD3_k127_9431111_7 periplasmic binding protein LacI transcriptional regulator K02529 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005185 287.0
HKD3_k127_9431111_8 X-Pro dipeptidyl-peptidase (S15 family) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000159 267.0
HKD3_k127_9431111_9 Phospholipid methyltransferase - - - 0.0000000000000000000000000000000000000000000006607 171.0
HKD3_k127_9454801_0 PFAM Bile acid sodium symporter K03325 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004584 534.0
HKD3_k127_9454801_1 Belongs to the glycosyl hydrolase 30 family K01201 - 3.2.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 488.0
HKD3_k127_9454801_2 ROK family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003027 402.0
HKD3_k127_9454801_3 Calcineurin-like phosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007519 275.0
HKD3_k127_9454801_4 carbohydrate transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001052 266.0
HKD3_k127_9454801_5 - - - - 0.000000000000000000000000000000008525 149.0
HKD3_k127_9454801_6 Putative Fe-S cluster - - - 0.00000000000000000000000001734 115.0
HKD3_k127_9454801_7 TIGRFAM redox-active disulfide protein 2 - - - 0.0000000000000000004721 87.0
HKD3_k127_9533522_0 PFAM Transketolase central region K00162,K11381,K21417 - 1.2.4.1,1.2.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002684 553.0
HKD3_k127_9533522_1 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005631 453.0
HKD3_k127_9533522_2 Catalytic domain of components of various dehydrogenase complexes K00627 - 2.3.1.12 0.00000001381 57.0
HKD3_k127_9533522_3 Putative membrane peptidase family (DUF2324) - - - 0.0000006808 53.0
HKD3_k127_961858_0 Endoribonuclease that initiates mRNA decay K18682 - - 8.797e-220 691.0
HKD3_k127_961858_1 Bacterial extracellular solute-binding protein K02020 - - 0.000000000000000000000000000000000000000000000000000000000000000000158 239.0
HKD3_k127_961858_2 COGs COG0491 Zn-dependent hydrolase including glyoxylase - - - 0.000000000000000000000000000000000000000000000000000002031 198.0
HKD3_k127_961858_3 Modulates RecA activity K03565 - - 0.000000000000000000000000000000000000000000000002329 181.0
HKD3_k127_961858_4 PFAM transcriptional regulator PadR family protein - - - 0.00000000000000000000000000000000004228 141.0
HKD3_k127_961858_5 Binding-protein-dependent transport system inner membrane component K02018 - - 0.0000000000000000000002908 100.0