LYD1_k127_1058024_0
TPM domain
K06872
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001737
286.0
View
LYD1_k127_1058024_1
PFAM LemA family protein
K03744
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000007553
256.0
View
LYD1_k127_1058024_2
Pfam:TPM
K08988
-
-
0.000000000000000000000000000000000000000000000000000000000002353
222.0
View
LYD1_k127_1058024_3
Gaf domain
K02488
-
2.7.7.65
0.000000000000000000000000002724
121.0
View
LYD1_k127_1064200_0
ABC transporter
K06020
-
3.6.3.25
2.622e-310
956.0
View
LYD1_k127_1064200_1
ABC transporter C-terminal domain
K15738
-
-
3.003e-232
734.0
View
LYD1_k127_1064200_10
Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer)
K01613
-
4.1.1.65
0.0000000000000000000000000000000000000000000000000000001574
201.0
View
LYD1_k127_1064200_11
6-carboxyhexanoate--CoA ligase
K01906
-
6.2.1.14
0.000000000000000000000000000000000000000000000002371
183.0
View
LYD1_k127_1064200_12
DsrE/DsrF-like family
K06039
-
-
0.0000000000000000000000000000000000000009414
149.0
View
LYD1_k127_1064200_13
Belongs to the acylphosphatase family
K01512
GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818
3.6.1.7
0.0000000000000000000000000001887
117.0
View
LYD1_k127_1064200_14
Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
K02454,K02652
-
-
0.0000000000000000000000001489
115.0
View
LYD1_k127_1064200_15
DNA-binding transcription factor activity
K03655,K03892,K21903
-
3.6.4.12
0.00000000000000000007057
93.0
View
LYD1_k127_1064200_16
MMPL family
K07003
-
-
0.00000000000001773
77.0
View
LYD1_k127_1064200_17
Domain of unknown function (DUF4388)
-
-
-
0.00000000005611
63.0
View
LYD1_k127_1064200_18
DNA-binding transcription factor activity
K03655,K03892,K21903
-
3.6.4.12
0.00000000007469
64.0
View
LYD1_k127_1064200_19
sulfur relay protein TusB DsrH
K07237
-
-
0.0000002969
55.0
View
LYD1_k127_1064200_2
Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
K00053
-
1.1.1.86
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003829
548.0
View
LYD1_k127_1064200_20
Belongs to the DsrF TusC family
K07236
-
-
0.00008729
50.0
View
LYD1_k127_1064200_21
DsrE/DsrF-like family
K07235
-
-
0.0002427
46.0
View
LYD1_k127_1064200_3
Pyridine nucleotide-disulphide oxidoreductase
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002686
523.0
View
LYD1_k127_1064200_4
Pyridine nucleotide-disulphide oxidoreductase
K17218
-
1.8.5.4
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004412
464.0
View
LYD1_k127_1064200_5
Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
K01012
-
2.8.1.6
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003165
333.0
View
LYD1_k127_1064200_6
Methylenetetrahydrofolate reductase
K00297
-
1.5.1.20
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002486
331.0
View
LYD1_k127_1064200_7
Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
K00566
-
2.8.1.13
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007781
325.0
View
LYD1_k127_1064200_8
Methylene-tetrahydrofolate reductase C terminal
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006645
287.0
View
LYD1_k127_1064200_9
Diacylglycerol kinase catalytic domain
-
-
-
0.000000000000000000000000000000000000000000000000000000000001694
220.0
View
LYD1_k127_1080700_0
tRNA-splicing ligase RtcB
K14415
-
6.5.1.3
8.649e-217
682.0
View
LYD1_k127_1080700_1
Dolichyl-phosphate-mannose-protein mannosyltransferase
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005546
458.0
View
LYD1_k127_1080700_2
-
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005518
380.0
View
LYD1_k127_1080700_3
Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2)
K11782
-
4.2.1.151
0.000000000000000000000000000000000000000000000000000000000001336
218.0
View
LYD1_k127_1080700_4
PFAM Archease protein family (DUF101 UPF0211)
-
-
-
0.0000000000000000000000000000000009656
134.0
View
LYD1_k127_1080700_5
PFAM glycosyl transferase, family 35
K00688
-
2.4.1.1
0.0000000000000000007561
89.0
View
LYD1_k127_1080700_6
transferase activity, transferring glycosyl groups
-
-
-
0.000000001134
65.0
View
LYD1_k127_1080700_7
-
-
-
-
0.000005084
54.0
View
LYD1_k127_1083926_0
FtsX-like permease family
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002809
307.0
View
LYD1_k127_1083926_1
membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides
K02003
-
-
0.000000000000000000000000001436
115.0
View
LYD1_k127_1083926_2
Acetyltransferase (GNAT) domain
-
-
-
0.000000000000000002584
90.0
View
LYD1_k127_117605_0
binding domain, Protein
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002382
366.0
View
LYD1_k127_117605_1
Transposase IS200 like
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002334
327.0
View
LYD1_k127_117605_10
Histidine kinase
K02660,K11525
-
-
0.000213
54.0
View
LYD1_k127_117605_2
GAF domain
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101
338.0
View
LYD1_k127_117605_3
TIGRFAM riboflavin biosynthesis protein RibF
K11753
-
2.7.1.26,2.7.7.2
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000189
293.0
View
LYD1_k127_117605_5
mRNA catabolic process
-
-
-
0.00000000000000000000000000000000000000000004179
170.0
View
LYD1_k127_117605_6
Adenylylsulphate kinase
K00860
-
2.7.1.25
0.00000000000000000000000000000000000000298
152.0
View
LYD1_k127_117605_7
-
-
-
-
0.0000000000000000000000000000000000006182
144.0
View
LYD1_k127_117605_8
Diguanylate cyclase
-
-
-
0.0000000000000000005506
102.0
View
LYD1_k127_117605_9
GAF domain
-
-
-
0.0000000000000001094
94.0
View
LYD1_k127_121468_0
transporter antisigma-factor antagonist STAS
K03321
-
-
7.153e-219
693.0
View
LYD1_k127_121468_1
amine dehydrogenase activity
K15864,K19345
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464
1.7.2.1,1.7.99.1
0.0000000000000000000000000000000000000000000000000000000000000000005923
243.0
View
LYD1_k127_121468_2
-
-
-
-
0.00000000000000000000000000000000000000000000005013
179.0
View
LYD1_k127_1223309_0
Alpha-glucan water dikinase
K08244
GO:0000272,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005975,GO:0005976,GO:0005982,GO:0005983,GO:0006073,GO:0006793,GO:0006796,GO:0006950,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009251,GO:0009266,GO:0009409,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009605,GO:0009607,GO:0009608,GO:0009610,GO:0009620,GO:0009628,GO:0009631,GO:0009941,GO:0009987,GO:0016052,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016781,GO:0031967,GO:0031975,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044042,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044260,GO:0044262,GO:0044264,GO:0044275,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0050521,GO:0050896,GO:0051704,GO:0051707,GO:0071704,GO:1901575
2.7.9.4
1.167e-231
752.0
View
LYD1_k127_1223309_1
Phosphoglucan, water dikinase
K15535
GO:0000272,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0005976,GO:0005982,GO:0005983,GO:0006073,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009251,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016052,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016781,GO:0019200,GO:0019538,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044042,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044260,GO:0044262,GO:0044264,GO:0044267,GO:0044275,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046777,GO:0046835,GO:0051752,GO:0071704,GO:1901564,GO:1901575
2.7.9.5
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004531
463.0
View
LYD1_k127_1223309_2
Pyridoxal-phosphate dependent enzyme
K01738
-
2.5.1.47
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002721
374.0
View
LYD1_k127_1223309_3
PFAM sigma-54 factor interaction domain-containing protein
K02584
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005933
329.0
View
LYD1_k127_1223309_4
EamA-like transporter family
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000001131
281.0
View
LYD1_k127_1223309_5
superoxide reductase activity
K05919
-
1.15.1.2
0.00000000000000000000000000000000000000000000000000000000000003348
218.0
View
LYD1_k127_1223309_6
redox protein, regulator of disulfide bond formation
-
-
-
0.00000000000000000000000000000000000000000000000001912
185.0
View
LYD1_k127_1223309_7
Xylose isomerase-like TIM barrel
-
-
-
0.00004932
57.0
View
LYD1_k127_1223309_8
phosphorelay signal transduction system
-
-
-
0.00009372
53.0
View
LYD1_k127_1223309_9
-
K07092
-
-
0.0003288
48.0
View
LYD1_k127_123700_0
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
K15778
-
5.4.2.2,5.4.2.8
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002339
520.0
View
LYD1_k127_123700_1
Polysaccharide biosynthesis protein
K01784
-
5.1.3.2
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006157
413.0
View
LYD1_k127_123700_2
PFAM Glycosyl transferase family 4
K02851
-
2.7.8.33,2.7.8.35
0.0000000000000000000000002531
115.0
View
LYD1_k127_123700_3
Domain of unknown function (DUF296)
-
-
-
0.0000000000007216
68.0
View
LYD1_k127_123700_4
Dolichyl-phosphate-mannose-protein mannosyltransferase
-
-
-
0.0000001982
64.0
View
LYD1_k127_1239008_0
Galactose-1-phosphate uridyl transferase, N-terminal domain
K00965
-
2.7.7.12
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004793
534.0
View
LYD1_k127_1239008_1
Synthesizes alpha-1,4-glucan chains using ADP-glucose
K00703
GO:0003674,GO:0003824,GO:0016740,GO:0016757
2.4.1.21
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008322
428.0
View
LYD1_k127_1239008_2
GAF domain
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006093
424.0
View
LYD1_k127_1239008_3
tRNA 3'-trailer cleavage
K00784
-
3.1.26.11
0.00000000000000000000000000000000000000000000000000000000000000000005171
239.0
View
LYD1_k127_127950_0
CoA binding domain
K09181
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005981
515.0
View
LYD1_k127_127950_1
e3 binding domain
K00627
-
2.3.1.12
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003726
483.0
View
LYD1_k127_127950_10
TraB family
K09973
-
-
0.0000000000000000000000000000000000000000000000001074
190.0
View
LYD1_k127_127950_11
MlaD protein
K02067
-
-
0.0000000000000000000000000000000000000000000000002118
180.0
View
LYD1_k127_127950_12
intermembrane phospholipid transfer
K07323
-
-
0.0000000000000000000000000000000000000000000000002354
183.0
View
LYD1_k127_127950_13
-
-
-
-
0.0000001901
54.0
View
LYD1_k127_127950_2
Transketolase, pyrimidine binding domain
K00162,K00167
-
1.2.4.1,1.2.4.4
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009997
466.0
View
LYD1_k127_127950_3
Dehydrogenase E1 component
K00161,K00166
-
1.2.4.1,1.2.4.4
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008472
441.0
View
LYD1_k127_127950_4
Permease MlaE
K02066
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002466
356.0
View
LYD1_k127_127950_5
AAA domain, putative AbiEii toxin, Type IV TA system
K02065
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008684
323.0
View
LYD1_k127_127950_6
CDP-alcohol phosphatidyltransferase
K17103
-
2.7.8.8
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000673
280.0
View
LYD1_k127_127950_7
Metallo-beta-lactamase superfamily
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000006659
250.0
View
LYD1_k127_127950_8
PFAM VacJ family lipoprotein
K04754
-
-
0.0000000000000000000000000000000000000000000000000000000000003964
220.0
View
LYD1_k127_127950_9
methyltransferase
-
-
-
0.000000000000000000000000000000000000000000000000000000000001494
217.0
View
LYD1_k127_1287240_0
Putative neutral zinc metallopeptidase
K07054
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003651
421.0
View
LYD1_k127_1287240_1
protein with SCP PR1 domains
-
-
-
0.000000000000000000000000000000000000001962
155.0
View
LYD1_k127_1287240_2
acetyltransferase
K00661
-
2.3.1.79
0.0000002059
61.0
View
LYD1_k127_135731_0
Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
K03296,K07788,K07789,K18138
-
-
0.0
1445.0
View
LYD1_k127_135731_1
Biotin-lipoyl like
K07799
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007896
388.0
View
LYD1_k127_135731_2
cheY-homologous receiver domain
-
-
-
0.000000000000000000002044
98.0
View
LYD1_k127_136065_0
TIGRFAM glutamine synthetase, type I
K01915
-
6.3.1.2
2.105e-231
723.0
View
LYD1_k127_136065_1
5-formyltetrahydrofolate cyclo-ligase activity
K07137
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001492
604.0
View
LYD1_k127_136065_10
Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
K07568
GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659
2.4.99.17
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031
322.0
View
LYD1_k127_136065_11
Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
K03787
-
3.1.3.5
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008129
299.0
View
LYD1_k127_136065_12
helix_turn_helix, Lux Regulon
K02282,K07689
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002696
296.0
View
LYD1_k127_136065_13
Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
K00573
GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564
2.1.1.77
0.000000000000000000000000000000000000000000000000000000000000000000000000000008136
265.0
View
LYD1_k127_136065_14
Stage II sporulation protein
K06381
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000001885
271.0
View
LYD1_k127_136065_15
Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate
K03271
-
5.3.1.28
0.00000000000000000000000000000000000000000000000000000000000000000000000000002414
263.0
View
LYD1_k127_136065_16
Glutamine amidotransferase class-I
K01951
-
6.3.5.2
0.000000000000000000000000000000000000000000000000000000000000000000000001635
252.0
View
LYD1_k127_136065_17
Histidine kinase
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000001923
269.0
View
LYD1_k127_136065_18
queuosine biosynthetic process
K03470,K09765
-
1.17.99.6,3.1.26.4
0.00000000000000000000000000000000000000000000000000000000000000002468
228.0
View
LYD1_k127_136065_19
The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
K03550
-
3.6.4.12
0.000000000000000000000000000000000000000000000000000000000004584
214.0
View
LYD1_k127_136065_2
Argininosuccinate lyase C-terminal
K01755
-
4.3.2.1
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001675
587.0
View
LYD1_k127_136065_20
Diacylglycerol kinase
K00887,K00901
-
2.7.1.107,2.7.1.66
0.0000000000000000000000000000000000000000000000000000001635
202.0
View
LYD1_k127_136065_21
Transglutaminase/protease-like homologues
-
-
-
0.000000000000000000000000000000000000000000000000000002065
213.0
View
LYD1_k127_136065_22
Belongs to the P(II) protein family
K04751
-
-
0.000000000000000000000000000000000000000000000000000008216
190.0
View
LYD1_k127_136065_23
Protein of unknown function DUF58
-
-
-
0.000000000000000000000000000000000000000000000228
180.0
View
LYD1_k127_136065_24
Rhodanese Homology Domain
K01011
-
2.8.1.1,2.8.1.2
0.000000000000000000000000000000000000000002772
168.0
View
LYD1_k127_136065_25
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
-
-
-
0.00000000000000000000000000000000000000002572
174.0
View
LYD1_k127_136065_26
Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
-
-
-
0.0000000000000000000000000001072
134.0
View
LYD1_k127_136065_27
Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
K01159
GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576
3.1.22.4
0.000000000000000000000000001525
117.0
View
LYD1_k127_136065_28
Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
K07042
-
-
0.00000000000000000001009
98.0
View
LYD1_k127_136065_29
Protein of unknown function (DUF2905)
-
-
-
0.00000000000000000006758
93.0
View
LYD1_k127_136065_3
family UPF0324
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005521
582.0
View
LYD1_k127_136065_30
Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
-
-
-
0.0000000002008
61.0
View
LYD1_k127_136065_31
Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
-
-
-
0.0000000007749
64.0
View
LYD1_k127_136065_33
It is involved in the biological process described with protein phosphorylation
K12567
GO:0003008,GO:0003012,GO:0003674,GO:0003779,GO:0003824,GO:0004672,GO:0004674,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0005859,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007010,GO:0007015,GO:0007498,GO:0007610,GO:0007626,GO:0008092,GO:0008150,GO:0008152,GO:0008307,GO:0008344,GO:0009636,GO:0009653,GO:0009888,GO:0009987,GO:0010638,GO:0010720,GO:0010927,GO:0015629,GO:0016043,GO:0016301,GO:0016310,GO:0016459,GO:0016460,GO:0016740,GO:0016772,GO:0016773,GO:0018105,GO:0018107,GO:0018193,GO:0018209,GO:0018210,GO:0019538,GO:0019899,GO:0019900,GO:0019901,GO:0022603,GO:0022607,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030036,GO:0030154,GO:0030239,GO:0030534,GO:0031032,GO:0031033,GO:0031034,GO:0031430,GO:0031672,GO:0031674,GO:0032501,GO:0032502,GO:0032956,GO:0032970,GO:0032989,GO:0032991,GO:0033043,GO:0034622,GO:0035094,GO:0035095,GO:0036211,GO:0040012,GO:0040017,GO:0042221,GO:0042493,GO:0042692,GO:0042805,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043292,GO:0043412,GO:0043933,GO:0044057,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044449,GO:0044464,GO:0044877,GO:0045214,GO:0045595,GO:0045597,GO:0045933,GO:0045989,GO:0048468,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051015,GO:0051094,GO:0051128,GO:0051130,GO:0051146,GO:0051147,GO:0051149,GO:0051153,GO:0051155,GO:0051239,GO:0051240,GO:0051302,GO:0051371,GO:0051393,GO:0051493,GO:0051495,GO:0051782,GO:0055001,GO:0055002,GO:0060284,GO:0060297,GO:0060298,GO:0061061,GO:0065003,GO:0065007,GO:0070925,GO:0071688,GO:0071689,GO:0071704,GO:0071840,GO:0090257,GO:0097435,GO:0097493,GO:0099080,GO:0099081,GO:0099512,GO:0110020,GO:0140096,GO:1901564,GO:1902115,GO:1902117,GO:1902903,GO:1902905
2.7.11.1
0.0007921
51.0
View
LYD1_k127_136065_4
GAF domain
K02584
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003124
548.0
View
LYD1_k127_136065_5
Trypsin
K04771
-
3.4.21.107
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009713
499.0
View
LYD1_k127_136065_6
7TM receptor with intracellular HD hydrolase
K07037
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005658
496.0
View
LYD1_k127_136065_7
The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
K03551
-
3.6.4.12
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023
452.0
View
LYD1_k127_136065_8
PhoH-like protein
K06217
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002551
391.0
View
LYD1_k127_136065_9
ATPase family associated with various cellular activities (AAA)
K03924
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001826
344.0
View
LYD1_k127_1370872_0
The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
K03701
-
-
0.0
1026.0
View
LYD1_k127_1370872_1
Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
K00573
-
2.1.1.77
0.000000000000000000000000000000000000000000000000000000000000000000000000000000085
273.0
View
LYD1_k127_1370872_2
Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
K03734
-
2.7.1.180
0.0000000000000000000000000000000000000000000000000000000000000000000006159
251.0
View
LYD1_k127_1370872_3
Heptaprenyl diphosphate synthase component I
K00805
-
2.5.1.30
0.0000000000000000000000000000000001204
141.0
View
LYD1_k127_1370872_4
spermidine synthase activity
-
-
-
0.00000000000000000000000000005978
124.0
View
LYD1_k127_1370872_5
NusG domain II
K00805
-
2.5.1.30
0.000000000000000001203
90.0
View
LYD1_k127_1370872_6
Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
K09862
-
-
0.000000000000000007452
84.0
View
LYD1_k127_1370872_7
Cytochrome c
K12263
-
-
0.0000000000000001945
85.0
View
LYD1_k127_1370872_8
Protein of unknown function (DUF1573)
-
-
-
0.00003002
48.0
View
LYD1_k127_1371798_0
Pyruvate phosphate dikinase, PEP/pyruvate binding domain
K01007
-
2.7.9.2
1.237e-198
647.0
View
LYD1_k127_1371798_1
Type II secretion system (T2SS), protein E, N-terminal domain
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005226
465.0
View
LYD1_k127_1371798_10
PFAM ABC transporter related
K02003
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001708
293.0
View
LYD1_k127_1371798_11
histidine kinase HAMP region domain protein
K02482
-
2.7.13.3
0.000000000000000000000000000000000000000000000000000000000000005286
236.0
View
LYD1_k127_1371798_12
Cupin domain
-
-
-
0.0000000000000000000000000000000000000000000000000000001036
199.0
View
LYD1_k127_1371798_13
Putative transmembrane protein (Alph_Pro_TM)
-
-
-
0.000000000000000000000000000000000000000000000004866
182.0
View
LYD1_k127_1371798_14
PFAM response regulator receiver
-
-
-
0.000000000000000000000000000000000000000000003917
166.0
View
LYD1_k127_1371798_15
Glycosyl transferase, family 2
-
-
-
0.0000000000000000000000000000000000001767
154.0
View
LYD1_k127_1371798_16
COG0589 Universal stress protein UspA and related nucleotide-binding proteins
-
-
-
0.000000000000000000000000000001132
132.0
View
LYD1_k127_1371798_17
-
-
-
-
0.00000000000000000000000000002426
125.0
View
LYD1_k127_1371798_18
Predicted membrane protein (DUF2318)
-
-
-
0.000000000000000000000000921
111.0
View
LYD1_k127_1371798_19
Domain of unknown function (DUF4382)
-
-
-
0.0000000000000000001163
94.0
View
LYD1_k127_1371798_2
Sulfite exporter TauE/SafE
K07090
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004613
427.0
View
LYD1_k127_1371798_20
COG0589 Universal stress protein UspA and related nucleotide-binding proteins
-
-
-
0.0000000001331
68.0
View
LYD1_k127_1371798_21
Domain of unknown function (DUF4382)
-
-
-
0.0002336
46.0
View
LYD1_k127_1371798_3
Sigma-54 interaction domain
K07714
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005517
428.0
View
LYD1_k127_1371798_4
histidine kinase HAMP region domain protein
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175
415.0
View
LYD1_k127_1371798_6
Iron-sulfur cluster-binding domain
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001906
358.0
View
LYD1_k127_1371798_7
FtsX-like permease family
K02004
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001996
355.0
View
LYD1_k127_1371798_8
Type II secretion system (T2SS), protein E, N-terminal domain
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000575
358.0
View
LYD1_k127_1371798_9
Carbon-nitrogen hydrolase
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009703
338.0
View
LYD1_k127_137907_0
Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
K01703
-
4.2.1.33,4.2.1.35
5.118e-225
702.0
View
LYD1_k127_137907_1
signal transduction protein containing a membrane domain an EAL and a GGDEF domain
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006047
449.0
View
LYD1_k127_137907_10
Transcriptional regulator
-
-
-
0.00000000000000000000000000000000000000000000000000000004667
206.0
View
LYD1_k127_137907_11
PFAM Endoribonuclease L-PSP
-
-
-
0.0000000000000000000000000000000000000000000001669
171.0
View
LYD1_k127_137907_12
PFAM aminotransferase class I and II
K04720
-
4.1.1.81
0.0000000000000000000000000000000000000000003192
171.0
View
LYD1_k127_137907_13
Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
K09747
-
-
0.00000000000000000000000000000000000001977
147.0
View
LYD1_k127_137907_14
SWI complex, BAF60b domains
-
-
-
0.000000000000000000000000000005081
121.0
View
LYD1_k127_137907_15
Belongs to the universal stress protein A family
-
-
-
0.000000000000000000000000004146
117.0
View
LYD1_k127_137907_17
PFAM Lytic transglycosylase catalytic
-
-
-
0.0000000001614
70.0
View
LYD1_k127_137907_18
Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
K01883,K02533,K08281,K15396
-
2.1.1.200,3.5.1.19,6.1.1.16
0.000000001557
60.0
View
LYD1_k127_137907_19
Protein of unknown function (DUF2934)
-
-
-
0.0000002071
58.0
View
LYD1_k127_137907_2
DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
K02343
-
2.7.7.7
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004832
386.0
View
LYD1_k127_137907_3
serine threonine protein kinase
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132
329.0
View
LYD1_k127_137907_4
Nitroreductase family
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000006864
258.0
View
LYD1_k127_137907_5
Yip1 domain
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000004062
243.0
View
LYD1_k127_137907_6
Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
K01704
-
4.2.1.33,4.2.1.35
0.000000000000000000000000000000000000000000000000000000000000000000001793
243.0
View
LYD1_k127_137907_8
Protein of unknown function (DUF815)
K06923
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000139
243.0
View
LYD1_k127_137907_9
May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
K06187
-
-
0.000000000000000000000000000000000000000000000000000000000000000002568
231.0
View
LYD1_k127_1400166_0
Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
-
-
-
0.0
1294.0
View
LYD1_k127_1400166_1
Molybdopterin oxidoreductase Fe4S4 domain
K00336
-
1.6.5.3
0.0
1225.0
View
LYD1_k127_1400166_10
GDP-mannose 4,6 dehydratase
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007019
425.0
View
LYD1_k127_1400166_11
Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
K03086
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002
405.0
View
LYD1_k127_1400166_12
NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008487
384.0
View
LYD1_k127_1400166_13
YmdB-like protein
K09769
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002145
342.0
View
LYD1_k127_1400166_14
Glycosyltransferase family 9 (heptosyltransferase)
K02841,K02843
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006529
328.0
View
LYD1_k127_1400166_16
Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
K01775
-
5.1.1.1
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006206
323.0
View
LYD1_k127_1400166_17
NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
K00338
GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0030964,GO:0032991,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204
1.6.5.3
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006299
312.0
View
LYD1_k127_1400166_18
Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205
312.0
View
LYD1_k127_1400166_19
COGs COG0463 Glycosyltransferase involved in cell wall biogenesis
K20534
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002441
282.0
View
LYD1_k127_1400166_2
NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein
K00341
-
1.6.5.3
3.505e-240
763.0
View
LYD1_k127_1400166_20
PFAM NADH-ubiquinone plastoquinone oxidoreductase chain 6
K00339
-
1.6.5.3
0.000000000000000000000000000000000000000000000000001983
188.0
View
LYD1_k127_1400166_21
PFAM Carboxymuconolactone decarboxylase
-
-
-
0.00000000000000000000000000000000001131
138.0
View
LYD1_k127_1400166_22
NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
K00340
GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204
1.6.5.3
0.0000000000000000000000000000000006772
141.0
View
LYD1_k127_1400166_23
-
-
-
-
0.00000000000000000000000001561
112.0
View
LYD1_k127_1400166_24
Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system
K03116
-
-
0.000000000000000000009227
93.0
View
LYD1_k127_1400166_25
FecR protein
-
-
-
0.000000000000000009543
93.0
View
LYD1_k127_1400166_26
C-terminal four TMM region of protein-O-mannosyltransferase
-
-
-
0.0000000000003734
82.0
View
LYD1_k127_1400166_27
Tetratricopeptide repeat
-
-
-
0.000000003741
69.0
View
LYD1_k127_1400166_29
-
-
-
-
0.000001381
54.0
View
LYD1_k127_1400166_3
Endoribonuclease that initiates mRNA decay
K18682
-
-
5.319e-208
662.0
View
LYD1_k127_1400166_30
PKD domain
-
-
-
0.0002065
53.0
View
LYD1_k127_1400166_31
reverse transcriptase
-
-
-
0.0003365
45.0
View
LYD1_k127_1400166_4
NADH-quinone oxidoreductase, chain M
K00342
-
1.6.5.3
6.66e-199
635.0
View
LYD1_k127_1400166_5
NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007371
494.0
View
LYD1_k127_1400166_6
NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
K00343
-
1.6.5.3
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004239
497.0
View
LYD1_k127_1400166_7
Glycosyltransferase family 9 (heptosyltransferase)
K02843
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479
494.0
View
LYD1_k127_1400166_8
Belongs to the UDP-glucose GDP-mannose dehydrogenase family
K00012,K00066,K02472,K02474,K13015
-
1.1.1.132,1.1.1.136,1.1.1.22,1.1.1.336
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004204
467.0
View
LYD1_k127_1400166_9
AAA ATPase
K07478
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001233
452.0
View
LYD1_k127_1401087_0
PFAM NADH Ubiquinone plastoquinone (complex I)
-
-
-
3.39e-196
632.0
View
LYD1_k127_1401087_1
NADH Ubiquinone plastoquinone (Complex I)
K12141
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000191
620.0
View
LYD1_k127_1401087_2
NADH dehydrogenase
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003724
340.0
View
LYD1_k127_1401087_3
Respiratory-chain NADH dehydrogenase, 49 Kd subunit
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000005861
271.0
View
LYD1_k127_1401087_4
hydrogenase 4 membrane
K12140
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000005001
244.0
View
LYD1_k127_1401087_5
Ribosomal protein S1-like RNA-binding domain
K02945
-
-
0.00000000000006836
74.0
View
LYD1_k127_1401087_6
-
-
-
-
0.0000002514
55.0
View
LYD1_k127_1421313_0
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002174
592.0
View
LYD1_k127_1421313_1
ATPase, P-type (transporting), HAD superfamily, subfamily IC
K01537
-
3.6.3.8
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002252
464.0
View
LYD1_k127_1421313_10
-
-
-
-
0.0000000000003655
72.0
View
LYD1_k127_1421313_2
Protein of unknown function (DUF3443)
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006855
418.0
View
LYD1_k127_1421313_3
Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
K04066
GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006270,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0034645,GO:0042623,GO:0043138,GO:0043140,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000003811
288.0
View
LYD1_k127_1421313_4
prenyltransferase activity
K03186,K16875
GO:0003674,GO:0003824,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008694,GO:0009058,GO:0009108,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663
2.5.1.129
0.0000000000000000000000000000000000000000000000000000000001424
210.0
View
LYD1_k127_1421313_5
UbiA prenyltransferase family
K03179
-
2.5.1.39
0.0000000000000000000000000000000000000000000000000000006101
196.0
View
LYD1_k127_1421313_6
Protein of unknown function (DUF2844)
-
-
-
0.000000000000000000000000000000000000000000005605
167.0
View
LYD1_k127_1421313_7
Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
K00859
-
2.7.1.24
0.0000000000000000000000000000000000000000000571
170.0
View
LYD1_k127_1421313_8
NMT1/THI5 like
K02051
-
-
0.000000000000000000000000000000000003137
150.0
View
LYD1_k127_1421313_9
PFAM Cold-shock protein DNA-binding
K03704
-
-
0.000000000000000000000005153
104.0
View
LYD1_k127_1421361_0
that it carries out the mismatch recognition step. This protein has a weak ATPase activity
K03555
GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391
-
3.103e-279
882.0
View
LYD1_k127_1421361_1
Glycosyl hydrolase family 57
-
-
-
6.377e-239
760.0
View
LYD1_k127_1421361_10
Belongs to the bacterial ribosomal protein bL32 family
K02911
GO:0000027,GO:0000302,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006950,GO:0006979,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050896,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1990904
-
0.000000000000000000009463
92.0
View
LYD1_k127_1421361_11
cell cycle
K05589,K12065,K13052
-
-
0.00000000000002536
76.0
View
LYD1_k127_1421361_12
Transmembrane exosortase (Exosortase_EpsH)
-
-
-
0.0000006437
54.0
View
LYD1_k127_1421361_2
Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
K01689
-
4.2.1.11
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000754
592.0
View
LYD1_k127_1421361_3
PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase
K00382
-
1.8.1.4
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002099
488.0
View
LYD1_k127_1421361_4
Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
K00648
-
2.3.1.180
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006204
431.0
View
LYD1_k127_1421361_5
Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
K03621
-
2.3.1.15
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001972
389.0
View
LYD1_k127_1421361_6
PFAM SNARE associated Golgi protein
-
-
-
0.00000000000000000000000000000000000000007592
153.0
View
LYD1_k127_1421361_7
Uncharacterized ACR, COG1399
K07040
-
-
0.0000000000000000000000000000000000000001614
155.0
View
LYD1_k127_1421361_8
The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
K02437
-
-
0.00000000000000000000000000000000000006955
146.0
View
LYD1_k127_1421361_9
-
-
-
-
0.000000000000000000000000000000003158
145.0
View
LYD1_k127_1442575_0
proline betaine transporter
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318
503.0
View
LYD1_k127_1442575_1
An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
K03979
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008707
484.0
View
LYD1_k127_1442575_10
Protein involved in outer membrane biogenesis
-
-
-
0.00000000000000000000000000000000000000000001929
181.0
View
LYD1_k127_1442575_11
Belongs to the bacterial ribosomal protein bL27 family
K02899
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904
-
0.000000000000000000000000000000000000000008699
154.0
View
LYD1_k127_1442575_12
PFAM Dinitrogenase iron-molybdenum cofactor biosynthesis protein
-
-
-
0.0000000000000000000000000000000000000001449
156.0
View
LYD1_k127_1442575_13
Protein of unknown function DUF134
-
-
-
0.0000000000000000000000000007615
115.0
View
LYD1_k127_1442575_14
This protein binds to 23S rRNA in the presence of protein L20
K02888
-
-
0.000000000000000000000000001378
114.0
View
LYD1_k127_1442575_15
redox protein regulator of disulfide bond formation
K07397
-
-
0.00000000000000000004489
96.0
View
LYD1_k127_1442575_16
Regulatory protein, FmdB family
-
-
-
0.00000000000000004649
83.0
View
LYD1_k127_1442575_17
Belongs to the sigma-70 factor family. ECF subfamily
K03088
-
-
0.00000002137
56.0
View
LYD1_k127_1442575_18
Gram-negative bacterial TonB protein C-terminal
K03832
-
-
0.000488
48.0
View
LYD1_k127_1442575_19
TIGRFAM 40-residue YVTN family beta-propeller repeat protein
-
-
-
0.0006441
47.0
View
LYD1_k127_1442575_2
PFAM sigma-54 factor interaction domain-containing protein
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004116
426.0
View
LYD1_k127_1442575_3
MacB-like periplasmic core domain
K02004
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003053
357.0
View
LYD1_k127_1442575_4
Putative redox-active protein (C_GCAxxG_C_C)
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009266
323.0
View
LYD1_k127_1442575_5
ABC-type antimicrobial peptide transport system, permease component
K02004
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024
319.0
View
LYD1_k127_1442575_6
Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
K02005,K13888
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000785
307.0
View
LYD1_k127_1442575_7
membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides
K02003,K05685
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001696
297.0
View
LYD1_k127_1442575_8
-
-
-
-
0.00000000000000000000000000000000000000000000000000000000002071
211.0
View
LYD1_k127_1442575_9
outer membrane efflux protein
-
-
-
0.000000000000000000000000000000000000000000005586
180.0
View
LYD1_k127_1444061_0
Belongs to the sigma-70 factor family. ECF subfamily
K03088
-
-
0.000000000000000000000000000000000000000000000003059
180.0
View
LYD1_k127_1444061_2
Short C-terminal domain
K08982
-
-
0.0000002424
55.0
View
LYD1_k127_145357_0
This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
K02358
-
-
2.347e-216
674.0
View
LYD1_k127_145357_1
Belongs to the class-I aminoacyl-tRNA synthetase family
K01883
GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576
6.1.1.16
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003565
561.0
View
LYD1_k127_145357_10
Evidence 5 No homology to any previously reported sequences
-
-
-
0.00000152
50.0
View
LYD1_k127_145357_11
Zn-ribbon protein possibly nucleic acid-binding
-
GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944
-
0.000051
54.0
View
LYD1_k127_145357_2
Large family of predicted nucleotide-binding domains
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000997
332.0
View
LYD1_k127_145357_3
Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
K03218
-
2.1.1.185
0.00000000000000000000000000000000000000000000000000000000001642
215.0
View
LYD1_k127_145357_4
Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
K01770,K12506
-
2.7.7.60,4.6.1.12
0.000000000000000000000000000000000000000000000000000000007707
202.0
View
LYD1_k127_145357_5
Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
K00991
GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0050518,GO:0070567
2.7.7.60
0.0000000000000000000000000000000000000000000000000000001347
202.0
View
LYD1_k127_145357_6
arabinan catabolic process
K06113
-
3.2.1.99
0.00000000000000000000000000000000000000000000851
175.0
View
LYD1_k127_145357_7
deoxyhypusine monooxygenase activity
K05384,K05386
-
-
0.00000000000000000008651
94.0
View
LYD1_k127_145357_8
oxidoreductase activity, acting on CH-OH group of donors
-
-
-
0.00000007335
54.0
View
LYD1_k127_145357_9
-
-
-
-
0.0000001389
53.0
View
LYD1_k127_1466547_0
Cation efflux family
K16264
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001974
358.0
View
LYD1_k127_1466547_1
NMT1/THI5 like
K02051
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001727
350.0
View
LYD1_k127_1466547_2
PAS fold
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007399
330.0
View
LYD1_k127_1466547_3
Haem-binding uptake, Tiki superfamily, ChaN
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000007351
254.0
View
LYD1_k127_1466547_4
Protein of unknown function (DUF520)
K09767
-
-
0.0000000000000000000000000000000000000000000000000000001572
200.0
View
LYD1_k127_1466547_5
Histidine kinase A domain protein
-
-
-
0.0000000000000000000000000000000000000000000000000155
204.0
View
LYD1_k127_1466547_6
CO dehydrogenase acetyl-CoA synthase gamma subunit (Corrinoid Fe-S protein)
-
-
-
0.000000000000000000000000000000000000000008586
163.0
View
LYD1_k127_1466547_7
Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor
K03752
-
2.7.7.77
0.0000000000000000000000000008341
126.0
View
LYD1_k127_1466547_8
Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP)
K03637
-
4.6.1.17
0.000000000000000001004
98.0
View
LYD1_k127_1466547_9
Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
K18672
-
2.7.7.85
0.00001771
48.0
View
LYD1_k127_1484809_0
Putative S-adenosyl-L-methionine-dependent methyltransferase
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002418
310.0
View
LYD1_k127_1484809_1
PFAM CBS domain
-
-
-
0.000000000000000000000000000001319
129.0
View
LYD1_k127_1484809_2
myo-inosose-2 dehydratase activity
-
-
-
0.00000000000000000000000000002793
119.0
View
LYD1_k127_1485404_0
MacB-like periplasmic core domain
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002769
386.0
View
LYD1_k127_1485404_1
ABC transporter
K02003
-
-
0.0000000000000000000344
92.0
View
LYD1_k127_1485404_2
NosL
-
-
-
0.000000000000000002303
86.0
View
LYD1_k127_1485404_3
-
-
-
-
0.00000000000001092
77.0
View
LYD1_k127_1496246_0
Carotenoid biosynthesis protein
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000002828
262.0
View
LYD1_k127_1496246_1
Domain of unknown function (DUF3463)
-
-
-
0.000000000000000001165
86.0
View
LYD1_k127_1496246_2
Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
K01243
-
3.2.2.9
0.000000000832
68.0
View
LYD1_k127_1496441_0
Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
K03798
-
-
3.229e-295
915.0
View
LYD1_k127_1496441_1
Belongs to the 5'-nucleotidase family
K11751,K17224
-
3.1.3.5,3.6.1.45
2.795e-215
679.0
View
LYD1_k127_1496441_10
Sporulation and spore germination
-
-
-
0.00000000000002662
80.0
View
LYD1_k127_1496441_11
Transmembrane exosortase (Exosortase_EpsH)
-
-
-
0.0000000000008754
74.0
View
LYD1_k127_1496441_2
S-adenosylmethionine-dependent methyltransferase
K06969
-
2.1.1.191
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009728
370.0
View
LYD1_k127_1496441_3
Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
K00796
-
2.5.1.15
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221
355.0
View
LYD1_k127_1496441_4
Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
K00989
GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016072,GO:0016075,GO:0019439,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575
2.7.7.56
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006553
313.0
View
LYD1_k127_1496441_5
Provides the (R)-glutamate required for cell wall biosynthesis
K01776
-
5.1.1.3
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005684
307.0
View
LYD1_k127_1496441_6
Domain of unknown function (DUF4337)
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000002939
247.0
View
LYD1_k127_1496441_7
nuclease
K00590,K01174
GO:0003674,GO:0003824,GO:0004518,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:1901360,GO:1901361,GO:1901575
2.1.1.113,3.1.31.1
0.0000000000000000000000000000000000000000001443
168.0
View
LYD1_k127_1496441_8
N-Acetylmuramoyl-L-alanine amidase
K01448,K02172
-
3.5.1.28
0.000000000000000000001058
108.0
View
LYD1_k127_1496441_9
Prokaryotic dksA/traR C4-type zinc finger
K06204
-
-
0.0000000000000000001814
92.0
View
LYD1_k127_1541016_0
Acetyl-coenzyme A transporter 1
K08218
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009251
548.0
View
LYD1_k127_1541016_1
Protein of unknown function (DUF1460)
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000003102
260.0
View
LYD1_k127_1541016_2
4Fe-4S binding domain
-
-
-
0.0000000000000000000000000000000000000000000000001963
182.0
View
LYD1_k127_1560487_0
Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
K01912
-
6.2.1.30
1.139e-218
684.0
View
LYD1_k127_1560487_1
ABC transporter
K01996
-
-
0.000000000000000000000000000000000000007203
146.0
View
LYD1_k127_1561633_0
ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
K01338
-
3.4.21.53
0.0
1163.0
View
LYD1_k127_1561633_1
Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
K02346
-
2.7.7.7
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001853
462.0
View
LYD1_k127_1561633_10
Uncharacterized protein conserved in bacteria (DUF2062)
K09928
-
-
0.00000000000000000000006442
104.0
View
LYD1_k127_1561633_11
Involved in the biosynthesis of porphyrin-containing compound
-
-
-
0.000000000000000004143
85.0
View
LYD1_k127_1561633_12
DsrE/DsrF-like family
-
-
-
0.00000001203
56.0
View
LYD1_k127_1561633_2
Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12
K14441
-
2.8.4.4
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004952
445.0
View
LYD1_k127_1561633_3
Outer membrane protein transport protein (OMPP1/FadL/TodX)
K06076
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002345
370.0
View
LYD1_k127_1561633_4
Nucleotidyl transferase
K00963
-
2.7.7.9
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007138
351.0
View
LYD1_k127_1561633_5
Peptidase family M50
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624
320.0
View
LYD1_k127_1561633_6
MazG nucleotide pyrophosphohydrolase domain
K02428,K02499,K04765
GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006213,GO:0006220,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009147,GO:0009149,GO:0009151,GO:0009155,GO:0009164,GO:0009166,GO:0009199,GO:0009200,GO:0009203,GO:0009204,GO:0009208,GO:0009210,GO:0009211,GO:0009213,GO:0009215,GO:0009217,GO:0009218,GO:0009219,GO:0009222,GO:0009223,GO:0009259,GO:0009261,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042454,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0046046,GO:0046047,GO:0046051,GO:0046052,GO:0046060,GO:0046061,GO:0046070,GO:0046075,GO:0046076,GO:0046080,GO:0046081,GO:0046131,GO:0046133,GO:0046135,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658
3.6.1.66,3.6.1.9
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008
296.0
View
LYD1_k127_1561633_7
Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
K00946
-
2.7.4.16
0.0000000000000000000000000000000000000000000000000000000000000002912
233.0
View
LYD1_k127_1561633_8
rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
K07560
GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360
-
0.00000000000000000000000000000000000000000000003903
174.0
View
LYD1_k127_1561633_9
Stage II sporulation protein M
-
-
-
0.0000000000000000000000000004019
121.0
View
LYD1_k127_1561641_0
Leucyl-tRNA synthetase, Domain 2
K01869
-
6.1.1.4
0.0
1118.0
View
LYD1_k127_1561641_1
Haem-binding uptake, Tiki superfamily, ChaN
-
-
-
1.594e-206
677.0
View
LYD1_k127_1561641_11
4Fe-4S single cluster domain of Ferredoxin I
K05337
-
-
0.00000000000005675
74.0
View
LYD1_k127_1561641_12
thiamine diphosphate biosynthetic process
K03154
-
-
0.0000000000001431
74.0
View
LYD1_k127_1561641_13
DNA polymerase III, delta subunit
K02340
-
2.7.7.7
0.0000000000009521
79.0
View
LYD1_k127_1561641_14
Binds directly to 16S ribosomal RNA
K02968
-
-
0.0000000003584
64.0
View
LYD1_k127_1561641_15
DsrE/DsrF-like family
-
-
-
0.00000001203
56.0
View
LYD1_k127_1561641_2
Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
K03147
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
4.1.99.17
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185
582.0
View
LYD1_k127_1561641_3
Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
K03149
-
2.8.1.10
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002337
445.0
View
LYD1_k127_1561641_4
peptidyl-lysine modification to peptidyl-hypusine
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002359
376.0
View
LYD1_k127_1561641_5
Phosphomethylpyrimidine kinase
K00941
-
2.7.1.49,2.7.4.7
0.00000000000000000000000000000000000000000000000000000000000001156
224.0
View
LYD1_k127_1561641_6
Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
K00788
GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
2.5.1.3
0.00000000000000000000000000000000000000000000000000000001169
204.0
View
LYD1_k127_1561641_7
Adenylate kinase
-
-
-
0.00000000000000000000000000000000000000000000000006826
185.0
View
LYD1_k127_1561641_8
TIGRFAM RND efflux system, outer membrane lipoprotein, NodT family
K18903
-
-
0.00000000000000000000000000000000000000000000000008221
181.0
View
LYD1_k127_1561641_9
GAF domain
-
-
-
0.000000000000000000000000000000000000000000001268
180.0
View
LYD1_k127_1565427_0
Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
K00600
-
2.1.2.1
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006625
574.0
View
LYD1_k127_1565427_1
response regulator
K13599
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002496
377.0
View
LYD1_k127_1565427_2
Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
K07738
-
-
0.00000000000000000000000000000000000000000000000000000003688
201.0
View
LYD1_k127_1565427_3
Ribose/Galactose Isomerase
K01808
-
5.3.1.6
0.00000000000000000000000000000005019
126.0
View
LYD1_k127_1567269_0
Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid
K18235
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006559
372.0
View
LYD1_k127_1567269_1
Methyltransferase type 11
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002024
334.0
View
LYD1_k127_1567269_2
IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
K02501
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000844
279.0
View
LYD1_k127_1567269_3
Uncharacterized ACR, COG1678
-
-
-
0.00000000000000000000000000000000001421
144.0
View
LYD1_k127_1599674_0
NfeD-like C-terminal, partner-binding
K07403
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009946
480.0
View
LYD1_k127_1599674_1
prohibitin homologues
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008325
294.0
View
LYD1_k127_1629193_0
Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
K02346
-
2.7.7.7
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139
493.0
View
LYD1_k127_1629193_1
Domain of unknown function (DUF4412)
-
-
-
0.000000000000000000000004343
111.0
View
LYD1_k127_1629193_2
toxin-antitoxin pair type II binding
-
-
-
0.00009889
48.0
View
LYD1_k127_1629193_3
nucleic acid-binding protein contains PIN domain
-
-
-
0.0009765
48.0
View
LYD1_k127_1644784_0
Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
K01952
-
6.3.5.3
0.0
1324.0
View
LYD1_k127_1644784_1
Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
K01756
-
4.3.2.2
9.508e-196
618.0
View
LYD1_k127_164923_0
One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
K02519
-
-
2.149e-287
903.0
View
LYD1_k127_164923_1
Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
K00147
GO:0003674,GO:0003824,GO:0004350,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114
1.2.1.41
5.11e-201
633.0
View
LYD1_k127_164923_10
Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
K03177
-
5.4.99.25
0.00000000000000000000000000000000000000000000000000000000000000001944
235.0
View
LYD1_k127_164923_11
Type II and III secretion system protein
K02666
-
-
0.0000000000000000000000000000000000000000000000000000000000003431
235.0
View
LYD1_k127_164923_12
Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
K03437
-
-
0.000000000000000000000000000000000000000000000000000000003243
209.0
View
LYD1_k127_164923_13
Archaea-specific editing domain of threonyl-tRNA synthetase
-
-
-
0.0000000000000000000000000000000000000000000003593
172.0
View
LYD1_k127_164923_14
Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
K00969
-
2.7.7.18
0.0000000000000000000000000000000000000001092
159.0
View
LYD1_k127_164923_15
Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
K09710
-
-
0.00000000000000000000000000000000006899
137.0
View
LYD1_k127_164923_16
One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
K02834
-
-
0.000000000000000000000001375
106.0
View
LYD1_k127_164923_17
Belongs to the bacterial ribosomal protein bL28 family
K02902
-
-
0.0000000000000000001014
89.0
View
LYD1_k127_164923_18
Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
K00783
-
2.1.1.177
0.00000000000000003969
86.0
View
LYD1_k127_164923_19
Pilus assembly protein, PilP
K02665
-
-
0.00000000002788
70.0
View
LYD1_k127_164923_2
ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
K03544
GO:0000166,GO:0000502,GO:0002020,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009376,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0019899,GO:0019904,GO:0030163,GO:0030164,GO:0030312,GO:0030554,GO:0031333,GO:0031597,GO:0032271,GO:0032272,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0040007,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043254,GO:0043335,GO:0044087,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051301,GO:0051704,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0097718,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1904949,GO:1905368,GO:1905369
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001469
596.0
View
LYD1_k127_164923_20
PFAM Fimbrial assembly
K02663
-
-
0.000000001776
65.0
View
LYD1_k127_164923_21
Pilus assembly protein, PilO
K02664
-
-
0.000000003
65.0
View
LYD1_k127_164923_22
Protein of unknown function (DUF721)
-
-
-
0.0007884
49.0
View
LYD1_k127_164923_3
Tetratricopeptide repeat
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002407
390.0
View
LYD1_k127_164923_4
Type IV pilus assembly protein PilM;
K02662
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002573
341.0
View
LYD1_k127_164923_5
Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
K01358
-
3.4.21.92
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005362
325.0
View
LYD1_k127_164923_6
Inositol monophosphatase family
K01092
-
3.1.3.25
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007242
291.0
View
LYD1_k127_164923_7
Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
K03545
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001807
294.0
View
LYD1_k127_164923_8
phosphoesterase RecJ domain protein
K06881
GO:0008150,GO:0040007
3.1.13.3,3.1.3.7
0.000000000000000000000000000000000000000000000000000000000000000000000001144
256.0
View
LYD1_k127_164923_9
metal ion binding
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000156
238.0
View
LYD1_k127_1691146_0
Cytochrome bd terminal oxidase subunit I
K00425
-
1.10.3.14
1.467e-204
645.0
View
LYD1_k127_1691146_1
Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology
K00812
-
2.6.1.1
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009439
438.0
View
LYD1_k127_1691146_2
PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
K03386
-
1.11.1.15
0.00000000000000000000000000000000000000000000000000000000004902
207.0
View
LYD1_k127_1691146_3
AhpC/TSA family
K03386
-
1.11.1.15
0.000000000000002557
76.0
View
LYD1_k127_1789902_0
PFAM ATP-binding region ATPase domain protein
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007493
341.0
View
LYD1_k127_1789902_1
Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
K12267
-
1.8.4.11,1.8.4.12
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005004
285.0
View
LYD1_k127_1791546_0
PFAM Radical SAM
-
-
-
2.989e-213
673.0
View
LYD1_k127_1791546_1
Histone deacetylase domain
K04768
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115
406.0
View
LYD1_k127_1791546_2
COGs COG1331 Highly conserved protein containing a thioredoxin domain
K06888
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004256
369.0
View
LYD1_k127_1791546_3
ATP dependent DNA ligase C terminal region
K01971
-
6.5.1.1
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002461
329.0
View
LYD1_k127_1791546_4
Ecdysteroid kinase
-
-
-
0.00000000000000000000000000000000000000000000000000001607
199.0
View
LYD1_k127_1791546_5
gas vesicle protein
-
-
-
0.0000000000000000001047
93.0
View
LYD1_k127_1804441_0
Sulfite exporter TauE/SafE
K07090
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007502
519.0
View
LYD1_k127_1804441_1
Two component, sigma54 specific, transcriptional regulator, Fis family
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002139
409.0
View
LYD1_k127_1804441_2
histidine kinase HAMP region domain protein
K02482
-
2.7.13.3
0.0000000000000000000000000000000000000000000000000000000001759
222.0
View
LYD1_k127_1804441_3
-
-
-
-
0.000000000000000001242
88.0
View
LYD1_k127_1804441_4
Belongs to the universal stress protein A family
-
-
-
0.0000000003193
64.0
View
LYD1_k127_1812282_0
Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily
K03615
GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005498
493.0
View
LYD1_k127_1812282_1
Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
K01952
-
6.3.5.3
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001788
439.0
View
LYD1_k127_1885005_0
Belongs to the peptidase S11 family
K07258
-
3.4.16.4
0.0000000000000000000000000000000000000000000000000000000000000000009374
239.0
View
LYD1_k127_1885005_1
ubiE/COQ5 methyltransferase family
K07755
-
2.1.1.137
0.00000000000000000000000000000000000000000000004021
176.0
View
LYD1_k127_1885005_2
-
-
-
-
0.0000000000000000000000000001074
119.0
View
LYD1_k127_1885005_3
Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
K03530
-
-
0.000000000000000000000000002829
113.0
View
LYD1_k127_1885005_4
Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
K03386
-
1.11.1.15
0.00000008033
55.0
View
LYD1_k127_1885005_5
PFAM pyridoxamine 5-phosphate
-
-
-
0.0000003772
53.0
View
LYD1_k127_1945865_0
all-trans-retinol 13,14-reductase activity
K03388
-
1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007762
565.0
View
LYD1_k127_1945865_1
Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
K00797
-
2.5.1.16
0.000000000000000000000000000000000000000000745
168.0
View
LYD1_k127_1945865_2
Spermine/spermidine synthase domain
-
-
-
0.000000000000000001863
87.0
View
LYD1_k127_1952254_0
PFAM DAHP synthetase I KDSA
K03856,K04516
-
2.5.1.54,5.4.99.5
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002222
427.0
View
LYD1_k127_1952254_1
-
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111
306.0
View
LYD1_k127_1952254_2
DJ-1/PfpI family
K03152
-
3.5.1.124
0.000000000000000000000000000000000000000000000000000000000000000000000000000000003234
274.0
View
LYD1_k127_1952254_3
Belongs to the adenylyl cyclase class-4 guanylyl cyclase family
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000003227
264.0
View
LYD1_k127_1952254_4
Rubrerythrin
-
-
-
0.00000000000000000000000000000000000000000000000009345
181.0
View
LYD1_k127_1952254_5
-
-
-
-
0.000000000000000000000000000002694
132.0
View
LYD1_k127_1952254_6
Thioredoxin
K03672
-
1.8.1.8
0.00000000000000000000000000004357
121.0
View
LYD1_k127_1961689_0
-
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006335
577.0
View
LYD1_k127_1961689_1
Belongs to the TPP enzyme family
K01652
-
2.2.1.6
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265
577.0
View
LYD1_k127_1961689_2
PFAM Aldehyde dehydrogenase
K00135
-
1.2.1.16,1.2.1.20,1.2.1.79
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000071
568.0
View
LYD1_k127_1961689_3
Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
K02835
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314
509.0
View
LYD1_k127_1961689_4
metal-dependent enzyme
K09153
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002829
298.0
View
LYD1_k127_1961689_5
Peptidase family M28
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000002604
267.0
View
LYD1_k127_1961689_6
Binds the 23S rRNA
K02909
-
-
0.00000000000000000000000002043
109.0
View
LYD1_k127_1961689_7
protein-(glutamine-N5) methyltransferase activity
K02493
GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0032259,GO:0036009,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564
2.1.1.297
0.00000000000000001902
87.0
View
LYD1_k127_2060151_0
Belongs to the ompA family
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000001056
239.0
View
LYD1_k127_2060151_1
Capsular polysaccharide biosynthesis protein
K01104
-
3.1.3.48
0.00000000001709
69.0
View
LYD1_k127_2060151_2
peptidyl-prolyl isomerase
K07533
-
5.2.1.8
0.000000005083
69.0
View
LYD1_k127_2060151_3
peptidylprolyl isomerase
K03770
GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006457,GO:0008150,GO:0009897,GO:0009986,GO:0009987,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0031233,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0061077,GO:0071575,GO:0071944,GO:0098552
5.2.1.8
0.00001638
57.0
View
LYD1_k127_2060151_4
Tetratricopeptide repeat
-
-
-
0.0002643
53.0
View
LYD1_k127_2065230_0
Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide
K00639
-
2.3.1.29
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000216
460.0
View
LYD1_k127_2065230_1
PFAM ResB family protein
K07399
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003107
380.0
View
LYD1_k127_2065230_2
Cytochrome C assembly protein
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000196
367.0
View
LYD1_k127_2065230_3
NmrA-like family
K01784
-
5.1.3.2
0.000000000000000000000000000000000000000000000000000005194
202.0
View
LYD1_k127_2065230_4
Domains REC, sigma54 interaction, HTH8
-
-
-
0.0000000000000000002253
91.0
View
LYD1_k127_2065368_0
Fumarate reductase flavoprotein C-term
K00239
-
1.3.5.1,1.3.5.4
1.103e-277
862.0
View
LYD1_k127_2065368_1
glycosyltransferase 36 associated
K00702,K13688
-
2.4.1.20
4.472e-231
719.0
View
LYD1_k127_2065368_2
Malic enzyme, NAD binding domain
K00027
-
1.1.1.38
2.489e-197
623.0
View
LYD1_k127_2065368_3
Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
K01679
-
4.2.1.2
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002712
520.0
View
LYD1_k127_2065368_4
Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
K00240
-
1.3.5.1,1.3.5.4
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002085
360.0
View
LYD1_k127_2065368_5
Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length
K04760
-
-
0.000000000000000000000000000000000000000000000000000000000005447
211.0
View
LYD1_k127_2065368_6
Protein of unknown function (DUF1456)
-
-
-
0.0000000000000000000000000000002268
123.0
View
LYD1_k127_2065368_7
Sensor histidine kinase, Cache_1, HAMP and PAS domain-containing
-
-
-
0.00000000000000000000000005101
121.0
View
LYD1_k127_2065368_8
Histidine Phosphotransfer domain
-
-
-
0.000000000008679
77.0
View
LYD1_k127_2065368_9
Spermidine synthase
K00797
-
2.5.1.16
0.0000006155
51.0
View
LYD1_k127_2086965_0
Metallo-beta-lactamase superfamily
K22405
-
1.6.3.4
6.323e-199
625.0
View
LYD1_k127_2086965_1
PFAM NADPH-dependent FMN reductase
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000001916
260.0
View
LYD1_k127_2086965_2
PFAM lipid A biosynthesis acyltransferase
K02517
-
2.3.1.241
0.00000000000000000000000000000000000000000000000000000000000000000008072
241.0
View
LYD1_k127_2086965_3
radical SAM
K06871
-
-
0.000000000000000000000000000000000000000005593
167.0
View
LYD1_k127_2086965_5
Belongs to the peptidase S16 family
K01338,K04076
-
3.4.21.53
0.000000000003181
67.0
View
LYD1_k127_209591_0
Belongs to the MurCDEF family
K01924
-
6.3.2.8
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001308
564.0
View
LYD1_k127_209591_1
Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
K03531
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009254
417.0
View
LYD1_k127_209591_10
cell division protein FtsQ
K03589
-
-
0.0000000000002717
79.0
View
LYD1_k127_209591_2
Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
K01925
-
6.3.2.9
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002981
419.0
View
LYD1_k127_209591_3
Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
K03590
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009543
400.0
View
LYD1_k127_209591_4
Cell cycle protein
K03588
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002078
396.0
View
LYD1_k127_209591_5
Cell wall formation
K01921
-
6.3.2.4
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003169
380.0
View
LYD1_k127_209591_6
Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
K02563
-
2.4.1.227
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004859
368.0
View
LYD1_k127_209591_7
Belongs to the peptidase S11 family
K07258
-
3.4.16.4
0.000000000000000000000000000000000000000000000000000000000000000000000001837
258.0
View
LYD1_k127_209591_8
Cell wall formation
K00075
-
1.3.1.98
0.0000000000000000000000000000000000000000000000000000000000009864
222.0
View
LYD1_k127_209591_9
First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
K01000
GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008963,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0030203,GO:0034645,GO:0040007,GO:0042546,GO:0042802,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044464,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576
2.7.8.13
0.00000000000000000000001048
100.0
View
LYD1_k127_2127638_0
DNA polymerase
K02347
-
-
9.747e-205
652.0
View
LYD1_k127_2127638_1
DsrE/DsrF/DrsH-like family
-
-
-
0.00000001476
57.0
View
LYD1_k127_2134364_0
Arsenite efflux pump ACR3 and related permeases
K03325
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009933
536.0
View
LYD1_k127_2134364_1
Predicted permease
K07089
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001423
487.0
View
LYD1_k127_2134364_2
helix_turn_helix, Arsenical Resistance Operon Repressor
K03892
-
-
0.000000000000000000000000000000000000001261
151.0
View
LYD1_k127_2134364_3
cell redox homeostasis
-
-
-
0.0000000000000000000003354
97.0
View
LYD1_k127_2134364_4
thiosulfate sulfurtransferase activity
-
-
-
0.000000000000000000004848
99.0
View
LYD1_k127_2134364_5
Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
-
-
-
0.00002068
48.0
View
LYD1_k127_2146015_0
Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
K03628
-
-
2.697e-214
671.0
View
LYD1_k127_2146015_1
Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2)
K11785
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009849
329.0
View
LYD1_k127_2146015_2
Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2)
K11783
-
3.2.2.26
0.00000000000000000000000000000000000000000000000000001019
199.0
View
LYD1_k127_2146015_3
Domain of unknown function (DUF202)
K00389
-
-
0.00000000000000000000000000000000000000000136
160.0
View
LYD1_k127_2146015_4
NapC/NirT cytochrome c family, N-terminal region
-
-
-
0.000000000000000000000000000000000001226
150.0
View
LYD1_k127_2146015_5
Could be involved in insertion of integral membrane proteins into the membrane
K08998
-
-
0.000000000000000000000003027
103.0
View
LYD1_k127_2146015_6
redox protein regulator of disulfide bond formation
K07397
-
-
0.00000000000000000004489
96.0
View
LYD1_k127_2146015_7
Ribosomal protein L34
K02914
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.00000000000000007365
81.0
View
LYD1_k127_2146015_8
RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
K03536
GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004526,GO:0004540,GO:0004549,GO:0005488,GO:0005575,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0030677,GO:0031123,GO:0031404,GO:0032991,GO:0033204,GO:0034414,GO:0034470,GO:0034641,GO:0034660,GO:0042301,GO:0042779,GO:0042780,GO:0042781,GO:0043167,GO:0043168,GO:0043170,GO:0043199,GO:0043628,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:0140101,GO:1901360,GO:1901363,GO:1901681,GO:1902494,GO:1902555,GO:1905267,GO:1905348,GO:1990904
3.1.26.5
0.000000000003296
72.0
View
LYD1_k127_2155472_0
PFAM Glycosyl transferase family 2
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441
297.0
View
LYD1_k127_2155472_1
transferase
K02851
GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0016740,GO:0016772,GO:0016780,GO:0030145,GO:0043167,GO:0043169,GO:0046872,GO:0046914
2.7.8.33,2.7.8.35
0.000000000000000000000000000000000000000000000000002969
190.0
View
LYD1_k127_2155472_3
O-acyltransferase activity
K00661,K03818
-
2.3.1.79
0.0000000000000001641
79.0
View
LYD1_k127_215725_0
Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
K03070
-
-
0.0
1129.0
View
LYD1_k127_215725_1
Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
K03106
-
3.6.5.4
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395
589.0
View
LYD1_k127_215725_10
Thioredoxin-like domain
K03671
-
-
0.00000000000000000000000000000000000000000000000002816
180.0
View
LYD1_k127_215725_11
This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
K02884
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904
-
0.000000000000000000000000000000000000004057
148.0
View
LYD1_k127_215725_12
Belongs to the UPF0109 family
K06960
-
-
0.00000000000000000000000000000001135
128.0
View
LYD1_k127_215725_13
cell redox homeostasis
K02199
-
-
0.00000000000000000000000000000008475
131.0
View
LYD1_k127_215725_14
Belongs to the bacterial ribosomal protein bS16 family
K02959
-
-
0.00000000000000000000000002715
111.0
View
LYD1_k127_215725_15
An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
K02860
-
-
0.000000000000000000001357
102.0
View
LYD1_k127_215725_17
protein secretion
K03116,K03117
-
-
0.0000001807
55.0
View
LYD1_k127_215725_18
PFAM iron dependent repressor
K03709
-
-
0.000001046
53.0
View
LYD1_k127_215725_19
Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
K06168
-
2.8.4.3
0.00002173
48.0
View
LYD1_k127_215725_2
Metal dependent phosphohydrolases with conserved 'HD' motif.
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007997
347.0
View
LYD1_k127_215725_3
diguanylate cyclase
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002354
336.0
View
LYD1_k127_215725_4
tRNA (Guanine-1)-methyltransferase
K00554
GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360
2.1.1.228
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001689
286.0
View
LYD1_k127_215725_5
Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
K03118
GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009977,GO:0015031,GO:0015291,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0022804,GO:0022857,GO:0022884,GO:0032991,GO:0033036,GO:0033281,GO:0034613,GO:0042886,GO:0042887,GO:0043953,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098796,GO:0098797,GO:1904680
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000009808
276.0
View
LYD1_k127_215725_6
ADP-ribosylation factor family
K06883
-
-
0.00000000000000000000000000000000000000000000000000000000000001069
229.0
View
LYD1_k127_215725_8
Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
K03470
-
3.1.26.4
0.000000000000000000000000000000000000000000000000000003507
197.0
View
LYD1_k127_215725_9
HEAT repeats
-
-
-
0.000000000000000000000000000000000000000000000000000009696
209.0
View
LYD1_k127_2162688_0
Belongs to the pyruvate kinase family
K00873
-
2.7.1.40
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059
398.0
View
LYD1_k127_2162688_1
Histidine kinase
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000672
396.0
View
LYD1_k127_2162688_2
-
K07112
GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944
-
0.000000000000000000000000000000000000000000000000000000000005922
221.0
View
LYD1_k127_2162688_3
S1 domain
K00243
-
-
0.000000000000000000000000000000000005524
140.0
View
LYD1_k127_2162688_4
RNase H
-
-
-
0.000000000000000000000000001686
123.0
View
LYD1_k127_2162688_5
endonuclease containing a URI domain
K07461
-
-
0.00000000001709
74.0
View
LYD1_k127_2201274_0
COG3901 Regulator of nitric oxide reductase transcription
K19339,K19343
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225
570.0
View
LYD1_k127_2201274_1
PFAM aldo keto reductase
K07079
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003755
441.0
View
LYD1_k127_2201274_2
Domain of unknown function (DUF362)
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252
355.0
View
LYD1_k127_2201274_4
-
-
-
-
0.0000000000000000000001866
97.0
View
LYD1_k127_2202268_0
One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
K02886
GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003047
385.0
View
LYD1_k127_2202268_1
Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
K02982
GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005524
332.0
View
LYD1_k127_2202268_10
The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
K02890
-
-
0.0000000000000000000000000000000001044
135.0
View
LYD1_k127_2202268_11
One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
K02895
-
-
0.00000000000000000000000000000000882
134.0
View
LYD1_k127_2202268_12
Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
K02954
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.0000000000000000000000003917
107.0
View
LYD1_k127_2202268_13
One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
K02961
-
-
0.0000000000000000000000004487
107.0
View
LYD1_k127_2202268_14
One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
K02892
GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.0000000000000000000001528
99.0
View
LYD1_k127_2202268_15
This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
K02358
-
-
0.00000000000000000266
84.0
View
LYD1_k127_2202268_16
Belongs to the universal ribosomal protein uL29 family
K02904
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904
-
0.00000000000001423
75.0
View
LYD1_k127_2202268_2
One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
K02906
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002959
282.0
View
LYD1_k127_2202268_3
This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
K02931
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003686
276.0
View
LYD1_k127_2202268_4
Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
K02878
GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904
-
0.0000000000000000000000000000000000000000000000000000000000000000008933
229.0
View
LYD1_k127_2202268_5
One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome
K02926
-
-
0.00000000000000000000000000000000000000000000000000000000000000005189
229.0
View
LYD1_k127_2202268_6
Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
K02874
GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904
-
0.0000000000000000000000000000000000000000000000000000000001815
205.0
View
LYD1_k127_2202268_7
One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
K02994
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904
-
0.00000000000000000000000000000000000000000000000006179
180.0
View
LYD1_k127_2202268_8
Involved in the binding of tRNA to the ribosomes
K02946
-
-
0.000000000000000000000000000000000000000000002094
167.0
View
LYD1_k127_2202268_9
Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
K02965
GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904
-
0.00000000000000000000000000000000000000003395
153.0
View
LYD1_k127_2217145_0
Delta-aminolevulinic acid dehydratase
K01698
-
4.2.1.24
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166
496.0
View
LYD1_k127_2217145_1
Elongator protein 3, MiaB family, Radical SAM
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002551
479.0
View
LYD1_k127_2217145_2
Belongs to the GPI family
K01810
-
5.3.1.9
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007269
387.0
View
LYD1_k127_2217145_3
geranylgeranyl reductase activity
K14266
-
1.14.19.9
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000859
389.0
View
LYD1_k127_2217145_4
Belongs to the HesB IscA family
K15724
-
-
0.0000000000000000000000000000001798
126.0
View
LYD1_k127_2217145_5
Cyclic nucleotide-monophosphate binding domain
-
-
-
0.0000000000000000000000009512
111.0
View
LYD1_k127_2217145_6
-
-
-
-
0.000000003272
62.0
View
LYD1_k127_2217145_7
Soluble NSF attachment protein, SNAP
-
-
-
0.0001528
51.0
View
LYD1_k127_2224065_0
Belongs to the anaerobic coproporphyrinogen-III oxidase family
-
-
-
5.974e-203
641.0
View
LYD1_k127_2224065_1
MacB-like periplasmic core domain
K02004
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001618
595.0
View
LYD1_k127_2224065_10
GDP-mannose 4,6 dehydratase
K19180
-
1.1.1.339
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007809
312.0
View
LYD1_k127_2224065_11
EamA-like transporter family
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002426
291.0
View
LYD1_k127_2224065_12
Methyltransferase FkbM domain
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000003974
262.0
View
LYD1_k127_2224065_13
HAD-superfamily hydrolase, subfamily IA, variant 3
K01091
-
3.1.3.18
0.00000000000000000000000000000000000000000000000000000000002217
213.0
View
LYD1_k127_2224065_14
Methyltransferase domain
-
-
-
0.000000000000000000000000000000000000000000000000005315
188.0
View
LYD1_k127_2224065_15
Glycosyl transferase family 2
K12992
-
-
0.000000000000000000000000000000000000000000000000005762
201.0
View
LYD1_k127_2224065_16
Nucleotidyl transferase
K00978
-
2.7.7.33
0.0000000000000000000000000000000000000000001973
168.0
View
LYD1_k127_2224065_17
Methyltransferase domain
-
-
-
0.0000000000000000000000000000000000000002535
157.0
View
LYD1_k127_2224065_18
Methyltransferase domain
K00568
-
2.1.1.222,2.1.1.64
0.00000000000000000000000000000000000001856
156.0
View
LYD1_k127_2224065_19
Glucosyl transferase GtrII
-
-
-
0.000000000000000000000345
111.0
View
LYD1_k127_2224065_2
PFAM outer membrane efflux protein
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087
472.0
View
LYD1_k127_2224065_20
Methyltransferase
-
-
-
0.000000000000000000001157
106.0
View
LYD1_k127_2224065_21
Glycosyl transferases group 1
-
-
-
0.00000000000000000004719
93.0
View
LYD1_k127_2224065_22
Glycosyltransferase Family 4
-
-
-
0.0000000000000007232
91.0
View
LYD1_k127_2224065_23
ATP-independent chaperone mediated protein folding
-
-
-
0.0001661
52.0
View
LYD1_k127_2224065_3
Glycosyl transferase family 2
K00721,K20534
-
2.4.1.83
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345
437.0
View
LYD1_k127_2224065_4
Biotin-lipoyl like
K02005
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001463
442.0
View
LYD1_k127_2224065_5
Amino acid permease
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004932
417.0
View
LYD1_k127_2224065_6
Polysaccharide biosynthesis protein
K01709
-
4.2.1.45
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015
406.0
View
LYD1_k127_2224065_7
Elongator protein 3, MiaB family, Radical SAM
K01012
-
2.8.1.6
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003574
379.0
View
LYD1_k127_2224065_8
Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007706
370.0
View
LYD1_k127_2224065_9
ABC transporter
K02003
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007039
321.0
View
LYD1_k127_2240008_0
UvrD-like helicase C-terminal domain
K03657
-
3.6.4.12
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003066
571.0
View
LYD1_k127_2240008_1
Lipoate-protein ligase
K03800
GO:0003674,GO:0003824,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016415,GO:0016740,GO:0016746,GO:0016747,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576
6.3.1.20
0.00000000000000000000000000000000000000000000002644
179.0
View
LYD1_k127_2240008_2
TIGRFAM preprotein translocase, YajC subunit
K03210
-
-
0.00004342
47.0
View
LYD1_k127_2241260_0
NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
K13378
-
1.6.5.3
3.67e-307
948.0
View
LYD1_k127_2241260_1
PFAM 6-phosphogluconate dehydrogenase NAD-binding
K00033
-
1.1.1.343,1.1.1.44
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000396
384.0
View
LYD1_k127_2241260_10
Rieske [2Fe-2S] domain
K02636,K03886
-
1.10.9.1
0.0000000000000000000000000000000001608
138.0
View
LYD1_k127_2241260_11
ATP-dependent Clp protease ATP-binding subunit ClpA
K03694
-
-
0.0002356
43.0
View
LYD1_k127_2241260_2
NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
K00335
-
1.6.5.3
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005189
362.0
View
LYD1_k127_2241260_3
NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
K00331
-
1.6.5.3
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004699
343.0
View
LYD1_k127_2241260_4
Cytochrome b/b6/petB
K00412,K03888
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004727
340.0
View
LYD1_k127_2241260_5
Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
K00684
-
2.3.2.6
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007478
292.0
View
LYD1_k127_2241260_6
Thioredoxin-like [2Fe-2S] ferredoxin
K00334
-
1.6.5.3
0.0000000000000000000000000000000000000000000000000000000000001761
214.0
View
LYD1_k127_2241260_7
NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
K00330
GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0050136,GO:0055114,GO:0098796,GO:1902494
1.6.5.3
0.0000000000000000000000000000000000000000000229
164.0
View
LYD1_k127_2241260_8
Universal stress protein family
-
-
-
0.0000000000000000000000000000000000000000001356
164.0
View
LYD1_k127_2241260_9
Universal stress protein family
-
-
-
0.000000000000000000000000000000000000000006581
158.0
View
LYD1_k127_2269783_0
PFAM 2Fe-2S iron-sulfur cluster binding domain
-
-
-
3.224e-226
718.0
View
LYD1_k127_2269783_1
Uroporphyrinogen decarboxylase (URO-D)
K14080
-
2.1.1.246
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004033
418.0
View
LYD1_k127_2269783_10
Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
K13039
-
4.1.1.79
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000566
309.0
View
LYD1_k127_2269783_11
Part of the ABC transporter complex PstSACB involved in phosphate import
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000002534
269.0
View
LYD1_k127_2269783_12
SMART ATP-binding region ATPase domain protein
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000008767
275.0
View
LYD1_k127_2269783_13
Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
K03620,K08354
GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944
-
0.00000000000000000000000000000000000000000000000000000000000000000002447
243.0
View
LYD1_k127_2269783_14
Thioesterase superfamily
-
-
-
0.000000000000000000000000000000000000000000000000000000000004927
212.0
View
LYD1_k127_2269783_15
TIGRFAM iron-sulfur cluster binding protein
-
-
-
0.0000000000000000000000000000000000000000000001326
175.0
View
LYD1_k127_2269783_16
PFAM Carboxymuconolactone decarboxylase
-
-
-
0.0000000000000000000000000000000000000000541
157.0
View
LYD1_k127_2269783_17
PFAM Nitrate reductase gamma subunit
-
-
-
0.0000000000000000000000006203
113.0
View
LYD1_k127_2269783_18
OsmC-like protein
-
-
-
0.00000000000000001313
89.0
View
LYD1_k127_2269783_19
-
-
-
-
0.000000000000003443
79.0
View
LYD1_k127_2269783_2
Tetrahydromethanopterin S-methyltransferase MtrH subunit
K00584
-
2.1.1.86
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000461
373.0
View
LYD1_k127_2269783_20
PFAM Nitrate reductase gamma subunit
-
-
-
0.000000005146
66.0
View
LYD1_k127_2269783_21
PFAM PBS lyase HEAT-like repeat
-
-
-
0.00000007365
56.0
View
LYD1_k127_2269783_22
Protein of unknown function (DUF2934)
-
-
-
0.00000008366
57.0
View
LYD1_k127_2269783_23
PilZ domain
-
-
-
0.0000009138
59.0
View
LYD1_k127_2269783_3
PFAM V-type ATPase 116 kDa
K02123
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000288
341.0
View
LYD1_k127_2269783_4
Specifically catalyzes the beta-elimination of phosphate from L-phosphoserine and the beta-addition of sulfite to the dehydroalanine intermediate to produce L-cysteate
K15527
-
2.5.1.76
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000418
338.0
View
LYD1_k127_2269783_5
Methionine synthase, cobalamin (vitamin B12)-binding module, cap
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003731
319.0
View
LYD1_k127_2269783_6
PFAM Cysteine-rich domain
K08264
-
1.8.98.1
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006593
329.0
View
LYD1_k127_2269783_7
Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B). HdrD may act as the catalytic subunit
K08264
GO:0003674,GO:0003824,GO:0006091,GO:0008150,GO:0008152,GO:0009058,GO:0009061,GO:0009987,GO:0015947,GO:0015948,GO:0015975,GO:0015980,GO:0016491,GO:0016667,GO:0043446,GO:0043447,GO:0044237,GO:0044249,GO:0045333,GO:0051912,GO:0055114,GO:0071704,GO:1901576
1.8.98.1
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001324
321.0
View
LYD1_k127_2269783_8
Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
K01599,K14080
-
2.1.1.246,4.1.1.37
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002283
314.0
View
LYD1_k127_2269783_9
denitrification pathway
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007907
321.0
View
LYD1_k127_2282618_0
Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
K09458
-
2.3.1.179
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006398
539.0
View
LYD1_k127_2282618_1
Mediates influx of magnesium ions
K03284
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005694
475.0
View
LYD1_k127_2282618_2
Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
K03685
-
3.1.26.3
0.000000000000000000000000000000000000000000000000000007074
197.0
View
LYD1_k127_2282618_3
Cytochrome P460
-
-
-
0.00000000000000000000000000000000000001708
150.0
View
LYD1_k127_2282618_4
-
-
-
-
0.00000000000000000008913
100.0
View
LYD1_k127_2282618_8
PilZ domain
-
-
-
0.00003278
52.0
View
LYD1_k127_232597_0
Heat shock 70 kDa protein
K04043
-
-
0.0
1020.0
View
LYD1_k127_232597_1
Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
K01491
-
1.5.1.5,3.5.4.9
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001673
480.0
View
LYD1_k127_232597_10
Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
K03687
-
-
0.00000000000000000000000000000000000005126
150.0
View
LYD1_k127_232597_11
His Kinase A (phosphoacceptor
-
-
-
0.000000000003863
78.0
View
LYD1_k127_232597_12
integral membrane protein
-
-
-
0.000001877
58.0
View
LYD1_k127_232597_2
Transporter associated domain
K03699
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004131
448.0
View
LYD1_k127_232597_3
ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
K03686
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004365
416.0
View
LYD1_k127_232597_4
Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate
K00606
-
2.1.2.11
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004195
356.0
View
LYD1_k127_232597_5
Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
K03705
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002135
308.0
View
LYD1_k127_232597_6
GTP cyclohydrolase I
K01495
GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617
3.5.4.16
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004042
276.0
View
LYD1_k127_232597_7
SEC-C motif
K09858
-
-
0.00000000000000000000000000000000000000000000000000000000000009827
217.0
View
LYD1_k127_232597_8
Histidine kinase
-
-
-
0.00000000000000000000000000000000000000000000000000000000004605
218.0
View
LYD1_k127_232597_9
Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
K09761
-
2.1.1.193
0.000000000000000000000000000000000000000000000001152
182.0
View
LYD1_k127_2340099_0
ABC-2 type transporter
K09690,K09692
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001464
337.0
View
LYD1_k127_2340099_1
Subtilase family
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002733
351.0
View
LYD1_k127_2340099_2
Catalyzes the synthesis of activated sulfate
K00860,K00955
-
2.7.1.25,2.7.7.4
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004677
301.0
View
LYD1_k127_2340099_3
ATPases associated with a variety of cellular activities
K01990,K09689,K09691
-
3.6.3.38
0.0000000000000000000000000000000000000000000000000000003554
196.0
View
LYD1_k127_2340099_4
Winged helix-turn-helix DNA-binding
-
-
-
0.0000000000000000000000000000000000000000003264
165.0
View
LYD1_k127_2340099_5
nuclease activity
-
-
-
0.00000000000000000000000000000000000003577
144.0
View
LYD1_k127_2340099_6
23S rRNA-intervening sequence protein
-
-
-
0.00000000000000000000000000000000000007302
145.0
View
LYD1_k127_2340099_8
-
-
-
-
0.000000000000000006253
93.0
View
LYD1_k127_2340099_9
self proteolysis
-
-
-
0.000000000002857
72.0
View
LYD1_k127_2370031_0
Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
K03798
GO:0003674,GO:0003824,GO:0004176,GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009057,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0030163,GO:0042623,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575
-
7.95e-243
756.0
View
LYD1_k127_2370031_1
Tetratricopeptide repeat
-
-
-
1.584e-227
732.0
View
LYD1_k127_2370031_2
Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
K00820
GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576
2.6.1.16
9.546e-207
660.0
View
LYD1_k127_2370031_3
Bacterial regulatory protein, Fis family
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000216
522.0
View
LYD1_k127_2370031_4
CAAX protease self-immunity
K07052
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000001659
268.0
View
LYD1_k127_2370031_5
Acetyltransferase (GNAT) domain
-
-
-
0.0000000000000000000000000000000000000000000000001095
185.0
View
LYD1_k127_2370031_6
transcriptional regulator containing an HTH domain fused to a Zn-ribbon
K07743
-
-
0.000000000000000000000000000000009957
130.0
View
LYD1_k127_2370031_7
-
-
-
-
0.00000000000000000000000002343
113.0
View
LYD1_k127_2370031_8
His Kinase A (phosphoacceptor) domain
K07708
-
2.7.13.3
0.0000000000003039
74.0
View
LYD1_k127_2371462_0
FtsX-like permease family
K02004
-
-
7.6e-322
1002.0
View
LYD1_k127_2371462_1
General secretory system II, protein E domain protein
K02454
-
-
3.467e-262
821.0
View
LYD1_k127_2371462_2
Sigma-54 interaction domain
-
-
-
8.796e-243
762.0
View
LYD1_k127_2371462_3
His Kinase A (phosphoacceptor) domain
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009177
403.0
View
LYD1_k127_2371462_4
TIGRFAM efflux transporter, RND family, MFP subunit
K02005
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004698
383.0
View
LYD1_k127_2371462_5
PFAM ABC transporter
K02003
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001662
359.0
View
LYD1_k127_2371462_6
His Kinase A (phosphoacceptor) domain
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000001641
296.0
View
LYD1_k127_2371462_7
Cyclophilin-like
K09143
-
-
0.00000000000000000000000000000000000000000004174
162.0
View
LYD1_k127_2371462_8
Histidine kinase
K02482
-
2.7.13.3
0.00000000000000001126
84.0
View
LYD1_k127_2403921_0
His Kinase A (phosphoacceptor) domain
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006524
346.0
View
LYD1_k127_2403921_1
NADH dehydrogenase
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000007545
271.0
View
LYD1_k127_2403921_2
PFAM NADH Ubiquinone
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000001651
227.0
View
LYD1_k127_2403921_3
Sigma-54 interaction domain
-
-
-
0.000000000000000000000000000000000000004262
149.0
View
LYD1_k127_2403921_4
phosphate binding protein
K02040
-
-
0.0006693
43.0
View
LYD1_k127_2406183_0
part of a sulfur-relay system
K11179
-
-
0.00000000000000000000000000006783
117.0
View
LYD1_k127_2406183_1
TGS domain
K06944
-
-
0.000000000000000000000000002823
114.0
View
LYD1_k127_2450043_0
Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle
K01596
-
4.1.1.32
1.405e-310
959.0
View
LYD1_k127_2450043_1
Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
K01875
-
6.1.1.11
4.154e-198
624.0
View
LYD1_k127_2450043_10
Metallo-beta-lactamase superfamily
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000002594
233.0
View
LYD1_k127_2450043_11
Biotin/lipoate A/B protein ligase family
K03524
-
6.3.4.15
0.00000000000000000000000000000000000000000000000000000000000000006346
231.0
View
LYD1_k127_2450043_12
Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
K03525
-
2.7.1.33
0.000000000000000000000000000000000000000000001513
174.0
View
LYD1_k127_2450043_13
Universal stress protein family
-
-
-
0.0000000000000000000000000000000000000005794
156.0
View
LYD1_k127_2450043_14
energy transducer activity
K03832
-
-
0.000000000000000000000000000000000001477
149.0
View
LYD1_k127_2450043_15
proteolysis
K03665
-
-
0.000000000000000000000000000007891
124.0
View
LYD1_k127_2450043_2
tRNA synthetases class I (W and Y)
K01867
-
6.1.1.2
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001146
490.0
View
LYD1_k127_2450043_3
Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane
K03980
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008163
453.0
View
LYD1_k127_2450043_4
Galactose-1-phosphate uridyl transferase, C-terminal domain
K00965
-
2.7.7.12
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001754
337.0
View
LYD1_k127_2450043_5
Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
K01937
-
6.3.4.2
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009852
292.0
View
LYD1_k127_2450043_6
Belongs to the metallo-dependent hydrolases superfamily. NagA family
K01443
-
3.5.1.25
0.000000000000000000000000000000000000000000000000000000000000000000000000007251
261.0
View
LYD1_k127_2450043_7
Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
K00979
-
2.7.7.38
0.00000000000000000000000000000000000000000000000000000000000000000000004711
249.0
View
LYD1_k127_2450043_8
Belongs to the TrpC family
K01609
-
4.1.1.48
0.00000000000000000000000000000000000000000000000000000000000000000000006662
248.0
View
LYD1_k127_2450043_9
Peptidase family M50
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000008947
239.0
View
LYD1_k127_2461894_0
Las17-binding protein actin regulator
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000001948
243.0
View
LYD1_k127_2461894_1
Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
K03981
-
5.3.4.1
0.00000000000000000000000000000000000000000000000000000000000001919
223.0
View
LYD1_k127_2461894_2
Metallo-beta-lactamase superfamily
-
-
-
0.0000000000000000000000000000000000000000000000000000001964
201.0
View
LYD1_k127_2461894_3
MGS-like domain
-
-
-
0.0000000000000000000000000000000000000000000000000004354
192.0
View
LYD1_k127_2461894_4
PFAM Uncharacterised protein family (UPF0153)
-
-
-
0.000000000000000000000000000000000000000005288
162.0
View
LYD1_k127_2461894_5
-
-
-
-
0.000000000000000000000001387
111.0
View
LYD1_k127_2547798_0
Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
K03596
-
-
4.574e-285
885.0
View
LYD1_k127_2547798_1
Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
K14652
-
3.5.4.25,4.1.99.12
1.432e-194
613.0
View
LYD1_k127_2547798_10
Predicted 3'-5' exonuclease related to the exonuclease domain of PolB
K07501
-
-
0.00000000000000000000000000000000000000000000000000003981
196.0
View
LYD1_k127_2547798_11
Belongs to the ABC-4 integral membrane protein family. FtsX subfamily
K09811
-
-
0.000000000000000000000000000000000001723
149.0
View
LYD1_k127_2547798_12
Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
K03625
-
-
0.000000000000000000000000000001818
125.0
View
LYD1_k127_2547798_13
Transcriptional regulator, arsR family
-
-
-
0.0000000000000000000000004427
108.0
View
LYD1_k127_2547798_14
-
-
-
-
0.000000000000000000000006211
108.0
View
LYD1_k127_2547798_15
Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
K01756
-
4.3.2.2
0.00000000000004815
72.0
View
LYD1_k127_2547798_2
tail specific protease
K03797
-
3.4.21.102
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229
479.0
View
LYD1_k127_2547798_3
very-long-chain-acyl-CoA dehydrogenase activity
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000184
267.0
View
LYD1_k127_2547798_4
ROK family
K00845,K13967,K19979,K20433
-
2.7.1.188,2.7.1.2,2.7.1.214,2.7.1.60,5.1.3.9
0.0000000000000000000000000000000000000000000000000000000000000000000000000005737
265.0
View
LYD1_k127_2547798_5
Signal peptidase, peptidase S26
K03100
-
3.4.21.89
0.000000000000000000000000000000000000000000000000000000000000000000000000312
254.0
View
LYD1_k127_2547798_6
Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
K00794
GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
2.5.1.78
0.0000000000000000000000000000000000000000000000000000000000000000000006186
239.0
View
LYD1_k127_2547798_7
ABC transporter
K09812
-
-
0.000000000000000000000000000000000000000000000000000000000000000000005905
240.0
View
LYD1_k127_2547798_8
Peptidase family M23
K21471
-
-
0.00000000000000000000000000000000000000000000000000000000005983
222.0
View
LYD1_k127_2547798_9
Lumazine binding domain
K00793
-
2.5.1.9
0.00000000000000000000000000000000000000000000000000000007101
201.0
View
LYD1_k127_2559644_0
Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
K01626
-
2.5.1.54
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009724
477.0
View
LYD1_k127_2559644_1
PFAM Major Facilitator Superfamily
-
-
-
0.000000000000000000000000000012
121.0
View
LYD1_k127_2559644_2
Cytochrome C oxidase, cbb3-type, subunit III
-
-
-
0.000000000000001224
91.0
View
LYD1_k127_25934_0
A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
K02470
-
5.99.1.3
1.72e-237
746.0
View
LYD1_k127_25934_1
Elongation factor SelB, winged helix
K03833
-
-
4.076e-210
670.0
View
LYD1_k127_25934_10
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family
K03270
-
3.1.3.45
0.0000000000000000000000000000000000000000000000001366
182.0
View
LYD1_k127_25934_11
Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
K08591
-
2.3.1.15
0.000000000000000000000000000000000000000000000004188
179.0
View
LYD1_k127_25934_12
CDP-alcohol phosphatidyltransferase
K00995
-
2.7.8.5
0.000000000000000000000000000000000000000003605
160.0
View
LYD1_k127_25934_13
NTPase
-
-
-
0.000000000000000000000000000000000000002671
152.0
View
LYD1_k127_25934_14
Domain of unknown function (DUF4388)
-
-
-
0.00000000000000000000000000000000000001303
160.0
View
LYD1_k127_25934_16
peptidyl-tyrosine sulfation
-
-
-
0.0000000008285
72.0
View
LYD1_k127_25934_17
Uncharacterised protein family (UPF0158)
-
-
-
0.000000009394
63.0
View
LYD1_k127_25934_2
Protein conserved in bacteria
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659
529.0
View
LYD1_k127_25934_3
it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
K02313
GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003335
510.0
View
LYD1_k127_25934_4
Ecdysteroid kinase
K07102
-
2.7.1.221
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001848
463.0
View
LYD1_k127_25934_5
L-seryl-tRNASec selenium transferase activity
K01042
GO:0003674,GO:0003824,GO:0004125,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009059,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016070,GO:0016259,GO:0016260,GO:0016740,GO:0016785,GO:0018130,GO:0019438,GO:0019752,GO:0019842,GO:0030170,GO:0032774,GO:0034641,GO:0034654,GO:0034660,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0090304,GO:0097056,GO:0097159,GO:0140098,GO:0140101,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
2.9.1.1
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321
446.0
View
LYD1_k127_25934_6
Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
K02338
-
2.7.7.7
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007442
341.0
View
LYD1_k127_25934_7
ParB-like nuclease domain
K03497
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007363
328.0
View
LYD1_k127_25934_8
PFAM CobQ CobB MinD ParA nucleotide binding domain
K03496
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004329
317.0
View
LYD1_k127_25934_9
Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
K06920
-
6.3.4.20
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001611
288.0
View
LYD1_k127_2745855_0
May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
K01251
-
3.3.1.1
5.991e-203
638.0
View
LYD1_k127_2745855_1
Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
K00789
-
2.5.1.6
1.186e-198
624.0
View
LYD1_k127_2745855_10
Probable molybdopterin binding domain
-
-
-
0.0000000000000000000000000000000000000000000000000000000003289
206.0
View
LYD1_k127_2745855_11
Catalyzes the reversible hydration of fumarate to (S)- malate
K01676
-
4.2.1.2
0.000000000000000000000000000000000000000000000000000008292
197.0
View
LYD1_k127_2745855_12
AMP binding
-
-
-
0.000000000000000000000000000000000000000007007
158.0
View
LYD1_k127_2745855_13
UDP-4-amino-4-deoxy-L-arabinose aminotransferase
K13010
-
2.6.1.102
0.00000000000000000000000000000000000000007689
154.0
View
LYD1_k127_2745855_14
AMP binding
-
-
-
0.0000000000000000000000000000000000000002176
161.0
View
LYD1_k127_2745855_15
Glycosyl transferase family 2
-
-
-
0.000000000000000000000000000000000001422
140.0
View
LYD1_k127_2745855_16
Transcriptional regulator
-
-
-
0.00000000000000000000000000000001865
136.0
View
LYD1_k127_2745855_17
Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
K03530
-
-
0.00000000000000000000000000000009998
126.0
View
LYD1_k127_2745855_18
-
-
-
-
0.0000000000000000006593
89.0
View
LYD1_k127_2745855_19
O-antigen
K02847
-
-
0.0000000000007796
80.0
View
LYD1_k127_2745855_2
ABC transporter
K02021,K06147,K11085
GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006855,GO:0006869,GO:0008144,GO:0008150,GO:0008289,GO:0008559,GO:0009987,GO:0010876,GO:0015221,GO:0015238,GO:0015399,GO:0015405,GO:0015437,GO:0015893,GO:0015920,GO:0016020,GO:0016021,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0034040,GO:0034204,GO:0035639,GO:0036094,GO:0042221,GO:0042493,GO:0042623,GO:0042626,GO:0042802,GO:0042908,GO:0042910,GO:0043167,GO:0043168,GO:0043190,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0061024,GO:0065007,GO:0065008,GO:0071702,GO:0071840,GO:0071944,GO:0097035,GO:0097159,GO:0097367,GO:0098533,GO:0098796,GO:0098797,GO:1901264,GO:1901265,GO:1901363,GO:1901505,GO:1902494,GO:1902495,GO:1904949,GO:1990351
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001564
501.0
View
LYD1_k127_2745855_20
CYTH
K05873
-
4.6.1.1
0.000000000001102
75.0
View
LYD1_k127_2745855_21
-
-
-
-
0.0000000001875
64.0
View
LYD1_k127_2745855_22
PFAM Rhodanese domain protein
-
-
-
0.00000002548
62.0
View
LYD1_k127_2745855_23
PKD domain
-
-
-
0.00001482
57.0
View
LYD1_k127_2745855_3
Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide
K00652
-
2.3.1.47
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002655
388.0
View
LYD1_k127_2745855_4
Sodium/calcium exchanger protein
K07301
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008031
359.0
View
LYD1_k127_2745855_5
transferase activity, transferring glycosyl groups
K13500
-
2.4.1.175,2.4.1.226
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003538
299.0
View
LYD1_k127_2745855_6
Fumarate hydratase (Fumerase)
K01676
-
4.2.1.2
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008988
286.0
View
LYD1_k127_2745855_7
NmrA-like family
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000001366
248.0
View
LYD1_k127_2745855_8
Cytochrome C biogenesis protein transmembrane region
K06196
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000006275
244.0
View
LYD1_k127_2745855_9
PFAM MOSC domain
-
-
-
0.0000000000000000000000000000000000000000000000000000000000002397
214.0
View
LYD1_k127_278515_0
Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
K03650
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001642
506.0
View
LYD1_k127_278515_1
Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins
K03217
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001708
491.0
View
LYD1_k127_278515_2
DHHA2 domain
K15986
-
3.6.1.1
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001715
479.0
View
LYD1_k127_278515_3
-
-
-
-
0.0000000000000000000000003277
105.0
View
LYD1_k127_2789350_0
ATP-dependent Clp protease ATP-binding subunit ClpA
K03694
-
-
3.181e-276
868.0
View
LYD1_k127_2789350_1
Elongator protein 3, MiaB family, Radical SAM
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007484
436.0
View
LYD1_k127_2789350_2
Belongs to the class-I aminoacyl-tRNA synthetase family
K01883
-
6.1.1.16
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009981
399.0
View
LYD1_k127_2789350_3
MatE
K03327
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054
394.0
View
LYD1_k127_2789350_4
Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
K06891
-
-
0.0000000000000000000000000000004236
124.0
View
LYD1_k127_2797472_0
PFAM nickel-dependent hydrogenase large subunit
K00436,K14126
-
1.12.1.2,1.8.98.5
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002135
527.0
View
LYD1_k127_2797472_1
PFAM sigma-54 factor interaction domain-containing protein
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000586
426.0
View
LYD1_k127_2797472_10
PFAM nickel-dependent hydrogenase large subunit
K00436,K14126
-
1.12.1.2,1.8.98.5
0.00003453
46.0
View
LYD1_k127_2797472_2
Oxidoreductase FAD-binding domain
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002396
402.0
View
LYD1_k127_2797472_3
NADH ubiquinone oxidoreductase 20 kDa subunit
K14128
-
1.8.98.5
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000761
336.0
View
LYD1_k127_2797472_4
4Fe-4S dicluster domain
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000002834
243.0
View
LYD1_k127_2797472_5
Cytochrome C oxidase, cbb3-type, subunit III
K08906
-
-
0.0000000000000000000000000003727
118.0
View
LYD1_k127_2797472_6
Universal stress protein family
-
-
-
0.00000000003119
71.0
View
LYD1_k127_2797472_7
Sulphur transport
K07112
-
-
0.00000000006812
68.0
View
LYD1_k127_2797472_8
COG0589 Universal stress protein UspA and related nucleotide-binding proteins
-
-
-
0.000000003034
64.0
View
LYD1_k127_2797472_9
COG0589 Universal stress protein UspA and related nucleotide-binding proteins
-
-
-
0.000001881
57.0
View
LYD1_k127_2807258_0
PFAM Phosphate-selective porin O and P
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008344
425.0
View
LYD1_k127_2807258_1
general secretion pathway protein G
K02456
-
-
0.0000000000000000000000000000000000000000000000000000000003916
206.0
View
LYD1_k127_2807258_2
Type II secretion system (T2SS), protein J
K02459
-
-
0.00000000000000000000000001469
117.0
View
LYD1_k127_2807258_3
Prokaryotic N-terminal methylation motif
K02457
-
-
0.0000000000000000000001172
104.0
View
LYD1_k127_2807258_4
SMART Rhodanese domain protein
-
-
-
0.0000000000000000001533
91.0
View
LYD1_k127_2807258_5
Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
K02461
-
-
0.0000000000004799
80.0
View
LYD1_k127_2807258_6
Prokaryotic N-terminal methylation motif
K02458
-
-
0.0000000001189
67.0
View
LYD1_k127_2807258_8
Type II secretion system (T2SS), protein K
K02460
-
-
0.00000004955
64.0
View
LYD1_k127_2807258_9
-
-
-
-
0.0001043
51.0
View
LYD1_k127_2839531_0
Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins
K04487
-
2.8.1.7
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001622
416.0
View
LYD1_k127_2839531_1
Catalyzes the conversion of dihydroorotate to orotate
K00254,K02823,K17828
GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
1.3.1.14,1.3.5.2
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005636
377.0
View
LYD1_k127_2839531_10
PFAM GCN5-related N-acetyltransferase
-
-
-
0.000000000000000000000000000000002942
135.0
View
LYD1_k127_2839531_11
Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
K01881
-
6.1.1.15
0.000000000000000000000000006118
112.0
View
LYD1_k127_2839531_12
Sulfurtransferase TusA
-
-
-
0.000000000000000000000003548
104.0
View
LYD1_k127_2839531_2
MacB-like periplasmic core domain
K02004
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005541
331.0
View
LYD1_k127_2839531_3
Pyridine nucleotide-disulphide oxidoreductase
K00384
-
1.8.1.9
0.0000000000000000000000000000000000000000000000000000000000000000000000000000001302
275.0
View
LYD1_k127_2839531_4
Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
K03624
-
-
0.0000000000000000000000000000000000000000000000000000000000000000002861
232.0
View
LYD1_k127_2839531_5
S-adenosyl-l-methionine hydroxide adenosyltransferase
K22205
-
-
0.000000000000000000000000000000000000000000000000000000000000000001358
236.0
View
LYD1_k127_2839531_6
Flavodoxin-like fold
K19784
-
-
0.00000000000000000000000000000000000000000000000000000000005708
206.0
View
LYD1_k127_2839531_7
FeS cluster assembly scaffold protein NifU
K04488
-
-
0.000000000000000000000000000000000000000000000000000006648
192.0
View
LYD1_k127_2839531_8
Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( )
K02823
-
-
0.0000000000000000000000000000000000000000000000004599
184.0
View
LYD1_k127_2839531_9
Transcriptional regulator
-
-
-
0.0000000000000000000000000000000000000007789
153.0
View
LYD1_k127_2840134_0
The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
K03076
-
-
6.691e-215
673.0
View
LYD1_k127_2840134_1
Required for chromosome condensation and partitioning
K03529
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284
575.0
View
LYD1_k127_2840134_10
Binds to the 23S rRNA
K02876
-
-
0.000000000000000000000000000000000000000000000003315
176.0
View
LYD1_k127_2840134_11
signal-transduction protein containing cAMP-binding and CBS domains
-
-
-
0.000000000000000000000000000000000000000000000009281
175.0
View
LYD1_k127_2840134_12
Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
K00406,K01011,K07112
-
2.8.1.1,2.8.1.2
0.0000000000000000000000000000000000000000000003108
176.0
View
LYD1_k127_2840134_13
Ribosomal protein L17
K02879
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904
-
0.000000000000000000000000000000000000000001187
162.0
View
LYD1_k127_2840134_14
This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
K02881
-
-
0.00000000000000000000000000000000000000876
147.0
View
LYD1_k127_2840134_15
Sulphur transport
K07112
-
-
0.0000000000000000000000000000000000007001
145.0
View
LYD1_k127_2840134_16
TM2 domain
-
-
-
0.00000000000000000000000000000000009055
137.0
View
LYD1_k127_2840134_17
One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
K02518
GO:0001871,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0009986,GO:0030246,GO:0030247,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:2001065
-
0.000000000000000000000000000000001229
130.0
View
LYD1_k127_2840134_18
One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
K02994
-
-
0.000000000000000000005086
93.0
View
LYD1_k127_2840134_19
Ribosomal protein L36
K02919
-
-
0.0000000000000009021
76.0
View
LYD1_k127_2840134_2
PFAM FAD linked oxidase domain protein
K00104
-
1.1.3.15
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009542
497.0
View
LYD1_k127_2840134_20
Ribosomal protein L30p/L7e
K02907
-
-
0.000000001022
61.0
View
LYD1_k127_2840134_3
DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
K03040
-
2.7.7.6
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097
362.0
View
LYD1_k127_2840134_4
TIGRFAM methionine aminopeptidase, type I
K01265
-
3.4.11.18
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002972
327.0
View
LYD1_k127_2840134_5
One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
K02986
GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004264
281.0
View
LYD1_k127_2840134_6
This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
K02933
GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.00000000000000000000000000000000000000000000000000000000000000001507
228.0
View
LYD1_k127_2840134_7
Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
K02988
-
-
0.0000000000000000000000000000000000000000000000000000000000001031
216.0
View
LYD1_k127_2840134_8
Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
K02948
-
-
0.00000000000000000000000000000000000000000000000000000000002213
207.0
View
LYD1_k127_2840134_9
Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
K02952
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.0000000000000000000000000000000000000000000000002999
178.0
View
LYD1_k127_2846474_0
Aminotransferase class I and II
K10206
-
2.6.1.83
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002964
559.0
View
LYD1_k127_2846474_1
Branched-chain amino acid transport system / permease component
K01997
GO:0003333,GO:0003674,GO:0005215,GO:0005304,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006855,GO:0006865,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015173,GO:0015175,GO:0015179,GO:0015188,GO:0015190,GO:0015192,GO:0015238,GO:0015318,GO:0015658,GO:0015711,GO:0015801,GO:0015803,GO:0015804,GO:0015807,GO:0015818,GO:0015820,GO:0015823,GO:0015829,GO:0015849,GO:0015893,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0042221,GO:0042493,GO:0043090,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0089718,GO:0098655,GO:0098656,GO:0098657,GO:0098713,GO:0098739,GO:1902475,GO:1903714,GO:1903785,GO:1903825,GO:1905039
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009162
369.0
View
LYD1_k127_2846474_2
Branched-chain amino acid ATP-binding cassette transporter
K01995,K01998
GO:0003333,GO:0003674,GO:0005215,GO:0005304,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006855,GO:0006865,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015173,GO:0015175,GO:0015179,GO:0015188,GO:0015192,GO:0015238,GO:0015318,GO:0015658,GO:0015711,GO:0015801,GO:0015803,GO:0015804,GO:0015807,GO:0015818,GO:0015823,GO:0015829,GO:0015849,GO:0015893,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0042221,GO:0042493,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098655,GO:0098656,GO:1902475,GO:1903714,GO:1903785,GO:1903825,GO:1905039
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002491
321.0
View
LYD1_k127_2846474_3
ATPases associated with a variety of cellular activities
K01996
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001356
280.0
View
LYD1_k127_2846474_4
Branched-chain amino acid ATP-binding cassette transporter
K01995
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000001825
264.0
View
LYD1_k127_2846474_5
ABC-type antimicrobial peptide transport system, permease component
K02004
-
-
0.000000000000000000000000000000000000000000000000000000000002606
220.0
View
LYD1_k127_2846474_6
7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
K00950
-
2.7.6.3
0.000000000000000000000000000000000000000000007191
168.0
View
LYD1_k127_2846474_7
TIGRFAM 40-residue YVTN family beta-propeller repeat
-
-
-
0.00000005438
64.0
View
LYD1_k127_2877570_0
Cell shape determining protein MreB Mrl
K03569
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002105
323.0
View
LYD1_k127_2877570_1
Glycosyl transferases group 1
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000001197
239.0
View
LYD1_k127_2877570_2
PFAM Glycosyl transferase, group 1
-
-
-
0.000000000000000000000000000000000000000000000000000001588
207.0
View
LYD1_k127_2877570_3
Ami_3
K01448
-
3.5.1.28
0.00000000000000000000000000000000000000000002075
175.0
View
LYD1_k127_2877570_4
Glycosyltransferase like family 2
K12992
-
-
0.00000000000000000000000000000000000008184
153.0
View
LYD1_k127_2877570_5
Glycosyltransferase Family 4
-
-
-
0.000000000000000000000004376
110.0
View
LYD1_k127_2877570_6
PFAM Response regulator receiver domain
K07658
-
-
0.00000000375
68.0
View
LYD1_k127_2877570_7
Psort location Cytoplasmic, score
-
-
-
0.0000001111
55.0
View
LYD1_k127_2879385_0
SMART Elongator protein 3 MiaB NifB
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002515
574.0
View
LYD1_k127_2879385_1
Lipocalin-like domain
-
-
-
0.000000000000000000000000000000000000000000000000000000000001474
213.0
View
LYD1_k127_2879385_2
Domain of unknown function (DUF4833)
-
-
-
0.00000003997
59.0
View
LYD1_k127_2900730_0
catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR
K13924
-
2.1.1.80,3.1.1.61
1.743e-300
973.0
View
LYD1_k127_2900730_1
glycosyltransferase 36 associated
K00702,K13688
-
2.4.1.20
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001488
510.0
View
LYD1_k127_2900730_2
PAS fold
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000009051
265.0
View
LYD1_k127_2900730_3
part of a sulfur-relay system
K11179
-
-
0.00000000000000000000000000000000001881
138.0
View
LYD1_k127_2901731_0
The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
K03701
-
-
4.772e-315
989.0
View
LYD1_k127_2901731_1
PFAM Bacterial extracellular solute-binding proteins, family 5 Middle
K02035,K13893
-
-
1.82e-217
687.0
View
LYD1_k127_2901731_10
Putative S-adenosyl-L-methionine-dependent methyltransferase
-
-
-
0.00000000008601
71.0
View
LYD1_k127_2901731_11
Cupin domain
-
-
-
0.000000003527
61.0
View
LYD1_k127_2901731_12
ubiE/COQ5 methyltransferase family
-
-
-
0.000000004842
66.0
View
LYD1_k127_2901731_2
PFAM NAD-dependent epimerase dehydratase
K08678
-
4.1.1.35
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104
542.0
View
LYD1_k127_2901731_3
[glutamate-ammonia-ligase] adenylyltransferase activity
K00982
GO:0000166,GO:0000287,GO:0000820,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006521,GO:0006541,GO:0006542,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0008882,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0010565,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0017076,GO:0019222,GO:0019752,GO:0030554,GO:0031323,GO:0032553,GO:0032555,GO:0032559,GO:0033238,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046872,GO:0050789,GO:0050794,GO:0051171,GO:0062012,GO:0065007,GO:0070566,GO:0071704,GO:0080090,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
2.7.7.42,2.7.7.89
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002029
539.0
View
LYD1_k127_2901731_4
PFAM Binding-protein-dependent transport system inner membrane component
K02033
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002206
413.0
View
LYD1_k127_2901731_5
PFAM Binding-protein-dependent transport system inner membrane component
K02034
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006057
391.0
View
LYD1_k127_2901731_6
Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
K00762
-
2.4.2.10
0.00000000000000000000000000000000000000000000000000000000000000000000000001446
254.0
View
LYD1_k127_2901731_7
ADP-glyceromanno-heptose 6-epimerase activity
-
-
-
0.0000000000000000000533
99.0
View
LYD1_k127_2901731_8
4Fe-4S binding domain
-
-
-
0.000000000000001234
78.0
View
LYD1_k127_2901731_9
Thioredoxin
K03671
-
-
0.000000000000005087
83.0
View
LYD1_k127_2942161_0
Glycine zipper 2TM domain
-
-
-
0.0000000000000000000000000000000000000000187
157.0
View
LYD1_k127_2942161_1
Cytochrome C oxidase, cbb3-type, subunit III
K08906
-
-
0.000000000000000000000000002218
115.0
View
LYD1_k127_2942161_2
-
-
-
-
0.000000000000000556
81.0
View
LYD1_k127_2942161_3
PLD-like domain
K06131
-
-
0.0007259
45.0
View
LYD1_k127_2959161_0
ATPase, P-type (transporting), HAD superfamily, subfamily IC
K17686
-
3.6.3.54
2.178e-197
635.0
View
LYD1_k127_2959161_1
CAAX prenyl protease N-terminal, five membrane helices
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003774
419.0
View
LYD1_k127_2959161_2
Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
K06941
-
2.1.1.192
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001564
353.0
View
LYD1_k127_2959161_3
peptidyl-prolyl cis-trans isomerase
-
-
-
0.00000000000000000000000000000000000003217
147.0
View
LYD1_k127_2959161_4
Haemolysin-type calcium-binding repeat (2 copies)
-
-
-
0.000000000000000000000000000000000000108
162.0
View
LYD1_k127_2959161_5
Tetratricopeptide repeat
-
-
-
0.0000000000000000004425
96.0
View
LYD1_k127_2959161_6
Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
-
-
-
0.0000000000002875
71.0
View
LYD1_k127_2962228_0
The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
K01696
-
4.2.1.20
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434
572.0
View
LYD1_k127_2962228_1
PFAM binding-protein-dependent transport systems inner membrane component
K02038
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004366
424.0
View
LYD1_k127_2962228_2
Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
K02036
-
3.6.3.27
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001905
412.0
View
LYD1_k127_2962228_3
probably responsible for the translocation of the substrate across the membrane
K02037
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004257
392.0
View
LYD1_k127_2962228_4
Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
K01963
-
2.1.3.15,6.4.1.2
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005035
387.0
View
LYD1_k127_2962228_5
Mur ligase, middle domain protein
K11754
-
6.3.2.12,6.3.2.17
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002955
322.0
View
LYD1_k127_2962228_6
cAMP phosphodiesterases class-II
K01120
-
3.1.4.17
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005616
288.0
View
LYD1_k127_2962228_7
The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
K01695
-
4.2.1.20
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009986
286.0
View
LYD1_k127_2962228_8
Plays a role in the regulation of phosphate uptake
K02039
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000001039
266.0
View
LYD1_k127_2975164_0
Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB)
K00768
GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008939,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0017144,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042364,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
2.4.2.21
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000351
467.0
View
LYD1_k127_2975164_1
Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
K02015
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001524
311.0
View
LYD1_k127_2975164_2
ABC transporter
K02013
-
3.6.3.34
0.00000000000000000000000000000000000000000000000000000005863
205.0
View
LYD1_k127_2975164_3
Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate
K02231
-
2.7.1.156,2.7.7.62
0.00000000000000000000000000000000000000000000000000001847
193.0
View
LYD1_k127_2975164_4
Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
K02233
-
2.7.8.26
0.0000000000000000000000000000000000000000237
161.0
View
LYD1_k127_2975164_5
PFAM periplasmic binding protein
K02016
-
-
0.0000000000000000000003889
99.0
View
LYD1_k127_2978663_0
Pyridoxal-phosphate dependent enzyme
K06001
-
4.2.1.20
4.082e-225
704.0
View
LYD1_k127_2978663_1
PFAM Phosphate-selective porin O and P
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004506
392.0
View
LYD1_k127_2978663_10
Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
K00567,K13531
-
2.1.1.63
0.00000000000000000000000000000007349
131.0
View
LYD1_k127_2978663_11
-
-
-
-
0.0000000000000000000000000004854
119.0
View
LYD1_k127_2978663_12
Protein of unknown function DUF134
-
-
-
0.00000000000000000000000003902
110.0
View
LYD1_k127_2978663_13
Antioxidant, AhpC TSA family
-
-
-
0.0000000000001226
74.0
View
LYD1_k127_2978663_16
Thioredoxin-like
-
-
-
0.00002133
50.0
View
LYD1_k127_2978663_2
Belongs to the cysteine synthase cystathionine beta- synthase family
K01738
-
2.5.1.47
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009964
387.0
View
LYD1_k127_2978663_3
Phospholipase, patatin family
K07001
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000005009
279.0
View
LYD1_k127_2978663_4
Belongs to the TrpF family
K01817
-
5.3.1.24
0.0000000000000000000000000000000000000000000000000000000000000000000000316
246.0
View
LYD1_k127_2978663_5
ATP cone domain
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000002501
241.0
View
LYD1_k127_2978663_6
Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
K09457
-
1.7.1.13
0.000000000000000000000000000000000000000000000000000001583
198.0
View
LYD1_k127_2978663_7
Dinitrogenase iron-molybdenum cofactor
-
-
-
0.0000000000000000000000000000000000000000181
155.0
View
LYD1_k127_2978663_8
Protein of unknown function (DUF3617)
-
-
-
0.00000000000000000000000000000000003786
138.0
View
LYD1_k127_2978663_9
Arginine-tRNA-protein transferase, N terminus
K21420
-
2.3.2.29
0.0000000000000000000000000000000002521
141.0
View
LYD1_k127_2992578_0
Molecular chaperone. Has ATPase activity
K04079
-
-
3.852e-268
839.0
View
LYD1_k127_2992578_1
HI0933-like protein
K07007
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007176
439.0
View
LYD1_k127_2992578_2
Cytochrome c3
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002203
329.0
View
LYD1_k127_2992578_3
Sugar (and other) transporter
K03446
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000006244
244.0
View
LYD1_k127_2992578_4
nucleoside-triphosphate diphosphatase activity
K06287
-
-
0.0000000000000000000000000000000000000000000000000007662
190.0
View
LYD1_k127_2992578_5
SMART Cold shock protein
K03704
-
-
0.000000000000000000000000007154
110.0
View
LYD1_k127_2992578_6
metalloendopeptidase activity
K03799
-
-
0.00000000000000000000000003445
120.0
View
LYD1_k127_2992578_7
denitrification pathway
-
-
-
0.000000003353
60.0
View
LYD1_k127_3016003_0
Catalyzes the synthesis of GMP from XMP
K01951
GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659
6.3.5.2
1.227e-246
769.0
View
LYD1_k127_3016003_1
Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
K01662
-
2.2.1.7
1.067e-236
750.0
View
LYD1_k127_3016003_10
Activator of Hsp90 ATPase homolog 1-like protein
-
-
-
0.00008333
51.0
View
LYD1_k127_3016003_2
Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
K00088
-
1.1.1.205
1.458e-231
724.0
View
LYD1_k127_3016003_3
Arginyl tRNA synthetase N terminal dom
K01887
-
6.1.1.19
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006822
509.0
View
LYD1_k127_3016003_4
Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
K00826
-
2.6.1.42
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004264
476.0
View
LYD1_k127_3016003_5
Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322
439.0
View
LYD1_k127_3016003_6
AAA domain, putative AbiEii toxin, Type IV TA system
K01990
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008317
357.0
View
LYD1_k127_3016003_7
Polyprenyl synthetase
K00795,K13789
-
2.5.1.1,2.5.1.10,2.5.1.29
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000389
314.0
View
LYD1_k127_3016003_8
Transport permease protein
K01992
-
-
0.00000000000000000000000000000000000000000000000000000000002145
215.0
View
LYD1_k127_3016003_9
Cytochrome c7 and related cytochrome c
-
-
-
0.00000000000000000001106
95.0
View
LYD1_k127_3041004_0
Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
K00286
-
1.5.1.2
0.0000000000000000000000000000000000000000000000000000000000000000000000000009776
262.0
View
LYD1_k127_3041004_1
Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
K06997
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000002355
252.0
View
LYD1_k127_3041004_2
DivIVA protein
K04074
-
-
0.000000000000000000000000000000000000000000000000000000000002894
211.0
View
LYD1_k127_3041004_3
histidine-tRNA ligase activity
K01892
-
6.1.1.21
0.000000000000000000000000000000000000000000000000000000001994
203.0
View
LYD1_k127_3041004_4
LysE type translocator
-
-
-
0.000000000000000000000000000000005247
130.0
View
LYD1_k127_3041004_5
YGGT family
K02221
-
-
0.00000000000000000000000000000004231
128.0
View
LYD1_k127_3045864_0
SMART Elongator protein 3 MiaB NifB
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006973
449.0
View
LYD1_k127_3045864_1
MlaC protein
K07323
-
-
0.0000000000000000000000000000000000000000000000000000000000000003924
225.0
View
LYD1_k127_3045864_2
Pyruvoyl-dependent arginine decarboxylase (PvlArgDC)
K02626
-
4.1.1.19
0.000000000000000000000000000000000000000000000000000000000000003164
223.0
View
LYD1_k127_3045864_3
-
-
-
-
0.0000000000000000000000000000000000000000000000000000000000003626
222.0
View
LYD1_k127_3045864_4
MlaD protein
K02067
-
-
0.000000000000000000000000000000000000000000000000000000000008167
210.0
View
LYD1_k127_3045864_5
ABC transporter
K02065
-
-
0.00000000000000000000000000001021
122.0
View
LYD1_k127_3045864_6
Belongs to the deoxyhypusine synthase family
K00809
-
2.5.1.46
0.000001686
51.0
View
LYD1_k127_3078021_0
Outer membrane efflux protein
-
-
-
0.00000000001256
78.0
View
LYD1_k127_3078021_1
HlyD membrane-fusion protein of T1SS
-
-
-
0.000000000104
69.0
View
LYD1_k127_3079532_0
Belongs to the UDP-glucose GDP-mannose dehydrogenase family
K00012
-
1.1.1.22
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002103
588.0
View
LYD1_k127_3079532_1
UDP-N-acetylglucosamine 2-epimerase
K01791
-
5.1.3.14
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596
491.0
View
LYD1_k127_3079532_10
GlcNAc-PI de-N-acetylase
K01463
-
-
0.000000000000000000002892
103.0
View
LYD1_k127_3079532_2
transferase activity, transferring glycosyl groups
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004197
329.0
View
LYD1_k127_3079532_3
Glycosyl transferase family 2
-
-
-
0.0000000000000000000000000000000000000000000000000000002315
199.0
View
LYD1_k127_3079532_4
Domain of unknown function (DUF296)
-
-
-
0.0000000000000000000000000000000000000000000000000000005084
196.0
View
LYD1_k127_3079532_5
Polysaccharide deacetylase
-
-
-
0.000000000000000000000000000000000000000000000000000003575
201.0
View
LYD1_k127_3079532_6
protein tyrosine phosphatase activity
K01104,K19302
-
3.1.3.48,3.6.1.27
0.000000000000000000000000000000000000000000000000001113
190.0
View
LYD1_k127_3079532_7
glycogen (starch) synthase activity
-
-
-
0.000000000000000000000000000000000000000000000000008114
195.0
View
LYD1_k127_3079532_8
Glycosyl transferase 4-like domain
-
-
-
0.00000000000000000000000000000000000000000006156
174.0
View
LYD1_k127_3079532_9
3-demethylubiquinone-9 3-O-methyltransferase activity
K00568
GO:0003674,GO:0003824,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0006950,GO:0006970,GO:0006972,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008289,GO:0008689,GO:0008757,GO:0009058,GO:0009108,GO:0009628,GO:0009651,GO:0009987,GO:0016740,GO:0016741,GO:0032259,GO:0042180,GO:0042181,GO:0042538,GO:0043167,GO:0043168,GO:0043431,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051186,GO:0051188,GO:0061542,GO:0071704,GO:1901576,GO:1901611,GO:1901661,GO:1901663
2.1.1.222,2.1.1.64
0.0000000000000000000000000000000000000001539
160.0
View
LYD1_k127_3082688_0
7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase activity
K11779,K11780,K11781,K11784,K18285
GO:0003674,GO:0003824,GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016740,GO:0016765,GO:0044237,GO:0044249,GO:0044689,GO:0051186,GO:0051188
1.21.98.1,2.5.1.120,2.5.1.77
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237
492.0
View
LYD1_k127_3082688_1
7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase activity
K11779,K11780,K11781,K11784,K18285
GO:0003674,GO:0003824,GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016740,GO:0016765,GO:0044237,GO:0044249,GO:0044689,GO:0051186,GO:0051188
1.21.98.1,2.5.1.120,2.5.1.77
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004216
467.0
View
LYD1_k127_3082688_10
Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
K01874
-
6.1.1.10
0.00000000000000000000000000263
112.0
View
LYD1_k127_3082688_11
Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
K02963
-
-
0.000000000000000000000001714
104.0
View
LYD1_k127_3082688_12
Protein of unknown function (DUF507)
-
-
-
0.000000000000000000000003263
104.0
View
LYD1_k127_3082688_13
4Fe-4S binding domain
-
-
-
0.000000000000000009756
84.0
View
LYD1_k127_3082688_2
Pyridine nucleotide-disulphide oxidoreductase
K00384
-
1.8.1.9
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004197
355.0
View
LYD1_k127_3082688_3
Diguanylate cyclase
-
-
-
0.0000000000000000000000000000000000000000000000000000000009538
225.0
View
LYD1_k127_3082688_4
PFAM Polysulphide reductase, NrfD
K00185
-
-
0.00000000000000000000000000000000000000000003415
163.0
View
LYD1_k127_3082688_5
Single-strand binding protein family
K03111
-
-
0.0000000000000000000000000000000000000000005136
160.0
View
LYD1_k127_3082688_6
SMART HNH nuclease
K07451
-
-
0.000000000000000000000000000000000000003857
150.0
View
LYD1_k127_3082688_7
Pyridoxamine 5'-phosphate oxidase like
-
-
-
0.0000000000000000000000000000000000005347
144.0
View
LYD1_k127_3082688_8
Protein of unknown function (DUF507)
-
-
-
0.0000000000000000000000000002262
117.0
View
LYD1_k127_3082688_9
Binds together with S18 to 16S ribosomal RNA
K02990
-
-
0.00000000000000000000000000115
115.0
View
LYD1_k127_3093729_0
Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force
K15987
-
3.6.1.1
0.0
1017.0
View
LYD1_k127_3093729_1
nitrate reductase activity
K03390,K16887,K18930
-
1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077
401.0
View
LYD1_k127_3093729_2
Domain in cystathionine beta-synthase and other proteins.
-
-
-
0.000000000000000000000001805
108.0
View
LYD1_k127_3093729_3
PFAM methyl-viologen-reducing hydrogenase delta subunit
K16886
-
-
0.0000000006119
60.0
View
LYD1_k127_3178570_0
Type II/IV secretion system protein
K02669
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008815
527.0
View
LYD1_k127_3178570_1
Domain of unknown function (DUF4388)
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278
452.0
View
LYD1_k127_3178570_2
-
-
-
-
0.000000000000000000005264
97.0
View
LYD1_k127_3230697_0
TIGRFAM Carbon-monoxide dehydrogenase, catalytic subunit
K00198
-
1.2.7.4
1.989e-262
822.0
View
LYD1_k127_3230697_1
aldehyde ferredoxin oxidoreductase activity
K03738
-
1.2.7.5
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003519
490.0
View
LYD1_k127_3230697_2
-
-
-
-
0.000000000000000000000000000000000000002912
154.0
View
LYD1_k127_326105_0
tRNA synthetases class II (D, K and N)
K04567
-
6.1.1.6
2.196e-217
685.0
View
LYD1_k127_326105_1
MacB-like periplasmic core domain
K09808
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133
438.0
View
LYD1_k127_326105_2
Histidine kinase
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001567
357.0
View
LYD1_k127_326105_3
Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner
K09810
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000002136
247.0
View
LYD1_k127_326105_4
PFAM response regulator receiveR
-
-
-
0.0000000000000000000000000000000000000000000000000000000000003163
214.0
View
LYD1_k127_335729_0
Radical SAM domain protein
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001519
302.0
View
LYD1_k127_335729_2
Belongs to the peptidase S26 family
K13280
-
3.4.21.89
0.00000003294
65.0
View
LYD1_k127_335729_3
Coenzyme PQQ synthesis protein D (PqqD)
-
-
-
0.000001053
54.0
View
LYD1_k127_3417802_0
spermidine synthase activity
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002616
400.0
View
LYD1_k127_3417802_1
UbiA prenyltransferase family
K03179
-
2.5.1.39
0.000000000000000000000000000000000000000000000000000000000001285
213.0
View
LYD1_k127_341997_0
Belongs to the citrate synthase family
K01647
-
2.3.3.1
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008911
567.0
View
LYD1_k127_341997_1
Protein of unknown function (DUF1810)
-
-
-
0.0000000000000000000000000000000000000000000000007484
177.0
View
LYD1_k127_341997_2
Heavy metal translocating P-type atpase
-
-
-
0.0000000000000000003671
98.0
View
LYD1_k127_3430129_0
Belongs to the UbiD family
K03182,K16239
-
4.1.1.61,4.1.1.98
1.245e-211
668.0
View
LYD1_k127_3430129_1
Surface antigen
K07277
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004149
593.0
View
LYD1_k127_3430129_10
Mycobacterial 4 TMS phage holin, superfamily IV
K08972
-
-
0.00000000000000000000004374
102.0
View
LYD1_k127_3430129_11
Evidence 4 Homologs of previously reported genes of
-
-
-
0.0000000000409
65.0
View
LYD1_k127_3430129_2
protein secretion
K09800
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003191
533.0
View
LYD1_k127_3430129_3
Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism
K00990
-
2.7.7.59
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005131
475.0
View
LYD1_k127_3430129_4
TIGRFAM cysteine
K12339
-
2.5.1.47
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007563
423.0
View
LYD1_k127_3430129_5
UTRA
K03710
-
-
0.0000000000000000000000000000001773
133.0
View
LYD1_k127_3430129_6
helix_turn_helix, mercury resistance
-
-
-
0.00000000000000000000000000006884
119.0
View
LYD1_k127_3430129_7
This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control
K04764
-
-
0.000000000000000000000000001794
113.0
View
LYD1_k127_3430129_8
Cold shock
K03704
-
-
0.000000000000000000000000002764
111.0
View
LYD1_k127_3431096_0
NADH-quinone oxidoreductase
K00341
-
1.6.5.3
2.024e-244
770.0
View
LYD1_k127_3431096_1
TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M
K00342
-
1.6.5.3
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095
610.0
View
LYD1_k127_3431096_10
NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
K00332
-
1.6.5.3
0.0000000000000000000000000000000000000000000000000000001217
200.0
View
LYD1_k127_3431096_11
4Fe-4S dicluster domain
-
-
-
0.0000000000000000000000000000000000000000009578
162.0
View
LYD1_k127_3431096_12
Thioredoxin-like [2Fe-2S] ferredoxin
K00334
-
1.6.5.3
0.000000000000000000000000000000000000006652
153.0
View
LYD1_k127_3431096_13
NADH-ubiquinone/plastoquinone oxidoreductase chain 6
K00339
-
1.6.5.3
0.0000000000000000000000000000000000000975
147.0
View
LYD1_k127_3431096_14
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
K00330
-
1.6.5.3
0.000000000000000000000000000000000001352
146.0
View
LYD1_k127_3431096_15
Bacterial regulatory protein, Fis family
-
-
-
0.000000000000000000000000000000000508
134.0
View
LYD1_k127_3431096_16
NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
K00340
-
1.6.5.3
0.000000000000000000000000000002293
127.0
View
LYD1_k127_3431096_2
Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
K00123,K05299,K22341
-
1.17.1.10,1.17.1.11,1.17.1.9
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268
566.0
View
LYD1_k127_3431096_3
PFAM Respiratory-chain NADH dehydrogenase domain 51 kDa subunit
K00335
-
1.6.5.3
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008408
533.0
View
LYD1_k127_3431096_4
NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
K00333,K13378
-
1.6.5.3
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005486
522.0
View
LYD1_k127_3431096_5
response regulator
K02481
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001567
495.0
View
LYD1_k127_3431096_6
NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
K00343
-
1.6.5.3
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000252
454.0
View
LYD1_k127_3431096_7
NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
K00337
-
1.6.5.3
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004465
419.0
View
LYD1_k127_3431096_8
histidine kinase, HAMP
K02482
-
2.7.13.3
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001488
355.0
View
LYD1_k127_3431096_9
NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
K00331
-
1.6.5.3
0.0000000000000000000000000000000000000000000000000000000000000000000000002313
252.0
View
LYD1_k127_3467062_0
Outer membrane efflux protein
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003334
399.0
View
LYD1_k127_3467062_1
YtkA-like
-
-
-
0.0000001331
55.0
View
LYD1_k127_3469592_0
Domain of unknown function (DUF3458_C) ARM repeats
K01256,K08776
-
3.4.11.2
0.0
1286.0
View
LYD1_k127_3469592_1
A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
K02469
-
5.99.1.3
0.0
1059.0
View
LYD1_k127_3469592_10
PFAM GGDEF domain containing protein
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000111
270.0
View
LYD1_k127_3469592_11
endonuclease III
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000006086
256.0
View
LYD1_k127_3469592_12
inositol monophosphate 1-phosphatase activity
K01082,K01092
-
3.1.3.25,3.1.3.7
0.000000000000000000000000000000000000000000000000000000000000006221
225.0
View
LYD1_k127_3469592_13
Specifically methylates the N7 position of a guanine in 16S rRNA
K03501
-
2.1.1.170
0.000000000000000000000000000000000000000000006975
170.0
View
LYD1_k127_3469592_14
translation release factor activity
-
-
-
0.0000000000000000000000000000000000000008378
151.0
View
LYD1_k127_3469592_15
1,4-alpha-glucan branching enzyme activity
-
-
-
0.000000000000000000000000000001772
126.0
View
LYD1_k127_3469592_16
RDD family
-
-
-
0.00000000000000000000000002343
113.0
View
LYD1_k127_3469592_17
SMART Cold shock protein
K03704
-
-
0.000000000000000000000001952
103.0
View
LYD1_k127_3469592_18
succinate dehydrogenase activity
K00242,K00246
-
-
0.0000000000000000009225
92.0
View
LYD1_k127_3469592_19
exodeoxyribonuclease I activity
-
-
-
0.0000000000001043
74.0
View
LYD1_k127_3469592_2
NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
K03495
GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363
-
4.455e-268
839.0
View
LYD1_k127_3469592_20
-
-
-
-
0.000000008711
59.0
View
LYD1_k127_3469592_21
succinate dehydrogenase
K00241
-
-
0.00004733
48.0
View
LYD1_k127_3469592_22
rod shape-determining protein mreB
K03569
-
-
0.0002643
43.0
View
LYD1_k127_3469592_3
COG0058 Glucan phosphorylase
-
-
-
2.008e-258
807.0
View
LYD1_k127_3469592_4
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007196
562.0
View
LYD1_k127_3469592_5
Belongs to the Glu Leu Phe Val dehydrogenases family
K00260,K00261,K00262
-
1.4.1.2,1.4.1.3,1.4.1.4
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001794
437.0
View
LYD1_k127_3469592_6
Insulinase (Peptidase family M16)
K07263
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004249
434.0
View
LYD1_k127_3469592_7
Peptidase M16 domain protein
K07263
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006655
409.0
View
LYD1_k127_3469592_8
Tetratricopeptide repeat
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000204
378.0
View
LYD1_k127_3469592_9
Iron-storage protein
K02217
-
1.16.3.2
0.00000000000000000000000000000000000000000000000000000000000000000000000000000002674
271.0
View
LYD1_k127_3485201_0
Radical SAM domain protein
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000003042
242.0
View
LYD1_k127_3485201_1
PFAM transglutaminase domain protein
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000008855
231.0
View
LYD1_k127_3490044_0
diaminopimelate decarboxylase activity
K01581
-
4.1.1.17
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005287
492.0
View
LYD1_k127_3490044_1
Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009021
442.0
View
LYD1_k127_3490044_2
spermidine synthase activity
K00797
GO:0003674,GO:0003824,GO:0004766,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008216,GO:0008295,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0016740,GO:0016765,GO:0034641,GO:0042401,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576
2.5.1.16
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000332
417.0
View
LYD1_k127_3490044_3
Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
K13292
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000612
375.0
View
LYD1_k127_3490044_4
PFAM flavin reductase domain protein, FMN-binding
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024
292.0
View
LYD1_k127_3510976_0
TIGRFAM transporter, hydrophobe amphiphile efflux-1 (HAE1) family
K03296,K18138
-
-
0.0
1791.0
View
LYD1_k127_3510976_1
Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
K01872
-
6.1.1.7
4.003e-310
973.0
View
LYD1_k127_3510976_10
His Kinase A (phosphoacceptor) domain
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000001303
249.0
View
LYD1_k127_3510976_11
OsmC-like protein
K07397
-
-
0.0000000000000000000000000000000000000000000000000000004856
196.0
View
LYD1_k127_3510976_12
Bacterial regulatory proteins, tetR family
-
-
-
0.00000000000000000000000000000000000000000000000004468
192.0
View
LYD1_k127_3510976_13
CHRD domain
-
-
-
0.000000000000000000000000000000000000001872
153.0
View
LYD1_k127_3510976_14
Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
K01975
GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008104,GO:0008150,GO:0009966,GO:0010646,GO:0010738,GO:0023051,GO:0033036,GO:0034237,GO:0044424,GO:0044444,GO:0044464,GO:0048583,GO:0050789,GO:0050794,GO:0051018,GO:0051179,GO:0065007,GO:1902531
3.1.4.58
0.000000000000000000000000000000000002141
149.0
View
LYD1_k127_3510976_15
Belongs to the CinA family
K03742,K03743
-
3.5.1.42
0.0000000000000000000000000000001431
130.0
View
LYD1_k127_3510976_16
Phosphatidylglycerophosphatase A
K01095
-
3.1.3.27
0.00000000000000000000000000003027
124.0
View
LYD1_k127_3510976_17
PFAM Smr protein MutS2
-
-
-
0.0000000000000000000000000006758
122.0
View
LYD1_k127_3510976_18
PQ loop repeat
K15383
-
-
0.00000000000000000000147
98.0
View
LYD1_k127_3510976_19
protein-glutamate methylesterase activity
K00575,K03412,K03413,K07719
-
2.1.1.80,3.1.1.61,3.5.1.44
0.0000000000000001063
88.0
View
LYD1_k127_3510976_2
Domain of unknown function (DUF4139)
-
-
-
7.41e-198
630.0
View
LYD1_k127_3510976_20
-
-
-
-
0.0000000000000001945
82.0
View
LYD1_k127_3510976_21
Modulates RecA activity
K03565,K19002
GO:0003674,GO:0005488,GO:0005515,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0019899,GO:0031668,GO:0033554,GO:0043086,GO:0044092,GO:0050790,GO:0050896,GO:0051716,GO:0065007,GO:0065009,GO:0071496
2.4.1.337
0.000000000000001461
82.0
View
LYD1_k127_3510976_22
Glucose / Sorbosone dehydrogenase
-
-
-
0.0006629
48.0
View
LYD1_k127_3510976_3
TIGRFAM RND efflux system, outer membrane lipoprotein, NodT family
K18139
-
-
2.284e-194
619.0
View
LYD1_k127_3510976_4
Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
K03585
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365
572.0
View
LYD1_k127_3510976_5
ABC1 family
K03688
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006
578.0
View
LYD1_k127_3510976_6
Type II/IV secretion system protein
K02669
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581
499.0
View
LYD1_k127_3510976_7
Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
K03553
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002452
497.0
View
LYD1_k127_3510976_8
Mycolic acid cyclopropane synthetase
K00574
-
2.1.1.79
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002697
484.0
View
LYD1_k127_3510976_9
phosphorelay sensor kinase activity
K03406,K07710
-
2.7.13.3
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003801
329.0
View
LYD1_k127_3529631_0
Chemotaxis sensory transducer
K03406
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007163
424.0
View
LYD1_k127_3529631_1
Signal transducing histidine kinase, homodimeric domain
K03407
-
2.7.13.3
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001898
342.0
View
LYD1_k127_3529631_2
catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR
K03412
-
3.1.1.61,3.5.1.44
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007431
314.0
View
LYD1_k127_3529631_3
Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
K00575
-
2.1.1.80
0.0000000000000000000000000000000000000000000000127
182.0
View
LYD1_k127_3529631_4
Nitrogen fixation master sensor histidine kinase, PAS domain-containing
K02668,K07708,K07709
-
2.7.13.3
0.00000000000000000000000000000000000000000007012
184.0
View
LYD1_k127_3529631_5
cheY-homologous receiver domain
K03413
-
-
0.0000000000000000000000000000000000000008014
151.0
View
LYD1_k127_3529631_6
PFAM CheW domain protein
K03408
-
-
0.000000000000000000000000000000000000004883
152.0
View
LYD1_k127_3529631_7
phosphorelay signal transduction system
-
-
-
0.0000000000000000000000000000944
119.0
View
LYD1_k127_3529631_8
Histidine carboxylase PI chain
K01590
-
4.1.1.22
0.00000000000000000000000004665
109.0
View
LYD1_k127_3529631_9
PBS lyase HEAT domain protein repeat-containing protein
-
-
-
0.00000000000000001054
95.0
View
LYD1_k127_3532519_0
PFAM Tetratricopeptide TPR_1 repeat-containing protein
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092
496.0
View
LYD1_k127_3532519_1
PFAM Tetratricopeptide TPR_1 repeat-containing protein
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002425
415.0
View
LYD1_k127_3532519_2
TPR repeat-containing protein
-
-
-
0.0000000000000000000000000000000000000000000000000000000005376
223.0
View
LYD1_k127_3532519_3
Bacterial membrane protein, YfhO
-
-
-
0.0000000000000000000000000000000000000000003964
180.0
View
LYD1_k127_3570353_0
Telomere recombination
K04656
-
-
5.933e-246
784.0
View
LYD1_k127_3570353_1
Hydrogenase formation hypA family
K04654
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006191
449.0
View
LYD1_k127_3570353_10
PAS domain containing protein
K03406,K13924,K14986
-
2.1.1.80,2.7.13.3,3.1.1.61
0.000000000000000000008115
94.0
View
LYD1_k127_3570353_11
-
-
-
-
0.000000000000000009234
88.0
View
LYD1_k127_3570353_12
TIGRFAM YihY family protein (not ribonuclease BN)
K07058
-
-
0.000000000000001124
87.0
View
LYD1_k127_3570353_13
Putative zinc- or iron-chelating domain
K06940
-
-
0.00006468
51.0
View
LYD1_k127_3570353_2
GTPase that plays an essential role in the late steps of ribosome biogenesis
K03977
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163
406.0
View
LYD1_k127_3570353_3
AIR synthase related protein, N-terminal domain
K04655
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000076
399.0
View
LYD1_k127_3570353_4
metal-dependent phosphohydrolase, HD sub domain
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002027
372.0
View
LYD1_k127_3570353_5
Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
K03474
GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617
2.6.99.2
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438
321.0
View
LYD1_k127_3570353_6
Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
K17758,K17759
-
4.2.1.136,5.1.99.6
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002317
286.0
View
LYD1_k127_3570353_7
TIGRFAM peptidase T-like protein
K01258
-
3.4.11.4
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000222
287.0
View
LYD1_k127_3570353_8
Beta-lactamase superfamily domain
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000001075
252.0
View
LYD1_k127_3570353_9
Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
K00997
-
2.7.8.7
0.000000000000000000000000004414
114.0
View
LYD1_k127_3604134_0
ATP synthase alpha/beta family, nucleotide-binding domain
K02118
-
-
4.166e-204
643.0
View
LYD1_k127_3604134_1
Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit
K02117
GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008324,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0034220,GO:0036442,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044464,GO:0044769,GO:0046961,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132,GO:1902600
3.6.3.14,3.6.3.15
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354
557.0
View
LYD1_k127_3604134_10
Protein of unknown function (DUF2892)
-
-
-
0.000000000006471
72.0
View
LYD1_k127_3604134_2
ABC-type transport system involved in lipoprotein release permease component
K02004
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001982
427.0
View
LYD1_k127_3604134_3
PFAM V-type ATPase 116 kDa
K02123
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000009517
267.0
View
LYD1_k127_3604134_4
ATP synthase subunit D
K02120
-
-
0.00000000000000000000000000000000000000000000000000000000000000005197
229.0
View
LYD1_k127_3604134_5
CHASE
K02488,K21009
-
2.7.7.65
0.00000000000000000000000000000000000000000000000000000000000002274
227.0
View
LYD1_k127_3604134_7
Produces ATP from ADP in the presence of a proton gradient across the membrane
K02121
-
-
0.00000000000000000000000000004792
123.0
View
LYD1_k127_3604134_8
Produces ATP from ADP in the presence of a proton gradient across the membrane
K02122
-
-
0.000000000000000000000000005615
114.0
View
LYD1_k127_3604134_9
PFAM H transporting two-sector ATPase C subunit
K02124
-
-
0.000000000000000000000002205
104.0
View
LYD1_k127_360482_0
heme-copper terminal oxidase activity
K02274
-
1.9.3.1
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002403
415.0
View
LYD1_k127_360482_1
protein SCO1 SenC PrrC involved in biogenesis of respiratory and photosynthetic systems
K07152
-
-
0.000000000000000000000000000000000000000000000000006728
190.0
View
LYD1_k127_360482_2
.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
-
-
-
0.00000001747
56.0
View
LYD1_k127_3609145_0
In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
K00951
-
2.7.6.5
2.445e-265
834.0
View
LYD1_k127_3609145_1
Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
K03072
GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004196
457.0
View
LYD1_k127_3609145_2
DHH family
K07462
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004137
445.0
View
LYD1_k127_3609145_3
Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
K03074
GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000263
335.0
View
LYD1_k127_3609145_4
transferase activity, transferring glycosyl groups
-
-
-
0.00000000000000000000000000000000000000000000000000000000000001317
229.0
View
LYD1_k127_3609145_5
Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
K03981
-
5.3.4.1
0.0000000000000000000000000000000000000000000000000000000000002117
220.0
View
LYD1_k127_3609145_6
group 2 family protein
-
-
-
0.00000000000000000000000000000000000000000000000000000000004644
212.0
View
LYD1_k127_3609145_7
PFAM Tetratricopeptide TPR_1 repeat-containing protein
-
-
-
0.0000000000000000000000000000000000000000000000000001697
210.0
View
LYD1_k127_3609145_8
Uncharacterized conserved protein (DUF2304)
-
-
-
0.00000000008566
67.0
View
LYD1_k127_3609145_9
PFAM type II and III secretion system protein
K02453
-
-
0.0000006529
59.0
View
LYD1_k127_365083_0
PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
K18330
-
1.12.1.3
0.000000000000000000000000000000000000000000000001869
185.0
View
LYD1_k127_365083_1
Ferredoxin
K17992
-
1.12.1.3
0.00000000000000000000000000000000000001638
148.0
View
LYD1_k127_365083_2
The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
K02437
-
-
0.00001345
52.0
View
LYD1_k127_3661064_0
Transketolase, pyrimidine binding domain
K00615
-
2.2.1.1
1.928e-266
832.0
View
LYD1_k127_3661064_1
PFAM Prenyltransferase squalene oxidase
K01852,K06045
-
4.2.1.129,5.4.99.17,5.4.99.7
4.409e-242
765.0
View
LYD1_k127_3661064_10
YdjC-like protein
-
-
-
0.000000000000000000000000000000000000000000000000004281
193.0
View
LYD1_k127_3661064_11
Ribulose-phosphate 3 epimerase family
K01783
-
5.1.3.1
0.000000000000000000000000000000000123
140.0
View
LYD1_k127_3661064_12
MlaC protein
K07323
-
-
0.0000000000000000000000000000000002093
140.0
View
LYD1_k127_3661064_13
PFAM RNA recognition motif
-
-
-
0.000000000000000000000004975
106.0
View
LYD1_k127_3661064_14
EamA-like transporter family
-
-
-
0.0000000000000000002211
94.0
View
LYD1_k127_3661064_15
Ribosomal protein S21
K02970
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904
-
0.0000000000000006062
78.0
View
LYD1_k127_3661064_16
Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
K14652
-
3.5.4.25,4.1.99.12
0.00000000000001747
74.0
View
LYD1_k127_3661064_17
Belongs to the small heat shock protein (HSP20) family
K13993
-
-
0.00007437
47.0
View
LYD1_k127_3661064_2
Radical SAM
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002994
570.0
View
LYD1_k127_3661064_3
TIGRFAM Hopanoid biosynthesis associated RND transporter like protein HpnN
K07003
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361
572.0
View
LYD1_k127_3661064_4
PFAM NAD-dependent epimerase dehydratase
K00091
-
1.1.1.219
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003585
412.0
View
LYD1_k127_3661064_5
Radical SAM domain protein
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061
395.0
View
LYD1_k127_3661064_6
Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
K00616
-
2.2.1.2
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004824
375.0
View
LYD1_k127_3661064_7
Flavin reductase like domain
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000004033
271.0
View
LYD1_k127_3661064_8
-
-
-
-
0.000000000000000000000000000000000000000000000000000000000001714
221.0
View
LYD1_k127_3661064_9
6-phosphogluconolactonase
K01057
GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009051,GO:0009117,GO:0009987,GO:0016787,GO:0016788,GO:0017057,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046496,GO:0051156,GO:0051186,GO:0052689,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564
3.1.1.31
0.000000000000000000000000000000000000000000000000000245
194.0
View
LYD1_k127_3669617_0
ABC transporter
K06158
-
-
3.763e-230
725.0
View
LYD1_k127_3669617_1
Aconitase C-terminal domain
K01681
-
4.2.1.3
0.00000000000000000000000000000000000000003144
153.0
View
LYD1_k127_3669617_2
O COG3187 Heat shock protein
-
-
-
0.000000000003222
76.0
View
LYD1_k127_3695952_0
Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
K01866
-
6.1.1.1
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004808
511.0
View
LYD1_k127_3695952_1
part of an ABC transporter complex. Responsible for energy coupling to the transport system
K02006,K16787
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002813
327.0
View
LYD1_k127_3695952_10
PIN domain
-
-
-
0.00000000009615
68.0
View
LYD1_k127_3695952_2
Uncharacterised protein family UPF0047
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000002468
259.0
View
LYD1_k127_3695952_3
-
-
-
-
0.000000000000000000000000000000000000000000000000000001702
211.0
View
LYD1_k127_3695952_4
NUDIX domain
K01515
-
3.6.1.13
0.00000000000000000000000000000000000000000004589
168.0
View
LYD1_k127_3695952_5
-
-
-
-
0.0000000000000000000000000000000000000007635
153.0
View
LYD1_k127_3695952_6
MgtC family
K07507
-
-
0.0000000000000000000000000000000000003157
148.0
View
LYD1_k127_3695952_8
Cytochrome c
-
-
-
0.0000000000000000005247
101.0
View
LYD1_k127_3695952_9
Multicopper oxidase
-
-
-
0.0000000000004941
79.0
View
LYD1_k127_3700479_0
Protein conserved in bacteria
-
-
-
1.025e-228
734.0
View
LYD1_k127_3700479_1
In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
K02335
-
2.7.7.7
6.14e-228
734.0
View
LYD1_k127_3700479_10
PFAM PP-loop domain protein
K06864
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000002804
276.0
View
LYD1_k127_3700479_11
Tetratricopeptide repeat
K05807
-
-
0.0000000000000000000000000000000000000000000000000000000000000000005756
238.0
View
LYD1_k127_3700479_12
lactate metabolic process
K11473,K18928
-
-
0.0000000000000000000000000000000000000000000000000000000000000000005951
244.0
View
LYD1_k127_3700479_13
Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
K02838
-
-
0.000000000000000000000000000000000000000000000000000000000000000004572
231.0
View
LYD1_k127_3700479_14
Diguanylate cyclase phosphodiesterase with PAS PAC sensor(S)
-
-
-
0.00000000000000000000000000000000000000000000000000000000001316
226.0
View
LYD1_k127_3700479_15
Sirohaem biosynthesis protein central
K02304
-
1.3.1.76,4.99.1.4
0.0000000000000000000000000000000000000000000002787
175.0
View
LYD1_k127_3700479_16
This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
K03572
GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0030554,GO:0032300,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034641,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363,GO:1990391
-
0.00000000000000000000000000000000000000000298
158.0
View
LYD1_k127_3700479_17
cysteine-type peptidase activity
K19223
-
-
0.0000000000000000000000000000000000000002037
163.0
View
LYD1_k127_3700479_18
cyclic nucleotide binding
K10914
-
-
0.0000000000000000000000000000000009928
132.0
View
LYD1_k127_3700479_19
Prokaryotic dksA/traR C4-type zinc finger
K06204
-
-
0.0000000000000000000000000003336
124.0
View
LYD1_k127_3700479_2
TIGRFAM ribonuclease, Rne Rng family
K08300,K08301
-
3.1.26.12
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416
594.0
View
LYD1_k127_3700479_20
-
-
-
-
0.000000000004254
67.0
View
LYD1_k127_3700479_21
PFAM amino acid-binding ACT domain protein
-
-
-
0.00000000005688
68.0
View
LYD1_k127_3700479_22
Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
K00616
-
2.2.1.2
0.00000000008871
64.0
View
LYD1_k127_3700479_23
Domain of unknown function (DUF4912)
K09942
-
-
0.0000002817
62.0
View
LYD1_k127_3700479_24
PFAM PpiC-type peptidyl-prolyl cis-trans isomerase
K03769
-
5.2.1.8
0.00006526
55.0
View
LYD1_k127_3700479_3
Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
K02492
-
1.2.1.70
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004055
451.0
View
LYD1_k127_3700479_4
Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps
K01749
GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
2.5.1.61
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141
380.0
View
LYD1_k127_3700479_5
Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
K00939
-
2.7.4.3
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001291
369.0
View
LYD1_k127_3700479_6
Catalyzes the reversible phosphorylation of UMP to UDP
K09903
-
2.7.4.22
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452
359.0
View
LYD1_k127_3700479_7
Belongs to the universal ribosomal protein uS2 family
K02967
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002365
340.0
View
LYD1_k127_3700479_8
PFAM cytochrome c assembly protein
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002574
305.0
View
LYD1_k127_3700479_9
Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
K02357
GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429
293.0
View
LYD1_k127_3751302_0
PFAM AMP-dependent synthetase and ligase
K01908
-
6.2.1.17
0.0
1022.0
View
LYD1_k127_3751302_1
2-methylcitrate dehydratase
K01720
-
4.2.1.79
5.409e-250
779.0
View
LYD1_k127_3751302_10
Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
K00014
GO:0000166,GO:0003674,GO:0003824,GO:0004764,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576,GO:1901615
1.1.1.25
0.000000000000000000000000000000000000000000000000000000000000000000000000000002667
273.0
View
LYD1_k127_3751302_11
Displays ATPase and GTPase activities
K06958
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000004255
273.0
View
LYD1_k127_3751302_12
peptidyl-tyrosine sulfation
-
-
-
0.000000000000000000000000000000000000000000000000000002125
204.0
View
LYD1_k127_3751302_13
Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
K05808
-
-
0.000000000000000000000000000000000000000000000000001567
188.0
View
LYD1_k127_3751302_14
Prokaryotic N-terminal methylation motif
K02456
-
-
0.000000000000000000000000000000000000000000000000007211
184.0
View
LYD1_k127_3751302_15
OstA-like protein
K09774
-
-
0.0000000000000000000000000000000000002615
145.0
View
LYD1_k127_3751302_16
Putative diguanylate phosphodiesterase
-
-
-
0.00000000000000000000000000000000001002
139.0
View
LYD1_k127_3751302_17
Belongs to the CDP-alcohol phosphatidyltransferase class-I family
K08744
-
2.7.8.41
0.0000000000000000000000000000007414
128.0
View
LYD1_k127_3751302_18
PASTA
K12132
-
2.7.11.1
0.00000000009781
71.0
View
LYD1_k127_3751302_19
competence protein
-
-
-
0.00000009468
64.0
View
LYD1_k127_3751302_2
Sigma54 specific transcriptional regulator, Fis family
-
-
-
7.95e-212
673.0
View
LYD1_k127_3751302_21
Lipopolysaccharide-assembly, LptC-related
-
-
-
0.0001684
50.0
View
LYD1_k127_3751302_22
type IV pilus secretin PilQ
K02666
-
-
0.0009536
48.0
View
LYD1_k127_3751302_3
also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity
K01659
-
2.3.3.5
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001964
572.0
View
LYD1_k127_3751302_4
Sigma-54 factor, Activator interacting domain (AID)
K03092
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005288
517.0
View
LYD1_k127_3751302_5
Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
K01841,K03417
-
4.1.3.30,5.4.2.9
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037
454.0
View
LYD1_k127_3751302_6
Protein of unknown function (DUF512)
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000294
449.0
View
LYD1_k127_3751302_7
Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
K03500
-
2.1.1.176
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007171
341.0
View
LYD1_k127_3751302_8
Ribulose-phosphate 3 epimerase family
K01783
-
5.1.3.1
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004992
286.0
View
LYD1_k127_3751302_9
ATPases associated with a variety of cellular activities
K06861
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001836
286.0
View
LYD1_k127_378679_0
TIGRFAM Phage SPO1 DNA polymerase-related protein
K21929
-
3.2.2.27
0.0000000000000000000000000000000014
139.0
View
LYD1_k127_378679_1
protein complex oligomerization
-
-
-
0.000000000000000000000006017
107.0
View
LYD1_k127_378679_2
Chaperonin 10 Kd subunit
-
-
-
0.0000000000000001194
80.0
View
LYD1_k127_378679_3
Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter
K02116
-
-
0.00000001363
59.0
View
LYD1_k127_3935240_0
-
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005169
475.0
View
LYD1_k127_3935240_1
Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
K00948
-
2.7.6.1
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002011
426.0
View
LYD1_k127_3935240_10
His Kinase A (phosphoacceptor) domain
-
-
-
0.00000000000000000576
92.0
View
LYD1_k127_3935240_2
Tetratricopeptide repeat
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006912
415.0
View
LYD1_k127_3935240_3
Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
K00919
GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515
2.7.1.148
0.000000000000000000000000000000000000000000000000000000000000000004248
235.0
View
LYD1_k127_3935240_4
O-methyltransferase family 3
-
-
-
0.0000000000000000000000000000000000000000000000000000000003185
210.0
View
LYD1_k127_3935240_5
The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
K01056
GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101
3.1.1.29
0.000000000000000000000000000000000000000000000000000000001813
204.0
View
LYD1_k127_3935240_6
This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
K02897
GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.0000000000000000000000000000000000000000000000000000007486
199.0
View
LYD1_k127_3935240_7
Belongs to the UPF0312 family
-
-
-
0.0000000000000000000000000000000000000000002444
168.0
View
LYD1_k127_3935240_8
Histidine kinase
K02660,K11525
-
-
0.000000000000000000000000000000000004391
145.0
View
LYD1_k127_398076_0
C-terminal, D2-small domain, of ClpB protein
K03696
-
-
0.0
1097.0
View
LYD1_k127_398076_1
Belongs to the formate--tetrahydrofolate ligase family
K01938
-
6.3.4.3
0.0
1077.0
View
LYD1_k127_398076_10
Histone deacetylase domain
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006403
374.0
View
LYD1_k127_398076_11
Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate
K00940
GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564
2.7.4.6
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484
350.0
View
LYD1_k127_398076_12
Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
K05540
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247
338.0
View
LYD1_k127_398076_13
Uncharacterized protein family UPF0004
K18707
-
2.8.4.5
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001557
312.0
View
LYD1_k127_398076_14
Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
K11175
-
2.1.2.2
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002808
296.0
View
LYD1_k127_398076_15
response regulator
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000009232
269.0
View
LYD1_k127_398076_16
histidine kinase, HAMP
K07642
-
2.7.13.3
0.00000000000000000000000000000000000000000000000000000000000000000003037
249.0
View
LYD1_k127_398076_17
SurA N-terminal domain
K03771
-
5.2.1.8
0.000000000000000000000000000000000000000000000000000000000000000003456
237.0
View
LYD1_k127_398076_18
Thioredoxin-like [2Fe-2S] ferredoxin
K00334
-
1.6.5.3
0.0000000000000000000000000000000000000000000000000008656
187.0
View
LYD1_k127_398076_19
Belongs to the CDP-alcohol phosphatidyltransferase class-I family
K00995
-
2.7.8.5
0.000000000000000000000000000000000000000000000000003798
187.0
View
LYD1_k127_398076_2
PFAM Respiratory-chain NADH dehydrogenase domain 51 kDa subunit
K00335
-
1.6.5.3
1.234e-254
797.0
View
LYD1_k127_398076_20
Hydrogenase maturation protease
K03605
-
-
0.000000000000000000000000000000000000000000000003843
177.0
View
LYD1_k127_398076_21
cyclic nucleotide-binding
-
-
-
0.000000000000000000000000000000000000000000002128
169.0
View
LYD1_k127_398076_22
ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
K19221
-
2.5.1.17
0.0000000000000000000000000000000000000001391
156.0
View
LYD1_k127_398076_23
Domain of unknown function (DUF4416)
-
-
-
0.000000000000000000000000000000000000002548
156.0
View
LYD1_k127_398076_24
Thioredoxin-like
-
-
-
0.0000000000000000000000000000000000402
139.0
View
LYD1_k127_398076_25
Probable RNA and SrmB- binding site of polymerase A
K00970,K00974
-
2.7.7.19,2.7.7.72
0.00000000000000000000001529
114.0
View
LYD1_k127_398076_26
-
-
-
-
0.00000886
48.0
View
LYD1_k127_398076_3
Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
K00123
-
1.17.1.9
1.823e-231
727.0
View
LYD1_k127_398076_4
molybdopterin oxidoreductase Fe4S4 region
K05299
-
1.17.1.10
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005602
514.0
View
LYD1_k127_398076_5
Myo-inositol-1-phosphate synthase
K01858
-
5.5.1.4
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001552
512.0
View
LYD1_k127_398076_6
Ion channel
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099
416.0
View
LYD1_k127_398076_7
Belongs to the NiFe NiFeSe hydrogenase large subunit family
K00437,K05922,K06281
-
1.12.2.1,1.12.5.1,1.12.99.6
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004778
401.0
View
LYD1_k127_398076_8
Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
K06168
-
2.8.4.3
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004215
402.0
View
LYD1_k127_398076_9
Catalyzes the reversible oxidation of malate to oxaloacetate
K00024
-
1.1.1.37
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005541
396.0
View
LYD1_k127_4034163_0
Cytochrome bd terminal oxidase subunit II
K00426
-
1.10.3.14
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000396
329.0
View
LYD1_k127_4034163_1
Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
K01803
GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616
5.3.1.1
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591
295.0
View
LYD1_k127_4034163_2
TIGRFAM transcriptional regulator, Rrf2 family
-
-
-
0.00000000000000000000000000000000000000000001747
165.0
View
LYD1_k127_4034163_3
diguanylate cyclase
-
-
-
0.00000000000000000000000000000000002644
153.0
View
LYD1_k127_4034163_4
P-P-bond-hydrolysis-driven protein transmembrane transporter activity
K03075
GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0022857,GO:0022884,GO:0031522,GO:0032978,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0042887,GO:0043952,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680
-
0.000000000000000000001933
98.0
View
LYD1_k127_4036876_0
Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
K01868
-
6.1.1.3
7.04e-283
881.0
View
LYD1_k127_4036876_1
Belongs to the alpha-IPM synthase homocitrate synthase family
K02594
-
2.3.3.14
9.483e-229
713.0
View
LYD1_k127_4036876_10
Carrier of the growing fatty acid chain in fatty acid biosynthesis
K02078
-
-
0.0000000000000000000000000000001539
124.0
View
LYD1_k127_4036876_11
Belongs to the bacterial ribosomal protein bL35 family
K02916
-
-
0.000000000000000004032
87.0
View
LYD1_k127_4036876_12
mercury ion transmembrane transporter activity
K07213
-
-
0.0000000000000006051
79.0
View
LYD1_k127_4036876_13
HicB_like antitoxin of bacterial toxin-antitoxin system
-
-
-
0.0000000000004346
71.0
View
LYD1_k127_4036876_14
periplasmic or secreted lipoprotein
-
-
-
0.00000002358
58.0
View
LYD1_k127_4036876_2
TIGRFAM phenylalanyl-tRNA synthetase, beta subunit
K01890
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464
6.1.1.20
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152
498.0
View
LYD1_k127_4036876_3
COGs COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductase
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001964
479.0
View
LYD1_k127_4036876_4
Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type
K01889
-
6.1.1.20
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005921
462.0
View
LYD1_k127_4036876_5
Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
K09458
-
2.3.1.179
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004281
344.0
View
LYD1_k127_4036876_6
Evidence 2a Function of homologous gene experimentally demonstrated in an other organism
K00059
-
1.1.1.100
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001638
335.0
View
LYD1_k127_4036876_7
histidine kinase, HAMP
K02482
-
2.7.13.3
0.0000000000000000000000000000000000000000000000000000000003871
220.0
View
LYD1_k127_4036876_8
IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
K02520
-
-
0.0000000000000000000000000000000000000000000000000981
183.0
View
LYD1_k127_4036876_9
Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
K02887
GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904
-
0.0000000000000000000000000000000000000003549
151.0
View
LYD1_k127_4041125_0
Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
-
-
-
0.0
1950.0
View
LYD1_k127_4041125_1
COG0526, thiol-disulfide isomerase and thioredoxins
-
-
-
0.00000001348
57.0
View
LYD1_k127_4106949_0
PFAM AICARFT IMPCHase bienzyme
K00602
-
2.1.2.3,3.5.4.10
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001905
552.0
View
LYD1_k127_4106949_1
This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009098
537.0
View
LYD1_k127_4106949_2
PFAM metal-dependent phosphohydrolase, HD sub domain
K07023
-
-
0.0000000000000000000000001265
106.0
View
LYD1_k127_4112394_0
DNA-directed DNA polymerase
K02337
-
2.7.7.7
0.0
1172.0
View
LYD1_k127_4112394_1
Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA
K01962
-
2.1.3.15,6.4.1.2
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158
439.0
View
LYD1_k127_4112394_2
COG3209 Rhs family protein
-
-
-
0.000000000000008507
76.0
View
LYD1_k127_4117777_0
DEAD DEAH box helicase
K06877
-
-
4.877e-214
689.0
View
LYD1_k127_4117777_1
type II secretion system protein E
K02454
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002758
566.0
View
LYD1_k127_4117777_11
Acetyltransferase (GNAT) domain
-
-
-
0.00000000000000000000000000000000000002178
156.0
View
LYD1_k127_4117777_12
ABC-2 type transporter
K09690
-
-
0.000000000000000000000000000000000004639
147.0
View
LYD1_k127_4117777_13
transferase activity, transferring glycosyl groups
-
-
-
0.00000000000000000000000000000005315
136.0
View
LYD1_k127_4117777_14
protein-disulfide reductase activity
-
-
-
0.000000000000000000000000002159
116.0
View
LYD1_k127_4117777_15
Adenylyl- / guanylyl cyclase, catalytic domain
-
-
-
0.00000000000000000000004254
110.0
View
LYD1_k127_4117777_16
FHA domain
-
-
-
0.00000000001382
75.0
View
LYD1_k127_4117777_17
Fimbrial assembly protein (PilN)
-
-
-
0.0000000009365
71.0
View
LYD1_k127_4117777_18
-
-
-
-
0.000000005053
57.0
View
LYD1_k127_4117777_19
General secretion pathway protein
K02457
-
-
0.000000008829
64.0
View
LYD1_k127_4117777_2
Type II secretion system (T2SS), protein F
K02455
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099
396.0
View
LYD1_k127_4117777_20
fimbrial assembly
K02461
-
-
0.00000002016
67.0
View
LYD1_k127_4117777_21
Prokaryotic N-terminal methylation motif
K02458
-
-
0.000003021
54.0
View
LYD1_k127_4117777_22
Type II secretion system (T2SS), protein M subtype b
-
-
-
0.000006199
56.0
View
LYD1_k127_4117777_23
Prokaryotic N-terminal methylation motif
K02456,K02457,K02458,K02459,K02655,K10926
-
-
0.0001184
53.0
View
LYD1_k127_4117777_24
-
-
-
-
0.0005457
50.0
View
LYD1_k127_4117777_3
Glycosyl transferase, family 2
K12992
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141
321.0
View
LYD1_k127_4117777_4
ATPases associated with a variety of cellular activities
K09689,K09691
-
3.6.3.38
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002012
330.0
View
LYD1_k127_4117777_5
serine threonine protein kinase
K12132
-
2.7.11.1
0.00000000000000000000000000000000000000000000000000000000000000004748
243.0
View
LYD1_k127_4117777_6
Peptidylprolyl isomerase
K01802
-
5.2.1.8
0.0000000000000000000000000000000000000000000000000000017
202.0
View
LYD1_k127_4117777_7
Cytidine and deoxycytidylate deaminase zinc-binding region
K01493
-
3.5.4.12
0.000000000000000000000000000000000000000000000003474
179.0
View
LYD1_k127_4117777_8
Type II secretion system (T2SS), protein K
K02460
-
-
0.0000000000000000000000000000000000000000001391
173.0
View
LYD1_k127_4117777_9
Sulfotransferase family
-
-
-
0.0000000000000000000000000000000000000000002542
168.0
View
LYD1_k127_4138180_0
Adenylyl- / guanylyl cyclase, catalytic domain
K01768
-
4.6.1.1
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685
526.0
View
LYD1_k127_4138180_1
alcohol dehydrogenase
K00008
-
1.1.1.14
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004915
415.0
View
LYD1_k127_4138180_10
Flp pilus assembly protein RcpC/CpaB
K02279
-
-
0.00074
51.0
View
LYD1_k127_4138180_2
Glucose dehydrogenase C-terminus
K00008
-
1.1.1.14
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000676
393.0
View
LYD1_k127_4138180_3
Protein of unknown function DUF72
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005234
297.0
View
LYD1_k127_4138180_4
Polysaccharide deacetylase
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000003599
241.0
View
LYD1_k127_4138180_5
Sigma 54 modulation protein / S30EA ribosomal protein
-
-
-
0.00000000000000000000000000000000000000000000000000009452
192.0
View
LYD1_k127_4138180_6
Belongs to the small heat shock protein (HSP20) family
K13993
-
-
0.0000000000000000000000000000000000000000001477
164.0
View
LYD1_k127_4138180_7
Cupin 2, conserved barrel domain protein
-
-
-
0.000000000000000000000000000000000004556
142.0
View
LYD1_k127_4138180_8
-
-
-
-
0.0000000000000006068
82.0
View
LYD1_k127_4138180_9
ResB-like family
K07399
-
-
0.00008185
48.0
View
LYD1_k127_4145398_0
Pyruvate phosphate dikinase, PEP
K01006
-
2.7.9.1
0.0
1463.0
View
LYD1_k127_4145398_1
Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
K00134
-
1.2.1.12
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002905
561.0
View
LYD1_k127_4145398_2
Sugar (and other) transporter
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003167
378.0
View
LYD1_k127_4145398_3
DNA-binding protein VF530
-
-
-
0.000000000000000000000000000009006
119.0
View
LYD1_k127_4145398_4
S1 domain
K00243
-
-
0.0000000000000000000000004519
106.0
View
LYD1_k127_4145398_5
(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
-
-
-
0.0000000000000000002228
90.0
View
LYD1_k127_4145398_6
(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
-
-
-
0.000000000000002484
78.0
View
LYD1_k127_4145398_7
cellulose binding
-
-
-
0.00001521
59.0
View
LYD1_k127_4145398_8
PilZ domain
-
-
-
0.00008728
52.0
View
LYD1_k127_4189529_0
ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
K01338
-
3.4.21.53
2.51e-276
863.0
View
LYD1_k127_4189529_1
membrane transporter protein
K07090
-
-
9.638e-196
616.0
View
LYD1_k127_4189529_2
isochorismatase
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000276
436.0
View
LYD1_k127_4189529_3
-
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000001306
263.0
View
LYD1_k127_4189529_4
Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
K00954
-
2.7.7.3
0.0000000000000000000000000000000000000000000000000001028
190.0
View
LYD1_k127_4189529_5
PFAM UspA
-
-
-
0.00000000000000000000000000000000000000000000000001013
191.0
View
LYD1_k127_4189529_6
Conserved hypothetical protein 95
K08316
-
2.1.1.171
0.000000000000000000000000000001945
127.0
View
LYD1_k127_4195307_0
Belongs to the alpha-IPM synthase homocitrate synthase family
K01649
-
2.3.3.13
2.696e-236
740.0
View
LYD1_k127_4195307_1
Pyridoxal-phosphate dependent enzyme
K01733
-
4.2.3.1
1.085e-213
668.0
View
LYD1_k127_4195307_10
Cytidylyltransferase family
K00981
-
2.7.7.41
0.0000000000000000000000000000000000000000000000000000001774
203.0
View
LYD1_k127_4195307_11
Cation transporter/ATPase, N-terminus
K01537
-
3.6.3.8
0.0000000000000000000000000000000000000000000002729
171.0
View
LYD1_k127_4195307_12
ThiS family
K03636
-
-
0.00000000000000000000000000000000113
132.0
View
LYD1_k127_4195307_13
NIL
-
-
-
0.000000000000000000000000009561
113.0
View
LYD1_k127_4195307_14
PDZ DHR GLGF domain protein
K11749
-
-
0.000000000000000000505
87.0
View
LYD1_k127_4195307_15
His Kinase A (phosphoacceptor) domain
-
-
-
0.0000001765
61.0
View
LYD1_k127_4195307_16
LemA family
K03744
-
-
0.0000002624
57.0
View
LYD1_k127_4195307_17
curli production assembly transport component CsgG
-
-
-
0.000002817
60.0
View
LYD1_k127_4195307_2
Metalloenzyme superfamily
K15635
-
5.4.2.12
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005564
524.0
View
LYD1_k127_4195307_3
ACT domain
K00928
-
2.7.2.4
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006754
525.0
View
LYD1_k127_4195307_4
Belongs to the glycosyl hydrolase 57 family
K22451
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464
2.4.1.25
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000352
531.0
View
LYD1_k127_4195307_5
Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
K00931
-
2.7.2.11
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281
461.0
View
LYD1_k127_4195307_6
Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
K00099
GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576
1.1.1.267
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003818
423.0
View
LYD1_k127_4195307_7
K transport systems
K10716
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461
381.0
View
LYD1_k127_4195307_8
SNARE associated Golgi protein
K03975
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001995
322.0
View
LYD1_k127_4195307_9
Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
K00806
-
2.5.1.31
0.0000000000000000000000000000000000000000000000000000000000000000000000000003132
262.0
View
LYD1_k127_42300_0
ABC-type transport system involved in lipoprotein release permease component
K02004
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003616
535.0
View
LYD1_k127_42300_1
HlyD family secretion protein
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004033
474.0
View
LYD1_k127_42300_2
ABC-type antimicrobial peptide transport system, ATPase component
K02003
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005232
347.0
View
LYD1_k127_42300_3
MacB-like periplasmic core domain
K02004
-
-
0.000000000000000000000000000000000000000000000000000000004061
203.0
View
LYD1_k127_4236859_0
Molydopterin dinucleotide binding domain
K00123
-
1.17.1.9
0.0
1243.0
View
LYD1_k127_4236859_1
Molybdopterin oxidoreductase Fe4S4 domain
K00123
-
1.17.1.9
0.000000000000000000000000000000000000000000000000000000000000000000000001855
249.0
View
LYD1_k127_4236859_2
PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein
K00124
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000265
246.0
View
LYD1_k127_4236859_3
Histidine kinase-like ATPases
-
-
-
0.00000000005817
74.0
View
LYD1_k127_4236859_4
OmpA family
K02557
-
-
0.00008395
53.0
View
LYD1_k127_4236859_5
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
K07720
-
-
0.0001156
53.0
View
LYD1_k127_4269780_0
Belongs to the aldehyde dehydrogenase family
K13821
-
1.2.1.88,1.5.5.2
0.0
1074.0
View
LYD1_k127_4269780_1
Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
K03110
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461
353.0
View
LYD1_k127_4269780_2
PFAM Glycosyl hydrolase family 3 N terminal domain
K01207,K05349
-
3.2.1.21,3.2.1.52
0.0000000000000000000000000000000000000000000000000000000004346
220.0
View
LYD1_k127_4269780_3
NAD dependent epimerase dehydratase family protein
-
-
-
0.00000000000000000000000000000002631
138.0
View
LYD1_k127_4269780_4
Predicted membrane protein (DUF2318)
-
-
-
0.0000000000000000001495
93.0
View
LYD1_k127_4269780_5
Homologous to orf229 gp Streptococcus thermophilus bacteriophage Sfi19 gi 9632919 ref NP_049948.1
-
-
-
0.00000000000000001195
88.0
View
LYD1_k127_4280663_0
Alpha-acetolactate decarboxylase
K01575
-
4.1.1.5
0.000000000000000000000001012
113.0
View
LYD1_k127_4280663_1
PKD domain
K01179,K08651
-
3.2.1.4,3.4.21.66
0.00000000000000000000007907
109.0
View
LYD1_k127_4280663_2
COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains)
-
-
-
0.0000001333
61.0
View
LYD1_k127_4321031_0
COG1233 Phytoene dehydrogenase and related proteins
K09516,K09835
-
1.3.99.23,5.2.1.13
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007174
492.0
View
LYD1_k127_4321031_1
-
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001943
311.0
View
LYD1_k127_4321031_2
ABC transporter
K02003
-
-
0.00000000000000000000000000000000000000000000000000000000000000000002856
237.0
View
LYD1_k127_4354332_0
O-methyltransferase activity
-
-
-
4.334e-209
669.0
View
LYD1_k127_4354332_1
Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
K03086
-
-
1.103e-204
646.0
View
LYD1_k127_4354332_10
Sigma 54 modulation protein / S30EA ribosomal protein
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000009582
252.0
View
LYD1_k127_4354332_11
Chromate resistance exported protein
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000004314
248.0
View
LYD1_k127_4354332_12
Glycosyl transferases group 1
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000007152
255.0
View
LYD1_k127_4354332_13
nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA
-
-
-
0.000000000000000000000000000000000000000000000000000000000000009836
224.0
View
LYD1_k127_4354332_14
-
-
-
-
0.00000000000000000000000000000000000000000000000000000000007702
211.0
View
LYD1_k127_4354332_15
lyase activity
-
-
-
0.000000000000000000000000000000000000000000000000000000004094
205.0
View
LYD1_k127_4354332_16
Putative zinc- or iron-chelating domain
K06940
-
-
0.000000000000000000000000000000000000000000000000000000008029
207.0
View
LYD1_k127_4354332_17
TIGRFAM cell shape determining protein, MreB Mrl family
K03569
-
-
0.00000000000000000000000000000000000000000000000000000002585
199.0
View
LYD1_k127_4354332_18
Nitroreductase family
-
-
-
0.0000000000000000000000000000000000000000000000000000003091
198.0
View
LYD1_k127_4354332_19
shape-determining protein MreC
K03570
-
-
0.00000000000000000000000000000000000000000000001732
180.0
View
LYD1_k127_4354332_2
Thiamine pyrophosphate enzyme, central domain
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003505
582.0
View
LYD1_k127_4354332_20
Type I restriction enzyme R protein N terminus (HSDR_N)
-
-
-
0.000000000000000000000000000000000000000000006596
169.0
View
LYD1_k127_4354332_21
Histidine kinase A domain protein
K01768
-
4.6.1.1
0.00000000000000000000000000000000000000000001029
174.0
View
LYD1_k127_4354332_22
Belongs to the LOG family
K06966
-
3.2.2.10
0.0000000000000000000000000000000000000009305
154.0
View
LYD1_k127_4354332_23
LysM domain
-
-
-
0.0000000000000000000000000000000000004969
153.0
View
LYD1_k127_4354332_24
Type I restriction enzyme R protein N terminus (HSDR_N)
-
-
-
0.000000000000000000000000006018
117.0
View
LYD1_k127_4354332_25
PFAM Protein-tyrosine phosphatase, low molecular weight
K01104,K20201
-
3.1.3.48,3.9.1.2
0.00000000000000000000000000891
115.0
View
LYD1_k127_4354332_26
COG2203 FOG GAF domain
-
-
-
0.000004233
58.0
View
LYD1_k127_4354332_3
Penicillin-binding Protein dimerisation domain
K05515
-
3.4.16.4
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483
507.0
View
LYD1_k127_4354332_4
Belongs to the pirin family
K06911
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054
461.0
View
LYD1_k127_4354332_5
4 iron, 4 sulfur cluster binding
K07139
GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464,GO:0048037,GO:0051536,GO:0051539,GO:0051540
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006704
429.0
View
LYD1_k127_4354332_6
-
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003127
440.0
View
LYD1_k127_4354332_7
Peptidoglycan polymerase that is essential for cell wall elongation
K05837
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321
425.0
View
LYD1_k127_4354332_8
Methylenetetrahydrofolate reductase
K00297
GO:0003674,GO:0003824,GO:0004489,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114
1.5.1.20
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001391
317.0
View
LYD1_k127_4354332_9
4Fe-4S binding domain
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000003443
259.0
View
LYD1_k127_43992_0
Alpha amylase, catalytic domain
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009837
543.0
View
LYD1_k127_43992_1
An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
K03595
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006737
348.0
View
LYD1_k127_43992_2
Bifunctional nuclease
K08999
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000001311
241.0
View
LYD1_k127_43992_3
Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology
K00812
-
2.6.1.1
0.000000000000000000000000000000000000000000000000000000000000001427
221.0
View
LYD1_k127_43992_4
Involved in DNA repair and RecF pathway recombination
K03584
-
-
0.0000000000000000000000000000000000000000000000000007538
192.0
View
LYD1_k127_43992_5
6-phosphoglucan, water dikinase activity
K15535
GO:0000272,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0005976,GO:0005982,GO:0005983,GO:0006073,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009251,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016052,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016781,GO:0019200,GO:0019538,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044042,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044260,GO:0044262,GO:0044264,GO:0044267,GO:0044275,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046777,GO:0046835,GO:0051752,GO:0071704,GO:1901564,GO:1901575
2.7.9.5
0.000000000000000000000000000000000000000000000002939
180.0
View
LYD1_k127_43992_6
Prokaryotic dksA/traR C4-type zinc finger
K06204
-
-
0.000000000000000000000000000274
121.0
View
LYD1_k127_4407928_0
Virulence factor BrkB
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007642
304.0
View
LYD1_k127_4407928_1
retrograde transport, endosome to Golgi
K07095
-
-
0.000000000000000000000000000000000000000000000000000009968
193.0
View
LYD1_k127_4407928_2
Peptidase MA superfamily
-
-
-
0.000000000000000000000000000000000000000000000000154
192.0
View
LYD1_k127_4407928_3
Beta-Casp domain
K07576
-
-
0.000000000000000000000002314
104.0
View
LYD1_k127_4407928_4
Protein of unknown function (DUF1059)
-
-
-
0.00000001602
57.0
View
LYD1_k127_4437505_0
DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
K03046
GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234
2.7.7.6
0.0
2110.0
View
LYD1_k127_4437505_1
DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
K03043
-
2.7.7.6
0.0
1878.0
View
LYD1_k127_4437505_10
This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
K02358
-
-
0.00000000000000002461
81.0
View
LYD1_k127_4437505_11
Ribosomal protein L33
K02913
-
-
0.0000000000002434
72.0
View
LYD1_k127_4437505_12
P-P-bond-hydrolysis-driven protein transmembrane transporter activity
K03073
GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0040007,GO:0044425,GO:0044459,GO:0044464,GO:0071944
-
0.0000000000005997
70.0
View
LYD1_k127_4437505_2
phosphorelay signal transduction system
K07714
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372
407.0
View
LYD1_k127_4437505_3
Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
K02863
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004095
339.0
View
LYD1_k127_4437505_4
Participates in transcription elongation, termination and antitermination
K02601
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000001661
259.0
View
LYD1_k127_4437505_5
Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
K02867
-
-
0.000000000000000000000000000000000000000000000000000000000001011
212.0
View
LYD1_k127_4437505_6
Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
K02935
-
-
0.000000000000000000000000000000000000000000000000000003148
197.0
View
LYD1_k127_4437505_7
Histidine kinase
-
-
-
0.00000000000000000000000000000000000000000000000000009633
212.0
View
LYD1_k127_4437505_8
Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
K02864
-
-
0.00000000000000000000000000000000005153
140.0
View
LYD1_k127_4437505_9
Mut7-C RNAse domain
K09122
-
-
0.0000000000000000000000000000003657
128.0
View
LYD1_k127_4438974_0
Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
K03385
-
1.7.2.2
1.883e-257
800.0
View
LYD1_k127_4438974_1
Succinyl-CoA ligase like flavodoxin domain
K01905,K22224
-
6.2.1.13
7.817e-253
797.0
View
LYD1_k127_4438974_10
oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor
K00174,K00186
-
1.2.7.11,1.2.7.3,1.2.7.7
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000312
459.0
View
LYD1_k127_4438974_11
Participates in both transcription termination and antitermination
K02600
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004727
437.0
View
LYD1_k127_4438974_12
Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
K00145
-
1.2.1.38
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002521
435.0
View
LYD1_k127_4438974_13
Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
K01599
GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
4.1.1.37
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009321
436.0
View
LYD1_k127_4438974_14
Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
K00620
GO:0003674,GO:0003824,GO:0004042,GO:0004358,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006592,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
2.3.1.1,2.3.1.35
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218
409.0
View
LYD1_k127_4438974_15
one-carbon metabolic process
K00194,K00198
-
1.2.7.4,2.1.1.245
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003678
377.0
View
LYD1_k127_4438974_16
Pterin binding enzyme
K00548,K15023
-
2.1.1.13,2.1.1.258
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001874
373.0
View
LYD1_k127_4438974_17
Ami_3
K01448
-
3.5.1.28
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000535
336.0
View
LYD1_k127_4438974_18
Phage integrase, N-terminal SAM-like domain
K04763
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003518
328.0
View
LYD1_k127_4438974_19
belongs to the CobB CobQ family
K06873
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033
318.0
View
LYD1_k127_4438974_2
cell redox homeostasis
-
-
-
1.387e-209
664.0
View
LYD1_k127_4438974_20
Possible lysine decarboxylase
K06966
-
3.2.2.10
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001021
289.0
View
LYD1_k127_4438974_21
RNase_H superfamily
K07502
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001358
291.0
View
LYD1_k127_4438974_22
Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
K02654
-
3.4.23.43
0.00000000000000000000000000000000000000000000000000000000000000000000000002687
257.0
View
LYD1_k127_4438974_23
PFAM Rubrerythrin
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000005527
249.0
View
LYD1_k127_4438974_24
CO dehydrogenase/acetyl-CoA synthase complex beta subunit
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000003095
242.0
View
LYD1_k127_4438974_25
Signal transduction histidine kinase, nitrogen specific, NtrB
K07708
-
2.7.13.3
0.00000000000000000000000000000000000000000000000000000000000000002585
239.0
View
LYD1_k127_4438974_26
Appr-1'-p processing enzyme
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000003335
228.0
View
LYD1_k127_4438974_27
NapC/NirT cytochrome c family, N-terminal region
K15876
-
-
0.0000000000000000000000000000000000000000000000000000000000000004587
222.0
View
LYD1_k127_4438974_28
This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
K02871
-
-
0.0000000000000000000000000000000000000000000000000000000008022
203.0
View
LYD1_k127_4438974_29
Erythromycin esterase
K07100
GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944
-
0.00000000000000000000000000000000000000000000000000000006127
202.0
View
LYD1_k127_4438974_3
GTP-binding GTPase Middle Region
K03665
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005403
617.0
View
LYD1_k127_4438974_30
Belongs to the universal ribosomal protein uS9 family
K02996
-
-
0.00000000000000000000000000000000000000000001979
166.0
View
LYD1_k127_4438974_31
response regulator
-
-
-
0.0000000000000000000000000000000000009523
147.0
View
LYD1_k127_4438974_32
Required for maturation of 30S ribosomal subunits
K09748
GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576
-
0.000000000000000000000000000000000005742
141.0
View
LYD1_k127_4438974_33
iron-sulfur cluster assembly
-
-
-
0.000000000000000000000001907
104.0
View
LYD1_k127_4438974_34
Belongs to the rubredoxin family
-
GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0006091,GO:0008150,GO:0008152,GO:0008199,GO:0009055,GO:0009987,GO:0016491,GO:0022900,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0055114
-
0.00000000000000000000002516
100.0
View
LYD1_k127_4438974_35
TIGRFAM desulfoferrodoxin FeS4 iron-binding domain
K05919
-
1.15.1.2
0.000000003542
58.0
View
LYD1_k127_4438974_37
PFAM Cobalt transport protein
K16785
-
-
0.00008145
53.0
View
LYD1_k127_4438974_4
PFAM Radical SAM domain protein
K22227
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408
593.0
View
LYD1_k127_4438974_5
Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
K03655
-
3.6.4.12
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279
602.0
View
LYD1_k127_4438974_6
Glycyl-tRNA synthetase beta subunit
K01879
-
6.1.1.14
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003101
575.0
View
LYD1_k127_4438974_7
acetyl-CoA catabolic process
K00197
-
2.1.1.245
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002157
494.0
View
LYD1_k127_4438974_8
N-Acyl-D-aspartate D-glutamate deacylase
K06015
-
3.5.1.81
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000254
477.0
View
LYD1_k127_4438974_9
Glycyl-tRNA synthetase alpha subunit
K01878
-
6.1.1.14
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000274
464.0
View
LYD1_k127_4462533_0
PFAM Acetyl-CoA hydrolase transferase
K18122
-
-
1.184e-291
906.0
View
LYD1_k127_4462533_1
Belongs to the acetyltransferase family. ArgA subfamily
K00619,K14681
GO:0003674,GO:0003824,GO:0004042,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016043,GO:0016053,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0022607,GO:0040007,GO:0042450,GO:0042802,GO:0042803,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046983,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
2.3.1.1,4.3.2.1
0.0000000000000000000000000000000000000000000000000000000000000000001717
232.0
View
LYD1_k127_4462533_2
Oligopeptidase F
K08602
-
-
0.000000000000000000000000000000000000000000000000000000000002577
222.0
View
LYD1_k127_4462533_3
This protein specifically catalyzes the removal of signal peptides from prolipoproteins
K03101
-
3.4.23.36
0.000000000000000000000000000000008412
132.0
View
LYD1_k127_4462533_4
Protein of unknown function (DUF1189)
-
-
-
0.000000000000000000001424
104.0
View
LYD1_k127_4462533_5
response regulator, receiver
-
-
-
0.0000000009614
68.0
View
LYD1_k127_4503766_0
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001712
302.0
View
LYD1_k127_4503766_1
Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group
K02257
GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008495,GO:0009058,GO:0009987,GO:0015980,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0045333,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
2.5.1.141
0.000000000000000000000000000000000000000000000000000000000000000000002121
245.0
View
LYD1_k127_4503766_2
Histidine kinase-, DNA gyrase B-, and HSP90-like
-
-
-
0.0000000000000000000000000000000000000000000000000009723
204.0
View
LYD1_k127_4503766_3
Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B)
K02275,K02297
-
1.10.3.10,1.9.3.1
0.0000000000000000000000000000000000000000000001169
171.0
View
LYD1_k127_4503766_4
response regulator, receiver
-
-
-
0.000000000000000000000000000002189
138.0
View
LYD1_k127_4636231_0
PFAM Cytochrome c oxidase, subunit I
K04561
-
1.7.2.5
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001654
612.0
View
LYD1_k127_4636231_1
Cytochrome c
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001643
597.0
View
LYD1_k127_4636231_2
Protein of unknown function, DUF488
-
-
-
0.000000000000000000000000000000000000001053
151.0
View
LYD1_k127_4636231_3
COG0589 Universal stress protein UspA and related nucleotide-binding proteins
-
-
-
0.00000000009759
68.0
View
LYD1_k127_47137_0
rRNA (uridine-N3-)-methyltransferase activity
K09761
-
2.1.1.193
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008248
295.0
View
LYD1_k127_47137_1
Nitroreductase family
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001603
284.0
View
LYD1_k127_47137_2
Putative zinc- or iron-chelating domain
-
-
-
0.000000000000000000000000000000000000000000000000000006336
194.0
View
LYD1_k127_47137_3
PFAM PHP domain
-
-
-
0.0000000000000000000000000000000000000000000009033
172.0
View
LYD1_k127_47137_4
Metallo-beta-lactamase superfamily
-
-
-
0.0000000000000000000000000000000000000000132
156.0
View
LYD1_k127_47137_5
-
-
-
-
0.000000000000000000000000000000000000358
145.0
View
LYD1_k127_47137_6
Cupin 2, conserved barrel domain protein
-
-
-
0.0000000000000000000000000009582
115.0
View
LYD1_k127_4740544_0
Carbamoyl-phosphate synthetase large chain, oligomerisation domain
K01955
-
6.3.5.5
0.0
1535.0
View
LYD1_k127_4740544_1
Phosphoglycerate kinase
K00927
-
2.7.2.3
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000086
615.0
View
LYD1_k127_4740544_2
PFAM phosphofructokinase
K00850
-
2.7.1.11
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002815
544.0
View
LYD1_k127_4740544_3
Carbamoyl-phosphate synthase small chain, CPSase domain
K01956
-
6.3.5.5
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002539
505.0
View
LYD1_k127_4740544_4
Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
K01465
-
3.5.2.3
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002112
499.0
View
LYD1_k127_4740544_5
Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
K00609
-
2.1.3.2
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123
389.0
View
LYD1_k127_4740544_6
Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
K02825
-
2.4.2.9
0.000000000000000000000000000000000000000000000000000000000000000000009754
237.0
View
LYD1_k127_4795639_0
Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
K00231
-
1.3.3.15,1.3.3.4
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002499
442.0
View
LYD1_k127_4795639_1
Catalyzes the ferrous insertion into protoporphyrin IX
K01772
GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
4.99.1.1,4.99.1.9
0.0000000000000000000000000000000000000000000000000000000000000000000000000001548
265.0
View
LYD1_k127_4806768_0
Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
K00773
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046116,GO:0046483,GO:0055086,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659
2.4.2.29
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125
507.0
View
LYD1_k127_4806768_1
Exonuclease
K02342
-
2.7.7.7
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002627
283.0
View
LYD1_k127_4806768_2
Protein of unknown function (DUF498/DUF598)
-
-
-
0.0000000000000000000000000000002362
126.0
View
LYD1_k127_4806768_3
PFAM phospholipid glycerol acyltransferase
K00655
-
2.3.1.51
0.00000000000000003984
89.0
View
LYD1_k127_4818220_0
ATPase BadF BadG BcrA BcrD type
-
-
-
0.0
1557.0
View
LYD1_k127_4818220_1
Belongs to the N-Me-Phe pilin family
K02650
-
-
0.000000008375
62.0
View
LYD1_k127_4824805_0
General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
K01006
-
2.7.9.1
0.0
1191.0
View
LYD1_k127_4824805_1
Peptidase family M23
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008042
312.0
View
LYD1_k127_4824805_2
AIR synthase related protein, N-terminal domain
K01933
-
6.3.3.1
0.00000000000000000000000000000000000000000000000000000000000000000000000231
249.0
View
LYD1_k127_4824805_3
Peptidase C26
K07010
-
-
0.0000000000000000000000000000000000005001
148.0
View
LYD1_k127_4824805_4
Polymer-forming cytoskeletal
-
-
-
0.000000000000000000000000007197
113.0
View
LYD1_k127_4824805_5
COG2200 FOG EAL domain
K20963
-
3.1.4.52
0.000000003142
65.0
View
LYD1_k127_4825956_0
Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
K01895
-
6.2.1.1
0.0
1090.0
View
LYD1_k127_4825956_1
PD-(D/E)XK nuclease superfamily
-
-
-
4.625e-244
788.0
View
LYD1_k127_4825956_10
HlyD membrane-fusion protein of T1SS
K03543
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004891
378.0
View
LYD1_k127_4825956_11
ABC transporter
K02003
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001467
312.0
View
LYD1_k127_4825956_12
Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
K01883,K02533,K08281,K15396
-
2.1.1.200,3.5.1.19,6.1.1.16
0.000000000000000000000000000000000000000000000000000000000000000000000000000000007473
276.0
View
LYD1_k127_4825956_13
dUTP biosynthetic process
K01494
GO:0003674,GO:0003824,GO:0006139,GO:0006220,GO:0006244,GO:0006253,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008829,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009166,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009223,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0018130,GO:0019239,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046065,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576
3.5.4.13
0.0000000000000000000000000000000000000000000000000000000000000000000000000003925
258.0
View
LYD1_k127_4825956_14
PFAM Isochorismatase
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000005369
256.0
View
LYD1_k127_4825956_15
transcriptional regulator
-
GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0043565,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1903506,GO:1990837,GO:2000112,GO:2001141
-
0.0000000000000000000000000000000000000000000000000000000000000005532
225.0
View
LYD1_k127_4825956_16
Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
K01591
-
4.1.1.23
0.0000000000000000000000000000000000000000000000000000000000003044
218.0
View
LYD1_k127_4825956_17
Domain in cystathionine beta-synthase and other proteins.
K07182
-
-
0.000000000000000000000000000000000000000000000000000001613
193.0
View
LYD1_k127_4825956_18
DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
K02342
-
2.7.7.7
0.00000000000000000000000000000000001373
144.0
View
LYD1_k127_4825956_19
Protein of unknown function, DUF485
-
-
-
0.0000000000000000000000000002829
117.0
View
LYD1_k127_4825956_2
Belongs to the helicase family. UvrD subfamily
-
-
-
5.238e-228
738.0
View
LYD1_k127_4825956_20
carbon dioxide binding
K04653
-
-
0.00000000000000004121
86.0
View
LYD1_k127_4825956_21
PFAM Tetratricopeptide repeat
-
-
-
0.00000165
57.0
View
LYD1_k127_4825956_3
C-terminal domain of tail specific protease (DUF3340)
K03797
-
3.4.21.102
6.085e-225
719.0
View
LYD1_k127_4825956_4
ABC-type antimicrobial peptide transport system, permease component
K02004
-
-
1.715e-199
627.0
View
LYD1_k127_4825956_5
Sodium:solute symporter family
K14393
-
-
3.844e-196
627.0
View
LYD1_k127_4825956_6
Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
K02005
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253
453.0
View
LYD1_k127_4825956_7
Sugar (and other) transporter
K03446
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009601
443.0
View
LYD1_k127_4825956_8
Anthranilate synthase component I
K01657,K01665,K03342,K13950
-
2.6.1.85,4.1.3.27,4.1.3.38
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003108
451.0
View
LYD1_k127_4825956_9
Outer membrane efflux protein
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009581
401.0
View
LYD1_k127_4827677_0
Sodium/hydrogen exchanger family
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001761
555.0
View
LYD1_k127_4827677_1
AMP binding
-
-
-
0.00000000000000000000000000000000000000000001458
165.0
View
LYD1_k127_4827677_2
acr, cog1993
K09137
-
-
0.000000000000000000003617
102.0
View
LYD1_k127_4836933_0
TIGRFAM alpha-glucan
-
-
-
0.0
1419.0
View
LYD1_k127_4836933_1
Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
K00036
-
1.1.1.363,1.1.1.49
3.015e-232
729.0
View
LYD1_k127_4836933_10
phosphonoacetaldehyde hydrolase activity
K00817,K07025,K20866
-
2.6.1.9,3.1.3.10
0.0000000008363
60.0
View
LYD1_k127_4836933_11
redox protein regulator of disulfide bond formation
K07397
-
-
0.0006317
43.0
View
LYD1_k127_4836933_2
metal-dependent phosphohydrolase HD
-
-
-
2.992e-207
664.0
View
LYD1_k127_4836933_3
type IV pilus assembly PilZ
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207
552.0
View
LYD1_k127_4836933_4
Outer membrane efflux protein
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005851
437.0
View
LYD1_k127_4836933_5
Membrane protein involved in aromatic hydrocarbon degradation
K06076
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003076
431.0
View
LYD1_k127_4836933_6
PFAM Methyltransferase type 11
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009497
289.0
View
LYD1_k127_4836933_7
Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
-
-
-
0.00000000000000000006103
93.0
View
LYD1_k127_4836933_8
helix_turn_helix, Arsenical Resistance Operon Repressor
K03892
-
-
0.0000000000005985
74.0
View
LYD1_k127_4836933_9
Diguanylate cyclase
-
-
-
0.0000000002249
63.0
View
LYD1_k127_4842556_0
Synthesizes alpha-1,4-glucan chains using ADP-glucose
K00703
-
2.4.1.21
4.457e-236
739.0
View
LYD1_k127_4842556_1
Chain length determinant protein
K16554
-
-
7.75e-209
672.0
View
LYD1_k127_4842556_10
Type II secretion system protein B
K02451
-
-
0.000000000000005159
83.0
View
LYD1_k127_4842556_11
Protein of unknown function (DUF2934)
-
-
-
0.00005518
49.0
View
LYD1_k127_4842556_2
Lipid A core-O-antigen ligase-like enyme
K18814
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009189
563.0
View
LYD1_k127_4842556_3
Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
K03086
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002119
412.0
View
LYD1_k127_4842556_4
SMART AAA ATPase
K02450
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003416
390.0
View
LYD1_k127_4842556_5
PBP superfamily domain
K02040
-
-
0.0000000000000000000000000000000000000000000000000000000000003092
221.0
View
LYD1_k127_4842556_6
-
-
-
-
0.000000000000000000000000000000000000000000000000000000004718
204.0
View
LYD1_k127_4842556_7
Bacterial regulatory proteins, crp family
-
-
-
0.00000000000000000000000000000000000000000000000001791
188.0
View
LYD1_k127_4842556_8
phosphatase activity
K05967
-
-
0.000000000000000000000000000000000000000006324
160.0
View
LYD1_k127_4842556_9
Polysaccharide biosynthesis/export protein
K01991
-
-
0.000000000000000000000003503
102.0
View
LYD1_k127_4852785_0
Biotin carboxylase C-terminal domain
K01961
-
6.3.4.14,6.4.1.2
1.031e-209
660.0
View
LYD1_k127_4852785_1
Pyruvate:ferredoxin oxidoreductase core domain II
K00169
-
1.2.7.1
4.292e-196
616.0
View
LYD1_k127_4852785_10
Mur ligase family, catalytic domain
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002906
313.0
View
LYD1_k127_4852785_11
Metallopeptidase family M24
K01262
-
3.4.11.9
0.0000000000000000000000000000000000000000000000000000000000000000000000000000003503
278.0
View
LYD1_k127_4852785_12
Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
K02356
GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576
-
0.000000000000000000000000000000000000000000000000000000000000000000000003366
247.0
View
LYD1_k127_4852785_13
PFAM Roadblock LC7 family protein
-
-
-
0.0000000000000000000000000000000000000000000000000000000000008982
213.0
View
LYD1_k127_4852785_14
Domain of unknown function (DUF1732)
-
-
-
0.000000000000000000000000000000000000000000000000000000000004078
218.0
View
LYD1_k127_4852785_15
Essential for recycling GMP and indirectly, cGMP
K00942
-
2.7.4.8
0.00000000000000000000000000000000000000000000000000000000008953
211.0
View
LYD1_k127_4852785_16
Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
K03469
GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576
3.1.26.4
0.0000000000000000000000000000000000000000000000000000000001016
208.0
View
LYD1_k127_4852785_17
protein phosphatase 2C domain protein
K01090,K20074
-
3.1.3.16
0.0000000000000000000000000000000000000000000000000000000002453
211.0
View
LYD1_k127_4852785_18
DoxX
K15977
-
-
0.0000000000000000000000000000000000000000000000000000002367
197.0
View
LYD1_k127_4852785_19
NADP oxidoreductase coenzyme F420-dependent
K06988
-
1.5.1.40
0.000000000000000000000000000000000000000000000000001588
190.0
View
LYD1_k127_4852785_2
ATPase, P-type (transporting), HAD superfamily, subfamily IC
K01537
-
3.6.3.8
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002193
555.0
View
LYD1_k127_4852785_20
oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor
K00171,K00172
-
1.2.7.1
0.00000000000000000000000000000000000000000000001373
171.0
View
LYD1_k127_4852785_21
first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
K02160
-
-
0.00000000000000000000000000000000000000000000001469
174.0
View
LYD1_k127_4852785_22
Catalyzes a trans-dehydration via an enolate intermediate
K03786
-
4.2.1.10
0.00000000000000000000000000000000000000000000003767
173.0
View
LYD1_k127_4852785_23
Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
K00788
GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
2.5.1.3
0.000000000000000000000000000000000000000000000769
172.0
View
LYD1_k127_4852785_24
PemK-like, MazF-like toxin of type II toxin-antitoxin system
K07171
-
-
0.00000000000000000000000000000000000000008119
152.0
View
LYD1_k127_4852785_25
nucleotide metabolic process
-
-
-
0.000000000000000000000000000000000000002268
155.0
View
LYD1_k127_4852785_26
-
-
-
-
0.0000000000000000000000000000008914
125.0
View
LYD1_k127_4852785_27
FHA Domain
-
-
-
0.000000000000000000000000000001999
128.0
View
LYD1_k127_4852785_28
Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
K03060
-
2.7.7.6
0.000000000000000000000000000002555
124.0
View
LYD1_k127_4852785_29
Belongs to the UPF0296 family
K09777
-
-
0.00000000000000000000000002723
111.0
View
LYD1_k127_4852785_3
oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor
K00170
-
1.2.7.1
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001602
497.0
View
LYD1_k127_4852785_30
Cold shock
K03704
-
-
0.00000000000000000000000003491
108.0
View
LYD1_k127_4852785_31
Transcriptional regulator
-
-
-
0.00000000000000000000002532
103.0
View
LYD1_k127_4852785_32
Ribbon-helix-helix protein, copG family
-
-
-
0.00000000000000000000839
93.0
View
LYD1_k127_4852785_33
-
-
-
-
0.00000000000000000004538
95.0
View
LYD1_k127_4852785_34
Roadblock/LC7 domain
-
-
-
0.0000000000000000002808
92.0
View
LYD1_k127_4852785_35
belongs to the thioredoxin family
K14949,K20543
-
2.7.11.1
0.0000000000000000007038
98.0
View
LYD1_k127_4852785_36
Transposase
-
-
-
0.000000000000000001677
87.0
View
LYD1_k127_4852785_37
Cytochrome c
-
-
-
0.0000000000000001079
83.0
View
LYD1_k127_4852785_4
C oxidoreductase subunit A
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141
422.0
View
LYD1_k127_4852785_5
PFAM peptidase
K08303
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374
409.0
View
LYD1_k127_4852785_6
Receptor family ligand binding region
K01999
GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006865,GO:0008150,GO:0015711,GO:0015803,GO:0015804,GO:0015818,GO:0015820,GO:0015829,GO:0015849,GO:0016597,GO:0030288,GO:0030313,GO:0031406,GO:0031975,GO:0036094,GO:0042597,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0044464,GO:0046942,GO:0051179,GO:0051234,GO:0070728,GO:0071702,GO:0071705
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000235
399.0
View
LYD1_k127_4852785_7
Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
K13038
-
4.1.1.36,6.3.2.5
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002815
387.0
View
LYD1_k127_4852785_8
ADP-ribosylation factor family
K06883
GO:0008150,GO:0032879,GO:0032880,GO:0050789,GO:0065007
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008929
336.0
View
LYD1_k127_4852785_9
Pyruvate ferredoxin/flavodoxin oxidoreductase
K00172
-
1.2.7.1
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000461
312.0
View
LYD1_k127_4855809_0
Domains REC, sigma54 interaction, HTH8
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002975
393.0
View
LYD1_k127_4855809_1
GAF domain
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003
300.0
View
LYD1_k127_4855809_2
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
K14986
-
2.7.13.3
0.0000000000000000000000000000000000000000000000000000000000000000000000007336
263.0
View
LYD1_k127_4855809_3
Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
K03215
-
2.1.1.190
0.00000000000000000000000000000000000000000000000000000000000000000003435
249.0
View
LYD1_k127_4855809_4
phosphorelay signal transduction system
-
-
-
0.0000000000000000000000000000000000000000000002079
169.0
View
LYD1_k127_4855809_5
radical SAM domain protein
-
-
-
0.00000000000000000000000000000000997
139.0
View
LYD1_k127_4855809_6
PFAM Disulphide bond isomerase, DsbC G-like
K03981
-
5.3.4.1
0.0000000000005972
79.0
View
LYD1_k127_4855809_7
peptidyl-prolyl cis-trans isomerase activity
K03769,K03771
-
5.2.1.8
0.0000000006386
69.0
View
LYD1_k127_4855809_8
cellulose binding
-
-
-
0.0000113
60.0
View
LYD1_k127_4855809_9
Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
K03769,K07533
-
5.2.1.8
0.00002951
55.0
View
LYD1_k127_4858154_0
PFAM S-adenosylmethionine synthetase (MAT)
K00789
-
2.5.1.6
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003878
574.0
View
LYD1_k127_4858154_1
Nitronate monooxygenase
K00459
-
1.13.12.16
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005374
543.0
View
LYD1_k127_4858154_10
Thiamine-binding protein
-
-
-
0.000000000000000000000000000000000322
134.0
View
LYD1_k127_4858154_11
two component, sigma54 specific, transcriptional regulator, Fis family
K07712
-
-
0.000000000000000000000000000003298
126.0
View
LYD1_k127_4858154_12
JAB/MPN domain
K21140
-
3.13.1.6
0.0000000000000000000000002472
109.0
View
LYD1_k127_4858154_13
FtsX-like permease family
K02004
-
-
0.000000000000000000006974
96.0
View
LYD1_k127_4858154_14
Belongs to the sulfur carrier protein TusA family
-
-
-
0.000000000000000002559
87.0
View
LYD1_k127_4858154_15
Tetratricopeptide repeat
K07452
-
-
0.000000004842
66.0
View
LYD1_k127_4858154_2
Peptidase family M48
K03799
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002771
386.0
View
LYD1_k127_4858154_3
ThiF family
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008287
376.0
View
LYD1_k127_4858154_4
Histidine kinase
K02482
-
2.7.13.3
0.000000000000000000000000000000000000000000000000000000000000000000000000000000001474
293.0
View
LYD1_k127_4858154_5
ATPase activity
K01990
-
-
0.000000000000000000000000000000000000000000000000000000000000000001016
235.0
View
LYD1_k127_4858154_6
Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
K00564,K15460
-
2.1.1.172,2.1.1.223
0.000000000000000000000000000000000000000000000000000000000000000004753
233.0
View
LYD1_k127_4858154_7
Putative ATP-binding cassette
K01992
-
-
0.000000000000000000000000000000000000000000000000000000004542
219.0
View
LYD1_k127_4858154_8
HAD-hyrolase-like
K01091
-
3.1.3.18
0.00000000000000000000000000000000000000000000000000001276
197.0
View
LYD1_k127_4858154_9
Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides
K02003
-
-
0.0000000000000000000000000000000000000000000000000006436
192.0
View
LYD1_k127_4858845_0
response regulator
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003598
497.0
View
LYD1_k127_4858845_1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
K14986
-
2.7.13.3
0.00000000000000000000000000000000000000000000000000000002541
207.0
View
LYD1_k127_4858845_2
Response regulator receiver domain
-
-
-
0.0002737
51.0
View
LYD1_k127_4886779_0
domain, Protein
K01186
-
3.2.1.18
0.00000000000000000000000005905
124.0
View
LYD1_k127_4886779_1
peptidyl-prolyl cis-trans isomerase activity
K03769,K03771
-
5.2.1.8
0.00000000006993
72.0
View
LYD1_k127_4886779_2
Hep Hag repeat protein
K21449
-
-
0.0001248
55.0
View
LYD1_k127_4893012_0
GTP-binding protein TypA
K06207
-
-
1.564e-263
823.0
View
LYD1_k127_4893012_1
Amidohydrolase family
-
-
-
0.00000000000000000000000004342
115.0
View
LYD1_k127_4900987_0
Aconitase C-terminal domain
K01681
-
4.2.1.3
1.557e-277
863.0
View
LYD1_k127_4900987_1
-
-
-
-
0.000000000000004282
81.0
View
LYD1_k127_4900987_4
Belongs to the 'phage' integrase family
-
-
-
0.0003277
47.0
View
LYD1_k127_4900987_5
-
-
-
-
0.0005558
48.0
View
LYD1_k127_4917584_0
Polysulphide reductase, NrfD
-
-
-
1.973e-195
616.0
View
LYD1_k127_4917584_1
PFAM Phosphotransferase enzyme family
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246
509.0
View
LYD1_k127_4917584_2
4Fe-4S dicluster domain
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008601
436.0
View
LYD1_k127_4917584_3
HMGL-like
K01666
-
4.1.3.39
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001756
397.0
View
LYD1_k127_4917584_4
Response regulator, receiver
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005596
317.0
View
LYD1_k127_4917584_5
Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
K00384
-
1.8.1.9
0.000000000000000000000000000000000000000000000000000000000000000000000000000001236
267.0
View
LYD1_k127_4917584_6
Menaquinol oxidoreductase complex Cbc4, cytochrome c subunit
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000007308
233.0
View
LYD1_k127_4917584_7
-
-
-
-
0.000000000000000000000000000000000000000000000000000000005565
203.0
View
LYD1_k127_4917584_8
KDPG and KHG aldolase
K01625
-
4.1.2.14,4.1.3.42
0.00000000000000000000000000000000000000002743
160.0
View
LYD1_k127_4917584_9
Domain of unknown function DUF302
-
-
-
0.0000000000000000000000000005489
125.0
View
LYD1_k127_4937884_0
Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
K01937
-
6.3.4.2
2.706e-244
765.0
View
LYD1_k127_4937884_1
Belongs to the SIS family. GutQ KpsF subfamily
K06041
-
5.3.1.13
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002255
420.0
View
LYD1_k127_4937884_2
3-deoxy-D-manno-octulosonic acid 8-phosphate synthase
K01627
-
2.5.1.55
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005695
370.0
View
LYD1_k127_4937884_3
Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
K00979
-
2.7.7.38
0.0000000000000000000000000000000000000000000000000000006536
199.0
View
LYD1_k127_4938044_0
Putative RNA methylase family UPF0020
K07444,K12297
-
2.1.1.173,2.1.1.264
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001578
459.0
View
LYD1_k127_4938044_1
FKBP-type peptidyl-prolyl cis-trans isomerase
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003709
302.0
View
LYD1_k127_4938044_2
Histidine kinase
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000913
301.0
View
LYD1_k127_4938044_3
Histidine kinase
K14986
-
2.7.13.3
0.0000000000000000000000000000000000000000000000000000000000000000000000000000001159
287.0
View
LYD1_k127_4938044_4
helix_turn_helix, Lux Regulon
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000004242
246.0
View
LYD1_k127_4938044_5
-
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000009871
235.0
View
LYD1_k127_4938044_6
denitrification pathway
-
-
-
0.000000000000000000000000000000000000000000000000000000000000821
216.0
View
LYD1_k127_4938044_7
Oligopeptidase F
K08602
-
-
0.00000000000000000000003983
110.0
View
LYD1_k127_4944058_0
Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology
-
-
-
3.651e-203
637.0
View
LYD1_k127_4944058_1
fatty acid beta-oxidation using acyl-CoA dehydrogenase
K03522,K22432
GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006091,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009055,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016491,GO:0019395,GO:0019752,GO:0022900,GO:0030258,GO:0032787,GO:0033539,GO:0034440,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071704,GO:0072329,GO:0097159,GO:1901265,GO:1901363,GO:1901575
1.3.1.108
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058
495.0
View
LYD1_k127_4944058_2
Alcohol dehydrogenase GroES-like domain
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295
414.0
View
LYD1_k127_4944058_3
DeoC/LacD family aldolase
K08321
-
2.3.1.245
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000173
355.0
View
LYD1_k127_4944058_4
Peptidase U62 modulator of DNA gyrase
K03592
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001537
343.0
View
LYD1_k127_4944058_5
malonyl CoA-acyl carrier protein transacylase
K00645
-
2.3.1.39
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101
329.0
View
LYD1_k127_4944058_6
PFAM Electron transfer flavoprotein
K03521
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003936
313.0
View
LYD1_k127_4944058_7
Phosphoribosyl transferase domain
K00760
-
2.4.2.8
0.000000000000000000000000000000000000000000000000000000000000000002603
229.0
View
LYD1_k127_4944058_8
6-pyruvoyl tetrahydropterin synthase
K01737
-
4.1.2.50,4.2.3.12
0.000000000000000000000000000000000000000000005372
166.0
View
LYD1_k127_4944058_9
-
K06039,K07092
-
-
0.00001818
50.0
View
LYD1_k127_4948738_0
radical SAM domain protein
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003876
338.0
View
LYD1_k127_4948738_1
Uncharacterized protein conserved in bacteria (DUF2155)
-
-
-
0.000000000000000000000000000025
124.0
View
LYD1_k127_4948738_3
PFAM Rubrerythrin
-
-
-
0.000000000002635
73.0
View
LYD1_k127_4956425_0
isocitrate dehydrogenase activity
K00031
GO:0000287,GO:0003674,GO:0003824,GO:0004448,GO:0004450,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0006081,GO:0006082,GO:0006091,GO:0006097,GO:0006099,GO:0006101,GO:0006102,GO:0008150,GO:0008152,GO:0008270,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016614,GO:0016616,GO:0016999,GO:0017144,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044464,GO:0045333,GO:0046487,GO:0046872,GO:0046914,GO:0055114,GO:0071704,GO:0071944,GO:0072350
1.1.1.42
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008729
573.0
View
LYD1_k127_4956425_1
Bacterial transcriptional activator domain
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003076
306.0
View
LYD1_k127_4956425_2
HD domain
K07023
-
-
0.000000000000000000000000000000000000000000000000000000000000000000001118
239.0
View
LYD1_k127_4956425_3
Hep Hag repeat protein
-
-
-
0.00000000000000000000001462
116.0
View
LYD1_k127_4956754_0
Iron-sulfur cluster-binding domain
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008027
416.0
View
LYD1_k127_4956754_1
PFAM Rhodanese domain protein
-
-
-
0.00000000000000000000000000000000000000000000000000009263
196.0
View
LYD1_k127_4956754_2
Acetyltransferase (GNAT) domain
-
-
-
0.00000000000000000000000000588
119.0
View
LYD1_k127_4956754_3
PFAM thiamineS protein
-
-
-
0.00000000000007439
73.0
View
LYD1_k127_4969541_0
Respiratory-chain NADH dehydrogenase domain 51 kDa subunit
K00124,K00335,K00355,K18331
-
1.12.1.3,1.6.5.2,1.6.5.3
4.445e-273
852.0
View
LYD1_k127_4969541_1
Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
K04077
GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220
-
2.688e-271
842.0
View
LYD1_k127_4969541_10
-
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000001311
276.0
View
LYD1_k127_4969541_11
(Rhomboid) family
K07059
-
-
0.00000000000000000000000000000000000000000000000000000000000000000003583
238.0
View
LYD1_k127_4969541_12
PHP-associated
K07053
-
3.1.3.97
0.00000000000000000000000000000000000000000000000000000000000001066
224.0
View
LYD1_k127_4969541_13
SCO1 SenC
K07152
-
-
0.00000000000000000000000000000000000000000000000000000000001189
212.0
View
LYD1_k127_4969541_14
OsmC-like protein
K04063
-
-
0.00000000000000000000000000000000000000000000000001608
184.0
View
LYD1_k127_4969541_15
SMART ATP-binding region ATPase domain protein
-
-
-
0.0000000000000000000000000000000000000000000000003313
181.0
View
LYD1_k127_4969541_16
zinc-ribbon domain
-
-
-
0.00000000000000000000000000000000000000000001472
180.0
View
LYD1_k127_4969541_17
PFAM ATP-binding region, ATPase domain protein
-
-
-
0.0000000000000000000000000000000000000004356
158.0
View
LYD1_k127_4969541_18
Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
K04078
GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077
-
0.0000000000000000000000000000000005274
133.0
View
LYD1_k127_4969541_19
response to copper ion
K07156,K14166
-
-
0.000000000000000000000000000000001619
133.0
View
LYD1_k127_4969541_2
NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
K00336
-
1.6.5.3
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001918
576.0
View
LYD1_k127_4969541_20
NosL
-
-
-
0.00000000000000000000000000000003782
143.0
View
LYD1_k127_4969541_21
DRTGG domain
-
-
-
0.00000000000000000000000000000235
124.0
View
LYD1_k127_4969541_22
DRTGG domain protein
-
-
-
0.00000000000000000000000001631
112.0
View
LYD1_k127_4969541_23
Universal stress protein family
-
-
-
0.00000000000001962
84.0
View
LYD1_k127_4969541_3
2Fe-2S iron-sulfur cluster binding domain
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007593
556.0
View
LYD1_k127_4969541_4
Cytochrome c
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173
531.0
View
LYD1_k127_4969541_5
Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
K03526
GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576
1.17.7.1,1.17.7.3
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257
472.0
View
LYD1_k127_4969541_6
long-chain fatty acid transport protein
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000656
402.0
View
LYD1_k127_4969541_7
Putative redox-active protein (C_GCAxxG_C_C)
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003295
349.0
View
LYD1_k127_4969541_8
Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
K01918
GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605
6.3.2.1
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001698
331.0
View
LYD1_k127_4969541_9
Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
K07082
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004286
325.0
View
LYD1_k127_4993767_0
Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
K01912
-
6.2.1.30
2.109e-212
666.0
View
LYD1_k127_4993767_1
Receptor family ligand binding region
K01999
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003966
348.0
View
LYD1_k127_4993767_2
PFAM amino acid-binding ACT domain protein
-
-
-
0.000000000000000000000000000000000000000000000000000000000008471
209.0
View
LYD1_k127_5001323_0
Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
K02112
-
3.6.3.14
2.853e-254
789.0
View
LYD1_k127_5001323_1
Belongs to the AlaDH PNT family
K00259
-
1.4.1.1
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101
470.0
View
LYD1_k127_5001323_10
PFAM Amidohydrolase 2
-
-
-
0.000000000000000000000000000000000004565
150.0
View
LYD1_k127_5001323_11
Produces ATP from ADP in the presence of a proton gradient across the membrane
K02114
GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600
-
0.000000000000000000000000000000001083
134.0
View
LYD1_k127_5001323_12
Protein required for attachment to host cells
-
-
-
0.000000000000000000000000006335
117.0
View
LYD1_k127_5001323_13
Autoinducer binding domain
K20334
-
-
0.000000000000000615
80.0
View
LYD1_k127_5001323_2
TonB dependent receptor
K16092
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004759
481.0
View
LYD1_k127_5001323_3
response regulator receiver
K02481,K07712
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005672
393.0
View
LYD1_k127_5001323_4
radical SAM
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318
383.0
View
LYD1_k127_5001323_5
Domains HAMP, HisKA, HATPase_c, REC
K02030
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003208
383.0
View
LYD1_k127_5001323_6
Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
K02115
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001926
314.0
View
LYD1_k127_5001323_7
Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
K03798
GO:0003674,GO:0003824,GO:0004176,GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009057,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0030163,GO:0042623,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575
-
0.00000000000000000000000000000000000000000000000000000000000000001213
230.0
View
LYD1_k127_5001323_8
Protein of unknown function (DUF3108)
-
-
-
0.000000000000000000000000000000000000000000000000000000009535
212.0
View
LYD1_k127_5001323_9
ABC transporter substrate binding protein
K01989
-
-
0.000000000000000000000000000000000000000000000000000000438
204.0
View
LYD1_k127_5008134_0
Pyruvate phosphate dikinase, PEP/pyruvate binding domain
K01007
-
2.7.9.2
1.736e-290
925.0
View
LYD1_k127_5008134_1
AMP binding
-
-
-
0.000000000000000000000000000000000000000000001374
173.0
View
LYD1_k127_5008134_2
YceI-like domain
-
-
-
0.0000000000000000000000000000000000000003521
156.0
View
LYD1_k127_5008134_3
Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
K04078
GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0042802,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077
-
0.0000000000000000000000000000000000000003646
151.0
View
LYD1_k127_5008134_4
PFAM nitrogen-fixing NifU domain protein
-
-
-
0.00000000000000000000002622
102.0
View
LYD1_k127_5008134_6
TIGRFAM alkylhydroperoxidase like protein, AhpD family
-
-
-
0.000000000000004737
81.0
View
LYD1_k127_5011607_0
PFAM magnesium chelatase ChlI subunit
K07391
-
-
6.879e-208
659.0
View
LYD1_k127_5011607_1
Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
K00616
-
2.2.1.2
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007614
315.0
View
LYD1_k127_5011607_3
Regulatory protein, FmdB family
-
-
-
0.000000000000000002533
86.0
View
LYD1_k127_5015339_0
PFAM NADH flavin oxidoreductase NADH oxidase
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001527
559.0
View
LYD1_k127_5015339_1
PFAM HPP family
K07168
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000004317
263.0
View
LYD1_k127_5015339_2
Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
K02493
GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464
2.1.1.297
0.00000000000000000000000000000000000000000000000000000000000000002601
234.0
View
LYD1_k127_5015339_3
PFAM CBS domain
-
-
-
0.000000000000000000000000000000000000000000000000000002168
197.0
View
LYD1_k127_5015339_4
Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
K02835
-
-
0.00003259
46.0
View
LYD1_k127_5015339_5
PFAM Uncharacterised protein family UPF0150
-
-
-
0.0002689
46.0
View
LYD1_k127_5023783_0
PFAM natural resistance-associated macrophage protein
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004538
529.0
View
LYD1_k127_5023783_1
Belongs to the dGTPase family. Type 2 subfamily
K01129
GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008832,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009151,GO:0009155,GO:0009166,GO:0009200,GO:0009204,GO:0009215,GO:0009217,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016787,GO:0016788,GO:0016793,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042578,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046070,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576
3.1.5.1
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007324
449.0
View
LYD1_k127_5023783_10
Methylase involved in ubiquinone menaquinone biosynthesis
-
-
-
0.00000000000000000000000000000000000000000000000000000000000002205
219.0
View
LYD1_k127_5023783_11
ferrous iron binding
K06990,K09141
-
-
0.000000000000000000000000000000000000000000000000000000000003367
216.0
View
LYD1_k127_5023783_12
-
-
-
-
0.0000000000000000000000000000000000000000000000000000006908
202.0
View
LYD1_k127_5023783_13
PFAM Uncharacterised protein family UPF0047
-
-
-
0.000000000000000000000000000000000000000000000001231
177.0
View
LYD1_k127_5023783_14
-
-
-
-
0.0000000000000000000000000001168
120.0
View
LYD1_k127_5023783_15
heat shock protein binding
K03686
-
-
0.0000000001991
73.0
View
LYD1_k127_5023783_2
Belongs to the DegT DnrJ EryC1 family
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002666
445.0
View
LYD1_k127_5023783_3
Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
K08963
GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0019509,GO:0019752,GO:0043094,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046523,GO:0071265,GO:0071267,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
5.3.1.23
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101
402.0
View
LYD1_k127_5023783_4
MgtE intracellular N domain
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003765
385.0
View
LYD1_k127_5023783_5
3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
K02527
-
2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002385
346.0
View
LYD1_k127_5023783_6
Polyprenyl synthetase
K02523
-
2.5.1.90
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159
342.0
View
LYD1_k127_5023783_7
Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
K00748
GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509
2.4.1.182
0.0000000000000000000000000000000000000000000000000000000000000000000000000000007222
276.0
View
LYD1_k127_5023783_8
Oxidoreductase family, NAD-binding Rossmann fold
K09949
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000001267
273.0
View
LYD1_k127_5023783_9
Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA)
K00912
-
2.7.1.130
0.000000000000000000000000000000000000000000000000000000000000006768
228.0
View
LYD1_k127_5038450_0
Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
K00615
-
2.2.1.1
2.141e-275
861.0
View
LYD1_k127_5038450_1
Transglycosylase
K05365,K05366
-
2.4.1.129,3.4.16.4
5.291e-241
760.0
View
LYD1_k127_5038450_10
nickel cation binding
K04651,K19640
-
-
0.0000000000000000000000000000001784
127.0
View
LYD1_k127_5038450_11
Stringent starvation protein B
K09985
-
-
0.00000000000000000000000000001582
123.0
View
LYD1_k127_5038450_12
YtxH-like protein
-
-
-
0.0000000000000000000000001584
109.0
View
LYD1_k127_5038450_13
peptidyl-tyrosine sulfation
-
-
-
0.00000000004993
72.0
View
LYD1_k127_5038450_14
Belongs to the Nudix hydrolase family
K03574
-
3.6.1.55
0.00000000008532
63.0
View
LYD1_k127_5038450_16
Aspartyl protease
K06985
-
-
0.00000002301
61.0
View
LYD1_k127_5038450_17
-
-
-
-
0.00009946
53.0
View
LYD1_k127_5038450_2
Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
K02433
-
6.3.5.6,6.3.5.7
3.944e-223
700.0
View
LYD1_k127_5038450_3
Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
K02434
GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564
6.3.5.6,6.3.5.7
1.862e-199
631.0
View
LYD1_k127_5038450_4
Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
K11752
-
1.1.1.193,3.5.4.26
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008494
433.0
View
LYD1_k127_5038450_5
SAICAR synthetase
K01923
GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
6.3.2.6
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003853
424.0
View
LYD1_k127_5038450_6
Belongs to the bacterial glucokinase family
K00845
-
2.7.1.2
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002563
303.0
View
LYD1_k127_5038450_7
COG1194 A G-specific DNA glycosylase
K03575
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000154
291.0
View
LYD1_k127_5038450_8
CobW/HypB/UreG, nucleotide-binding domain
K04652
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004897
279.0
View
LYD1_k127_5038450_9
PFAM Pyruvate kinase, alpha beta domain
K09126
-
-
0.00000000000000000000000000000000000000000000000000004001
193.0
View
LYD1_k127_5059746_0
membrane
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008012
368.0
View
LYD1_k127_5059746_1
Belongs to the ABC transporter superfamily
K02031,K15583
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002478
356.0
View
LYD1_k127_5059746_10
Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
K02528
-
2.1.1.182
0.00000000000000000000000000000000000000000000000000000000000000000000000002319
258.0
View
LYD1_k127_5059746_11
MlaD protein
K02067
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000003101
250.0
View
LYD1_k127_5059746_12
cytochrome complex assembly
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000003372
231.0
View
LYD1_k127_5059746_13
Metal-dependent phosphohydrolase
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000007417
229.0
View
LYD1_k127_5059746_14
MotA/TolQ/ExbB proton channel family
K03562
-
-
0.000000000000000000000000000000000000000000000000000001108
198.0
View
LYD1_k127_5059746_15
Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP)
K03637
-
4.6.1.17
0.000000000000000000000000000000000000000000000000000002457
197.0
View
LYD1_k127_5059746_16
cytochrome c biogenesis protein
-
-
-
0.00000000000000000000000000000000000000000000000002283
187.0
View
LYD1_k127_5059746_17
COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain
-
-
-
0.0000000000000000000000000000000000000000000000001675
194.0
View
LYD1_k127_5059746_18
Tetratricopeptide repeat
-
-
-
0.00000000000000000000000000000000000000000001153
170.0
View
LYD1_k127_5059746_19
Biopolymer transport protein ExbD/TolR
K03560
-
-
0.00000000000000000000000000000000000001896
153.0
View
LYD1_k127_5059746_2
Pyridoxal phosphate biosynthetic protein PdxA
K00097,K22024
-
1.1.1.262,1.1.1.408,1.1.1.409
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005674
347.0
View
LYD1_k127_5059746_20
Belongs to the ompA family
K03640
-
-
0.000000000000000000000000000000000001895
145.0
View
LYD1_k127_5059746_21
Outer membrane lipoprotein
-
-
-
0.000000000000000000000000000000000004449
149.0
View
LYD1_k127_5059746_22
4Fe-4S binding domain
-
-
-
0.0000000000000000000000000000000000231
136.0
View
LYD1_k127_5059746_23
-
-
-
-
0.0000000000000000000000007718
106.0
View
LYD1_k127_5059746_24
toxin-antitoxin pair type II binding
-
-
-
0.000000000000000000001226
97.0
View
LYD1_k127_5059746_25
energy transducer activity
K03646,K03832
-
-
0.0000000000003204
78.0
View
LYD1_k127_5059746_26
Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system
-
-
-
0.000000000001182
70.0
View
LYD1_k127_5059746_28
PEP-CTERM motif
-
-
-
0.000003109
56.0
View
LYD1_k127_5059746_3
Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
K03639
-
4.1.99.22
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000793
350.0
View
LYD1_k127_5059746_4
Cytochrome c554 and c-prime
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001989
341.0
View
LYD1_k127_5059746_5
Belongs to the ABC transporter superfamily
K02032,K10823
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003789
342.0
View
LYD1_k127_5059746_6
Permease MlaE
K02066
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002492
327.0
View
LYD1_k127_5059746_7
ABC transporter
K02065
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002037
298.0
View
LYD1_k127_5059746_8
CO dehydrogenase acetyl-CoA synthase delta subunit
K00197
-
2.1.1.245
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008294
294.0
View
LYD1_k127_5059746_9
Involved in the TonB-independent uptake of proteins
K03641
GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000004261
271.0
View
LYD1_k127_5090074_0
Transglycosylase
K05365,K05366
-
2.4.1.129,3.4.16.4
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001968
344.0
View
LYD1_k127_5090074_1
NmrA-like family
K00329,K00356
-
1.6.5.3,1.6.99.3
0.00000000000000000000000001533
113.0
View
LYD1_k127_5120779_0
Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
K00975
-
2.7.7.27
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000785
548.0
View
LYD1_k127_5120779_1
Signal transducing histidine kinase homodimeric
K03407
-
2.7.13.3
0.00000000000000000000000000000000000000000000000000000000000000000000000000002246
273.0
View
LYD1_k127_5120779_2
PFAM response regulator receiver
K03413
-
-
0.000000000000000000000000000000000000003253
149.0
View
LYD1_k127_5120779_3
regulator, PATAN and FRGAF domain-containing
-
-
-
0.000000000000000000000000000000000001219
153.0
View
LYD1_k127_5120779_4
Belongs to the N(4) N(6)-methyltransferase family
-
-
-
0.00000000002967
66.0
View
LYD1_k127_5120779_5
-
-
-
-
0.000000000628
66.0
View
LYD1_k127_5130124_0
Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
K03431
GO:0003674,GO:0003824,GO:0004614,GO:0004615,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006040,GO:0006047,GO:0006048,GO:0006139,GO:0006464,GO:0006468,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008966,GO:0009058,GO:0009225,GO:0009226,GO:0009987,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0018130,GO:0019438,GO:0019538,GO:0034641,GO:0034654,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046349,GO:0046483,GO:0046777,GO:0055086,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901576
5.4.2.10
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123
529.0
View
LYD1_k127_5130124_1
Competence protein
K02238
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005103
405.0
View
LYD1_k127_5130124_2
Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
K18672
-
2.7.7.85
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005808
323.0
View
LYD1_k127_5130124_3
acetyltransferases and hydrolases with the alpha beta hydrolase fold
-
-
-
0.00002803
55.0
View
LYD1_k127_5130124_4
YbbR-like protein
-
-
-
0.00005225
54.0
View
LYD1_k127_5136765_0
amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
K01873
GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576
6.1.1.9
0.0
1095.0
View
LYD1_k127_5136765_1
TPM domain
K06872
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000212
391.0
View
LYD1_k127_5136765_2
Belongs to the NadC ModD family
K00767
-
2.4.2.19
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004644
298.0
View
LYD1_k127_5136765_3
response regulator, receiver
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000003094
259.0
View
LYD1_k127_5136765_4
TPM domain
-
-
-
0.00000000000000000000000000000000000000000000000001389
186.0
View
LYD1_k127_5136765_5
Uncharacterized conserved protein (DUF2277)
-
-
-
0.000000000000000000000000000000000004668
138.0
View
LYD1_k127_5136765_7
cheY-homologous receiver domain
-
-
-
0.000778
46.0
View
LYD1_k127_5144774_0
L,D-transpeptidase catalytic domain
K21470
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173
433.0
View
LYD1_k127_5144774_1
PFAM AMP-dependent synthetase and ligase
K01897
-
6.2.1.3
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002975
345.0
View
LYD1_k127_5144774_2
Bacterial protein of unknown function (DUF882)
-
-
-
0.000000000000000000000000000000000000000000000000000005557
195.0
View
LYD1_k127_5144774_3
PIN domain
-
-
-
0.000000000000000000000000000000002421
133.0
View
LYD1_k127_5144774_4
-
K21495
-
-
0.0000000001746
64.0
View
LYD1_k127_5144774_5
-
-
-
-
0.000004013
57.0
View
LYD1_k127_5144833_0
Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
K03517
GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008987,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016053,GO:0017144,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0019805,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046496,GO:0046874,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605
2.5.1.72
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002864
365.0
View
LYD1_k127_5144833_1
Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
K11991
-
3.5.4.33
0.00000000000000000000000000000000000000000000000000004444
194.0
View
LYD1_k127_5144833_2
Archaeal transcriptional regulator TrmB
-
-
-
0.0000000000000000000000000000000000000000123
163.0
View
LYD1_k127_5144833_3
Transglycosylase SLT domain
-
-
-
0.000000000000000000000000000000000000006448
154.0
View
LYD1_k127_5144833_4
Glycosyltransferase family 9 (heptosyltransferase)
-
-
-
0.000000000000000000000000000000000002644
151.0
View
LYD1_k127_5144833_5
Resolvase
-
-
-
0.00000006864
53.0
View
LYD1_k127_5144833_7
-
-
-
-
0.0000005263
51.0
View
LYD1_k127_5153546_0
thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence
K02945
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504
603.0
View
LYD1_k127_5153546_1
NeuB family
K03856
-
2.5.1.54
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035
503.0
View
LYD1_k127_5153546_10
bacterial (prokaryotic) histone like domain
K05788
-
-
0.00000000000000000000000001732
111.0
View
LYD1_k127_5153546_2
Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
K00800
-
2.5.1.19
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001943
440.0
View
LYD1_k127_5153546_3
Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
K00817
-
2.6.1.9
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009175
432.0
View
LYD1_k127_5153546_4
Chorismate mutase type II
K14170
-
4.2.1.51,5.4.99.5
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001677
382.0
View
LYD1_k127_5153546_5
Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
K03527
-
1.17.7.4
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003074
321.0
View
LYD1_k127_5153546_6
Peptidase family S49
K04773
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005245
318.0
View
LYD1_k127_5153546_7
Prephenate dehydrogenase
K04517
-
1.3.1.12
0.00000000000000000000000000000000000000000000000000000000000000000000000000001769
268.0
View
LYD1_k127_5153546_8
Belongs to the cytidylate kinase family. Type 1 subfamily
K00945
GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605
2.7.4.25
0.0000000000000000000000000000000000000000000000002651
185.0
View
LYD1_k127_5153546_9
L,D-transpeptidase catalytic domain
-
-
-
0.000000000000000000000000000000000000000003974
154.0
View
LYD1_k127_5173590_0
Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates
K00179
-
1.2.7.8
4.458e-269
840.0
View
LYD1_k127_5173590_1
Exonuclease of the beta-lactamase fold involved in RNA processing
K07576
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001731
492.0
View
LYD1_k127_5173590_2
Alginate export
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001817
414.0
View
LYD1_k127_5173590_3
Amidohydrolase
K07045
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000207
318.0
View
LYD1_k127_5173590_4
Pyruvate ferredoxin/flavodoxin oxidoreductase
K00180
-
1.2.7.8
0.00000000000000000000000000000000000000000000000000000000000000000007536
236.0
View
LYD1_k127_5173590_5
Peptidase family M23
-
-
-
0.00000000000000000000000000000000002814
137.0
View
LYD1_k127_5173590_6
nucleotidyltransferase activity
-
-
-
0.0000000000000002271
83.0
View
LYD1_k127_5173590_7
Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
K01912
-
6.2.1.30
0.00000004085
55.0
View
LYD1_k127_51958_0
4Fe-4S binding domain
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003352
489.0
View
LYD1_k127_51958_1
CGGC
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000003954
222.0
View
LYD1_k127_51958_2
peptidase U32
-
-
-
0.00000000000000000000000000000000000000000000000000000000001162
209.0
View
LYD1_k127_51958_3
Protein of unknown function (DUF2867)
-
-
-
0.00000000000000000000000000000000000000000000000000000002603
205.0
View
LYD1_k127_51958_4
helix_turn_helix multiple antibiotic resistance protein
-
-
-
0.000000000000000000000000000000003035
134.0
View
LYD1_k127_51958_5
Protein of unknown function (DUF2892)
-
-
-
0.0000000000704
65.0
View
LYD1_k127_51958_6
peroxiredoxin activity
K01607
-
4.1.1.44
0.000000006388
61.0
View
LYD1_k127_52333_0
Glucodextranase, domain N
K01178
-
3.2.1.3
0.0
1110.0
View
LYD1_k127_52333_1
PFAM Alcohol dehydrogenase zinc-binding domain protein
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000189
489.0
View
LYD1_k127_52333_2
DJ-1/PfpI family
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004263
338.0
View
LYD1_k127_52333_3
Transglycosylase
K05365,K05366
-
2.4.1.129,3.4.16.4
0.000000000000000000000000000000000000000000000000000007145
196.0
View
LYD1_k127_52333_4
Belongs to the glycosyl hydrolase 57 family
-
-
-
0.00000000000000000000000000000000000000006967
155.0
View
LYD1_k127_52333_5
-
-
-
-
0.0000000001414
68.0
View
LYD1_k127_52333_6
Copper resistance protein CopZ
K07213
-
-
0.00002072
49.0
View
LYD1_k127_5244478_0
this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
K03667
-
-
8.815e-208
654.0
View
LYD1_k127_5244478_1
Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
K00975
-
2.7.7.27
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002189
570.0
View
LYD1_k127_5244478_2
Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
K04094
GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363
2.1.1.74
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006972
491.0
View
LYD1_k127_5244478_3
Amino acid kinase family
K00930
GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
2.7.2.8
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002747
364.0
View
LYD1_k127_5244478_4
Phage integrase, N-terminal SAM-like domain
K03733
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008717
354.0
View
LYD1_k127_5244478_5
Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
K01419
-
3.4.25.2
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002948
276.0
View
LYD1_k127_5244478_6
Formylmethanofuran dehydrogenase, subunit e
K11261
-
1.2.7.12
0.0000000000000000000000000000000000000000000000000000000000000000002373
234.0
View
LYD1_k127_5244478_7
PFAM phosphoesterase RecJ domain protein
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000001363
240.0
View
LYD1_k127_5244478_8
Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
K03642
-
-
0.000000000000000000000000000000000000000000000000000000000000000007069
232.0
View
LYD1_k127_5244478_9
Voltage gated chloride channel
K03281
-
-
0.000009893
50.0
View
LYD1_k127_5261084_0
Domain in cystathionine beta-synthase and other proteins.
K07182
-
-
2.098e-217
687.0
View
LYD1_k127_5261084_1
SMART PAS domain containing protein
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002523
571.0
View
LYD1_k127_5261084_2
Sigma-54 interaction domain
K07714
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000138
471.0
View
LYD1_k127_5261084_3
Protein of unknown function, DUF488
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000002206
239.0
View
LYD1_k127_5278262_0
tRNA synthetases class I (E and Q), anti-codon binding domain
K01886
-
6.1.1.18
4.765e-264
824.0
View
LYD1_k127_5278262_1
Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide
K00639
-
2.3.1.29
2.665e-203
639.0
View
LYD1_k127_5278262_10
Domain of unknown function (DUF4115)
-
-
-
0.0000000000000004576
87.0
View
LYD1_k127_5278262_11
Catalase
K03781
-
1.11.1.6
0.00000000004487
66.0
View
LYD1_k127_5278262_2
Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
K01885
-
6.1.1.17
2.101e-202
640.0
View
LYD1_k127_5278262_3
Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
K04075
-
6.3.4.19
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006254
488.0
View
LYD1_k127_5278262_4
acetyltransferase
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225
404.0
View
LYD1_k127_5278262_5
NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
K00057
-
1.1.1.94
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006359
384.0
View
LYD1_k127_5278262_6
Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
K09458
-
2.3.1.179
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006682
357.0
View
LYD1_k127_5278262_7
(AIR) carboxylase
K06898
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000001941
267.0
View
LYD1_k127_5278262_8
ADP-glyceromanno-heptose 6-epimerase activity
K01784
-
5.1.3.2
0.000000000000000000000000000000000000000002496
167.0
View
LYD1_k127_5278262_9
PFAM Rubrerythrin
-
-
-
0.000000000000000000000000004065
111.0
View
LYD1_k127_5279801_0
AAA domain
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002183
298.0
View
LYD1_k127_5279801_1
Tetratricopeptide repeat
-
-
-
0.000000000000000000000000000000000000000000000000000002229
217.0
View
LYD1_k127_5280739_0
Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen
K00525
-
1.17.4.1
5.662e-260
814.0
View
LYD1_k127_5280739_1
The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
K01056
GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101
3.1.1.29
0.0000000000000000000000000000000000000000000000000000000002163
207.0
View
LYD1_k127_5280739_2
This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
K02897
GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.000000000000000000000000000000000000000000000000000000002617
207.0
View
LYD1_k127_5280739_3
Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
K00948
-
2.7.6.1
0.00000000000000000000000000000000000000000000000000000007336
198.0
View
LYD1_k127_5280739_4
Bacterial regulatory protein, Fis family
-
-
-
0.00002283
49.0
View
LYD1_k127_5288609_0
GTP-binding protein TypA
K06207
-
-
7.103e-262
818.0
View
LYD1_k127_5288609_1
Belongs to the glycosyl hydrolase 57 family
K16149
-
2.4.1.18
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002113
550.0
View
LYD1_k127_5288609_10
Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
K00826
-
2.6.1.42
0.0000000000000000000000000000000000000000000000000000000000000000000000001739
257.0
View
LYD1_k127_5288609_11
Predicted permease YjgP/YjgQ family
K07091
-
-
0.00000000000000000000000000000000000000000000000000000000000000003385
240.0
View
LYD1_k127_5288609_12
Predicted permease YjgP/YjgQ family
K11720
-
-
0.00000000000000000000000000000000000000000000000000000000001289
219.0
View
LYD1_k127_5288609_13
Signal transduction histidine kinase, nitrogen specific
K07708
GO:0000155,GO:0000160,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0004721,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0006464,GO:0006468,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016311,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0016787,GO:0016788,GO:0016791,GO:0018106,GO:0018193,GO:0018202,GO:0019222,GO:0019538,GO:0023014,GO:0023052,GO:0035556,GO:0036211,GO:0042578,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051716,GO:0065007,GO:0071704,GO:0140096,GO:1901564
2.7.13.3
0.0000000000000000000000000000000000000000000000000246
192.0
View
LYD1_k127_5288609_14
Yqey-like protein
K09117
-
-
0.0000000000000000000000000000000000000004017
153.0
View
LYD1_k127_5288609_15
C4-type zinc ribbon domain
K07164
-
-
0.0000000000000000000000000000000003122
137.0
View
LYD1_k127_5288609_16
Ribosomal protein S21
K02970
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904
-
0.000000000000000000005429
93.0
View
LYD1_k127_5288609_17
-
-
-
-
0.000002525
49.0
View
LYD1_k127_5288609_19
-
-
-
-
0.0001385
46.0
View
LYD1_k127_5288609_2
Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
K00384
-
1.8.1.9
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005217
506.0
View
LYD1_k127_5288609_20
-
-
-
-
0.000359
49.0
View
LYD1_k127_5288609_3
RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
K02316
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000278
432.0
View
LYD1_k127_5288609_4
response regulator
K07712
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003024
413.0
View
LYD1_k127_5288609_5
Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
K03086
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002414
413.0
View
LYD1_k127_5288609_6
Transcriptional regulator
K11921,K19338
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007108
378.0
View
LYD1_k127_5288609_7
Phosphomethylpyrimidine kinase
K03272
-
2.7.1.167,2.7.7.70
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005636
359.0
View
LYD1_k127_5288609_8
Thiamine biosynthesis protein (ThiI)
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151
310.0
View
LYD1_k127_5293635_0
Universal stress protein family
K07090
-
-
0.000000000000000000000000000000000000000000000000000000454
204.0
View
LYD1_k127_5293635_1
Domain of unknown function (DUF3786)
-
-
-
0.00000000000000000000000000000000000000000004532
167.0
View
LYD1_k127_5293635_2
-
-
-
-
0.0000000000000000006596
87.0
View
LYD1_k127_5321155_0
Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine
K04487
-
2.8.1.7
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001507
548.0
View
LYD1_k127_5321155_1
RmuC family
K09760
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004904
404.0
View
LYD1_k127_5321155_2
May be involved in the formation or repair of Fe-S clusters present in iron-sulfur proteins
K13819
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127
355.0
View
LYD1_k127_5321155_3
Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
K03814
-
2.4.1.129
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232
322.0
View
LYD1_k127_5321155_4
GYD domain
-
-
-
0.000000000000000000000000000000000009372
138.0
View
LYD1_k127_5321155_5
sulfur carrier activity
K04085
-
-
0.00000000000000000000000117
104.0
View
LYD1_k127_5321155_6
-
-
-
-
0.0000009973
51.0
View
LYD1_k127_5324607_0
Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen
K00525
-
1.17.4.1
0.0
1024.0
View
LYD1_k127_5324607_1
-
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004269
416.0
View
LYD1_k127_5324607_2
phosphatase activity
K20881
GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008252,GO:0008253,GO:0008477,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0016798,GO:0016799,GO:0030145,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0050483,GO:0050484
3.1.3.5
0.000000000000000000000000000000000000000000000000000000000000000000000000006428
256.0
View
LYD1_k127_5324607_3
denitrification pathway
K02569,K15876
-
-
0.000000000000000000000000000000000000000000000000158
190.0
View
LYD1_k127_5324607_5
Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
K09888
-
-
0.00000000000000007389
84.0
View
LYD1_k127_5334417_0
DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
K01972
GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360
6.5.1.2
1.641e-286
893.0
View
LYD1_k127_5334417_1
Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
K00764
-
2.4.2.14
7.974e-223
700.0
View
LYD1_k127_5334417_2
cobalt ion transport
K02007,K02009,K16915
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004648
400.0
View
LYD1_k127_5334417_3
part of an ABC transporter complex. Responsible for energy coupling to the transport system
K02006,K16787
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002685
325.0
View
LYD1_k127_5334417_4
Cobalt transport protein
K02008
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000005041
277.0
View
LYD1_k127_5334417_5
ABC transporter, phosphonate, periplasmic substrate-binding protein
K02044
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000005884
251.0
View
LYD1_k127_5334417_6
NUDIX domain
K01515
-
3.6.1.13
0.0000000000000000000000000000000000000000000000007828
180.0
View
LYD1_k127_5334417_7
MgtC family
K07507
-
-
0.0000000000000000000000000000000000008689
147.0
View
LYD1_k127_5334417_8
CutA1 divalent ion tolerance protein
K03926
-
-
0.000000000000000000000000000000006947
131.0
View
LYD1_k127_5418558_0
Bacterial regulatory protein, Fis family
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165
550.0
View
LYD1_k127_5418558_1
PFAM GGDEF domain containing protein
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000002981
295.0
View
LYD1_k127_5418558_2
His Kinase A (phosphoacceptor) domain
K07708
-
2.7.13.3
0.0000000000000000000000000000000000000000000000000000000000000000000000000002464
268.0
View
LYD1_k127_5418558_3
Nitroreductase
-
-
-
0.0000000000000000000000000000000000000000004616
163.0
View
LYD1_k127_5418558_4
transposition
-
-
-
0.0001273
45.0
View
LYD1_k127_5418558_5
Transposase
-
-
-
0.0005621
42.0
View
LYD1_k127_5419435_0
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006661
447.0
View
LYD1_k127_5419435_1
Two component, sigma54 specific, transcriptional regulator, Fis family
-
-
-
0.000000002702
59.0
View
LYD1_k127_5419435_2
DNA polymerase X family
K02347
-
-
0.0000005859
51.0
View
LYD1_k127_5446166_0
TIGRFAM Carbon-monoxide dehydrogenase, catalytic subunit
K00198
-
1.2.7.4
1.5e-323
1000.0
View
LYD1_k127_5446166_1
DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
K03581
-
3.1.11.5
2.776e-292
913.0
View
LYD1_k127_5446166_10
PFAM Integral membrane protein TerC
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000006118
271.0
View
LYD1_k127_5446166_11
Cytidylate kinase-like family
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000001802
250.0
View
LYD1_k127_5446166_12
Uracil DNA glycosylase superfamily
K21929
-
3.2.2.27
0.000000000000000000000000000000000000000000000000000000000000000002184
234.0
View
LYD1_k127_5446166_13
Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
K05896
-
-
0.000000000000000000000000000000000000000000000000000000000008089
215.0
View
LYD1_k127_5446166_14
CHASE
K02488,K21009
-
2.7.7.65
0.0000000000000000000000000000000000000000000000000000001117
211.0
View
LYD1_k127_5446166_15
NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
-
-
-
0.00000000000000000000000000000000000000000000000000002044
194.0
View
LYD1_k127_5446166_16
PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
K00334
-
1.6.5.3
0.0000000000000000000000000000000000000000000000000003673
188.0
View
LYD1_k127_5446166_17
phosphate ion binding
K02040
-
-
0.00000000000000000000000000000000000000000006134
171.0
View
LYD1_k127_5446166_18
PFAM CBS domain
-
-
-
0.000000000000000000000000000000000004654
141.0
View
LYD1_k127_5446166_19
Hydrolase, P-loop family
K06925
-
-
0.000000000000000000000003659
107.0
View
LYD1_k127_5446166_2
PFAM CO dehydrogenase acetyl-CoA synthase complex beta subunit
K14138
-
2.3.1.169
4.78e-268
844.0
View
LYD1_k127_5446166_20
PFAM Methylamine
-
-
-
0.000000000000000264
85.0
View
LYD1_k127_5446166_21
PFAM ATP-binding region, ATPase domain protein
K02486
-
2.7.13.3
0.000005476
57.0
View
LYD1_k127_5446166_22
peptidyl-tyrosine sulfation
-
-
-
0.0004021
47.0
View
LYD1_k127_5446166_3
NADH dehydrogenase
-
-
-
2.236e-227
720.0
View
LYD1_k127_5446166_4
NADH ubiquinone oxidoreductase, subunit G, iron-sulphur binding
K00123,K00336,K05299,K06441
-
1.12.7.2,1.17.1.10,1.17.1.9,1.6.5.3
2.754e-224
713.0
View
LYD1_k127_5446166_5
TIGRFAM glutamate synthase (NADPH), homotetrameric
K00266
-
1.4.1.13,1.4.1.14
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001753
605.0
View
LYD1_k127_5446166_6
Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain
K00528,K16951
-
1.18.1.2,1.19.1.1
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004564
336.0
View
LYD1_k127_5446166_7
acetyl-CoA catabolic process
K00197
-
2.1.1.245
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003463
319.0
View
LYD1_k127_5446166_8
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002002
325.0
View
LYD1_k127_5446166_9
Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
K00858
GO:0000166,GO:0003674,GO:0003824,GO:0003951,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006741,GO:0006753,GO:0006766,GO:0006767,GO:0006769,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008976,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009820,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016776,GO:0017076,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576
2.7.1.23
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445
314.0
View
LYD1_k127_5450460_0
PFAM Uncharacterised protein family UPF0182
K09118
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025
548.0
View
LYD1_k127_5470508_0
damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
K03702
-
-
4.223e-278
869.0
View
LYD1_k127_5470508_1
Ribosomal protein S1-like RNA-binding domain
K02945
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007388
524.0
View
LYD1_k127_5470508_2
Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
K01491
GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114
1.5.1.5,3.5.4.9
0.00000000000000000000000000000000000000000000000000000000000000000000000000000001642
278.0
View
LYD1_k127_5470508_3
ABC-2 type transporter
K09690
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000001633
248.0
View
LYD1_k127_5470508_4
glycolate biosynthetic process
K01091
-
3.1.3.18
0.0000000000000000000000000000000000000000000000000000000000000000000002431
244.0
View
LYD1_k127_5470508_5
KOW (Kyprides, Ouzounis, Woese) motif.
K05785
-
-
0.000000000000000000000000000000000001314
144.0
View
LYD1_k127_5470508_6
DNA-binding transcription factor activity
K18996
-
-
0.000000000000000000000000374
110.0
View
LYD1_k127_5475050_0
Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
K02355
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005579
381.0
View
LYD1_k127_5475050_1
One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
K02992
GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.00000000000000000000000000000000000000000000000000000000000000000000002736
243.0
View
LYD1_k127_5475050_2
Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
K02950
-
-
0.000000000000000000000000000000000000000000000000000000000002104
213.0
View
LYD1_k127_5475050_3
PFAM AICARFT IMPCHase bienzyme
K00602
-
2.1.2.3,3.5.4.10
0.0000000000000000000000000000000001679
133.0
View
LYD1_k127_5476678_0
Aminotransferase class I and II
K14261
-
-
1.829e-213
671.0
View
LYD1_k127_5476678_1
Homoserine dehydrogenase
K00003
-
1.1.1.3
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003292
539.0
View
LYD1_k127_5476678_10
'Cold-shock' DNA-binding domain
K03704
-
-
0.000000000000000000000000000007043
119.0
View
LYD1_k127_5476678_11
metallopeptidase activity
-
-
-
0.0000000000000548
85.0
View
LYD1_k127_5476678_12
-
-
-
-
0.000000000001305
70.0
View
LYD1_k127_5476678_2
Probable molybdopterin binding domain
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006391
410.0
View
LYD1_k127_5476678_3
Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
K00604
GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576
2.1.2.9
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005028
332.0
View
LYD1_k127_5476678_4
Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
K03644
-
2.8.1.8
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004171
328.0
View
LYD1_k127_5476678_5
RadC-like JAB domain
K03630
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000003477
251.0
View
LYD1_k127_5476678_6
Protein of unknown function DUF116
K09729
-
-
0.00000000000000000000000000000000000000000000000000000000000001297
219.0
View
LYD1_k127_5476678_7
Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
K01462
GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564
3.5.1.88
0.000000000000000000000000000000000000000000000000000000000169
209.0
View
LYD1_k127_5476678_8
Carboxypeptidase regulatory-like domain
-
-
-
0.0000000000000000000000000000000000005982
156.0
View
LYD1_k127_5476678_9
Nitroreductase family
-
-
-
0.00000000000000000000000000000001262
135.0
View
LYD1_k127_5477831_0
Belongs to the UDP-glucose GDP-mannose dehydrogenase family
K13015
-
1.1.1.136
2.281e-225
704.0
View
LYD1_k127_5477831_1
Bacterial sugar transferase
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002441
529.0
View
LYD1_k127_5477831_10
AAA domain
K08252
-
2.7.10.1
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665
300.0
View
LYD1_k127_5477831_11
-
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001472
289.0
View
LYD1_k127_5477831_12
Transcription termination factor nusG
-
-
-
0.0000000000000000000000000000000000000000000000000002106
190.0
View
LYD1_k127_5477831_13
ABC-2 type transporter
K09690
-
-
0.00000000000000000035
90.0
View
LYD1_k127_5477831_14
Tetratricopeptide repeat
-
-
-
0.000000000000000002344
87.0
View
LYD1_k127_5477831_15
Serine threonine protein kinase
K12132
-
2.7.11.1
0.00000005064
62.0
View
LYD1_k127_5477831_2
Chain length determinant protein
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002984
509.0
View
LYD1_k127_5477831_3
asparagine synthase
K01953
-
6.3.5.4
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004261
474.0
View
LYD1_k127_5477831_4
UDP-N-acetylglucosamine 2-epimerase
K01791
-
5.1.3.14
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005729
422.0
View
LYD1_k127_5477831_5
AAA domain
K02450
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001521
385.0
View
LYD1_k127_5477831_6
Acetyltransferase (GNAT) domain
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456
325.0
View
LYD1_k127_5477831_7
Glycosyl transferases group 1
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003568
326.0
View
LYD1_k127_5477831_8
Domain of unknown function (DUF3473)
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001751
318.0
View
LYD1_k127_5477831_9
Polysaccharide biosynthesis/export protein
K01991
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007964
307.0
View
LYD1_k127_5478916_0
Cation transporter/ATPase, N-terminus
K01531,K12955
-
3.6.3.2
0.0
1202.0
View
LYD1_k127_5478916_1
TatD related DNase
K03424
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008924
551.0
View
LYD1_k127_5478916_10
Conserved hypothetical protein 698
-
-
-
0.0000000000000045
87.0
View
LYD1_k127_5478916_2
2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity
K15635
-
5.4.2.12
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008072
527.0
View
LYD1_k127_5478916_3
PFAM Cobyrinic acid ac-diamide synthase
K07321
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000001876
250.0
View
LYD1_k127_5478916_4
Domain present in phytochromes and cGMP-specific phosphodiesterases.
-
-
-
0.0000000000000000000000000000000000000000000000000000002459
207.0
View
LYD1_k127_5478916_5
Histidyl-tRNA synthetase
K01892
-
6.1.1.21
0.0000000000000000000000000000000000000000000000000004562
190.0
View
LYD1_k127_5478916_6
Histidine kinase
-
-
-
0.000000000000000000000000000000000000000000000002746
199.0
View
LYD1_k127_5478916_7
cheY-homologous receiver domain
-
-
-
0.000000000000000000000000000001013
125.0
View
LYD1_k127_5478916_8
S4 domain
K14761
-
-
0.000000000000000000002283
95.0
View
LYD1_k127_5478916_9
Toxic component of a toxin-antitoxin (TA) module. An RNase
-
-
-
0.0000000000000000004303
92.0
View
LYD1_k127_5487856_0
amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
K01870
-
6.1.1.5
0.0
1237.0
View
LYD1_k127_5487856_1
Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
K00560
-
2.1.1.45
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003409
357.0
View
LYD1_k127_5487856_2
Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
K17758,K17759
-
4.2.1.136,5.1.99.6
0.00000000000000000000000000000000000000000000000000000000000000000000000000002719
266.0
View
LYD1_k127_5487856_3
Belongs to the multicopper oxidase YfiH RL5 family
K05810
-
-
0.000000000000000000000000000000000000000000000000000249
192.0
View
LYD1_k127_5487927_0
Protein of unknown function, DUF255
K06888
-
-
1.553e-251
792.0
View
LYD1_k127_5487927_1
Domain in cystathionine beta-synthase and other proteins.
K07182
-
-
1.025e-196
632.0
View
LYD1_k127_5487927_10
Belongs to the universal stress protein A family
-
-
-
0.00000000000000000000000000000000000000000007643
167.0
View
LYD1_k127_5487927_11
methyltransferase activity
-
-
-
0.00000000000000000000000000000000000000005113
158.0
View
LYD1_k127_5487927_13
Response regulator receiver
-
-
-
0.000000000000000000000000004455
115.0
View
LYD1_k127_5487927_15
-
-
-
-
0.00000000000001646
75.0
View
LYD1_k127_5487927_2
PFAM natural resistance-associated macrophage protein
K03322
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002264
518.0
View
LYD1_k127_5487927_3
DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA
K03732
-
3.6.4.13
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003719
493.0
View
LYD1_k127_5487927_4
SMART Elongator protein 3 MiaB NifB
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061
445.0
View
LYD1_k127_5487927_5
Pyridine nucleotide-disulphide oxidoreductase
K00384
-
1.8.1.9
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004231
287.0
View
LYD1_k127_5487927_6
DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
K10773
-
4.2.99.18
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006602
280.0
View
LYD1_k127_5487927_7
DJ-1/PfpI family
K05520
-
3.5.1.124
0.000000000000000000000000000000000000000000000000000000000000000000002206
239.0
View
LYD1_k127_5487927_8
Domain of unknown function (DUF4337)
-
-
-
0.000000000000000000000000000000000000000000000000000000000000001461
223.0
View
LYD1_k127_5487927_9
Protein of unknown function (DUF1255)
K09913
-
2.4.2.1,2.4.2.2
0.00000000000000000000000000000000000000000000002766
171.0
View
LYD1_k127_5489169_0
Phosphoglycerate kinase
K00927
-
2.7.2.3
1.876e-199
627.0
View
LYD1_k127_5489169_1
Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
K00013
-
1.1.1.23
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004944
515.0
View
LYD1_k127_5489169_10
Lactonase, 7-bladed beta-propeller
-
-
-
0.0000000004009
74.0
View
LYD1_k127_5489169_2
Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
K00134
-
1.2.1.12
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003133
481.0
View
LYD1_k127_5489169_3
Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
K00765
GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
2.4.2.17
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008885
431.0
View
LYD1_k127_5489169_4
Protein of unknown function (DUF1015)
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005953
372.0
View
LYD1_k127_5489169_5
-
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000005469
238.0
View
LYD1_k127_5489169_6
Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
K01611
-
4.1.1.50
0.00000000000000000000000000000000000000000000000000000000000000001623
226.0
View
LYD1_k127_5489169_7
metal-dependent phosphohydrolase HD region
-
-
-
0.0000000000000000000000000000000000000000000000000000000004425
218.0
View
LYD1_k127_5489169_8
nucleoside hydrolase
-
-
-
0.000000000000000000000000000000000000001179
170.0
View
LYD1_k127_5489169_9
-
-
-
-
0.00000000000000000000000004276
110.0
View
LYD1_k127_5489609_0
TIGRFAM hopanoid biosynthesis associated glycosyl transferase protein HpnI
K00720
-
2.4.1.80
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000168
280.0
View
LYD1_k127_5491940_0
COG1680 Beta-lactamase class C and other penicillin binding proteins
-
-
-
3.705e-274
865.0
View
LYD1_k127_5491940_1
Putative glycosyl hydrolase domain
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214
477.0
View
LYD1_k127_5491940_10
-
-
-
-
0.00000000008849
63.0
View
LYD1_k127_5491940_11
PFAM NAD-dependent epimerase dehydratase
-
-
-
0.00002314
47.0
View
LYD1_k127_5491940_2
Protein of unknown function (DUF1722)
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005285
441.0
View
LYD1_k127_5491940_3
PFAM Polysaccharide deacetylase
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008249
340.0
View
LYD1_k127_5491940_4
Protein of unknown function (DUF3641)
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225
336.0
View
LYD1_k127_5491940_6
aminopeptidase N
-
-
-
0.0000000000000000000000000000000000000000000000000000001502
207.0
View
LYD1_k127_5491940_8
Membrane
-
-
-
0.00000000000000000000001066
109.0
View
LYD1_k127_5491940_9
translation initiation factor activity
K03646
-
-
0.00000000003794
73.0
View
LYD1_k127_5508337_0
Outer membrane efflux protein
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002246
346.0
View
LYD1_k127_5508337_1
AAA domain, putative AbiEii toxin, Type IV TA system
K01990
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003783
317.0
View
LYD1_k127_5508337_2
ABC-2 family transporter protein
K01992
-
-
0.000000000000000000000000000000000000000001033
168.0
View
LYD1_k127_5508337_3
Barrel-sandwich domain of CusB or HlyD membrane-fusion
K01993
-
-
0.000000000000000000000000002302
124.0
View
LYD1_k127_5516702_0
Belongs to the GARS family
K01945
-
6.3.4.13
0.00000000000000000000000000000000000000000000000000000000000000000000000004646
254.0
View
LYD1_k127_5516702_1
Protein of unknown function DUF89
K09116
-
-
0.0000000000000000000000000000000000000000000000000000000000000000005324
238.0
View
LYD1_k127_5516702_2
Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
K01945
-
6.3.4.13
0.00000000000000000000000000000000000000000000000000000007236
200.0
View
LYD1_k127_5516702_3
PFAM RNP-1 like RNA-binding protein
-
-
-
0.000000000000000000000001245
107.0
View
LYD1_k127_5519928_0
Penicillin-binding Protein dimerisation domain
K03587
-
3.4.16.4
2.529e-194
621.0
View
LYD1_k127_5519928_1
DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
K04485
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382
561.0
View
LYD1_k127_5519928_10
MraZ protein, putative antitoxin-like
K03925
-
-
0.00000000000000000000000000000000000000000000007078
173.0
View
LYD1_k127_5519928_11
-
-
-
-
0.0000000000000000000000000000000004247
134.0
View
LYD1_k127_5519928_12
RNA-binding protein containing a PIN domain
K06962
-
-
0.000000000000000000000000000000001181
135.0
View
LYD1_k127_5519928_13
First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
K01000
-
2.7.8.13
0.0000000000000000000007793
97.0
View
LYD1_k127_5519928_15
Belongs to the UPF0235 family
K09131
-
-
0.000000000000004477
78.0
View
LYD1_k127_5519928_16
Chemotaxis sensory transducer
K03406
-
-
0.00000000001197
68.0
View
LYD1_k127_5519928_19
Evidence 5 No homology to any previously reported sequences
-
-
-
0.00004371
53.0
View
LYD1_k127_5519928_2
acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
K01928
-
6.3.2.13
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003198
458.0
View
LYD1_k127_5519928_3
Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
K01929
-
6.3.2.10
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002937
366.0
View
LYD1_k127_5519928_4
Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
K03438
GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360
2.1.1.199
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429
326.0
View
LYD1_k127_5519928_5
Histidine kinase
K07641,K07642,K07711
-
2.7.13.3
0.0000000000000000000000000000000000000000000000000000000000000000000000000001253
274.0
View
LYD1_k127_5519928_6
phosphatidate phosphatase activity
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000001931
264.0
View
LYD1_k127_5519928_7
Transcriptional regulator
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000004214
247.0
View
LYD1_k127_5519928_8
Rhomboid family
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000597
237.0
View
LYD1_k127_5519928_9
Cytochrome C biogenesis protein transmembrane region
K06196
-
-
0.000000000000000000000000000000000000000000000000004859
186.0
View
LYD1_k127_5541508_0
radical SAM domain protein
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005455
445.0
View
LYD1_k127_5541508_1
the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
K03664
-
-
0.000000000000000000000000000000000000000000000000000000000000000006009
227.0
View
LYD1_k127_5541508_2
LysE type translocator
-
-
-
0.00000000000000000000000000000000000007623
149.0
View
LYD1_k127_5541508_3
Protein of unknown function (DUF2934)
-
-
-
0.000000566
54.0
View
LYD1_k127_5541508_4
Putative regulatory protein
-
-
-
0.0000007365
52.0
View
LYD1_k127_5544163_0
DNA polymerase LigD polymerase domain
K01971
-
6.5.1.1
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006767
304.0
View
LYD1_k127_5544163_1
Protein of unknown function DUF72
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000004684
263.0
View
LYD1_k127_5544163_2
DNA ligase
K01971
-
6.5.1.1
0.00000000000000000000000000000000000000000000000000000000000000000002919
239.0
View
LYD1_k127_5544163_3
With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
K10979
-
-
0.0000000000000000000000000000000000000000000003654
177.0
View
LYD1_k127_5544163_4
Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
K03183
-
2.1.1.163,2.1.1.201
0.000000000000000000000000000000000000000000005614
173.0
View
LYD1_k127_5544163_5
With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
K10979
-
-
0.0000000000000000000000000000000000000003046
160.0
View
LYD1_k127_5545026_0
Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
-
-
-
0.0
1086.0
View
LYD1_k127_5557784_0
amine dehydrogenase activity
-
-
-
2.503e-199
632.0
View
LYD1_k127_5557784_1
FtsX-like permease family
K02004
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239
426.0
View
LYD1_k127_5557784_10
membrane transporter protein
K07090
-
-
0.00000001553
57.0
View
LYD1_k127_5557784_11
ACT domain
K01653
-
2.2.1.6
0.000006978
48.0
View
LYD1_k127_5557784_2
MacB-like periplasmic core domain
K02004
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003119
393.0
View
LYD1_k127_5557784_3
Bacterial regulatory protein, Fis family
K02481,K07714
GO:0003674,GO:0003700,GO:0004857,GO:0006355,GO:0008073,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0010967,GO:0019219,GO:0019222,GO:0030234,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0033238,GO:0042979,GO:0043086,GO:0044092,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0065009,GO:0080090,GO:0098772,GO:0140110,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007835
356.0
View
LYD1_k127_5557784_4
Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides
K02003
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000001767
254.0
View
LYD1_k127_5557784_5
PFAM ABC transporter related
K02003
-
-
0.00000000000000000000000000000000000000000000000000000000000000126
225.0
View
LYD1_k127_5557784_6
phosphorelay sensor kinase activity
K02491,K07697
-
2.7.13.3
0.0000000000000000000000000000000000000000000000007587
195.0
View
LYD1_k127_5557784_7
lipoprotein transporter activity
K02003,K02065,K06857,K09810,K09812
-
3.6.3.55
0.00000000000000000000000006742
115.0
View
LYD1_k127_5557784_8
(ABC) transporter
-
-
-
0.000000000000002581
84.0
View
LYD1_k127_5557784_9
DsrE/DsrF/DrsH-like family
-
-
-
0.00000000000002355
78.0
View
LYD1_k127_5591951_0
Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
K01652
-
2.2.1.6
5.647e-296
915.0
View
LYD1_k127_5591951_1
Synthesizes selenophosphate from selenide and ATP
K01008
-
2.7.9.3
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000631
318.0
View
LYD1_k127_5591951_2
ACT domain
K01653
-
2.2.1.6
0.00000000000000000000000000000000000000000000000000000000000000000000000000009538
259.0
View
LYD1_k127_5591951_3
membrane transporter protein
K07090
-
-
0.00000000000000000000000000000000000000000000000000000000000006533
222.0
View
LYD1_k127_5591951_4
DNA-binding transcription factor activity
K03655,K03892,K21903
-
3.6.4.12
0.000000000000001451
79.0
View
LYD1_k127_5610545_1
Ammonium Transporter
K03320
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006833
497.0
View
LYD1_k127_5610545_2
-
-
-
-
0.0000000000000000000009754
100.0
View
LYD1_k127_5610545_3
PFAM sigma-54 factor interaction domain-containing protein
K02584
-
-
0.00000003119
59.0
View
LYD1_k127_5610694_0
Aminotransferase class I and II
K00817
-
2.6.1.9
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000869
373.0
View
LYD1_k127_5610694_1
phosphatase activity
K20881
GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008252,GO:0008253,GO:0008477,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0016798,GO:0016799,GO:0030145,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0050483,GO:0050484
3.1.3.5
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004021
282.0
View
LYD1_k127_5610694_2
imidazoleglycerol-phosphate dehydratase activity
K01693
GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
4.2.1.19
0.0000000000000000000000000000000000000000000000000000000000000000000000005497
251.0
View
LYD1_k127_5610694_3
electron transfer activity
K05337,K17247
-
-
0.00002856
46.0
View
LYD1_k127_5626089_0
Sigma-54 interaction domain
-
-
-
9.098e-212
666.0
View
LYD1_k127_5626089_1
Histidine kinase
K07709
-
2.7.13.3
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006566
329.0
View
LYD1_k127_5626089_2
membrane transporter protein
K07090
-
-
0.000000000000000001644
86.0
View
LYD1_k127_5626089_4
methyl-accepting chemotaxis protein
K03406
-
-
0.0001682
46.0
View
LYD1_k127_5627699_0
Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
K01881
-
6.1.1.15
9.577e-241
756.0
View
LYD1_k127_5627699_1
response to heat
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003601
549.0
View
LYD1_k127_5627699_10
Zinc metalloprotease (Elastase)
K01400,K08604
-
3.4.24.25,3.4.24.28
0.0000002718
63.0
View
LYD1_k127_5627699_2
Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs
K08300
-
3.1.26.12
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404
441.0
View
LYD1_k127_5627699_3
Uncharacterised ArCR, COG2043
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001702
389.0
View
LYD1_k127_5627699_4
ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
K06942
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002808
327.0
View
LYD1_k127_5627699_5
membrane transporter protein
K07090
-
-
0.00000000000000000000000000000000000000000000000000000000000003502
218.0
View
LYD1_k127_5627699_6
CHASE
K02488,K21009
-
2.7.7.65
0.000000000000000000000000000000000000000000000000000000008302
213.0
View
LYD1_k127_5627699_7
isopentenyl-diphosphate delta-isomerase activity
K00949,K01823
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464
2.7.6.2,5.3.3.2
0.000000000000000000000000000000000000000000000000003086
190.0
View
LYD1_k127_5627699_8
AMP binding
K03499,K06149
-
-
0.0000000000000000000000000000000000004194
144.0
View
LYD1_k127_5627699_9
-
-
-
-
0.000000000000000000004668
96.0
View
LYD1_k127_5628667_0
Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
K00700
-
2.4.1.18
1.685e-317
987.0
View
LYD1_k127_5628667_1
Nicotinic acid phosphoribosyltransferase
K00763
-
6.3.4.21
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289
501.0
View
LYD1_k127_5628667_10
ABC transporter substrate binding protein
K01989
-
-
0.000000000000000000000001231
116.0
View
LYD1_k127_5628667_11
-
-
-
-
0.00000000000000000000000352
110.0
View
LYD1_k127_5628667_13
-
-
-
-
0.00000002714
59.0
View
LYD1_k127_5628667_2
Adenylyl cyclase class-3 4 guanylyl cyclase
K01768
-
4.6.1.1
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004033
467.0
View
LYD1_k127_5628667_3
membrane transporter protein
K07090
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003762
378.0
View
LYD1_k127_5628667_4
cytochrome C
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004618
383.0
View
LYD1_k127_5628667_5
Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
K03406
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002814
314.0
View
LYD1_k127_5628667_6
FtsJ-like methyltransferase
K06442
-
2.1.1.226,2.1.1.227
0.0000000000000000000000000000000000000000000000000000000000000000000000000000008377
271.0
View
LYD1_k127_5628667_7
Phosphatidylethanolamine-binding protein
K06910
-
-
0.0000000000000000000000000000000000000000000000000000000000000000342
229.0
View
LYD1_k127_5628667_8
-
-
-
-
0.0000000000000000000000000000000000000000000721
183.0
View
LYD1_k127_5628667_9
zinc-ribbon domain
-
-
-
0.0000000000000000000000000000000002281
132.0
View
LYD1_k127_5653525_0
helicase superfamily c-terminal domain
K11927
-
3.6.4.13
1.985e-198
627.0
View
LYD1_k127_5653525_1
Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
K00797
-
2.5.1.16
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000185
607.0
View
LYD1_k127_5653525_10
ABC transporter
K02003
-
-
0.0000000000000000000000000000000000000000000000000000000000000000001281
236.0
View
LYD1_k127_5653525_11
Tetratricopeptide repeat
-
-
-
0.0000000000000000000000000007153
126.0
View
LYD1_k127_5653525_12
-
-
-
-
0.0000000000002277
73.0
View
LYD1_k127_5653525_13
Domain of Unknown Function (DUF350)
-
-
-
0.00000000004698
65.0
View
LYD1_k127_5653525_2
MacB-like periplasmic core domain
K02004
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005735
595.0
View
LYD1_k127_5653525_3
PFAM SPFH domain Band 7 family
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002394
529.0
View
LYD1_k127_5653525_4
oxidoreductase activity
K00316
-
1.5.99.6
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004047
530.0
View
LYD1_k127_5653525_5
Creatinase/Prolidase N-terminal domain
K01262,K01271
-
3.4.11.9,3.4.13.9
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002697
484.0
View
LYD1_k127_5653525_6
Domain of unknown function (DUF4178)
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002435
465.0
View
LYD1_k127_5653525_7
Lipocalin-like domain
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004985
302.0
View
LYD1_k127_5653525_8
Spermidine synthase
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000863
276.0
View
LYD1_k127_5653525_9
Rubrerythrin
-
GO:0003674,GO:0005488,GO:0005506,GO:0043167,GO:0043169,GO:0046872,GO:0046914
-
0.0000000000000000000000000000000000000000000000000000000000000000000000001418
250.0
View
LYD1_k127_5805900_0
ATPase, P-type (transporting), HAD superfamily, subfamily IC
K01533,K17686
-
3.6.3.4,3.6.3.54
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209
321.0
View
LYD1_k127_5805900_1
Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
K06898,K09121
-
4.99.1.12
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000042
297.0
View
LYD1_k127_5827756_0
Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
K01547
-
3.6.3.12
0.0
1006.0
View
LYD1_k127_5827756_1
Osmosensitive K+ channel His kinase sensor domain
K07646
-
2.7.13.3
4.165e-313
982.0
View
LYD1_k127_5827756_2
ATPase, P-type (transporting), HAD superfamily, subfamily IC
K01537,K01539
-
3.6.3.8,3.6.3.9
4.406e-269
838.0
View
LYD1_k127_5827756_3
Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
K01546
GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0008556,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0030312,GO:0030955,GO:0031004,GO:0031224,GO:0031226,GO:0031420,GO:0032991,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043167,GO:0043169,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0046872,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0071944,GO:0090533,GO:0090662,GO:0098533,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1902494,GO:1902495,GO:1904949,GO:1990351
3.6.3.12
1.179e-265
831.0
View
LYD1_k127_5827756_4
Transcriptional regulatory protein, C terminal
K07667
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167
314.0
View
LYD1_k127_5827756_5
Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
K01548
-
3.6.3.12
0.0000000000000000000000000000000000000000000000000000000000000000001585
234.0
View
LYD1_k127_5827756_6
-
-
-
-
0.00000000000008541
77.0
View
LYD1_k127_5827756_8
-
K04096
-
-
0.0001273
45.0
View
LYD1_k127_5828294_0
Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
K03695
-
-
0.0
1250.0
View
LYD1_k127_5828294_1
Fructose-bisphosphate aldolase class-II
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002503
610.0
View
LYD1_k127_5828294_2
ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
K03686
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007426
360.0
View
LYD1_k127_5828294_3
Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions
K21071
-
2.7.1.11,2.7.1.90
0.00000000000000000000000000000000001428
138.0
View
LYD1_k127_5828294_4
bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
K13640
GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141
-
0.0000000000000000000000000000006208
129.0
View
LYD1_k127_5828294_5
heat shock protein binding
-
-
-
0.00000000000000000006211
95.0
View
LYD1_k127_5828294_6
OsmC-like protein
K07397
-
-
0.00000000000001378
80.0
View
LYD1_k127_5861281_0
Belongs to the alpha-IPM synthase homocitrate synthase family
K01649
-
2.3.3.13
7.833e-213
671.0
View
LYD1_k127_5861281_1
AAA domain
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003325
454.0
View
LYD1_k127_5861281_2
CDP-alcohol phosphatidyltransferase
K17103
-
2.7.8.8
0.0000000000001108
72.0
View
LYD1_k127_5863453_0
COG0526, thiol-disulfide isomerase and thioredoxins
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002897
340.0
View
LYD1_k127_5863453_1
myo-inosose-2 dehydratase activity
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000006219
254.0
View
LYD1_k127_5863453_2
Putative regulatory protein
-
-
-
0.0000000000000000000000566
101.0
View
LYD1_k127_5863453_3
diguanylate cyclase
-
-
-
0.000000000000000005583
89.0
View
LYD1_k127_5886049_0
Involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space. It derives its energy for transport by interacting with the trans-periplasmic membrane protein TonB
K02014,K16092
-
-
0.00000000000000000000000000000009055
134.0
View
LYD1_k127_5886049_1
Seven times multi-haem cytochrome CxxCH
-
-
-
0.0000000000000001024
80.0
View
LYD1_k127_5886049_2
Belongs to the sulfur carrier protein TusA family
-
-
-
0.00000000008097
65.0
View
LYD1_k127_5886049_3
Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
K03832
-
-
0.000000004224
66.0
View
LYD1_k127_5886049_4
Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
K03981
-
5.3.4.1
0.0000000351
58.0
View
LYD1_k127_5886049_5
Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
K06039,K07235
GO:0002097,GO:0002098,GO:0002143,GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006790,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0019417,GO:0032991,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046483,GO:0055114,GO:0071704,GO:0090304,GO:0097163,GO:0140104,GO:1901360,GO:1902494,GO:1990228,GO:1990234
-
0.00000098
55.0
View
LYD1_k127_5886049_6
Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions
K07237
GO:0002097,GO:0002098,GO:0002143,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1902494,GO:1990228,GO:1990234
-
0.000003126
53.0
View
LYD1_k127_5916612_0
PFAM Tetratricopeptide TPR_1 repeat-containing protein
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003574
501.0
View
LYD1_k127_5916612_1
TIGRFAM cytochrome C family protein
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621
395.0
View
LYD1_k127_5916612_2
response regulator
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002656
349.0
View
LYD1_k127_5916612_3
Glycosyl transferase family group 2
K07011
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009536
318.0
View
LYD1_k127_5916612_4
glycosyl transferase family 2
K00786
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000257
250.0
View
LYD1_k127_5916612_5
Uncharacterized conserved protein (DUF2304)
-
-
-
0.0000000000000000001005
93.0
View
LYD1_k127_5916612_6
Response regulator receiver
-
-
-
0.000008985
56.0
View
LYD1_k127_5916612_7
Trypsin-like peptidase domain
-
-
-
0.00001162
59.0
View
LYD1_k127_6002338_0
Uncharacterized protein family (UPF0051)
K07033
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007768
346.0
View
LYD1_k127_6002338_1
RecF/RecN/SMC N terminal domain
K09013
-
-
0.00000000000000000000000000000000000000000000000002018
183.0
View
LYD1_k127_6002338_2
COG1595 DNA-directed RNA polymerase specialized sigma
K03088
-
-
0.0000000000000000000000000000000008614
137.0
View
LYD1_k127_6002338_3
Heavy-metal resistance
-
-
-
0.000000000000000000000000004076
116.0
View
LYD1_k127_6002338_4
amine dehydrogenase activity
K15864,K19345
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464
1.7.2.1,1.7.99.1
0.00000000000000000000000007349
120.0
View
LYD1_k127_6002338_5
Domain of unknown function (DUF4349)
-
-
-
0.000005224
55.0
View
LYD1_k127_6003115_0
Transport of potassium into the cell
K03549
GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015672,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0098655,GO:0098660,GO:0098662
-
3.198e-246
773.0
View
LYD1_k127_6003115_1
General secretory system II, protein E domain protein
K02652
-
-
2.353e-217
691.0
View
LYD1_k127_6003115_10
DNA topoisomerase type I activity
K03168
-
5.99.1.2
0.000000000000000000000000000000000000001783
151.0
View
LYD1_k127_6003115_11
Uncharacterised protein family UPF0102
K07460
-
-
0.0000000000000000000000000000904
119.0
View
LYD1_k127_6003115_2
FAD binding domain
K00278
-
1.4.3.16
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000294
625.0
View
LYD1_k127_6003115_3
3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
K12573
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002402
590.0
View
LYD1_k127_6003115_4
twitching motility protein
K02669
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008888
545.0
View
LYD1_k127_6003115_5
two component, sigma54 specific, transcriptional regulator, Fis family
K02667
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005595
475.0
View
LYD1_k127_6003115_6
Belongs to the LOG family
K06966
-
3.2.2.10
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002431
468.0
View
LYD1_k127_6003115_7
Type II secretion system (T2SS), protein F
K02653
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003514
378.0
View
LYD1_k127_6003115_8
His Kinase A (phosphoacceptor) domain
K02668
-
2.7.13.3
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004068
336.0
View
LYD1_k127_6003115_9
Type II secretion system (T2SS), protein E, N-terminal domain
-
-
-
0.000000000000000000000000000000000000000000000000004216
194.0
View
LYD1_k127_6004759_0
Bacterial type II and III secretion system protein
K02453,K03219
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002858
301.0
View
LYD1_k127_6004759_1
-
-
-
-
0.0000000000000006955
87.0
View
LYD1_k127_6004759_2
-
-
-
-
0.0000001297
59.0
View
LYD1_k127_6025263_0
Extracellular solute-binding protein
K02027
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292
571.0
View
LYD1_k127_6025263_1
Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import. Responsible for energy coupling to the transport system
K10112
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005316
452.0
View
LYD1_k127_6025263_2
Binding-protein-dependent transport system inner membrane component
K02025,K15771
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000252
299.0
View
LYD1_k127_6029083_0
Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
K03723
-
-
7.797e-216
705.0
View
LYD1_k127_6029083_1
Peptidase family M50
K11749
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005888
339.0
View
LYD1_k127_6029083_2
Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
-
-
-
0.000000000000000000000000000000000000000000000000000000000001605
213.0
View
LYD1_k127_6029083_3
Belongs to the Nudix hydrolase family
-
-
-
0.00000000000000000000000000000000003952
138.0
View
LYD1_k127_6029083_4
Thioesterase-like superfamily
K07107
-
-
0.0000000000000000000000000000002327
128.0
View
LYD1_k127_6053542_0
Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
K01711
-
4.2.1.47
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003335
593.0
View
LYD1_k127_6053542_1
PFAM membrane bound O-acyl transferase MBOAT
K19294
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000588
528.0
View
LYD1_k127_6053542_10
Protein of unknown function DUF86
-
-
-
0.00000000000000000000000000000000000000000000000000007936
189.0
View
LYD1_k127_6053542_11
SGNH hydrolase-like domain, acetyltransferase AlgX
-
-
-
0.00000000000000000000000000000000000000000000000001055
196.0
View
LYD1_k127_6053542_12
Protein of unknown function DUF86
-
-
-
0.000000000000000000000000000000006082
131.0
View
LYD1_k127_6053542_13
nucleotidyltransferase activity
K07076
-
-
0.000000000000000000000000000008882
124.0
View
LYD1_k127_6053542_14
PFAM DNA polymerase beta domain protein region
K07076
-
-
0.00000000000000000000133
100.0
View
LYD1_k127_6053542_2
Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
K01711
-
4.2.1.47
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001734
512.0
View
LYD1_k127_6053542_3
Glycosyl transferase, family 2
K16555
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001692
495.0
View
LYD1_k127_6053542_4
Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction
K02377
-
1.1.1.271
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088
473.0
View
LYD1_k127_6053542_5
transferase activity, transferring glycosyl groups
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049
462.0
View
LYD1_k127_6053542_6
transferase activity, transferring glycosyl groups
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295
461.0
View
LYD1_k127_6053542_7
Glycosyltransferase WbsX
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002326
410.0
View
LYD1_k127_6053542_8
Mannose-6-phosphate isomerase, type
K16011
-
2.7.7.13,5.3.1.8
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004356
403.0
View
LYD1_k127_6053542_9
Glycosyltransferase like family
K20444
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002702
362.0
View
LYD1_k127_6183708_0
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL CutL-like protein
K07303
-
1.3.99.16
2.44e-250
793.0
View
LYD1_k127_6183708_1
reductase, alpha subunit
K00394
-
1.8.99.2
4.603e-247
769.0
View
LYD1_k127_6183708_10
Protein of unknown function (DUF1499)
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000004722
230.0
View
LYD1_k127_6183708_11
reductase, beta subunit
K00395
-
1.8.99.2
0.00000000000000000000000000000000000000000000000000000000000000009973
224.0
View
LYD1_k127_6183708_12
HD domain
K06950
-
-
0.00000000000000000000000000000000000000000000000000002076
195.0
View
LYD1_k127_6183708_13
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
K07141
-
2.7.7.76
0.0000000000000000000000000000000000000000000000001719
183.0
View
LYD1_k127_6183708_14
Involved in molybdopterin and thiamine biosynthesis, family 2
K21029
-
2.7.7.80
0.000000000000000000000000000000000005038
139.0
View
LYD1_k127_6183708_2
Belongs to the sulfate adenylyltransferase family
K00958,K13811
-
2.7.1.25,2.7.7.4
9.149e-205
643.0
View
LYD1_k127_6183708_3
Mechanosensitive ion channel
K03442
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004389
404.0
View
LYD1_k127_6183708_4
dienelactone hydrolase
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002153
345.0
View
LYD1_k127_6183708_5
PFAM DNA alkylation repair enzyme
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000042
282.0
View
LYD1_k127_6183708_6
Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
K07402
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000009255
245.0
View
LYD1_k127_6183708_7
[2Fe-2S] binding domain
K07302
-
1.3.99.16
0.0000000000000000000000000000000000000000000000000000000000000000004107
232.0
View
LYD1_k127_6183708_8
Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
K02428
GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576
3.6.1.66
0.00000000000000000000000000000000000000000000000000000000000000001776
229.0
View
LYD1_k127_6183708_9
Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
K06173
-
5.4.99.12
0.00000000000000000000000000000000000000000000000000000000000000001936
232.0
View
LYD1_k127_6193657_0
Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
K02355
-
-
0.0
1112.0
View
LYD1_k127_6193657_1
This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
K02358
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464
-
0.0000000000000000000000000000000000000000000000000000000000000000000001134
239.0
View
LYD1_k127_6201612_0
Protein involved in outer membrane biogenesis
-
-
-
1.02e-289
929.0
View
LYD1_k127_6201612_1
Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
K03282
GO:0003674,GO:0005215,GO:0005216,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015075,GO:0015267,GO:0015318,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022838,GO:0022857,GO:0030104,GO:0031224,GO:0031226,GO:0032535,GO:0034220,GO:0042592,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0090066
-
0.000000000000001175
77.0
View
LYD1_k127_6201612_3
Protein of unknown function (DUF4197)
-
-
-
0.00002191
47.0
View
LYD1_k127_621081_0
Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
K03601
-
3.1.11.6
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006813
381.0
View
LYD1_k127_621081_1
PAS domain
K13924
-
2.1.1.80,3.1.1.61
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002536
334.0
View
LYD1_k127_621081_2
Evidence 4 Homologs of previously reported genes of
-
-
-
0.0000000000000000000000000000000000000000000003467
176.0
View
LYD1_k127_621081_3
Putative zinc- or iron-chelating domain
-
-
-
0.0000000000000000001323
93.0
View
LYD1_k127_621081_4
exodeoxyribonuclease VII activity
K03602
-
3.1.11.6
0.000000000031
66.0
View
LYD1_k127_6240385_0
Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
K00962
-
2.7.7.8
2.257e-286
894.0
View
LYD1_k127_6240385_1
Dehydratase family
K01687
-
4.2.1.9
7.76e-265
824.0
View
LYD1_k127_6240385_2
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004511
427.0
View
LYD1_k127_6240385_3
Belongs to the peptidase M16 family
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004612
381.0
View
LYD1_k127_6240385_4
PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
K03767,K03768
-
5.2.1.8
0.0000000000000000000000000000000000000000000000000000000000000001587
222.0
View
LYD1_k127_6240385_5
Protein of Unknown function (DUF2784)
-
-
-
0.00000000000000000000000000000000004971
138.0
View
LYD1_k127_6240385_6
Ribosomal_S15
K02956
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904
-
0.00000000000000000000000000000001177
128.0
View
LYD1_k127_6240385_7
Protein of unknown function (DUF465)
K09794
-
-
0.0000000000000000001223
90.0
View
LYD1_k127_6256897_0
Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
K00215
-
1.17.1.8
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001658
301.0
View
LYD1_k127_6256897_1
LysM domain
K01449,K19223
-
3.5.1.28
0.00000000000000000000000000000000000000000000000000000000000000000000004407
256.0
View
LYD1_k127_6256897_2
DegT/DnrJ/EryC1/StrS aminotransferase family
-
-
-
0.000000000000000000000000000000000000000000000000000000000000001104
233.0
View
LYD1_k127_6256897_3
Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
K06024
-
-
0.000000000000000000000000000000000000000000000000004271
186.0
View
LYD1_k127_6256897_4
Important for reducing fluoride concentration in the cell, thus reducing its toxicity
K06199
-
-
0.00000000000000000000000000000001501
130.0
View
LYD1_k127_6256897_5
PFAM LemA family protein
K03744
-
-
0.0000000000000000000000000006228
114.0
View
LYD1_k127_6256897_6
PFAM Rubredoxin-type Fe(Cys)4 protein
-
GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016491,GO:0017144,GO:0022900,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0055114,GO:0072592
-
0.000000000000000000000001011
104.0
View
LYD1_k127_6256897_7
acr, cog1993
K09137
-
-
0.0000000000000000000001323
100.0
View
LYD1_k127_6267404_0
Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
K01874
-
6.1.1.10
4.666e-253
795.0
View
LYD1_k127_6267404_1
ATPase BadF BadG BcrA BcrD type
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003112
422.0
View
LYD1_k127_6267404_2
Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
K00549
-
2.1.1.14
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005653
306.0
View
LYD1_k127_6267404_3
PSP1 C-terminal conserved region
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000001824
254.0
View
LYD1_k127_6267404_4
DNA polymerase III, delta subunit
K02341
-
2.7.7.7
0.0000000000000000000000000000000000000000000000000000000001221
216.0
View
LYD1_k127_6267404_5
Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
K00943
GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
2.7.4.9
0.000000000000000000000000000000000000000000000000004357
190.0
View
LYD1_k127_6268960_0
Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
K01255
-
3.4.11.1
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002435
402.0
View
LYD1_k127_6268960_1
AAA domain, putative AbiEii toxin, Type IV TA system
K01990,K09695
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005499
352.0
View
LYD1_k127_6268960_10
Histidine kinase-like ATPase domain
K04757
-
2.7.11.1
0.000000000000000000000000001017
117.0
View
LYD1_k127_6268960_11
antisigma factor binding
K04749,K05946,K06378
-
2.4.1.187
0.00000000000000009318
83.0
View
LYD1_k127_6268960_12
PFAM Mammalian cell entry related
K02067
-
-
0.0000000000000004315
89.0
View
LYD1_k127_6268960_13
PFAM EAL domain, GGDEF domain
-
-
-
0.0000000000000817
73.0
View
LYD1_k127_6268960_14
ABC-type transport auxiliary lipoprotein component
K18480
-
-
0.0000608
53.0
View
LYD1_k127_6268960_2
ABC-2 type transporter
K09694
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706
336.0
View
LYD1_k127_6268960_3
ABC-type transport system involved in resistance to organic solvents, ATPase component
K02065
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002812
324.0
View
LYD1_k127_6268960_4
PLD-like domain
K06131
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000006752
276.0
View
LYD1_k127_6268960_5
ABC-type transport system involved in resistance to organic solvents permease component
K02066
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000004366
261.0
View
LYD1_k127_6268960_6
chlorophyll binding
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000001526
248.0
View
LYD1_k127_6268960_7
Protein phosphatase 2C domain
K07315
-
3.1.3.3
0.000000000000000000000000000000000000000000000000000000000000000000002792
252.0
View
LYD1_k127_6268960_8
Zinc dependent phospholipase C
-
-
-
0.0000000000000000000000000000000000000000000000000001438
198.0
View
LYD1_k127_6268960_9
SPTR Lysine exporter protein (LYSE YGGA)
-
-
-
0.00000000000000000000000000000000000000000000006058
176.0
View
LYD1_k127_6274641_0
Ion channel
K10716
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000001127
284.0
View
LYD1_k127_6274641_1
Vitamin K epoxide reductase family
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000002013
252.0
View
LYD1_k127_6274641_2
HD domain
-
-
-
0.0000000000000000000000000000000000000000000007799
171.0
View
LYD1_k127_6274641_3
Protein of unknown function (DUF4019)
-
-
-
0.00000000000000000000000000000000000006802
151.0
View
LYD1_k127_6274641_4
Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
K03723
-
-
0.0000000004025
65.0
View
LYD1_k127_6289679_0
FAD linked oxidase
-
-
-
2.626e-255
792.0
View
LYD1_k127_6289679_1
Participates in initiation and elongation during chromosome replication
K02314
-
3.6.4.12
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006917
571.0
View
LYD1_k127_6289679_2
Belongs to the MEMO1 family
K06990
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001063
285.0
View
LYD1_k127_6289679_3
Binds to the 23S rRNA
K02939
GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.000000000000000000000000000000000000000001143
160.0
View
LYD1_k127_6289679_4
DsrE/DsrF/DrsH-like family
-
-
-
0.000000006705
57.0
View
LYD1_k127_6301987_0
DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
K03581
-
3.1.11.5
1.38e-222
701.0
View
LYD1_k127_630834_0
Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
K03086
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248
579.0
View
LYD1_k127_630834_1
protein kinase activity
-
-
-
0.000000000000000000000000001326
121.0
View
LYD1_k127_630834_2
Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
K03086
-
-
0.00000003092
56.0
View
LYD1_k127_6314548_0
sugar transferase
K00996
-
2.7.8.6
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002093
391.0
View
LYD1_k127_6314548_1
transferase activity, transferring glycosyl groups
K00745,K12988,K18704
-
2.4.1.166,2.7.8.14,2.7.8.47
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285
309.0
View
LYD1_k127_6314548_2
Methyltransferase domain
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000008773
259.0
View
LYD1_k127_6314548_3
TIGRFAM phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
K01814
GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
5.3.1.16
0.00000000000000000000000000000000000000000000000000000000000000000001182
241.0
View
LYD1_k127_6314548_4
Protein of unknown function (DUF3108)
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000006745
233.0
View
LYD1_k127_6314548_5
Glycosyl transferase, family 2
-
-
-
0.00000000000000000000000000000000000000000000000000000000000008254
226.0
View
LYD1_k127_6314548_6
Methyltransferase domain
-
-
-
0.000000000000000000000000000000000000000000000000000000005023
207.0
View
LYD1_k127_6315262_0
Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
K01876
-
6.1.1.12
1.946e-261
818.0
View
LYD1_k127_6315262_1
Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
K00036
-
1.1.1.363,1.1.1.49
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009241
509.0
View
LYD1_k127_6315262_2
PFAM Fatty acid hydroxylase
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079
321.0
View
LYD1_k127_6315262_3
Belongs to the pseudouridine synthase RsuA family
K06178
-
5.4.99.22
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001349
316.0
View
LYD1_k127_6315262_4
AI-2E family transporter
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000005796
258.0
View
LYD1_k127_6315262_5
PFAM Glycosyl transferase family 2
K09931
-
-
0.00000000000000000000000000000000000000000000000000002909
196.0
View
LYD1_k127_6315262_6
Uncharacterized protein conserved in bacteria (DUF2064)
K09931,K20742
-
3.4.14.13
0.000000000000000000000000000000000000000003077
165.0
View
LYD1_k127_6315262_7
cyclic nucleotide binding
K10914
-
-
0.00000000000000000000000000000000000002634
151.0
View
LYD1_k127_6315262_8
Prokaryotic dksA/traR C4-type zinc finger
K06204
-
-
0.00000000000000002503
88.0
View
LYD1_k127_6315262_9
Responsible for synthesis of pseudouridine from uracil
K06180
-
5.4.99.23
0.0000000000000005932
79.0
View
LYD1_k127_6322361_0
PFAM NADPH-dependent FMN reductase
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008931
285.0
View
LYD1_k127_6322361_1
Involved in the biosynthesis of porphyrin-containing compound
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000008981
271.0
View
LYD1_k127_6322361_2
Belongs to the UPF0301 (AlgH) family
K07735
-
-
0.00000000000000000000000000000000000000000002951
166.0
View
LYD1_k127_6326660_0
Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
K00058
-
1.1.1.399,1.1.1.95
2.8e-228
717.0
View
LYD1_k127_6326660_1
Evidence 2b Function of strongly homologous gene
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254
542.0
View
LYD1_k127_6326660_10
Tetratricopeptide repeat protein
-
-
-
0.0002198
51.0
View
LYD1_k127_6326660_2
Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
K01939
GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
6.3.4.4
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005079
526.0
View
LYD1_k127_6326660_3
Evidence 2a Function of homologous gene experimentally demonstrated in an other organism
K04771
-
3.4.21.107
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001353
522.0
View
LYD1_k127_6326660_4
Lysin motif
K08307
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002101
367.0
View
LYD1_k127_6326660_5
zinc ion binding
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000002037
271.0
View
LYD1_k127_6326660_6
Protein of unknown function, DUF488
-
-
-
0.000000000000000000000000000000000000000000779
162.0
View
LYD1_k127_6326660_7
Phosphoribosyl transferase domain
-
-
-
0.0000000000000000000000000000000000000003516
158.0
View
LYD1_k127_6326660_8
Protein tyrosine kinase
K12132
-
2.7.11.1
0.000000000000000000002283
98.0
View
LYD1_k127_6326660_9
DNA-damage-inducible protein d
K14623
-
-
0.000000000007779
66.0
View
LYD1_k127_6398034_0
Domains GAF, HisKA, HATPase_c, GAF, HD-GYP-related
-
-
-
4.739e-278
874.0
View
LYD1_k127_6398034_1
PEP-CTERM motif
-
-
-
0.000000000000000000000000000000000000000000000000000000000001306
220.0
View
LYD1_k127_6398034_2
Domain present in phytochromes and cGMP-specific phosphodiesterases.
-
-
-
0.00000000000000000000000000000000000000000000000000000002607
205.0
View
LYD1_k127_6398034_3
Belongs to the peptidase S8 family
-
-
-
0.0000000000000000000000000000000000000000000000000000003424
199.0
View
LYD1_k127_6398034_4
-
-
-
-
0.000000000000000000000000000000000000000000000000004137
186.0
View
LYD1_k127_6424886_0
Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
K02111
-
3.6.3.14
1.133e-242
757.0
View
LYD1_k127_6424886_1
Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
K02115
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003763
292.0
View
LYD1_k127_6424886_2
F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
K02113
-
-
0.000000000000000000000000000000000000000006324
160.0
View
LYD1_k127_6424886_3
ATP synthesis coupled proton transport
K02109,K18682
GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045263,GO:0045264,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600
-
0.000000000002142
68.0
View
LYD1_k127_6479778_0
Part of a membrane complex involved in electron transport
K03614
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009931
353.0
View
LYD1_k127_6479778_1
electron transport complex, RnfABCDGE type, B subunit
K03616
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009196
292.0
View
LYD1_k127_6479778_2
Part of a membrane complex involved in electron transport
K03617
-
-
0.000000000000000000000000000000000000000000000000000000000000000006904
230.0
View
LYD1_k127_6479778_3
Part of a membrane complex involved in electron transport
K03613
-
-
0.0000000000000000000000000000000000000000000000000000001024
203.0
View
LYD1_k127_6479778_4
Part of a membrane complex involved in electron transport
K03612
-
-
0.000000000000000000000000388
113.0
View
LYD1_k127_6496926_0
Family 5
K02035,K15580
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633
370.0
View
LYD1_k127_6496926_1
ABC-type dipeptide oligopeptide nickel transport systems, permease components
K02033,K15581
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000003313
277.0
View
LYD1_k127_6496926_2
COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
K02034
-
-
0.0000000000000000000000000000000000000000000000000000000000000000008455
236.0
View
LYD1_k127_6496926_3
PFAM iron dependent repressor
K03709
-
-
0.00000000000000000000000000000000000000000000000001112
184.0
View
LYD1_k127_6496926_4
peptidyl-tyrosine sulfation
-
-
-
0.00000000000000000000000000000472
124.0
View
LYD1_k127_6496926_5
AI-2E family transporter
-
-
-
0.000000145
54.0
View
LYD1_k127_6501376_0
Sigma-54 interaction domain
K07714
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007156
562.0
View
LYD1_k127_6501376_1
Histidine kinase
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004147
445.0
View
LYD1_k127_6501376_10
Response regulator receiver domain
K03413
-
-
0.000000000000000000000000000000000000000000009215
165.0
View
LYD1_k127_6501376_11
thiolester hydrolase activity
-
-
-
0.00000000000000000000000000002351
122.0
View
LYD1_k127_6501376_12
Two component signalling adaptor domain
K03408
-
-
0.0000000000000000000000000001333
120.0
View
LYD1_k127_6501376_13
PFAM CheW domain protein
K03408
-
-
0.000000000000000000003444
102.0
View
LYD1_k127_6501376_2
Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
K00575
-
2.1.1.80
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004716
360.0
View
LYD1_k127_6501376_3
Signal transducing histidine kinase homodimeric
K03407
-
2.7.13.3
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004349
331.0
View
LYD1_k127_6501376_4
catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR
K03412
-
3.1.1.61,3.5.1.44
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127
317.0
View
LYD1_k127_6501376_5
Domain present in phytochromes and cGMP-specific phosphodiesterases.
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184
305.0
View
LYD1_k127_6501376_6
histidine kinase HAMP region domain protein
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001517
328.0
View
LYD1_k127_6501376_7
Pfam:Arch_ATPase
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001515
288.0
View
LYD1_k127_6501376_8
HEAT repeat
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000002029
277.0
View
LYD1_k127_6501376_9
Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
K03406
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000004357
274.0
View
LYD1_k127_6514335_0
Belongs to the glycosyl hydrolase 57 family
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008616
396.0
View
LYD1_k127_6514335_1
PFAM GCN5-related N-acetyltransferase
K03824
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005394
308.0
View
LYD1_k127_6514335_2
COG0564 Pseudouridylate synthases, 23S RNA-specific
K06177
-
5.4.99.28,5.4.99.29
0.000000000000000000000000000000000000000000000000000000000000000000000000000008563
268.0
View
LYD1_k127_6514335_3
Smr domain
-
-
-
0.00000000000000000000000000002005
119.0
View
LYD1_k127_6514335_4
Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
K04078
GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077
-
0.000000000000000002275
95.0
View
LYD1_k127_6540889_0
Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
K01733
-
4.2.3.1
4.258e-200
632.0
View
LYD1_k127_6540889_1
Calcineurin-like phosphoesterase
K07098
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002942
394.0
View
LYD1_k127_6540889_2
PFAM Cys Met metabolism pyridoxal-phosphate-dependent
K01739
-
2.5.1.48
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003827
374.0
View
LYD1_k127_6540889_3
PFAM Glyoxalase bleomycin resistance protein dioxygenase
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002023
289.0
View
LYD1_k127_6540889_4
Calcineurin-like phosphoesterase
K07096
-
-
0.0000000000000000000000000000000000000000001431
166.0
View
LYD1_k127_6540889_6
PFAM Transglycosylase-associated protein
-
-
-
0.00000000257
61.0
View
LYD1_k127_6540889_7
Calcineurin-like phosphoesterase
K07098
-
-
0.0002405
44.0
View
LYD1_k127_6555222_0
-
K07112
GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944
-
0.000000000000000000000000000000000000000000000000000003065
205.0
View
LYD1_k127_6555222_1
Collagen triple helix repeat (20 copies)
-
-
-
0.000000000000000000000000005935
119.0
View
LYD1_k127_6555222_2
Cytochrome c
K08738
-
-
0.00000000000000000000004105
103.0
View
LYD1_k127_6555222_3
COG0589 Universal stress protein UspA and related nucleotide-binding proteins
-
-
-
0.00000000783
64.0
View
LYD1_k127_6600949_0
Responsible for synthesis of pseudouridine from uracil
K06180
-
5.4.99.23
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135
299.0
View
LYD1_k127_6600949_1
Acetyltransferase (GNAT) domain
K00663
-
2.3.1.82
0.00003376
53.0
View
LYD1_k127_6609137_0
PFAM Respiratory-chain NADH dehydrogenase domain 51 kDa subunit
K00335
-
1.6.5.3
3.976e-243
764.0
View
LYD1_k127_6609137_1
Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
K00123
-
1.17.1.9
9.725e-198
629.0
View
LYD1_k127_6609137_2
molybdopterin oxidoreductase Fe4S4 region
K05299
-
1.17.1.10
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003336
481.0
View
LYD1_k127_6609137_3
Mo-molybdopterin cofactor metabolic process
K02379
-
-
0.000000000000000000000000000000000000000000000000000000000000000001391
235.0
View
LYD1_k127_6609137_4
Thioredoxin-like [2Fe-2S] ferredoxin
K00334
-
1.6.5.3
0.00000000000000000000000000000000000000000001509
166.0
View
LYD1_k127_6609137_5
Protein of unknown function (DUF1573)
-
-
-
0.0000000000003281
78.0
View
LYD1_k127_6609137_6
-
-
-
-
0.0003688
44.0
View
LYD1_k127_6617681_0
Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
K00266
-
1.4.1.13,1.4.1.14
0.0
1084.0
View
LYD1_k127_6617681_1
Conserved region in glutamate synthase
K00265
-
1.4.1.13,1.4.1.14
2.541e-307
951.0
View
LYD1_k127_6617681_2
PFAM Glutamine amidotransferase, class-II
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003919
293.0
View
LYD1_k127_6617681_3
cyclic nucleotide binding
K00384,K01420
-
1.8.1.9
0.00000000000000000000000000000004846
127.0
View
LYD1_k127_6617681_4
Adenylyl- / guanylyl cyclase, catalytic domain
K01768
-
4.6.1.1
0.000000000000000000002817
98.0
View
LYD1_k127_6702161_0
Surface antigen
K07277
-
-
2.979e-261
827.0
View
LYD1_k127_6702161_1
Nitrite and sulphite reductase 4Fe-4S
K11180
-
1.8.99.5
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000686
582.0
View
LYD1_k127_6702161_10
12 heme-binding sites
-
-
-
0.0000000000000000000000000000000000001146
151.0
View
LYD1_k127_6702161_11
lyase activity
-
-
-
0.00000000000000000000000000161
121.0
View
LYD1_k127_6702161_12
PFAM outer membrane chaperone Skp (OmpH)
K06142
-
-
0.0000000000000000000004758
102.0
View
LYD1_k127_6702161_13
lyase activity
-
-
-
0.000000000000000001023
89.0
View
LYD1_k127_6702161_14
4Fe-4S ferredoxin iron-sulfur binding domain protein
-
-
-
0.00000189
50.0
View
LYD1_k127_6702161_2
Nitrite and sulphite reductase 4Fe-4S
K11181
-
1.8.99.5
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003807
550.0
View
LYD1_k127_6702161_3
Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source
K02224
-
6.3.5.11,6.3.5.9
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003005
539.0
View
LYD1_k127_6702161_4
Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
K02536
-
2.3.1.191
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005659
391.0
View
LYD1_k127_6702161_5
Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
K00677
-
2.3.1.129
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219
362.0
View
LYD1_k127_6702161_6
Protein of unknown function (DUF1009)
K09949
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000005035
256.0
View
LYD1_k127_6702161_7
Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
K02372
-
4.2.1.59
0.0000000000000000000000000000000000000000000000000000000004117
205.0
View
LYD1_k127_6702161_8
denitrification pathway
-
-
-
0.0000000000000000000000000000000000000000000000002966
185.0
View
LYD1_k127_6702161_9
denitrification pathway
-
-
-
0.00000000000000000000000000000000000000153
159.0
View
LYD1_k127_6711040_0
Sodium/hydrogen exchanger family
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001409
573.0
View
LYD1_k127_6711040_1
Thioredoxin-like [2Fe-2S] ferredoxin
K00334
-
1.6.5.3
0.0000000000000000000000000000000000000000001001
164.0
View
LYD1_k127_6711040_2
Domain in cystathionine beta-synthase and other proteins.
-
-
-
0.00000000000000000000000000008979
121.0
View
LYD1_k127_6737154_0
Major Facilitator Superfamily
K08223
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000174
491.0
View
LYD1_k127_6737154_1
This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
K03572
GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234
339.0
View
LYD1_k127_6737154_2
Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
K00791
GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360
2.5.1.75
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004249
318.0
View
LYD1_k127_6737154_3
Dimerisation domain
-
-
-
0.000000000000000000000000000000000000000000000000000000000000002781
230.0
View
LYD1_k127_6737154_4
Belongs to the Nudix hydrolase family
K03574
-
3.6.1.55
0.0000000000000000000000000000000000000000000000001346
179.0
View
LYD1_k127_6737154_5
SurA N-terminal domain
K03770
-
5.2.1.8
0.00000000000000000000000000000001454
135.0
View
LYD1_k127_6737154_6
RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs
K03666
GO:0003674,GO:0003676,GO:0003677,GO:0003681,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006378,GO:0006396,GO:0006397,GO:0006417,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0016246,GO:0016441,GO:0016458,GO:0017148,GO:0019222,GO:0022607,GO:0022613,GO:0022618,GO:0030423,GO:0031047,GO:0031123,GO:0031124,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032268,GO:0032269,GO:0032270,GO:0034248,GO:0034249,GO:0034250,GO:0034622,GO:0034641,GO:0035194,GO:0040029,GO:0040033,GO:0043170,GO:0043631,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0045727,GO:0045974,GO:0045975,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051246,GO:0051247,GO:0051248,GO:0060255,GO:0065003,GO:0065007,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:2000112,GO:2000113
-
0.000000000000000000004043
94.0
View
LYD1_k127_6737154_7
Cysteine-rich small domain
K07162
-
-
0.000000000000000009357
86.0
View
LYD1_k127_6787578_0
Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
K00790
-
2.5.1.7
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402
528.0
View
LYD1_k127_6787578_1
Amino acid permease
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002667
460.0
View
LYD1_k127_6787578_10
PAS domain containing protein
K03406,K13924,K14986
-
2.1.1.80,2.7.13.3,3.1.1.61
0.00000000000000008104
87.0
View
LYD1_k127_6787578_2
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004846
448.0
View
LYD1_k127_6787578_3
Histidine kinase
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001531
309.0
View
LYD1_k127_6787578_4
His Kinase A (phosphoacceptor) domain
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000001438
267.0
View
LYD1_k127_6787578_5
DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
K10773
-
4.2.99.18
0.000000000000000000000000000000000000000000000000000000000000000000000002195
253.0
View
LYD1_k127_6787578_6
cheY-homologous receiver domain
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000009467
224.0
View
LYD1_k127_6787578_7
PBP superfamily domain
K02040
-
-
0.00000000000000000000000000000000000000000000000000000000001336
216.0
View
LYD1_k127_6787578_8
Sigma factor PP2C-like phosphatases
-
-
-
0.00000000000000000000000000000000000009748
158.0
View
LYD1_k127_6787578_9
diguanylate cyclase
-
-
-
0.00000000000000000000000000000001121
146.0
View
LYD1_k127_680395_0
Transmembrane secretion effector
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003029
327.0
View
LYD1_k127_680395_1
ABC transporter
K09817
-
-
0.00000000000000000000000000000000000000000000000000000000000000000007474
241.0
View
LYD1_k127_680395_2
PFAM periplasmic solute binding protein
K09815
-
-
0.00000000000000000000000000000000000000000000000000000000000000008534
232.0
View
LYD1_k127_680395_3
ABC 3 transport family
K09816,K09819
-
-
0.000000000000000000000000000000000000000000000000000000001486
209.0
View
LYD1_k127_680395_4
Glycoprotease family
K01409,K14742
GO:0002949,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140096,GO:1901360,GO:1901564
2.3.1.234
0.000000000000000000000000000000000000000000000000001623
192.0
View
LYD1_k127_680395_5
Domain of unknown function (DUF1992)
-
-
-
0.0000000000000000000000000000000004626
133.0
View
LYD1_k127_680395_6
This enzyme acetylates the N-terminal alanine of ribosomal protein S18
K03789
-
2.3.1.128
0.0000000000000000000000000000005678
128.0
View
LYD1_k127_692716_0
Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
K03168
-
5.99.1.2
1.261e-262
829.0
View
LYD1_k127_692716_1
Penicillin-binding protein OB-like domain
K05366
-
2.4.1.129,3.4.16.4
2.892e-243
773.0
View
LYD1_k127_692716_10
TIGRFAM diguanylate cyclase
-
-
-
0.0000000000000000000000000000000000002934
159.0
View
LYD1_k127_692716_11
Belongs to the Fur family
K03711
-
-
0.00000000000000000000000000000000001184
139.0
View
LYD1_k127_692716_12
Transcriptional regulator, MerR family
-
-
-
0.0000000000000000000000000000000001958
137.0
View
LYD1_k127_692716_13
Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
K03981
-
5.3.4.1
0.00000000000000000000000000000009998
126.0
View
LYD1_k127_692716_14
isomerase activity
K01821
-
5.3.2.6
0.0000000000000000000000001572
109.0
View
LYD1_k127_692716_15
F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
K02110
GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600
-
0.000000000000000000002821
97.0
View
LYD1_k127_692716_18
PFAM GAF domain
-
-
-
0.0000000001539
62.0
View
LYD1_k127_692716_19
Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
K03981
-
5.3.4.1
0.000000000267
62.0
View
LYD1_k127_692716_2
Belongs to the argininosuccinate synthase family. Type 1 subfamily
K01940
-
6.3.4.5
3.278e-196
617.0
View
LYD1_k127_692716_21
His Kinase A (phosphoacceptor) domain
-
-
-
0.0008696
50.0
View
LYD1_k127_692716_3
transporter of a GTP-driven Fe(2 ) uptake system
K04759
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001192
602.0
View
LYD1_k127_692716_4
Cytochrome c7 and related cytochrome c
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001985
377.0
View
LYD1_k127_692716_5
DNA recombination-mediator protein A
K03168,K04096
-
5.99.1.2
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079
320.0
View
LYD1_k127_692716_6
Cytochrome c7 and related cytochrome c
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000005235
259.0
View
LYD1_k127_692716_7
MOSC domain
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000001674
245.0
View
LYD1_k127_692716_8
it plays a direct role in the translocation of protons across the membrane
K02108
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000002958
244.0
View
LYD1_k127_692716_9
HNH nucleases
-
-
-
0.00000000000000000000000000000000000000000000001171
174.0
View
LYD1_k127_697408_0
ATPase, P-type (transporting), HAD superfamily, subfamily IC
K01537,K01539
-
3.6.3.8,3.6.3.9
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003802
530.0
View
LYD1_k127_697408_1
Flavin containing amine oxidoreductase
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000565
407.0
View
LYD1_k127_697408_2
AMP binding
K09118,K13693
-
2.4.1.266
0.000000000000000000000000004506
121.0
View
LYD1_k127_697408_3
Zincin-like metallopeptidase
-
-
-
0.0000000000000000000007497
99.0
View
LYD1_k127_697408_4
-
-
-
-
0.00000000004707
76.0
View
LYD1_k127_697408_5
NUDIX domain
-
-
-
0.00000005923
55.0
View
LYD1_k127_697408_6
Two component transcriptional regulator, winged helix family
K07667
-
-
0.00004313
48.0
View
LYD1_k127_698005_0
Belongs to the peptidase M16 family
K07263
-
-
5e-324
1015.0
View
LYD1_k127_698005_1
TIGRFAM ATP-dependent helicase HrpB
K03579
-
3.6.4.13
2.111e-288
908.0
View
LYD1_k127_698005_10
One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
K02519
-
-
0.00000000000000000000000000000000000000000000000000000000000002627
222.0
View
LYD1_k127_698005_11
heat shock protein binding
-
-
-
0.0000000000000000000000000000000000000000000000000000000000003008
223.0
View
LYD1_k127_698005_12
Aminoacyl-tRNA editing domain
K19055
-
-
0.000000000000000000000000000000000000000000000000008478
185.0
View
LYD1_k127_698005_13
organic phosphonate transport
K02044
-
-
0.0000000000000000000000000000000000000008129
160.0
View
LYD1_k127_698005_14
SWI complex, BAF60b domains
-
-
-
0.000000000000000000000000000000002754
133.0
View
LYD1_k127_698005_15
PFAM Rieske 2Fe-2S
K02636
-
1.10.9.1
0.000000000000000000000000000077
120.0
View
LYD1_k127_698005_16
Domain of unknown function (DUF4203)
-
-
-
0.0000000000000000000000000000866
121.0
View
LYD1_k127_698005_17
-
-
-
-
0.00000000000000000000000004587
112.0
View
LYD1_k127_698005_18
Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
-
-
-
0.0000000000000542
81.0
View
LYD1_k127_698005_19
-
-
-
-
0.00000000008027
65.0
View
LYD1_k127_698005_2
UvrD-like helicase C-terminal domain
K03656,K03657
-
3.6.4.12
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002128
610.0
View
LYD1_k127_698005_20
-
K07092
-
-
0.00008467
50.0
View
LYD1_k127_698005_3
Belongs to the DEAD box helicase family
K05592
-
3.6.4.13
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006522
526.0
View
LYD1_k127_698005_4
PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase
K00382
-
1.8.1.4
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003311
421.0
View
LYD1_k127_698005_5
Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
K00412
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001908
388.0
View
LYD1_k127_698005_6
Metallo-beta-lactamase superfamily
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007105
333.0
View
LYD1_k127_698005_7
Sigma-54 interaction domain
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002835
319.0
View
LYD1_k127_698005_8
Enoyl-(Acyl carrier protein) reductase
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000005957
267.0
View
LYD1_k127_698005_9
Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
K01807
-
5.3.1.6
0.000000000000000000000000000000000000000000000000000000000000001775
227.0
View
LYD1_k127_724955_0
Chromate transporter
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002837
487.0
View
LYD1_k127_724955_1
PFAM Major Facilitator Superfamily
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002932
387.0
View
LYD1_k127_724955_2
Uncharacterized protein containing a ferredoxin domain (DUF2148)
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000002119
265.0
View
LYD1_k127_724955_3
Chromate resistance exported protein
-
-
-
0.0000000000000000000000000000000000000000000000000000000000001573
224.0
View
LYD1_k127_726130_0
Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
K04744
-
-
0.00000000000000000000000000000000000000000000000000000000000005857
237.0
View
LYD1_k127_726130_1
Mur ligase, middle domain protein
K11754
-
6.3.2.12,6.3.2.17
0.0000000005274
63.0
View
LYD1_k127_735618_0
Probable RNA and SrmB- binding site of polymerase A
K00974
-
2.7.7.72
2.457e-272
863.0
View
LYD1_k127_735618_1
Cytochrome b5-like Heme/Steroid binding domain
K07245,K14166
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000153
298.0
View
LYD1_k127_735618_2
diguanylate cyclase
K02488
-
2.7.7.65
0.00000000000000000000000000000000000000000000000000000000000000000000000000000006867
284.0
View
LYD1_k127_735618_3
PFAM ATP-grasp domain
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000003064
233.0
View
LYD1_k127_735618_4
Domain of unknown function (DUF3842)
-
-
-
0.0000000000000000000000000000000000000000000000003183
179.0
View
LYD1_k127_735618_5
protein tyrosine phosphatase activity
K01104
-
3.1.3.48
0.00000000000000000000000000000000000000000001471
169.0
View
LYD1_k127_735618_6
helix_turn_helix, Lux Regulon
-
-
-
0.0000001373
60.0
View
LYD1_k127_741152_0
Ftsk_gamma
K03466
-
-
5.811e-205
660.0
View
LYD1_k127_741152_1
An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
K12574
-
-
3.008e-201
642.0
View
LYD1_k127_741152_10
PFAM Sulfate transporter antisigma-factor antagonist STAS
-
-
-
0.0000000001872
66.0
View
LYD1_k127_741152_2
Aminotransferase class-III
K00821
-
2.6.1.11,2.6.1.17
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152
513.0
View
LYD1_k127_741152_3
Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
K01409
GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360
2.3.1.234
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003637
385.0
View
LYD1_k127_741152_4
Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
K00611
-
2.1.3.3
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179
370.0
View
LYD1_k127_741152_5
Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP)
K06153
-
3.6.1.27
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005932
280.0
View
LYD1_k127_741152_6
HD domain
-
-
-
0.0000000000000000000000000000000000000000000001091
183.0
View
LYD1_k127_741152_7
Outer membrane lipoprotein carrier protein LolA
K03634
-
-
0.00000000000000000000000000000000001053
146.0
View
LYD1_k127_741152_8
sigma factor antagonist activity
K04757
-
2.7.11.1
0.0000000000003105
83.0
View
LYD1_k127_741152_9
-
-
-
-
0.000000000003841
79.0
View
LYD1_k127_749455_0
SMART Elongator protein 3 MiaB NifB
-
-
-
3.222e-217
683.0
View
LYD1_k127_749455_1
SEFIR domain
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006228
549.0
View
LYD1_k127_749455_2
PFAM Radical SAM
K04070
-
1.97.1.4
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003407
416.0
View
LYD1_k127_749455_3
PFAM Flavin containing amine oxidoreductase
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005335
348.0
View
LYD1_k127_749455_4
SagB-type dehydrogenase domain
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109
322.0
View
LYD1_k127_749455_5
Belongs to the sulfur carrier protein TusA family
-
-
-
0.000000000000000000000008355
102.0
View
LYD1_k127_749455_6
Universal stress protein family
-
-
-
0.000000000002311
73.0
View
LYD1_k127_749455_7
-
-
-
-
0.0000005244
56.0
View
LYD1_k127_7498_0
Bacterial regulatory protein, Fis family
K13599
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008288
532.0
View
LYD1_k127_7498_1
GHKL domain
K13598
-
2.7.13.3
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019
517.0
View
LYD1_k127_7498_2
Adenosine specific kinase
K09129
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000003871
265.0
View
LYD1_k127_7498_3
-
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000002157
239.0
View
LYD1_k127_7498_4
PFAM Histidine triad (HIT) protein
K02503
-
-
0.00000000000000000000000000000000000000000002803
166.0
View
LYD1_k127_7498_5
Histidine biosynthesis bifunctional protein HisIE
K01496,K11755
-
3.5.4.19,3.6.1.31
0.00000000000000000000000000000000000000000007043
162.0
View
LYD1_k127_7498_7
Phosphoribosyl-AMP cyclohydrolase
K01496,K01497,K01523,K01814,K11755
GO:0000105,GO:0000287,GO:0003674,GO:0003824,GO:0004635,GO:0004636,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009605,GO:0009607,GO:0009987,GO:0016053,GO:0016462,GO:0016787,GO:0016810,GO:0016814,GO:0016817,GO:0016818,GO:0018130,GO:0019238,GO:0019438,GO:0019752,GO:0030312,GO:0034641,GO:0040007,GO:0043167,GO:0043169,GO:0043207,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0052803,GO:0071704,GO:0071944,GO:0075136,GO:0075139,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
3.5.4.19,3.5.4.25,3.6.1.31,5.3.1.16
0.0000000000000000000000004278
107.0
View
LYD1_k127_750476_0
Phage integrase, N-terminal SAM-like domain
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000006029
282.0
View
LYD1_k127_750476_1
4Fe-4S dicluster domain
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000001346
254.0
View
LYD1_k127_750476_2
Belongs to the ParB family
K03497
GO:0005575,GO:0005622,GO:0005623,GO:0007059,GO:0008150,GO:0009295,GO:0009987,GO:0022603,GO:0042173,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0043937,GO:0043938,GO:0044424,GO:0044464,GO:0045595,GO:0045597,GO:0045881,GO:0048518,GO:0048522,GO:0050789,GO:0050793,GO:0050794,GO:0051094,GO:0065007
-
0.00000000000000000000000000000008241
136.0
View
LYD1_k127_750476_3
Cytochrome C oxidase, cbb3-type, subunit III
K08906
-
-
0.000000000000000000000004397
108.0
View
LYD1_k127_750476_4
DNA-binding protein PTS system, IIA component
K02806
-
-
0.0003254
48.0
View
LYD1_k127_769998_0
phosphoglucosamine mutase activity
K01835,K01840
-
5.4.2.2,5.4.2.8
1.811e-225
710.0
View
LYD1_k127_769998_1
Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
K00052
-
1.1.1.85
1.057e-203
636.0
View
LYD1_k127_769998_10
Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system
K03116
-
-
0.0000000000000002121
80.0
View
LYD1_k127_769998_2
Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
K00133
-
1.2.1.11
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007099
590.0
View
LYD1_k127_769998_3
Ammonium Transporter Family
K03320
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008816
586.0
View
LYD1_k127_769998_4
PLD-like domain
K06131
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001681
482.0
View
LYD1_k127_769998_5
S-adenosylhomocysteine deaminase activity
K12960
-
3.5.4.28,3.5.4.31
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001838
471.0
View
LYD1_k127_769998_6
Pyridoxal-phosphate dependent enzyme
K01754
-
4.3.1.19
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001341
370.0
View
LYD1_k127_769998_7
Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
K13292
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000275
254.0
View
LYD1_k127_769998_8
-
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000001996
231.0
View
LYD1_k127_769998_9
lipolytic protein G-D-S-L family
-
-
-
0.00000000000000000000000000000000001629
141.0
View
LYD1_k127_77545_0
GGDEF domain containing protein
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002612
470.0
View
LYD1_k127_77545_1
HD domain
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003801
436.0
View
LYD1_k127_77545_2
PFAM Hemerythrin HHE cation binding domain
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000008372
232.0
View
LYD1_k127_77545_3
Protein of unknown function, DUF480
K09915
-
-
0.0000000000000000000000000000000000000000000000000000000000003776
218.0
View
LYD1_k127_77545_4
protein histidine kinase activity
K01768,K03406,K07636,K07716,K17763
-
2.7.13.3,4.6.1.1
0.000000000000000000000000000000000002224
145.0
View
LYD1_k127_77545_5
PKD domain
-
-
-
0.0006397
52.0
View
LYD1_k127_781288_0
UvrD-like helicase C-terminal domain
K03657
-
3.6.4.12
2.59e-257
811.0
View
LYD1_k127_781288_1
Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
K00820
GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576
2.6.1.16
1.7e-227
719.0
View
LYD1_k127_781288_10
4Fe-4S ferredoxin iron-sulfur binding domain protein
K07138
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003953
407.0
View
LYD1_k127_781288_11
Transcriptional regulator
-
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003964
381.0
View
LYD1_k127_781288_12
Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
K07056
-
2.1.1.198
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001178
355.0
View
LYD1_k127_781288_13
Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
K01778
-
5.1.1.7
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003695
352.0
View
LYD1_k127_781288_14
Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis
K02535
-
3.5.1.108
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000364
317.0
View
LYD1_k127_781288_15
Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates
K00772
-
2.4.2.28
0.000000000000000000000000000000000000000000000000000000000000000000000000007398
260.0
View
LYD1_k127_781288_16
Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
K01586
-
4.1.1.20
0.000000000000000000000000000000000000000000000000000000000000000004269
229.0
View
LYD1_k127_781288_17
Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
K04042
-
2.3.1.157,2.7.7.23
0.00000000000000000000000000000000000000000000000000000000000000001137
229.0
View
LYD1_k127_781288_18
Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
K01935
GO:0003674,GO:0003824,GO:0004141,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0017144,GO:0018130,GO:0019752,GO:0032787,GO:0034641,GO:0042364,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
6.3.3.3
0.00000000000000000000000000000000000000000000000000000000000000006798
230.0
View
LYD1_k127_781288_19
Protein of unknown function (DUF502)
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000886
227.0
View
LYD1_k127_781288_2
AMP-binding enzyme C-terminal domain
K05939
-
2.3.1.40,6.2.1.20
9.564e-209
660.0
View
LYD1_k127_781288_20
Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
K01151
-
3.1.21.2
0.000000000000000000000000000000000000000000000000000000000000001741
228.0
View
LYD1_k127_781288_21
Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
K04042
-
2.3.1.157,2.7.7.23
0.00000000000000000000000000000000000000000000000000000000000007029
223.0
View
LYD1_k127_781288_22
helix_turn_helix, cAMP Regulatory protein
-
-
-
0.000000000000000000000000000000000000000000000000000000006718
205.0
View
LYD1_k127_781288_23
PFAM short chain dehydrogenase
K00059
-
1.1.1.100
0.00000000000000000000000000000000000000000000000000217
190.0
View
LYD1_k127_781288_24
Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
K01579
-
4.1.1.11
0.0000000000000000000000000000000000000000003118
160.0
View
LYD1_k127_781288_25
Glu-tRNAGln amidotransferase C subunit
K02435
-
6.3.5.6,6.3.5.7
0.000000000000000000000000008733
111.0
View
LYD1_k127_781288_26
nucleotidyltransferase activity
K07075
-
-
0.000000000000000000000001022
111.0
View
LYD1_k127_781288_27
-
-
-
-
0.0000000000000000000006546
100.0
View
LYD1_k127_781288_28
Domain of unknown function (DUF1858)
-
-
-
0.0000000000000000002748
89.0
View
LYD1_k127_781288_3
Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses
K01916,K01950
GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008795,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016874,GO:0016879,GO:0016880,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
6.3.1.5,6.3.5.1
1.15e-201
645.0
View
LYD1_k127_781288_30
Aldehyde dehydrogenase family
K00141,K22187
-
1.2.1.28
0.000000009491
58.0
View
LYD1_k127_781288_32
4Fe-4S binding domain
-
-
-
0.000005825
50.0
View
LYD1_k127_781288_4
cyclic 2,3-diphosphoglycerate synthetase activity
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004987
582.0
View
LYD1_k127_781288_5
Peptidase U62 modulator of DNA gyrase
K03568
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004869
537.0
View
LYD1_k127_781288_6
Two component, sigma54 specific, transcriptional regulator, Fis family
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009732
509.0
View
LYD1_k127_781288_7
PFAM Na dependent nucleoside transporter
K03317
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003395
501.0
View
LYD1_k127_781288_8
Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
K01714
-
4.3.3.7
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002294
448.0
View
LYD1_k127_781288_9
phosphosulfolactate synthase activity
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006333
422.0
View
LYD1_k127_784088_0
PFAM Type II secretion system protein E
K02454
-
-
2.02e-199
632.0
View
LYD1_k127_784088_1
Type II and III secretion system protein
K02453
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159
528.0
View
LYD1_k127_784088_2
General secretion pathway protein F
K02455,K02653
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000001115
263.0
View
LYD1_k127_784088_3
protein transport across the cell outer membrane
K02452,K02463
-
-
0.00000000000000000000000000000000000005339
153.0
View
LYD1_k127_789584_0
PFAM metal-dependent phosphohydrolase, HD sub domain
-
-
-
0.0000000000000000000000000000000000000000000000000000000000001904
223.0
View
LYD1_k127_789584_1
PFAM Chromate transporter
K07240
-
-
0.00000000000000000000005779
100.0
View
LYD1_k127_789584_2
NAD(P)H-binding
-
-
-
0.0000000000000000004492
87.0
View
LYD1_k127_789584_3
SNARE associated Golgi protein
-
-
-
0.00000008472
55.0
View
LYD1_k127_804384_0
Belongs to the binding-protein-dependent transport system permease family
K01998
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003089
472.0
View
LYD1_k127_804384_1
Belongs to the binding-protein-dependent transport system permease family
K01997
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003661
410.0
View
LYD1_k127_804384_2
Branched-chain amino acid ATP-binding cassette transporter
K01995,K01998
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001338
334.0
View
LYD1_k127_804384_3
Psort location CytoplasmicMembrane, score
K01996
-
-
0.00000000000000000000000000000000000000000000000000000000004768
210.0
View
LYD1_k127_804384_4
Receptor family ligand binding region
K01999
-
-
0.000000000000000000000000000000000000000000000000000001801
195.0
View
LYD1_k127_821486_0
PFAM Mannosyl oligosaccharide glucosidase
-
-
-
0.0
1138.0
View
LYD1_k127_821486_1
curli production assembly transport component CsgG
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004236
308.0
View
LYD1_k127_821486_2
PFAM SNARE associated Golgi protein
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009096
298.0
View
LYD1_k127_821486_3
HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
K02482
-
2.7.13.3
0.0000000000000000000000000000000000000000000000000000000000000000000000000002037
278.0
View
LYD1_k127_821486_4
PFAM pyridoxamine 5-phosphate
-
-
-
0.00000000000000000000000000000000000000000005154
163.0
View
LYD1_k127_821486_5
epimerase dehydratase
K07071
-
-
0.00000000000000000000000000000000001644
141.0
View
LYD1_k127_821486_6
PFAM flavin reductase domain protein FMN-binding
-
-
-
0.000000000000000000000000000000002035
133.0
View
LYD1_k127_821486_7
Pfam:Pyridox_oxidase
-
-
-
0.0000000000000000000000306
104.0
View
LYD1_k127_831085_0
Elongation factor G, domain IV
K02355
-
-
4.827e-296
922.0
View
LYD1_k127_831085_1
Glucose-1-phosphate thymidylyltransferase
K00973
-
2.7.7.24
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002165
433.0
View
LYD1_k127_831085_2
Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
K01710
-
4.2.1.46
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002743
421.0
View
LYD1_k127_831085_3
ABC1 family
K03688
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000001565
290.0
View
LYD1_k127_831085_4
Male sterility protein
K00067
-
1.1.1.133
0.00000000000000000000000000000000000000000000000000000000000000000000000000000001625
276.0
View
LYD1_k127_831085_5
dTDP-4-dehydrorhamnose 3,5-epimerase
K01790
-
5.1.3.13
0.000000000000000000000000000000000000000000000000000004438
193.0
View
LYD1_k127_831085_7
DUF218 domain
-
-
-
0.0000000000000004314
86.0
View
LYD1_k127_831085_8
-
-
-
-
0.00000000003458
67.0
View
LYD1_k127_831085_9
Positive regulator of sigma(E), RseC MucC
K03803
-
-
0.000004795
54.0
View
LYD1_k127_844821_0
Belongs to the glycosyl hydrolase 13 family
-
-
-
1.264e-315
982.0
View
LYD1_k127_844821_1
Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
K01736
-
4.2.3.5
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005679
462.0
View
LYD1_k127_844821_10
Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
K00891
GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615
2.7.1.71
0.0000000000000000000000000000000000000000000000001646
181.0
View
LYD1_k127_844821_11
CAAX protease self-immunity
K07052
-
-
0.0000000001016
70.0
View
LYD1_k127_844821_2
Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
K01735
-
4.2.3.4
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375
428.0
View
LYD1_k127_844821_3
Phosphate transporter family
K03306
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085
395.0
View
LYD1_k127_844821_4
Citrate synthase, C-terminal domain
K01647
-
2.3.3.1
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002476
398.0
View
LYD1_k127_844821_5
Signal transduction histidine kinase
K07636
-
2.7.13.3
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000037
357.0
View
LYD1_k127_844821_6
Belongs to the peptidase S8 family
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591
353.0
View
LYD1_k127_844821_7
Transcriptional regulatory protein, C terminal
K07657
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009268
287.0
View
LYD1_k127_844821_8
outer membrane autotransporter barrel domain
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000002707
241.0
View
LYD1_k127_844821_9
Protein of unknown function DUF47
K02039,K07220
-
-
0.00000000000000000000000000000000000000000000000006973
184.0
View
LYD1_k127_859791_0
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329
579.0
View
LYD1_k127_859791_1
Belongs to the precorrin methyltransferase family
K13542
-
2.1.1.107,4.2.1.75
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104
456.0
View
LYD1_k127_859791_10
Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
K03385
-
1.7.2.2
0.000000000000000000000000004918
120.0
View
LYD1_k127_859791_11
PFAM transposase IS116 IS110 IS902 family protein
-
-
-
0.0000000000000000000000006103
106.0
View
LYD1_k127_859791_12
homolog subfamily A member
K09504
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464
-
0.0000000004646
72.0
View
LYD1_k127_859791_13
Tellurite resistance protein TehB
-
-
-
0.00001091
48.0
View
LYD1_k127_859791_2
Receptor family ligand binding region
K01999
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001861
375.0
View
LYD1_k127_859791_3
HELICc2
K03722
-
3.6.4.12
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004805
367.0
View
LYD1_k127_859791_4
Two component, sigma54 specific, transcriptional regulator, Fis family
K02481,K07713
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001731
323.0
View
LYD1_k127_859791_5
Cation efflux family
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000009411
269.0
View
LYD1_k127_859791_6
Two component regulator propeller
K00936
-
2.7.13.3
0.000000000000000000000000000000000000000000000000000000000000000002137
248.0
View
LYD1_k127_859791_7
Response regulator, receiver
-
-
-
0.0000000000000000000000000000000000000000000000000000002478
201.0
View
LYD1_k127_859791_8
Protein of unknown function (DUF3365)
-
-
-
0.000000000000000000000000000000002429
150.0
View
LYD1_k127_859791_9
Cytochrome c554 and c-prime
-
-
-
0.000000000000000000000000000000009544
127.0
View
LYD1_k127_869469_0
Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
K01657
-
4.1.3.27
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429
576.0
View
LYD1_k127_869469_1
Major facilitator superfamily MFS_1
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005052
551.0
View
LYD1_k127_869469_2
-
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002046
496.0
View
LYD1_k127_869469_3
Transglycosylase SLT domain
K08309
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202
379.0
View
LYD1_k127_869469_4
pfkB family carbohydrate kinase
K00847,K00852
-
2.7.1.15,2.7.1.4
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001
333.0
View
LYD1_k127_869469_5
TIGRFAM glutamine amidotransferase of anthranilate synthase
K01658,K01664
-
2.6.1.85,4.1.3.27
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006984
304.0
View
LYD1_k127_869469_6
Putative zinc- or iron-chelating domain
K06940
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000004861
268.0
View
LYD1_k127_869469_7
protein secretion
K03116,K03117
-
-
0.0000000004979
63.0
View
LYD1_k127_872326_0
Diguanylate cyclase
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001682
594.0
View
LYD1_k127_872326_1
Uncharacterised protein family (UPF0182)
K09118
GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944
-
0.0000000000000000000000000000000000000000000000000000000000000000006222
238.0
View
LYD1_k127_872326_2
Transposase
K07483
-
-
0.00000006968
57.0
View
LYD1_k127_886360_0
PFAM Extracellular ligand-binding receptor
K01999
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078
555.0
View
LYD1_k127_886360_1
Belongs to the binding-protein-dependent transport system permease family
K01997
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006854
484.0
View
LYD1_k127_886360_2
Belongs to the binding-protein-dependent transport system permease family
K01998
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257
426.0
View
LYD1_k127_886360_3
denitrification pathway
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000472
367.0
View
LYD1_k127_886360_4
pfam abc
K01995
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006619
354.0
View
LYD1_k127_886360_5
ABC transporter related
K01996
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003909
291.0
View
LYD1_k127_886360_6
Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
K03620,K08354
GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009813
288.0
View
LYD1_k127_921153_0
Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
K00766,K13497
-
2.4.2.18,4.1.3.27
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184
398.0
View
LYD1_k127_921153_1
Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
K02836
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006106
391.0
View
LYD1_k127_921153_2
membrane
K09133
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002625
340.0
View
LYD1_k127_93034_0
Protein of unknown function (DUF2867)
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000009557
278.0
View
LYD1_k127_93034_1
addiction module antidote protein, HigA family
K21498
-
-
0.00000000000000000000000000000000000000001563
155.0
View
LYD1_k127_93034_2
PFAM S23 ribosomal protein
-
-
-
0.000000000000000000000000000001375
123.0
View
LYD1_k127_93034_3
Nucleotide binding protein, PINc
-
-
-
0.0000000000000000000000006036
112.0
View
LYD1_k127_93034_4
-
-
-
-
0.0000000000000000000000009006
112.0
View
LYD1_k127_93034_5
-
-
-
-
0.00000005622
57.0
View
LYD1_k127_9354_0
glucose sorbosone
K00117
-
1.1.5.2
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009403
433.0
View
LYD1_k127_9354_1
NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
K00020,K00042
-
1.1.1.31,1.1.1.60
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003459
329.0
View
LYD1_k127_9354_2
TGS domain
K06944
-
-
0.0000000000000000000000000000000002459
135.0
View
LYD1_k127_9354_3
Peptidyl-prolyl cis-trans
K03775
-
5.2.1.8
0.000000000000000000000000000000001014
136.0
View
LYD1_k127_9354_4
homoserine kinase type II (Protein kinase fold)
-
-
-
0.00000000000000000000000000006824
121.0
View
LYD1_k127_9354_5
Protein of unknown function (DUF1264)
-
-
-
0.000000000000003879
82.0
View
LYD1_k127_9354_6
Histone deacetylase domain
K04768
-
-
0.0000003431
52.0
View
LYD1_k127_9354_7
-
-
-
-
0.00006941
51.0
View
LYD1_k127_938522_0
epimerase dehydratase
K08679
-
5.1.3.6
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003411
571.0
View
LYD1_k127_938522_1
Nitroreductase
-
-
-
0.0000000001835
64.0
View
LYD1_k127_939374_0
ATPase family associated with various cellular activities (AAA)
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003686
537.0
View
LYD1_k127_939374_1
May be involved in recombinational repair of damaged DNA
K03631
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001945
400.0
View
LYD1_k127_939374_2
Cys/Met metabolism PLP-dependent enzyme
K01760,K01761
-
4.4.1.11,4.4.1.8
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007666
373.0
View
LYD1_k127_939374_3
PBP superfamily domain
K05772
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003194
349.0
View
LYD1_k127_939374_4
Alpha amylase, catalytic domain
K06044
-
5.4.99.15
0.00000000000000000000000000000000000000000000000000000000000000000000000000000007569
270.0
View
LYD1_k127_939374_5
IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
K02520
GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008
-
0.00000000000000000000000000000000000000000000000001205
186.0
View
LYD1_k127_939374_6
Transcriptional regulator
K02019,K05772
-
-
0.0000000000000000000000000000000000244
141.0
View
LYD1_k127_939374_7
'Cold-shock' DNA-binding domain
-
-
-
0.000000000000000000000005414
102.0
View
LYD1_k127_939374_8
PFAM 4Fe-4S
K00176
-
1.2.7.3
0.00000000000000000009646
90.0
View
LYD1_k127_944758_0
Belongs to the precorrin methyltransferase family
K13542
-
2.1.1.107,4.2.1.75
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158
551.0
View
LYD1_k127_944758_1
Acid phosphatase homologues
K19302
-
3.6.1.27
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003579
502.0
View
LYD1_k127_944758_2
Glycosyltransferase like family 2
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002707
460.0
View
LYD1_k127_944758_3
PFAM Phospholipid glycerol acyltransferase
K00655
-
2.3.1.51
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002382
286.0
View
LYD1_k127_944758_4
lysyltransferase activity
K07027
-
-
0.0000000000000000000000000000000000000009909
160.0
View
LYD1_k127_944758_5
Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor
K00833
-
2.6.1.62
0.0000000000000000000000003544
106.0
View
LYD1_k127_944758_6
GDP-mannose mannosyl hydrolase activity
-
-
-
0.00000000000000000002306
93.0
View
LYD1_k127_955542_0
Formyl transferase
-
-
-
0.000000000000000000000000000000002324
140.0
View
LYD1_k127_955542_1
Polysaccharide deacetylase
-
-
-
0.0000000000007893
79.0
View
LYD1_k127_96147_0
TIGRFAM molybdenum cofactor synthesis
K03750,K07219
-
2.10.1.1
9.158e-244
768.0
View
LYD1_k127_96147_1
PFAM 2Fe-2S iron-sulfur cluster binding domain
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005221
370.0
View
LYD1_k127_96147_2
Catalyzes the ferrous insertion into protoporphyrin IX
K01772
GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
4.99.1.1,4.99.1.9
0.000000000000000000000000005997
111.0
View
LYD1_k127_96147_3
Tetratricopeptide repeat
-
-
-
0.0003048
51.0
View
LYD1_k127_986266_0
The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
K03703
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003188
548.0
View
LYD1_k127_986266_1
PFAM PfkB
K00856
-
2.7.1.20
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000345
377.0
View
