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Overview

ID MAG02037
Name LYD1_bin.9
Sample SMP0052
Taxonomy
Kingdom Bacteria
Phylum Chloroflexota
Class Anaerolineae
Order Anaerolineales
Family UBA4823
Genus JAKOUW01
Species
Assembly information
Completeness (%) 94.67
Contamination (%) 5.95
GC content (%) 56.0
N50 (bp) 82,992
Genome size (bp) 4,810,052

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes3907

Gene name Description KEGG GOs EC E-value Score Sequence
LYD1_k127_1030986_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001049 276.0
LYD1_k127_1030986_1 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001868 294.0
LYD1_k127_1030986_2 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000008195 213.0
LYD1_k127_1098660_0 Converts the aldose L-fucose into the corresponding ketose L-fuculose - - - 1.696e-245 768.0
LYD1_k127_1098660_1 DEAD DEAH box helicase domain protein K06877 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 418.0
LYD1_k127_1098660_2 FGGY family of carbohydrate kinases, N-terminal domain K00854 - 2.7.1.17 0.000000000000000000000000000000000000000000000000000000000000002752 229.0
LYD1_k127_1098660_3 - - - - 0.000000000000003241 85.0
LYD1_k127_1117532_0 aldo keto reductase - GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002151 270.0
LYD1_k127_1117532_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000003341 220.0
LYD1_k127_1117532_3 - - - - 0.000000000000000000000000000000000000000000000000007045 185.0
LYD1_k127_1147098_0 hydrolase, family 65, central catalytic K00691 - 2.4.1.8 8.872e-299 935.0
LYD1_k127_1147098_1 Glycosyl hydrolase family 3 C-terminal domain K05349 - 3.2.1.21 5.158e-270 844.0
LYD1_k127_1147098_10 beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002932 441.0
LYD1_k127_1147098_11 Glycogen debranching enzyme K05989 - 3.2.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 454.0
LYD1_k127_1147098_12 PFAM Radical SAM domain protein K06941 - 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006773 400.0
LYD1_k127_1147098_13 inositol 2-dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006852 392.0
LYD1_k127_1147098_14 Psort location Cytoplasmic, score 8.87 K02564 - 3.5.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008805 376.0
LYD1_k127_1147098_15 Domain of unknown function (DUF4143) K07133 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000269 365.0
LYD1_k127_1147098_16 ABC transporter related K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007765 335.0
LYD1_k127_1147098_17 Phosphogluconate dehydrogenase (decarboxylating) C-term - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003789 293.0
LYD1_k127_1147098_18 Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion K02564 - 3.5.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003262 286.0
LYD1_k127_1147098_19 PFAM secretion protein HlyD family protein K01993 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001693 288.0
LYD1_k127_1147098_2 Glycosyl hydrolase family 65 central catalytic domain K18783 - 2.4.1.279 4.642e-258 816.0
LYD1_k127_1147098_20 Chromate resistance exported protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001682 269.0
LYD1_k127_1147098_21 ATPases associated with a variety of cellular activities K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004644 274.0
LYD1_k127_1147098_22 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002918 268.0
LYD1_k127_1147098_23 Integral membrane protein (intg_mem_TP0381) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000176 260.0
LYD1_k127_1147098_24 beta-galactosidase K12308 - 3.2.1.23 0.000000000000000000000000000000000000000000000000000000000000000000003532 260.0
LYD1_k127_1147098_25 Pyridine nucleotide-disulphide oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000001241 226.0
LYD1_k127_1147098_26 Haloacid dehalogenase-like hydrolase - GO:0003674,GO:0003824,GO:0003850,GO:0004346,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0042578,GO:0044237,GO:0050308,GO:0050309 - 0.000000000000000000000000000000000000000000000000000000000001567 216.0
LYD1_k127_1147098_27 PFAM Isochorismatase - - - 0.0000000000000000000000000000000000000000000000000000000002346 211.0
LYD1_k127_1147098_28 Psort location Cytoplasmic, score - - - 0.000000000000000000000000000000000000000000000000000146 198.0
LYD1_k127_1147098_29 - - - - 0.0000000000000000000000000000000000000000000000000004706 189.0
LYD1_k127_1147098_3 COGs COG4591 ABC-type transport system involved in lipoprotein release permease component K02004 - - 7.114e-232 743.0
LYD1_k127_1147098_31 Protein of unknown function (DUF1003) - - - 0.0000000000000000000000000000000000000000007154 164.0
LYD1_k127_1147098_32 - - - - 0.000000000000000000000000000000000000000001588 162.0
LYD1_k127_1147098_33 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000000009867 146.0
LYD1_k127_1147098_34 alpha-galactosidase K07407 - 3.2.1.22 0.0000000000000000000000000000000004545 139.0
LYD1_k127_1147098_35 - - - - 0.000000000000000000000000006893 113.0
LYD1_k127_1147098_36 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.00000000000000000000000002178 125.0
LYD1_k127_1147098_37 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000000000000000000001564 123.0
LYD1_k127_1147098_39 4Fe-4S dicluster domain K03522,K05337 - - 0.0000000000000000000008089 96.0
LYD1_k127_1147098_4 PFAM Uroporphyrinogen decarboxylase (URO-D) - - - 1.298e-198 624.0
LYD1_k127_1147098_40 - - - - 0.000000000000000000002076 101.0
LYD1_k127_1147098_41 lactoylglutathione lyase activity - - - 0.00000000000000000002005 96.0
LYD1_k127_1147098_42 - - - - 0.000000000000001015 78.0
LYD1_k127_1147098_44 Family 4 glycosyl hydrolase C-terminal domain - - - 0.00000000000141 68.0
LYD1_k127_1147098_45 Family of unknown function (DUF5343) - - - 0.00000000000414 76.0
LYD1_k127_1147098_46 - - - - 0.00000000002536 74.0
LYD1_k127_1147098_48 Domain of unknown function (DUF4114) - - - 0.00000006541 59.0
LYD1_k127_1147098_49 - - - - 0.0000006007 57.0
LYD1_k127_1147098_5 Cysteine-rich secretory protein family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 571.0
LYD1_k127_1147098_50 - - - - 0.000005002 50.0
LYD1_k127_1147098_51 transposition, DNA-mediated - - - 0.00001041 48.0
LYD1_k127_1147098_52 PFAM Na-Ca exchanger integrin-beta4 peptidase-like FG-GAP K20276 - - 0.00001419 54.0
LYD1_k127_1147098_53 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.0001841 53.0
LYD1_k127_1147098_54 Psort location Cytoplasmic, score - - - 0.0007329 49.0
LYD1_k127_1147098_6 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003425 566.0
LYD1_k127_1147098_7 ABC transporter transmembrane region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002064 563.0
LYD1_k127_1147098_8 Chromate K07240 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000156 516.0
LYD1_k127_1147098_9 COGs COG1132 ABC-type multidrug transport system ATPase and permease components K06147 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009967 501.0
LYD1_k127_1375747_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1234.0
LYD1_k127_1375747_1 Transmembrane region of lysyl-tRNA synthetase K07027,K14205 - 2.3.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005722 616.0
LYD1_k127_1375747_10 NAD(P)H-binding K00091 - 1.1.1.219 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001392 283.0
LYD1_k127_1375747_11 Belongs to the carbohydrate kinase PfkB family K00882 - 2.7.1.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000849 276.0
LYD1_k127_1375747_12 Nucleoside H+ symporter K05820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003159 275.0
LYD1_k127_1375747_13 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000003375 242.0
LYD1_k127_1375747_14 Class ii aldolase K01628,K03077 - 4.1.2.17,5.1.3.4 0.000000000000000000000000000000000000000000000000000000000000000000001701 241.0
LYD1_k127_1375747_15 protein-(glutamine-N5) methyltransferase activity K00571 - 2.1.1.72 0.00000000000000000000000000000000000000000000000000002377 198.0
LYD1_k127_1375747_16 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000002732 190.0
LYD1_k127_1375747_17 Haem-binding domain - - - 0.0000000000000000000000000000000000000000006132 161.0
LYD1_k127_1375747_18 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.0000000000000000000000000000000000000000006729 160.0
LYD1_k127_1375747_19 Putative auto-transporter adhesin, head GIN domain - - - 0.0000000000000000000000000000000000000000007293 169.0
LYD1_k127_1375747_2 PFAM peptidase S1 and S6, chymotrypsin Hap K04771,K08070 - 1.3.1.74,3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001562 505.0
LYD1_k127_1375747_20 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000001399 171.0
LYD1_k127_1375747_21 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000000000000000000004448 170.0
LYD1_k127_1375747_22 Lysylphosphatidylglycerol synthase TM region - - - 0.00000000000000000000000000000000000000001539 177.0
LYD1_k127_1375747_23 - - - - 0.0000000000000000000000000000000000000001737 156.0
LYD1_k127_1375747_24 - - - - 0.00000000000000000000000000000000002257 141.0
LYD1_k127_1375747_25 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000004264 141.0
LYD1_k127_1375747_26 carbohydrate transport K02027,K10117,K11751 - 3.1.3.5,3.6.1.45 0.000000000000000000000000000000006414 143.0
LYD1_k127_1375747_27 ADP-ribosylglycohydrolase - - - 0.000000000000000000000000001136 124.0
LYD1_k127_1375747_28 transcription activator, effector binding K13653 - - 0.0000000000000000000000006948 110.0
LYD1_k127_1375747_29 glyoxalase III activity K13653 - - 0.0000000000000000000004911 102.0
LYD1_k127_1375747_3 Uroporphyrinogen decarboxylase (URO-D) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003174 494.0
LYD1_k127_1375747_30 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.00000000000000000002364 91.0
LYD1_k127_1375747_31 Domain of unknown function (DUF4342) - - - 0.00000000000000000009381 92.0
LYD1_k127_1375747_32 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000001698 81.0
LYD1_k127_1375747_33 - - - - 0.00000000000007934 83.0
LYD1_k127_1375747_35 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.00000004199 57.0
LYD1_k127_1375747_37 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.0005555 44.0
LYD1_k127_1375747_4 histidine kinase HAMP region domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001851 451.0
LYD1_k127_1375747_5 histidine kinase HAMP region domain protein K07642 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002846 404.0
LYD1_k127_1375747_6 Two component transcriptional regulator, winged helix family K07669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001675 343.0
LYD1_k127_1375747_7 Participates in transcription elongation, termination and antitermination K02601 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001892 331.0
LYD1_k127_1375747_8 Two component transcriptional regulator, winged helix family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003782 325.0
LYD1_k127_1375747_9 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003573 308.0
LYD1_k127_139332_0 Domain of unknown function (DUF4976) - - - 4.526e-232 726.0
LYD1_k127_139332_1 exo-alpha-(2->6)-sialidase activity - - - 2.255e-208 697.0
LYD1_k127_139332_10 ABC transporter substrate-binding protein PnrA-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002996 316.0
LYD1_k127_139332_11 Inner membrane component of T3SS, cytoplasmic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000299 292.0
LYD1_k127_139332_12 Streptomycin adenylyltransferase K05593 - - 0.00000000000000000000000000000000000000000000000000000000000000000007213 241.0
LYD1_k127_139332_13 RibD C-terminal domain K00287 - 1.5.1.3 0.00000000000000000000000000000000000000000000000000000000004568 210.0
LYD1_k127_139332_14 Transposase - - - 0.0000000000000000000000000000000000000000000000000001383 193.0
LYD1_k127_139332_15 NADPH-dependent FMN reductase - - - 0.00000000000000000000000000000000000000000000001253 178.0
LYD1_k127_139332_16 NIF3 (NGG1p interacting factor 3) - - - 0.00000000000000000000000000000000000001087 154.0
LYD1_k127_139332_17 PFAM RNP-1 like RNA-binding protein - - - 0.000000000000000000000000000001501 124.0
LYD1_k127_139332_18 Phytanoyl-CoA dioxygenase (PhyH) K21195 - 1.14.11.46 0.00000000000000000000000002963 117.0
LYD1_k127_139332_19 Transposase IS200 like - - - 0.000000000000000000001032 104.0
LYD1_k127_139332_2 adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000475 574.0
LYD1_k127_139332_20 - - - - 0.000000000000000000005206 99.0
LYD1_k127_139332_22 - - - - 0.0000000000000001001 82.0
LYD1_k127_139332_3 CHAT domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002884 590.0
LYD1_k127_139332_4 PFAM aldo keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006194 512.0
LYD1_k127_139332_5 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007281 457.0
LYD1_k127_139332_6 Pyridoxal-phosphate dependent enzyme K17950 - 4.4.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 370.0
LYD1_k127_139332_7 PFAM 3-carboxy-cis,cis-muconate lactonizing enzyme K07404 - 3.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 370.0
LYD1_k127_139332_8 PFAM transglutaminase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007969 368.0
LYD1_k127_139332_9 Protein of unknown function (DUF229) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002149 347.0
LYD1_k127_1424550_0 Flavin containing amine oxidoreductase K09516,K09835 - 1.3.99.23,5.2.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002383 522.0
LYD1_k127_1424550_1 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000147 394.0
LYD1_k127_1424550_2 PFAM Glycosyl transferase family 2 K14597 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 302.0
LYD1_k127_1424550_3 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.000000000000000000000000000000000000000003298 162.0
LYD1_k127_1424550_4 - - - - 0.00000000000000000000000000000000000000000902 158.0
LYD1_k127_1424550_5 AhpC/TSA family K03564 - 1.11.1.15 0.00000000000000000000000000000000000006307 144.0
LYD1_k127_1424550_6 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 0.0000000000000000000000000004899 114.0
LYD1_k127_1424550_7 Nucleotidyl transferase AbiEii toxin, Type IV TA system - - - 0.0000000000006515 73.0
LYD1_k127_1424550_8 - - - - 0.0000009587 55.0
LYD1_k127_1432578_0 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001497 417.0
LYD1_k127_1432578_1 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005622 403.0
LYD1_k127_1432578_10 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000006908 72.0
LYD1_k127_1432578_2 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03635,K21142 - 2.8.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 316.0
LYD1_k127_1432578_3 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005121 308.0
LYD1_k127_1432578_4 Psort location CytoplasmicMembrane, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001999 303.0
LYD1_k127_1432578_5 malonyl coa-acyl carrier protein transacylase K00645 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000003065 266.0
LYD1_k127_1432578_6 TIGRFAM threonine synthase K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000004056 265.0
LYD1_k127_1432578_7 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.0000000000000000000000000000000000000000000000000000000006766 205.0
LYD1_k127_1432578_8 PFAM short chain dehydrogenase K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000006974 167.0
LYD1_k127_1432578_9 Belongs to the bacterial ribosomal protein bL32 family K02911 GO:0000027,GO:0000302,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006950,GO:0006979,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050896,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1990904 - 0.00000000000000000000146 96.0
LYD1_k127_1664548_0 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 309.0
LYD1_k127_1664548_1 PFAM Peptidase family M20 M25 M40 - - - 0.0000000000000000000000000000005811 124.0
LYD1_k127_168984_0 Molydopterin dinucleotide binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002338 557.0
LYD1_k127_168984_1 PFAM Polysulphide reductase, NrfD K00185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 495.0
LYD1_k127_168984_10 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003715 254.0
LYD1_k127_168984_11 PFAM Basic membrane lipoprotein K02058,K07335 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005582 258.0
LYD1_k127_168984_12 Response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000904 243.0
LYD1_k127_168984_13 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.00000000000000000000000000000000000000000000000000000000000003724 227.0
LYD1_k127_168984_14 helix_turn_helix, Lux Regulon K02282 - - 0.00000000000000000000000000000000000000000000000000000008533 202.0
LYD1_k127_168984_15 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.0000000000000000000000000000000000000000000000000005345 198.0
LYD1_k127_168984_16 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000003881 185.0
LYD1_k127_168984_17 Cytochrome c7 and related cytochrome c - - - 0.000000000000000000000000000000000000000000004438 169.0
LYD1_k127_168984_18 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000000002778 147.0
LYD1_k127_168984_19 - - - - 0.0000000000000000000000000008982 116.0
LYD1_k127_168984_2 Succinyl-CoA synthetase, alpha subunit K02381 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 423.0
LYD1_k127_168984_20 Cytochrome c - - - 0.0000000000000000000001454 109.0
LYD1_k127_168984_21 Protein of unknown function (DUF3341) - - - 0.000000000000000000000582 102.0
LYD1_k127_168984_22 methyltransferase activity - - - 0.00000000000000006245 88.0
LYD1_k127_168984_23 transcriptional regulator, LuxR family - - - 0.0000000000005041 83.0
LYD1_k127_168984_24 - - - - 0.00000000000419 75.0
LYD1_k127_168984_25 - - - - 0.000000007226 61.0
LYD1_k127_168984_26 Domain of unknown function (DUF4386) - - - 0.00000001595 64.0
LYD1_k127_168984_27 Cytochrome c - - - 0.0000004417 61.0
LYD1_k127_168984_28 PFAM GTP cyclohydrolase I K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 0.0006972 44.0
LYD1_k127_168984_3 PFAM ABC transporter K02056 - 3.6.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001894 399.0
LYD1_k127_168984_4 CoA-ligase K02381 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000067 388.0
LYD1_k127_168984_5 adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004203 341.0
LYD1_k127_168984_6 4Fe-4S binding domain K00184 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005099 305.0
LYD1_k127_168984_7 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001843 279.0
LYD1_k127_168984_8 Alpha/beta hydrolase family K18053 - 1.13.12.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002 278.0
LYD1_k127_168984_9 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002244 294.0
LYD1_k127_1703839_0 Fibronectin type III-like domain K05349 - 3.2.1.21 5.44e-250 792.0
LYD1_k127_1703839_1 - - - - 5.153e-215 696.0
LYD1_k127_1703839_10 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000838 296.0
LYD1_k127_1703839_11 PFAM Radical SAM superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001036 288.0
LYD1_k127_1703839_12 beta-galactosidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005401 269.0
LYD1_k127_1703839_13 Aldo Keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002098 261.0
LYD1_k127_1703839_14 KR domain K00034 - 1.1.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000003149 249.0
LYD1_k127_1703839_15 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS K03518 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000001935 211.0
LYD1_k127_1703839_16 Molybdopterin oxidoreductase Fe4S4 region K00336,K05299 - 1.17.1.10,1.6.5.3 0.00000000000000000000000000000000000000000000000003518 186.0
LYD1_k127_1703839_17 PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334,K18330,K22340 - 1.12.1.3,1.17.1.11,1.6.5.3 0.00000000000000000000000000000004912 129.0
LYD1_k127_1703839_18 Mo-molybdopterin cofactor metabolic process K03154 - - 0.0009972 45.0
LYD1_k127_1703839_2 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 3.135e-210 670.0
LYD1_k127_1703839_3 Aldehyde oxidase and xanthine dehydrogenase, a b hammerhead domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003545 580.0
LYD1_k127_1703839_4 Oligopeptide/dipeptide transporter, C-terminal region K02032 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004525 487.0
LYD1_k127_1703839_5 Binding-protein-dependent transport system inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005326 477.0
LYD1_k127_1703839_6 ABC-type dipeptide oligopeptide nickel transport system ATPase component K02031 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004633 460.0
LYD1_k127_1703839_7 N-terminal TM domain of oligopeptide transport permease C K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002778 432.0
LYD1_k127_1703839_8 NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding K00335,K18331,K22339 - 1.12.1.3,1.17.1.11,1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004825 426.0
LYD1_k127_1703839_9 Protein of unknown function (DUF1343) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005976 422.0
LYD1_k127_1726408_0 hydrolase, family 3 K05349 - 3.2.1.21 1.062e-212 674.0
LYD1_k127_1726408_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 407.0
LYD1_k127_1726408_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000001411 226.0
LYD1_k127_1726408_3 Protein of unknown function (DUF1810) - - - 0.0000000000000000000000000000000000000000000000000001994 190.0
LYD1_k127_1726408_4 Domain of unknown function (DUF362) - - - 0.0000000000000000000000000000000000000000000001441 183.0
LYD1_k127_1813685_0 Part of the MsrPQ system that repairs oxidized cell envelope proteins containing methionine sulfoxide residues (Met- O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated cell envelope proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007322 383.0
LYD1_k127_1813685_1 Methylated-DNA- protein -cysteine S-methyltransferase DNA binding K00567,K10778 - 2.1.1.63 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001726 306.0
LYD1_k127_1813685_2 Part of the MsrPQ system that repairs oxidized cell envelope proteins containing methionine sulfoxide residues (Met- O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated cell envelope proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain K17247 - - 0.000000000000000000000000000000000000459 149.0
LYD1_k127_1813685_3 COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related deacylases K01438,K01439 - 3.5.1.16,3.5.1.18 0.00000000002014 68.0
LYD1_k127_2057071_0 glycerophosphodiester transmembrane transport K02026 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005159 325.0
LYD1_k127_2057071_1 transmembrane transport K02025,K05814,K10118,K10237,K10241,K15771,K17235,K17316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008992 286.0
LYD1_k127_2057071_2 Bacterial extracellular solute-binding protein K02027 - - 0.00000000001767 74.0
LYD1_k127_2064799_0 SNF2 family N-terminal domain - - - 0.0 1466.0
LYD1_k127_2064799_1 Belongs to the peptidase S8 family - - - 0.0 1364.0
LYD1_k127_2064799_10 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002589 526.0
LYD1_k127_2064799_11 glutamate-cysteine ligase activity K00836 - 2.6.1.76 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007899 501.0
LYD1_k127_2064799_12 Peptidase_C39 like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002849 476.0
LYD1_k127_2064799_13 ATP-grasp domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001907 468.0
LYD1_k127_2064799_14 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 453.0
LYD1_k127_2064799_15 PFAM Cys Met metabolism pyridoxal-phosphate-dependent K01739 - 2.5.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006156 456.0
LYD1_k127_2064799_16 Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015 443.0
LYD1_k127_2064799_17 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 GO:0003674,GO:0003824,GO:0003866,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0071704,GO:1901576 2.5.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 448.0
LYD1_k127_2064799_18 Fatty acid desaturase K10255 - 1.14.19.23,1.14.19.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005661 438.0
LYD1_k127_2064799_19 Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import K02007 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001814 435.0
LYD1_k127_2064799_2 Eco57I restriction-modification methylase - - - 1.351e-295 919.0
LYD1_k127_2064799_20 Belongs to the aspartate-semialdehyde dehydrogenase family K00133 - 1.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 421.0
LYD1_k127_2064799_21 PFAM aldo keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000242 403.0
LYD1_k127_2064799_22 COGs COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase) K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007119 398.0
LYD1_k127_2064799_23 4Fe-4S single cluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 398.0
LYD1_k127_2064799_24 Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate K10206 - 2.6.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007377 400.0
LYD1_k127_2064799_25 stress-induced mitochondrial fusion - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 393.0
LYD1_k127_2064799_26 4Fe-4S double cluster binding domain K18979 - 1.17.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001614 396.0
LYD1_k127_2064799_27 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002186 368.0
LYD1_k127_2064799_28 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004473 357.0
LYD1_k127_2064799_29 Dehydrogenase K00248,K00249,K20035 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016627,GO:0036094,GO:0043167,GO:0043168,GO:0048037,GO:0050660,GO:0050662,GO:0052890,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.3.8.1,1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003396 360.0
LYD1_k127_2064799_3 Lysine-2,3-aminomutase K01843 - 5.4.3.2 2.251e-238 743.0
LYD1_k127_2064799_30 Catalyzes the reversible phosphorylation of UMP to UDP K09903 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009076 350.0
LYD1_k127_2064799_31 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002786 351.0
LYD1_k127_2064799_32 Stage II sporulation E family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002297 360.0
LYD1_k127_2064799_33 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002312 349.0
LYD1_k127_2064799_34 ABC transporter K02006 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007892 323.0
LYD1_k127_2064799_35 Glycogen recognition site of AMP-activated protein kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001623 338.0
LYD1_k127_2064799_36 esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004246 319.0
LYD1_k127_2064799_37 histidine biosynthetic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007675 323.0
LYD1_k127_2064799_38 D-isomer specific 2-hydroxyacid dehydrogenase K00058,K16843 - 1.1.1.310,1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008123 322.0
LYD1_k127_2064799_39 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004108 316.0
LYD1_k127_2064799_4 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues K01299 - 3.4.17.19 1.38e-211 670.0
LYD1_k127_2064799_40 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein K04517 - 1.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002588 296.0
LYD1_k127_2064799_41 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007055 292.0
LYD1_k127_2064799_42 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001092 283.0
LYD1_k127_2064799_43 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000385 271.0
LYD1_k127_2064799_44 Belongs to the CDS family K00981 - 2.7.7.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000009281 263.0
LYD1_k127_2064799_45 Transposase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006143 257.0
LYD1_k127_2064799_46 Ig-like domain from next to BRCA1 gene - - - 0.000000000000000000000000000000000000000000000000000000000000000000009423 248.0
LYD1_k127_2064799_47 Belongs to the UPF0312 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000984 239.0
LYD1_k127_2064799_48 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.0000000000000000000000000000000000000000000000000000000000000001462 232.0
LYD1_k127_2064799_49 TIGRFAM cobalt ABC transporter, inner membrane subunit CbiQ K02008 - - 0.000000000000000000000000000000000000000000000000000000000002499 218.0
LYD1_k127_2064799_5 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 1.748e-206 648.0
LYD1_k127_2064799_50 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.000000000000000000000000000000000000000000000000000000001015 204.0
LYD1_k127_2064799_51 domain, Protein - - - 0.00000000000000000000000000000000000000000000000001936 193.0
LYD1_k127_2064799_52 dihydroorotate dehydrogenase activity K17828 - 1.3.1.14 0.00000000000000000000000000000000000000000000001186 182.0
LYD1_k127_2064799_53 Protein of unknown function (DUF3048) C-terminal domain - - - 0.000000000000000000000000000000000000000001289 172.0
LYD1_k127_2064799_54 Polymer-forming cytoskeletal - - - 0.000000000000000000000000000000000000000004802 159.0
LYD1_k127_2064799_55 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.0000000000000000000000000000000000000002643 168.0
LYD1_k127_2064799_56 PFAM Chorismate mutase of the AroH class K06208 - 5.4.99.5 0.000000000000000000000000000000000000001201 151.0
LYD1_k127_2064799_57 acetyltransferase - - - 0.000000000000000000000000000000000008237 146.0
LYD1_k127_2064799_58 2 iron, 2 sulfur cluster binding K02823,K05368 - 1.16.1.3,1.5.1.41 0.000000000000000000000000000000001948 138.0
LYD1_k127_2064799_59 Ig-like domain from next to BRCA1 gene - - - 0.00000000000000000000000004656 121.0
LYD1_k127_2064799_6 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 2.203e-206 651.0
LYD1_k127_2064799_60 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 GO:0005575,GO:0005576,GO:0008150,GO:0040008,GO:0045926,GO:0048519,GO:0050789,GO:0065007 - 0.00000000000000000000000006825 111.0
LYD1_k127_2064799_61 Thioredoxin-like domain K03671 - - 0.0000000000000000000000001666 116.0
LYD1_k127_2064799_62 Histidine kinase - - - 0.0000000000000000000001965 114.0
LYD1_k127_2064799_63 AsnC-type helix-turn-helix domain K05710 - - 0.000000000000000004285 98.0
LYD1_k127_2064799_65 PIN domain - - - 0.0000000000000004115 85.0
LYD1_k127_2064799_66 Hep Hag repeat protein - - - 0.000000000000001196 87.0
LYD1_k127_2064799_67 Acetyltransferase (GNAT) domain - - - 0.0000000000000735 83.0
LYD1_k127_2064799_68 COG2146 Ferredoxin subunits of nitrite reductase and K00363 - 1.7.1.15 0.0000000000001038 84.0
LYD1_k127_2064799_7 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016740,GO:0016782,GO:0016783,GO:0016992,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0070283,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001943 555.0
LYD1_k127_2064799_71 - - - - 0.000002443 50.0
LYD1_k127_2064799_72 bacterial-type flagellum-dependent cell motility - - - 0.000009213 52.0
LYD1_k127_2064799_73 toxin-antitoxin pair type II binding - - - 0.0000209 51.0
LYD1_k127_2064799_8 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002596 545.0
LYD1_k127_2064799_9 PFAM DAHP synthetase I KDSA K03856 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002079 526.0
LYD1_k127_2105018_0 TIGRFAM DNA polymerase III, alpha subunit K02337 - 2.7.7.7 0.0 1556.0
LYD1_k127_2105018_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0 1498.0
LYD1_k127_2105018_10 Phosphofructokinase K21071 - 2.7.1.11,2.7.1.90 5.994e-203 637.0
LYD1_k127_2105018_100 coenzyme F420 binding K07226,K09979 - - 0.000000000000000001402 91.0
LYD1_k127_2105018_101 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.000000000000000001558 87.0
LYD1_k127_2105018_103 PFAM glycoside hydrolase family 10 - - - 0.000000000000000003913 95.0
LYD1_k127_2105018_104 Transposase IS200 like - - - 0.0000000000000001012 80.0
LYD1_k127_2105018_105 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000002815 78.0
LYD1_k127_2105018_106 Domain of unknown function (DUF333) K14475 - - 0.0000000000000006939 88.0
LYD1_k127_2105018_107 - - - - 0.0000000000000007036 79.0
LYD1_k127_2105018_108 beta-galactosidase activity K15924 - 3.2.1.136 0.0000000000005737 81.0
LYD1_k127_2105018_11 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 7.199e-199 631.0
LYD1_k127_2105018_110 Sodium/hydrogen exchanger family K03455 - - 0.000000008416 68.0
LYD1_k127_2105018_111 nucleotidyltransferase activity K01154,K07076,K18842 - 3.1.21.3 0.00000001946 62.0
LYD1_k127_2105018_112 domain, Protein - - - 0.000002143 59.0
LYD1_k127_2105018_113 metal-dependent membrane protease K07052 - - 0.000005545 57.0
LYD1_k127_2105018_115 - - - - 0.00001608 50.0
LYD1_k127_2105018_116 PBS lyase HEAT-like repeat - - - 0.0002446 53.0
LYD1_k127_2105018_12 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005281 600.0
LYD1_k127_2105018_13 PhoQ Sensor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 653.0
LYD1_k127_2105018_14 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003226 601.0
LYD1_k127_2105018_15 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000536 579.0
LYD1_k127_2105018_16 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002713 581.0
LYD1_k127_2105018_17 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004052 526.0
LYD1_k127_2105018_18 PFAM Major Facilitator Superfamily K03292 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003921 509.0
LYD1_k127_2105018_19 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002151 495.0
LYD1_k127_2105018_2 Alpha-mannosidase K01191 - 3.2.1.24 0.0 1106.0
LYD1_k127_2105018_20 GTPase that plays an essential role in the late steps of ribosome biogenesis K00058,K03977 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 496.0
LYD1_k127_2105018_21 PFAM IstB domain protein ATP-binding protein K02315 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002647 489.0
LYD1_k127_2105018_22 Multicopper oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001902 486.0
LYD1_k127_2105018_23 SMART Nucleotide binding protein, PINc - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 457.0
LYD1_k127_2105018_24 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033,K12369 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 449.0
LYD1_k127_2105018_25 Adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 431.0
LYD1_k127_2105018_26 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000209 432.0
LYD1_k127_2105018_27 Multicopper K04753 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003205 436.0
LYD1_k127_2105018_28 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002339 415.0
LYD1_k127_2105018_29 Glycosyl hydrolase 36 superfamily, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007329 441.0
LYD1_k127_2105018_3 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1034.0
LYD1_k127_2105018_30 PFAM Alcohol dehydrogenase zinc-binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 409.0
LYD1_k127_2105018_31 N-acetylglucosaminylinositol deacetylase activity K01463 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005215 406.0
LYD1_k127_2105018_32 ATPases associated with a variety of cellular activities K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001875 399.0
LYD1_k127_2105018_33 PFAM Adenosine AMP deaminase K01488 - 3.5.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001926 401.0
LYD1_k127_2105018_34 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002824 401.0
LYD1_k127_2105018_35 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005252 383.0
LYD1_k127_2105018_36 PFAM heat shock protein DnaJ domain protein K05516 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007538 381.0
LYD1_k127_2105018_37 PFAM Archaeal ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006337 379.0
LYD1_k127_2105018_38 PFAM Methyltransferase type 11 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002455 352.0
LYD1_k127_2105018_39 (Rhomboid) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007476 349.0
LYD1_k127_2105018_4 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 6.89e-318 977.0
LYD1_k127_2105018_40 TIGRFAM LAO AO transport system ATPase K07588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008624 346.0
LYD1_k127_2105018_41 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 - 2.7.7.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004812 337.0
LYD1_k127_2105018_42 PFAM Archaeal ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006737 348.0
LYD1_k127_2105018_43 PhoQ Sensor K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004665 340.0
LYD1_k127_2105018_44 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002876 326.0
LYD1_k127_2105018_45 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009479 328.0
LYD1_k127_2105018_46 Ribosomal protein L11 methyltransferase K02687 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002334 327.0
LYD1_k127_2105018_47 DNA polymerase alpha chain like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005686 339.0
LYD1_k127_2105018_48 ATPases associated with a variety of cellular activities K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002071 325.0
LYD1_k127_2105018_49 PFAM YbbR family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002397 330.0
LYD1_k127_2105018_5 Heat shock 70 kDa protein K04043 - - 2.077e-314 972.0
LYD1_k127_2105018_50 Belongs to the peptidase S8 family K14645 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000202 293.0
LYD1_k127_2105018_51 PFAM aldo keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004719 287.0
LYD1_k127_2105018_52 Zinc-binding dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000125 291.0
LYD1_k127_2105018_53 PFAM binding-protein-dependent transport systems inner membrane component K02025,K05814,K10118,K10237,K10241,K15771,K17235,K17316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009504 287.0
LYD1_k127_2105018_54 PFAM binding-protein-dependent transport systems inner membrane component K02026,K05815 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003284 269.0
LYD1_k127_2105018_55 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 - 4.1.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000001997 260.0
LYD1_k127_2105018_56 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008424 243.0
LYD1_k127_2105018_57 Cupin domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000009132 233.0
LYD1_k127_2105018_58 Transport permease protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000132 249.0
LYD1_k127_2105018_59 Bifunctional nuclease K08999 - - 0.000000000000000000000000000000000000000000000000000000000000004114 224.0
LYD1_k127_2105018_6 Belongs to the peptidase S8 family - - - 1.336e-307 967.0
LYD1_k127_2105018_60 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 2.5.1.129 0.00000000000000000000000000000000000000000000000000000000000002743 221.0
LYD1_k127_2105018_61 serine-type endopeptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000002979 223.0
LYD1_k127_2105018_62 Catechol dioxygenase N terminus K03381 - 1.13.11.1 0.0000000000000000000000000000000000000000000000000000000000001741 221.0
LYD1_k127_2105018_63 PFAM cobalamin B12-binding domain protein K01849 - 5.4.99.2 0.0000000000000000000000000000000000000000000000000000000000006117 212.0
LYD1_k127_2105018_64 alcohol dehydrogenase K08322 - 1.1.1.380 0.000000000000000000000000000000000000000000000000000000000001269 222.0
LYD1_k127_2105018_65 PFAM GCN5-related N-acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000004692 211.0
LYD1_k127_2105018_66 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000001239 221.0
LYD1_k127_2105018_67 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000001237 206.0
LYD1_k127_2105018_68 transcriptional regulator, Rrf2 family - - - 0.000000000000000000000000000000000000000000000000000001256 195.0
LYD1_k127_2105018_69 N-terminal TM domain of oligopeptide transport permease C K15582 - - 0.0000000000000000000000000000000000000000000000000008704 194.0
LYD1_k127_2105018_7 ATP-dependent transcriptional regulator, MalT-like, LuxR family K03556 - - 1.643e-250 806.0
LYD1_k127_2105018_70 oligopeptide transport system permease protein OppB K15581 - - 0.000000000000000000000000000000000000000000000000496 188.0
LYD1_k127_2105018_71 Putative esterase - - - 0.000000000000000000000000000000000000000000000001706 183.0
LYD1_k127_2105018_72 PFAM NUDIX hydrolase K01515 - 3.6.1.13 0.000000000000000000000000000000000000000000000003474 179.0
LYD1_k127_2105018_73 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.00000000000000000000000000000000000000000000001565 177.0
LYD1_k127_2105018_74 PKD domain - - - 0.000000000000000000000000000000000000000000006378 188.0
LYD1_k127_2105018_75 Hemerythrin HHE cation binding domain - - - 0.00000000000000000000000000000000000000003847 158.0
LYD1_k127_2105018_76 - - - - 0.00000000000000000000000000000000000000004677 155.0
LYD1_k127_2105018_77 nucleic acid-binding protein contains PIN domain K07062 - - 0.0000000000000000000000000000000000000001653 153.0
LYD1_k127_2105018_78 TIGRFAM primosome, DnaD subunit - - - 0.000000000000000000000000000000000000008864 154.0
LYD1_k127_2105018_79 aldo keto reductase K05882 - 1.1.1.91 0.00000000000000000000000000000000000002451 147.0
LYD1_k127_2105018_8 ABC-type dipeptide transport system, periplasmic component K02035,K12368 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006457,GO:0006810,GO:0006857,GO:0008150,GO:0009987,GO:0015833,GO:0020037,GO:0030288,GO:0030313,GO:0031975,GO:0033218,GO:0042277,GO:0042597,GO:0042886,GO:0042938,GO:0044464,GO:0046906,GO:0048037,GO:0051179,GO:0051234,GO:0061077,GO:0071702,GO:0071705,GO:0097159,GO:1901363 - 1.43e-214 681.0
LYD1_k127_2105018_80 peptidase activity - - - 0.0000000000000000000000000000000000001624 154.0
LYD1_k127_2105018_81 - - - - 0.0000000000000000000000000000000000001803 144.0
LYD1_k127_2105018_82 Bacterial extracellular solute-binding protein K02027 - - 0.0000000000000000000000000000000000004632 156.0
LYD1_k127_2105018_83 DNA-binding transcription factor activity K03892 - - 0.0000000000000000000000000000000000131 138.0
LYD1_k127_2105018_84 LysM domain K07273,K22278 - 3.5.1.104 0.00000000000000000000000000000000006762 142.0
LYD1_k127_2105018_85 helix_turn_helix, cAMP Regulatory protein K10914 - - 0.00000000000000000000000000000000007235 142.0
LYD1_k127_2105018_86 Transmembrane secretion effector - - - 0.000000000000000000000000000000002192 148.0
LYD1_k127_2105018_87 GAF domain - - - 0.000000000000000000000000000000002903 139.0
LYD1_k127_2105018_88 Thioredoxin - - - 0.00000000000000000000000000000007645 129.0
LYD1_k127_2105018_89 belongs to the sigma-70 factor family, ECF subfamily K03088 - - 0.00000000000000000000000000000009479 131.0
LYD1_k127_2105018_9 ROK family K00845,K13967,K19979,K20433 - 2.7.1.188,2.7.1.2,2.7.1.214,2.7.1.60,5.1.3.9 8.811e-204 643.0
LYD1_k127_2105018_90 HEPN domain - - - 0.000000000000000000000000000001986 124.0
LYD1_k127_2105018_91 Transposase IS200 like - - - 0.000000000000000000000000000002555 124.0
LYD1_k127_2105018_92 Glycosyltransferase family 20 K03692 - 2.4.1.213 0.000000000000000000000000000003394 129.0
LYD1_k127_2105018_93 peptidase activity - - - 0.00000000000000000000000000001326 133.0
LYD1_k127_2105018_94 - - - - 0.00000000000000000000000000003141 124.0
LYD1_k127_2105018_95 Transcriptional regulator - - - 0.0000000000000000000000007839 119.0
LYD1_k127_2105018_96 Cytochrome C oxidase, cbb3-type, subunit III K02275 - 1.9.3.1 0.00000000000000000000004802 105.0
LYD1_k127_2105018_97 Histidine kinase A domain protein - - - 0.00000000000000000008891 93.0
LYD1_k127_2105018_99 Dodecin K09165 - - 0.0000000000000000006991 87.0
LYD1_k127_2106898_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 2065.0
LYD1_k127_2106898_1 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1074.0
LYD1_k127_2106898_10 PFAM glycosyl transferase, family 51 - - - 1.422e-201 661.0
LYD1_k127_2106898_100 TIGRFAM glutaredoxin-like domain protein - - - 0.0000000000000000000000001438 107.0
LYD1_k127_2106898_102 Beta-lactamase K17836 - 3.5.2.6 0.0000000000000000000000004726 121.0
LYD1_k127_2106898_103 alpha beta - - - 0.000000000000000000000000522 114.0
LYD1_k127_2106898_104 Putative zinc-finger - - - 0.0000000000000000000003409 98.0
LYD1_k127_2106898_107 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000001341 79.0
LYD1_k127_2106898_108 Psort location Cytoplasmic, score 8.96 - - - 0.00000000000000041 82.0
LYD1_k127_2106898_109 - - - - 0.00000000000002565 77.0
LYD1_k127_2106898_11 CoA binding domain K09181 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005121 604.0
LYD1_k127_2106898_110 hmm pf01594 - - - 0.00000000000002997 85.0
LYD1_k127_2106898_113 AntiSigma factor - - - 0.00000001108 66.0
LYD1_k127_2106898_114 extracellular polysaccharide biosynthetic process - - - 0.000005074 57.0
LYD1_k127_2106898_115 YhhN family - - - 0.00001934 48.0
LYD1_k127_2106898_116 gas vesicle protein - - - 0.0008835 45.0
LYD1_k127_2106898_12 Formiminotransferase domain, N-terminal subdomain K00603,K13990 - 2.1.2.5,4.3.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 590.0
LYD1_k127_2106898_13 LysM domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001732 576.0
LYD1_k127_2106898_14 N-terminal 7TM region of histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003189 580.0
LYD1_k127_2106898_15 PFAM TPR repeat-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002145 570.0
LYD1_k127_2106898_16 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 - 2.9.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008538 542.0
LYD1_k127_2106898_17 LysM domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001534 541.0
LYD1_k127_2106898_18 PFAM glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000374 528.0
LYD1_k127_2106898_19 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003757 503.0
LYD1_k127_2106898_2 PFAM glycosyl transferase, family 35 K00688 - 2.4.1.1 1e-322 1000.0
LYD1_k127_2106898_20 Polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008126 497.0
LYD1_k127_2106898_21 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001887 500.0
LYD1_k127_2106898_23 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0019538,GO:0043170,GO:0044238,GO:0071704,GO:1901564 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000415 489.0
LYD1_k127_2106898_24 Heparinase II/III-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006484 505.0
LYD1_k127_2106898_25 PFAM major facilitator superfamily MFS_1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007282 482.0
LYD1_k127_2106898_26 Trypsin K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000503 486.0
LYD1_k127_2106898_27 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006172,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009133,GO:0009135,GO:0009136,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009179,GO:0009180,GO:0009185,GO:0009188,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016311,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030312,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046031,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090304,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990837 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 480.0
LYD1_k127_2106898_28 aromatic amino acid beta-eliminating lyase threonine aldolase K01620 - 4.1.2.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002216 473.0
LYD1_k127_2106898_29 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 481.0
LYD1_k127_2106898_3 Heat shock 70 kDa protein K04043 - - 3.05e-297 923.0
LYD1_k127_2106898_30 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002182 475.0
LYD1_k127_2106898_31 LysM domain K03046,K03641,K08642 - 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000347 476.0
LYD1_k127_2106898_32 Metallopeptidase family M24 K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008624 470.0
LYD1_k127_2106898_33 PFAM Extracellular ligand-binding receptor K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007012 455.0
LYD1_k127_2106898_34 peptidase M29 aminopeptidase II K19689 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002756 452.0
LYD1_k127_2106898_35 Responsible for synthesis of pseudouridine from uracil K06180 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003714 445.0
LYD1_k127_2106898_36 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009241 436.0
LYD1_k127_2106898_37 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 397.0
LYD1_k127_2106898_38 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004124 385.0
LYD1_k127_2106898_39 Uncharacterized protein conserved in bacteria (DUF2179) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009791 376.0
LYD1_k127_2106898_4 PFAM Alcohol dehydrogenase zinc-binding domain protein - - - 5.695e-273 858.0
LYD1_k127_2106898_40 TIGRFAM iron-sulfur cluster binding protein K18929 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006933 392.0
LYD1_k127_2106898_41 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001411 364.0
LYD1_k127_2106898_42 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001464 362.0
LYD1_k127_2106898_43 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002305 361.0
LYD1_k127_2106898_44 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002665 357.0
LYD1_k127_2106898_45 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 349.0
LYD1_k127_2106898_46 2-hydroxy-3-oxopropionate reductase K00042 - 1.1.1.60 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004208 354.0
LYD1_k127_2106898_47 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004916 341.0
LYD1_k127_2106898_48 PFAM ABC transporter related K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 335.0
LYD1_k127_2106898_49 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002221 335.0
LYD1_k127_2106898_5 VWA domain containing CoxE-like protein K07114 - - 6.58e-241 769.0
LYD1_k127_2106898_50 ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006196 328.0
LYD1_k127_2106898_51 Peptidoglycan-binding LysM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002851 329.0
LYD1_k127_2106898_52 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003525 329.0
LYD1_k127_2106898_53 PFAM peptidase C60, sortase A and B K07284 - 3.4.22.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000456 323.0
LYD1_k127_2106898_54 PFAM ABC transporter related K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006128 323.0
LYD1_k127_2106898_55 rRNA (adenine-N6,N6-)-dimethyltransferase activity K00561,K02528 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182,2.1.1.184 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004123 317.0
LYD1_k127_2106898_56 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007817 322.0
LYD1_k127_2106898_57 PFAM RNA binding S1 domain protein K02945,K03527 - 1.17.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000691 312.0
LYD1_k127_2106898_58 pfkB family carbohydrate kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005912 310.0
LYD1_k127_2106898_59 Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate K01497 - 3.5.4.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002452 272.0
LYD1_k127_2106898_6 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576 2.7.7.7 9.468e-218 707.0
LYD1_k127_2106898_60 Fe-S oxidoreductase K18928 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002507 263.0
LYD1_k127_2106898_61 PhoQ Sensor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005556 264.0
LYD1_k127_2106898_62 ABC-2 family transporter protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006004 254.0
LYD1_k127_2106898_63 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.0000000000000000000000000000000000000000000000000000000000000000000001967 253.0
LYD1_k127_2106898_64 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464 2.1.1.297 0.0000000000000000000000000000000000000000000000000000000000000000000006037 247.0
LYD1_k127_2106898_65 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.000000000000000000000000000000000000000000000000000000000000000000001532 239.0
LYD1_k127_2106898_66 PFAM Translin K07477 - - 0.000000000000000000000000000000000000000000000000000000000000000000005266 240.0
LYD1_k127_2106898_67 sigma-70 region 2 domain protein K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000001955 241.0
LYD1_k127_2106898_68 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000001849 237.0
LYD1_k127_2106898_69 DNA methylase - - - 0.000000000000000000000000000000000000000000000000000000000000000002266 235.0
LYD1_k127_2106898_7 Immune inhibitor A peptidase M6 - - - 1.116e-216 692.0
LYD1_k127_2106898_70 glycolate biosynthetic process K01091 - 3.1.3.18 0.000000000000000000000000000000000000000000000000000000000000000009917 231.0
LYD1_k127_2106898_71 PFAM DUF218 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000002137 229.0
LYD1_k127_2106898_72 Zn peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000288 229.0
LYD1_k127_2106898_73 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000003482 214.0
LYD1_k127_2106898_74 2-dehydropantoate 2-reductase activity K00077 - 1.1.1.169 0.000000000000000000000000000000000000000000000000000000000006379 218.0
LYD1_k127_2106898_75 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K01497,K14652 - 3.5.4.25,4.1.99.12 0.00000000000000000000000000000000000000000000000000000000002953 214.0
LYD1_k127_2106898_76 2-dehydro-3-deoxyphosphogluconate aldolase K01625 - 4.1.2.14,4.1.3.42 0.00000000000000000000000000000000000000000000000000000000003487 212.0
LYD1_k127_2106898_77 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0000000000000000000000000000000000000000000000000000000001608 216.0
LYD1_k127_2106898_78 PFAM sigma-70 region 2 domain protein K03088 - - 0.0000000000000000000000000000000000000000000000000000001574 201.0
LYD1_k127_2106898_79 PFAM sigma-70 region 2 domain protein K03088 - - 0.0000000000000000000000000000000000000000000000000000002895 199.0
LYD1_k127_2106898_8 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 1.462e-211 663.0
LYD1_k127_2106898_80 PFAM OsmC family protein K07397 - - 0.00000000000000000000000000000000000000000000000000001556 191.0
LYD1_k127_2106898_81 TIGRFAM glutaredoxin-like domain protein - - - 0.0000000000000000000000000000000000000000000000000002552 189.0
LYD1_k127_2106898_82 Polymer-forming cytoskeletal - - - 0.00000000000000000000000000000000000000000000000001927 198.0
LYD1_k127_2106898_83 synthase K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000000000000000002516 173.0
LYD1_k127_2106898_84 pfkB family carbohydrate kinase K00874 - 2.7.1.45 0.00000000000000000000000000000000000000000000002686 184.0
LYD1_k127_2106898_85 Involved in the tonB-independent uptake of proteins - - - 0.00000000000000000000000000000000000000000000003248 183.0
LYD1_k127_2106898_86 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.00000000000000000000000000000000000000000000007019 173.0
LYD1_k127_2106898_87 Domain of unknown function DUF83 K07464 - 3.1.12.1 0.0000000000000000000000000000000000000000000001725 173.0
LYD1_k127_2106898_88 Telomere recombination K07566 - 2.7.7.87 0.0000000000000000000000000000000000000000000004629 173.0
LYD1_k127_2106898_89 - - - - 0.00000000000000000000000000000000000000000005929 171.0
LYD1_k127_2106898_9 May be involved in recombinational repair of damaged DNA K03631 - - 4.51e-208 661.0
LYD1_k127_2106898_90 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.0000000000000000000000000000000000000000004701 163.0
LYD1_k127_2106898_91 -O-antigen - - - 0.0000000000000000000000000000000000000003046 165.0
LYD1_k127_2106898_92 - - - - 0.0000000000000000000000000000000000000005537 158.0
LYD1_k127_2106898_93 Type IV pilus biogenesis stability protein PilW - - - 0.000000000000000000000000000000000000003521 154.0
LYD1_k127_2106898_94 acetyltransferase K06889,K19273 - - 0.00000000000000000000000000000000000005771 149.0
LYD1_k127_2106898_95 SLBB domain K02237 - - 0.000000000000000000000000000000000001755 145.0
LYD1_k127_2106898_97 Sigma-70 region 2 K03088 - - 0.000000000000000000000000001477 119.0
LYD1_k127_2106898_98 Domain of unknown function DUF123 - - - 0.000000000000000000000000008814 116.0
LYD1_k127_2106898_99 AntiSigma factor - - - 0.00000000000000000000000009694 121.0
LYD1_k127_2182464_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 2.439e-275 855.0
LYD1_k127_2182464_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 2.618e-254 790.0
LYD1_k127_2182464_10 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007337 329.0
LYD1_k127_2182464_11 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 323.0
LYD1_k127_2182464_12 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008861 302.0
LYD1_k127_2182464_13 Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA K07442 - 2.1.1.219,2.1.1.220 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001657 306.0
LYD1_k127_2182464_14 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001787 305.0
LYD1_k127_2182464_15 PFAM Haloacid dehalogenase domain protein hydrolase K01101 - 3.1.3.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004882 287.0
LYD1_k127_2182464_16 Glycosyl transferase, family 4 K02851 - 2.7.8.33,2.7.8.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006135 289.0
LYD1_k127_2182464_17 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007285 282.0
LYD1_k127_2182464_18 PFAM Glycosyl transferase, group 1 K08256 - 2.4.1.345 0.000000000000000000000000000000000000000000000000000000000000000000000000000003873 276.0
LYD1_k127_2182464_19 PFAM glycosyl transferase group 1 K12995,K13668 - 2.4.1.346,2.4.1.348 0.00000000000000000000000000000000000000000000000000000000000000000000000000004459 272.0
LYD1_k127_2182464_2 -O-antigen - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002623 639.0
LYD1_k127_2182464_20 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000192 265.0
LYD1_k127_2182464_21 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001772 255.0
LYD1_k127_2182464_22 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.000000000000000000000000000000000000000000000000000000000000006905 220.0
LYD1_k127_2182464_23 Glycosyl transferase 4-like - - - 0.0000000000000000000000000000000000000000000000000000000006022 217.0
LYD1_k127_2182464_24 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.0000000000000000000000000000000000000000000000000000000007536 209.0
LYD1_k127_2182464_25 lipid binding - - - 0.00000000000000000000000000000000000000000000000000001234 200.0
LYD1_k127_2182464_26 transposase activity - - - 0.00000000000000000000000000000000000000000000000000634 196.0
LYD1_k127_2182464_27 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 GO:0000217,GO:0000400,GO:0000724,GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003824,GO:0004386,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007154,GO:0008150,GO:0008152,GO:0009314,GO:0009378,GO:0009379,GO:0009432,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0022607,GO:0031668,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0033554,GO:0034641,GO:0042802,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051259,GO:0051260,GO:0051262,GO:0051276,GO:0051289,GO:0051716,GO:0065003,GO:0071103,GO:0071496,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1902494 3.6.4.12 0.00000000000000000000000000000000000000000000001531 178.0
LYD1_k127_2182464_28 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000000000000000000000000000000007114 172.0
LYD1_k127_2182464_29 PFAM NUDIX hydrolase - - - 0.000000000000000000000000000000000000000000003717 171.0
LYD1_k127_2182464_3 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005196 467.0
LYD1_k127_2182464_30 methyltransferase - - - 0.0000000000000000000000000000000007387 140.0
LYD1_k127_2182464_31 Membrane protein involved in the export of O-antigen and teichoic acid K03328 - - 0.00000000000000000000000004266 124.0
LYD1_k127_2182464_32 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.000000006295 68.0
LYD1_k127_2182464_4 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007845 452.0
LYD1_k127_2182464_5 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 466.0
LYD1_k127_2182464_6 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004765 443.0
LYD1_k127_2182464_7 aminopeptidase activity K01179 - 3.2.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003639 401.0
LYD1_k127_2182464_8 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001233 379.0
LYD1_k127_2182464_9 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002182 368.0
LYD1_k127_2220067_0 ABC transporter transmembrane region - - - 7.799e-225 713.0
LYD1_k127_2220067_1 (ABC) transporter K06147 - - 5.131e-216 686.0
LYD1_k127_2220067_10 Binding-protein-dependent transport system inner membrane component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002555 299.0
LYD1_k127_2220067_11 UTRA K03710 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001047 279.0
LYD1_k127_2220067_12 transferase activity, transferring glycosyl groups K02844 GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008194,GO:0008610,GO:0008653,GO:0008919,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0035251,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0046401,GO:0046527,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001058 283.0
LYD1_k127_2220067_13 Binding-protein-dependent transport system inner membrane component K02026,K05815,K10119 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000157 278.0
LYD1_k127_2220067_14 Glycosyl transferase, family 2 K00786 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002859 270.0
LYD1_k127_2220067_15 Hep Hag repeat protein K19231,K19233,K21449 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000635 267.0
LYD1_k127_2220067_16 myo-inosose-2 dehydratase activity K01805,K03079 - 5.1.3.22,5.3.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000001031 251.0
LYD1_k127_2220067_17 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.000000000000000000000000000000000000000000000000000000000000002219 229.0
LYD1_k127_2220067_18 PFAM oxidoreductase domain protein - - - 0.000000000000000000000000000000000000000000000000000000009162 211.0
LYD1_k127_2220067_19 Hep Hag repeat protein K01181,K19233,K20276,K21449 - 3.2.1.8 0.0000000000000000000000000000000000000145 152.0
LYD1_k127_2220067_2 BNR/Asp-box repeat - - - 7.876e-210 655.0
LYD1_k127_2220067_20 transferase activity, transferring glycosyl groups K02844 GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008194,GO:0008610,GO:0008653,GO:0008919,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0035251,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0046401,GO:0046527,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 - 0.000000000000000000000000000000000003375 139.0
LYD1_k127_2220067_21 Mo-molybdopterin cofactor metabolic process K03636,K21147 - 2.7.7.80,2.8.1.11 0.0000000000000000000000000000001313 126.0
LYD1_k127_2220067_22 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K08234 - - 0.0000000000000000000000000000001366 135.0
LYD1_k127_2220067_24 family 25 K01185,K07273 GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 3.2.1.17 0.00000008543 63.0
LYD1_k127_2220067_25 transcriptional regulator - - - 0.000001308 57.0
LYD1_k127_2220067_26 FtsZ-dependent cytokinesis - - - 0.00003243 50.0
LYD1_k127_2220067_3 PFAM glycoside hydrolase, family 1 K05350 - 3.2.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 523.0
LYD1_k127_2220067_4 Hep Hag repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000484 441.0
LYD1_k127_2220067_5 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003895 406.0
LYD1_k127_2220067_6 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001801 330.0
LYD1_k127_2220067_7 Bacterial extracellular solute-binding protein K02027 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002251 333.0
LYD1_k127_2220067_8 beta-galactosidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001227 316.0
LYD1_k127_2220067_9 Xylose isomerase-like TIM barrel K18910 GO:0003674,GO:0003824,GO:0005488,GO:0016853,GO:0016854,GO:0016857,GO:0030145,GO:0043167,GO:0043169,GO:0046872,GO:0046914,GO:0050897 5.1.3.30,5.1.3.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001616 307.0
LYD1_k127_2241367_0 TIGRFAM cysteine desulfurase family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 516.0
LYD1_k127_2241367_1 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000002884 180.0
LYD1_k127_2241367_2 Protein of unknown function DUF89 - - - 0.000000000000000000000007699 106.0
LYD1_k127_224588_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1401.0
LYD1_k127_224588_1 DEAD DEAH box helicase domain protein K06877 - - 1.361e-300 944.0
LYD1_k127_224588_10 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004204 258.0
LYD1_k127_224588_12 Patatin-like phospholipase K07001 GO:0003674,GO:0003824,GO:0016787 - 0.0000000000000000000000000000000000000000000000008649 187.0
LYD1_k127_224588_13 aldo keto reductase - - - 0.000000000000000000000000000000004205 143.0
LYD1_k127_224588_14 HEPN domain - - - 0.00000000000000000000000003726 112.0
LYD1_k127_224588_2 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 7.527e-267 844.0
LYD1_k127_224588_3 SMART alpha amylase catalytic sub domain K01187,K05343 - 3.2.1.1,3.2.1.20,5.4.99.16 7.015e-222 702.0
LYD1_k127_224588_4 Aldo/keto reductase family K07079 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003583 439.0
LYD1_k127_224588_5 VIT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007594 419.0
LYD1_k127_224588_6 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002044 394.0
LYD1_k127_224588_7 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009358 290.0
LYD1_k127_224588_8 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002931 275.0
LYD1_k127_224588_9 lipid binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000385 253.0
LYD1_k127_226215_0 glycoside hydrolase family 2 sugar binding K01192 - 3.2.1.25 0.0 1086.0
LYD1_k127_226215_1 Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 - 3.4.21.26 4.132e-287 900.0
LYD1_k127_226215_10 PFAM glycosidase PH1107-related K18785,K20885 - 2.4.1.319,2.4.1.320,2.4.1.339,2.4.1.340 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002164 507.0
LYD1_k127_226215_11 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001564 472.0
LYD1_k127_226215_12 COG1404 Subtilisin-like serine proteases K14645 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006893 440.0
LYD1_k127_226215_13 carbohydrate transport K02027 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004151 441.0
LYD1_k127_226215_14 peptidase U32 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000498 410.0
LYD1_k127_226215_15 PFAM binding-protein-dependent transport systems inner membrane component K02025 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002716 402.0
LYD1_k127_226215_16 carbohydrate transport K10117 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005257 399.0
LYD1_k127_226215_17 Uroporphyrinogen decarboxylase (URO-D) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002749 383.0
LYD1_k127_226215_18 PFAM ABC transporter related - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006537 350.0
LYD1_k127_226215_19 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 351.0
LYD1_k127_226215_2 FtsX-like permease family K02004 - - 4.588e-256 820.0
LYD1_k127_226215_20 PFAM binding-protein-dependent transport systems inner membrane component K02026 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002965 341.0
LYD1_k127_226215_21 transmembrane transport K02025,K05814,K10118,K10237,K10241,K15771,K17235,K17316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003227 341.0
LYD1_k127_226215_22 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001726 337.0
LYD1_k127_226215_23 transposase activity K07493 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 334.0
LYD1_k127_226215_24 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002854 330.0
LYD1_k127_226215_25 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002528 319.0
LYD1_k127_226215_26 glycerophosphodiester transmembrane transport K10119 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001635 317.0
LYD1_k127_226215_27 Short-chain dehydrogenase reductase sDR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 311.0
LYD1_k127_226215_28 TIGRFAM RarD protein, DMT superfamily transporter K05786 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006815 311.0
LYD1_k127_226215_29 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002359 304.0
LYD1_k127_226215_3 ABC transporter, ATP-binding protein - - - 1.11e-246 774.0
LYD1_k127_226215_30 Belongs to the MT-A70-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003823 289.0
LYD1_k127_226215_31 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000994 297.0
LYD1_k127_226215_32 secretion protein HlyD family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002028 283.0
LYD1_k127_226215_33 Uroporphyrinogen decarboxylase (URO-D) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008315 282.0
LYD1_k127_226215_34 Inner membrane component of T3SS, cytoplasmic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002301 286.0
LYD1_k127_226215_35 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006577 259.0
LYD1_k127_226215_36 PFAM ABC transporter related K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001141 253.0
LYD1_k127_226215_37 CHAT domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002683 254.0
LYD1_k127_226215_38 Acetyltransferase (GNAT) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000007454 246.0
LYD1_k127_226215_39 Restriction endonuclease BglII - - - 0.00000000000000000000000000000000000000000000000000000000000000002349 226.0
LYD1_k127_226215_4 Multicopper oxidase K08100 - 1.3.3.5 9.683e-226 719.0
LYD1_k127_226215_40 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000002322 217.0
LYD1_k127_226215_42 PFAM Glyoxalase bleomycin resistance protein dioxygenase K04750 - - 0.000000000000000000000000000000000000000000000000000000000116 206.0
LYD1_k127_226215_43 Protein of unknown function (DUF4038) - - - 0.00000000000000000000000000000000000000000000000000000004974 211.0
LYD1_k127_226215_44 Alpha beta - - - 0.00000000000000000000000000000000000000000000000000000007524 205.0
LYD1_k127_226215_45 CHAT domain - - - 0.00000000000000000000000000000000000000000000000000001022 208.0
LYD1_k127_226215_46 N-acetylglucosamine kinase activity - - - 0.00000000000000000000000000000000000000000000000000004362 202.0
LYD1_k127_226215_47 Belongs to the P(II) protein family K04751 - - 0.000000000000000000000000000000000000000000000000009031 184.0
LYD1_k127_226215_48 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000001708 188.0
LYD1_k127_226215_49 3-demethylubiquinone-9 3-O-methyltransferase activity K00568 - 2.1.1.222,2.1.1.64 0.0000000000000000000000000000000000000000000000000891 186.0
LYD1_k127_226215_5 FAD dependent oxidoreductase - - - 7.98e-216 708.0
LYD1_k127_226215_50 4Fe-4S single cluster domain - - - 0.0000000000000000000000000000000000000000000000001553 182.0
LYD1_k127_226215_51 - - - - 0.0000000000000000000000000000000000000000000000006005 188.0
LYD1_k127_226215_52 DinB family - - - 0.000000000000000000000000000000000000000000000009304 177.0
LYD1_k127_226215_53 4Fe-4S single cluster domain - - - 0.0000000000000000000000000000000000000000000001091 183.0
LYD1_k127_226215_54 PFAM GCN5-related N-acetyltransferase - - - 0.0000000000000000000000000000000000000000000005936 179.0
LYD1_k127_226215_55 - - - - 0.000000000000000000000000000000000000000000008672 169.0
LYD1_k127_226215_56 transferase activity, transferring acyl groups K15520 - 2.3.1.189 0.0000000000000000000000000000000000000000003023 163.0
LYD1_k127_226215_57 - - - - 0.000000000000000000000000000000000000000002587 165.0
LYD1_k127_226215_58 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000008559 148.0
LYD1_k127_226215_59 - - - - 0.000000000000000000000000000000000001244 156.0
LYD1_k127_226215_6 AAA ATPase domain - - - 3.999e-214 711.0
LYD1_k127_226215_60 glycoside hydrolase, family K07273 - - 0.0000000000000000000000000000000004788 154.0
LYD1_k127_226215_61 adenosine 5'-monophosphoramidase activity - - - 0.0000000000000000000000000000000005204 138.0
LYD1_k127_226215_62 Proteins of 100 residues with WXG - - - 0.0000000000000000000000000000004938 134.0
LYD1_k127_226215_63 inositol 2-dehydrogenase activity - - - 0.0000000000000000000000000000005056 136.0
LYD1_k127_226215_64 4Fe-4S single cluster domain - - - 0.000000000000000000000000121 110.0
LYD1_k127_226215_65 COG2346, Truncated hemoglobins K03086,K06867,K06886 - - 0.0000000000000000000000002435 118.0
LYD1_k127_226215_66 Stress responsive A/B Barrel Domain - - - 0.000000000000000000000002197 108.0
LYD1_k127_226215_67 PFAM Integrase core domain K07497 - - 0.0000000000000000001931 94.0
LYD1_k127_226215_68 PFAM Transposase DDE domain - - - 0.000000000000000001782 88.0
LYD1_k127_226215_69 MULE transposase domain - - - 0.000000000000000005008 85.0
LYD1_k127_226215_7 Transcriptional activator domain - - - 2.566e-210 694.0
LYD1_k127_226215_70 blue (type 1) copper K00368 - 1.7.2.1 0.00000000000000006245 88.0
LYD1_k127_226215_71 Phosphotransferase enzyme family K17880 - 2.7.1.119 0.000000000000000522 89.0
LYD1_k127_226215_72 Involved in the TonB-independent uptake of proteins K03641 - - 0.000000000000006419 90.0
LYD1_k127_226215_73 NUDIX domain - - - 0.00000000000001231 84.0
LYD1_k127_226215_74 PFAM Transposase IS3 IS911 K07497 - - 0.0000000000005808 79.0
LYD1_k127_226215_75 Coenzyme PQQ synthesis protein D (PqqD) - - - 0.00000000000141 78.0
LYD1_k127_226215_76 Uroporphyrinogen decarboxylase (URO-D) - - - 0.000000000002363 78.0
LYD1_k127_226215_77 FecR protein - - - 0.00000000006172 74.0
LYD1_k127_226215_78 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000004011 59.0
LYD1_k127_226215_79 SIS domain K02082 - - 0.000000007373 68.0
LYD1_k127_226215_8 WD domain, G-beta repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007799 657.0
LYD1_k127_226215_80 Restriction endonuclease BglII - - - 0.00000002885 56.0
LYD1_k127_226215_81 4Fe-4S single cluster domain - - - 0.00000003252 56.0
LYD1_k127_226215_83 Acetyltransferase (GNAT) domain - - - 0.0000004144 53.0
LYD1_k127_226215_84 Inorganic pyrophosphatase - - - 0.000001674 49.0
LYD1_k127_226215_85 - - - - 0.000007308 50.0
LYD1_k127_226215_86 PFAM Peptidase M23 - - - 0.00001428 58.0
LYD1_k127_226215_87 LamG domain protein jellyroll fold domain protein - - - 0.00001871 57.0
LYD1_k127_226215_88 - - - - 0.00002569 47.0
LYD1_k127_226215_89 SPTR B0JRC2 Transposase - - - 0.0002425 44.0
LYD1_k127_226215_9 Ammonium Transporter K03320 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 595.0
LYD1_k127_226215_90 Domain of unknown function (DUF4332) - - - 0.0004576 51.0
LYD1_k127_2283159_0 belongs to the aldehyde dehydrogenase family - - - 2.719e-199 635.0
LYD1_k127_2283159_1 choline dehydrogenase activity K03333 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0009405,GO:0016491,GO:0016614,GO:0016899,GO:0016995,GO:0044419,GO:0051704,GO:0055114 1.1.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009022 589.0
LYD1_k127_2332944_0 AcrB/AcrD/AcrF family - - - 0.0 1177.0
LYD1_k127_2332944_1 PFAM fumarate reductase succinate dehydrogenase flavoprotein domain protein K00239 - 1.3.5.1,1.3.5.4 4.948e-310 957.0
LYD1_k127_2332944_10 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001664 289.0
LYD1_k127_2332944_11 Cytochrome b/b6/petB K00412,K03888 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002359 250.0
LYD1_k127_2332944_12 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000002021 246.0
LYD1_k127_2332944_13 phosphorelay signal transduction system K07667 - - 0.000000000000000000000000000000000000000000000000000000003439 206.0
LYD1_k127_2332944_14 cellulose binding - - - 0.000000000000000000000000000000000000000000000000000002811 217.0
LYD1_k127_2332944_15 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000004315 171.0
LYD1_k127_2332944_16 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000001198 135.0
LYD1_k127_2332944_17 - K01992,K19341 - - 0.0000000000000000000000000000000001234 150.0
LYD1_k127_2332944_18 Rieske [2Fe-2S] domain K02636,K03886 - 1.10.9.1 0.000000000000000000000000000001396 126.0
LYD1_k127_2332944_19 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000009792 123.0
LYD1_k127_2332944_2 Fibronectin type III-like domain - - - 3.568e-306 954.0
LYD1_k127_2332944_20 Uroporphyrinogen decarboxylase (URO-D) - - - 0.000000000000000000000000000122 128.0
LYD1_k127_2332944_21 Cytochrome b(C-terminal)/b6/petD K00412 - - 0.000000000000000000000000004158 124.0
LYD1_k127_2332944_22 exo-alpha-(2->6)-sialidase activity K01186 GO:0001573,GO:0003674,GO:0003824,GO:0004308,GO:0004553,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006629,GO:0006643,GO:0006664,GO:0006665,GO:0006672,GO:0006687,GO:0006689,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009311,GO:0009313,GO:0009987,GO:0016020,GO:0016042,GO:0016052,GO:0016787,GO:0016798,GO:0016997,GO:0019377,GO:0030149,GO:0034641,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043603,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044424,GO:0044464,GO:0046466,GO:0046479,GO:0046514,GO:0071704,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575,GO:1903509 3.2.1.18 0.0000000000000000000000008182 122.0
LYD1_k127_2332944_24 bacterial-type flagellum-dependent cell motility - - - 0.0000000000000001587 93.0
LYD1_k127_2332944_25 Ami_2 - - - 0.0000000000000008659 92.0
LYD1_k127_2332944_26 succinate dehydrogenase K00241,K00247 - - 0.000000000003756 71.0
LYD1_k127_2332944_27 Cytochrome c - - - 0.000001378 60.0
LYD1_k127_2332944_28 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00242 - - 0.00002534 52.0
LYD1_k127_2332944_3 cation efflux system protein (Heavy metal efflux pump) - - - 1.878e-293 933.0
LYD1_k127_2332944_4 TIGRFAM cysteine desulfurase family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002389 548.0
LYD1_k127_2332944_5 stress-induced mitochondrial fusion - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006353 521.0
LYD1_k127_2332944_6 carbohydrate transport K02027 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002915 442.0
LYD1_k127_2332944_7 glycerophosphodiester transmembrane transport K02026 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003096 380.0
LYD1_k127_2332944_8 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001734 358.0
LYD1_k127_2332944_9 transmembrane transport K02025,K05814,K10118,K10237,K10241,K15771,K17235,K17242,K17316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 334.0
LYD1_k127_2351741_0 PFAM carboxyl transferase K01966 - 2.1.3.15,6.4.1.3 6.985e-209 660.0
LYD1_k127_2351741_1 PFAM 2-nitropropane dioxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000001241 229.0
LYD1_k127_2351741_2 Biotin carboxylase K01961,K01965 - 6.3.4.14,6.4.1.2,6.4.1.3 0.0000000000000000000000000000000000000000000000004817 180.0
LYD1_k127_2351741_3 Belongs to the P-Pant transferase superfamily K06133 - - 0.000000000000000000000000000002 130.0
LYD1_k127_2351741_4 TIGRFAM PfaD family protein - - - 0.00000000000001225 81.0
LYD1_k127_2367492_0 transposase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007181 500.0
LYD1_k127_2367492_1 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001908 398.0
LYD1_k127_2367492_2 chlorophyll binding K01186,K02487,K12543 - 3.2.1.18 0.000000000004374 66.0
LYD1_k127_2367492_3 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.0003582 51.0
LYD1_k127_2433143_0 SPTR Q471D1 TPR repeat Bacterial transcriptional activator domain Tetratricopeptide TPR_4 - - - 4.347e-196 649.0
LYD1_k127_2433143_1 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004176 509.0
LYD1_k127_2433143_10 - - - - 0.00000000000000003423 85.0
LYD1_k127_2433143_11 ADP binding - - - 0.000000003988 61.0
LYD1_k127_2433143_2 Glycosyl hydrolase family 30 TIM-barrel domain K01201 - 3.2.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003715 508.0
LYD1_k127_2433143_3 aldo keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001727 494.0
LYD1_k127_2433143_4 PFAM Alpha beta hydrolase fold-3 domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 359.0
LYD1_k127_2433143_5 NmrA-like family K19267 - 1.6.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002637 326.0
LYD1_k127_2433143_6 AraC-type transcriptional regulator N-terminus - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007279 312.0
LYD1_k127_2433143_7 Bacterial pre-peptidase C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000005783 250.0
LYD1_k127_2433143_8 COGs COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase) - - - 0.0000000000000000000000000000000000000000000000000000000000007873 216.0
LYD1_k127_2433143_9 COGs COG1670 Acetyltransferase including N-acetylase of ribosomal protein - - - 0.000000000000000000000000000000000000000001003 162.0
LYD1_k127_2434430_0 Alpha amylase, catalytic domain - - - 0.0 1334.0
LYD1_k127_2434430_1 Belongs to the GPI family K01810,K13810 - 2.2.1.2,5.3.1.9 0.0 1062.0
LYD1_k127_2434430_10 PFAM phosphoesterase, RecJ domain protein K07462 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 610.0
LYD1_k127_2434430_11 Alpha-L-fucosidase K01206 - 3.2.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001547 584.0
LYD1_k127_2434430_12 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain K04940 - 1.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001359 580.0
LYD1_k127_2434430_13 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823 - 2.6.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 580.0
LYD1_k127_2434430_14 PFAM Transketolase central region K00162,K11381,K21417 - 1.2.4.1,1.2.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004673 571.0
LYD1_k127_2434430_15 COGs COG0318 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005012 546.0
LYD1_k127_2434430_16 Required for morphogenesis under gluconeogenic growth conditions - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 535.0
LYD1_k127_2434430_17 Belongs to the glycosyl hydrolase 57 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000613 528.0
LYD1_k127_2434430_18 PFAM glycoside hydrolase, family 77 K00705 - 2.4.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 523.0
LYD1_k127_2434430_19 Serine threonine protein kinase K08884 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006789 483.0
LYD1_k127_2434430_2 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.0 1007.0
LYD1_k127_2434430_20 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005023 471.0
LYD1_k127_2434430_21 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000638 468.0
LYD1_k127_2434430_22 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009784 448.0
LYD1_k127_2434430_23 TIGRFAM Glyceraldehyde-3-phosphate dehydrogenase, type I K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002567 430.0
LYD1_k127_2434430_24 CpXC protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007515 423.0
LYD1_k127_2434430_25 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 415.0
LYD1_k127_2434430_26 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004012 417.0
LYD1_k127_2434430_27 NADH ubiquinone oxidoreductase, 20 Kd subunit K14128 - 1.8.98.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 387.0
LYD1_k127_2434430_28 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001524 373.0
LYD1_k127_2434430_29 sulfurtransferase K01011 - 2.8.1.1,2.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000488 365.0
LYD1_k127_2434430_3 cobalamin binding - - - 8.514e-274 850.0
LYD1_k127_2434430_30 ABC-type multidrug transport system, ATPase component K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003815 358.0
LYD1_k127_2434430_31 Glycosyl transferase, family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 352.0
LYD1_k127_2434430_32 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008066 352.0
LYD1_k127_2434430_33 PFAM ROK family protein K00845 - 2.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000863 344.0
LYD1_k127_2434430_34 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009015 326.0
LYD1_k127_2434430_35 TIGRFAM CRISPR-associated protein, Csm1 family K07016 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005577 342.0
LYD1_k127_2434430_36 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K00627 - 2.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 326.0
LYD1_k127_2434430_37 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 317.0
LYD1_k127_2434430_38 transcription factor binding K11527 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003346 319.0
LYD1_k127_2434430_39 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005307 306.0
LYD1_k127_2434430_4 Heterodisulfide reductase subunit A and related polyferredoxins K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 4.338e-249 785.0
LYD1_k127_2434430_40 glycosyl transferase group 1 K08256 - 2.4.1.345 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007409 298.0
LYD1_k127_2434430_41 Binding-protein-dependent transport system inner membrane component K02018 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003757 278.0
LYD1_k127_2434430_42 Heterodisulfide reductase, subunit B K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004213 278.0
LYD1_k127_2434430_43 CRISPR-associated endoribonuclease Cas6 K19091 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003337 274.0
LYD1_k127_2434430_44 histone H2A K63-linked ubiquitination - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002875 259.0
LYD1_k127_2434430_45 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001395 255.0
LYD1_k127_2434430_46 TIGRFAM CRISPR-associated RAMP protein, Csm3 family K09002 - - 0.00000000000000000000000000000000000000000000000000000000000000000003346 243.0
LYD1_k127_2434430_47 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000006438 235.0
LYD1_k127_2434430_48 CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette K15342 - - 0.000000000000000000000000000000000000000000000000000000000000002851 229.0
LYD1_k127_2434430_49 Bacterial extracellular solute-binding protein K02020 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0008150,GO:0030288,GO:0030313,GO:0030973,GO:0031975,GO:0040007,GO:0042597,GO:0043167,GO:0043168,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044403,GO:0044419,GO:0044464,GO:0051704 - 0.00000000000000000000000000000000000000000000000000000000000002386 226.0
LYD1_k127_2434430_5 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 3.252e-241 775.0
LYD1_k127_2434430_50 PFAM Glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.00000000000000000000000000000000000000000000000000000000003417 215.0
LYD1_k127_2434430_51 Ribose/Galactose Isomerase K01808 - 5.3.1.6 0.0000000000000000000000000000000000000000000000000000000004308 205.0
LYD1_k127_2434430_52 - - - - 0.000000000000000000000000000000000000000000000000000005314 199.0
LYD1_k127_2434430_53 PFAM methyl-viologen-reducing hydrogenase delta subunit K14127 - 1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000003951 192.0
LYD1_k127_2434430_54 RNA-directed DNA polymerase K00986 - 2.7.7.49 0.00000000000000000000000000000000000000000000000001091 191.0
LYD1_k127_2434430_56 Putative membrane peptidase family (DUF2324) - - - 0.0000000000000000000000000000000000000000000000005087 186.0
LYD1_k127_2434430_57 ABC-2 family transporter protein - - - 0.00000000000000000000000000000000000000000000004426 179.0
LYD1_k127_2434430_58 PFAM glycoside hydrolase, family 77 K00705 - 2.4.1.25 0.0000000000000000000000000000000000000000000001224 171.0
LYD1_k127_2434430_59 TIGRFAM CRISPR-associated RAMP protein, Csm4 family K19139 - - 0.0000000000000000000000000000000000000000000001261 181.0
LYD1_k127_2434430_6 PFAM nickel-dependent hydrogenase, large subunit K14126 - 1.8.98.5 1.846e-224 706.0
LYD1_k127_2434430_60 Cytidylyltransferase-like - - - 0.00000000000000000000000000000000000000001188 163.0
LYD1_k127_2434430_61 - - - - 0.0000000000000000000000000000000000000001149 156.0
LYD1_k127_2434430_62 acyl-phosphate glycerol-3-phosphate acyltransferase activity K08591 - 2.3.1.15 0.0000000000000000000000000000000000000005845 156.0
LYD1_k127_2434430_63 PFAM low molecular weight phosphotyrosine protein phosphatase K01104 - 3.1.3.48 0.000000000000000000000000000000000000008018 150.0
LYD1_k127_2434430_64 RAMP superfamily K19140 - - 0.000000000000000000000000000000000001187 157.0
LYD1_k127_2434430_65 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000002508 144.0
LYD1_k127_2434430_66 Coenzyme A transferase K01040 - 2.8.3.12 0.00000000000000000000000000002019 128.0
LYD1_k127_2434430_67 Glyoxalase-like domain K06996 - - 0.00000000000000000000000000005056 121.0
LYD1_k127_2434430_68 spore germination K03605 - - 0.00000000000000000000000001038 115.0
LYD1_k127_2434430_69 PFAM glycoside hydrolase family 29 (alpha-L-fucosidase) K01206 - 3.2.1.51 0.0000000000000000000000000845 106.0
LYD1_k127_2434430_7 SMART AAA ATPase - - - 2.013e-217 682.0
LYD1_k127_2434430_70 Belongs to the UPF0102 family K07460 - - 0.00000000000000000000002799 104.0
LYD1_k127_2434430_71 proteolysis K21140 - 3.13.1.6 0.00000000000000000000009084 108.0
LYD1_k127_2434430_73 CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette K09951 - - 0.0000000000000000002608 91.0
LYD1_k127_2434430_74 CRISPR-associated protein - - - 0.00000000000000002132 91.0
LYD1_k127_2434430_75 Csm2 Type III-A K19138 - - 0.0000000000002421 76.0
LYD1_k127_2434430_76 Cyclic nucleotide-monophosphate binding domain - - - 0.00000001373 58.0
LYD1_k127_2434430_77 TIGRFAM phosphate binding protein K02040 - - 0.0000007096 59.0
LYD1_k127_2434430_78 Sigma-70, region 4 K03088 - - 0.00007451 54.0
LYD1_k127_2434430_79 Tetratricopeptide TPR_2 repeat protein - - - 0.0002863 55.0
LYD1_k127_2434430_8 His Kinase A (phosphoacceptor) domain - - - 8.3e-216 680.0
LYD1_k127_2434430_9 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 1.568e-194 612.0
LYD1_k127_2435361_0 PFAM ABC transporter related K02056 - 3.6.3.17 1.549e-247 772.0
LYD1_k127_2435361_1 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 1.56e-236 744.0
LYD1_k127_2435361_10 Belongs to the ABC transporter superfamily K02031 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000415 516.0
LYD1_k127_2435361_11 Belongs to the ABC transporter superfamily K02032,K10823 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000709 501.0
LYD1_k127_2435361_12 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003191 503.0
LYD1_k127_2435361_13 PFAM extracellular solute-binding protein, family 5 K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009164 505.0
LYD1_k127_2435361_14 Binding-protein-dependent transport system inner membrane component K02034,K15582 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006548 486.0
LYD1_k127_2435361_15 Oligopeptide/dipeptide transporter, C-terminal region K10823 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 468.0
LYD1_k127_2435361_17 Bacterial extracellular solute-binding proteins, family 5 Middle K15580 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005275 471.0
LYD1_k127_2435361_18 Belongs to the ABC transporter superfamily K02031 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 455.0
LYD1_k127_2435361_19 nitrogen compound transport K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003899 457.0
LYD1_k127_2435361_2 Transcriptional activator domain - - - 1.04e-230 752.0
LYD1_k127_2435361_20 Belongs to the ABC transporter superfamily K02031,K15583 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005784 437.0
LYD1_k127_2435361_21 LysM domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 432.0
LYD1_k127_2435361_22 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 430.0
LYD1_k127_2435361_23 PFAM basic membrane lipoprotein K07335 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006565 421.0
LYD1_k127_2435361_24 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 414.0
LYD1_k127_2435361_25 HD domain K07814 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009853 413.0
LYD1_k127_2435361_26 N-terminal TM domain of oligopeptide transport permease C K15582 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005027 338.0
LYD1_k127_2435361_27 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000053 336.0
LYD1_k127_2435361_28 PFAM binding-protein-dependent transport systems inner membrane component K15581 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002409 334.0
LYD1_k127_2435361_29 FGGY family of carbohydrate kinases, N-terminal domain K00854 - 2.7.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002702 336.0
LYD1_k127_2435361_3 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 1.862e-229 739.0
LYD1_k127_2435361_30 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 315.0
LYD1_k127_2435361_31 histone H2A K63-linked ubiquitination - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003523 324.0
LYD1_k127_2435361_33 SMART protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003056 299.0
LYD1_k127_2435361_34 CBS domain containing protein K03699 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002083 293.0
LYD1_k127_2435361_35 Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis K03816 - 2.4.2.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005378 279.0
LYD1_k127_2435361_36 inositol 2-dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007175 285.0
LYD1_k127_2435361_37 Domain of unknown function (DUF389) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000008163 257.0
LYD1_k127_2435361_38 PFAM Maf family protein K06287 - - 0.000000000000000000000000000000000000000000000000000000000000000000001475 242.0
LYD1_k127_2435361_39 - - - - 0.00000000000000000000000000000000000000000000000000000000000002662 225.0
LYD1_k127_2435361_4 NTF2-like N-terminal transpeptidase domain K05515 - 3.4.16.4 2.244e-214 689.0
LYD1_k127_2435361_40 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000009219 211.0
LYD1_k127_2435361_41 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.000000000000000000000000000000000000000000000000000002918 201.0
LYD1_k127_2435361_42 Haloacid dehalogenase domain protein hydrolase - - - 0.0000000000000000000000000000000000000000000000000004171 188.0
LYD1_k127_2435361_43 Family of unknown function (DUF5317) - - - 0.0000000000000000000000000000000000000217 150.0
LYD1_k127_2435361_44 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000000000008577 149.0
LYD1_k127_2435361_45 cytidine deaminase activity K01489 GO:0001882,GO:0001884,GO:0003674,GO:0003824,GO:0004126,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006216,GO:0006217,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008655,GO:0009056,GO:0009058,GO:0009116,GO:0009119,GO:0009120,GO:0009164,GO:0009972,GO:0009987,GO:0015949,GO:0016787,GO:0016810,GO:0016814,GO:0018130,GO:0019239,GO:0019438,GO:0019439,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0036094,GO:0042454,GO:0042802,GO:0043094,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046087,GO:0046092,GO:0046121,GO:0046125,GO:0046127,GO:0046131,GO:0046133,GO:0046135,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0047844,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0097159,GO:0097367,GO:1901135,GO:1901136,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901657,GO:1901658 3.5.4.5 0.000000000000000000000000000000000008553 141.0
LYD1_k127_2435361_46 phosphorelay signal transduction system - - - 0.00000000000000000000000000006396 129.0
LYD1_k127_2435361_47 PD-(D/E)XK nuclease superfamily - - - 0.0000000000000000000000000005258 118.0
LYD1_k127_2435361_48 Streptomycin adenylyltransferase K05593 - - 0.000000000008008 68.0
LYD1_k127_2435361_5 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009918 567.0
LYD1_k127_2435361_50 PFAM basic membrane lipoprotein K07335 - - 0.0000002214 63.0
LYD1_k127_2435361_6 Subtilase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005676 565.0
LYD1_k127_2435361_7 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 542.0
LYD1_k127_2435361_8 PFAM Radical SAM domain protein K04069 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004151 535.0
LYD1_k127_2435361_9 Belongs to the ABC transporter superfamily K02032,K10823 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002692 526.0
LYD1_k127_2436529_0 PFAM magnesium chelatase ChlI subunit K07391 - - 1.499e-248 775.0
LYD1_k127_2436529_1 cell wall glycoprotein biosynthetic process - - - 1.086e-208 655.0
LYD1_k127_2436529_10 inositol 2-dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002952 405.0
LYD1_k127_2436529_11 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003793 382.0
LYD1_k127_2436529_12 Bacterial transcriptional activator domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003975 404.0
LYD1_k127_2436529_13 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002987 372.0
LYD1_k127_2436529_14 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008332 373.0
LYD1_k127_2436529_15 PFAM ABC transporter related K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004451 368.0
LYD1_k127_2436529_16 ATPases associated with a variety of cellular activities K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 366.0
LYD1_k127_2436529_17 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007282 347.0
LYD1_k127_2436529_18 PFAM 6-O-methylguanine DNA methyltransferase, DNA binding domain K10778 - 2.1.1.63 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006878 315.0
LYD1_k127_2436529_19 PFAM DegV family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002116 288.0
LYD1_k127_2436529_2 PFAM Nickel-dependent hydrogenase, large subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006095 592.0
LYD1_k127_2436529_21 Psort location Cytoplasmic, score 8.87 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005222 280.0
LYD1_k127_2436529_22 PFAM glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002302 279.0
LYD1_k127_2436529_23 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004962 269.0
LYD1_k127_2436529_24 PFAM Helix-turn-helix, type 11 domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005113 263.0
LYD1_k127_2436529_25 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007102 260.0
LYD1_k127_2436529_26 Sigma factor PP2C-like phosphatases K01768,K07315 - 3.1.3.3,4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000001639 251.0
LYD1_k127_2436529_27 Serine threonine protein kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000007195 252.0
LYD1_k127_2436529_28 Fatty acid desaturase - - - 0.000000000000000000000000000000000000000000000000000000000000000001816 239.0
LYD1_k127_2436529_29 Serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000008223 237.0
LYD1_k127_2436529_3 COGs COG1132 ABC-type multidrug transport system ATPase and permease components K06147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009054 599.0
LYD1_k127_2436529_30 PFAM secretion protein HlyD family protein K01993 - - 0.000000000000000000000000000000000000000000000000000000182 213.0
LYD1_k127_2436529_31 N-Acetylmuramoyl-L-alanine amidase K01447,K03806,K11066 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000003158 204.0
LYD1_k127_2436529_32 Part of the MsrPQ system that repairs oxidized cell envelope proteins containing methionine sulfoxide residues (Met- O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated cell envelope proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain K17247 - - 0.0000000000000000000000000000000000000000000000000000003899 201.0
LYD1_k127_2436529_33 deaminated base DNA N-glycosylase activity K10800 - - 0.00000000000000000000000000000000000000000000000000006592 194.0
LYD1_k127_2436529_35 SMART protein phosphatase 2C domain protein K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000001085 201.0
LYD1_k127_2436529_36 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000002317 187.0
LYD1_k127_2436529_37 peptidoglycan turnover - - - 0.000000000000000000000000000000000000000000000004956 181.0
LYD1_k127_2436529_38 heme binding K03791,K08642,K21472 - - 0.00000000000000000000000000000000000000000000001592 183.0
LYD1_k127_2436529_39 PFAM DegV family protein - - - 0.0000000000000000000000000000000000000000000000254 181.0
LYD1_k127_2436529_4 ABC transporter transmembrane region K06147,K06148 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009556 591.0
LYD1_k127_2436529_40 - - - - 0.00000000000000000000000000000000000000000000003727 175.0
LYD1_k127_2436529_41 transcriptional regulator - - - 0.0000000000000000000000000000000000000000001959 166.0
LYD1_k127_2436529_42 MFS/sugar transport protein K03292 - - 0.00000000000000000000000000000000000005808 158.0
LYD1_k127_2436529_43 GrpB protein - - - 0.0000000000000000000000000000000000001311 151.0
LYD1_k127_2436529_44 PhoQ Sensor K07636 - 2.7.13.3 0.0000000000000000000000000000000000002032 161.0
LYD1_k127_2436529_45 - - - - 0.000000000000000000000000000000000000343 156.0
LYD1_k127_2436529_46 PFAM Formylglycine-generating sulfatase enzyme K12132 - 2.7.11.1 0.000000000000000000000000000000000009927 156.0
LYD1_k127_2436529_47 Protein of unknown function (DUF2089) - - - 0.00000000000000000000000000000000002447 139.0
LYD1_k127_2436529_48 PFAM helix-turn-helix- domain containing protein, AraC type K13653 - - 0.000000000000000000000000000000004129 135.0
LYD1_k127_2436529_49 epimerase - - - 0.00000000000000000000000000000003991 137.0
LYD1_k127_2436529_5 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003079 493.0
LYD1_k127_2436529_50 - - - - 0.00000000000000000000000000000005561 127.0
LYD1_k127_2436529_51 phosphorelay signal transduction system - - - 0.000000000000000000000000000002722 124.0
LYD1_k127_2436529_52 Acyl-transferase - - - 0.000000000000000000000000000002928 133.0
LYD1_k127_2436529_53 3'-5' exonuclease K03684 - 3.1.13.5 0.0000000000000000000000000001367 118.0
LYD1_k127_2436529_54 - - - - 0.0000000000000000000000000005756 117.0
LYD1_k127_2436529_55 RNA-binding - - - 0.00000000000000000000005058 102.0
LYD1_k127_2436529_57 Oxidoreductase molybdopterin binding - - - 0.000000000000000000003671 104.0
LYD1_k127_2436529_58 creatininase K01470 - 3.5.2.10 0.00000000000000000005805 100.0
LYD1_k127_2436529_59 PFAM peptidase M52 hydrogen uptake protein K03605 - - 0.000000000000000002267 91.0
LYD1_k127_2436529_6 Part of the MsrPQ system that repairs oxidized cell envelope proteins containing methionine sulfoxide residues (Met- O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated cell envelope proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002367 460.0
LYD1_k127_2436529_60 - - - - 0.000000000000000005593 88.0
LYD1_k127_2436529_61 - - - - 0.0000000000000001471 81.0
LYD1_k127_2436529_62 methyltransferase - - - 0.0000000000000001473 85.0
LYD1_k127_2436529_63 Putative adhesin - - - 0.0000000000000004673 89.0
LYD1_k127_2436529_65 PFAM Transcription factor CarD K07736 - - 0.00000000000001544 79.0
LYD1_k127_2436529_66 peptidoglycan turnover - - - 0.00000000002138 69.0
LYD1_k127_2436529_67 PFAM Isoprenylcysteine carboxyl methyltransferase - - - 0.0000000002994 67.0
LYD1_k127_2436529_68 Ergosterol biosynthesis ERG4/ERG24 family - - - 0.0000000004971 62.0
LYD1_k127_2436529_69 - - - - 0.000000001231 69.0
LYD1_k127_2436529_7 peptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001435 472.0
LYD1_k127_2436529_70 FecR protein - - - 0.000000002113 70.0
LYD1_k127_2436529_75 Protein of unknown function (DUF1232) - - - 0.00001727 54.0
LYD1_k127_2436529_76 ATP GTP-binding site motif A (P-loop) G-protein coupled receptors signature K06921 - - 0.0004179 53.0
LYD1_k127_2436529_8 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003604 430.0
LYD1_k127_2436529_9 PFAM sugar isomerase (SIS) K00820 - 2.6.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008854 419.0
LYD1_k127_2454727_0 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 GO:0003674,GO:0003824,GO:0005575,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008808,GO:0009058,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0019637,GO:0030572,GO:0032048,GO:0032049,GO:0032502,GO:0043934,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0045017,GO:0046471,GO:0046474,GO:0046486,GO:0071704,GO:0090407,GO:1901576 - 0.0000000000000000000000000000000003684 146.0
LYD1_k127_2454727_1 SNARE associated Golgi protein - - - 0.00000000000001057 80.0
LYD1_k127_2454727_2 N-terminal 7TM region of histidine kinase - - - 0.000000006136 69.0
LYD1_k127_2466044_0 Phosphoglucomutase/phosphomannomutase, C-terminal domain K01835 GO:0000271,GO:0003674,GO:0003824,GO:0004614,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0005996,GO:0006006,GO:0006012,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016052,GO:0016853,GO:0016866,GO:0016868,GO:0019318,GO:0019320,GO:0019388,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0055114,GO:0071704,GO:1901575,GO:1901576 5.4.2.2 1.566e-271 843.0
LYD1_k127_2466044_1 denitrification pathway - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002671 580.0
LYD1_k127_2466044_10 amine dehydrogenase activity - - - 0.00001893 50.0
LYD1_k127_2466044_2 MATE efflux family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001606 399.0
LYD1_k127_2466044_3 N-4 methylation of cytosine K00590 - 2.1.1.113 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005435 337.0
LYD1_k127_2466044_4 PFAM regulatory protein LuxR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 314.0
LYD1_k127_2466044_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003653 287.0
LYD1_k127_2466044_6 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001936 223.0
LYD1_k127_2466044_7 cheY-homologous receiver domain K11443 - - 0.0000000000000000000000000000000000000005346 152.0
LYD1_k127_2466044_9 PhoQ Sensor - - - 0.00000000000000987 85.0
LYD1_k127_2626842_0 Polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000033 392.0
LYD1_k127_2626842_1 SNF2 family N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005409 370.0
LYD1_k127_2626842_10 Trimethylamine methyltransferase (MTTB) K14083 - 2.1.1.250 0.0000000000000000000000000000000000000005545 161.0
LYD1_k127_2626842_11 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000006009 140.0
LYD1_k127_2626842_12 Polysaccharide deacetylase - - - 0.0000000000000000000000000000004399 138.0
LYD1_k127_2626842_13 TIGRFAM methyltransferase FkbM family - - - 0.00000000000000000000000003541 119.0
LYD1_k127_2626842_14 ATP-binding protein, IstB SW ISTB_ECOLI (P15026) (265 aa) fasta scores E() 0, 47.4 id in 249 aa. Also almost identical to Yersinia pestis and Escherichia coli - - - 0.00000000000000000000000003923 121.0
LYD1_k127_2626842_15 StbA protein K18640 - - 0.000000001532 69.0
LYD1_k127_2626842_16 Methyltransferase - - - 0.000000003707 69.0
LYD1_k127_2626842_2 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001666 314.0
LYD1_k127_2626842_3 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004869 304.0
LYD1_k127_2626842_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002372 293.0
LYD1_k127_2626842_5 Glycosyltransferase like family K07011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007438 276.0
LYD1_k127_2626842_6 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001488 271.0
LYD1_k127_2626842_7 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000001246 206.0
LYD1_k127_2626842_8 PFAM Glycosyl transferase family 2 K07011,K11936 - - 0.000000000000000000000000000000000000000000000000000001756 206.0
LYD1_k127_2626842_9 Polynucleotide kinase 3 phosphatase K03273 - 3.1.3.82,3.1.3.83 0.00000000000000000000000000000000000000000000003555 176.0
LYD1_k127_2639154_0 Formate/nitrite transporter K06212 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005012 380.0
LYD1_k127_2639154_2 NmrA-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000008986 225.0
LYD1_k127_2639154_3 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000003743 79.0
LYD1_k127_2722192_0 Glycosyl hydrolase 36 superfamily, catalytic domain K13688 - - 0.0 1532.0
LYD1_k127_2722192_1 Carbohydrate phosphorylase - - - 0.0 1240.0
LYD1_k127_2722192_10 xanthine dehydrogenase activity K11178 - 1.17.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003011 331.0
LYD1_k127_2722192_11 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001667 323.0
LYD1_k127_2722192_12 PFAM GTP cyclohydrolase I K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007311 297.0
LYD1_k127_2722192_13 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 300.0
LYD1_k127_2722192_14 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000583 259.0
LYD1_k127_2722192_15 permease - - - 0.0000000000000000000000000000000000000000000000000000000195 213.0
LYD1_k127_2722192_16 Aldehyde oxidase and xanthine dehydrogenase, a b hammerhead domain - - - 0.00000000000000000000000000000000000000000000000000000008035 199.0
LYD1_k127_2722192_17 TIGRFAM pyruvate ketoisovalerate oxidoreductase, gamma subunit K00172 - 1.2.7.1 0.00000000000000000000000000000000000000000000000000001406 199.0
LYD1_k127_2722192_18 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.000000000000000000000000000000000000000000000002333 183.0
LYD1_k127_2722192_19 - - - - 0.00000000000000000000000000000000000000001019 160.0
LYD1_k127_2722192_2 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01531 - 3.6.3.2 0.0 1056.0
LYD1_k127_2722192_20 - - - - 0.000000000000000000000000000000000000006955 152.0
LYD1_k127_2722192_21 - - - - 0.00000000000000000000000000000000002347 138.0
LYD1_k127_2722192_22 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633,K07589 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0008719,GO:0009987,GO:0016853,GO:0019752,GO:0034641,GO:0042558,GO:0043436,GO:0043603,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0071704,GO:1901360,GO:1901564 1.13.11.81,4.1.2.25,5.1.99.7,5.1.99.8 0.00000000000000000000000000000002582 129.0
LYD1_k127_2722192_23 PFAM glycosyl transferase, family 35 K00688 - 2.4.1.1 0.0000000000000000000000000000002466 125.0
LYD1_k127_2722192_24 AMP binding - - - 0.000000000000000000000000001354 124.0
LYD1_k127_2722192_25 - - - - 0.0000000000000000000000126 106.0
LYD1_k127_2722192_26 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity K00950,K13940 - 2.7.6.3,4.1.2.25 0.00000000000000000002356 98.0
LYD1_k127_2722192_27 Transglycosylase associated protein - - - 0.00000000000000000003046 94.0
LYD1_k127_2722192_28 - - - - 0.000000000000000002258 90.0
LYD1_k127_2722192_29 CsbD-like - - - 0.000000000000000003163 86.0
LYD1_k127_2722192_3 Domain of unknown function (DUF4070) - - - 3.518e-217 683.0
LYD1_k127_2722192_30 integral membrane protein - - - 0.00000000000000364 82.0
LYD1_k127_2722192_31 Belongs to the UPF0761 family K07058 - - 0.000000000000004133 86.0
LYD1_k127_2722192_33 PFAM Transglycosylase-associated protein - - - 0.00000000000002093 77.0
LYD1_k127_2722192_34 TIGRFAM pyruvate ferredoxin flavodoxin oxidoreductase, delta subunit K00171 - 1.2.7.1 0.0000000000001834 81.0
LYD1_k127_2722192_35 - - - - 0.000006884 49.0
LYD1_k127_2722192_36 - - - - 0.0001959 44.0
LYD1_k127_2722192_4 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K01147,K12573 - 3.1.13.1 5.496e-211 666.0
LYD1_k127_2722192_5 Apoptosis-inducing factor, mitochondrion-associated, C-term - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002472 503.0
LYD1_k127_2722192_6 phosphorelay signal transduction system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005255 424.0
LYD1_k127_2722192_7 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00169 - 1.2.7.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 405.0
LYD1_k127_2722192_8 Belongs to the peptidase M50B family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001787 397.0
LYD1_k127_2722192_9 thiamine pyrophosphate enzyme domain protein TPP-binding K00170 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006364 361.0
LYD1_k127_2752760_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 447.0
LYD1_k127_2752760_1 PFAM major facilitator superfamily MFS_1 K08151 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002541 431.0
LYD1_k127_2752760_2 carboxylic ester hydrolase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001184 282.0
LYD1_k127_2752760_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000009001 231.0
LYD1_k127_2820189_0 Type III restriction enzyme res subunit K01156 - 3.1.21.5 1.173e-227 715.0
LYD1_k127_2820189_1 PFAM binding-protein-dependent transport systems inner membrane component K02025 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008173 326.0
LYD1_k127_2820189_2 COGs COG0395 ABC-type sugar transport system permease component K02026 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002453 315.0
LYD1_k127_2820189_3 COG1233 Phytoene dehydrogenase and related proteins K09835 - 5.2.1.13 0.00000000000000000000000000000000001082 154.0
LYD1_k127_2846904_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 6.939e-277 860.0
LYD1_k127_2846904_1 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 8.416e-224 705.0
LYD1_k127_2846904_10 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007029 441.0
LYD1_k127_2846904_11 PFAM adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002411 376.0
LYD1_k127_2846904_12 ROK family K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007119 353.0
LYD1_k127_2846904_13 Fumarase C-terminus K01676,K01678 - 4.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002543 330.0
LYD1_k127_2846904_14 PFAM Major Facilitator Superfamily K08223 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009998 301.0
LYD1_k127_2846904_15 Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine K05359 GO:0003674,GO:0003824,GO:0004664,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006558,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009094,GO:0009095,GO:0009507,GO:0009536,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0019438,GO:0019752,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0047769,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902221,GO:1902223 4.2.1.51,4.2.1.91 0.000000000000000000000000000000000000000000000000000000000000000000000000000004102 269.0
LYD1_k127_2846904_16 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000036 256.0
LYD1_k127_2846904_17 Transmembrane exosortase (Exosortase_EpsH) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008693 274.0
LYD1_k127_2846904_18 Acetolactate synthase, small subunit K01653 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000006733 196.0
LYD1_k127_2846904_19 Belongs to the thioredoxin family K03671 GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 - 0.00000000000000000000000000000000000000000000000000006815 188.0
LYD1_k127_2846904_2 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 3.89e-221 694.0
LYD1_k127_2846904_20 Purine catabolism regulatory protein-like family K09684 - - 0.0000000000000000000000000000000000000000000000000000815 206.0
LYD1_k127_2846904_21 SMART protein phosphatase 2C domain protein K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000005147 184.0
LYD1_k127_2846904_22 (Pantothenic acid kinase)) K02173 - - 0.0000000000000000000000000000000000001565 151.0
LYD1_k127_2846904_23 pyrroloquinoline quinone binding - - - 0.00000000000000000000000000000002637 132.0
LYD1_k127_2846904_24 PFAM Endonuclease exonuclease phosphatase K07004 - - 0.00000000000000000000000000003406 138.0
LYD1_k127_2846904_25 cell adhesion involved in biofilm formation - - - 0.00000000000000000000000001339 124.0
LYD1_k127_2846904_26 - - - - 0.00000000000000000000000936 111.0
LYD1_k127_2846904_27 exo-alpha-(2->6)-sialidase activity - - - 0.00000000000000000001033 106.0
LYD1_k127_2846904_28 Transcriptional regulator PadR-like family - - - 0.00000000000000000009652 93.0
LYD1_k127_2846904_29 Domain of unknown function (DUF5109) - - - 0.000000000001205 79.0
LYD1_k127_2846904_3 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 2.174e-210 665.0
LYD1_k127_2846904_30 Acetyltransferase (GNAT) domain - - - 0.0000003269 53.0
LYD1_k127_2846904_31 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000004677 63.0
LYD1_k127_2846904_32 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00001131 57.0
LYD1_k127_2846904_33 - - - - 0.0003443 44.0
LYD1_k127_2846904_34 of the major facilitator superfamily - - - 0.0004623 52.0
LYD1_k127_2846904_4 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K01652 - 2.2.1.6 2.826e-197 630.0
LYD1_k127_2846904_5 Pep-cterm family integral membrane protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002608 576.0
LYD1_k127_2846904_6 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000342 510.0
LYD1_k127_2846904_7 metallopeptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 551.0
LYD1_k127_2846904_8 Belongs to the glycosyl hydrolase 13 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 507.0
LYD1_k127_2846904_9 Fumarate hydratase (Fumerase) K01676,K01677 - 4.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 442.0
LYD1_k127_2848318_0 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007541 517.0
LYD1_k127_2848318_1 adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005295 469.0
LYD1_k127_2848318_10 - - - - 0.00000000000000000001369 95.0
LYD1_k127_2848318_11 domain, Protein - - - 0.00000000000009812 85.0
LYD1_k127_2848318_12 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916,K01950 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008795,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016874,GO:0016879,GO:0016880,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.1.5,6.3.5.1 0.000000001333 68.0
LYD1_k127_2848318_13 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.00000001203 56.0
LYD1_k127_2848318_14 transcriptional regulator - - - 0.000003845 55.0
LYD1_k127_2848318_2 Dienelactone hydrolase family K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002696 338.0
LYD1_k127_2848318_3 Mediates influx of magnesium ions K03284 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001611 282.0
LYD1_k127_2848318_4 creatininase K01470 - 3.5.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000456 248.0
LYD1_k127_2848318_5 Integral membrane protein DUF92 - - - 0.0000000000000000000000000000000000000000000000000000000000000000001024 245.0
LYD1_k127_2848318_6 PFAM YbaK prolyl-tRNA synthetase associated region - - - 0.0000000000000000000000000000000000000000000000000000003717 201.0
LYD1_k127_2848318_8 - - - - 0.00000000000000000000000000000001093 129.0
LYD1_k127_2848318_9 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000003994 125.0
LYD1_k127_2848452_0 Belongs to the amidase family K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004538 551.0
LYD1_k127_2848452_1 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007139 432.0
LYD1_k127_2848452_10 Haloacid dehalogenase-like hydrolase K07025 - - 0.0000000000000000000001982 105.0
LYD1_k127_2848452_2 Methyltransferase domain K06983 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002137 302.0
LYD1_k127_2848452_3 short-chain dehydrogenase reductase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000009967 265.0
LYD1_k127_2848452_4 PFAM GCN5-related N-acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000006393 243.0
LYD1_k127_2848452_5 acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000001821 196.0
LYD1_k127_2848452_6 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000001545 148.0
LYD1_k127_2848452_7 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000003395 151.0
LYD1_k127_2848452_8 acetyltransferase K00621 - 2.3.1.4 0.0000000000000000000000000000000000003762 152.0
LYD1_k127_2848452_9 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000002573 138.0
LYD1_k127_2929268_0 uridine kinase K00876 - 2.7.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002566 380.0
LYD1_k127_2929268_1 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007308 351.0
LYD1_k127_2929268_3 Phosphoglycerate mutase family K01834 - 5.4.2.11 0.00000000000000000000000000000000000000000000000000004523 194.0
LYD1_k127_2938751_0 lactoylglutathione lyase activity K05606 - 5.1.99.1 0.00000000000000000000000000000000000000000000003937 173.0
LYD1_k127_2938751_1 lactoylglutathione lyase activity K08234 - - 0.00000000000000000000001001 105.0
LYD1_k127_2938751_2 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000023 74.0
LYD1_k127_2959495_0 methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000001523 190.0
LYD1_k127_2959495_1 4-amino-4-deoxy-L-arabinose transferase activity K14340 - - 0.0005378 48.0
LYD1_k127_2973282_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K02484,K07642 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004628 394.0
LYD1_k127_2973282_1 Two component transcriptional regulator, winged helix family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003911 312.0
LYD1_k127_2973282_2 D-lyxose isomerase K09988 - 5.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000328 305.0
LYD1_k127_2973282_3 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003531 251.0
LYD1_k127_2973282_6 Domain of unknown function (DUF4432) - - - 0.00000000005058 66.0
LYD1_k127_3169421_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00169,K03737 - 1.2.7.1 0.0 1784.0
LYD1_k127_3169421_1 5'-nucleotidase, C-terminal domain - - - 0.0 1557.0
LYD1_k127_3169421_10 Radical_SAM C-terminal domain K07739 - 2.3.1.48 1.096e-231 728.0
LYD1_k127_3169421_100 protein conserved in bacteria - - - 0.000000000000004932 78.0
LYD1_k127_3169421_101 protein conserved in bacteria - - - 0.0000000006684 64.0
LYD1_k127_3169421_102 family 25 K01185,K07273 GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 3.2.1.17 0.00000008666 64.0
LYD1_k127_3169421_104 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.000002324 57.0
LYD1_k127_3169421_106 STAS domain K04749 - - 0.000005463 53.0
LYD1_k127_3169421_107 Glyoxalase bleomycin resistance protein dioxygenase K01759 - 4.4.1.5 0.00001268 56.0
LYD1_k127_3169421_109 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.00008191 48.0
LYD1_k127_3169421_11 Phosphoglucomutase/phosphomannomutase, C-terminal domain - - - 4.828e-230 721.0
LYD1_k127_3169421_12 GMC oxidoreductase - - - 1.194e-226 713.0
LYD1_k127_3169421_13 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 554.0
LYD1_k127_3169421_14 inositol 2-dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002065 556.0
LYD1_k127_3169421_15 Dynamin family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002834 552.0
LYD1_k127_3169421_16 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009176 511.0
LYD1_k127_3169421_17 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009932 503.0
LYD1_k127_3169421_18 Belongs to the peptidase S8 family K13275 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001907 461.0
LYD1_k127_3169421_19 helicase superfamily c-terminal domain K11927 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004424 453.0
LYD1_k127_3169421_2 Anticodon-binding domain of tRNA K01870 - 6.1.1.5 0.0 1222.0
LYD1_k127_3169421_20 MFS_1 like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008382 455.0
LYD1_k127_3169421_21 Methyltransferase type 11 K07755 - 2.1.1.137 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008583 454.0
LYD1_k127_3169421_22 oxidoreductase activity K02012,K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006801 454.0
LYD1_k127_3169421_23 Catalyzes the conversion of dihydroorotate to orotate K00226 - 1.3.98.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008845 441.0
LYD1_k127_3169421_24 Carbohydrate kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 449.0
LYD1_k127_3169421_25 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007439 432.0
LYD1_k127_3169421_26 PFAM aminotransferase class V K04127 - 5.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001353 416.0
LYD1_k127_3169421_27 dioxygenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002813 392.0
LYD1_k127_3169421_28 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002623 396.0
LYD1_k127_3169421_29 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 385.0
LYD1_k127_3169421_3 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1003.0
LYD1_k127_3169421_30 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001583 379.0
LYD1_k127_3169421_31 Glycosyl transferase family 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004926 377.0
LYD1_k127_3169421_32 Stage II sporulation K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009263 366.0
LYD1_k127_3169421_33 beta-galactosidase activity K01195 - 3.2.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001339 374.0
LYD1_k127_3169421_34 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002604 351.0
LYD1_k127_3169421_35 Stage II sporulation K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 362.0
LYD1_k127_3169421_36 Bacterial extracellular solute-binding proteins, family 5 Middle K15580 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007445 367.0
LYD1_k127_3169421_37 ROK family K00886 - 2.7.1.63 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 325.0
LYD1_k127_3169421_38 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007065 325.0
LYD1_k127_3169421_39 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002502 305.0
LYD1_k127_3169421_4 Alpha mannosidase, middle domain K01191 - 3.2.1.24 5e-324 1010.0
LYD1_k127_3169421_40 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000692 298.0
LYD1_k127_3169421_41 PFAM metallophosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002858 294.0
LYD1_k127_3169421_42 PFAM secretion protein HlyD family protein K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009314 298.0
LYD1_k127_3169421_43 Methyladenine glycosylase K01246 - 3.2.2.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004056 274.0
LYD1_k127_3169421_44 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005184 282.0
LYD1_k127_3169421_45 5'-nucleotidase K01081,K01119 - 3.1.3.5,3.1.3.6,3.1.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002129 302.0
LYD1_k127_3169421_46 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002991 271.0
LYD1_k127_3169421_47 SMART helix-turn-helix domain protein K15539 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003914 281.0
LYD1_k127_3169421_48 TIGRFAM amidase, hydantoinase carbamoylase family K06016 - 3.5.1.6,3.5.1.87 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004077 279.0
LYD1_k127_3169421_49 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007905 276.0
LYD1_k127_3169421_5 Belongs to the formate--tetrahydrofolate ligase family K00288,K01938 GO:0003674,GO:0003824,GO:0004329,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006144,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009112,GO:0009113,GO:0009256,GO:0009257,GO:0009396,GO:0009987,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0016874,GO:0016879,GO:0018130,GO:0019238,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042440,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046112,GO:0046148,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.5.1.5,3.5.4.9,6.3.4.3 6.25e-321 992.0
LYD1_k127_3169421_50 Transporter K08217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005483 276.0
LYD1_k127_3169421_51 pseudouridine synthase activity K06178,K06181,K06183 - 5.4.99.19,5.4.99.20,5.4.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000001895 283.0
LYD1_k127_3169421_52 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008465 263.0
LYD1_k127_3169421_53 signal-transduction protein containing cAMP-binding and CBS domains - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001113 272.0
LYD1_k127_3169421_54 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000117 261.0
LYD1_k127_3169421_55 Domain of unknown function (DUF4349) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005604 259.0
LYD1_k127_3169421_56 TrkA-C domain K03499 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000213 254.0
LYD1_k127_3169421_57 PFAM ABC transporter related K02013 - 3.6.3.34 0.0000000000000000000000000000000000000000000000000000000000000000000000003719 265.0
LYD1_k127_3169421_58 metalloendopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004438 271.0
LYD1_k127_3169421_59 ABC-2 family transporter protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000001405 239.0
LYD1_k127_3169421_6 Amino acid permease - GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015179,GO:0015291,GO:0015297,GO:0015318,GO:0015711,GO:0015807,GO:0015849,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098656,GO:1902475,GO:1903825,GO:1905039 - 1.315e-285 890.0
LYD1_k127_3169421_60 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 3.5.1.88 0.0000000000000000000000000000000000000000000000000000000000000002059 224.0
LYD1_k127_3169421_61 Peptidase MA superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000001986 233.0
LYD1_k127_3169421_62 PFAM Methyltransferase type 12 - - - 0.000000000000000000000000000000000000000000000000000000000000684 214.0
LYD1_k127_3169421_63 TrkA-N domain K03499,K10716 - - 0.000000000000000000000000000000000000000000000000000000000001896 216.0
LYD1_k127_3169421_64 IA, variant 3 K07025 - - 0.00000000000000000000000000000000000000000000000000000000001827 216.0
LYD1_k127_3169421_65 Removes 5-oxoproline from various penultimate amino acid residues except L-proline K01304 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0019538,GO:0043170,GO:0044238,GO:0044424,GO:0044464,GO:0071704,GO:1901564 3.4.19.3 0.000000000000000000000000000000000000000000000000000000000366 217.0
LYD1_k127_3169421_66 Uncharacterized protein family UPF0029 K00560,K01271 - 2.1.1.45,3.4.13.9 0.0000000000000000000000000000000000000000000000000000000003899 213.0
LYD1_k127_3169421_67 - - - - 0.000000000000000000000000000000000000000000000000000000002556 210.0
LYD1_k127_3169421_68 PFAM glutamine amidotransferase class-I K07010 - - 0.000000000000000000000000000000000000000000000000000000005308 209.0
LYD1_k127_3169421_69 Binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000001056 201.0
LYD1_k127_3169421_7 glycoside hydrolase family 2 sugar binding - - - 1.74e-278 882.0
LYD1_k127_3169421_70 PFAM histidine triad (HIT) protein K19710 - 2.7.7.53 0.00000000000000000000000000000000000000000000000000000001576 201.0
LYD1_k127_3169421_71 Ergosterol biosynthesis ERG4/ERG24 family - - - 0.000000000000000000000000000000000000000000000000000000113 199.0
LYD1_k127_3169421_72 MOSC domain - - - 0.000000000000000000000000000000000000000000000000000004417 196.0
LYD1_k127_3169421_73 adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000004895 203.0
LYD1_k127_3169421_74 Amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000366 191.0
LYD1_k127_3169421_75 methyltransferase activity K02169 - 2.1.1.197 0.0000000000000000000000000000000000000000000000001219 186.0
LYD1_k127_3169421_76 PFAM MgtC SapB transporter K07507 - - 0.00000000000000000000000000000000000000000000000354 181.0
LYD1_k127_3169421_77 Probably functions as a manganese efflux pump - - - 0.0000000000000000000000000000000000000000000001586 173.0
LYD1_k127_3169421_78 chitin catabolic process K01218,K14645 - 3.2.1.78 0.000000000000000000000000000000000000000000001174 178.0
LYD1_k127_3169421_79 - - - - 0.000000000000000000000000000000000000000002239 171.0
LYD1_k127_3169421_8 Hypothetical glycosyl hydrolase 6 - - - 2.511e-278 872.0
LYD1_k127_3169421_80 transcription regulator containing HTH domain K18831 - - 0.000000000000000000000000000000000000000002854 158.0
LYD1_k127_3169421_81 Divergent PAP2 family K09775 - - 0.000000000000000000000000000000000000000004738 160.0
LYD1_k127_3169421_83 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system K19166 - - 0.000000000000000000000000000000000000004098 147.0
LYD1_k127_3169421_84 regulatory protein, arsR - - - 0.0000000000000000000000000000000000000178 146.0
LYD1_k127_3169421_85 NACHT domain - - - 0.000000000000000000000000000000000000793 149.0
LYD1_k127_3169421_86 PFAM Phosphoglycerate mutase K01834,K15634 - 5.4.2.11,5.4.2.12 0.000000000000000000000000000000000003863 143.0
LYD1_k127_3169421_87 PFAM Protein kinase domain - - - 0.0000000000000000000000000000000003801 145.0
LYD1_k127_3169421_88 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.0000000000000000000000000000000004033 132.0
LYD1_k127_3169421_89 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000001015 140.0
LYD1_k127_3169421_9 ABC transporter transmembrane region K06147 - - 7.45e-257 807.0
LYD1_k127_3169421_90 - - - - 0.000000000000000000000000000000001935 138.0
LYD1_k127_3169421_91 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000002165 143.0
LYD1_k127_3169421_92 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000299 124.0
LYD1_k127_3169421_93 PIN domain - - - 0.000000000000000000000000002578 115.0
LYD1_k127_3169421_94 methyltransferase - - - 0.0000000000000000000000003747 121.0
LYD1_k127_3169421_95 PFAM Sulfate transporter antisigma-factor antagonist STAS K04749,K04757 - 2.7.11.1 0.0000000000000000000001261 102.0
LYD1_k127_3169421_97 enzyme binding K00567,K07443 - 2.1.1.63 0.00000000000000000006287 94.0
LYD1_k127_3169421_98 Ribosomal protein S21 K02970 - - 0.00000000000000002522 85.0
LYD1_k127_3173884_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007317 477.0
LYD1_k127_3173884_1 Domain of unknown function (DUF4260) - - - 0.0000000000000000000000001056 109.0
LYD1_k127_3291932_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00003,K00982,K00990,K06950,K15371 GO:0000820,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006521,GO:0008150,GO:0008882,GO:0010565,GO:0016020,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0030312,GO:0031323,GO:0033238,GO:0040007,GO:0042221,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0060359,GO:0062012,GO:0065007,GO:0070566,GO:0071944,GO:0080090,GO:1901698 1.1.1.3,1.4.1.2,2.7.7.42,2.7.7.59,2.7.7.89 0.0 1271.0
LYD1_k127_3291932_1 PFAM glutamine synthetase catalytic region K01915 - 6.3.1.2 8.28e-252 783.0
LYD1_k127_3291932_10 Cobalt transport protein K16785 - - 0.0000000000000000000000000000000000000000000000000000000000000000000005376 246.0
LYD1_k127_3291932_11 Guanylyltransferase that catalyzes the activation of 2- phospho-L-lactate (LP) as (2S)-lactyl-2-diphospho-5'-guanosine (LPPG), via the condensation of LP with GTP. Is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor K14941 GO:0003674,GO:0003824,GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0043814,GO:0044237,GO:0044249,GO:0051186,GO:0051188,GO:0070568 2.7.7.68 0.0000000000000000000000000000000000003771 147.0
LYD1_k127_3291932_12 LysE type translocator - - - 0.000000000000000000000000000000000001624 146.0
LYD1_k127_3291932_13 ECF-type riboflavin transporter, S component K16924 - - 0.000000000000000000000000000000005617 140.0
LYD1_k127_3291932_14 Belongs to the glycosyl hydrolase 3 family K05349 - 3.2.1.21 0.00000000000000000000000000000009481 126.0
LYD1_k127_3291932_2 Belongs to the glycosyl hydrolase 3 family K05349 - 3.2.1.21 8.87e-222 703.0
LYD1_k127_3291932_3 PhoQ Sensor - - - 4.936e-221 709.0
LYD1_k127_3291932_4 PFAM ABC transporter related K16786,K16787 - - 1.198e-196 628.0
LYD1_k127_3291932_5 Luciferase-like monooxygenase K00320 - 1.5.98.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009607 604.0
LYD1_k127_3291932_6 metallopeptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002578 387.0
LYD1_k127_3291932_7 phosphorelay signal transduction system - GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006643 325.0
LYD1_k127_3291932_8 Putative vitamin uptake transporter K09125 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006862 271.0
LYD1_k127_3291932_9 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002063 270.0
LYD1_k127_3440361_0 PFAM glycoside hydrolase family 2 sugar binding - - - 1.446e-296 945.0
LYD1_k127_3440361_1 AAA ATPase domain - - - 4.64e-222 737.0
LYD1_k127_3440361_10 ABC-type multidrug transport system, ATPase and permease K02021,K06147,K11085,K18104 - 3.6.3.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001605 449.0
LYD1_k127_3440361_11 (ABC) transporter K06147,K11085 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001623 440.0
LYD1_k127_3440361_12 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004378 420.0
LYD1_k127_3440361_13 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003944 414.0
LYD1_k127_3440361_14 PFAM periplasmic binding protein LacI transcriptional regulator K02529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001878 407.0
LYD1_k127_3440361_15 Restriction endonuclease K07448 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005443 398.0
LYD1_k127_3440361_16 binding-protein-dependent transport systems inner membrane component K02026 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006829 387.0
LYD1_k127_3440361_17 binding-protein-dependent transport systems inner membrane component K02025,K05814,K10118,K10237,K10241,K15771,K17235,K17316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001798 376.0
LYD1_k127_3440361_18 3'-5' exonuclease K03684 - 3.1.13.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 337.0
LYD1_k127_3440361_19 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008669 293.0
LYD1_k127_3440361_2 Beta-Casp domain K07576 - - 8.327e-205 648.0
LYD1_k127_3440361_20 bacterial-type flagellum-dependent cell motility - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009292 298.0
LYD1_k127_3440361_21 bacterial-type flagellum-dependent cell motility - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004352 290.0
LYD1_k127_3440361_22 peptidoglycan turnover - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004517 257.0
LYD1_k127_3440361_23 PFAM AzlC family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000004324 233.0
LYD1_k127_3440361_24 Ferritin-like - - - 0.0000000000000000000000000000000000000000000000000000000000000001014 229.0
LYD1_k127_3440361_26 - - - - 0.0000000000000000000000000000000000000000000000000000000000001809 219.0
LYD1_k127_3440361_27 PFAM Rhomboid family K19225 - 3.4.21.105 0.00000000000000000000000000000000000000000000000000000008228 205.0
LYD1_k127_3440361_28 Acetyltransferase (GNAT) family - - - 0.000000000000000000000000000000000000000000000002062 180.0
LYD1_k127_3440361_29 FlgD Ig-like domain K21449 - - 0.000000000000000000000000000000001891 153.0
LYD1_k127_3440361_3 Glycosyl hydrolase family 20, domain 2 K12373 - 3.2.1.52 1.47e-199 634.0
LYD1_k127_3440361_30 acetyltransferase K03789 - 2.3.1.128 0.0000000000000000000000000000005374 127.0
LYD1_k127_3440361_31 lipoprotein biosynthetic process K13292 - - 0.00000000000000000000000007349 117.0
LYD1_k127_3440361_32 branched-chain amino acid - - - 0.00000000000000000000006534 106.0
LYD1_k127_3440361_33 - - - - 0.000000000000000008714 100.0
LYD1_k127_3440361_34 NfeD-like C-terminal, partner-binding K07403 - - 0.00000002362 63.0
LYD1_k127_3440361_35 - - - - 0.00003847 54.0
LYD1_k127_3440361_36 Conserved repeat domain - - - 0.00007604 58.0
LYD1_k127_3440361_4 ABC transporter transmembrane region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004791 572.0
LYD1_k127_3440361_5 ABC transporter transmembrane region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002569 541.0
LYD1_k127_3440361_6 PFAM Alpha amylase, catalytic K01182,K01187,K01226 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 3.2.1.10,3.2.1.20,3.2.1.93 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005869 531.0
LYD1_k127_3440361_7 PFAM band 7 protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006642 473.0
LYD1_k127_3440361_8 Bacterial extracellular solute-binding protein K02027 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002014 448.0
LYD1_k127_3440361_9 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007208 437.0
LYD1_k127_3463403_0 Tricorn protease homolog K08676 - - 0.0 1259.0
LYD1_k127_3463403_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 0.0 1127.0
LYD1_k127_3463403_10 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 7.336e-201 638.0
LYD1_k127_3463403_11 Major facilitator Superfamily - - - 2.753e-197 621.0
LYD1_k127_3463403_12 Bacterial protein of unknown function (DUF885) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004266 611.0
LYD1_k127_3463403_13 Protein of unknown function (DUF1116) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005648 568.0
LYD1_k127_3463403_14 acetyl-CoA carboxylase K01961 - 6.3.4.14,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005724 559.0
LYD1_k127_3463403_15 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004201 527.0
LYD1_k127_3463403_16 Alpha-L-fucosidase K01206 - 3.2.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009452 533.0
LYD1_k127_3463403_17 aminopeptidase activity K01179,K01269 - 3.2.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004009 519.0
LYD1_k127_3463403_19 Permease family K02824 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002177 480.0
LYD1_k127_3463403_2 H( )-stimulated, divalent metal cation uptake system K03322 - - 0.0 1069.0
LYD1_k127_3463403_20 PFAM alpha beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001907 469.0
LYD1_k127_3463403_21 Belongs to the thiolase family K00626,K00632 - 2.3.1.16,2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002668 452.0
LYD1_k127_3463403_22 homoserine dehydrogenase K00003 - 1.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001765 432.0
LYD1_k127_3463403_23 CoA-ligase K01902,K02381 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0009361,GO:0032991,GO:0042709,GO:0044424,GO:0044444,GO:0044464,GO:0045239,GO:1902494 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005662 437.0
LYD1_k127_3463403_24 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003977 391.0
LYD1_k127_3463403_25 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004485 394.0
LYD1_k127_3463403_26 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002108 381.0
LYD1_k127_3463403_27 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003948 361.0
LYD1_k127_3463403_28 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006425 351.0
LYD1_k127_3463403_29 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006196 336.0
LYD1_k127_3463403_3 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 1.051e-285 885.0
LYD1_k127_3463403_30 phosphatidylinositol kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002626 308.0
LYD1_k127_3463403_31 DNA alkylation repair enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002375 276.0
LYD1_k127_3463403_32 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001224 271.0
LYD1_k127_3463403_33 PFAM ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000087 266.0
LYD1_k127_3463403_34 Isochorismatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001749 259.0
LYD1_k127_3463403_35 Protein of unknown function (DUF3090) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001893 254.0
LYD1_k127_3463403_36 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004111 264.0
LYD1_k127_3463403_37 C4-dicarboxylate anaerobic carrier - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001768 252.0
LYD1_k127_3463403_38 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000414 249.0
LYD1_k127_3463403_39 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005882 246.0
LYD1_k127_3463403_4 Belongs to the glycosyl hydrolase 2 family K01190 - 3.2.1.23 3.175e-278 875.0
LYD1_k127_3463403_40 2Fe-2S -binding domain protein K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000002735 240.0
LYD1_k127_3463403_41 Tellurite resistance protein TehB - - - 0.0000000000000000000000000000000000000000000000000000000000000002065 228.0
LYD1_k127_3463403_43 Responsible for synthesis of pseudouridine from uracil K06177 - 5.4.99.28,5.4.99.29 0.00000000000000000000000000000000000000000000000000000000004129 215.0
LYD1_k127_3463403_44 nucleotidyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000001849 213.0
LYD1_k127_3463403_45 alpha-ribazole phosphatase activity K02226,K15634,K22305 - 3.1.3.3,3.1.3.73,5.4.2.12 0.00000000000000000000000000000000000000000000000000000001271 204.0
LYD1_k127_3463403_46 antiporter activity - - - 0.0000000000000000000000000000000000000000000000000003309 192.0
LYD1_k127_3463403_48 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000005104 204.0
LYD1_k127_3463403_49 CYTH domain K05873 - 4.6.1.1 0.0000000000000000000000000000000000000000000000003848 183.0
LYD1_k127_3463403_5 PFAM carboxyl transferase K01966 - 2.1.3.15,6.4.1.3 6.608e-249 777.0
LYD1_k127_3463403_50 integral membrane protein - - - 0.0000000000000000000000000000000000000000000774 165.0
LYD1_k127_3463403_51 PFAM PIN domain - - - 0.0000000000000000000000000000000000000000003121 162.0
LYD1_k127_3463403_52 abc-type fe3 -hydroxamate transport system, periplasmic component - - - 0.000000000000000000000000000000000000000001375 160.0
LYD1_k127_3463403_53 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.000000000000000000000000000000000000000001825 157.0
LYD1_k127_3463403_54 PIN domain - - - 0.0000000000000000000000000000000000000001907 154.0
LYD1_k127_3463403_55 Protein of unknown function (DUF421) - - - 0.000000000000000000000000000000000000001175 153.0
LYD1_k127_3463403_57 Adenosine/AMP deaminase K01488,K18286 - 3.5.4.4,3.5.4.40 0.0000000000000000000000000000000000004822 152.0
LYD1_k127_3463403_58 Peptidoglycan-binding LysM - - - 0.00000000000000000000000000000000001289 146.0
LYD1_k127_3463403_59 F420H(2)-dependent quinone reductase - - - 0.00000000000000000000000000000000002325 140.0
LYD1_k127_3463403_6 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 7.03e-249 775.0
LYD1_k127_3463403_60 Domain of unknown function (DUF1905) - - - 0.0000000000000000000000000000000001939 138.0
LYD1_k127_3463403_61 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000005559 133.0
LYD1_k127_3463403_62 PFAM transposase, IS4 family protein - - - 0.00000000000000000000000000000001319 141.0
LYD1_k127_3463403_63 Putative phosphatase (DUF442) - - - 0.000000000000000000000000000003831 127.0
LYD1_k127_3463403_64 methyltransferase activity - - - 0.0000000000000000000000000003745 121.0
LYD1_k127_3463403_65 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000005255 120.0
LYD1_k127_3463403_66 CoA carboxylase activity K01965,K02160 - 6.4.1.3 0.000000000000000000000000005333 116.0
LYD1_k127_3463403_68 SnoaL-like domain - - - 0.00000000000000000000000004994 111.0
LYD1_k127_3463403_69 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0000000000000000000000002052 122.0
LYD1_k127_3463403_7 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 3.484e-247 774.0
LYD1_k127_3463403_70 Glycosyltransferase like family 2 - - - 0.0000000000000000000000002756 115.0
LYD1_k127_3463403_71 PFAM CopG domain protein DNA-binding domain protein - - - 0.00000000000000000000002162 101.0
LYD1_k127_3463403_72 Histidine kinase-like ATPases - - - 0.00000000000000000000007705 113.0
LYD1_k127_3463403_74 DUF35 OB-fold domain, acyl-CoA-associated K07068,K07549 - - 0.000000000000000001584 89.0
LYD1_k127_3463403_75 NgoMIV restriction enzyme - - - 0.00000000000000004842 90.0
LYD1_k127_3463403_76 acetyltransferase - - - 0.0000000000000004603 83.0
LYD1_k127_3463403_77 hydroxymethylglutaryl-CoA reductase (NADPH) activity K00021 - 1.1.1.34 0.0000000000001341 75.0
LYD1_k127_3463403_78 - - - - 0.0000000000003162 71.0
LYD1_k127_3463403_79 Transport permease protein K01992 - - 0.00000001905 65.0
LYD1_k127_3463403_8 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 3.357e-241 757.0
LYD1_k127_3463403_80 Histidine kinase-like ATPases K07642 - 2.7.13.3 0.0000001512 64.0
LYD1_k127_3463403_81 FR47-like protein - - - 0.000001919 51.0
LYD1_k127_3463403_82 PFAM ABC-2 type transporter K01992 - - 0.000002157 60.0
LYD1_k127_3463403_84 Bacterial membrane protein, YfhO - - - 0.000005049 61.0
LYD1_k127_3463403_85 Integrase core domain - - - 0.000005069 48.0
LYD1_k127_3463403_86 Thioredoxin-like protein HCF164 - GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009507,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0009636,GO:0009987,GO:0010190,GO:0015035,GO:0015036,GO:0016020,GO:0016043,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0017004,GO:0019725,GO:0022607,GO:0031976,GO:0031977,GO:0031984,GO:0033554,GO:0034357,GO:0034599,GO:0034622,GO:0042221,GO:0042592,GO:0042651,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055035,GO:0055114,GO:0065003,GO:0065007,GO:0065008,GO:0070887,GO:0071840,GO:0097237,GO:0098754,GO:0098869,GO:1990748 - 0.000008697 50.0
LYD1_k127_3463403_9 PFAM AAA ATPase central domain protein K07478 - - 1.924e-212 671.0
LYD1_k127_3535730_0 FtsX-like permease family K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003289 524.0
LYD1_k127_3535730_1 secretion protein HlyD family - - - 0.000000000000000000000000000000000000000000000000000000000000001684 230.0
LYD1_k127_3561819_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.0 1091.0
LYD1_k127_3561819_1 Biogenesis protein K02275,K09792,K17686 - 1.9.3.1,3.6.3.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009857 367.0
LYD1_k127_3561819_2 - - - - 0.0000000000000000000000000000000000000000000000001229 185.0
LYD1_k127_3561819_3 DegV family - - - 0.0000000000000000000000000000000000000316 154.0
LYD1_k127_3561819_4 Metal-sensitive transcriptional repressor K21600 - - 0.000000000000000000000000000003459 121.0
LYD1_k127_3561819_5 YacP-like NYN domain K06962 - - 0.000000000000000003471 87.0
LYD1_k127_3561819_6 mercury ion transmembrane transporter activity K07213 - - 0.00000000000000005674 82.0
LYD1_k127_3561819_7 Heavy-metal-associated domain K01533,K17686 - 3.6.3.4,3.6.3.54 0.00000000005365 65.0
LYD1_k127_3592999_0 Creatinase/Prolidase N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002763 538.0
LYD1_k127_3592999_1 helix_turn_helix, Lux Regulon K03556 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001469 527.0
LYD1_k127_3592999_10 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000002428 203.0
LYD1_k127_3592999_11 organic phosphonate transmembrane transporter activity K02042 - - 0.0000000000000000000000000000000000000000000000000008258 205.0
LYD1_k127_3592999_12 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.00000000000000000000000000000000000000004865 166.0
LYD1_k127_3592999_13 cyclic nucleotide binding K10914,K21563 - - 0.00000000000000000000000000000000000000006388 160.0
LYD1_k127_3592999_15 N-terminal domain of toast_rack, DUF2154 - - - 0.0000000000000000000000000000000001959 142.0
LYD1_k127_3592999_16 Streptomycin adenylyltransferase K05593 - - 0.000000000000000000000000000004236 131.0
LYD1_k127_3592999_17 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K11354 - 2.7.13.3 0.00000000000000000000000000001879 129.0
LYD1_k127_3592999_18 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000000000000427 105.0
LYD1_k127_3592999_19 - - - - 0.0000000000000000003228 94.0
LYD1_k127_3592999_2 Flavin containing amine oxidoreductase K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000703 419.0
LYD1_k127_3592999_20 - - - - 0.000000000000002566 77.0
LYD1_k127_3592999_21 Protein of unknown function (DUF4242) - - - 0.00000000000001749 75.0
LYD1_k127_3592999_22 Ig-like domain from next to BRCA1 gene - - - 0.0000000000001526 85.0
LYD1_k127_3592999_23 4Fe-4S dicluster domain K00176 - 1.2.7.3 0.00000005868 58.0
LYD1_k127_3592999_24 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.00000008327 61.0
LYD1_k127_3592999_25 Cupin 2, conserved barrel domain protein - - - 0.00003261 50.0
LYD1_k127_3592999_26 Phytoene synthase K21678 - 2.5.1.103 0.00007893 54.0
LYD1_k127_3592999_3 Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system K02041 - 3.6.3.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006821 334.0
LYD1_k127_3592999_4 3-oxo-5-alpha-steroid 4-dehydrogenase K12343 - 1.3.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003617 299.0
LYD1_k127_3592999_5 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family K04088,K06897 - 2.5.1.105 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001811 295.0
LYD1_k127_3592999_6 epimerase dehydratase K00091 - 1.1.1.219 0.000000000000000000000000000000000000000000000000000000000000000000000214 251.0
LYD1_k127_3592999_7 CAAX protease self-immunity - - - 0.0000000000000000000000000000000000000000000000000000000000000006397 229.0
LYD1_k127_3592999_8 CAAX protease self-immunity - - - 0.0000000000000000000000000000000000000000000000000000000000001542 222.0
LYD1_k127_3592999_9 InterPro IPR014922 - - - 0.000000000000000000000000000000000000000000000000000001131 196.0
LYD1_k127_3604354_0 PFAM alpha-2-macroglobulin domain protein K06894 - - 0.0 1229.0
LYD1_k127_3604354_1 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01733 - 4.2.3.1 2.69e-240 754.0
LYD1_k127_3604354_10 PFAM tRNA synthetase class II (G H P and S) K01892 - 6.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 488.0
LYD1_k127_3604354_11 Bacterial pre-peptidase C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003178 507.0
LYD1_k127_3604354_12 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K00651 - 2.3.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006411 462.0
LYD1_k127_3604354_13 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002352 417.0
LYD1_k127_3604354_14 phosphorelay sensor kinase activity K07638,K07673,K21009 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 413.0
LYD1_k127_3604354_15 SMART ATP-binding region ATPase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004607 395.0
LYD1_k127_3604354_16 TIGRFAM purine nucleoside phosphorylase K03784 - 2.4.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002321 311.0
LYD1_k127_3604354_17 alanine dehydrogenase activity K00259 GO:0000286,GO:0001666,GO:0003674,GO:0003824,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006522,GO:0006524,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009078,GO:0009080,GO:0009628,GO:0009653,GO:0009987,GO:0016020,GO:0016054,GO:0016491,GO:0016638,GO:0019752,GO:0030154,GO:0030312,GO:0030435,GO:0032502,GO:0036293,GO:0043436,GO:0043934,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0048646,GO:0048856,GO:0048869,GO:0050896,GO:0055114,GO:0070482,GO:0071704,GO:0071944,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000314 315.0
LYD1_k127_3604354_18 spore germination - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002089 299.0
LYD1_k127_3604354_19 PFAM Cobyrinic acid a,c-diamide synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008039 291.0
LYD1_k127_3604354_2 histidine kinase A domain protein - - - 6.555e-240 788.0
LYD1_k127_3604354_20 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001129 285.0
LYD1_k127_3604354_21 HD domain K02660,K07315,K07814,K17763 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002858 283.0
LYD1_k127_3604354_22 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007822 248.0
LYD1_k127_3604354_23 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006921 250.0
LYD1_k127_3604354_24 histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000045 270.0
LYD1_k127_3604354_25 Adenylate cyclase K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000007036 243.0
LYD1_k127_3604354_26 Two component transcriptional regulator, winged helix family - - - 0.0000000000000000000000000000000000000000000000000000001106 204.0
LYD1_k127_3604354_27 PFAM Uncharacterised protein, DegV family COG1307 - - - 0.0000000000000000000000000000000000000000000000002624 186.0
LYD1_k127_3604354_28 4-vinyl reductase, 4VR - - - 0.0000000000000000000000000000000000000000000000142 178.0
LYD1_k127_3604354_29 aspartic-type endopeptidase activity K02236,K02506,K02654 - 3.4.23.43 0.0000000000000000000000000000000000000000000006678 182.0
LYD1_k127_3604354_3 PFAM Cys Met metabolism pyridoxal-phosphate-dependent protein K01740 - 2.5.1.49 9.185e-230 716.0
LYD1_k127_3604354_30 Belongs to the thioredoxin family K03671 GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 - 0.0000000000000000000000000000000000000000000144 164.0
LYD1_k127_3604354_31 Pterin 4 alpha carbinolamine dehydratase K01724 - 4.2.1.96 0.0000000000000000000000000000000000000000001858 163.0
LYD1_k127_3604354_32 phosphorelay sensor kinase activity K01768,K02482,K02584,K07673,K10819 - 2.7.13.3,4.6.1.1 0.00000000000000000000000000000005643 138.0
LYD1_k127_3604354_33 OsmC-like protein K07397 - - 0.00000000000000000000000003252 113.0
LYD1_k127_3604354_34 bacterial-type flagellum-dependent cell motility - - - 0.000000000000000004788 97.0
LYD1_k127_3604354_35 Histidine kinase - - - 0.0001186 54.0
LYD1_k127_3604354_4 Protein of unknown function, DUF255 K06888 - - 1.793e-228 726.0
LYD1_k127_3604354_5 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 1.336e-211 663.0
LYD1_k127_3604354_6 Acetyl-CoA hydrolase/transferase N-terminal domain - - - 3.019e-207 651.0
LYD1_k127_3604354_7 Penicillin-Binding Protein C-terminus Family - - - 6.31e-201 654.0
LYD1_k127_3604354_8 N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity K00819,K00821 GO:0003674,GO:0003824,GO:0004587,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006525,GO:0006527,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009987,GO:0016054,GO:0016740,GO:0016769,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 2.6.1.11,2.6.1.13,2.6.1.17 1.772e-194 614.0
LYD1_k127_3604354_9 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 490.0
LYD1_k127_3685375_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004654,GO:0005488,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 0.0 1031.0
LYD1_k127_3685375_1 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017101,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.15 9.561e-253 785.0
LYD1_k127_3685375_10 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.0000000000000000000000000000000000000000000000000000000004953 215.0
LYD1_k127_3685375_11 Domain of unknown function (DUF4332) - - - 0.000000000000000000000000000000000000000000000000001618 185.0
LYD1_k127_3685375_12 cytokinin biosynthetic process K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000001634 172.0
LYD1_k127_3685375_13 MazG-like family - - - 0.0000000000000000000000000000001192 127.0
LYD1_k127_3685375_14 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000007812 123.0
LYD1_k127_3685375_16 Peptidase family M48 - - - 0.000000000000000000000243 108.0
LYD1_k127_3685375_17 Domain of unknown function (DUF4190) - - - 0.000000000000000003623 87.0
LYD1_k127_3685375_18 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000000148 73.0
LYD1_k127_3685375_19 Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.00000000004746 74.0
LYD1_k127_3685375_2 Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 617.0
LYD1_k127_3685375_20 Protein of unknown function (DUF1679) - - - 0.000000000122 73.0
LYD1_k127_3685375_21 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0001212 54.0
LYD1_k127_3685375_3 PFAM ABC transporter related K06158 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009428 459.0
LYD1_k127_3685375_4 Polynucleotide adenylyltransferase region K00974 - 2.7.7.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 439.0
LYD1_k127_3685375_5 ADP binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000461 422.0
LYD1_k127_3685375_6 Hsp70 protein K04046 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004179 290.0
LYD1_k127_3685375_7 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02109 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003301 259.0
LYD1_k127_3685375_8 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003657 252.0
LYD1_k127_3685375_9 Membrane dipeptidase (Peptidase family M19) - - - 0.00000000000000000000000000000000000000000000000000000000000000141 233.0
LYD1_k127_3714026_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 5.4e-323 1014.0
LYD1_k127_3730234_0 PFAM glycosyl transferase, family 51 - - - 0.0 1226.0
LYD1_k127_3730234_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 0.0 1052.0
LYD1_k127_3730234_10 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K07141 - 2.7.7.76 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001908 336.0
LYD1_k127_3730234_11 Hydrolase, alpha beta domain protein K01048 - 3.1.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002598 310.0
LYD1_k127_3730234_12 Protein of unknown function (DUF554) K07150 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007165 297.0
LYD1_k127_3730234_13 N-4 methylation of cytosine K00590 - 2.1.1.113 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000695 307.0
LYD1_k127_3730234_14 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003996 294.0
LYD1_k127_3730234_15 succinylglutamate desuccinylase aspartoacylase K07402 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004254 273.0
LYD1_k127_3730234_16 PFAM Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.00000000000000000000000000000000000000000000000000000000002162 212.0
LYD1_k127_3730234_17 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.00000000000000000000000000000000000000000000000000002524 194.0
LYD1_k127_3730234_18 MaoC like domain - - - 0.000000000000000000000000000000000000000000000000001211 188.0
LYD1_k127_3730234_19 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K07141 - 2.7.7.76 0.000000000000000000000000000000000000000000000000007885 188.0
LYD1_k127_3730234_2 adenosylmethionine-8-amino-7-oxononanoate transaminase activity K15372 - 2.6.1.55 8.757e-225 704.0
LYD1_k127_3730234_20 PFAM GCN5-related N-acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000608 188.0
LYD1_k127_3730234_21 PFAM ATPase associated with various cellular activities, AAA_5 - - - 0.000000000000000000000000000000000000000000000004788 173.0
LYD1_k127_3730234_22 DSBA-like thioredoxin domain - - - 0.00000000000000000000000000000000000000002064 163.0
LYD1_k127_3730234_23 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000000000000005063 142.0
LYD1_k127_3730234_24 4-vinyl reductase, 4VR - - - 0.0000000000000000000000000000000001276 140.0
LYD1_k127_3730234_25 Cyclic-di-AMP receptor - - - 0.000000000000000000000000000000000505 134.0
LYD1_k127_3730234_26 - - - - 0.0000000000000000000000001064 112.0
LYD1_k127_3730234_27 Cyclic-di-AMP receptor - - - 0.000000000000000000000003418 104.0
LYD1_k127_3730234_3 His Kinase A (phosphoacceptor) domain - - - 8.36e-214 696.0
LYD1_k127_3730234_4 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 7.079e-204 666.0
LYD1_k127_3730234_5 CO dehydrogenase flavoprotein C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003623 546.0
LYD1_k127_3730234_7 Belongs to the adenylyl cyclase class-4 guanylyl cyclase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002412 422.0
LYD1_k127_3730234_8 Glycosyl hydrolase family 20, catalytic domain K12373 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009453 421.0
LYD1_k127_3730234_9 RNA-binding PUA-like domain of methyltransferase RsmF - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 415.0
LYD1_k127_3770651_0 glycosyl hydrolase 38 domain protein K01191 - 3.2.1.24 0.0 1325.0
LYD1_k127_3770651_1 PFAM type II secretion system protein E K02283 - - 3.974e-208 654.0
LYD1_k127_3770651_10 Enoyl-(Acyl carrier protein) reductase K00059,K00068 - 1.1.1.100,1.1.1.140 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006572 341.0
LYD1_k127_3770651_11 PFAM Biotin lipoate A B protein ligase K03800 - 6.3.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002404 312.0
LYD1_k127_3770651_12 Transcriptional regulatory protein, C terminal K07667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005218 302.0
LYD1_k127_3770651_13 PFAM thymidine kinase K00857 GO:0003674,GO:0003824,GO:0004797,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006259,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009157,GO:0009162,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019136,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046104,GO:0046125,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:0090407,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001422 289.0
LYD1_k127_3770651_14 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 299.0
LYD1_k127_3770651_15 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000003661 244.0
LYD1_k127_3770651_16 Binds the 23S rRNA K02909 - - 0.000000000000000000000000000000000000000000000000000000000000004817 220.0
LYD1_k127_3770651_17 PFAM dihydrodipicolinate synthetase K01714,K21062 - 3.5.4.22,4.3.3.7 0.0000000000000000000000000000000000000000000000000001418 201.0
LYD1_k127_3770651_18 sequence-specific DNA binding - - - 0.0000000000000000000000000000000000000000000000004162 183.0
LYD1_k127_3770651_19 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000000000000000000000168 177.0
LYD1_k127_3770651_2 PFAM extracellular solute-binding protein, family 5 K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008206 601.0
LYD1_k127_3770651_20 Histidine kinase - - - 0.000000000000000000000000000000000000000000003384 179.0
LYD1_k127_3770651_21 Protein of unknown function (DUF4230) - - - 0.0000000000000000000000000000000000000009756 156.0
LYD1_k127_3770651_22 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000004197 141.0
LYD1_k127_3770651_23 Ribosomal L27 protein K02899 - - 0.000000000000000000000000000000003595 130.0
LYD1_k127_3770651_24 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.00000000000000000000000000004068 119.0
LYD1_k127_3770651_25 - - - - 0.0000000000000000000000009674 106.0
LYD1_k127_3770651_26 RNA-binding protein - - - 0.00000000000000000000004299 102.0
LYD1_k127_3770651_27 Protein of unknown function (DUF503) K09764 - - 0.000000000000000000000125 101.0
LYD1_k127_3770651_29 Two component transcriptional regulator, winged helix family K14981 - - 0.0000000003141 66.0
LYD1_k127_3770651_3 Protein of unknown function (DUF4127) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008388 558.0
LYD1_k127_3770651_4 Oligopeptide/dipeptide transporter, C-terminal region K02032 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005094 511.0
LYD1_k127_3770651_5 Oligopeptide/dipeptide transporter, C-terminal region K02031,K02032,K15583 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008493 430.0
LYD1_k127_3770651_6 Binding-protein-dependent transport system inner membrane component K00759,K02033 - 2.4.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 419.0
LYD1_k127_3770651_7 PFAM Polynucleotide adenylyltransferase region K00970,K00974 - 2.7.7.19,2.7.7.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003342 409.0
LYD1_k127_3770651_8 N-terminal TM domain of oligopeptide transport permease C K02034,K15582 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006828 370.0
LYD1_k127_3770651_9 PhoQ Sensor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002743 350.0
LYD1_k127_3790743_0 GHMP kinases C terminal K07031 - 2.7.1.168 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006784 412.0
LYD1_k127_3790743_1 PFAM Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006919 274.0
LYD1_k127_3790743_10 PFAM Transposase IS116 IS110 IS902 family - - - 0.00000000000000000000000000000104 124.0
LYD1_k127_3790743_11 Glycosyltransferase like family 2 - - - 0.00000000000000000003814 93.0
LYD1_k127_3790743_12 PFAM glycosyl transferase family 2 - - - 0.000000000000003761 74.0
LYD1_k127_3790743_13 Uncharacterised nucleotidyltransferase - - - 0.0000000000004545 73.0
LYD1_k127_3790743_14 LysM domain - - - 0.000000003458 69.0
LYD1_k127_3790743_15 Transposase, Mutator family - - - 0.0000439 46.0
LYD1_k127_3790743_16 ABC transporter K06147 - - 0.000307 45.0
LYD1_k127_3790743_17 - - - - 0.000369 46.0
LYD1_k127_3790743_2 Archaeal Type IV pilin, N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005949 286.0
LYD1_k127_3790743_3 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000549 211.0
LYD1_k127_3790743_4 CAAX protease self-immunity K07052 - - 0.00000000000000000000000000000000000000000000000000001663 207.0
LYD1_k127_3790743_5 Transferase hexapeptide repeat K00966 - 2.7.7.13 0.0000000000000000000000000000000000000000000000000006034 193.0
LYD1_k127_3790743_6 - - - - 0.00000000000000000000000000000000000000000000000005874 199.0
LYD1_k127_3790743_7 Protein of unknown function (DUF1616) - - - 0.00000000000000000000000000000000000000000005597 172.0
LYD1_k127_3790743_8 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000398 162.0
LYD1_k127_3790743_9 Phage integrase family - - - 0.00000000000000000000000000000000000001466 151.0
LYD1_k127_3815234_0 Subunit R is required for both nuclease and ATPase activities, but not for modification K01153 - 3.1.21.3 0.0 1311.0
LYD1_k127_3815234_1 Arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 5.144e-265 827.0
LYD1_k127_3815234_10 - - - - 0.0000000000000002133 87.0
LYD1_k127_3815234_11 - - - - 0.0000000000000025 82.0
LYD1_k127_3815234_12 COG3209 Rhs family protein - - - 0.0000000000002768 75.0
LYD1_k127_3815234_13 tRNA processing K15447 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016300,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.211 0.00004278 53.0
LYD1_k127_3815234_14 Belongs to the 'phage' integrase family - - - 0.00007029 55.0
LYD1_k127_3815234_15 WD domain, G-beta repeat K14855 GO:0000027,GO:0001501,GO:0001655,GO:0001701,GO:0001756,GO:0001822,GO:0001824,GO:0001825,GO:0001826,GO:0003002,GO:0003674,GO:0005102,GO:0005112,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005840,GO:0006996,GO:0007154,GO:0007165,GO:0007166,GO:0007219,GO:0007275,GO:0007346,GO:0007389,GO:0008150,GO:0009653,GO:0009790,GO:0009792,GO:0009887,GO:0009888,GO:0009892,GO:0009952,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010466,GO:0010605,GO:0010646,GO:0010647,GO:0010648,GO:0010941,GO:0010951,GO:0016043,GO:0019222,GO:0022607,GO:0022613,GO:0022618,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030111,GO:0030154,GO:0030162,GO:0030177,GO:0031323,GO:0031324,GO:0031974,GO:0031981,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032991,GO:0034622,GO:0035282,GO:0042254,GO:0042255,GO:0042273,GO:0042592,GO:0042981,GO:0043009,GO:0043066,GO:0043067,GO:0043069,GO:0043086,GO:0043154,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043281,GO:0043933,GO:0044085,GO:0044092,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045786,GO:0045861,GO:0045930,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048646,GO:0048705,GO:0048731,GO:0048856,GO:0048869,GO:0048872,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051336,GO:0051346,GO:0051716,GO:0051726,GO:0052547,GO:0052548,GO:0060255,GO:0060429,GO:0060548,GO:0060828,GO:0061053,GO:0061484,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070925,GO:0071826,GO:0071840,GO:0072001,GO:0080090,GO:0090263,GO:1990904,GO:2000116,GO:2000117,GO:2001233,GO:2001234,GO:2001267,GO:2001268 - 0.0001328 53.0
LYD1_k127_3815234_16 ribonuclease BN K07058 - - 0.0004662 49.0
LYD1_k127_3815234_2 cyclic 2,3-diphosphoglycerate synthetase activity - - - 4.947e-236 735.0
LYD1_k127_3815234_3 Involved in the tonB-independent uptake of proteins K01771 - 4.6.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 454.0
LYD1_k127_3815234_4 PFAM DNA methylase N-4 N-6 K00571,K07316 - 2.1.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001128 298.0
LYD1_k127_3815234_5 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.0000000000000000000000000000000000000000000000000000000005411 214.0
LYD1_k127_3815234_6 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000000000000000000003969 161.0
LYD1_k127_3815234_7 TIGRFAM RHS repeat-associated core - - - 0.000000000000000000000000000005129 131.0
LYD1_k127_3815234_8 Transposase - - - 0.0000000000000000000000000002064 117.0
LYD1_k127_3815234_9 Binds directly to 16S ribosomal RNA K02968 - - 0.000000000000000000001221 97.0
LYD1_k127_3836650_0 Acetylornithine deacetylase K01438,K01439 - 3.5.1.16,3.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000039 515.0
LYD1_k127_3836650_1 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 - - 0.000000000000000000000000000000000000000000000000000000000000000000004682 237.0
LYD1_k127_3836650_2 Part of the MsrPQ system that repairs oxidized cell envelope proteins containing methionine sulfoxide residues (Met- O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated cell envelope proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain K17247 - - 0.00000000000000000000000000000000000001082 153.0
LYD1_k127_3856803_0 Converts the aldose L-fucose into the corresponding ketose L-fuculose - - - 3.945e-232 726.0
LYD1_k127_3856803_1 PFAM FGGY family of carbohydrate kinases, N-terminal domain K00854 - 2.7.1.17 1.269e-219 691.0
LYD1_k127_3856803_2 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00002085 49.0
LYD1_k127_3876099_0 PFAM Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002229 498.0
LYD1_k127_3876099_1 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007035 461.0
LYD1_k127_3876099_10 Domain of unknown function DUF11 - - - 0.0000000000000000000000000000000000000000000000000007436 201.0
LYD1_k127_3876099_11 Carotenoid biosynthesis protein - - - 0.0000000000000000000000000000000000161 145.0
LYD1_k127_3876099_12 Cytochrome c - - - 0.000000000001633 72.0
LYD1_k127_3876099_13 extracellular matrix structural constituent - - - 0.000000001029 73.0
LYD1_k127_3876099_2 Domain of unknown function DUF11 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004489 430.0
LYD1_k127_3876099_3 PFAM Cytochrome C assembly protein K02195 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009566 335.0
LYD1_k127_3876099_4 Pfam Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004429 337.0
LYD1_k127_3876099_5 PFAM ABC transporter related K02193 - 3.6.3.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007753 331.0
LYD1_k127_3876099_6 PFAM cytochrome c-type biogenesis protein CcmB K02194 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003262 323.0
LYD1_k127_3876099_7 Carboxylesterase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001671 286.0
LYD1_k127_3876099_8 peptidoglycan turnover - - - 0.0000000000000000000000000000000000000000000000000000000000000003549 236.0
LYD1_k127_3876099_9 domain protein - - - 0.0000000000000000000000000000000000000000000000000000000004851 233.0
LYD1_k127_4016_0 Tetratricopeptide repeat containing protein - - - 3.923e-205 666.0
LYD1_k127_4016_1 lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000336 313.0
LYD1_k127_4016_2 - - - - 0.00000000000000000000000000000000000000000000002848 186.0
LYD1_k127_4046224_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003451 577.0
LYD1_k127_4046224_1 PFAM carbohydrate kinase K00848,K00851,K00854,K00862 - 2.7.1.12,2.7.1.17,2.7.1.215,2.7.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006655 568.0
LYD1_k127_4046224_10 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003944 303.0
LYD1_k127_4046224_11 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001387 280.0
LYD1_k127_4046224_12 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004174 278.0
LYD1_k127_4046224_13 Forms part of the polypeptide exit tunnel K02926 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000154 274.0
LYD1_k127_4046224_14 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005373 273.0
LYD1_k127_4046224_15 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006234 274.0
LYD1_k127_4046224_16 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005631 258.0
LYD1_k127_4046224_17 NmrA-like family K00329,K00356 - 1.6.5.3,1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000001816 258.0
LYD1_k127_4046224_18 Cna B domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001399 282.0
LYD1_k127_4046224_19 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 GO:0003674,GO:0003824,GO:0004139,GO:0005975,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009262,GO:0009264,GO:0009987,GO:0016052,GO:0016829,GO:0016830,GO:0016832,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 4.1.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000001407 251.0
LYD1_k127_4046224_2 TIGRFAM MazG family protein K02499 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000517 561.0
LYD1_k127_4046224_20 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000517 235.0
LYD1_k127_4046224_21 Putative cyclase K07130 - 3.5.1.9 0.0000000000000000000000000000000000000000000000000000000000000000001415 235.0
LYD1_k127_4046224_22 Clostripain family - - - 0.0000000000000000000000000000000000000000000000000000000000000000001912 235.0
LYD1_k127_4046224_23 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000001937 213.0
LYD1_k127_4046224_24 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000001048 211.0
LYD1_k127_4046224_25 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000002086 211.0
LYD1_k127_4046224_26 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000001193 208.0
LYD1_k127_4046224_27 carboxylic acid catabolic process - - - 0.0000000000000000000000000000000000000000000000000000000471 211.0
LYD1_k127_4046224_28 Involved in the binding of tRNA to the ribosomes K02946 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000001682 195.0
LYD1_k127_4046224_29 Phosphatidylethanolamine-binding protein K06910 - - 0.000000000000000000000000000000000000000000000000000000171 202.0
LYD1_k127_4046224_3 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002725 477.0
LYD1_k127_4046224_30 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000001137 190.0
LYD1_k127_4046224_31 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.0000000000000000000000000000000000000000000000000002117 187.0
LYD1_k127_4046224_32 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.000000000000000000000000000000000000000000000000000715 186.0
LYD1_k127_4046224_33 Binds to the 23S rRNA K02876 - - 0.00000000000000000000000000000000000000000000000001226 184.0
LYD1_k127_4046224_34 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.0000000000000000000000000000000000000000000001165 169.0
LYD1_k127_4046224_35 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000001092 164.0
LYD1_k127_4046224_36 One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000506 159.0
LYD1_k127_4046224_37 Ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000001146 158.0
LYD1_k127_4046224_38 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000001201 147.0
LYD1_k127_4046224_39 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.000000000000000000000000000000005761 130.0
LYD1_k127_4046224_4 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002971 461.0
LYD1_k127_4046224_40 Domain of unknown function (DUF309) K09763 - - 0.00000000000000000000000000000009427 129.0
LYD1_k127_4046224_41 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000002039 115.0
LYD1_k127_4046224_42 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.000000000000000000000000001771 113.0
LYD1_k127_4046224_43 Ribosomal protein L30 K02907 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000005606 88.0
LYD1_k127_4046224_44 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000001698 81.0
LYD1_k127_4046224_45 Belongs to the universal ribosomal protein uL29 family K02904 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000001997 78.0
LYD1_k127_4046224_46 Belongs to the bacterial ribosomal protein bL36 family K02919 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000003495 65.0
LYD1_k127_4046224_5 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005811 353.0
LYD1_k127_4046224_6 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005821 339.0
LYD1_k127_4046224_7 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001557 331.0
LYD1_k127_4046224_8 protein (ATP-grasp superfamily) K07159 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002577 336.0
LYD1_k127_4046224_9 Enoyl-(Acyl carrier protein) reductase K10780 - 1.3.1.104 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003253 312.0
LYD1_k127_4088606_0 PFAM alpha-2-macroglobulin domain protein K06894 - - 0.0 2103.0
LYD1_k127_4088606_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.0 1039.0
LYD1_k127_4088606_10 xylulokinase activity K00854 - 2.7.1.17 5.397e-198 628.0
LYD1_k127_4088606_100 low-complexity proteins - - - 0.00000000000000000000001294 117.0
LYD1_k127_4088606_101 arsR family transcriptional regulator K21903 - - 0.00000000000000000000021 99.0
LYD1_k127_4088606_102 - - - - 0.0000000000000000000002402 99.0
LYD1_k127_4088606_103 Domain of unknown function (DUF4129) - - - 0.000000000000000000000902 106.0
LYD1_k127_4088606_104 Bacterial extracellular solute-binding protein K02027 - - 0.000000000000000000007475 107.0
LYD1_k127_4088606_105 Anti-sigma-K factor rskA - - - 0.000000000000000001875 94.0
LYD1_k127_4088606_106 - - - - 0.00000000000000007719 88.0
LYD1_k127_4088606_107 Antibiotic biosynthesis monooxygenase - - - 0.000000000000004712 79.0
LYD1_k127_4088606_108 Mediates influx of magnesium ions K03284,K16074 - - 0.00000000000001141 75.0
LYD1_k127_4088606_109 COG3209 Rhs family protein - - - 0.000000000001032 81.0
LYD1_k127_4088606_11 PFAM DNA methylase K07319 - 2.1.1.72 5.706e-194 626.0
LYD1_k127_4088606_110 Caspase domain - - - 0.00000000001657 78.0
LYD1_k127_4088606_111 - - - - 0.0000000001697 65.0
LYD1_k127_4088606_112 4Fe-4S dicluster domain - - - 0.0000000002734 64.0
LYD1_k127_4088606_113 Protein of unknown function (DUF3105) - - - 0.0000000006636 68.0
LYD1_k127_4088606_114 - - - - 0.000000003054 68.0
LYD1_k127_4088606_115 PFAM Polyketide cyclase dehydrase - - - 0.000000003503 63.0
LYD1_k127_4088606_116 Mycolic acid cyclopropane synthetase K15467 - 2.1.1.315 0.000000005076 68.0
LYD1_k127_4088606_117 - - - - 0.00000007265 61.0
LYD1_k127_4088606_118 - - - - 0.000000152 61.0
LYD1_k127_4088606_12 Domain of unknown function (DUF5107) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004458 582.0
LYD1_k127_4088606_120 PFAM transposase, IS4 family protein - - - 0.0000009651 52.0
LYD1_k127_4088606_121 Belongs to the glycosyl hydrolase 28 family - - - 0.00002731 55.0
LYD1_k127_4088606_122 acetyltransferase involved in intracellular survival and related acetyltransferases - - - 0.0005513 51.0
LYD1_k127_4088606_13 ABC transporter transmembrane region K06147,K06148 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002923 561.0
LYD1_k127_4088606_14 beta-galactosidase activity K01190,K17624 - 3.2.1.23,3.2.1.97 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004383 548.0
LYD1_k127_4088606_15 COGs COG1132 ABC-type multidrug transport system ATPase and permease components K06147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 541.0
LYD1_k127_4088606_16 PFAM ABC transporter related K06158 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 529.0
LYD1_k127_4088606_17 heat shock protein binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008614 534.0
LYD1_k127_4088606_18 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003077 487.0
LYD1_k127_4088606_19 Histidine kinase-like ATPases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002103 459.0
LYD1_k127_4088606_2 PFAM Cytochrome C assembly protein K02198 - - 5e-324 1003.0
LYD1_k127_4088606_20 ABC transporter K06158 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000441 453.0
LYD1_k127_4088606_21 ATPase associated with various cellular K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009774 438.0
LYD1_k127_4088606_22 serine-type peptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001908 437.0
LYD1_k127_4088606_23 Domain of unknown function (DUF362) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007197 439.0
LYD1_k127_4088606_24 Multicopper oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008284 428.0
LYD1_k127_4088606_25 PFAM HI0933-like protein K07007 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 424.0
LYD1_k127_4088606_26 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005658 411.0
LYD1_k127_4088606_27 serine-type peptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003813 408.0
LYD1_k127_4088606_28 ErfK ybiS ycfS ynhG family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008771 404.0
LYD1_k127_4088606_29 COGs COG1136 ABC-type antimicrobial peptide transport system ATPase component K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005952 392.0
LYD1_k127_4088606_3 Heavy-metal-associated domain K17686 - 3.6.3.54 5.755e-277 867.0
LYD1_k127_4088606_30 Beta-L-arabinofuranosidase, GH127 K09955 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002418 406.0
LYD1_k127_4088606_31 polygalacturonase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003168 389.0
LYD1_k127_4088606_32 nitrogen compound transport K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001449 371.0
LYD1_k127_4088606_33 NB-ARC domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001969 384.0
LYD1_k127_4088606_34 Protein of unknown function DUF58 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 354.0
LYD1_k127_4088606_35 Histidine kinase K07680,K07778,K11617,K14988 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 353.0
LYD1_k127_4088606_36 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006611 344.0
LYD1_k127_4088606_37 heat shock protein binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007559 348.0
LYD1_k127_4088606_38 transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002505 343.0
LYD1_k127_4088606_39 Cation efflux family K16264 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000297 331.0
LYD1_k127_4088606_4 heavy metal translocating P-type ATPase K01533 - 3.6.3.4 6.448e-273 865.0
LYD1_k127_4088606_40 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001723 336.0
LYD1_k127_4088606_41 Vitamin k epoxide reductase K00368 - 1.7.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007148 329.0
LYD1_k127_4088606_42 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002646 333.0
LYD1_k127_4088606_43 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 309.0
LYD1_k127_4088606_44 Family 4 glycosyl hydrolase K01222,K07406 - 3.2.1.22,3.2.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001481 305.0
LYD1_k127_4088606_45 peptidoglycan turnover - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002262 299.0
LYD1_k127_4088606_46 transmembrane transport K02025,K05814,K10118,K10237,K10241,K15771,K17235,K17316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005461 295.0
LYD1_k127_4088606_47 iron ion binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007487 289.0
LYD1_k127_4088606_48 Helix-turn-helix type 11 domain protein K13572 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002064 282.0
LYD1_k127_4088606_49 glycerophosphodiester transmembrane transport K02026 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004753 274.0
LYD1_k127_4088606_5 Type III restriction enzyme, res subunit - - - 6.709e-253 807.0
LYD1_k127_4088606_50 nitroreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001342 267.0
LYD1_k127_4088606_51 Rhodanese Homology Domain K01011 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000003121 271.0
LYD1_k127_4088606_52 response regulator K02479,K07695 GO:0001666,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0005575,GO:0005576,GO:0005615,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006355,GO:0006950,GO:0008150,GO:0009405,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010565,GO:0010604,GO:0010628,GO:0016020,GO:0018995,GO:0019216,GO:0019217,GO:0019219,GO:0019222,GO:0022611,GO:0030312,GO:0030430,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032502,GO:0033643,GO:0033646,GO:0033647,GO:0033648,GO:0033655,GO:0036293,GO:0043656,GO:0043657,GO:0044174,GO:0044215,GO:0044216,GO:0044217,GO:0044419,GO:0044421,GO:0044424,GO:0044444,GO:0044464,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0048583,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051704,GO:0060255,GO:0062012,GO:0065007,GO:0070482,GO:0071944,GO:0072493,GO:0080090,GO:0080134,GO:0097159,GO:0140110,GO:1901363,GO:1902680,GO:1902882,GO:1903506,GO:1903508,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005358 266.0
LYD1_k127_4088606_53 Ethylbenzene dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004008 266.0
LYD1_k127_4088606_54 carboxylic ester hydrolase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002017 248.0
LYD1_k127_4088606_55 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002202 243.0
LYD1_k127_4088606_56 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.00000000000000000000000000000000000000000000000000000000000000000004517 235.0
LYD1_k127_4088606_57 PFAM peptidase C60, sortase A and B K07284 - 3.4.22.70 0.00000000000000000000000000000000000000000000000000000000000000000005258 241.0
LYD1_k127_4088606_58 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17884 - 2.7.8.39 0.0000000000000000000000000000000000000000000000000000000000000000004456 235.0
LYD1_k127_4088606_59 hydrolase activity, acting on ester bonds - - - 0.00000000000000000000000000000000000000000000000000000000000000001383 237.0
LYD1_k127_4088606_6 FAD dependent oxidoreductase - - - 1.68e-228 720.0
LYD1_k127_4088606_60 Haloacid dehalogenase-like hydrolase K07025 - - 0.00000000000000000000000000000000000000000000000000000000000000003878 229.0
LYD1_k127_4088606_61 Psort location Cytoplasmic, score 8.87 - - - 0.00000000000000000000000000000000000000000000000000000000000000008382 229.0
LYD1_k127_4088606_62 Domain of unknown function (DUF296) K06934 - - 0.000000000000000000000000000000000000000000000000000000000000009379 218.0
LYD1_k127_4088606_63 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000001629 216.0
LYD1_k127_4088606_64 Flavin-binding monooxygenase-like K07222 - - 0.0000000000000000000000000000000000000000000000000000000001546 210.0
LYD1_k127_4088606_65 SIS domain - - - 0.00000000000000000000000000000000000000000000000000000000978 206.0
LYD1_k127_4088606_66 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000002423 202.0
LYD1_k127_4088606_67 ferredoxin-NADP+ reductase activity - - - 0.00000000000000000000000000000000000000000000000000000859 197.0
LYD1_k127_4088606_68 Kdo2-lipid A biosynthetic process K02517,K20543,K22311 - 2.3.1.241,2.3.1.265 0.0000000000000000000000000000000000000000000000000001322 198.0
LYD1_k127_4088606_69 - - - - 0.0000000000000000000000000000000000000000000000000005948 196.0
LYD1_k127_4088606_7 PFAM glycoside hydrolase, family 3 domain protein K05349 - 3.2.1.21 1.056e-218 697.0
LYD1_k127_4088606_70 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000009831 187.0
LYD1_k127_4088606_71 oxidoreductase K07222 - - 0.0000000000000000000000000000000000000000000000004757 179.0
LYD1_k127_4088606_72 Adenylate cyclase K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000004127 174.0
LYD1_k127_4088606_73 subunit of a heme lyase K02200 - - 0.00000000000000000000000000000000000000000003622 168.0
LYD1_k127_4088606_74 Flavodoxin domain K00230 - 1.3.5.3 0.000000000000000000000000000000000000000000115 165.0
LYD1_k127_4088606_75 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000000000000009522 158.0
LYD1_k127_4088606_76 Predicted membrane protein (DUF2085) - - - 0.00000000000000000000000000000000000000003297 161.0
LYD1_k127_4088606_77 COG0433 Predicted ATPase K06915 - - 0.0000000000000000000000000000000000000005329 168.0
LYD1_k127_4088606_78 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K02199 - - 0.0000000000000000000000000000000000001126 148.0
LYD1_k127_4088606_79 - - - - 0.0000000000000000000000000000000000001949 161.0
LYD1_k127_4088606_8 dipeptide transport K02035 - - 3.729e-204 650.0
LYD1_k127_4088606_80 Pfam Zn-finger in ubiquitin-hydrolases and other protein K03455 - - 0.0000000000000000000000000000000000005576 142.0
LYD1_k127_4088606_81 PFAM cytochrome c biogenesis protein, transmembrane region - - - 0.000000000000000000000000000000000001503 149.0
LYD1_k127_4088606_82 PFAM cytochrome c biogenesis protein, transmembrane region K06196 - - 0.000000000000000000000000000000000004363 148.0
LYD1_k127_4088606_84 Domain of unknown function (DUF4160) - - - 0.00000000000000000000000000000000005177 135.0
LYD1_k127_4088606_85 zinc-ribbon domain - - - 0.0000000000000000000000000000000008711 136.0
LYD1_k127_4088606_86 ECF sigma factor K03088 - - 0.000000000000000000000000000000009313 134.0
LYD1_k127_4088606_87 TolB amino-terminal domain K03641 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006810,GO:0008104,GO:0008150,GO:0009719,GO:0009987,GO:0010033,GO:0010243,GO:0015031,GO:0015833,GO:0015893,GO:0017038,GO:0019534,GO:0019904,GO:0022857,GO:0030288,GO:0030313,GO:0031975,GO:0032153,GO:0032991,GO:0033036,GO:0042221,GO:0042493,GO:0042597,GO:0042886,GO:0042891,GO:0043213,GO:0044464,GO:0044877,GO:0045184,GO:0046677,GO:0046678,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055085,GO:0070887,GO:0071236,GO:0071237,GO:0071310,GO:0071417,GO:0071495,GO:0071702,GO:0071705,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901998 - 0.00000000000000000000000000000001951 145.0
LYD1_k127_4088606_88 Ribbon-helix-helix domain - - - 0.00000000000000000000000000000005068 133.0
LYD1_k127_4088606_89 CoA-binding domain protein K06929 - - 0.0000000000000000000000000000002596 141.0
LYD1_k127_4088606_9 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0019538,GO:0030312,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 1.444e-202 653.0
LYD1_k127_4088606_90 Cytochrome c K03611 - - 0.00000000000000000000000000001518 123.0
LYD1_k127_4088606_91 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.0000000000000000000000000000911 120.0
LYD1_k127_4088606_92 PFAM blue (type 1) copper domain protein - - - 0.000000000000000000000000000638 118.0
LYD1_k127_4088606_93 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000006976 121.0
LYD1_k127_4088606_94 Rieske [2Fe-2S] domain K02636,K03886 - 1.10.9.1 0.000000000000000000000000001056 119.0
LYD1_k127_4088606_95 Protein of unknown function (DUF2442) - - - 0.000000000000000000000000008018 112.0
LYD1_k127_4088606_96 BadF/BadG/BcrA/BcrD ATPase family - - - 0.0000000000000000000000000286 121.0
LYD1_k127_4088606_97 Nitrite reductase K00368 - 1.7.2.1 0.0000000000000000000000003236 113.0
LYD1_k127_4088606_98 Putative esterase K07017 - - 0.0000000000000000000000004433 115.0
LYD1_k127_4088606_99 PFAM Response regulator receiver domain - - - 0.000000000000000000000007139 106.0
LYD1_k127_4130697_0 (ABC) transporter K06147 - - 4.979e-233 734.0
LYD1_k127_4130697_1 Glycosyl hydrolase family 10 K01181 - 3.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006298 410.0
LYD1_k127_4130697_2 inositol 2-dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000401 361.0
LYD1_k127_4130697_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002301 334.0
LYD1_k127_4130697_4 cobalamin binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004196 283.0
LYD1_k127_4130697_5 Cellulase (glycosyl hydrolase family 5) - - - 0.0000000000000000000000000000000000000000000000000000000000000000002807 236.0
LYD1_k127_4130697_6 PHP domain protein K07053 - 3.1.3.97 0.000000000000000000000000000000000000000000000000001159 191.0
LYD1_k127_4130697_7 lipolytic protein G-D-S-L family - - - 0.00000000000000001561 87.0
LYD1_k127_4130697_8 PFAM Uroporphyrinogen decarboxylase (URO-D) - - - 0.000000001775 61.0
LYD1_k127_4130697_9 polysaccharide deacetylase - - - 0.000000002395 67.0
LYD1_k127_4133984_0 4Fe-4S ferredoxin iron-sulfur binding domain protein K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0 1774.0
LYD1_k127_4133984_1 PFAM alpha-2-macroglobulin domain protein K06894 - - 0.0 1307.0
LYD1_k127_4133984_10 TIGRFAM isocitrate dehydrogenase, NADP-dependent K00031 - 1.1.1.42 2.008e-231 721.0
LYD1_k127_4133984_100 PFAM extracellular solute-binding protein family 1 - - - 0.000000000000000000000000000000000000000000000000000000001293 218.0
LYD1_k127_4133984_101 - K01992 - - 0.000000000000000000000000000000000000000000000000000000124 204.0
LYD1_k127_4133984_102 Iron-storage protein K02217 - 1.16.3.2 0.000000000000000000000000000000000000000000000000000001309 196.0
LYD1_k127_4133984_103 acyl-CoA dehydrogenase K20035 - - 0.00000000000000000000000000000000000000000000000000004308 192.0
LYD1_k127_4133984_104 aminoglycoside hydroxyurea antibiotic resistance kinase K04343 - 2.7.1.72 0.00000000000000000000000000000000000000000000000000008695 190.0
LYD1_k127_4133984_105 phosphoribosylaminoimidazole carboxylase activity K01923 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009719,GO:0009725,GO:0009733,GO:0009987,GO:0010033,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042221,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0050896,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.0000000000000000000000000000000000000000000000000002532 189.0
LYD1_k127_4133984_106 SPTR D1CI93 Phophonate C-P lyase system transcriptional regulator PhnF, GntR family K03710 - - 0.000000000000000000000000000000000000000000000000001468 190.0
LYD1_k127_4133984_107 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000001049 191.0
LYD1_k127_4133984_108 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000004922 194.0
LYD1_k127_4133984_109 Methyl-viologen-reducing hydrogenase, delta subunit - - - 0.0000000000000000000000000000000000000000000000006629 181.0
LYD1_k127_4133984_11 bifunctional purine biosynthetic protein K11788 GO:0003674,GO:0003824,GO:0004637,GO:0004641,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009112,GO:0009987,GO:0016874,GO:0016879,GO:0016882,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:1901360,GO:1901564 6.3.3.1,6.3.4.13 1.253e-219 706.0
LYD1_k127_4133984_110 aminopeptidase activity - - - 0.0000000000000000000000000000000000000000000000009704 189.0
LYD1_k127_4133984_111 sequence-specific DNA binding - - - 0.000000000000000000000000000000000000000000000001164 176.0
LYD1_k127_4133984_112 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000000000000000000001231 174.0
LYD1_k127_4133984_113 RNA polymerase, sigma-24 subunit, ECF subfamily - - - 0.000000000000000000000000000000000000000000003522 173.0
LYD1_k127_4133984_114 - - - - 0.000000000000000000000000000000000000000000005176 175.0
LYD1_k127_4133984_115 phosphohistidine phosphatase, SixA K08296 - - 0.00000000000000000000000000000000000000000003484 168.0
LYD1_k127_4133984_116 Domain of unknown function (DUF4395) - - - 0.00000000000000000000000000000000000000000004814 170.0
LYD1_k127_4133984_117 Ig-like domain from next to BRCA1 gene K13276 - - 0.0000000000000000000000000000000000000000001329 175.0
LYD1_k127_4133984_118 phosphatidate phosphatase activity K01096,K19302 - 3.1.3.27,3.1.3.4,3.1.3.81,3.6.1.27 0.0000000000000000000000000000000000000000006178 163.0
LYD1_k127_4133984_119 TIGRFAM competence damage-inducible protein CinA K03742,K03743 - 3.5.1.42 0.000000000000000000000000000000000000000001965 161.0
LYD1_k127_4133984_12 PFAM Fumarate lyase K01744 - 4.3.1.1 1.077e-216 682.0
LYD1_k127_4133984_120 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000001433 168.0
LYD1_k127_4133984_121 Protein of unknown function (DUF456) K09793 - - 0.00000000000000000000000000000000000000002338 160.0
LYD1_k127_4133984_122 LysM domain K02020 - - 0.00000000000000000000000000000000000000005621 162.0
LYD1_k127_4133984_123 TIGRFAM phosphodiesterase, MJ0936 family K07095 - - 0.000000000000000000000000000000000000001609 153.0
LYD1_k127_4133984_124 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000003578 155.0
LYD1_k127_4133984_125 JAB/MPN domain - - - 0.000000000000000000000000000000000003396 142.0
LYD1_k127_4133984_126 Belongs to the UPF0107 family K09128 - - 0.000000000000000000000000000000000005924 143.0
LYD1_k127_4133984_127 WD40-like Beta Propeller Repeat K03641 - - 0.00000000000000000000000000000001627 143.0
LYD1_k127_4133984_128 CAAX protease self-immunity - - - 0.00000000000000000000000000000003018 137.0
LYD1_k127_4133984_129 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.000000000000000000000000000004505 139.0
LYD1_k127_4133984_13 Domain of unknown function DUF87 K06915 - - 1.834e-214 680.0
LYD1_k127_4133984_130 COG0526, thiol-disulfide isomerase and thioredoxins K03671 - - 0.00000000000000000000000000001483 121.0
LYD1_k127_4133984_131 tetraacyldisaccharide 4'-kinase activity K09791 - - 0.000000000000000000000000003709 111.0
LYD1_k127_4133984_133 nuclear chromosome segregation - - - 0.000000000000000000000000335 120.0
LYD1_k127_4133984_134 PFAM BNR Asp-box repeat - - - 0.0000000000000000000000008463 115.0
LYD1_k127_4133984_135 YacP-like NYN domain K06962 - - 0.000000000000000000000001523 112.0
LYD1_k127_4133984_136 LysM domain - - - 0.000000000000000000000001537 114.0
LYD1_k127_4133984_137 nuclease activity K06218 - - 0.000000000000000000000002244 104.0
LYD1_k127_4133984_139 PFAM RNP-1 like RNA-binding protein - - - 0.00000000000000000000005169 101.0
LYD1_k127_4133984_14 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639 - 2.3.1.29 2.92e-208 653.0
LYD1_k127_4133984_140 Domain of unknown function (DUF1992) K19373 - - 0.0000000000000000000001312 102.0
LYD1_k127_4133984_141 Methyl-viologen-reducing hydrogenase, delta subunit - - - 0.0000000000000000000005607 96.0
LYD1_k127_4133984_142 ThiS family K03636 - - 0.000000000000000000002437 97.0
LYD1_k127_4133984_143 PIN domain - - - 0.000000000000000000004165 97.0
LYD1_k127_4133984_144 DinB family - - - 0.0000000000000000000614 96.0
LYD1_k127_4133984_145 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000839 96.0
LYD1_k127_4133984_146 Bacterial protein of unknown function (DUF951) - - - 0.0000000000000000004607 91.0
LYD1_k127_4133984_147 ATPases associated with a variety of cellular activities K01990 - - 0.0000000000000000008713 87.0
LYD1_k127_4133984_148 TIGRFAM daunorubicin resistance ABC transporter ATPase subunit K01990 - - 0.000000000000000001017 93.0
LYD1_k127_4133984_149 PFAM HD domain - - - 0.00000000000000001298 91.0
LYD1_k127_4133984_15 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 2.863e-206 648.0
LYD1_k127_4133984_150 Methyl-viologen-reducing hydrogenase, delta subunit - - - 0.0000000000000004994 79.0
LYD1_k127_4133984_151 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases K02503 - - 0.00000000000001725 80.0
LYD1_k127_4133984_152 ABC-2 type transporter K01992 - - 0.00000000000002266 85.0
LYD1_k127_4133984_153 PFAM Trimethylamine methyltransferase (MTTB) K14083 - 2.1.1.250 0.00000000000002901 86.0
LYD1_k127_4133984_154 - - - - 0.0000000000003521 78.0
LYD1_k127_4133984_155 PFAM type IV pilus assembly PilZ - - - 0.000000000006186 74.0
LYD1_k127_4133984_156 WD40-like Beta Propeller Repeat - - - 0.00000000004252 75.0
LYD1_k127_4133984_157 LysM domain K06194 GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 - 0.00000000007459 71.0
LYD1_k127_4133984_158 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.0000000002762 61.0
LYD1_k127_4133984_159 Uroporphyrinogen decarboxylase (URO-D) - - - 0.0000000352 65.0
LYD1_k127_4133984_16 PFAM VanW family protein - - - 6.701e-205 655.0
LYD1_k127_4133984_161 PFAM aminoglycoside hydroxyurea antibiotic resistance kinase K04343 - 2.7.1.72 0.0000001998 56.0
LYD1_k127_4133984_162 peptidase K01303 - 3.4.19.1 0.000003268 60.0
LYD1_k127_4133984_163 ATPases associated with a variety of cellular activities K01990 - - 0.000006736 51.0
LYD1_k127_4133984_164 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.000369 46.0
LYD1_k127_4133984_17 IMP dehydrogenase / GMP reductase domain K00088 - 1.1.1.205 1.556e-198 629.0
LYD1_k127_4133984_18 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 5.533e-195 617.0
LYD1_k127_4133984_19 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 581.0
LYD1_k127_4133984_2 carbohydrate binding K00702 - 2.4.1.20 0.0 1247.0
LYD1_k127_4133984_20 COGs COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 594.0
LYD1_k127_4133984_21 PFAM amine oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004365 575.0
LYD1_k127_4133984_22 ATPase family associated with various cellular activities (AAA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002924 571.0
LYD1_k127_4133984_23 melibiose metabolic process K01222,K07406 - 3.2.1.22,3.2.1.86 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 547.0
LYD1_k127_4133984_24 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756,K01857 - 4.3.2.2,5.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003621 543.0
LYD1_k127_4133984_25 Copper binding proteins, plastocyanin/azurin family K00368 - 1.7.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004705 536.0
LYD1_k127_4133984_26 Tagatose 6 phosphate kinase K16371 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003001 511.0
LYD1_k127_4133984_27 Mo-molybdopterin cofactor metabolic process K03148,K03636,K21029,K21147 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006732,GO:0006777,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008146,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009108,GO:0009605,GO:0009607,GO:0009987,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0016782,GO:0018130,GO:0019344,GO:0019538,GO:0019637,GO:0019720,GO:0019752,GO:0020012,GO:0030312,GO:0030682,GO:0042783,GO:0043170,GO:0043207,GO:0043436,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0050896,GO:0051186,GO:0051188,GO:0051189,GO:0051701,GO:0051704,GO:0051707,GO:0051805,GO:0051807,GO:0051810,GO:0051832,GO:0051834,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0061605,GO:0070566,GO:0071704,GO:0071944,GO:0075136,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.7.73,2.7.7.80,2.8.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007401 500.0
LYD1_k127_4133984_28 PFAM FecR protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004345 524.0
LYD1_k127_4133984_29 helix_turn_helix, Lux Regulon K03556 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 509.0
LYD1_k127_4133984_3 Glycine radical enzyme that catalyzes the cleavage of a C-N bond in choline, producing trimethylamine (TMA) and acetaldehyde K00656,K20038 - 2.3.1.54,4.3.99.4 0.0 1226.0
LYD1_k127_4133984_30 GHMP kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 463.0
LYD1_k127_4133984_31 Aldo Keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002388 449.0
LYD1_k127_4133984_32 SAICAR synthetase K01923 - 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 446.0
LYD1_k127_4133984_33 PFAM conserved K07027 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001567 436.0
LYD1_k127_4133984_34 Glucose dehydrogenase C-terminus - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001609 437.0
LYD1_k127_4133984_35 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000234 440.0
LYD1_k127_4133984_36 Glycosyltransferase 28 domain K03715 - 2.4.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003114 428.0
LYD1_k127_4133984_37 Zinc-binding dehydrogenase K13953 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 425.0
LYD1_k127_4133984_38 heterodisulfide reductase K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002239 425.0
LYD1_k127_4133984_39 ABC-type multidrug transport system ATPase K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 413.0
LYD1_k127_4133984_4 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.0 1152.0
LYD1_k127_4133984_40 PFAM Methylenetetrahydrofolate reductase K00297,K00547 - 1.5.1.20,2.1.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003948 406.0
LYD1_k127_4133984_41 glutamine-fructose-6-phosphate transaminase (isomerizing) activity K00820,K15916 - 2.6.1.16,5.3.1.8,5.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009925 396.0
LYD1_k127_4133984_42 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003631 400.0
LYD1_k127_4133984_43 SIS domain K00820 - 2.6.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008796 391.0
LYD1_k127_4133984_44 Pyridoxal-phosphate dependent enzyme K12339 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009569 372.0
LYD1_k127_4133984_45 PFAM Shikimate quinate 5-dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003617 370.0
LYD1_k127_4133984_46 Family 4 glycosyl hydrolase K07406 - 3.2.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007926 364.0
LYD1_k127_4133984_47 Electron transfer flavoprotein FAD-binding domain K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001901 355.0
LYD1_k127_4133984_48 Protein of unknown function (DUF521) K09123 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009882 356.0
LYD1_k127_4133984_49 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001684 348.0
LYD1_k127_4133984_5 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 4.195e-295 915.0
LYD1_k127_4133984_50 transmembrane transport K02025,K05814,K10118,K10237,K10241,K15771,K17235,K17316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 342.0
LYD1_k127_4133984_51 TIGRFAM glycyl-radical enzyme activating protein family K04069 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001688 342.0
LYD1_k127_4133984_52 Psort location Cytoplasmic, score - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003251 344.0
LYD1_k127_4133984_53 COG1131 ABC-type multidrug transport system, ATPase component K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003239 338.0
LYD1_k127_4133984_54 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005082 340.0
LYD1_k127_4133984_55 RNA cap guanine-N2 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004289 330.0
LYD1_k127_4133984_56 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 319.0
LYD1_k127_4133984_57 dioxygenase activity K00477 - 1.14.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001942 318.0
LYD1_k127_4133984_58 PFAM deoxyribose-phosphate aldolase phospho-2-dehydro-3-deoxyheptonate aldolase K01635 - 4.1.2.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002428 319.0
LYD1_k127_4133984_59 PFAM LmbE family protein K18455 - 3.5.1.115 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002261 312.0
LYD1_k127_4133984_6 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 3.103e-291 923.0
LYD1_k127_4133984_60 Electron transfer flavoprotein K03521 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016020,GO:0016491,GO:0022900,GO:0030312,GO:0040007,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0055114,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002563 312.0
LYD1_k127_4133984_61 Xylose isomerase-like TIM barrel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006442 310.0
LYD1_k127_4133984_62 PFAM Methylene-tetrahydrofolate reductase C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003934 304.0
LYD1_k127_4133984_63 Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 311.0
LYD1_k127_4133984_64 peptidyl-tyrosine sulfation K00525,K01768 - 1.17.4.1,4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000274 306.0
LYD1_k127_4133984_65 DeoR C terminal sensor domain K02081 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004046 304.0
LYD1_k127_4133984_66 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K02564 - 3.5.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002671 301.0
LYD1_k127_4133984_67 3-octaprenyl-4-hydroxybenzoate carboxy-lyase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000374 309.0
LYD1_k127_4133984_68 metabolite transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 303.0
LYD1_k127_4133984_69 Winged helix DNA-binding domain K09927 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000738 304.0
LYD1_k127_4133984_7 binding domain K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 1.83e-267 857.0
LYD1_k127_4133984_70 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007727 292.0
LYD1_k127_4133984_71 glycerophosphodiester transmembrane transport K02026 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 291.0
LYD1_k127_4133984_72 Acyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002903 296.0
LYD1_k127_4133984_73 Protein of unknown function (DUF692) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006818 284.0
LYD1_k127_4133984_74 Prephenate dehydrogenase K04517 - 1.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001405 280.0
LYD1_k127_4133984_75 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001244 284.0
LYD1_k127_4133984_76 carbohydrate transport K02027 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006939 278.0
LYD1_k127_4133984_77 Phosphoribosyl transferase domain K00759 - 2.4.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000003459 262.0
LYD1_k127_4133984_78 Periplasmic binding protein LacI transcriptional regulator K02529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001044 258.0
LYD1_k127_4133984_79 molybdenum cofactor guanylyltransferase activity K03752,K13818 GO:0003674,GO:0003824,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.77 0.00000000000000000000000000000000000000000000000000000000000000000000007666 248.0
LYD1_k127_4133984_8 nuclear chromosome segregation - - - 2.408e-261 830.0
LYD1_k127_4133984_80 iron dependent repressor K03709 - - 0.00000000000000000000000000000000000000000000000000000000000000000002848 238.0
LYD1_k127_4133984_81 ABC transporter permease K02025 - - 0.0000000000000000000000000000000000000000000000000000000000000000001126 241.0
LYD1_k127_4133984_82 PFAM phospholipase D Transphosphatidylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000009369 241.0
LYD1_k127_4133984_83 membrane K08978 - - 0.000000000000000000000000000000000000000000000000000000000000000001622 229.0
LYD1_k127_4133984_86 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000003545 230.0
LYD1_k127_4133984_87 Nucleoside H+ symporter K05820 - - 0.0000000000000000000000000000000000000000000000000000000000000001435 236.0
LYD1_k127_4133984_88 Peptidase M50 - - - 0.0000000000000000000000000000000000000000000000000000000000000001481 227.0
LYD1_k127_4133984_89 Binding-protein-dependent transport system inner membrane component K02026 - - 0.000000000000000000000000000000000000000000000000000000000000001293 228.0
LYD1_k127_4133984_9 beta-galactosidase activity K01190,K01219,K12308 - 3.2.1.23,3.2.1.81 3.702e-240 760.0
LYD1_k127_4133984_90 Flavodoxin-like fold - - - 0.000000000000000000000000000000000000000000000000000000000000005866 222.0
LYD1_k127_4133984_91 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.00000000000000000000000000000000000000000000000000000000000002356 223.0
LYD1_k127_4133984_92 PFAM Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000000001138 220.0
LYD1_k127_4133984_93 pfkB family carbohydrate kinase - - - 0.0000000000000000000000000000000000000000000000000000000000001508 229.0
LYD1_k127_4133984_94 very-long-chain-acyl-CoA dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000001645 223.0
LYD1_k127_4133984_95 Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine K04068 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000008035 216.0
LYD1_k127_4133984_96 Bacterial extracellular solute-binding protein K02027 - - 0.000000000000000000000000000000000000000000000000000000000001535 226.0
LYD1_k127_4133984_97 NurA - - - 0.00000000000000000000000000000000000000000000000000000000000527 222.0
LYD1_k127_4133984_98 GDP-mannose mannosyl hydrolase activity K03574 - 3.6.1.55 0.00000000000000000000000000000000000000000000000000000000008159 213.0
LYD1_k127_4133984_99 BadF/BadG/BcrA/BcrD ATPase family - - - 0.0000000000000000000000000000000000000000000000000000000001102 216.0
LYD1_k127_427192_0 ATP synthesis coupled electron transport K00336 GO:0003674,GO:0003824,GO:0003954,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0009405,GO:0010941,GO:0016020,GO:0016491,GO:0016651,GO:0030312,GO:0033668,GO:0035821,GO:0042981,GO:0043067,GO:0043069,GO:0044003,GO:0044068,GO:0044403,GO:0044419,GO:0044464,GO:0044531,GO:0044532,GO:0048037,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051536,GO:0051540,GO:0051701,GO:0051704,GO:0051817,GO:0052040,GO:0052041,GO:0052150,GO:0052248,GO:0052433,GO:0052490,GO:0055114,GO:0060548,GO:0065007,GO:0071944 1.6.5.3 6.787e-312 978.0
LYD1_k127_427192_1 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 2.113e-306 947.0
LYD1_k127_427192_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003345 446.0
LYD1_k127_427192_11 PFAM peptidase M29, aminopeptidase II K19689 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001632 442.0
LYD1_k127_427192_12 BtpA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003514 384.0
LYD1_k127_427192_13 Uncharacterised ACR (DUF711) K09157 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004073 377.0
LYD1_k127_427192_14 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 372.0
LYD1_k127_427192_15 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005043 304.0
LYD1_k127_427192_16 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338,K05580 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005638 269.0
LYD1_k127_427192_17 COG3209 Rhs family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003789 280.0
LYD1_k127_427192_18 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004308 258.0
LYD1_k127_427192_19 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.000000000000000000000000000000000000000000000000000000000000000000000008272 246.0
LYD1_k127_427192_2 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 4.34e-225 714.0
LYD1_k127_427192_20 PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000002254 211.0
LYD1_k127_427192_21 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000007757 194.0
LYD1_k127_427192_22 regulatory protein, arsR - - - 0.000000000000000000000000000000000000000000000000004495 187.0
LYD1_k127_427192_23 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.000000000000000000000000000000000000000003576 158.0
LYD1_k127_427192_24 COG3209 Rhs family protein - - - 0.00000000000000000000000000000000000000001434 174.0
LYD1_k127_427192_25 regulatory protein, arsR - - - 0.000000000000000000000000000000000000001412 156.0
LYD1_k127_427192_26 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.0000000000000000000000000000000000002331 145.0
LYD1_k127_427192_27 PFAM Nitroreductase - - - 0.000000000000000000000000000000000001439 147.0
LYD1_k127_427192_28 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.000000000000000000000000000000000005383 145.0
LYD1_k127_427192_29 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.0000000000000000000000000000000000761 139.0
LYD1_k127_427192_3 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein K00341 - 1.6.5.3 9.757e-224 715.0
LYD1_k127_427192_30 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000002584 116.0
LYD1_k127_427192_31 Type II restriction enzyme - - - 0.000000000000000007368 94.0
LYD1_k127_427192_32 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.00000000000000697 79.0
LYD1_k127_427192_33 Amidohydrolase K07045 - - 0.000000000000008502 85.0
LYD1_k127_427192_34 Plasmid stability protein K21495 - - 0.0000000000000397 75.0
LYD1_k127_427192_35 PD-(D/E)XK nuclease superfamily K10742 - 3.6.4.12 0.000001069 53.0
LYD1_k127_427192_4 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 9.241e-221 696.0
LYD1_k127_427192_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 2.099e-203 641.0
LYD1_k127_427192_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 2.504e-201 632.0
LYD1_k127_427192_7 Belongs to the FGGY kinase family K00854 - 2.7.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004295 589.0
LYD1_k127_427192_8 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 565.0
LYD1_k127_427192_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 483.0
LYD1_k127_4287497_0 Molybdopterin oxidoreductase Fe4S4 domain K00123 - 1.17.1.9 1.816e-201 631.0
LYD1_k127_4287497_1 Belongs to the thiolase family - - - 3.892e-197 622.0
LYD1_k127_4287497_10 - - - - 0.00000000000000000000000000000001639 141.0
LYD1_k127_4287497_11 - - - - 0.00000000000000000000000000005823 118.0
LYD1_k127_4287497_12 - - - - 0.00000000000000004957 86.0
LYD1_k127_4287497_13 Double zinc ribbon - - - 0.000000000003561 77.0
LYD1_k127_4287497_2 Molybdopterin oxidoreductase Fe4S4 domain K00123 - 1.17.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002446 580.0
LYD1_k127_4287497_3 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00122,K00335 - 1.17.1.9,1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003263 484.0
LYD1_k127_4287497_4 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003858 444.0
LYD1_k127_4287497_5 formate dehydrogenase (NAD+) activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006473 325.0
LYD1_k127_4287497_6 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001248 248.0
LYD1_k127_4287497_7 Phosphotransferase enzyme family K04339 - 2.7.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000007074 247.0
LYD1_k127_4287497_8 Sulfatase-modifying factor enzyme 1 - - - 0.00000000000000000000000000000000001905 147.0
LYD1_k127_4287738_0 D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase K01621 - 4.1.2.22,4.1.2.9 0.0 1464.0
LYD1_k127_4287738_1 Type III restriction protein res subunit K01153 - 3.1.21.3 2.008e-301 951.0
LYD1_k127_4287738_10 SMART alpha amylase catalytic sub domain K05343 - 3.2.1.1,5.4.99.16 1.96e-206 650.0
LYD1_k127_4287738_100 - - - - 0.0000000000000000007101 92.0
LYD1_k127_4287738_101 Belongs to the UPF0337 (CsbD) family - - - 0.0000000000000001297 81.0
LYD1_k127_4287738_102 PFAM Transglycosylase-associated protein - - - 0.000000000000001657 79.0
LYD1_k127_4287738_103 integral membrane protein - - - 0.00000000000002922 79.0
LYD1_k127_4287738_104 Sortase family - - - 0.0000000000001693 80.0
LYD1_k127_4287738_105 - - - - 0.0000000000004224 78.0
LYD1_k127_4287738_106 toxin-antitoxin pair type II binding - - - 0.0000000000008078 72.0
LYD1_k127_4287738_107 alpha-ribazole phosphatase activity K01834,K15634,K22306 - 3.1.3.85,5.4.2.11,5.4.2.12 0.00000000003641 72.0
LYD1_k127_4287738_109 PFAM Vitamin B12 dependent methionine synthase, activation - - - 0.00000000008491 72.0
LYD1_k127_4287738_11 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 5.809e-199 632.0
LYD1_k127_4287738_111 - - - - 0.00000001198 66.0
LYD1_k127_4287738_112 Phage integrase, N-terminal SAM-like domain - - - 0.0000000276 66.0
LYD1_k127_4287738_113 Septum formation initiator - - - 0.00000008862 59.0
LYD1_k127_4287738_114 Cation transporter/ATPase, N-terminus K01531 - 3.6.3.2 0.0000001568 54.0
LYD1_k127_4287738_115 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944 2.1.1.163,2.1.1.201 0.000000188 61.0
LYD1_k127_4287738_116 Ribosomal-protein-alanine acetyltransferase K03789 GO:0003674,GO:0003824,GO:0004596,GO:0006464,GO:0006473,GO:0006474,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019538,GO:0031365,GO:0034212,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.128 0.000001066 61.0
LYD1_k127_4287738_118 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.000005126 52.0
LYD1_k127_4287738_119 Cytochrome c - - - 0.00001545 58.0
LYD1_k127_4287738_12 Converts the aldose L-fucose into the corresponding ketose L-fuculose - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004359 605.0
LYD1_k127_4287738_120 COGs COG4096 Type I site-specific restriction-modification system R (restriction) subunit and related helicase K01153 - 3.1.21.3 0.0001209 45.0
LYD1_k127_4287738_13 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003367 596.0
LYD1_k127_4287738_14 Acetokinase family K00925 - 2.7.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 564.0
LYD1_k127_4287738_15 Peptidase family M41 K03798 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003945 571.0
LYD1_k127_4287738_16 adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004978 594.0
LYD1_k127_4287738_17 6-phosphogluconate dehydrogenase, C-terminal domain K00033 - 1.1.1.343,1.1.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 565.0
LYD1_k127_4287738_18 Domain of unknown function (DUF4445) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 567.0
LYD1_k127_4287738_19 COG1070 Sugar (pentulose and hexulose) K00848 - 2.7.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002824 556.0
LYD1_k127_4287738_2 Converts the aldose L-fucose into the corresponding ketose L-fuculose K01818 - 5.3.1.25,5.3.1.3 1.006e-300 931.0
LYD1_k127_4287738_20 ABC transporter transmembrane region K06147 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004984 550.0
LYD1_k127_4287738_21 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114 1.2.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002496 535.0
LYD1_k127_4287738_22 Domain of unknown function (DUF4432) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000187 524.0
LYD1_k127_4287738_23 Phosphotransfer between the C1 and C5 carbon atoms of pentose K01839 - 5.4.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001227 514.0
LYD1_k127_4287738_24 ABC transporter transmembrane region K06147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005218 521.0
LYD1_k127_4287738_25 xylulokinase activity K00848,K00851,K00854,K00862 - 2.7.1.12,2.7.1.17,2.7.1.215,2.7.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 514.0
LYD1_k127_4287738_26 Belongs to the cysteine synthase cystathionine beta- synthase family K01697,K01738,K18926 - 2.5.1.47,4.2.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008788 505.0
LYD1_k127_4287738_27 WD40 domain protein beta Propeller K03641 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000425 504.0
LYD1_k127_4287738_28 PFAM peptidase M4 thermolysin K08603 - 3.4.24.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004384 491.0
LYD1_k127_4287738_29 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 482.0
LYD1_k127_4287738_3 tRNA synthetases class I (E and Q), anti-codon binding domain K01886 - 6.1.1.18 6.667e-290 897.0
LYD1_k127_4287738_30 Cytidylyltransferase-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006237 478.0
LYD1_k127_4287738_31 COG0626 Cystathionine beta-lyases cystathionine gamma-synthases K01758 - 4.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002834 472.0
LYD1_k127_4287738_32 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002066 460.0
LYD1_k127_4287738_33 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K00651 - 2.3.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005971 453.0
LYD1_k127_4287738_34 Belongs to the ABC transporter superfamily K10823 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008238 443.0
LYD1_k127_4287738_35 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003686 428.0
LYD1_k127_4287738_36 carbohydrate kinase FGGY K00851 - 2.7.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 427.0
LYD1_k127_4287738_37 PFAM glycoside hydrolase, family 4 K07406 - 3.2.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002822 424.0
LYD1_k127_4287738_38 Belongs to the ABC transporter superfamily K02031,K15583 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002396 415.0
LYD1_k127_4287738_39 Trimethylamine methyltransferase (MTTB) K14083 - 2.1.1.250 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003048 418.0
LYD1_k127_4287738_4 beta-galactosidase activity K01195 - 3.2.1.31 1.838e-284 883.0
LYD1_k127_4287738_40 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004061 412.0
LYD1_k127_4287738_41 PFAM glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001654 386.0
LYD1_k127_4287738_42 PFAM Haloacid dehalogenase domain protein hydrolase K02566 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001893 377.0
LYD1_k127_4287738_43 heme binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004566 381.0
LYD1_k127_4287738_44 lipid kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 346.0
LYD1_k127_4287738_45 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004265 364.0
LYD1_k127_4287738_46 PFAM type II secretion system protein E K02283 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006118 337.0
LYD1_k127_4287738_47 Trimethylamine methyltransferase (MTTB) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003402 329.0
LYD1_k127_4287738_48 Encoded by - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003015 326.0
LYD1_k127_4287738_49 Peptidase family S51 K01256 - 3.4.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006076 298.0
LYD1_k127_4287738_5 Belongs to the glycosyl hydrolase 2 family K01190 - 3.2.1.23 2.035e-281 885.0
LYD1_k127_4287738_50 PFAM Trimethylamine methyltransferase (MTTB) K14083 - 2.1.1.250 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002083 308.0
LYD1_k127_4287738_51 Haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009191 280.0
LYD1_k127_4287738_52 B3/4 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001614 280.0
LYD1_k127_4287738_53 helix_turn_helix, mercury resistance - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002908 277.0
LYD1_k127_4287738_54 Methyltransferase MtaA CmuA family K01599 - 4.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000001109 272.0
LYD1_k127_4287738_55 PFAM restriction modification system DNA specificity domain K01154 - 3.1.21.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000007015 274.0
LYD1_k127_4287738_56 Transposase DDE domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002685 267.0
LYD1_k127_4287738_57 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000451 266.0
LYD1_k127_4287738_58 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002337 259.0
LYD1_k127_4287738_59 Deacylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000001453 244.0
LYD1_k127_4287738_6 Belongs to the peptidase S16 family - - - 2.849e-263 833.0
LYD1_k127_4287738_60 phosphatidate phosphatase activity K19302 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000001881 233.0
LYD1_k127_4287738_61 TIGRFAM methyltransferase cognate corrinoid proteins, Methanosarcina family - - - 0.000000000000000000000000000000000000000000000000000000000000001231 224.0
LYD1_k127_4287738_62 Serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000001143 236.0
LYD1_k127_4287738_63 COG3209 Rhs family protein - - - 0.00000000000000000000000000000000000000000000000000000000001298 229.0
LYD1_k127_4287738_64 SMART PAS domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000002173 226.0
LYD1_k127_4287738_65 PFAM Vitamin K epoxide reductase - - - 0.000000000000000000000000000000000000000000000000000000002479 212.0
LYD1_k127_4287738_66 ROK family K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000000000949 209.0
LYD1_k127_4287738_67 Member of the two-component regulatory system kdpD kdpE involved in the regulation of the kdp operon K02483,K07667 - - 0.00000000000000000000000000000000000000000000000000002187 195.0
LYD1_k127_4287738_68 Domain of Unknown Function (DUF1206) - - - 0.00000000000000000000000000000000000000000000000000008515 197.0
LYD1_k127_4287738_69 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000818 188.0
LYD1_k127_4287738_7 Amino acid permease - - - 9.201e-263 823.0
LYD1_k127_4287738_70 PIN domain - - - 0.00000000000000000000000000000000000000000000007453 172.0
LYD1_k127_4287738_71 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000919 174.0
LYD1_k127_4287738_72 ABC transporter substrate-binding protein K02035 - - 0.000000000000000000000000000000000000000000217 172.0
LYD1_k127_4287738_73 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000000000000000000003296 162.0
LYD1_k127_4287738_74 PFAM phospholipid glycerol acyltransferase - - - 0.000000000000000000000000000000000000000003328 167.0
LYD1_k127_4287738_75 pyridoxamine 5-phosphate - - - 0.000000000000000000000000000000000000000003453 160.0
LYD1_k127_4287738_76 Protein of unknown function (DUF1697) - - - 0.000000000000000000000000000000000000000005495 160.0
LYD1_k127_4287738_77 PFAM diacylglycerol kinase catalytic region - - - 0.0000000000000000000000000000000000000003019 163.0
LYD1_k127_4287738_79 Protein of unknown function (DUF3494) - - - 0.00000000000000000000000000000000000004752 156.0
LYD1_k127_4287738_8 PFAM Cys Met metabolism pyridoxal-phosphate-dependent protein K01740 - 2.5.1.49 2.217e-227 711.0
LYD1_k127_4287738_80 Belongs to the Dps family K04047 - - 0.0000000000000000000000000000000000001174 148.0
LYD1_k127_4287738_81 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000001765 153.0
LYD1_k127_4287738_82 rRNA small subunit methyltransferase G - - - 0.000000000000000000000000000000000004181 154.0
LYD1_k127_4287738_83 DNA-binding ferritin-like protein (Oxidative damage protectant) K04047 - - 0.0000000000000000000000000000000003951 138.0
LYD1_k127_4287738_84 COG3209 Rhs family protein - - - 0.000000000000000000000000000000001432 144.0
LYD1_k127_4287738_85 Extracellular solute-binding protein K02035 - - 0.0000000000000000000000000000001427 132.0
LYD1_k127_4287738_86 Diacylglycerol kinase catalytic domain (presumed) - - - 0.000000000000000000000000000005395 131.0
LYD1_k127_4287738_87 PIN domain - - - 0.00000000000000000000000000004807 120.0
LYD1_k127_4287738_88 PIN domain - - - 0.0000000000000000000000000001216 124.0
LYD1_k127_4287738_89 - - - - 0.0000000000000000000000000002213 124.0
LYD1_k127_4287738_9 HsdM N-terminal domain K03427 - 2.1.1.72 4.361e-220 691.0
LYD1_k127_4287738_90 Transmembrane secretion effector - - - 0.0000000000000000000000000007175 128.0
LYD1_k127_4287738_91 Acid phosphatase homologues - - - 0.0000000000000000000000000009212 122.0
LYD1_k127_4287738_92 Transposase - - - 0.000000000000000000000000001648 119.0
LYD1_k127_4287738_93 - - - - 0.00000000000000000000009165 103.0
LYD1_k127_4287738_94 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000003571 109.0
LYD1_k127_4287738_95 - - - - 0.000000000000000000002526 96.0
LYD1_k127_4287738_96 Nucleotide binding protein, PINc - - - 0.000000000000000000003545 98.0
LYD1_k127_4287738_97 SMART alpha amylase catalytic sub domain K05343 - 3.2.1.1,5.4.99.16 0.000000000000000000004381 100.0
LYD1_k127_4287738_98 toxin-antitoxin pair type II binding - - - 0.00000000000000000001282 93.0
LYD1_k127_4287738_99 PFAM phosphoesterase PA-phosphatase related K19302 - 3.6.1.27 0.00000000000000000005451 99.0
LYD1_k127_4371774_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 2121.0
LYD1_k127_4371774_1 Tetratricopeptide TPR_2 repeat protein - - - 0.0 1477.0
LYD1_k127_4371774_10 PFAM cell divisionFtsK SpoIIIE K03466 - - 2.339e-213 687.0
LYD1_k127_4371774_100 - - - - 0.0000002005 59.0
LYD1_k127_4371774_101 serine-type aminopeptidase activity K14475 - - 0.00002982 53.0
LYD1_k127_4371774_102 Insecticide toxin TcdB middle/N-terminal region - - - 0.00009228 53.0
LYD1_k127_4371774_11 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 3.83e-209 657.0
LYD1_k127_4371774_12 Lytic transglycosylase catalytic K08309 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001713 614.0
LYD1_k127_4371774_13 PFAM extracellular solute-binding protein, family 5 K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 598.0
LYD1_k127_4371774_14 PFAM metal-dependent phosphohydrolase, HD sub domain K01129 - 3.1.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003391 585.0
LYD1_k127_4371774_15 PFAM Glycosyl transferase family 2 K07011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 606.0
LYD1_k127_4371774_16 oligosaccharyl transferase activity K07151 - 2.4.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002629 572.0
LYD1_k127_4371774_17 Proline racemase K01777 GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016854,GO:0016855,GO:0018112,GO:0019752,GO:0036361,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0047661,GO:0050346,GO:0071704,GO:1901564 5.1.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002318 517.0
LYD1_k127_4371774_18 SPTR Type II restriction modification system, methylation subunit K00571,K00590 - 2.1.1.113,2.1.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001918 482.0
LYD1_k127_4371774_19 TIGRFAM DNA protecting protein DprA K04096 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003587 452.0
LYD1_k127_4371774_2 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0 1099.0
LYD1_k127_4371774_20 ADP-ribosylglycohydrolase K05521 - 3.2.2.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008046 447.0
LYD1_k127_4371774_21 PFAM glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006903 434.0
LYD1_k127_4371774_22 PFAM PfkB domain protein K00856 - 2.7.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007759 428.0
LYD1_k127_4371774_23 SMART phosphoesterase PHP domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003317 427.0
LYD1_k127_4371774_24 Stage II sporulation protein M - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002346 420.0
LYD1_k127_4371774_25 AAA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003816 430.0
LYD1_k127_4371774_26 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004016 406.0
LYD1_k127_4371774_27 Wzt C-terminal domain K09691 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002008 417.0
LYD1_k127_4371774_28 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002242 403.0
LYD1_k127_4371774_29 PFAM glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008189 369.0
LYD1_k127_4371774_3 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1035.0
LYD1_k127_4371774_30 Nucleotidyl transferase K00971 - 2.7.7.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002608 365.0
LYD1_k127_4371774_31 histidine kinase A domain protein K02484,K07642 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000485 369.0
LYD1_k127_4371774_32 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000019 354.0
LYD1_k127_4371774_33 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003483 349.0
LYD1_k127_4371774_34 PFAM ABC transporter related K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 337.0
LYD1_k127_4371774_35 PFAM UbiA prenyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006425 333.0
LYD1_k127_4371774_36 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit K00479 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002436 337.0
LYD1_k127_4371774_37 PFAM Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002238 327.0
LYD1_k127_4371774_38 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003046 319.0
LYD1_k127_4371774_39 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 - 4.1.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002839 306.0
LYD1_k127_4371774_4 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 1.468e-310 959.0
LYD1_k127_4371774_40 Two component transcriptional regulator, winged helix family K02483 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000182 301.0
LYD1_k127_4371774_41 TIGRFAM mevalonate kinase K00869 - 2.7.1.36 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007091 282.0
LYD1_k127_4371774_42 ABC-2 type transporter K09690 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009854 274.0
LYD1_k127_4371774_43 Ribosomal RNA methyltransferase RrmJ FtsJ K06442 - 2.1.1.226,2.1.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001704 273.0
LYD1_k127_4371774_44 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002911 277.0
LYD1_k127_4371774_45 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001147 271.0
LYD1_k127_4371774_46 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002614 275.0
LYD1_k127_4371774_47 PFAM DegV family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009022 271.0
LYD1_k127_4371774_48 Redoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002253 255.0
LYD1_k127_4371774_49 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002689 283.0
LYD1_k127_4371774_5 protein histidine kinase activity K02484,K07636,K07642 GO:0000155,GO:0000160,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0004721,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0016020,GO:0016021,GO:0016036,GO:0016301,GO:0016310,GO:0016311,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0016787,GO:0016788,GO:0016791,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0031224,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0035556,GO:0036211,GO:0042578,GO:0042594,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044464,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071496,GO:0071704,GO:0071944,GO:0140096,GO:1901564 2.7.13.3 1.283e-277 889.0
LYD1_k127_4371774_50 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.00000000000000000000000000000000000000000000000000000000000000000000000003512 256.0
LYD1_k127_4371774_51 Belongs to the IUNH family K01239 - 3.2.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000001437 258.0
LYD1_k127_4371774_52 PFAM aspartate glutamate uridylate kinase K06981 - 2.7.4.26 0.00000000000000000000000000000000000000000000000000000000000000000000000052 255.0
LYD1_k127_4371774_53 HNH endonuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009975 249.0
LYD1_k127_4371774_54 nucleotidyltransferase activity K17882 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004282 252.0
LYD1_k127_4371774_55 extracellular matrix structural constituent - - - 0.000000000000000000000000000000000000000000000000000000000000000000001779 265.0
LYD1_k127_4371774_56 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.000000000000000000000000000000000000000000000000000000000000000000002929 241.0
LYD1_k127_4371774_57 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000002483 242.0
LYD1_k127_4371774_59 peptidoglycan turnover - - - 0.0000000000000000000000000000000000000000000000000000000000000008538 233.0
LYD1_k127_4371774_6 Belongs to the RtcB family K14415 - 6.5.1.3 3.65e-237 740.0
LYD1_k127_4371774_60 Erythromycin esterase K06880 - - 0.00000000000000000000000000000000000000000000000000000000000000919 233.0
LYD1_k127_4371774_61 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins - - - 0.0000000000000000000000000000000000000000000000000000000000004475 216.0
LYD1_k127_4371774_62 Nickel-containing superoxide dismutase K00518 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000000112 210.0
LYD1_k127_4371774_63 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.00000000000000000000000000000000000000000000000000005501 189.0
LYD1_k127_4371774_64 Aminoacyl-tRNA editing domain K03976 - - 0.000000000000000000000000000000000000000000000000004359 185.0
LYD1_k127_4371774_65 membrane - - - 0.00000000000000000000000000000000000000000000000007312 188.0
LYD1_k127_4371774_66 amidohydrolase K07045 - - 0.0000000000000000000000000000000000000000000000001032 194.0
LYD1_k127_4371774_67 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.000000000000000000000000000000000000000000000000168 181.0
LYD1_k127_4371774_68 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.0000000000000000000000000000000000000000000000002418 181.0
LYD1_k127_4371774_69 PFAM phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000001437 183.0
LYD1_k127_4371774_7 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 6.32e-229 713.0
LYD1_k127_4371774_70 PFAM Exonuclease, RNase T and DNA polymerase III K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000008521 179.0
LYD1_k127_4371774_71 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000001966 140.0
LYD1_k127_4371774_72 lysyltransferase activity K07027 - - 0.00000000000000000000000000000000001678 149.0
LYD1_k127_4371774_73 Archease protein family (MTH1598/TM1083) - - - 0.0000000000000000000000000000000007155 134.0
LYD1_k127_4371774_74 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000001072 142.0
LYD1_k127_4371774_75 PFAM Forkhead-associated protein - - - 0.0000000000000000000000000000003465 127.0
LYD1_k127_4371774_76 Cupin domain - - - 0.000000000000000000000000000003885 122.0
LYD1_k127_4371774_77 Phosphate acyltransferases K00655 - 2.3.1.51 0.000000000000000000000000000009436 128.0
LYD1_k127_4371774_78 protein tyrosine phosphatase activity K01104,K03651 - 3.1.3.48,3.1.4.53 0.0000000000000000000000000000202 130.0
LYD1_k127_4371774_79 PFAM Sulfate transporter antisigma-factor antagonist STAS K04749,K04757 - 2.7.11.1 0.0000000000000000000000000006039 117.0
LYD1_k127_4371774_8 Uncharacterized membrane protein (DUF2298) - - - 5.845e-222 718.0
LYD1_k127_4371774_80 COG3209 Rhs family protein - - - 0.00000000000000000000000000177 121.0
LYD1_k127_4371774_81 Belongs to the 'phage' integrase family - - - 0.00000000000000000000000005383 121.0
LYD1_k127_4371774_82 PFAM Sulfate transporter antisigma-factor antagonist STAS K04749 - - 0.0000000000000000000000004004 108.0
LYD1_k127_4371774_83 Phosphate acyltransferases K00655 - 2.3.1.51 0.0000000000000000000000004023 113.0
LYD1_k127_4371774_84 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.000000000000000000000006453 119.0
LYD1_k127_4371774_85 Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules K04763 - - 0.00000000000000000000003414 115.0
LYD1_k127_4371774_86 P-P-bond-hydrolysis-driven protein transmembrane transporter activity K03075 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0022857,GO:0022884,GO:0031522,GO:0032978,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0042887,GO:0043952,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.00000000000000000001603 93.0
LYD1_k127_4371774_88 PFAM Forkhead-associated protein - - - 0.0000000000000000000688 99.0
LYD1_k127_4371774_89 signal peptide processing K13280 - 3.4.21.89 0.0000000000000000004316 90.0
LYD1_k127_4371774_9 Belongs to the SEDS family - - - 1.152e-219 711.0
LYD1_k127_4371774_90 Belongs to the UPF0109 family K06960 - - 0.000000000000000004606 86.0
LYD1_k127_4371774_91 Redoxin - - - 0.00000000000000547 75.0
LYD1_k127_4371774_92 Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides. Binds and recognizes a DNA motif (called the malT box) 5'-GGA TG GA-3' K03556 - - 0.0000000000003473 83.0
LYD1_k127_4371774_93 PspC domain - - - 0.0000000000005512 72.0
LYD1_k127_4371774_94 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.00000000005566 71.0
LYD1_k127_4371774_95 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000002116 74.0
LYD1_k127_4371774_96 ubiE/COQ5 methyltransferase family - - - 0.000000001234 68.0
LYD1_k127_4371774_97 nucleotide pyrophosphatase - - - 0.00000001104 68.0
LYD1_k127_4371774_98 Arsenical pump membrane protein - - - 0.0000000255 57.0
LYD1_k127_4371774_99 Involved in the TonB-independent uptake of proteins K03641 - - 0.00000003062 66.0
LYD1_k127_4401619_0 PFAM glycoside hydrolase, clan GH-D K07407 - 3.2.1.22 2.277e-250 793.0
LYD1_k127_4401619_1 PFAM Mandelate racemase muconate lactonizing - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002001 507.0
LYD1_k127_4401619_10 converts alpha-aldose to the beta-anomer - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001702 267.0
LYD1_k127_4401619_11 Trimethylamine methyltransferase K14083 - 2.1.1.250 0.000000000000000000000000000000000004516 143.0
LYD1_k127_4401619_12 Trimethylamine methyltransferase (MTTB) K14083 - 2.1.1.250 0.000000000000001977 89.0
LYD1_k127_4401619_2 PFAM binding-protein-dependent transport systems inner membrane component K02025,K05814,K10118,K10237,K10241,K15771,K17235,K17316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000181 359.0
LYD1_k127_4401619_3 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004518 346.0
LYD1_k127_4401619_4 helix_turn_helix gluconate operon transcriptional repressor K07978 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001521 342.0
LYD1_k127_4401619_5 Bacterial extracellular solute-binding protein K02027 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 348.0
LYD1_k127_4401619_6 glycerophosphodiester transmembrane transport K02026,K05815 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005342 330.0
LYD1_k127_4401619_7 KR domain K21883 - 1.1.1.401 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007709 307.0
LYD1_k127_4401619_8 Glycogen debranching enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009011 337.0
LYD1_k127_4401619_9 PFAM SMP-30 Gluconolaconase LRE domain protein K01053 - 3.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002499 288.0
LYD1_k127_4454715_0 PFAM Cytochrome c oxidase, subunit I K04561 - 1.7.2.5 0.0 1129.0
LYD1_k127_4454715_1 intracellular signal transduction - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003194 573.0
LYD1_k127_4454715_10 - - - - 0.0000000000000000000000000000000000000001248 160.0
LYD1_k127_4454715_12 Peptidase family M50 K06212,K06402 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000188 139.0
LYD1_k127_4454715_13 OmpA family - - - 0.000000000000000000000000000003164 136.0
LYD1_k127_4454715_14 3-demethylubiquinone-9 3-O-methyltransferase activity K03428 - 2.1.1.11 0.000000000000000000000000000004438 127.0
LYD1_k127_4454715_15 Surface antigen - - - 0.00000000000000000000000000001124 124.0
LYD1_k127_4454715_16 methyltransferase activity - - - 0.000000000000000000000000005622 120.0
LYD1_k127_4454715_17 Pfam Plasmid maintenance system killer K07334 - - 0.0000000000000000007296 87.0
LYD1_k127_4454715_18 Ig-like domain from next to BRCA1 gene - - - 0.0000000000000005978 89.0
LYD1_k127_4454715_19 PFAM N-6 DNA methylase K03427 - 2.1.1.72 0.00000000000000116 79.0
LYD1_k127_4454715_2 Pfam:DUF955 K18831 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003716 365.0
LYD1_k127_4454715_20 membrane protein (DUF2078) K08982 - - 0.00000000000003023 75.0
LYD1_k127_4454715_21 HsdM N-terminal domain K03427 - 2.1.1.72 0.000000002803 59.0
LYD1_k127_4454715_22 membrane protein (DUF2078) K08982 - - 0.00000001305 58.0
LYD1_k127_4454715_23 DinB superfamily - - - 0.0000002755 59.0
LYD1_k127_4454715_24 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.00000223 53.0
LYD1_k127_4454715_25 - - - - 0.0000214 53.0
LYD1_k127_4454715_3 RibD C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007471 310.0
LYD1_k127_4454715_4 hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000002948 226.0
LYD1_k127_4454715_5 RibD C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000001926 210.0
LYD1_k127_4454715_6 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000002923 191.0
LYD1_k127_4454715_7 site-specific DNA-methyltransferase (adenine-specific) activity K03427 - 2.1.1.72 0.0000000000000000000000000000000000000000000000002891 180.0
LYD1_k127_4454715_8 Cytochrome c - - - 0.000000000000000000000000000000000000000000007291 179.0
LYD1_k127_4454715_9 - - - - 0.00000000000000000000000000000000000000000001783 167.0
LYD1_k127_4579724_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 3.204e-307 949.0
LYD1_k127_4579724_1 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 6.42e-290 910.0
LYD1_k127_4579724_10 Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively K06215 - 4.3.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002194 527.0
LYD1_k127_4579724_11 Peptidase M16 domain protein K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001814 530.0
LYD1_k127_4579724_12 Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB) K02549 - 4.2.1.113 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001799 490.0
LYD1_k127_4579724_13 peptidase M42 family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 485.0
LYD1_k127_4579724_14 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002828 477.0
LYD1_k127_4579724_15 Catalyzes the transfer of the amino group of L-glutamate to LysW -aminoadipate 6-semialdehyde, generating LysW -gamma-L- lysine K05830 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 474.0
LYD1_k127_4579724_16 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00528 - 1.18.1.2,1.19.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001748 476.0
LYD1_k127_4579724_17 Peptidoglycan-binding LysM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007602 473.0
LYD1_k127_4579724_18 peptidase M42 family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001451 463.0
LYD1_k127_4579724_19 Insulinase (Peptidase family M16) K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007289 457.0
LYD1_k127_4579724_2 PFAM peptidase M3A and M3B, thimet oligopeptidase F K08602 - - 1.435e-254 796.0
LYD1_k127_4579724_20 Belongs to the RimK family K05827 - 6.3.2.43 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008763 442.0
LYD1_k127_4579724_21 PFAM ATPase associated with various cellular activities, AAA_3 K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004125 433.0
LYD1_k127_4579724_22 PFAM band 7 protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004874 430.0
LYD1_k127_4579724_23 PFAM isocitrate isopropylmalate dehydrogenase K05824 - 1.1.1.87 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001357 421.0
LYD1_k127_4579724_24 HhH-GPD family K03575 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002339 411.0
LYD1_k127_4579724_25 histidine kinase, dimerisation and phosphoacceptor region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001961 400.0
LYD1_k127_4579724_26 peptidase M42 family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002355 390.0
LYD1_k127_4579724_27 Catalyzes the release of L-lysine from LysW -gamma-L- lysine K05831 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002458 371.0
LYD1_k127_4579724_28 Protein of unknown function DUF58 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006953 349.0
LYD1_k127_4579724_29 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 344.0
LYD1_k127_4579724_3 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 3.443e-237 742.0
LYD1_k127_4579724_30 Belongs to the acetylglutamate kinase family. LysZ subfamily K05828 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006514 330.0
LYD1_k127_4579724_31 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001628 315.0
LYD1_k127_4579724_32 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007135 306.0
LYD1_k127_4579724_33 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 336.0
LYD1_k127_4579724_34 Deoxynucleoside kinase K15518 - 2.7.1.113 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009553 297.0
LYD1_k127_4579724_35 aminoglycoside 3-N-acetyltransferase activity K00662 - 2.3.1.81 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000192 299.0
LYD1_k127_4579724_36 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006472 297.0
LYD1_k127_4579724_37 PFAM ROK family protein K00845 - 2.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003766 290.0
LYD1_k127_4579724_38 Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS K08681 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0032991,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046184,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617,GO:1902494,GO:1903600 4.3.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007136 281.0
LYD1_k127_4579724_39 type I phosphodiesterase nucleotide pyrophosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003177 283.0
LYD1_k127_4579724_4 PFAM single-stranded nucleic acid binding R3H domain protein - - - 1.157e-224 707.0
LYD1_k127_4579724_40 Isochorismatase family K09020 - 3.5.1.110 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009751 271.0
LYD1_k127_4579724_41 heme binding K21472 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003034 260.0
LYD1_k127_4579724_42 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.000000000000000000000000000000000000000000000000000000000000000000000005104 249.0
LYD1_k127_4579724_43 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000004216 250.0
LYD1_k127_4579724_44 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704,K16793 - 4.2.1.114,4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000005044 240.0
LYD1_k127_4579724_45 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000006522 231.0
LYD1_k127_4579724_46 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000001083 229.0
LYD1_k127_4579724_47 COGs COG1653 ABC-type sugar transport system periplasmic component K02027 - - 0.0000000000000000000000000000000000000000000000000000000000007966 229.0
LYD1_k127_4579724_49 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000207 207.0
LYD1_k127_4579724_5 PFAM glycoside hydrolase family 29 (alpha-L-fucosidase) K01206 - 3.2.1.51 4.233e-219 686.0
LYD1_k127_4579724_50 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.0000000000000000000000000000000000000000000000000000000003934 206.0
LYD1_k127_4579724_51 Transglycosylase SLT domain - - - 0.0000000000000000000000000000000000000000000000000000001269 201.0
LYD1_k127_4579724_52 PhoQ Sensor - - - 0.00000000000000000000000000000000000000000000000000002997 204.0
LYD1_k127_4579724_53 Protein of unknown function (DUF541) K09807 - - 0.0000000000000000000000000000000000000000000000000006954 192.0
LYD1_k127_4579724_54 metal-binding, possibly nucleic acid-binding protein K07040 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0040007,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000009765 186.0
LYD1_k127_4579724_56 - - - - 0.0000000000000000000000000000000000000000000000009861 182.0
LYD1_k127_4579724_57 PFAM LmbE family protein - - - 0.00000000000000000000000000000000000000000000001252 179.0
LYD1_k127_4579724_58 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000002081 180.0
LYD1_k127_4579724_59 PFAM Nitroreductase - - - 0.0000000000000000000000000000000000000000000003909 172.0
LYD1_k127_4579724_6 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649,K02594 - 2.3.3.13,2.3.3.14 7.391e-213 669.0
LYD1_k127_4579724_60 - - - - 0.0000000000000000000000000000000000000000000005018 175.0
LYD1_k127_4579724_61 Putative regulatory protein - - - 0.0000000000000000000000000000000000000000000005419 169.0
LYD1_k127_4579724_63 KR domain - - - 0.0000000000000000000000000000000000000000009744 166.0
LYD1_k127_4579724_64 Domain of unknown function (DU1801) - - - 0.00000000000000000000000000000000000000009196 153.0
LYD1_k127_4579724_65 PFAM regulatory protein GntR HTH K07979 - - 0.0000000000000000000000000000000000009432 144.0
LYD1_k127_4579724_66 - - - - 0.000000000000000000000000000000000002118 139.0
LYD1_k127_4579724_67 PFAM Transposase IS200 like - - - 0.00000000000000000000000000000000008132 143.0
LYD1_k127_4579724_68 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.00000000000000000000000000000001452 131.0
LYD1_k127_4579724_7 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703,K16792 - 4.2.1.114,4.2.1.33,4.2.1.35 3.247e-205 645.0
LYD1_k127_4579724_70 Single-strand binding protein family K03111 - - 0.00000000000000000000000000005714 120.0
LYD1_k127_4579724_72 Domain of unknown function (DUF4129) - - - 0.00000000000000001325 93.0
LYD1_k127_4579724_73 - - - - 0.00000000001293 71.0
LYD1_k127_4579724_74 Ethyl tert-butyl ether degradation - - - 0.0000002489 58.0
LYD1_k127_4579724_76 Bacterial extracellular solute-binding protein - - - 0.00003964 56.0
LYD1_k127_4579724_77 - - - - 0.00004851 46.0
LYD1_k127_4579724_78 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006950,GO:0007154,GO:0008150,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0016020,GO:0030312,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0042221,GO:0042594,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0050896,GO:0051716,GO:0071496,GO:0071944 - 0.00009787 45.0
LYD1_k127_4579724_8 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000648 561.0
LYD1_k127_4579724_9 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003162 544.0
LYD1_k127_4580832_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate - - - 0.0 1263.0
LYD1_k127_4580832_1 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K00850 - 2.7.1.11 1.466e-317 989.0
LYD1_k127_4580832_10 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008474 512.0
LYD1_k127_4580832_11 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 518.0
LYD1_k127_4580832_12 Polynucleotide adenylyltransferase region K00974 - 2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002963 481.0
LYD1_k127_4580832_13 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001837 466.0
LYD1_k127_4580832_14 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003375 433.0
LYD1_k127_4580832_15 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005697 392.0
LYD1_k127_4580832_16 drug transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003426 370.0
LYD1_k127_4580832_17 PFAM LmbE family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006796 349.0
LYD1_k127_4580832_18 ErfK ybiS ycfS ynhG family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009503 356.0
LYD1_k127_4580832_19 PFAM phosphoesterase, RecJ domain protein K06881 - 3.1.13.3,3.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005027 344.0
LYD1_k127_4580832_2 peptidase S9B dipeptidylpeptidase IV domain protein K01278 - 3.4.14.5 2.229e-279 876.0
LYD1_k127_4580832_20 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate K00761 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005709 329.0
LYD1_k127_4580832_21 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 336.0
LYD1_k127_4580832_22 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway K00852 - 2.7.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 327.0
LYD1_k127_4580832_23 PFAM peptidase M48 Ste24p K06013 - 3.4.24.84 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004237 318.0
LYD1_k127_4580832_24 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 306.0
LYD1_k127_4580832_25 ErfK ybiS ycfS ynhG family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001552 300.0
LYD1_k127_4580832_26 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004223 294.0
LYD1_k127_4580832_27 Phosphotriesterase family K07048 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002918 292.0
LYD1_k127_4580832_28 dolichyl monophosphate biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001046 283.0
LYD1_k127_4580832_29 BadF/BadG/BcrA/BcrD ATPase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002388 285.0
LYD1_k127_4580832_3 TIGRFAM acetyl coenzyme A synthetase (ADP forming), alpha domain K01905,K22224 - 6.2.1.13 5.054e-244 772.0
LYD1_k127_4580832_30 COG0477 Permeases of the major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001262 283.0
LYD1_k127_4580832_31 PFAM DRTGG domain protein K06873 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002804 277.0
LYD1_k127_4580832_32 Serine threonine protein kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008475 281.0
LYD1_k127_4580832_34 stress-induced mitochondrial fusion K04066,K07037,K17266 - - 0.00000000000000000000000000000000000000000000000000000000000000000006056 252.0
LYD1_k127_4580832_35 PFAM Na-Ca exchanger integrin-beta4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000004047 261.0
LYD1_k127_4580832_36 GIY-YIG type nucleases (URI domain) K03703 - - 0.000000000000000000000000000000000000000000000000000000000000000001426 241.0
LYD1_k127_4580832_37 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.00000000000000000000000000000000000000000000000000000000000000003131 233.0
LYD1_k127_4580832_39 - - - - 0.00000000000000000000000000000000000000000000000000000000000001804 232.0
LYD1_k127_4580832_4 Participates in both transcription termination and antitermination K02600 - - 3.175e-229 728.0
LYD1_k127_4580832_40 PFAM Methyltransferase type 11 - - - 0.0000000000000000000000000000000000000000000000000000000000001374 222.0
LYD1_k127_4580832_41 PFAM O-methyltransferase, family 3 - - - 0.00000000000000000000000000000000000000000000000000000000001245 219.0
LYD1_k127_4580832_42 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000001922 214.0
LYD1_k127_4580832_43 acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000002377 204.0
LYD1_k127_4580832_44 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.00000000000000000000000000000000000000000000000000000000938 203.0
LYD1_k127_4580832_45 adenosylhomocysteine nucleosidase activity K01239,K01243,K03716 - 3.2.2.1,3.2.2.9,4.1.99.14 0.00000000000000000000000000000000000000000000000000000003804 203.0
LYD1_k127_4580832_46 Phosphoglycerate mutase family K01834 - 5.4.2.11 0.0000000000000000000000000000000000000000000000000001485 192.0
LYD1_k127_4580832_47 Stage II sporulation K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000000001292 204.0
LYD1_k127_4580832_48 OsmC-like protein K07397 - - 0.000000000000000000000000000000000000000000000000398 178.0
LYD1_k127_4580832_49 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000001036 173.0
LYD1_k127_4580832_5 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 6.385e-210 659.0
LYD1_k127_4580832_50 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.0000000000000000000000000000000000000000001215 162.0
LYD1_k127_4580832_51 PHP domain protein K07053 - 3.1.3.97 0.000000000000000000000000000000000000000002487 163.0
LYD1_k127_4580832_52 PFAM periplasmic copper-binding - - - 0.000000000000000000000000000000000000000005096 179.0
LYD1_k127_4580832_53 Phosphoglycerate mutase family K01834 - 5.4.2.11 0.00000000000000000000000000000000000004534 150.0
LYD1_k127_4580832_54 NUDIX domain - - - 0.000000000000000000000000000000000008467 143.0
LYD1_k127_4580832_56 Protein of unknown function (DUF448) K07742 - - 0.000000000000000000000000000007594 121.0
LYD1_k127_4580832_57 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.00000000000000000000504 98.0
LYD1_k127_4580832_58 Metal-sensitive transcriptional repressor K21600 - - 0.0000000000000000001405 91.0
LYD1_k127_4580832_59 AMP binding - - - 0.000000000000000001088 97.0
LYD1_k127_4580832_6 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 4.409e-197 631.0
LYD1_k127_4580832_60 Peptidase family M28 K05994 - 3.4.11.10 0.0000000000001088 83.0
LYD1_k127_4580832_61 PspC domain K03973 - - 0.000000000001962 70.0
LYD1_k127_4580832_62 Protein of unknown function (DUF2905) - - - 0.000000000003529 68.0
LYD1_k127_4580832_63 - - - - 0.000000000003836 68.0
LYD1_k127_4580832_64 Putative regulatory protein - - - 0.00000000003364 69.0
LYD1_k127_4580832_65 - - - - 0.000003286 52.0
LYD1_k127_4580832_66 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.0001221 50.0
LYD1_k127_4580832_67 - - - - 0.0001629 52.0
LYD1_k127_4580832_7 PFAM glycosyl transferase family 3 K00756 - 2.4.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001564 594.0
LYD1_k127_4580832_8 Domain of unknown function (DUF362) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003934 565.0
LYD1_k127_4580832_9 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006026 528.0
LYD1_k127_4718740_0 secondary active sulfate transmembrane transporter activity K03321 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001634 596.0
LYD1_k127_4718740_1 PFAM Adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008018 434.0
LYD1_k127_4718740_2 amino acid transport K02030 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008038 398.0
LYD1_k127_4718740_3 PFAM DNA polymerase, beta domain protein region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009754 381.0
LYD1_k127_4718740_4 stress-induced mitochondrial fusion - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002697 349.0
LYD1_k127_4718740_5 Binding-protein-dependent transport system inner membrane component K02029 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 316.0
LYD1_k127_4718740_6 ABC transporter, ATP-binding protein K10010 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002185 293.0
LYD1_k127_4785270_0 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008123 354.0
LYD1_k127_4785270_2 Phosphoglycerate mutase family K01834 - 5.4.2.11 0.000000000000000000000000000000000000000000000000001049 190.0
LYD1_k127_4785270_3 uridine kinase K00876 - 2.7.1.48 0.0000000000000000000000000000000000000000001858 163.0
LYD1_k127_484550_0 Belongs to the glycosyl hydrolase 13 family - - - 0.0 1402.0
LYD1_k127_484550_1 ATPase associated with various cellular activities, AAA_5 K03696 - - 0.0 1341.0
LYD1_k127_484550_10 alcohol dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002138 350.0
LYD1_k127_484550_11 Belongs to the MEMO1 family K06990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005382 325.0
LYD1_k127_484550_12 Glucose-6-phosphate isomerase (GPI) K06859 - 5.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000108 267.0
LYD1_k127_484550_13 Phosphoribosyl transferase domain K07101 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003873 258.0
LYD1_k127_484550_14 Belongs to the LOG family K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000007371 221.0
LYD1_k127_484550_15 zinc ion binding K07048 - - 0.00000000000000000000000000000000000000000000000000000000000008023 224.0
LYD1_k127_484550_16 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000004189 196.0
LYD1_k127_484550_17 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000000000000000000001969 160.0
LYD1_k127_484550_18 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.0000000000000000000000000000000000000005272 153.0
LYD1_k127_484550_19 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000000001262 147.0
LYD1_k127_484550_2 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 2.091e-213 682.0
LYD1_k127_484550_20 cyclic nucleotide binding K10914 - - 0.000000000000000000000000000000000006242 141.0
LYD1_k127_484550_21 PFAM membrane protein of K08972 - - 0.000000000000000000000000000289 118.0
LYD1_k127_484550_22 PFAM zinc finger, SWIM domain protein - - - 0.000000000000000000000000007682 112.0
LYD1_k127_484550_23 iron-sulfur cluster assembly - - - 0.00000000000000000000000008257 110.0
LYD1_k127_484550_25 Rdx family K07401 - - 0.0000000000000009667 78.0
LYD1_k127_484550_3 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 3.363e-200 653.0
LYD1_k127_484550_4 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000331 562.0
LYD1_k127_484550_5 xylulokinase activity K00848,K00851,K00854,K00862 - 2.7.1.12,2.7.1.17,2.7.1.215,2.7.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004477 526.0
LYD1_k127_484550_6 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 502.0
LYD1_k127_484550_7 Transporter associated domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001988 487.0
LYD1_k127_484550_8 D-mannonate dehydratase (UxuA) K01686 - 4.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006929 443.0
LYD1_k127_484550_9 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009988 402.0
LYD1_k127_4848299_0 Required for chromosome condensation and partitioning K03529 - - 0.0 1035.0
LYD1_k127_4848299_1 TIGRFAM FeS assembly protein SufB K07033,K09014 - - 2.273e-269 833.0
LYD1_k127_4848299_10 PFAM ATP-binding region, ATPase domain protein K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003295 486.0
LYD1_k127_4848299_11 TIGRFAM phosphate ABC transporter, inner membrane subunit PstA K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 462.0
LYD1_k127_4848299_12 Iron-containing alcohol dehydrogenase K00001,K01714,K13954 - 1.1.1.1,4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007261 448.0
LYD1_k127_4848299_13 PFAM ABC transporter related K09013 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001373 426.0
LYD1_k127_4848299_14 TIGRFAM phosphate ABC transporter, inner membrane subunit PstA K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009632 421.0
LYD1_k127_4848299_15 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 411.0
LYD1_k127_4848299_16 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001802 402.0
LYD1_k127_4848299_17 TIGRFAM phosphate binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001861 406.0
LYD1_k127_4848299_18 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 388.0
LYD1_k127_4848299_19 TIGRFAM phosphate binding protein K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003252 388.0
LYD1_k127_4848299_2 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 8.069e-265 833.0
LYD1_k127_4848299_20 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001914 387.0
LYD1_k127_4848299_21 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 GO:0003674,GO:0003824,GO:0005215,GO:0006810,GO:0006811,GO:0006817,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015114,GO:0015318,GO:0015399,GO:0015405,GO:0015415,GO:0015698,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0034220,GO:0035435,GO:0042623,GO:0042626,GO:0043225,GO:0043492,GO:0051179,GO:0051234,GO:0055085,GO:0098656,GO:0098660,GO:0098661,GO:0099133 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008313 372.0
LYD1_k127_4848299_22 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006159 343.0
LYD1_k127_4848299_23 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008729 352.0
LYD1_k127_4848299_24 Two component transcriptional regulator, winged helix family K02483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004634 316.0
LYD1_k127_4848299_25 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0015980,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0045333,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.141 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008223 319.0
LYD1_k127_4848299_26 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002683 300.0
LYD1_k127_4848299_27 Metallo-beta-lactamase superfamily K17837 - 3.5.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002118 284.0
LYD1_k127_4848299_28 radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002429 284.0
LYD1_k127_4848299_29 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000005237 267.0
LYD1_k127_4848299_3 Zn_pept - - - 8.932e-242 758.0
LYD1_k127_4848299_30 Ribosomal protein L11 methyltransferase (PrmA) K00564 - 2.1.1.172 0.000000000000000000000000000000000000000000000000000000000000000000000000004194 267.0
LYD1_k127_4848299_31 PFAM regulatory protein, ArsR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008323 256.0
LYD1_k127_4848299_32 Plays a role in the regulation of phosphate uptake K02039 - - 0.00000000000000000000000000000000000000000000000000000000000000001013 231.0
LYD1_k127_4848299_33 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000211 220.0
LYD1_k127_4848299_34 SUF system FeS assembly protein, NifU family K04488 - - 0.0000000000000000000000000000000000000000000000000000000000009649 212.0
LYD1_k127_4848299_35 Plays a role in the regulation of phosphate uptake K02039 - - 0.000000000000000000000000000000000000000000000000000000000002496 217.0
LYD1_k127_4848299_36 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.00000000000000000000000000000000000000000000000000000000001138 208.0
LYD1_k127_4848299_37 CHAD - - - 0.0000000000000000000000000000000000000000000000000000000176 213.0
LYD1_k127_4848299_38 methyltransferase - - - 0.0000000000000000000000000000000000000000000005705 175.0
LYD1_k127_4848299_4 TIGRFAM FeS assembly protein SufD K09015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002067 614.0
LYD1_k127_4848299_40 Antibiotic biosynthesis monooxygenase K11530 - 5.3.1.32 0.00000000000000000000000000000000000002442 145.0
LYD1_k127_4848299_41 PFAM Rieske 2Fe-2S domain protein K00363,K05710 - 1.7.1.15 0.0000000000000000000000000000000000001048 144.0
LYD1_k127_4848299_42 Pfam:DUF59 - - - 0.00000000000000000000000000000000005827 136.0
LYD1_k127_4848299_43 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.00000000000000000000000000003076 120.0
LYD1_k127_4848299_44 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.0000000000000000000000000006621 115.0
LYD1_k127_4848299_46 Glutathione S-transferase, N-terminal domain - - - 0.000000000000000007262 85.0
LYD1_k127_4848299_5 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005282 589.0
LYD1_k127_4848299_6 PFAM Radical SAM domain protein K22227 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 512.0
LYD1_k127_4848299_7 NAD(P)H-binding K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001559 506.0
LYD1_k127_4848299_8 PFAM peptidase M24 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006711 501.0
LYD1_k127_492049_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1540.0
LYD1_k127_492049_1 Glycyl-tRNA synthetase alpha subunit K14164 - 6.1.1.14 0.0 1309.0
LYD1_k127_492049_10 DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity K03581 - 3.1.11.5 2.466e-239 760.0
LYD1_k127_492049_100 Domain of unknown function (DUF4491) - - - 0.0000000000000000000000000001136 119.0
LYD1_k127_492049_101 COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase - - - 0.0000000000000000000000000001508 130.0
LYD1_k127_492049_102 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000463 128.0
LYD1_k127_492049_104 PFAM Cold-shock protein, DNA-binding K03704 - - 0.0000000000000000000000007537 104.0
LYD1_k127_492049_105 Domain of unknown function (DUF3786) - - - 0.00000000000000000000001311 110.0
LYD1_k127_492049_106 Thioredoxin domain - - - 0.00000000000000000000002089 102.0
LYD1_k127_492049_108 T4-like virus tail tube protein gp19 - - - 0.0000000000000000000000294 104.0
LYD1_k127_492049_109 Haloacid dehalogenase-like hydrolase K07025 - - 0.0000000000000000000002306 104.0
LYD1_k127_492049_11 Predicted permease K07089 - - 7.764e-226 709.0
LYD1_k127_492049_112 SpoVT / AbrB like domain K07172 - - 0.0000000000000316 75.0
LYD1_k127_492049_113 - - - - 0.00000000003332 68.0
LYD1_k127_492049_114 - - - - 0.0000000004525 63.0
LYD1_k127_492049_115 self proteolysis - - - 0.00000007761 64.0
LYD1_k127_492049_116 sulfurtransferase - - - 0.0000007086 61.0
LYD1_k127_492049_117 - - - - 0.000009357 57.0
LYD1_k127_492049_118 peptidyl-tyrosine sulfation - - - 0.00002642 56.0
LYD1_k127_492049_119 Peptidoglycan-binding LysM - - - 0.00004623 51.0
LYD1_k127_492049_12 PFAM ABC transporter related K06158 - - 7.847e-217 691.0
LYD1_k127_492049_120 Bacterial protein of unknown function (DUF937) - - - 0.0005094 51.0
LYD1_k127_492049_13 PFAM glycoside hydrolase, family 1 K05350 - 3.2.1.21 7.512e-209 657.0
LYD1_k127_492049_14 metal-dependent phosphohydrolase, HD sub domain K07037 - - 5.307e-200 645.0
LYD1_k127_492049_15 Belongs to the HMG-CoA reductase family K00054 - 1.1.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000371 588.0
LYD1_k127_492049_16 histidine kinase, dimerisation and phosphoacceptor region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 581.0
LYD1_k127_492049_17 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005999 601.0
LYD1_k127_492049_18 PFAM Bile acid sodium symporter K03325 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004891 558.0
LYD1_k127_492049_19 helix_turn_helix, Lux Regulon K03556 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005771 583.0
LYD1_k127_492049_2 Methionine synthase K00548 - 2.1.1.13 0.0 1148.0
LYD1_k127_492049_20 modification enzyme, MiaB family K18707 - 2.8.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004219 546.0
LYD1_k127_492049_21 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005227 545.0
LYD1_k127_492049_22 PFAM aminotransferase class-III K01845 - 5.4.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008597 542.0
LYD1_k127_492049_23 Radical SAM superfamily K06937 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007934 548.0
LYD1_k127_492049_24 3-Oxoacyl- acyl-carrier-protein (ACP) synthase III domain protein K01641 - 2.3.3.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003346 534.0
LYD1_k127_492049_25 Beta-galactosidase trimerisation domain K12308 - 3.2.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006028 552.0
LYD1_k127_492049_26 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001846 495.0
LYD1_k127_492049_27 Peptidase family S58 K01266 - 3.4.11.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001353 487.0
LYD1_k127_492049_28 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002985 467.0
LYD1_k127_492049_29 PFAM Uncharacterised BCR, COG1649 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005128 462.0
LYD1_k127_492049_3 phenylalanyl-tRNA synthetase beta subunit K01890 - 6.1.1.20 0.0 1086.0
LYD1_k127_492049_30 Domain of unknown function (DUF4438) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 460.0
LYD1_k127_492049_31 TIGRFAM cell envelope-related function transcriptional attenuator, LytR CpsA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000551 460.0
LYD1_k127_492049_32 Monogalactosyldiacylglycerol synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003168 448.0
LYD1_k127_492049_33 Polyphosphate kinase 2 (PPK2) K22468 - 2.7.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001874 430.0
LYD1_k127_492049_34 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000709 429.0
LYD1_k127_492049_35 TIGRFAM cell envelope-related function transcriptional attenuator, LytR CpsA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 434.0
LYD1_k127_492049_36 Putative pyruvate format-lyase activating enzyme (DUF1786) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005054 426.0
LYD1_k127_492049_37 Oxidoreductase family, C-terminal alpha/beta domain K00010 - 1.1.1.18,1.1.1.369 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000685 422.0
LYD1_k127_492049_38 NAD synthase K01916 - 6.3.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 419.0
LYD1_k127_492049_39 Belongs to the ALAD family K01698 - 4.2.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003695 417.0
LYD1_k127_492049_4 FAD linked oxidases, C-terminal domain K18930 - - 3.106e-309 975.0
LYD1_k127_492049_40 Fe-S oxidoreductases K22227 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001855 412.0
LYD1_k127_492049_41 Major facilitator Superfamily K08217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007347 413.0
LYD1_k127_492049_42 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006214 408.0
LYD1_k127_492049_43 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003383 409.0
LYD1_k127_492049_44 Xylose isomerase domain protein TIM barrel K03335 - 4.2.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009261 398.0
LYD1_k127_492049_45 deoxyribonuclease IV (phage-T4-induced) activity K01151 - 3.1.21.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006811 388.0
LYD1_k127_492049_46 Polyphosphate kinase 2 (PPK2) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002481 377.0
LYD1_k127_492049_47 Belongs to the binding-protein-dependent transport system permease family K01997,K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003298 384.0
LYD1_k127_492049_48 Belongs to the binding-protein-dependent transport system permease family K01997,K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007255 368.0
LYD1_k127_492049_49 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 359.0
LYD1_k127_492049_5 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 2.684e-302 940.0
LYD1_k127_492049_50 PFAM ABC transporter related K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002104 361.0
LYD1_k127_492049_51 Transmembrane secretion effector K08225 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008659 362.0
LYD1_k127_492049_52 KduI/IolB family K03337 - 5.3.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008485 354.0
LYD1_k127_492049_53 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 355.0
LYD1_k127_492049_54 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 340.0
LYD1_k127_492049_55 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000742 331.0
LYD1_k127_492049_56 Redoxin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001898 327.0
LYD1_k127_492049_57 aldo-keto reductase (NADP) activity K05275 - 1.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000369 321.0
LYD1_k127_492049_58 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 315.0
LYD1_k127_492049_59 Saccharopine dehydrogenase NADP binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004237 318.0
LYD1_k127_492049_6 Belongs to the TPP enzyme family K03336 GO:0006629,GO:0006644,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009056,GO:0009395,GO:0009987,GO:0016042,GO:0019637,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0046434,GO:0071704,GO:1901575 3.7.1.22 1.16e-289 900.0
LYD1_k127_492049_60 energy transducer activity K03531,K03832 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005232 326.0
LYD1_k127_492049_61 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000287 316.0
LYD1_k127_492049_62 ABC transporter K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003335 300.0
LYD1_k127_492049_63 COGs COG2211 Na melibiose symporter and related transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004319 306.0
LYD1_k127_492049_64 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002786 295.0
LYD1_k127_492049_65 acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005021 294.0
LYD1_k127_492049_66 helix_turn _helix lactose operon repressor K05499 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002186 288.0
LYD1_k127_492049_67 COGs COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009516 276.0
LYD1_k127_492049_68 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03769 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001939 276.0
LYD1_k127_492049_69 carbohydrate derivative metabolic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002683 255.0
LYD1_k127_492049_7 elongation factor Tu domain 2 protein K06207 - - 6.8e-289 899.0
LYD1_k127_492049_70 PFAM leucine-rich repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001059 250.0
LYD1_k127_492049_71 Protein of unknown function (DUF1349) K09702 - - 0.000000000000000000000000000000000000000000000000000000000000000000001524 241.0
LYD1_k127_492049_72 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000002501 241.0
LYD1_k127_492049_73 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.0000000000000000000000000000000000000000000000000000000000000000002121 231.0
LYD1_k127_492049_74 Serine threonine protein kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000004094 259.0
LYD1_k127_492049_75 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218,K03437 - 2.1.1.185 0.00000000000000000000000000000000000000000000000000000000000000000602 234.0
LYD1_k127_492049_76 PFAM TM1410 hypothetical-related protein K21006 - - 0.0000000000000000000000000000000000000000000000000000000000000001358 244.0
LYD1_k127_492049_77 Serine aminopeptidase, S33 K03928 - 3.1.1.1 0.00000000000000000000000000000000000000000000000000000000000004361 222.0
LYD1_k127_492049_78 PFAM NAD-dependent epimerase dehydratase K00091 - 1.1.1.219 0.000000000000000000000000000000000000000000000000000000000002898 220.0
LYD1_k127_492049_79 Glyoxalase-like domain - - - 0.00000000000000000000000000000000000000000000000000000000006996 210.0
LYD1_k127_492049_8 TIGRFAM methylmalonyl-CoA mutase, large subunit K01847,K01848 - 5.4.99.2 3.571e-268 833.0
LYD1_k127_492049_80 PFAM major facilitator superfamily MFS_1 - - - 0.00000000000000000000000000000000000000000000000000001969 207.0
LYD1_k127_492049_81 ROK family K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000001982 201.0
LYD1_k127_492049_83 Toxic component of a toxin-antitoxin (TA) module K07171 - - 0.0000000000000000000000000000000000000000000000003155 177.0
LYD1_k127_492049_84 PFAM Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.0000000000000000000000000000000000000000000000009344 178.0
LYD1_k127_492049_85 PFAM diacylglycerol kinase K00901 - 2.7.1.107 0.000000000000000000000000000000000000000000000001596 178.0
LYD1_k127_492049_86 Protein of unknown function (DUF1810) - - - 0.00000000000000000000000000000000000000000000002545 175.0
LYD1_k127_492049_87 Low molecular weight phosphotyrosine protein phosphatase K03741 - 1.20.4.1 0.00000000000000000000000000000000000000000001457 165.0
LYD1_k127_492049_88 Belongs to the precorrin methyltransferase family K02302,K02303,K13542 - 1.3.1.76,2.1.1.107,4.2.1.75,4.99.1.4 0.0000000000000000000000000000000000000000000345 170.0
LYD1_k127_492049_89 Yqey-like protein K09117 - - 0.000000000000000000000000000000000000000002057 160.0
LYD1_k127_492049_9 Homocysteine S-methyltransferase K00297,K00547 - 1.5.1.20,2.1.1.10 6.39e-266 838.0
LYD1_k127_492049_91 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins - - - 0.000000000000000000000000000000000000000006149 164.0
LYD1_k127_492049_92 Scavenger mRNA decapping enzyme C-term binding K02503 - - 0.0000000000000000000000000000000000000001505 154.0
LYD1_k127_492049_93 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000006941 154.0
LYD1_k127_492049_94 PFAM Stage V sporulation protein S K06416 - - 0.00000000000000000000000000000001136 129.0
LYD1_k127_492049_95 Transport permease protein K01992 - - 0.0000000000000000000000000000001103 139.0
LYD1_k127_492049_96 helix_turn_helix, Arsenical Resistance Operon Repressor K21903 - - 0.0000000000000000000000000000005745 126.0
LYD1_k127_492049_97 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.0000000000000000000000000000008044 126.0
LYD1_k127_492049_99 lactoylglutathione lyase activity - - - 0.00000000000000000000000000008182 120.0
LYD1_k127_4992685_0 PFAM CO dehydrogenase acetyl-CoA synthase complex beta subunit K14138 - 2.3.1.169 5.914e-272 856.0
LYD1_k127_4992685_1 TIGRFAM Carbon-monoxide dehydrogenase, catalytic subunit K00198 - 1.2.7.4 8.704e-220 700.0
LYD1_k127_4992685_11 CobQ/CobB/MinD/ParA nucleotide binding domain K07321 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003921 274.0
LYD1_k127_4992685_12 Methylenetetrahydrofolate reductase K00297,K00547 - 1.5.1.20,2.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000004617 276.0
LYD1_k127_4992685_13 Psort location Cytoplasmic, score - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004847 276.0
LYD1_k127_4992685_14 Nucleoside H+ symporter K05820 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003123 271.0
LYD1_k127_4992685_15 PFAM Cobyrinic acid ac-diamide synthase K07321 - - 0.000000000000000000000000000000000000000000000000000000000000000001204 236.0
LYD1_k127_4992685_16 Pyridine nucleotide-disulphide oxidoreductase K03387 - - 0.000000000000000000000000000000000000000000000000000000000000000005141 235.0
LYD1_k127_4992685_17 Fructose-1,6-bisphosphate aldolase, class II K01624 - 4.1.2.13 0.0000000000000000000000000000000000000000000000000003603 195.0
LYD1_k127_4992685_18 PFAM dihydropteroate synthase, DHPS K15023 - 2.1.1.258 0.00000000000000000000000000000000000000000000000001879 193.0
LYD1_k127_4992685_19 PFAM Respiratory-chain NADH dehydrogenase 24 Kd subunit K00334 - 1.6.5.3 0.00000000000000000000000000000000000000000000000002644 188.0
LYD1_k127_4992685_2 Malic enzyme, NAD binding domain K00027,K00029 - 1.1.1.38,1.1.1.40 4.384e-206 649.0
LYD1_k127_4992685_20 pfkB family carbohydrate kinase K00847,K00852 - 2.7.1.15,2.7.1.4 0.0000000000000000000000000000000000000000000000001739 188.0
LYD1_k127_4992685_21 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000007416 166.0
LYD1_k127_4992685_22 PFAM phospholipase Carboxylesterase K06999 - - 0.000000000000000000000000007361 119.0
LYD1_k127_4992685_23 Nucleotidyltransferase domain - - - 0.0000000000000000000363 93.0
LYD1_k127_4992685_24 WD-40 repeat - - - 0.0000000000000000002683 103.0
LYD1_k127_4992685_27 4Fe-4S dicluster domain K03390 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000007783 52.0
LYD1_k127_4992685_28 Cyclic nucleotide-monophosphate binding domain - - - 0.00002792 49.0
LYD1_k127_4992685_3 Belongs to the glycosyl hydrolase 5 (cellulase A) family K01190,K05350,K12308 - 3.2.1.21,3.2.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008036 608.0
LYD1_k127_4992685_4 Domain of unknown function (DUF4445) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 516.0
LYD1_k127_4992685_5 Glycosyl hydrolases family 32 K01212,K03332 - 3.2.1.65,3.2.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 429.0
LYD1_k127_4992685_6 Glycosyl Hydrolase Family 88 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002555 394.0
LYD1_k127_4992685_7 CO dehydrogenase/acetyl-CoA synthase delta subunit K00197 - 2.1.1.245 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008661 396.0
LYD1_k127_4992685_8 PFAM purine or other phosphorylase family 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005341 340.0
LYD1_k127_4992685_9 one-carbon metabolic process K00194,K00198 - 1.2.7.4,2.1.1.245 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004759 315.0
LYD1_k127_5017822_0 Phosphoglucomutase/phosphomannomutase, C-terminal domain K01835 GO:0000271,GO:0003674,GO:0003824,GO:0004614,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0005996,GO:0006006,GO:0006012,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016052,GO:0016853,GO:0016866,GO:0016868,GO:0019318,GO:0019320,GO:0019388,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0055114,GO:0071704,GO:1901575,GO:1901576 5.4.2.2 9.336e-262 816.0
LYD1_k127_5017822_1 PfkB domain protein K00874 - 2.7.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002263 584.0
LYD1_k127_5017822_2 Belongs to the GPI family K01810 - 5.3.1.9 0.000000000000000000000000000000000000003053 151.0
LYD1_k127_5017822_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000005968 56.0
LYD1_k127_5080196_0 Glycosyl hydrolases family 31 K01187 - 3.2.1.20 9.87e-303 958.0
LYD1_k127_5080196_1 Glycosyl hydrolases family 2, TIM barrel domain - - - 2.667e-232 745.0
LYD1_k127_5080196_10 PFAM regulatory protein, MerR K22491 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 348.0
LYD1_k127_5080196_11 Alpha beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001728 339.0
LYD1_k127_5080196_12 glycerophosphodiester transmembrane transport K02026 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001771 341.0
LYD1_k127_5080196_13 transmembrane transport K02025,K05814,K10118,K10237,K10241,K15771,K17235,K17316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009926 307.0
LYD1_k127_5080196_14 Alcohol dehydrogenase GroES-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001933 314.0
LYD1_k127_5080196_15 3-oxo-5-alpha-steroid 4-dehydrogenase K12343 - 1.3.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003558 293.0
LYD1_k127_5080196_16 ethanolamine kinase activity K04343,K07251,K18844 - 2.7.1.72,2.7.1.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 293.0
LYD1_k127_5080196_17 Glycosyl hydrolases family 16 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002903 292.0
LYD1_k127_5080196_18 purine nucleotide biosynthetic process K02529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005135 255.0
LYD1_k127_5080196_19 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005876 259.0
LYD1_k127_5080196_2 Glycosyl transferase family 21 - - - 6.386e-213 686.0
LYD1_k127_5080196_20 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002767 246.0
LYD1_k127_5080196_21 polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006241 246.0
LYD1_k127_5080196_22 myo-inosose-2 dehydratase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000002716 258.0
LYD1_k127_5080196_23 alcohol dehydrogenase K13953 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000004634 241.0
LYD1_k127_5080196_24 carbohydrate transport K02027 - - 0.0000000000000000000000000000000000000000000000000003204 202.0
LYD1_k127_5080196_25 Pfam Polyketide cyclase dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000000000000005447 184.0
LYD1_k127_5080196_26 COG NOG14600 non supervised orthologous group - - - 0.00000000000000000000000000000000000000000000015 169.0
LYD1_k127_5080196_27 PFAM alpha beta hydrolase fold - - - 0.0000000000000000000000000000000003259 138.0
LYD1_k127_5080196_28 very-long-chain-acyl-CoA dehydrogenase activity K01007,K18845 - 2.1.1.179,2.7.9.2 0.00000000000000000000000000000001182 147.0
LYD1_k127_5080196_3 Beta-galactosidase - - - 9.487e-194 625.0
LYD1_k127_5080196_30 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000001093 117.0
LYD1_k127_5080196_31 PFAM alpha beta hydrolase fold - - - 0.0000000000000000000002788 100.0
LYD1_k127_5080196_32 Serine phosphatase RsbU regulator of sigma subunit K07315 - 3.1.3.3 0.00000000000001921 86.0
LYD1_k127_5080196_34 COG NOG15344 non supervised orthologous group - - - 0.000000004847 57.0
LYD1_k127_5080196_35 - - - - 0.00000000506 63.0
LYD1_k127_5080196_36 - - - - 0.00000004551 55.0
LYD1_k127_5080196_38 Beta-galactosidase - - - 0.000001201 61.0
LYD1_k127_5080196_4 PFAM peptidase S45 penicillin amidase K01434 - 3.5.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005147 568.0
LYD1_k127_5080196_5 Glycine radical K00656 - 2.3.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004347 546.0
LYD1_k127_5080196_6 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 392.0
LYD1_k127_5080196_7 TIGRFAM cation diffusion facilitator family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 357.0
LYD1_k127_5080196_8 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000268 353.0
LYD1_k127_5080196_9 Membrane protein involved in the export of O-antigen and teichoic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 374.0
LYD1_k127_5090182_0 Terminase-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004599 469.0
LYD1_k127_5090182_1 ROK family K00847 - 2.7.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000212 436.0
LYD1_k127_5090182_10 Subtilase family K08651 - 3.4.21.66 0.00000000000000000000000000000000000000000000000000000000000000000000008944 263.0
LYD1_k127_5090182_11 Phage portal protein, lambda family - - - 0.000000000000000000000000000000000000000000000000000000008592 216.0
LYD1_k127_5090182_12 DinB superfamily - - - 0.00000000000000000000000000000000000000000000000000000001358 202.0
LYD1_k127_5090182_13 Tyrosine phosphatase family - - - 0.00000000000000000000000000000000000000000000000000003228 200.0
LYD1_k127_5090182_14 TIGRFAM conserved - - - 0.00000000000000000000000000000000000000000000000000009489 189.0
LYD1_k127_5090182_15 Protein of unknown function (DUF2652) - - - 0.0000000000000000000000000000000000000000000000002094 192.0
LYD1_k127_5090182_16 oligosaccharyl transferase activity K07151 - 2.4.99.18 0.0000000000000000000000000000000000000000000000002923 203.0
LYD1_k127_5090182_17 Collagen triple helix repeat (20 copies) - - - 0.000000000000000000000000000000000000000000000004323 190.0
LYD1_k127_5090182_18 UDP-glucoronosyl and UDP-glucosyl transferase - - - 0.00000000000000000000000000000000000002153 160.0
LYD1_k127_5090182_19 phosphorelay signal transduction system - - - 0.00000000000000000000000000000008471 134.0
LYD1_k127_5090182_2 amino acid activation for nonribosomal peptide biosynthetic process K03641,K20276 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003749 401.0
LYD1_k127_5090182_20 UDP-4-amino-4-deoxy-L-arabinose aminotransferase K13010 - 2.6.1.102 0.000000000000000000000000000004424 123.0
LYD1_k127_5090182_21 nucleotidyltransferase activity K07076 - - 0.000000000000000000000000004672 113.0
LYD1_k127_5090182_22 Parallel beta-helix repeats - - - 0.0000000000000000000002022 113.0
LYD1_k127_5090182_23 PKD domain - - - 0.000000000000000000004356 104.0
LYD1_k127_5090182_24 Glycoside Hydrolase K07273 - - 0.0000000000001302 81.0
LYD1_k127_5090182_25 Endonuclease/Exonuclease/phosphatase family K07004 - - 0.000000000003776 72.0
LYD1_k127_5090182_26 PHP domain K04477 - - 0.0000000003446 69.0
LYD1_k127_5090182_27 PHP domain K04477 - - 0.0000008862 55.0
LYD1_k127_5090182_28 - - - - 0.00004383 52.0
LYD1_k127_5090182_3 Peptidase family S41 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005272 403.0
LYD1_k127_5090182_30 FIC family - - - 0.0005751 51.0
LYD1_k127_5090182_4 O-methyltransferase K15886,K16034,K20421,K22269 - 2.1.1.303,2.1.1.343,2.3.1.235 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000857 381.0
LYD1_k127_5090182_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003116 362.0
LYD1_k127_5090182_6 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001893 312.0
LYD1_k127_5090182_7 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 292.0
LYD1_k127_5090182_8 Mu-like prophage major head subunit gpT - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002014 304.0
LYD1_k127_5090182_9 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004113 267.0
LYD1_k127_5100610_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.0 1426.0
LYD1_k127_5100610_1 domain, Protein K01219,K17624 - 3.2.1.81,3.2.1.97 4.608e-297 929.0
LYD1_k127_5100610_10 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002568 358.0
LYD1_k127_5100610_11 Transposase DDE domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004951 338.0
LYD1_k127_5100610_12 Beta-L-arabinofuranosidase, GH127 K09955 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002049 313.0
LYD1_k127_5100610_13 hydrolase family 20, catalytic K12373 - 3.2.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 294.0
LYD1_k127_5100610_14 Glycosyl hydrolases family 16 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000251 282.0
LYD1_k127_5100610_15 Phosphoglycerate mutase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001991 263.0
LYD1_k127_5100610_16 Cytochrome b/b6/petB K00412,K03888 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004625 243.0
LYD1_k127_5100610_17 3-demethylubiquinone-9 3-O-methyltransferase activity K00568 - 2.1.1.222,2.1.1.64 0.00000000000000000000000000000000000000000000000000000000000000007906 229.0
LYD1_k127_5100610_18 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000000000000001382 231.0
LYD1_k127_5100610_19 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000001365 233.0
LYD1_k127_5100610_2 hydrolase, family 65, central catalytic K05342 - 2.4.1.64 4.988e-265 837.0
LYD1_k127_5100610_20 Response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000001906 213.0
LYD1_k127_5100610_21 helix_turn_helix, cAMP Regulatory protein K21564 - - 0.000000000000000000000000000000000000000000000000001068 192.0
LYD1_k127_5100610_23 peptidyl-prolyl cis-trans isomerase K01802,K03772 - 5.2.1.8 0.00000000000000000000000000000000000000000002438 168.0
LYD1_k127_5100610_24 - - - - 0.0000000000000000000000000000000000000000002078 164.0
LYD1_k127_5100610_25 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000001771 171.0
LYD1_k127_5100610_26 hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000000000000001482 147.0
LYD1_k127_5100610_27 Cytochrome c - - - 0.000000000000000000000000000000000111 153.0
LYD1_k127_5100610_28 homoserine kinase type II (protein kinase fold) - - - 0.0000000000000000000000000000004328 134.0
LYD1_k127_5100610_29 Nitroreductase family K19285 - 1.5.1.38 0.00000000000000000000000003097 118.0
LYD1_k127_5100610_3 Phosphoribulokinase / Uridine kinase family K00876 - 2.7.1.48 2.127e-213 677.0
LYD1_k127_5100610_30 Rieske [2Fe-2S] domain K03886 - - 0.0000000000000000000000001622 113.0
LYD1_k127_5100610_32 Fibronectin type 3 domain - - - 0.000000000000000000001488 111.0
LYD1_k127_5100610_34 AraC-like ligand binding domain - - - 0.000000000000003721 81.0
LYD1_k127_5100610_35 Cytochrome b(C-terminal)/b6/petD - - - 0.00000000000001314 88.0
LYD1_k127_5100610_36 adenylate kinase activity - - - 0.0000000002017 69.0
LYD1_k127_5100610_37 Xylose isomerase-like TIM barrel K03335 - 4.2.1.44 0.0000000002981 70.0
LYD1_k127_5100610_38 - - - - 0.000000002142 59.0
LYD1_k127_5100610_39 - - - - 0.00000001305 69.0
LYD1_k127_5100610_4 Glycosyl hydrolase family 53 - - - 1.064e-205 658.0
LYD1_k127_5100610_40 Polysaccharide deacetylase K22278 - 3.5.1.104 0.00000003979 64.0
LYD1_k127_5100610_41 antibiotic catabolic process K13277 - - 0.0000002896 64.0
LYD1_k127_5100610_42 homoserine kinase activity - - - 0.0000005951 61.0
LYD1_k127_5100610_43 - - - - 0.00002234 57.0
LYD1_k127_5100610_5 denitrification pathway K15876 GO:0003674,GO:0003824,GO:0005575,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0022900,GO:0031224,GO:0044237,GO:0044425,GO:0045333,GO:0055114 - 1.263e-194 623.0
LYD1_k127_5100610_6 PFAM Aminotransferase class I and II K05825 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002013 599.0
LYD1_k127_5100610_7 Dipeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004099 570.0
LYD1_k127_5100610_8 PFAM Pyridoxal-dependent decarboxylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 563.0
LYD1_k127_5100610_9 DUF3160 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006323 396.0
LYD1_k127_5257481_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 1136.0
LYD1_k127_5257481_1 Belongs to the argininosuccinate synthase family. Type K01940 - 6.3.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000183 615.0
LYD1_k127_5257481_2 Catalyzes the NADPH-dependent reduction of LysW - aminoadipate 6-phosphate to yield LysW -aminoadipate 6- semialdehyde K05829 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004839 496.0
LYD1_k127_5257481_3 Belongs to the CarA family K01956 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000557 443.0
LYD1_k127_5257481_4 Belongs to the RimK family K05827 - 6.3.2.43 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003339 399.0
LYD1_k127_5257481_5 Bacitracin ABC transporter, ATP-binding protein K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009421 333.0
LYD1_k127_5257481_6 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000001094 239.0
LYD1_k127_5257481_7 SMART Tetratricopeptide domain protein - - - 0.0000000000000000000000000000000000000000000002792 186.0
LYD1_k127_5257481_8 DNA-binding transcription factor activity K03892 - - 0.00000000000000000000000003902 110.0
LYD1_k127_5257481_9 TIGRFAM lysine biosynthesis protein LysW K05826 - - 0.0000000000000117 75.0
LYD1_k127_5309309_0 Subunit R is required for both nuclease and ATPase activities, but not for modification K01153 - 3.1.21.3 0.0 1501.0
LYD1_k127_5309309_1 TIGRFAM type I restriction system adenine methylase (hsdM) K03427 - 2.1.1.72 0.0 1070.0
LYD1_k127_5309309_10 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000206 467.0
LYD1_k127_5309309_11 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007314 449.0
LYD1_k127_5309309_12 Hydantoinaseoxoprolinase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000227 430.0
LYD1_k127_5309309_14 Protein of unknown function DUF45 K07043 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002033 350.0
LYD1_k127_5309309_15 PFAM regulatory protein, MerR K22491 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 358.0
LYD1_k127_5309309_16 Type I restriction modification DNA specificity domain K01154 - 3.1.21.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002466 349.0
LYD1_k127_5309309_17 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004013 336.0
LYD1_k127_5309309_18 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004283 343.0
LYD1_k127_5309309_19 ATPases associated with a variety of cellular activities K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007903 300.0
LYD1_k127_5309309_2 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 0.0 1018.0
LYD1_k127_5309309_20 PFAM Xylose isomerase domain protein TIM barrel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002262 299.0
LYD1_k127_5309309_21 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003575 271.0
LYD1_k127_5309309_22 2Fe-2S -binding domain protein K03518 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000009593 261.0
LYD1_k127_5309309_23 L-seryl-tRNASec selenium transferase activity K01042 - 2.9.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000004419 262.0
LYD1_k127_5309309_24 Domain of unknown function (DUF2088) - - - 0.00000000000000000000000000000000000000000000000000000000000000000008406 247.0
LYD1_k127_5309309_25 NYN domain - - - 0.00000000000000000000000000000000000000000000000000000000000001178 223.0
LYD1_k127_5309309_27 Glycerophosphodiester phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000001462 221.0
LYD1_k127_5309309_28 Streptomycin adenylyltransferase K05593 - - 0.00000000000000000000000000000000000000000000000000001726 199.0
LYD1_k127_5309309_29 2-keto-3-deoxy-L-rhamnonate aldolase activity K02510 - 4.1.2.52 0.0000000000000000000000000000000000000000000000000007133 194.0
LYD1_k127_5309309_3 FAD linked oxidase domain protein - - - 1e-323 1018.0
LYD1_k127_5309309_30 PFAM pyridoxamine 5'-phosphate oxidase-related - - - 0.000000000000000000000000000000000000000000000000706 180.0
LYD1_k127_5309309_31 PFAM Cobalt transport protein K16785 - - 0.00000000000000000000000000000000000000000000008251 179.0
LYD1_k127_5309309_32 cellulase activity - - - 0.00000000000000000000000000000000000000000005648 175.0
LYD1_k127_5309309_33 peroxiredoxin activity - - - 0.000000000000000000000001464 111.0
LYD1_k127_5309309_34 - - - - 0.0000000000000000000009498 110.0
LYD1_k127_5309309_35 Mo-molybdopterin cofactor metabolic process K03636 - - 0.0000000000000001934 84.0
LYD1_k127_5309309_36 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998 - 0.000000000000006403 86.0
LYD1_k127_5309309_37 Nudix hydrolase K03574 - 3.6.1.55 0.0000000003052 68.0
LYD1_k127_5309309_38 - - - - 0.00000003136 61.0
LYD1_k127_5309309_39 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000003824 52.0
LYD1_k127_5309309_4 L-arabinose isomerase activity K01804 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008733,GO:0009056,GO:0009058,GO:0009987,GO:0016052,GO:0016853,GO:0016860,GO:0016861,GO:0019321,GO:0019323,GO:0019566,GO:0019568,GO:0019569,GO:0019572,GO:0019637,GO:0044237,GO:0044238,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046373,GO:0051167,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901159,GO:1901575,GO:1901576 5.3.1.4 8.595e-245 767.0
LYD1_k127_5309309_40 cyclopropane-fatty-acyl-phospholipid synthase K00574 - 2.1.1.79 0.0003761 47.0
LYD1_k127_5309309_5 Protein of unknown function (DUF2961) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007761 603.0
LYD1_k127_5309309_6 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004219 550.0
LYD1_k127_5309309_7 PFAM ABC transporter related K03529,K06166,K16786,K16787 - 2.7.8.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004697 520.0
LYD1_k127_5309309_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006025 485.0
LYD1_k127_5309309_9 Aminotransferase class-III K00823,K07250 - 2.6.1.19,2.6.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006291 480.0
LYD1_k127_5316361_0 Putative glucoamylase K13688 - - 1.995e-247 781.0
LYD1_k127_5316361_1 Fumarylacetoacetate (FAA) hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005563 275.0
LYD1_k127_5318985_0 Binding-protein-dependent transport system inner membrane component K17319 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007873 351.0
LYD1_k127_5318985_1 histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003672 346.0
LYD1_k127_5318985_2 PFAM Glucose-inhibited division protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002082 283.0
LYD1_k127_5318985_3 ABC transporter permease K17320 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001179 274.0
LYD1_k127_5318985_4 PhoQ Sensor K13924 - 2.1.1.80,3.1.1.61 0.000000000000000000000000000000000275 147.0
LYD1_k127_5387354_0 beta-galactosidase K12308 - 3.2.1.23 9.635e-311 964.0
LYD1_k127_5387354_1 Hypothetical glycosyl hydrolase 6 - - - 2.84e-304 944.0
LYD1_k127_5387354_10 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008729 573.0
LYD1_k127_5387354_100 FecR protein - - - 0.000000000000000000000000001327 130.0
LYD1_k127_5387354_101 Major Facilitator Superfamily - - - 0.00000000000000000000000005101 121.0
LYD1_k127_5387354_103 Protein of unknown function DUF86 - - - 0.0000000000000000000001574 100.0
LYD1_k127_5387354_105 PFAM Methyltransferase type 11 - - - 0.000000000000000000001662 104.0
LYD1_k127_5387354_106 RNHCP domain - - - 0.000000000000000000007383 99.0
LYD1_k127_5387354_108 Transposase - - - 0.000000000000002668 85.0
LYD1_k127_5387354_109 Belongs to the peptidase S26 family - - - 0.000000000000004901 83.0
LYD1_k127_5387354_11 PFAM oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002195 551.0
LYD1_k127_5387354_110 Phospholipase_D-nuclease N-terminal - - - 0.000000000000007538 76.0
LYD1_k127_5387354_111 domain protein - - - 0.0000000000001925 79.0
LYD1_k127_5387354_112 Putative membrane peptidase family (DUF2324) - - - 0.000000000001613 80.0
LYD1_k127_5387354_113 magnesium chelatase activity K03404,K07114 - 6.6.1.1 0.00000000001183 78.0
LYD1_k127_5387354_114 - - - - 0.00000000004374 76.0
LYD1_k127_5387354_115 antibiotic catabolic process K13277,K20276 - - 0.00000000403 70.0
LYD1_k127_5387354_116 Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid K18235 - - 0.00000004564 65.0
LYD1_k127_5387354_117 NB-ARC domain - - - 0.00000004898 61.0
LYD1_k127_5387354_118 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000009647 65.0
LYD1_k127_5387354_119 SMP-30/Gluconolaconase/LRE-like region - - - 0.0000001065 64.0
LYD1_k127_5387354_12 metallopeptidase activity K03568 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008975 548.0
LYD1_k127_5387354_120 Glycosyl transferases group 1 - - - 0.0000004394 62.0
LYD1_k127_5387354_121 - - - - 0.000001531 59.0
LYD1_k127_5387354_122 Peptidase_C39 like family - - - 0.00000302 60.0
LYD1_k127_5387354_123 COG3103 SH3 domain protein K01448 GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 3.5.1.28 0.000009198 58.0
LYD1_k127_5387354_124 Transcriptional regulator - - - 0.0000428 51.0
LYD1_k127_5387354_125 Tetratricopeptide repeat - - - 0.0003109 54.0
LYD1_k127_5387354_13 UDP-4-amino-4-deoxy-L-arabinose aminotransferase K19715 GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0016051,GO:0043170,GO:0044238,GO:0071704,GO:1901576 2.6.1.109 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000156 519.0
LYD1_k127_5387354_14 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002326 509.0
LYD1_k127_5387354_15 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006464 528.0
LYD1_k127_5387354_16 3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005873 493.0
LYD1_k127_5387354_17 Alcohol dehydrogenase GroES-like domain K00008 - 1.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002053 479.0
LYD1_k127_5387354_18 Zinc-binding dehydrogenase K00008 - 1.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000149 477.0
LYD1_k127_5387354_19 isomerase activity K10708 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0016829,GO:0016835,GO:0016836,GO:0042802 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002029 477.0
LYD1_k127_5387354_2 Amino acid permease - GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015179,GO:0015291,GO:0015297,GO:0015318,GO:0015711,GO:0015807,GO:0015849,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098656,GO:1902475,GO:1903825,GO:1905039 - 8.091e-280 872.0
LYD1_k127_5387354_20 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002461 465.0
LYD1_k127_5387354_21 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 463.0
LYD1_k127_5387354_22 Glycogen debranching enzyme, glucanotransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 454.0
LYD1_k127_5387354_23 Catalyzes the dehydration of D-mannonate K01686 - 4.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002107 447.0
LYD1_k127_5387354_24 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA K00784 - 3.1.26.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004291 437.0
LYD1_k127_5387354_25 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 454.0
LYD1_k127_5387354_26 magnesium chelatase activity K03404,K07114 - 6.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 443.0
LYD1_k127_5387354_27 Histidine kinase K07646 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003663 400.0
LYD1_k127_5387354_28 PFAM Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 382.0
LYD1_k127_5387354_29 Domain of unknown function (DUF4037) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001835 385.0
LYD1_k127_5387354_3 Family 4 glycosyl hydrolase K07406 - 3.2.1.22 2.226e-251 781.0
LYD1_k127_5387354_30 PFAM oxidoreductase, molybdopterin binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 369.0
LYD1_k127_5387354_31 Uroporphyrinogen decarboxylase (URO-D) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009391 368.0
LYD1_k127_5387354_32 Belongs to the UPF0173 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002092 361.0
LYD1_k127_5387354_33 ABC-3 protein K09819 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002219 365.0
LYD1_k127_5387354_34 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002766 379.0
LYD1_k127_5387354_35 Trehalose utilisation K09992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002346 354.0
LYD1_k127_5387354_36 exo-alpha-(2->6)-sialidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000457 355.0
LYD1_k127_5387354_37 AP endonuclease family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001721 349.0
LYD1_k127_5387354_38 peptidyl-lysine modification to peptidyl-hypusine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003432 361.0
LYD1_k127_5387354_39 MgtE intracellular N domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002089 353.0
LYD1_k127_5387354_4 Peptidase S9 prolyl oligopeptidase active site domain protein - - - 3.879e-250 787.0
LYD1_k127_5387354_40 amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000166 336.0
LYD1_k127_5387354_41 Belongs to the glycosyl hydrolase 30 family K01201 - 3.2.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004061 344.0
LYD1_k127_5387354_42 peptidase dimerisation domain protein K01295 - 3.4.17.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002974 336.0
LYD1_k127_5387354_43 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000519 328.0
LYD1_k127_5387354_44 transmembrane transport K02025,K05814,K10118,K10237,K10241,K15771,K17235,K17316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007049 332.0
LYD1_k127_5387354_45 PFAM major facilitator superfamily MFS_1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 331.0
LYD1_k127_5387354_46 PFAM amidohydrolase 2 K07045 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002803 321.0
LYD1_k127_5387354_47 COGs COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002257 317.0
LYD1_k127_5387354_48 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003595 327.0
LYD1_k127_5387354_49 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000481 314.0
LYD1_k127_5387354_5 Belongs to the glycosyl hydrolase 67 family - - - 3.889e-242 771.0
LYD1_k127_5387354_50 Putative modulator of DNA gyrase K03592 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 311.0
LYD1_k127_5387354_51 PFAM glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001303 305.0
LYD1_k127_5387354_52 Binding-protein-dependent transport system inner membrane component K02026 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004947 301.0
LYD1_k127_5387354_53 TIGRFAM NRAMP (natural resistance-associated macrophage protein) metal ion transporters - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 299.0
LYD1_k127_5387354_54 PFAM secretion protein HlyD family protein K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004931 301.0
LYD1_k127_5387354_55 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 297.0
LYD1_k127_5387354_56 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 289.0
LYD1_k127_5387354_57 pfkB family carbohydrate kinase K00852 - 2.7.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002535 290.0
LYD1_k127_5387354_58 Domain of unknown function (DUF4162) K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006287 274.0
LYD1_k127_5387354_59 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007444 272.0
LYD1_k127_5387354_6 PFAM cell divisionFtsK SpoIIIE K03466 - - 1.108e-227 731.0
LYD1_k127_5387354_60 DeoR C terminal sensor domain K02081 GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004483 269.0
LYD1_k127_5387354_61 Bacterial extracellular solute-binding protein K02027 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000483 267.0
LYD1_k127_5387354_62 Belongs to the bacterial solute-binding protein 9 family K02077,K09818 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002027 258.0
LYD1_k127_5387354_63 Manganese ABC transporter ATP-binding protein K02074,K09820,K11710,K19973 - 3.6.3.35 0.00000000000000000000000000000000000000000000000000000000000000000000002335 250.0
LYD1_k127_5387354_64 PFAM Iron-containing alcohol dehydrogenase K13954 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000002259 252.0
LYD1_k127_5387354_65 Fructosamine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002356 250.0
LYD1_k127_5387354_66 PFAM Vitamin B12 dependent methionine synthase, activation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000002385 233.0
LYD1_k127_5387354_67 Ferritin-like domain K03594 - 1.16.3.1 0.00000000000000000000000000000000000000000000000000000000000000001435 227.0
LYD1_k127_5387354_68 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000004345 233.0
LYD1_k127_5387354_69 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000001492 238.0
LYD1_k127_5387354_7 SMART Pyrrolo-quinoline quinone - - - 1.463e-199 642.0
LYD1_k127_5387354_70 ADP-heptose synthase, bifunctional sugar kinase adenylyltransferase K03272 - 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000000000000000006068 232.0
LYD1_k127_5387354_71 Methyltransferase small domain - - - 0.00000000000000000000000000000000000000000000000000000000000003422 224.0
LYD1_k127_5387354_72 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.0000000000000000000000000000000000000000000000000000000000009385 226.0
LYD1_k127_5387354_73 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000000000000000002838 210.0
LYD1_k127_5387354_74 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000003398 216.0
LYD1_k127_5387354_75 Glycosyltransferase WbsX - - - 0.0000000000000000000000000000000000000000000000000000000001492 218.0
LYD1_k127_5387354_76 heme binding - - - 0.0000000000000000000000000000000000000000000000000000000003402 216.0
LYD1_k127_5387354_77 cellular response to dsDNA K07178 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000246 211.0
LYD1_k127_5387354_78 Haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000000000000000000000000004083 206.0
LYD1_k127_5387354_79 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000001525 209.0
LYD1_k127_5387354_8 Belongs to the glycosyl hydrolase 5 (cellulase A) family K01190 - 3.2.1.23 2.246e-198 638.0
LYD1_k127_5387354_80 PFAM Uroporphyrinogen decarboxylase (URO-D) - - - 0.0000000000000000000000000000000000000000000000000000001685 213.0
LYD1_k127_5387354_81 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000002325 193.0
LYD1_k127_5387354_82 GlcNAc-PI de-N-acetylase K01463 - - 0.000000000000000000000000000000000000000000000000008793 189.0
LYD1_k127_5387354_83 -acetyltransferase - - - 0.0000000000000000000000000000000000000000000000001547 180.0
LYD1_k127_5387354_84 LysM domain - - - 0.0000000000000000000000000000000000000000000000007705 186.0
LYD1_k127_5387354_85 Belongs to the Fur family K03711 - - 0.00000000000000000000000000000000000000000000001449 176.0
LYD1_k127_5387354_86 Histidine kinase K07777,K19661,K21405 - 2.7.13.3 0.00000000000000000000000000000000000000000000003531 190.0
LYD1_k127_5387354_87 Acetyltransferase (GNAT) domain K03817 - - 0.000000000000000000000000000000000000000000002327 170.0
LYD1_k127_5387354_88 Protein of unknown function (DUF1349) K09702 - - 0.0000000000000000000000000000000000000000001221 166.0
LYD1_k127_5387354_89 aminoacyl-tRNA metabolism involved in translational fidelity K19055 - - 0.00000000000000000000000000000000000000001601 158.0
LYD1_k127_5387354_9 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 589.0
LYD1_k127_5387354_90 isomerase K03271 - 5.3.1.28 0.0000000000000000000000000000000000000000196 172.0
LYD1_k127_5387354_91 Transposase IS200 like - - - 0.000000000000000000000000000000000000006161 153.0
LYD1_k127_5387354_92 domain protein K20276 - - 0.00000000000000000000000000000000000002015 168.0
LYD1_k127_5387354_93 epimerase - - - 0.0000000000000000000000000000000000005878 152.0
LYD1_k127_5387354_94 - - - - 0.000000000000000000000000000000000001069 144.0
LYD1_k127_5387354_95 peptidase - - - 0.0000000000000000000000000000000004372 141.0
LYD1_k127_5387354_96 - - - - 0.0000000000000000000000000000000005046 142.0
LYD1_k127_5387354_97 Nucleotidyltransferase domain K07075 - - 0.00000000000000000000000000000006063 127.0
LYD1_k127_5387354_98 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000668 136.0
LYD1_k127_5387354_99 Thioesterase superfamily - - - 0.00000000000000000000000000001461 122.0
LYD1_k127_5390685_0 PFAM NADH-Ubiquinone oxidoreductase (complex I), chain 5 L domain protein K00341 - 1.6.5.3 1.293e-298 931.0
LYD1_k127_5390685_1 adenylyl cyclase class-3 4 guanylyl cyclase - - - 2.802e-288 928.0
LYD1_k127_5390685_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001905 458.0
LYD1_k127_5390685_11 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007199 459.0
LYD1_k127_5390685_12 PFAM Methicillin resistance protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003401 420.0
LYD1_k127_5390685_13 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001955 377.0
LYD1_k127_5390685_14 ABC transporter permease K02025 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000271 372.0
LYD1_k127_5390685_15 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003888 373.0
LYD1_k127_5390685_16 PFAM binding-protein-dependent transport systems inner membrane component K02025,K05814,K10118,K10237,K10241,K15771,K17235,K17316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004753 372.0
LYD1_k127_5390685_17 glycerophosphodiester transmembrane transport K02026 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 374.0
LYD1_k127_5390685_18 PFAM Methicillin resistance protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001405 370.0
LYD1_k127_5390685_19 Creatinine amidohydrolase K01470 - 3.5.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007181 349.0
LYD1_k127_5390685_2 PFAM extracellular solute-binding protein family 1 - - - 1.511e-276 880.0
LYD1_k127_5390685_20 alginic acid biosynthetic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006597 369.0
LYD1_k127_5390685_21 ABC transporter permease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005564 334.0
LYD1_k127_5390685_22 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006594 329.0
LYD1_k127_5390685_23 carbohydrate transport K02027 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002564 304.0
LYD1_k127_5390685_24 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002531 296.0
LYD1_k127_5390685_25 Binding-protein-dependent transport system inner membrane component K02026 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005239 279.0
LYD1_k127_5390685_26 Binding-protein-dependent transport system inner membrane component - - - 0.0000000000000000000000000000000000000000000000000000000000000000001068 240.0
LYD1_k127_5390685_27 PFAM transglutaminase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000001102 234.0
LYD1_k127_5390685_28 Protein of unknown function DUF58 - - - 0.0000000000000000000000000000000000000000000000000000001369 213.0
LYD1_k127_5390685_29 sh3 domain protein K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000002482 188.0
LYD1_k127_5390685_3 Short-chain dehydrogenase reductase SDR - - - 1.158e-245 775.0
LYD1_k127_5390685_31 Endoribonuclease L-PSP K09022 GO:0003674,GO:0003824,GO:0016787,GO:0019239 3.5.99.10 0.00000000000000000000000000000000000000001055 157.0
LYD1_k127_5390685_32 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.0000000000000000000000000000000000000001072 156.0
LYD1_k127_5390685_33 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0050136,GO:0055114,GO:0098796,GO:1902494 1.6.5.3 0.00000000000000000000000000000000000007302 145.0
LYD1_k127_5390685_34 protein maturation K13628 - - 0.000000000000000000000000000000000001438 141.0
LYD1_k127_5390685_35 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.0000000000000000000000000000003062 124.0
LYD1_k127_5390685_37 - - - - 0.000000000000000000000059 105.0
LYD1_k127_5390685_38 Yip1 domain - - - 0.000000000000000000006724 108.0
LYD1_k127_5390685_39 PFAM Bacterial extracellular solute-binding protein K15770 - - 0.0000000000000003495 92.0
LYD1_k127_5390685_4 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 1.872e-223 702.0
LYD1_k127_5390685_40 - - - - 0.000000003025 66.0
LYD1_k127_5390685_41 Belongs to the peptidase S1C family K04771,K04772 - 3.4.21.107 0.0001284 54.0
LYD1_k127_5390685_5 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002768 602.0
LYD1_k127_5390685_6 PFAM glycosidase PH1107-related K18785,K20885 - 2.4.1.319,2.4.1.320,2.4.1.339,2.4.1.340 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006018 522.0
LYD1_k127_5390685_7 transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003346 504.0
LYD1_k127_5390685_8 Alpha amylase, catalytic domain K01208 - 3.2.1.133,3.2.1.135,3.2.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 478.0
LYD1_k127_5390685_9 Bacterial sugar transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001335 478.0
LYD1_k127_556720_0 Pyridine nucleotide-disulphide oxidoreductase - - - 0.0 1477.0
LYD1_k127_556720_1 catalase activity K03782 GO:0000302,GO:0003674,GO:0003824,GO:0004096,GO:0004601,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016684,GO:0016999,GO:0017001,GO:0017144,GO:0020037,GO:0033554,GO:0034599,GO:0034614,GO:0035690,GO:0042221,GO:0042493,GO:0042542,GO:0042737,GO:0042743,GO:0042744,GO:0042802,GO:0044237,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0046906,GO:0048037,GO:0050896,GO:0051186,GO:0051187,GO:0051716,GO:0055114,GO:0070301,GO:0070887,GO:0071236,GO:0072593,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901363,GO:1901700,GO:1901701,GO:1990748 1.11.1.21 0.0 1252.0
LYD1_k127_556720_10 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 8.848e-236 734.0
LYD1_k127_556720_100 YHS domain - - - 0.000000000000000000509 88.0
LYD1_k127_556720_101 Cytochrome c K02275,K17223 - 1.9.3.1 0.0000000000000009758 81.0
LYD1_k127_556720_102 ATP synthase, subunit C K02124 - - 0.000000000000001198 78.0
LYD1_k127_556720_103 - - - - 0.0000000000003004 76.0
LYD1_k127_556720_104 PFAM single-stranded nucleic acid binding R3H domain protein K06346 - - 0.000000000001103 68.0
LYD1_k127_556720_105 PFAM peptidase C60, sortase A and B K07284 - 3.4.22.70 0.000000000001136 81.0
LYD1_k127_556720_107 COG1622 Heme copper-type cytochrome quinol oxidases, subunit 2 K02275 - 1.9.3.1 0.00000000124 69.0
LYD1_k127_556720_108 Cytochrome c - - - 0.00000001655 66.0
LYD1_k127_556720_109 Putative Flp pilus-assembly TadE/G-like - - - 0.00000001954 66.0
LYD1_k127_556720_11 Amidohydrolase family K01464,K01466 - 3.5.2.2,3.5.2.5 3.243e-221 694.0
LYD1_k127_556720_110 Produces ATP from ADP in the presence of a proton gradient across the membrane K02122 - - 0.00000009592 61.0
LYD1_k127_556720_111 domain, Protein - - - 0.0000001411 62.0
LYD1_k127_556720_112 - - - - 0.000000149 59.0
LYD1_k127_556720_113 Produces ATP from ADP in the presence of a proton gradient across the membrane K02121 - - 0.0000001812 61.0
LYD1_k127_556720_114 ThiS family K03636 - - 0.0000004135 56.0
LYD1_k127_556720_116 TadE family - - - 0.000003122 55.0
LYD1_k127_556720_117 PFAM TadE family protein - - - 0.0002951 54.0
LYD1_k127_556720_118 arabinose efflux permease K18567 - - 0.0003206 53.0
LYD1_k127_556720_12 Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit K02117 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008324,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0034220,GO:0036442,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044464,GO:0044769,GO:0046961,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132,GO:1902600 3.6.3.14,3.6.3.15 1.898e-211 676.0
LYD1_k127_556720_13 PFAM fumarate reductase succinate dehydrogenase flavoprotein K00239,K00244,K17363 - 1.3.5.1,1.3.5.4,1.3.99.33 2.933e-210 666.0
LYD1_k127_556720_14 PFAM Amidohydrolase 3 - - - 3.791e-194 619.0
LYD1_k127_556720_15 PFAM cytochrome bd ubiquinol oxidase subunit I K00425 - 1.10.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005584 604.0
LYD1_k127_556720_16 Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit K02118 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006515 603.0
LYD1_k127_556720_17 Iron-sulfur cluster-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002297 596.0
LYD1_k127_556720_18 hydrolase activity, hydrolyzing O-glycosyl compounds K00690 - 2.4.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 602.0
LYD1_k127_556720_19 PFAM glycoside hydrolase, family 1 K05350 - 3.2.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005543 587.0
LYD1_k127_556720_2 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1168.0
LYD1_k127_556720_20 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00520 - 1.16.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003017 587.0
LYD1_k127_556720_21 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004927 563.0
LYD1_k127_556720_22 PFAM Cytochrome C assembly protein K02198 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 561.0
LYD1_k127_556720_23 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007294 516.0
LYD1_k127_556720_24 Beta-ketoacyl synthase, C-terminal domain K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000274 506.0
LYD1_k127_556720_25 Clostripain family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 495.0
LYD1_k127_556720_26 PFAM cytochrome bd ubiquinol oxidase subunit II K00426 - 1.10.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001698 477.0
LYD1_k127_556720_27 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002399 449.0
LYD1_k127_556720_28 NAD dependent epimerase/dehydratase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007895 417.0
LYD1_k127_556720_29 PFAM Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002244 419.0
LYD1_k127_556720_3 PFAM aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.0 1009.0
LYD1_k127_556720_30 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003421 399.0
LYD1_k127_556720_31 lactate metabolic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004297 385.0
LYD1_k127_556720_32 PFAM PfkB domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008535 380.0
LYD1_k127_556720_33 GHMP kinases N terminal domain K01597 - 4.1.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000254 379.0
LYD1_k127_556720_34 PFAM Cobyrinic acid a,c-diamide synthase K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003905 376.0
LYD1_k127_556720_35 Lysin motif - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 375.0
LYD1_k127_556720_36 DinB superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002974 368.0
LYD1_k127_556720_37 peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009132 356.0
LYD1_k127_556720_38 V-type ATPase 116kDa subunit family K02123 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007304 363.0
LYD1_k127_556720_39 Proton-conducting membrane transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001572 333.0
LYD1_k127_556720_4 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 6.31e-310 960.0
LYD1_k127_556720_40 heterodisulfide reductase K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009552 323.0
LYD1_k127_556720_41 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002072 329.0
LYD1_k127_556720_42 PFAM Glycoside hydrolase, family 16 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 308.0
LYD1_k127_556720_43 Belongs to the ParB family K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004442 295.0
LYD1_k127_556720_44 Belongs to the UPF0758 family K03630 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002608 288.0
LYD1_k127_556720_45 SMART PDZ DHR GLGF domain protein K11749 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003065 285.0
LYD1_k127_556720_46 4Fe-4S dicluster domain K00125,K03646 - 1.17.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001631 278.0
LYD1_k127_556720_47 PFAM Ferredoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002087 271.0
LYD1_k127_556720_48 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002664 268.0
LYD1_k127_556720_49 electron transfer flavoprotein K03522,K22432 - 1.3.1.108 0.000000000000000000000000000000000000000000000000000000000000000000000000002391 267.0
LYD1_k127_556720_5 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 6.093e-295 913.0
LYD1_k127_556720_50 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.000000000000000000000000000000000000000000000000000000000000000000124 237.0
LYD1_k127_556720_52 PBS lyase HEAT domain protein repeat-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000009984 233.0
LYD1_k127_556720_53 Peptidase MA superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000002127 234.0
LYD1_k127_556720_54 PFAM methyl-viologen-reducing hydrogenase delta subunit - - - 0.000000000000000000000000000000000000000000000000000000000000002223 220.0
LYD1_k127_556720_55 exodeoxyribonuclease I activity - - - 0.000000000000000000000000000000000000000000000000000000000000006039 220.0
LYD1_k127_556720_56 phosphorelay signal transduction system K07670 - - 0.000000000000000000000000000000000000000000000000000000000000007928 223.0
LYD1_k127_556720_57 Probable molybdopterin binding domain - - - 0.00000000000000000000000000000000000000000000000000000000005328 211.0
LYD1_k127_556720_58 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000000000000000004234 209.0
LYD1_k127_556720_59 PhoQ Sensor - - - 0.000000000000000000000000000000000000000000000000000000009482 222.0
LYD1_k127_556720_6 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 2.451e-283 908.0
LYD1_k127_556720_60 PFAM RNA binding S1 domain protein - - - 0.000000000000000000000000000000000000000000000000000004776 199.0
LYD1_k127_556720_61 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000003264 190.0
LYD1_k127_556720_62 PFAM Auxin Efflux Carrier K07088 - - 0.000000000000000000000000000000000000000000000000001033 194.0
LYD1_k127_556720_63 PFAM Electron transfer flavoprotein K03521 - - 0.000000000000000000000000000000000000000000000000005005 190.0
LYD1_k127_556720_64 Acyl-CoA dehydrogenase, N-terminal domain - - - 0.000000000000000000000000000000000000000000000002353 188.0
LYD1_k127_556720_65 7 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase K00950,K13940 - 2.7.6.3,4.1.2.25 0.000000000000000000000000000000000000000000000006423 176.0
LYD1_k127_556720_66 Produces ATP from ADP in the presence of a proton gradient across the membrane K02120 - - 0.00000000000000000000000000000000000000000000001313 179.0
LYD1_k127_556720_67 Cytochrome c K17222 - - 0.00000000000000000000000000000000000000000000003484 179.0
LYD1_k127_556720_68 PFAM glycine cleavage T protein (aminomethyl transferase) K00605 - 2.1.2.10 0.00000000000000000000000000000000000000000000014 180.0
LYD1_k127_556720_69 - - - - 0.0000000000000000000000000000000000000000000007734 169.0
LYD1_k127_556720_7 Pyridine nucleotide-disulphide oxidoreductase K03388,K15022 - 1.17.1.10,1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 3.159e-263 838.0
LYD1_k127_556720_70 pilus organization K02674,K07004 - - 0.000000000000000000000000000000000000000000001 184.0
LYD1_k127_556720_71 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000000000000004463 169.0
LYD1_k127_556720_72 Protein of unknown function (DUF2652) - - - 0.000000000000000000000000000000000000000009528 160.0
LYD1_k127_556720_73 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K02199 - - 0.00000000000000000000000000000000000000002247 159.0
LYD1_k127_556720_74 4Fe-4S dicluster domain K03390 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000009107 156.0
LYD1_k127_556720_75 Rieske [2Fe-2S] domain K02636 - 1.10.9.1 0.0000000000000000000000000000000000000007906 154.0
LYD1_k127_556720_76 Cytochrome c - - - 0.000000000000000000000000000000000000009889 160.0
LYD1_k127_556720_77 Produces ATP from ADP in the presence of a proton gradient across the membrane K02119 - - 0.00000000000000000000000000000000000004858 156.0
LYD1_k127_556720_78 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein K00125 - 1.17.1.9 0.00000000000000000000000000000000003254 148.0
LYD1_k127_556720_79 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000001807 137.0
LYD1_k127_556720_8 ABC transporter CydDC cysteine exporter (CydDC-E) family permease ATP-binding protein CydD K16013 - - 1.433e-243 794.0
LYD1_k127_556720_80 Calx-beta domain - - - 0.00000000000000000000000000000004964 145.0
LYD1_k127_556720_81 subunit of a heme lyase K02200 - - 0.0000000000000000000000000000001812 129.0
LYD1_k127_556720_83 ECF sigma factor K03088 - - 0.000000000000000000000000000005055 126.0
LYD1_k127_556720_84 - - - - 0.0000000000000000000000000002402 119.0
LYD1_k127_556720_85 MerR, DNA binding - - - 0.0000000000000000000000000004343 119.0
LYD1_k127_556720_86 Uncharacterized ACR, COG1430 K09005 - - 0.00000000000000000000000000738 114.0
LYD1_k127_556720_87 Belongs to the small heat shock protein (HSP20) family - - - 0.00000000000000000000000001732 113.0
LYD1_k127_556720_89 nucleotidyltransferase domain K07075 - - 0.00000000000000000000000004885 109.0
LYD1_k127_556720_9 Selenocysteine-specific translation elongation factor K03833 - - 1.036e-241 762.0
LYD1_k127_556720_90 Protein of unknown function DUF86 - - - 0.0000000000000000000000001307 109.0
LYD1_k127_556720_91 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000004877 115.0
LYD1_k127_556720_92 - - - - 0.000000000000000000000000679 108.0
LYD1_k127_556720_93 Protein of unknown function with PCYCGC motif - - - 0.000000000000000000000002794 109.0
LYD1_k127_556720_94 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor K02275 - 1.9.3.1 0.00000000000000000000001987 105.0
LYD1_k127_556720_95 4Fe-4S dicluster domain K00125,K03646 - 1.17.1.9 0.00000000000000000000003184 104.0
LYD1_k127_556720_96 Belongs to the acylphosphatase family K01512 - 3.6.1.7 0.0000000000000000000004941 98.0
LYD1_k127_556720_97 ErfK ybiS ycfS ynhG family protein - - - 0.000000000000000000001909 103.0
LYD1_k127_556720_98 response regulator K03413,K07719 - - 0.000000000000000000002336 97.0
LYD1_k127_556720_99 Belongs to the peptidase S8 family K13276 - - 0.000000000000000000007071 109.0
LYD1_k127_5592351_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1447.0
LYD1_k127_5592351_1 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1298.0
LYD1_k127_5592351_10 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 5.901e-195 618.0
LYD1_k127_5592351_11 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 7.158e-194 612.0
LYD1_k127_5592351_12 PFAM UDP-glucose GDP-mannose dehydrogenase K02472 - 1.1.1.336 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 595.0
LYD1_k127_5592351_13 Belongs to the DegT DnrJ EryC1 family K13010 - 2.6.1.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002973 574.0
LYD1_k127_5592351_14 Pyruvate:ferredoxin oxidoreductase core domain II K00174 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008339 543.0
LYD1_k127_5592351_15 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009135 539.0
LYD1_k127_5592351_16 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008118 535.0
LYD1_k127_5592351_17 Penicillin-binding protein, dimerisation domain K03587 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004729 538.0
LYD1_k127_5592351_18 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003793 467.0
LYD1_k127_5592351_19 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004058 434.0
LYD1_k127_5592351_2 malic protein domain protein K00027,K00029 - 1.1.1.38,1.1.1.40 2.617e-301 941.0
LYD1_k127_5592351_20 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005785 422.0
LYD1_k127_5592351_21 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008327 415.0
LYD1_k127_5592351_22 Belongs to the MenA family. Type 1 subfamily K02548 - 2.5.1.74 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003236 411.0
LYD1_k127_5592351_23 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009772 393.0
LYD1_k127_5592351_24 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008384 393.0
LYD1_k127_5592351_25 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004606 381.0
LYD1_k127_5592351_26 ErfK ybiS ycfS ynhG family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007895 379.0
LYD1_k127_5592351_27 Peptidoglycan-binding domain 1 protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002592 350.0
LYD1_k127_5592351_28 PFAM deoxynucleoside kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002613 321.0
LYD1_k127_5592351_29 Cell wall formation K00075 - 1.3.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002835 325.0
LYD1_k127_5592351_3 PFAM glycoside hydrolase family 65 central catalytic - - - 2.575e-299 933.0
LYD1_k127_5592351_30 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 K01838 - 5.4.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002546 311.0
LYD1_k127_5592351_31 transferase activity, transferring glycosyl groups K21011,K21012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009515 315.0
LYD1_k127_5592351_32 Bacterial sugar transferase K19428 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 303.0
LYD1_k127_5592351_33 Transketolase, pyrimidine binding domain K00162,K21417 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006545 302.0
LYD1_k127_5592351_34 1-deoxy-D-xylulose-5-phosphate synthase K00161 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001798 289.0
LYD1_k127_5592351_35 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002008 291.0
LYD1_k127_5592351_36 Pyruvate ferredoxin/flavodoxin oxidoreductase K00172,K00177 - 1.2.7.1,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000006688 252.0
LYD1_k127_5592351_37 PFAM PDZ DHR GLGF domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005994 265.0
LYD1_k127_5592351_38 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.00000000000000000000000000000000000000000000000000000000000000000009132 233.0
LYD1_k127_5592351_39 TIGRFAM cell envelope-related function transcriptional attenuator, LytR CpsA family - - - 0.000000000000000000000000000000000000000000000000000000000000000004015 240.0
LYD1_k127_5592351_4 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 1.753e-288 915.0
LYD1_k127_5592351_40 Belongs to the SEDS family K03588 - - 0.0000000000000000000000000000000000000000000000000000000000000003888 236.0
LYD1_k127_5592351_41 polysaccharide deacetylase K01406 - 3.4.24.40 0.00000000000000000000000000000000000000000000000000000000000001745 231.0
LYD1_k127_5592351_42 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.00000000000000000000000000000000000000000000000000000000000001863 224.0
LYD1_k127_5592351_43 Cysteine-rich secretory protein family - - - 0.000000000000000000000000000000000000000000000000000000000001364 225.0
LYD1_k127_5592351_44 PFAM metallophosphoesterase K07098 - - 0.00000000000000000000000000000000000000000000000000000000001582 220.0
LYD1_k127_5592351_45 involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell - - - 0.0000000000000000000000000000000000000000000000000000000001034 219.0
LYD1_k127_5592351_46 beta-lactamase domain protein - - - 0.000000000000000000000000000000000000000000000000000000005494 205.0
LYD1_k127_5592351_47 Modulates RecA activity K03565 - - 0.000000000000000000000000000000000000000000000000009483 189.0
LYD1_k127_5592351_48 Nitroreductase family - - - 0.00000000000000000000000000000000000000000000000003977 184.0
LYD1_k127_5592351_49 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly K01921,K03589 GO:0000003,GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0007049,GO:0008150,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0019954,GO:0022402,GO:0022414,GO:0022607,GO:0031224,GO:0031226,GO:0032153,GO:0032505,GO:0032506,GO:0042802,GO:0043093,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0051301,GO:0061640,GO:0071840,GO:0071944,GO:0090529,GO:1902410,GO:1903047 6.3.2.4 0.00000000000000000000000000000000000000000001305 177.0
LYD1_k127_5592351_5 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01007 - 2.7.9.2 2.73e-259 827.0
LYD1_k127_5592351_50 LysM domain - - - 0.00000000000000000000000000000000000000000002648 172.0
LYD1_k127_5592351_52 serine acetyltransferase K00640 - 2.3.1.30 0.000000000000000000000000000000000000000006138 160.0
LYD1_k127_5592351_53 Belongs to the MraZ family K03925 - - 0.000000000000000000000000000000002043 134.0
LYD1_k127_5592351_54 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00176 - 1.2.7.3 0.0000000000000000000000000001866 116.0
LYD1_k127_5592351_55 TfoX N-terminal domain - - - 0.0000000000000000000000000002957 117.0
LYD1_k127_5592351_56 PFAM Phosphoglycerate mutase family K02226 - 3.1.3.73 0.00000000000000000000001422 108.0
LYD1_k127_5592351_57 Histidine kinase K10681 - 2.7.13.3 0.0000000000000000000001568 111.0
LYD1_k127_5592351_6 Pyridine nucleotide-disulphide oxidoreductase dimerisation region K00382 - 1.8.1.4 4.338e-227 711.0
LYD1_k127_5592351_7 Endoribonuclease that initiates mRNA decay K18682 - - 4.359e-215 678.0
LYD1_k127_5592351_8 Beta-eliminating lyase - - - 2.458e-206 650.0
LYD1_k127_5592351_9 Aminotransferase class-V - - - 4.875e-206 651.0
LYD1_k127_5634682_0 Glutamate synthase central domain K00265 - 1.4.1.13,1.4.1.14 0.0 1481.0
LYD1_k127_5634682_1 Multicopper oxidase - - - 0.0 1475.0
LYD1_k127_5634682_10 Cellulase (glycosyl hydrolase family 5) K19355 - 3.2.1.78 2.888e-228 725.0
LYD1_k127_5634682_100 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.00000000000000000000000000000000000000000000001599 199.0
LYD1_k127_5634682_101 stage II sporulation K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000189 180.0
LYD1_k127_5634682_102 Methyltransferase - - - 0.000000000000000000000000000000000000000000001631 185.0
LYD1_k127_5634682_103 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000000003739 163.0
LYD1_k127_5634682_104 MarR family - - - 0.00000000000000000000000000000000000000005406 156.0
LYD1_k127_5634682_105 - - - - 0.000000000000000000000000000000000000001291 161.0
LYD1_k127_5634682_106 Redoxin - - - 0.00000000000000000000000000000000000001493 146.0
LYD1_k127_5634682_107 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.00000000000000000000000000000000000001509 147.0
LYD1_k127_5634682_108 Stage II sporulation E family protein - - - 0.00000000000000000000000000000000000001868 148.0
LYD1_k127_5634682_109 ABC-type sugar transport system, periplasmic component K02027 - - 0.00000000000000000000000000000000000004089 161.0
LYD1_k127_5634682_11 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH K00033 - 1.1.1.343,1.1.1.44 4.939e-227 711.0
LYD1_k127_5634682_110 A domain in the BMP inhibitor chordin and in microbial proteins. - - - 0.00000000000000000000000000000000008267 144.0
LYD1_k127_5634682_111 - - - - 0.0000000000000000000000000000000003034 147.0
LYD1_k127_5634682_112 PFAM Sulfate transporter antisigma-factor antagonist STAS - - - 0.0000000000000000000000000000000009139 133.0
LYD1_k127_5634682_113 Methyltransferase type 11 K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000009091 145.0
LYD1_k127_5634682_114 Asp Glu Hydantoin racemase - - - 0.0000000000000000000000000000008658 132.0
LYD1_k127_5634682_115 SnoaL-like polyketide cyclase - - - 0.00000000000000000000000000001596 123.0
LYD1_k127_5634682_117 antisigma factor binding K04749 - - 0.00000000000000000000000002656 112.0
LYD1_k127_5634682_118 copG family - - - 0.00000000000000000000000002958 110.0
LYD1_k127_5634682_119 Phospholipid methyltransferase - - - 0.00000000000000000000000009633 115.0
LYD1_k127_5634682_12 pyruvate phosphate dikinase, PEP K01007 - 2.7.9.2 2.662e-223 721.0
LYD1_k127_5634682_120 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000005928 105.0
LYD1_k127_5634682_121 Creatinine amidohydrolase - - - 0.000000000000000000000008995 112.0
LYD1_k127_5634682_122 histone H2A K63-linked ubiquitination - - - 0.00000000000000000000001855 108.0
LYD1_k127_5634682_123 4Fe-4S dicluster domain - - - 0.00000000000000000003524 96.0
LYD1_k127_5634682_124 Protein of unknown function (DUF429) - - - 0.00000000000000000004455 99.0
LYD1_k127_5634682_125 bacterial-type flagellum-dependent cell motility - - - 0.00000000000000000009226 106.0
LYD1_k127_5634682_126 Domain of unknown function (DUF362) - - - 0.00000000000000000009616 102.0
LYD1_k127_5634682_127 acetyltransferase - - - 0.0000000000000004927 84.0
LYD1_k127_5634682_128 Alpha beta hydrolase - - - 0.00000000000001875 78.0
LYD1_k127_5634682_129 Phage integrase, N-terminal SAM-like domain - - - 0.00000000000009402 77.0
LYD1_k127_5634682_13 Glucuronate isomerase K01812 - 5.3.1.12 1.318e-213 672.0
LYD1_k127_5634682_130 ThiS family K03636 - - 0.000000000006371 69.0
LYD1_k127_5634682_131 Tetratricopeptide repeat - - - 0.00000000003477 74.0
LYD1_k127_5634682_132 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000005993 64.0
LYD1_k127_5634682_133 23S rRNA-intervening sequence protein - - - 0.0000000001133 68.0
LYD1_k127_5634682_135 adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.000000005031 60.0
LYD1_k127_5634682_136 peroxiredoxin activity K03386,K03564,K16922 - 1.11.1.15 0.0000002247 53.0
LYD1_k127_5634682_137 transposase activity K07483 - - 0.000001239 52.0
LYD1_k127_5634682_138 Teneurin transmembrane protein 4 - GO:0000003,GO:0000226,GO:0000902,GO:0000904,GO:0001654,GO:0001702,GO:0001708,GO:0001745,GO:0001751,GO:0001754,GO:0001941,GO:0003006,GO:0003008,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005856,GO:0005886,GO:0005887,GO:0005938,GO:0006928,GO:0006935,GO:0006996,GO:0007010,GO:0007017,GO:0007154,GO:0007155,GO:0007156,GO:0007157,GO:0007267,GO:0007268,GO:0007272,GO:0007274,GO:0007275,GO:0007276,GO:0007369,GO:0007399,GO:0007409,GO:0007411,GO:0007413,GO:0007416,GO:0007417,GO:0007420,GO:0007423,GO:0007507,GO:0007528,GO:0007548,GO:0007588,GO:0008037,GO:0008038,GO:0008039,GO:0008045,GO:0008092,GO:0008150,GO:0008283,GO:0008366,GO:0008406,GO:0008584,GO:0008585,GO:0009605,GO:0009653,GO:0009790,GO:0009791,GO:0009792,GO:0009886,GO:0009887,GO:0009888,GO:0009987,GO:0010001,GO:0010171,GO:0010172,GO:0010256,GO:0010470,GO:0010720,GO:0010927,GO:0010975,GO:0010976,GO:0014003,GO:0014013,GO:0014015,GO:0014706,GO:0014855,GO:0016020,GO:0016021,GO:0016043,GO:0016200,GO:0016477,GO:0019953,GO:0021782,GO:0022008,GO:0022010,GO:0022407,GO:0022409,GO:0022414,GO:0022416,GO:0022603,GO:0022607,GO:0022610,GO:0023052,GO:0030030,GO:0030154,GO:0030155,GO:0030182,GO:0030198,GO:0030421,GO:0030863,GO:0031005,GO:0031012,GO:0031122,GO:0031175,GO:0031224,GO:0031226,GO:0031344,GO:0031346,GO:0031594,GO:0031641,GO:0031643,GO:0031644,GO:0031646,GO:0032288,GO:0032289,GO:0032291,GO:0032501,GO:0032502,GO:0032504,GO:0032989,GO:0032990,GO:0033002,GO:0034110,GO:0034114,GO:0034116,GO:0035051,GO:0035265,GO:0035295,GO:0036477,GO:0040007,GO:0040011,GO:0040012,GO:0040017,GO:0040019,GO:0040032,GO:0040039,GO:0042051,GO:0042063,GO:0042221,GO:0042330,GO:0042461,GO:0042462,GO:0042552,GO:0042734,GO:0042802,GO:0042803,GO:0042995,GO:0043005,GO:0043025,GO:0043062,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043954,GO:0044057,GO:0044085,GO:0044297,GO:0044421,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044456,GO:0044459,GO:0044464,GO:0044703,GO:0045137,GO:0045165,GO:0045202,GO:0045211,GO:0045466,GO:0045467,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045685,GO:0045687,GO:0045785,GO:0045995,GO:0046530,GO:0046545,GO:0046546,GO:0046660,GO:0046661,GO:0046982,GO:0046983,GO:0048036,GO:0048058,GO:0048468,GO:0048499,GO:0048513,GO:0048518,GO:0048522,GO:0048563,GO:0048565,GO:0048569,GO:0048589,GO:0048592,GO:0048598,GO:0048608,GO:0048609,GO:0048646,GO:0048666,GO:0048667,GO:0048699,GO:0048709,GO:0048713,GO:0048714,GO:0048731,GO:0048738,GO:0048749,GO:0048786,GO:0048788,GO:0048790,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0050803,GO:0050807,GO:0050808,GO:0050839,GO:0050896,GO:0050918,GO:0051094,GO:0051124,GO:0051128,GO:0051130,GO:0051179,GO:0051239,GO:0051240,GO:0051674,GO:0051704,GO:0051960,GO:0051962,GO:0055017,GO:0055123,GO:0060038,GO:0060284,GO:0060322,GO:0060419,GO:0060465,GO:0060537,GO:0060911,GO:0060912,GO:0061024,GO:0061458,GO:0061564,GO:0065007,GO:0065008,GO:0070831,GO:0071711,GO:0071840,GO:0071944,GO:0072359,GO:0090596,GO:0097060,GO:0097090,GO:0097435,GO:0097458,GO:0097485,GO:0098590,GO:0098609,GO:0098742,GO:0098793,GO:0098794,GO:0098831,GO:0098916,GO:0099173,GO:0099174,GO:0099536,GO:0099537,GO:0099558,GO:0099568,GO:0099569,GO:0099738,GO:0106030,GO:0120025,GO:0120035,GO:0120036,GO:0120039,GO:1990709,GO:2000026,GO:2000331,GO:2000543,GO:2001197 - 0.000004567 62.0
LYD1_k127_5634682_139 Glucose sorbosone - - - 0.000007301 60.0
LYD1_k127_5634682_14 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 4.34e-212 668.0
LYD1_k127_5634682_140 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00006442 54.0
LYD1_k127_5634682_141 Prolyl oligopeptidase family - - - 0.0001523 54.0
LYD1_k127_5634682_142 peptidyl-tyrosine sulfation - - - 0.0002252 54.0
LYD1_k127_5634682_143 tetratricopeptide repeat - - - 0.0004918 50.0
LYD1_k127_5634682_15 Belongs to the rhamnose isomerase family K01813 - 5.3.1.14 1.067e-211 663.0
LYD1_k127_5634682_16 Domain of unknown function (DUF4070) - - - 7.348e-208 657.0
LYD1_k127_5634682_17 Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001754 621.0
LYD1_k127_5634682_18 NAD(P)-binding Rossmann-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003222 613.0
LYD1_k127_5634682_19 PFAM ABC transporter transmembrane region K11085 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004291 604.0
LYD1_k127_5634682_2 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1330.0
LYD1_k127_5634682_20 PFAM Mandelate racemase muconate lactonizing enzyme, N-terminal domain protein K01684 - 4.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003919 586.0
LYD1_k127_5634682_21 PFAM amidohydrolase K01468 - 3.5.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000636 561.0
LYD1_k127_5634682_22 lactate racemase activity K22373 - 5.1.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 522.0
LYD1_k127_5634682_23 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002361 517.0
LYD1_k127_5634682_24 Belongs to the N(4) N(6)-methyltransferase family K00571,K13581 - 2.1.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003163 509.0
LYD1_k127_5634682_25 introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX K03404,K03405 - 6.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008944 504.0
LYD1_k127_5634682_26 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003187 500.0
LYD1_k127_5634682_27 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007286 512.0
LYD1_k127_5634682_28 Domain of unknown function (DUF4432) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 481.0
LYD1_k127_5634682_29 Coenzyme A transferase K01039 - 2.8.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002848 477.0
LYD1_k127_5634682_3 Cytochrome b/b6/petB - - - 6.774e-321 1009.0
LYD1_k127_5634682_30 D-galactarate dehydratase / Altronate hydrolase, C terminus K01685,K01708 - 4.2.1.42,4.2.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002223 482.0
LYD1_k127_5634682_31 Helicase conserved C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008384 480.0
LYD1_k127_5634682_32 carboxylic acid catabolic process K01684 - 4.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009202 458.0
LYD1_k127_5634682_33 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002628 464.0
LYD1_k127_5634682_34 Domain of unknown function (DUF2088) K22373 - 5.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004391 442.0
LYD1_k127_5634682_35 VWA domain containing CoxE-like protein K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002735 436.0
LYD1_k127_5634682_36 PFAM peptidase M1, membrane alanine aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000067 439.0
LYD1_k127_5634682_37 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005844 433.0
LYD1_k127_5634682_38 Stage II sporulation E family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009271 428.0
LYD1_k127_5634682_39 Coenzyme A transferase K01040 - 2.8.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007642 409.0
LYD1_k127_5634682_4 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 9.714e-297 932.0
LYD1_k127_5634682_40 RHS Repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 458.0
LYD1_k127_5634682_41 von Willebrand factor (vWF) type A domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005954 402.0
LYD1_k127_5634682_42 PFAM aminotransferase class V - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002143 398.0
LYD1_k127_5634682_43 PFAM aldo keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006057 391.0
LYD1_k127_5634682_44 tagaturonate epimerase K21619 - 5.1.2.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000224 397.0
LYD1_k127_5634682_45 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 385.0
LYD1_k127_5634682_46 Sulphur transport K07112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000626 384.0
LYD1_k127_5634682_47 Uroporphyrinogen decarboxylase (URO-D) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005802 372.0
LYD1_k127_5634682_48 pfkB family carbohydrate kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 368.0
LYD1_k127_5634682_49 PBP superfamily domain K05772 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001889 359.0
LYD1_k127_5634682_5 Dehydratase family K22396 - 4.2.1.82 8.283e-287 895.0
LYD1_k127_5634682_50 PFAM binding-protein-dependent transport systems inner membrane component K02025,K05814,K10118,K10237,K10241,K15771,K17235,K17316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006149 349.0
LYD1_k127_5634682_51 Amidase K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004124 357.0
LYD1_k127_5634682_52 ribonuclease inhibitor activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009546 340.0
LYD1_k127_5634682_53 Fumarylacetoacetate (FAA) hydrolase family K14259 - 4.2.1.141 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 339.0
LYD1_k127_5634682_54 Uroporphyrinogen decarboxylase (URO-D) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004003 342.0
LYD1_k127_5634682_55 PFAM diacylglycerol kinase catalytic region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003581 333.0
LYD1_k127_5634682_56 galactokinase activity K00849 - 2.7.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003618 336.0
LYD1_k127_5634682_57 Short-chain dehydrogenase reductase sdr K00065 - 1.1.1.127 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 324.0
LYD1_k127_5634682_58 Bacterial transcriptional activator domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007509 353.0
LYD1_k127_5634682_59 Transketolase, pyridine binding domain protein K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 327.0
LYD1_k127_5634682_6 Belongs to the aldehyde dehydrogenase family K00294 - 1.2.1.88 2.482e-267 829.0
LYD1_k127_5634682_60 Short-chain dehydrogenase reductase SDR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 320.0
LYD1_k127_5634682_61 PFAM Transketolase K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003414 323.0
LYD1_k127_5634682_62 PFAM binding-protein-dependent transport systems inner membrane component K02026,K05815 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006189 308.0
LYD1_k127_5634682_63 Uroporphyrinogen decarboxylase (URO-D) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005501 307.0
LYD1_k127_5634682_64 PA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002862 299.0
LYD1_k127_5634682_65 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004869 282.0
LYD1_k127_5634682_66 Response regulator, receiver K02487,K03407,K03413,K06596,K11526,K13490 GO:0003674,GO:0005488,GO:0005515,GO:0019904 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000914 280.0
LYD1_k127_5634682_67 transferase activity, transferring acyl groups K15520 - 2.3.1.189 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003496 284.0
LYD1_k127_5634682_68 Two component transcriptional regulator, LuxR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000146 274.0
LYD1_k127_5634682_69 Binding-protein-dependent transport system inner membrane component K05773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007265 266.0
LYD1_k127_5634682_7 Transcriptional activator domain - - - 3.797e-248 798.0
LYD1_k127_5634682_70 Multicopper oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000312 266.0
LYD1_k127_5634682_71 Sulphur transport K07112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009967 249.0
LYD1_k127_5634682_72 Serine Threonine protein kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000084 269.0
LYD1_k127_5634682_73 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000008798 252.0
LYD1_k127_5634682_74 PFAM metal-dependent phosphohydrolase, HD sub domain K06950 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002231 244.0
LYD1_k127_5634682_75 PFAM Inositol monophosphatase K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000006708 245.0
LYD1_k127_5634682_76 Sulfatase-modifying factor enzyme 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000001811 261.0
LYD1_k127_5634682_77 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000000004567 240.0
LYD1_k127_5634682_78 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000008571 239.0
LYD1_k127_5634682_79 PhoQ Sensor - - - 0.00000000000000000000000000000000000000000000000000000000000000000003993 254.0
LYD1_k127_5634682_8 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 2.416e-241 753.0
LYD1_k127_5634682_81 PFAM Rhomboid family K19225 - 3.4.21.105 0.0000000000000000000000000000000000000000000000000000000000000005332 226.0
LYD1_k127_5634682_82 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000001007 226.0
LYD1_k127_5634682_83 PFAM Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.00000000000000000000000000000000000000000000000000000000000003238 227.0
LYD1_k127_5634682_84 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000004347 231.0
LYD1_k127_5634682_85 PFAM ABC transporter K06857 - 3.6.3.55 0.00000000000000000000000000000000000000000000000000000000000004802 230.0
LYD1_k127_5634682_86 PFAM Class II aldolase K01628 - 4.1.2.17 0.00000000000000000000000000000000000000000000000000000000000008879 219.0
LYD1_k127_5634682_87 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000005505 221.0
LYD1_k127_5634682_88 Leucine carboxyl methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000007766 216.0
LYD1_k127_5634682_89 histidine kinase, dimerisation and phosphoacceptor region - - - 0.00000000000000000000000000000000000000000000000000000000774 226.0
LYD1_k127_5634682_9 RHS Repeat - - - 1.043e-237 805.0
LYD1_k127_5634682_90 CAAX protease self-immunity K07052 - - 0.000000000000000000000000000000000000000000000000000000008737 209.0
LYD1_k127_5634682_91 Xylose isomerase-like TIM barrel K22233 - - 0.00000000000000000000000000000000000000000000000000000001015 208.0
LYD1_k127_5634682_92 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000003996 212.0
LYD1_k127_5634682_93 Multicopper oxidase - - - 0.0000000000000000000000000000000000000000000000000002778 194.0
LYD1_k127_5634682_94 TIGRFAM molybdenum cofactor synthesis domain K03750,K07219 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000003069 197.0
LYD1_k127_5634682_95 pyridoxamine 5'-phosphate K07005 - - 0.0000000000000000000000000000000000000000000000000003695 192.0
LYD1_k127_5634682_96 Transposase - - - 0.00000000000000000000000000000000000000000000000000174 189.0
LYD1_k127_5634682_97 - - - - 0.00000000000000000000000000000000000000000000000001047 192.0
LYD1_k127_5634682_98 GAF domain K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000000000000000000002081 202.0
LYD1_k127_5634682_99 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000001704 179.0
LYD1_k127_5636655_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000374 476.0
LYD1_k127_5636655_1 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003708 381.0
LYD1_k127_5696252_0 PFAM UvrD REP helicase K03657 - 3.6.4.12 8.208e-280 881.0
LYD1_k127_5696252_1 Family 4 glycosyl hydrolase K07406 - 3.2.1.22 1.458e-255 792.0
LYD1_k127_5696252_10 teichoic acid transport K01990,K09689,K09691 - 3.6.3.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 586.0
LYD1_k127_5696252_11 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004453 569.0
LYD1_k127_5696252_12 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003425 566.0
LYD1_k127_5696252_13 metallopeptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005142 563.0
LYD1_k127_5696252_14 3-deoxy-manno-octulosonate-8-phosphatase activity K00983,K03270 - 2.7.7.43,3.1.3.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000309 540.0
LYD1_k127_5696252_15 SAF K01654 - 2.5.1.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000048 533.0
LYD1_k127_5696252_16 NmrA-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001466 529.0
LYD1_k127_5696252_17 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791 - 5.1.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001577 533.0
LYD1_k127_5696252_18 Glycoside hydrolase family 16 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001977 553.0
LYD1_k127_5696252_19 4-phosphoerythronate dehydrogenase activity K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004221 475.0
LYD1_k127_5696252_2 Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC - - - 2.453e-233 729.0
LYD1_k127_5696252_20 inositol 2-dehydrogenase activity K18431 - 2.7.7.82 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002094 452.0
LYD1_k127_5696252_21 NeuB family K01654 - 2.5.1.56 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005421 449.0
LYD1_k127_5696252_22 PFAM Nucleotidyl transferase K00973 - 2.7.7.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006687 444.0
LYD1_k127_5696252_23 Short-chain dehydrogenase reductase SDR K08679 - 5.1.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 424.0
LYD1_k127_5696252_24 PhoQ Sensor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001663 433.0
LYD1_k127_5696252_25 Aspartate ammonia-lyase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 423.0
LYD1_k127_5696252_26 PFAM glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006683 398.0
LYD1_k127_5696252_27 Enoyl-(Acyl carrier protein) reductase K00065 - 1.1.1.127 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 392.0
LYD1_k127_5696252_28 PhoQ Sensor K07682 GO:0000166,GO:0000287,GO:0001666,GO:0003032,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0005488,GO:0005509,GO:0005524,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0009593,GO:0009628,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0017076,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0019825,GO:0019826,GO:0020037,GO:0030312,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0036211,GO:0036293,GO:0040007,GO:0042165,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0046777,GO:0046872,GO:0046906,GO:0048037,GO:0050896,GO:0051606,GO:0051775,GO:0051776,GO:0070025,GO:0070026,GO:0070482,GO:0070483,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007549 407.0
LYD1_k127_5696252_29 3-demethylubiquinone-9 3-methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005055 380.0
LYD1_k127_5696252_3 Putative modulator of DNA gyrase K03568 - - 2.036e-224 704.0
LYD1_k127_5696252_30 Protein of unknown function DUF115 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001742 376.0
LYD1_k127_5696252_31 translation release factor activity K03265 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000882 374.0
LYD1_k127_5696252_32 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003544 369.0
LYD1_k127_5696252_33 PFAM glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004669 376.0
LYD1_k127_5696252_34 PFAM short-chain dehydrogenase reductase SDR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003617 364.0
LYD1_k127_5696252_35 L-asparaginase II K01424 - 3.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000239 350.0
LYD1_k127_5696252_36 Heat shock protein DnaJ domain protein K05516 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003659 344.0
LYD1_k127_5696252_37 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001718 329.0
LYD1_k127_5696252_38 DNA polymerase III, delta prime subunit K02341 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007146 327.0
LYD1_k127_5696252_39 Phosphotransferase enzyme family K18844 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 326.0
LYD1_k127_5696252_4 His Kinase A (phosphoacceptor) domain - - - 1.344e-213 681.0
LYD1_k127_5696252_40 Glycosyl transferase, family 2 K00786 GO:0003674,GO:0003824,GO:0016740,GO:0016757 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001493 325.0
LYD1_k127_5696252_41 cytidylyl-transferase K00983 - 2.7.7.43 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000258 317.0
LYD1_k127_5696252_42 ABC-2 type transporter K09690 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003501 314.0
LYD1_k127_5696252_43 Glycosyl transferase, family 2 K20444 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005902 314.0
LYD1_k127_5696252_44 polysaccharide biosynthetic process K16694 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000327 319.0
LYD1_k127_5696252_45 Protein of unknown function (DUF4256) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 301.0
LYD1_k127_5696252_46 FES K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 298.0
LYD1_k127_5696252_47 PFAM NAD-dependent epimerase dehydratase K00067 - 1.1.1.133 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001916 302.0
LYD1_k127_5696252_48 TIGRFAM phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005737 292.0
LYD1_k127_5696252_49 Cytochrome b(N-terminal)/b6/petB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002748 289.0
LYD1_k127_5696252_5 PFAM UDP-glucose GDP-mannose dehydrogenase K13015 - 1.1.1.136 1.328e-206 649.0
LYD1_k127_5696252_50 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 289.0
LYD1_k127_5696252_51 Cytidylyltransferase K07257 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002413 282.0
LYD1_k127_5696252_52 Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006628 283.0
LYD1_k127_5696252_53 PFAM sigma-70 region 2 domain protein K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001541 281.0
LYD1_k127_5696252_54 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 - 5.1.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000009467 246.0
LYD1_k127_5696252_55 PFAM peptidase M22 glycoprotease K14742 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001961 244.0
LYD1_k127_5696252_56 Acyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000004392 249.0
LYD1_k127_5696252_58 - - - - 0.00000000000000000000000000000000000000000000000000000000000000008774 240.0
LYD1_k127_5696252_59 Transcriptional regulatory protein, C terminal K07667 - - 0.00000000000000000000000000000000000000000000000000000000001335 214.0
LYD1_k127_5696252_6 UDP-N-acetylglucosamine 2-epimerase activity - - - 4.382e-195 619.0
LYD1_k127_5696252_60 - - - - 0.0000000000000000000000000000000000000000000000000000000001519 211.0
LYD1_k127_5696252_61 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000002541 207.0
LYD1_k127_5696252_62 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.000000000000000000000000000000000000000000000000000000034 200.0
LYD1_k127_5696252_63 Hexapeptide repeat of succinyl-transferase - - - 0.00000000000000000000000000000000000000000000000000000005951 207.0
LYD1_k127_5696252_64 COGs COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000002885 196.0
LYD1_k127_5696252_65 guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000004612 188.0
LYD1_k127_5696252_66 Uncharacterized protein conserved in bacteria (DUF2255) - - - 0.000000000000000000000000000000000000000000000004731 175.0
LYD1_k127_5696252_67 Male sterility protein K21793 - - 0.000000000000000000000000000000000000000000008776 175.0
LYD1_k127_5696252_68 Ribosomal-protein-alanine acetyltransferase K03789 - 2.3.1.128 0.0000000000000000000000000000000000000000000162 171.0
LYD1_k127_5696252_69 FMN binding - - - 0.0000000000000000000000000000000000002957 146.0
LYD1_k127_5696252_7 lipid-A-disaccharide synthase activity K00748 - 2.4.1.182 7.415e-195 621.0
LYD1_k127_5696252_70 oxidoreductase activity, acting on diphenols and related substances as donors K02636 - 1.10.9.1 0.000000000000000000000000000000000002713 144.0
LYD1_k127_5696252_71 Cytochrome b(C-terminal)/b6/petD - - - 0.000000000000000000000000000000000004523 146.0
LYD1_k127_5696252_72 CAAX protease self-immunity K07052 - - 0.00000000000000000000000000000001039 138.0
LYD1_k127_5696252_73 PFAM Cytochrome c, class I K03889 - - 0.0000000000000000000000000005451 122.0
LYD1_k127_5696252_74 -O-antigen - - - 0.000000000000000000007544 97.0
LYD1_k127_5696252_75 Winged helix-turn-helix DNA-binding - - - 0.00000000000000000002378 96.0
LYD1_k127_5696252_76 2'-5' RNA ligase superfamily - - - 0.000000000001096 77.0
LYD1_k127_5696252_77 Copper binding proteins, plastocyanin/azurin family - - - 0.000000003289 63.0
LYD1_k127_5696252_78 translation initiation factor activity - - - 0.000001503 55.0
LYD1_k127_5696252_79 PFAM Rubrerythrin - - - 0.000002731 53.0
LYD1_k127_5696252_8 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K03388,K12527 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6,1.97.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004568 616.0
LYD1_k127_5696252_80 NapC/NirT cytochrome c family, N-terminal region - - - 0.000005564 56.0
LYD1_k127_5696252_81 UDP-N-acetylglucosamine 2-epimerase activity - - - 0.0001109 47.0
LYD1_k127_5696252_9 HD domain K07814 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005022 627.0
LYD1_k127_5697543_0 glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich K01190 - 3.2.1.23 0.0 1111.0
LYD1_k127_5697543_1 Transcriptional regulator K02529,K07506 - - 8.137e-313 998.0
LYD1_k127_5697543_10 PFAM ABC transporter related K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005064 473.0
LYD1_k127_5697543_11 PFAM Glycoside hydrolase family 42 domain protein K12308 - 3.2.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002741 475.0
LYD1_k127_5697543_12 Domain of unknown function (DUF3520) K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004176 471.0
LYD1_k127_5697543_13 Galactose-1-phosphate uridyl transferase, C-terminal domain K00965 - 2.7.7.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003265 449.0
LYD1_k127_5697543_14 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000526 432.0
LYD1_k127_5697543_15 Uroporphyrinogen decarboxylase (URO-D) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 427.0
LYD1_k127_5697543_16 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004909 422.0
LYD1_k127_5697543_17 TIGRFAM oligopeptide dipeptide ABC transporter, ATPase subunit K02031 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 407.0
LYD1_k127_5697543_18 FtsX-like permease family K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006508 429.0
LYD1_k127_5697543_19 Catalyzes the fromation of N-acetyl-D-glucosamine and N-acetyl-D-glucosamine-6-phosphate from diacetylchitobiose-6-phosphate K01222 - 3.2.1.86 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002916 405.0
LYD1_k127_5697543_2 beta-galactosidase K12111 - 3.2.1.23 2.43e-285 909.0
LYD1_k127_5697543_20 Histidinol-phosphate aminotransferase, chloroplast precursor K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000029 396.0
LYD1_k127_5697543_21 PFAM ABC-2 type transporter K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 387.0
LYD1_k127_5697543_22 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003776 391.0
LYD1_k127_5697543_23 histidinol dehydrogenase activity K00013,K14152 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0004635,GO:0004636,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009314,GO:0009411,GO:0009416,GO:0009507,GO:0009532,GO:0009536,GO:0009555,GO:0009570,GO:0009628,GO:0009987,GO:0016053,GO:0016462,GO:0016491,GO:0016614,GO:0016616,GO:0016787,GO:0016810,GO:0016814,GO:0016817,GO:0016818,GO:0018130,GO:0019238,GO:0019438,GO:0019752,GO:0030145,GO:0032501,GO:0032502,GO:0034641,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0046914,GO:0048229,GO:0048856,GO:0050896,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23,3.5.4.19,3.6.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005939 390.0
LYD1_k127_5697543_24 PFAM Binding-protein-dependent transport system inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002469 368.0
LYD1_k127_5697543_25 PFAM Type I restriction modification DNA specificity domain K01154 - 3.1.21.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003339 366.0
LYD1_k127_5697543_26 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000935 352.0
LYD1_k127_5697543_27 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002418 351.0
LYD1_k127_5697543_28 PFAM ABC-2 type transporter K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009984 335.0
LYD1_k127_5697543_29 4Fe-4S single cluster domain K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000174 336.0
LYD1_k127_5697543_3 Glycogen debranching enzyme - - - 2.604e-282 889.0
LYD1_k127_5697543_30 PFAM extracellular solute-binding protein, family 5 K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 345.0
LYD1_k127_5697543_31 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 292.0
LYD1_k127_5697543_32 PFAM peptidase S1 and S6, chymotrypsin Hap K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000024 297.0
LYD1_k127_5697543_33 PFAM peptidase S1 and S6, chymotrypsin Hap K08070 - 1.3.1.74 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001559 276.0
LYD1_k127_5697543_34 imidazoleglycerol-phosphate dehydratase K01693 GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008668 270.0
LYD1_k127_5697543_35 Nodulation protein S (NodS) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001144 273.0
LYD1_k127_5697543_36 cobalamin binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001766 263.0
LYD1_k127_5697543_37 Methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009118 248.0
LYD1_k127_5697543_38 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.0000000000000000000000000000000000000000000000000000000000000004432 228.0
LYD1_k127_5697543_39 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.000000000000000000000000000000000000000000000000000000000006558 217.0
LYD1_k127_5697543_4 Pyruvate formate lyase-like - - - 1.39e-262 829.0
LYD1_k127_5697543_40 mRNA catabolic process K06950 - - 0.00000000000000000000000000000000000000000000000000004296 195.0
LYD1_k127_5697543_41 radical SAM domain protein - - - 0.000000000000000000000000000000000000000000001456 176.0
LYD1_k127_5697543_42 PFAM S23 ribosomal protein - - - 0.000000000000000000000000000000000000000004454 157.0
LYD1_k127_5697543_43 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496,K11755 - 3.5.4.19,3.6.1.31 0.00000000000000000000000000000000000001436 147.0
LYD1_k127_5697543_44 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000001907 132.0
LYD1_k127_5697543_45 Helix-turn-helix domain - - - 0.000000000000000000000000002349 113.0
LYD1_k127_5697543_46 Phosphoribosyl-ATP pyrophosphohydrolase K01523 - 3.6.1.31 0.0000000000000000000000000143 111.0
LYD1_k127_5697543_47 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07025 - - 0.0000000000000000000000000211 118.0
LYD1_k127_5697543_49 exo-alpha-(2->6)-sialidase activity K01186 GO:0001573,GO:0003674,GO:0003824,GO:0004308,GO:0004553,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006629,GO:0006643,GO:0006664,GO:0006665,GO:0006672,GO:0006687,GO:0006689,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009311,GO:0009313,GO:0009987,GO:0016020,GO:0016042,GO:0016052,GO:0016787,GO:0016798,GO:0016997,GO:0019377,GO:0030149,GO:0034641,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043603,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044424,GO:0044464,GO:0046466,GO:0046479,GO:0046514,GO:0071704,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575,GO:1903509 3.2.1.18 0.0000000000000000007015 102.0
LYD1_k127_5697543_5 HsdM N-terminal domain K03427 - 2.1.1.72 8.973e-230 725.0
LYD1_k127_5697543_50 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K18917 - 1.20.4.3 0.000000000000000000948 88.0
LYD1_k127_5697543_51 exo-alpha-(2->6)-sialidase activity - - - 0.000000000000000001609 101.0
LYD1_k127_5697543_52 - - - - 0.00000000000000003073 88.0
LYD1_k127_5697543_53 Uncharacterized conserved protein (DUF2277) - - - 0.00000000000000004049 83.0
LYD1_k127_5697543_54 Transposase IS200 like - - - 0.00000000000000006384 83.0
LYD1_k127_5697543_55 PhoQ Sensor K13924 - 2.1.1.80,3.1.1.61 0.0000000006938 64.0
LYD1_k127_5697543_56 Domain of unknown function (DUF4349) - - - 0.000001165 58.0
LYD1_k127_5697543_6 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002606 596.0
LYD1_k127_5697543_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005151 588.0
LYD1_k127_5697543_8 alpha-galactosidase K07407 - 3.2.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 513.0
LYD1_k127_5697543_9 TIGRFAM oligopeptide dipeptide ABC transporter, ATPase subunit K02032,K10823 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006356 484.0
LYD1_k127_5748282_0 ATPase associated with various cellular activities, AAA_5 K03696 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004269 239.0
LYD1_k127_5748282_1 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000004489 229.0
LYD1_k127_5748282_2 PFAM helix-turn-helix domain protein - - - 0.0000000000000000000000000001133 121.0
LYD1_k127_5748282_3 PFAM membrane protein of K08972 - - 0.000000000000000000000000004455 115.0
LYD1_k127_584450_0 response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000003596 222.0
LYD1_k127_584450_1 Belongs to the P-Pant transferase superfamily K06133 - - 0.0000000000000000000000000000000000000001052 160.0
LYD1_k127_584450_2 Thioesterase domain - - - 0.000000000000000000000000000000655 132.0
LYD1_k127_5865810_0 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.000000000000000000000000000000000000001973 162.0
LYD1_k127_5895838_0 PFAM multicopper oxidase type 2 - - - 4.807e-310 967.0
LYD1_k127_5895838_1 PFAM cell divisionFtsK SpoIIIE K03466 - - 4.527e-296 962.0
LYD1_k127_5895838_10 DNA replication proofreading K02336,K06877 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 436.0
LYD1_k127_5895838_11 PFAM Fic DOC family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005273 417.0
LYD1_k127_5895838_12 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001567 386.0
LYD1_k127_5895838_13 Domain of unknown function DUF11 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005477 417.0
LYD1_k127_5895838_14 Family 4 glycosyl hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006269 379.0
LYD1_k127_5895838_15 Protein of unknown function DUF89 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002432 355.0
LYD1_k127_5895838_16 Major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003435 355.0
LYD1_k127_5895838_17 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004285 342.0
LYD1_k127_5895838_18 Inosine-uridine preferring nucleoside hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000709 320.0
LYD1_k127_5895838_19 PFAM binding-protein-dependent transport systems inner membrane component K02025 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 316.0
LYD1_k127_5895838_2 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537,K01539 - 3.6.3.8,3.6.3.9 2.42e-254 814.0
LYD1_k127_5895838_20 PFAM binding-protein-dependent transport systems inner membrane component K02026,K05815 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 300.0
LYD1_k127_5895838_21 spore germination K03298 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002316 297.0
LYD1_k127_5895838_22 GlcNAc-PI de-N-acetylase K01463 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004611 284.0
LYD1_k127_5895838_23 Uroporphyrinogen decarboxylase (URO-D) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000481 263.0
LYD1_k127_5895838_24 Transcriptional regulatory protein, C terminal K02483,K07667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005577 257.0
LYD1_k127_5895838_25 Belongs to the UPF0312 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005247 248.0
LYD1_k127_5895838_26 Putative NAD(P)-binding K03499 - - 0.000000000000000000000000000000000000000000000000000000000000000000000156 244.0
LYD1_k127_5895838_27 Histidine kinase K07646 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000002637 250.0
LYD1_k127_5895838_28 PFAM binding-protein-dependent transport systems inner membrane component K02025,K05814 - - 0.0000000000000000000000000000000000000000000000000000000000000000003419 239.0
LYD1_k127_5895838_29 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000002552 236.0
LYD1_k127_5895838_3 Cellulase N-terminal ig-like domain - - - 7.588e-198 642.0
LYD1_k127_5895838_30 Major Facilitator Superfamily K08223 - - 0.00000000000000000000000000000000000000000000000000000000000000001106 239.0
LYD1_k127_5895838_31 DNA alkylation repair - - - 0.00000000000000000000000000000000000000000000000000000000000000002248 230.0
LYD1_k127_5895838_32 COGs COG1653 ABC-type sugar transport system periplasmic component K02027 - - 0.0000000000000000000000000000000000000000000000000000000000000636 232.0
LYD1_k127_5895838_33 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000001244 226.0
LYD1_k127_5895838_34 TrkA-N domain K03499 - - 0.0000000000000000000000000000000000000000000000000000000000001731 222.0
LYD1_k127_5895838_35 Binding-protein-dependent transport system inner membrane component - - - 0.000000000000000000000000000000000000000000000000000000000001371 219.0
LYD1_k127_5895838_36 DinB superfamily - - - 0.000000000000000000000000000000000000000000000000000000003464 205.0
LYD1_k127_5895838_37 Extracellular solute-binding protein K02027 - - 0.0000000000000000000000000000000000000000000000000000006773 210.0
LYD1_k127_5895838_38 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000002474 201.0
LYD1_k127_5895838_39 Transposase - - - 0.00000000000000000000000000000000000000000000000000001556 195.0
LYD1_k127_5895838_4 - K07138 - - 1.102e-195 616.0
LYD1_k127_5895838_40 DNA-binding transcription factor activity K15973 - - 0.0000000000000000000000000000000000000000000000006544 178.0
LYD1_k127_5895838_41 - - - - 0.0000000000000000000000000000000000000000000008386 181.0
LYD1_k127_5895838_42 Serine aminopeptidase, S33 K03928 - 3.1.1.1 0.0000000000000000000000000000000000000000000009176 175.0
LYD1_k127_5895838_43 exo-alpha-(2->6)-sialidase activity - - - 0.000000000000000000000000000000000000000001179 176.0
LYD1_k127_5895838_44 methyltransferase K00563,K07112 - 2.1.1.187 0.000000000000000000000000000000000000000001491 170.0
LYD1_k127_5895838_45 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000003397 164.0
LYD1_k127_5895838_46 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.00000000000000000000000000000000000000003949 157.0
LYD1_k127_5895838_47 Osmosensitive K+ channel His kinase sensor domain K07646 - 2.7.13.3 0.0000000000000000000000000000000000003433 151.0
LYD1_k127_5895838_48 transport system, permease component K01992 - - 0.0000000000000000000000000000000000003762 152.0
LYD1_k127_5895838_49 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.00000000000000000000000000000000003498 153.0
LYD1_k127_5895838_5 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002561 547.0
LYD1_k127_5895838_50 Bacterial extracellular solute-binding protein K02027 - - 0.00000000000000000000000000000001375 143.0
LYD1_k127_5895838_51 ACT domain - - - 0.00000000000000000000000000004725 126.0
LYD1_k127_5895838_52 O-methyltransferase - - - 0.0000000000000000000000000001203 118.0
LYD1_k127_5895838_53 oxidoreductase activity K07114 - - 0.00000000000000000000000004396 126.0
LYD1_k127_5895838_54 domain protein K02674,K07004 - - 0.00000000000000000003972 104.0
LYD1_k127_5895838_55 Cro/C1-type HTH DNA-binding domain - - - 0.0000000000000000008024 93.0
LYD1_k127_5895838_57 amino acid - - - 0.00000000000001358 87.0
LYD1_k127_5895838_58 - - - - 0.000000000000203 76.0
LYD1_k127_5895838_6 PFAM N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) K01787 - 5.1.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005971 539.0
LYD1_k127_5895838_60 - - - - 0.00000000007709 66.0
LYD1_k127_5895838_61 protein secretion by the type VII secretion system - - - 0.000000001384 69.0
LYD1_k127_5895838_62 protein secretion by the type VII secretion system K21104 - 3.1.1.101 0.000000008137 60.0
LYD1_k127_5895838_63 Conserved repeat domain - - - 0.00000005646 64.0
LYD1_k127_5895838_64 - - - - 0.0000003045 59.0
LYD1_k127_5895838_65 protein kinase activity - - - 0.000001384 62.0
LYD1_k127_5895838_66 response regulator - - - 0.000002242 55.0
LYD1_k127_5895838_67 Serine Threonine protein kinase K08738 - - 0.00000813 57.0
LYD1_k127_5895838_68 Forkhead associated domain - - - 0.00001079 57.0
LYD1_k127_5895838_7 Family 4 glycosyl hydrolase K07406 - 3.2.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 499.0
LYD1_k127_5895838_8 metal-dependent phosphohydrolase, HD sub domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002821 476.0
LYD1_k127_5895838_9 ROK family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002085 451.0
LYD1_k127_595474_0 ATPases associated with a variety of cellular activities - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000692 394.0
LYD1_k127_595474_1 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000005095 149.0
LYD1_k127_595474_2 - - - - 0.000000002536 63.0
LYD1_k127_595474_3 - - - - 0.000958 45.0
LYD1_k127_6047705_0 ABC transporter, transmembrane region K06147,K18890 - - 6.59e-241 763.0
LYD1_k127_6047705_1 ferrous iron transmembrane transporter activity K04759 - - 8.957e-237 751.0
LYD1_k127_6047705_10 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family K14696 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002177 302.0
LYD1_k127_6047705_11 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004341 298.0
LYD1_k127_6047705_12 Formamidopyrimidine-DNA glycosylase H2TH domain K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008863 299.0
LYD1_k127_6047705_13 ATPases associated with a variety of cellular activities K02049 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007681 294.0
LYD1_k127_6047705_14 Glycosyl transferase family group 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001206 294.0
LYD1_k127_6047705_15 Xylose isomerase-like TIM barrel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006619 277.0
LYD1_k127_6047705_16 PFAM binding-protein-dependent transport systems inner membrane component K02050 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000166 265.0
LYD1_k127_6047705_17 Patatin-like phospholipase K06900 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004692 254.0
LYD1_k127_6047705_18 conserved protein (DUF2174) - - - 0.000000000000000000000000000000000000000000000000000000000000000001065 233.0
LYD1_k127_6047705_19 Aldolase/RraA - - - 0.0000000000000000000000000000000000000001361 159.0
LYD1_k127_6047705_2 PFAM ABC transporter transmembrane region K06147 - - 1.536e-235 743.0
LYD1_k127_6047705_20 CoA binding domain K06929 - - 0.0000000000000000000000000000000000000003159 158.0
LYD1_k127_6047705_21 - - - - 0.000000000000000000000000000000000001276 151.0
LYD1_k127_6047705_22 belongs to the Fur family K02076,K03711,K09825 - - 0.00000000000000000000000000000000003596 140.0
LYD1_k127_6047705_23 - - - - 0.00000000000000000000000000000000006994 145.0
LYD1_k127_6047705_24 Protein of unknown function with HXXEE motif - - - 0.000000000000000000000000000001054 128.0
LYD1_k127_6047705_25 BlaR1 peptidase M56 - - - 0.000000000000000000000000002009 126.0
LYD1_k127_6047705_26 Psort location Cytoplasmic, score - - - 0.000000000000000000000002759 107.0
LYD1_k127_6047705_28 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000164 107.0
LYD1_k127_6047705_3 Belongs to the glycosyl hydrolase 5 (cellulase A) family K19355 - 3.2.1.78 3.938e-207 669.0
LYD1_k127_6047705_30 YHS domain - - - 0.0000000000000261 74.0
LYD1_k127_6047705_31 Belongs to the glycosyl hydrolase 5 (cellulase A) family K01179,K13276 - 3.2.1.4 0.00000000000007826 74.0
LYD1_k127_6047705_33 FR47-like protein K03829 - - 0.000000005518 64.0
LYD1_k127_6047705_34 Methionine biosynthesis protein MetW - - - 0.000000007851 66.0
LYD1_k127_6047705_35 integral membrane protein K00728 - 2.4.1.109 0.00000001954 66.0
LYD1_k127_6047705_37 menaquinone-dependent protoporphyrinogen oxidase activity K00230 - 1.3.5.3 0.00000052 57.0
LYD1_k127_6047705_38 iron ion homeostasis K03709,K04758 - - 0.00000858 54.0
LYD1_k127_6047705_4 pyrroloquinoline quinone binding - - - 1.023e-194 637.0
LYD1_k127_6047705_40 PFAM transposase IS116 IS110 IS902 family K07486 - - 0.00008226 45.0
LYD1_k127_6047705_5 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004595 530.0
LYD1_k127_6047705_6 PFAM Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006961 445.0
LYD1_k127_6047705_7 PFAM NMT1 THI5 like domain protein K02051 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002236 381.0
LYD1_k127_6047705_8 Sugar (and other) transporter K08151 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004595 366.0
LYD1_k127_6047705_9 TIGRFAM Hopanoid biosynthesis associated radical SAM protein HpnJ K04034 - 1.21.98.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 344.0
LYD1_k127_6048779_0 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 1.451e-302 996.0
LYD1_k127_6048779_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 2.008e-257 803.0
LYD1_k127_6048779_10 Serine threonine protein kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003921 277.0
LYD1_k127_6048779_11 Protein of unknown function (DUF1638) - - - 0.00000000000000000000000000000000000000000000001505 181.0
LYD1_k127_6048779_12 Pfam:Arch_ATPase - - - 0.00000000000000000000000000000000000004437 168.0
LYD1_k127_6048779_13 PFAM phospholipid glycerol acyltransferase - - - 0.0000000000000000000000000000000000003667 151.0
LYD1_k127_6048779_14 PFAM Trimethylamine methyltransferase (MTTB) K14083 - 2.1.1.250 0.0000000000000000000000000001234 131.0
LYD1_k127_6048779_15 YhcH YjgK YiaL family - - - 0.0000000000000000000000000005258 118.0
LYD1_k127_6048779_16 - K06921 - - 0.0000000000000000000001136 114.0
LYD1_k127_6048779_17 PFAM Cell envelope-related transcriptional attenuator - - - 0.0000000001179 73.0
LYD1_k127_6048779_18 Belongs to the glycosyl hydrolase 5 (cellulase A) family K19355 - 3.2.1.78 0.0000000002065 75.0
LYD1_k127_6048779_19 PFAM transposase IS116 IS110 IS902 family K07486 - - 0.00007774 45.0
LYD1_k127_6048779_2 Lamin Tail Domain K07004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002602 636.0
LYD1_k127_6048779_20 ATPase histidine kinase DNA gyrase B HSP90 domain protein - - - 0.0007548 54.0
LYD1_k127_6048779_3 Amidase K01426 - 3.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005585 542.0
LYD1_k127_6048779_4 Leucyl aminopeptidase (Aminopeptidase T) K19689 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002771 479.0
LYD1_k127_6048779_5 COG0451 Nucleoside-diphosphate-sugar epimerases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007569 455.0
LYD1_k127_6048779_6 PFAM Extradiol ring-cleavage dioxygenase class III protein subunit B K15777 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002403 315.0
LYD1_k127_6048779_7 Mycolic acid cyclopropane synthetase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007803 297.0
LYD1_k127_6048779_8 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001535 313.0
LYD1_k127_6048779_9 inositol 2-dehydrogenase activity K18106 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003483 300.0
LYD1_k127_6071288_0 PFAM Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 - 3.4.21.26 1.957e-247 781.0
LYD1_k127_6071288_1 Cation transporter/ATPase, N-terminus K01531,K01535,K01537,K12952 - 3.6.3.2,3.6.3.6,3.6.3.8 1.942e-222 717.0
LYD1_k127_6071288_10 LysM domain - - - 0.00000000000000000000000000000000000000000000000000000000000001875 222.0
LYD1_k127_6071288_11 CAAX protease self-immunity - - - 0.0000000000000000000000000000000000000000000000000000000008957 211.0
LYD1_k127_6071288_12 PFAM Adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.000000000000000000000000000000000000000000000000004065 203.0
LYD1_k127_6071288_13 Glycosyl transferase 4-like domain - - - 0.000000000000000000000000000000000000000000000000005922 185.0
LYD1_k127_6071288_14 Multidrug efflux transporter K08151 - - 0.000000000000000000000000000000000000000000000000007118 197.0
LYD1_k127_6071288_15 Beta-lactamase K01286 - 3.4.16.4 0.0000000000000000000000000000000000000000000000001576 192.0
LYD1_k127_6071288_16 Chromate resistance exported protein - - - 0.000000000000000000000000000000000000000000009671 168.0
LYD1_k127_6071288_17 Pfam:DUF385 - - - 0.00000000000000000000000000000000000000003619 168.0
LYD1_k127_6071288_18 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000001376 120.0
LYD1_k127_6071288_19 SCP-2 sterol transfer family - - - 0.0000000000000000000000000004885 128.0
LYD1_k127_6071288_2 helix_turn_helix, Lux Regulon K03556 - - 5.514e-206 673.0
LYD1_k127_6071288_20 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000002268 119.0
LYD1_k127_6071288_21 Deoxynucleoside kinase - - - 0.000000000000000000002201 103.0
LYD1_k127_6071288_22 - - - - 0.0000000009616 64.0
LYD1_k127_6071288_3 nitrite transmembrane transporter activity K02532 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 566.0
LYD1_k127_6071288_4 polysaccharide biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008314 467.0
LYD1_k127_6071288_5 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001923 419.0
LYD1_k127_6071288_6 intracellular signal transduction - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001866 380.0
LYD1_k127_6071288_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001841 334.0
LYD1_k127_6071288_8 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 311.0
LYD1_k127_6071288_9 4Fe-4S binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004493 268.0
LYD1_k127_6142998_0 Alpha amylase catalytic - - - 0.0 1020.0
LYD1_k127_6142998_1 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 1.2e-304 1005.0
LYD1_k127_6142998_10 ATPases associated with a variety of cellular activities K03701 - - 4.843e-204 651.0
LYD1_k127_6142998_100 Cell wall-active antibiotics response 4TMS YvqF K11622 - - 0.00000003535 63.0
LYD1_k127_6142998_101 Transglutaminase/protease-like homologues - - - 0.00000004199 65.0
LYD1_k127_6142998_102 transcriptional regulator - - - 0.00000006116 60.0
LYD1_k127_6142998_103 protein kinase activity - - - 0.000004159 59.0
LYD1_k127_6142998_104 Integrase core domain - - - 0.000005069 48.0
LYD1_k127_6142998_105 prohibitin homologues - - - 0.000005302 58.0
LYD1_k127_6142998_106 Phage integrase, N-terminal SAM-like domain K04763 - - 0.00009243 46.0
LYD1_k127_6142998_107 Squalene/phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.0002248 52.0
LYD1_k127_6142998_11 DNA polymerase K02337,K14162 - 2.7.7.7 4.102e-200 661.0
LYD1_k127_6142998_12 Pfam Sulfatase - - - 2.954e-198 628.0
LYD1_k127_6142998_13 PFAM FAD dependent oxidoreductase K00111 - 1.1.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001672 627.0
LYD1_k127_6142998_14 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003069 586.0
LYD1_k127_6142998_15 ADP binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003001 600.0
LYD1_k127_6142998_16 PFAM extracellular solute-binding protein, family 5 K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007768 582.0
LYD1_k127_6142998_17 PFAM Mandelate racemase muconate lactonizing enzyme K01683,K01684,K08323 GO:0000287,GO:0003674,GO:0005488,GO:0043167,GO:0043169,GO:0046872 4.2.1.5,4.2.1.6,4.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002731 563.0
LYD1_k127_6142998_18 Protein of unknown function (DUF2961) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001275 558.0
LYD1_k127_6142998_19 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005876 555.0
LYD1_k127_6142998_2 FtsX-like permease family K02004 - - 4.087e-302 953.0
LYD1_k127_6142998_20 radical SAM K06871,K09858 GO:0006807,GO:0008150,GO:0008152,GO:0010467,GO:0019538,GO:0043170,GO:0044238,GO:0051604,GO:0071704,GO:1901564 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008372 539.0
LYD1_k127_6142998_21 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006932 539.0
LYD1_k127_6142998_22 pfkB family carbohydrate kinase K00874 - 2.7.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002282 511.0
LYD1_k127_6142998_23 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00113 - 1.1.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000177 513.0
LYD1_k127_6142998_24 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003031 506.0
LYD1_k127_6142998_25 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002068 471.0
LYD1_k127_6142998_26 Acetyl xylan esterase (AXE1) K01060 - 3.1.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002318 469.0
LYD1_k127_6142998_27 polysaccharide catabolic process K01179 - 3.2.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002824 464.0
LYD1_k127_6142998_28 Belongs to the ABC transporter superfamily K10823 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002821 460.0
LYD1_k127_6142998_29 Belongs to the ABC transporter superfamily K02031,K15583 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005241 440.0
LYD1_k127_6142998_3 COGs COG3533 conserved K09955 - - 5.736e-287 894.0
LYD1_k127_6142998_30 inositol 2-dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005564 436.0
LYD1_k127_6142998_31 PFAM ABC transporter related - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002565 431.0
LYD1_k127_6142998_32 Oligopeptide/dipeptide transporter, C-terminal region K02031,K02032,K10823,K10824 - 3.6.3.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004329 418.0
LYD1_k127_6142998_33 PFAM binding-protein-dependent transport systems inner membrane component K02033,K15581 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005244 416.0
LYD1_k127_6142998_34 Uroporphyrinogen decarboxylase (URO-D) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009497 421.0
LYD1_k127_6142998_35 Flavin containing amine oxidoreductase K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004559 419.0
LYD1_k127_6142998_36 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00322 - 1.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001664 417.0
LYD1_k127_6142998_37 Crystallin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004445 418.0
LYD1_k127_6142998_38 PFAM oxidoreductase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007848 407.0
LYD1_k127_6142998_39 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 421.0
LYD1_k127_6142998_4 ABC transporter K06147 - - 1.959e-284 885.0
LYD1_k127_6142998_40 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003222 425.0
LYD1_k127_6142998_41 peptidase activity, acting on L-amino acid peptides K20276,K21449 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002142 409.0
LYD1_k127_6142998_42 Oligopeptide/dipeptide transporter, C-terminal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008484 379.0
LYD1_k127_6142998_43 COG COG1073 Hydrolases of the alpha beta superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008994 381.0
LYD1_k127_6142998_44 Aldolase/RraA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001645 373.0
LYD1_k127_6142998_45 secretion protein HlyD family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003319 369.0
LYD1_k127_6142998_47 PFAM binding-protein-dependent transport systems inner membrane component K02034,K15582 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005422 353.0
LYD1_k127_6142998_48 PFAM ABC transporter related K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 327.0
LYD1_k127_6142998_49 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 312.0
LYD1_k127_6142998_5 Alpha-amylase domain K01182 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 3.2.1.10 8.891e-266 827.0
LYD1_k127_6142998_50 PFAM fumarate reductase succinate dehydrogenase flavoprotein domain protein K00112 - 1.1.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004893 331.0
LYD1_k127_6142998_51 Binding-protein-dependent transport system inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002328 305.0
LYD1_k127_6142998_52 FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002636 302.0
LYD1_k127_6142998_53 converts alpha-aldose to the beta-anomer - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004724 293.0
LYD1_k127_6142998_54 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001311 285.0
LYD1_k127_6142998_55 TIGRFAM glutamine amidotransferase of anthranilate synthase K01658 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006652 273.0
LYD1_k127_6142998_56 Binding-protein-dependent transport system inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002495 274.0
LYD1_k127_6142998_57 PFAM Radical SAM superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003203 285.0
LYD1_k127_6142998_58 Flavodoxin-like fold K01118 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000097 257.0
LYD1_k127_6142998_59 belongs to the carbohydrate kinase PfkB family K00882,K16370 - 2.7.1.11,2.7.1.56 0.00000000000000000000000000000000000000000000000000000000000000000000000002129 265.0
LYD1_k127_6142998_6 ABC transporter K06147 - - 5.056e-255 806.0
LYD1_k127_6142998_60 endonuclease exonuclease phosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004085 254.0
LYD1_k127_6142998_61 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000003861 244.0
LYD1_k127_6142998_62 peptidoglycan turnover - - - 0.000000000000000000000000000000000000000000000000000000000000000001282 243.0
LYD1_k127_6142998_63 Serine threonine protein kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000002394 246.0
LYD1_k127_6142998_64 Indole-3-glycerol phosphate synthase K01609 - 4.1.1.48 0.00000000000000000000000000000000000000000000000000000000000001864 224.0
LYD1_k127_6142998_65 hydrolase activity, acting on ester bonds K15357,K19311 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0019439,GO:0044237,GO:0044248 3.5.1.106 0.000000000000000000000000000000000000000000000000000000000003033 218.0
LYD1_k127_6142998_66 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000001241 214.0
LYD1_k127_6142998_67 Belongs to the TrpF family K01817 - 5.3.1.24 0.000000000000000000000000000000000000000000000000000000003342 207.0
LYD1_k127_6142998_68 histidine kinase dimerisation and phosphoacceptor region K03406,K07673,K07675 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000001018 217.0
LYD1_k127_6142998_69 Domain of unknown function (DUF362) - - - 0.0000000000000000000000000000000000000000000000000000006133 207.0
LYD1_k127_6142998_7 (ABC) transporter K06147,K11085 - - 1.056e-251 788.0
LYD1_k127_6142998_70 COG0500 SAM-dependent methyltransferases - - - 0.000000000000000000000000000000000000000000000000000003786 199.0
LYD1_k127_6142998_71 PFAM Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.00000000000000000000000000000000000000000000000000005883 202.0
LYD1_k127_6142998_72 Response regulator receiver - - - 0.000000000000000000000000000000000000000000000000002106 188.0
LYD1_k127_6142998_73 ATPases associated with a variety of cellular activities K03701 - - 0.000000000000000000000000000000000000000000000000007847 189.0
LYD1_k127_6142998_74 aminoglycoside 3-N-acetyltransferase K00662 - 2.3.1.81 0.00000000000000000000000000000000000000000000004552 178.0
LYD1_k127_6142998_75 Pkd domain containing protein K12567 - 2.7.11.1 0.000000000000000000000000000000000000000000007204 188.0
LYD1_k127_6142998_76 histidine kinase dimerisation and phosphoacceptor region - - - 0.000000000000000000000000000000000000000004563 177.0
LYD1_k127_6142998_77 Methylase involved in ubiquinone menaquinone biosynthesis - - - 0.00000000000000000000000000000000000000004115 160.0
LYD1_k127_6142998_78 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000002366 162.0
LYD1_k127_6142998_79 N-terminal 7TM region of histidine kinase - - - 0.000000000000000000000000000000000000006152 170.0
LYD1_k127_6142998_8 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 2.049e-246 771.0
LYD1_k127_6142998_80 Histidine kinase - - - 0.000000000000000000000000000000000000007518 167.0
LYD1_k127_6142998_81 coenzyme F420 binding - - - 0.00000000000000000000000000000000000001537 149.0
LYD1_k127_6142998_82 His Kinase A (phosphoacceptor) domain K11527 - 2.7.13.3 0.0000000000000000000000000000000000003821 164.0
LYD1_k127_6142998_83 DNA polymerase alpha chain like domain - - - 0.0000000000000000000000000000000001725 143.0
LYD1_k127_6142998_84 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0000000000000000000000000000000005407 138.0
LYD1_k127_6142998_85 Uroporphyrinogen decarboxylase (URO-D) - - - 0.0000000000000000000000000000001778 136.0
LYD1_k127_6142998_86 LVIVD repeat - - - 0.0000000000000000000000000000004385 143.0
LYD1_k127_6142998_87 PFAM transposase IS4 family protein - - - 0.000000000000000000000000000006293 129.0
LYD1_k127_6142998_88 - - - - 0.00000000000000000000000000002852 133.0
LYD1_k127_6142998_89 coenzyme F420 binding - - - 0.000000000000000000000000001303 118.0
LYD1_k127_6142998_9 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 9.974e-228 717.0
LYD1_k127_6142998_91 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000002965 104.0
LYD1_k127_6142998_92 Cytidine and deoxycytidylate deaminase zinc-binding region - - - 0.000000000000000000004668 96.0
LYD1_k127_6142998_93 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.000000000000000000006194 94.0
LYD1_k127_6142998_94 integrase family - - - 0.00000000000000000003071 91.0
LYD1_k127_6142998_95 -acetyltransferase - - - 0.000000000000000003554 98.0
LYD1_k127_6142998_96 Phage integrase family - - - 0.0000000000001908 75.0
LYD1_k127_6142998_97 CAAX protease self-immunity K07052 - - 0.0000000000007774 78.0
LYD1_k127_6142998_98 Cytidine and deoxycytidylate deaminase zinc-binding region - - - 0.00000000006714 64.0
LYD1_k127_6142998_99 Mycolic acid cyclopropane synthetase - - - 0.0000000003972 70.0
LYD1_k127_6151728_0 guanyl-nucleotide exchange factor activity K01183,K20276 GO:0005575,GO:0005623,GO:0008150,GO:0009279,GO:0009405,GO:0016020,GO:0019867,GO:0030260,GO:0030312,GO:0030313,GO:0031975,GO:0044403,GO:0044409,GO:0044419,GO:0044462,GO:0044464,GO:0051701,GO:0051704,GO:0051806,GO:0051828,GO:0071944 3.2.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 316.0
LYD1_k127_6151728_1 metallopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000003071 239.0
LYD1_k127_6151728_2 serine-type endopeptidase activity K20276 - - 0.000000000000000000000000000000000000000000001596 191.0
LYD1_k127_6151728_3 metallopeptidase activity - - - 0.000000000000000000000000000000000000006226 164.0
LYD1_k127_6151728_4 Peptidase family M48 - - - 0.0000000000000000000000000000002704 126.0
LYD1_k127_6151728_5 Fibronectin type 3 domain K12685,K16785,K16786,K16787 - - 0.000000000000000000002404 107.0
LYD1_k127_6151728_6 Collagen triple helix repeat (20 copies) - - - 0.00000000000000006722 93.0
LYD1_k127_6151728_7 calcium- and calmodulin-responsive adenylate cyclase activity K00505,K01406,K07004 - 1.14.18.1,3.4.24.40 0.000000000000000214 95.0
LYD1_k127_6151728_8 ATP-dependent transcriptional regulator, MalT-like, LuxR family K03556 - - 0.00000008886 58.0
LYD1_k127_6173976_0 Alpha-Mannosidase K01191,K15524 GO:0003674,GO:0003824,GO:0004553,GO:0004559,GO:0005975,GO:0005996,GO:0006013,GO:0006464,GO:0006517,GO:0006807,GO:0008150,GO:0008152,GO:0009100,GO:0009987,GO:0015923,GO:0016787,GO:0016798,GO:0019318,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0071704,GO:1901135,GO:1901564 3.2.1.170,3.2.1.24 1.515e-294 933.0
LYD1_k127_6173976_1 Molybdopterin oxidoreductase Fe4S4 domain K00123 - 1.17.1.9 1.577e-251 786.0
LYD1_k127_6173976_10 spermidine synthase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002255 321.0
LYD1_k127_6173976_11 transmembrane transport K09696 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001737 304.0
LYD1_k127_6173976_12 Tail sheath protein K06907 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 293.0
LYD1_k127_6173976_13 acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002002 281.0
LYD1_k127_6173976_14 PFAM membrane-flanked domain - - - 0.00000000000000000000000000000000000000000000000000000000008106 211.0
LYD1_k127_6173976_15 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase - - - 0.00000000000000000000000000000000000000000000000000000004129 210.0
LYD1_k127_6173976_16 TIGRFAM polymorphic outer membrane protein K21449 - - 0.000000000000000000000000000000000000000000000000001479 206.0
LYD1_k127_6173976_17 WD40-like Beta Propeller Repeat K03641 - - 0.00000000000000000000000000000000000000000000006327 186.0
LYD1_k127_6173976_18 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000001169 167.0
LYD1_k127_6173976_19 2 iron, 2 sulfur cluster binding K00334,K03943 - 1.6.5.3,1.6.99.3 0.0000000000000000000000000000005217 127.0
LYD1_k127_6173976_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008905 499.0
LYD1_k127_6173976_20 GlcNAc-PI de-N-acetylase K22408 - - 0.00000000000000000000000000004836 129.0
LYD1_k127_6173976_21 Creatininase K01470 - 3.5.2.10 0.0000000000000000000000000001759 128.0
LYD1_k127_6173976_23 Protein of unknown function (DUF3592) - - - 0.0000000000000000004326 95.0
LYD1_k127_6173976_24 DinB superfamily - - - 0.000000000002908 73.0
LYD1_k127_6173976_25 Belongs to the glycosyl hydrolase 43 family K01198 - 3.2.1.37 0.000000008993 68.0
LYD1_k127_6173976_26 LVIVD repeat - - - 0.00000009391 60.0
LYD1_k127_6173976_27 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.000005587 58.0
LYD1_k127_6173976_3 PFAM major facilitator superfamily MFS_1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 499.0
LYD1_k127_6173976_4 TAP-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 473.0
LYD1_k127_6173976_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 449.0
LYD1_k127_6173976_6 MFS_1 like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009358 418.0
LYD1_k127_6173976_7 formate dehydrogenase (NAD+) activity K05299 - 1.17.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004775 405.0
LYD1_k127_6173976_8 SMART Integrin alpha beta-propellor repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004055 379.0
LYD1_k127_6173976_9 ABC transporter K09697 - 3.6.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 327.0
LYD1_k127_6197083_0 VWA domain containing CoxE-like protein K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001734 369.0
LYD1_k127_6197083_1 Adenylate cyclase K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000004024 194.0
LYD1_k127_6197083_2 Acyl-transferase - - - 0.00000000000000000000000000001807 124.0
LYD1_k127_6197083_3 Psort location CytoplasmicMembrane, score - - - 0.0000000000001965 83.0
LYD1_k127_6337251_0 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 0.00000000000000000000000000000001916 142.0
LYD1_k127_6337251_1 - - - - 0.000000000000000003947 87.0
LYD1_k127_6337251_2 chromosome segregation - - - 0.0000000000000002429 90.0
LYD1_k127_6337251_3 Belongs to the N(4) N(6)-methyltransferase family - - - 0.000000000003508 73.0
LYD1_k127_6337251_4 HicB_like antitoxin of bacterial toxin-antitoxin system - - - 0.00000000002928 68.0
LYD1_k127_6337251_5 Cro/C1-type HTH DNA-binding domain K07727 - - 0.0000002326 55.0
LYD1_k127_6337251_6 Protein of unknown function (DUF3102) - - - 0.0000009329 60.0
LYD1_k127_6337251_7 HicA toxin of bacterial toxin-antitoxin, - - - 0.000003126 53.0
LYD1_k127_6337251_8 - - - - 0.00002396 53.0
LYD1_k127_6337251_9 - - - - 0.00008333 51.0
LYD1_k127_6357221_0 Bacterial sugar transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006483 508.0
LYD1_k127_6357221_1 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 390.0
LYD1_k127_6357221_2 endoribonuclease L-PSP K09022 - 3.5.99.10 0.000000000000000000000000000000000000001381 150.0
LYD1_k127_6357221_3 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000001254 65.0
LYD1_k127_6357221_4 Polysaccharide biosynthesis protein K01710,K01784 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944 4.2.1.46,5.1.3.2 0.000000002313 58.0
LYD1_k127_6357221_5 - - - - 0.000000005697 61.0
LYD1_k127_6358013_0 ATPases associated with a variety of cellular activities - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005424 388.0
LYD1_k127_6358013_1 Transport permease protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001161 297.0
LYD1_k127_6358013_2 ABC-type multidrug transport system ATPase component K01990 - - 0.000000000000000000000000000000000000008392 148.0
LYD1_k127_6375416_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1083.0
LYD1_k127_6375416_1 PFAM Nucleotidyl transferase K00963 - 2.7.7.9 1.4e-322 996.0
LYD1_k127_6375416_10 diguanylate cyclase (GGDEF) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 587.0
LYD1_k127_6375416_11 ABC transporter permease K02011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001762 526.0
LYD1_k127_6375416_12 aminotransferase class I and II K10907 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002318 501.0
LYD1_k127_6375416_13 PFAM Aminotransferase class I and II K14155 - 4.4.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007932 471.0
LYD1_k127_6375416_14 PFAM Bacterial sugar transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 475.0
LYD1_k127_6375416_15 PFAM Rhodanese domain protein K01011 - 2.8.1.1,2.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003942 449.0
LYD1_k127_6375416_16 NfeD-like C-terminal, partner-binding K07403 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001498 456.0
LYD1_k127_6375416_17 PFAM NAD dependent epimerase dehydratase family K01710 - 4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009561 447.0
LYD1_k127_6375416_18 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009959 453.0
LYD1_k127_6375416_19 phosphoglycerate mutase K15635 - 5.4.2.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001188 439.0
LYD1_k127_6375416_2 Belongs to the PEP-utilizing enzyme family K01007 - 2.7.9.2 2.805e-305 953.0
LYD1_k127_6375416_20 activity, protein serine threonine kinase activity, protein-tyrosine kinase activity, ATP binding, regulation of transcription, DNA-dependent, protein amino acid phosphorylation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002744 456.0
LYD1_k127_6375416_21 SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity K03547 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 434.0
LYD1_k127_6375416_22 Peptidase_C39 like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 424.0
LYD1_k127_6375416_23 HD domain K07814 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000866 412.0
LYD1_k127_6375416_24 PFAM Nucleotidyl transferase K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001878 407.0
LYD1_k127_6375416_25 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K00266 - 1.4.1.13,1.4.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009818 406.0
LYD1_k127_6375416_26 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000616 378.0
LYD1_k127_6375416_27 PHP domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005683 376.0
LYD1_k127_6375416_28 ATPases associated with a variety of cellular activities K02010 - 3.6.3.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003051 362.0
LYD1_k127_6375416_29 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005316 349.0
LYD1_k127_6375416_3 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 4.394e-223 698.0
LYD1_k127_6375416_30 PFAM Nucleotidyl transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003263 340.0
LYD1_k127_6375416_31 Microcin C7 resistance K01297 GO:0000270,GO:0003674,GO:0003824,GO:0004180,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006022,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0009050,GO:0009056,GO:0009254,GO:0009987,GO:0016787,GO:0019538,GO:0030203,GO:0034641,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 3.4.17.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002026 345.0
LYD1_k127_6375416_32 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004874 342.0
LYD1_k127_6375416_33 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002798 331.0
LYD1_k127_6375416_34 Phosphate transporter family K03306 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002525 329.0
LYD1_k127_6375416_35 Double zinc ribbon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009726 306.0
LYD1_k127_6375416_36 PFAM deoxynucleoside kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001753 305.0
LYD1_k127_6375416_37 Oxidoreductase family, C-terminal alpha beta domain K16043 - 1.1.1.370 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 308.0
LYD1_k127_6375416_38 SNARE associated Golgi protein K03975 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005184 293.0
LYD1_k127_6375416_39 PFAM peptidase S1 and S6, chymotrypsin Hap - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009457 293.0
LYD1_k127_6375416_4 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 5.413e-215 681.0
LYD1_k127_6375416_40 Haloacid dehalogenase-like hydrolase K07025 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002312 278.0
LYD1_k127_6375416_41 NapC/NirT cytochrome c family, N-terminal region K15876 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009982 256.0
LYD1_k127_6375416_42 Haloacid dehalogenase-like hydrolase K07025 - - 0.00000000000000000000000000000000000000000000000000000000000003224 223.0
LYD1_k127_6375416_43 of the drug metabolite transporter (DMT) superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000001636 222.0
LYD1_k127_6375416_44 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000000000000000000000000000000000000000644 216.0
LYD1_k127_6375416_45 PFAM lipopolysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000106 229.0
LYD1_k127_6375416_46 enterobactin catabolic process K07214 - - 0.00000000000000000000000000000000000000000000000000000000146 212.0
LYD1_k127_6375416_47 biotin lipoate A B protein ligase K03524 - 6.3.4.15 0.0000000000000000000000000000000000000000000000000000004081 203.0
LYD1_k127_6375416_48 protein domain associated with - - - 0.00000000000000000000000000000000000000000000000000001271 203.0
LYD1_k127_6375416_49 oligosaccharyl transferase activity - - - 0.000000000000000000000000000000000000000000000000000045 209.0
LYD1_k127_6375416_5 PFAM peptidase M3A and M3B, thimet oligopeptidase F K08602 - - 5.62e-203 650.0
LYD1_k127_6375416_50 phosphate transport regulator (Distant homolog of PhoU) K07220 - - 0.0000000000000000000000000000000000000000000000000007443 190.0
LYD1_k127_6375416_51 Trypsin-like peptidase domain K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000002402 180.0
LYD1_k127_6375416_52 iron-sulfur cluster assembly K02426,K07125 - - 0.00000000000000000000000000000000000000000000008919 172.0
LYD1_k127_6375416_53 COGs COG0524 Sugar kinase ribokinase family - - - 0.000000000000000000000000000000000000000000000148 179.0
LYD1_k127_6375416_54 Psort location CytoplasmicMembrane, score - - - 0.000000000000000000000000000000000000000000002176 168.0
LYD1_k127_6375416_55 Bacterial extracellular solute-binding protein - - - 0.0000000000000000000000000000000000000000001198 175.0
LYD1_k127_6375416_56 FKBP-type peptidyl-prolyl cis-trans isomerase K01802,K03775 - 5.2.1.8 0.0000000000000000000000000000000000000001548 155.0
LYD1_k127_6375416_57 PFAM regulatory protein LuxR - - - 0.0000000000000000000000000000000000000005535 158.0
LYD1_k127_6375416_58 HAD-hyrolase-like K07025 - - 0.0000000000000000000000000000000000000009895 166.0
LYD1_k127_6375416_59 phosphatase activity - - - 0.000000000000000000000000000000000000002406 165.0
LYD1_k127_6375416_6 PFAM SMC domain protein K03546 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001946 630.0
LYD1_k127_6375416_60 myo-inosose-2 dehydratase activity K01805 - 5.3.1.5 0.000000000000000000000000000000000000003755 158.0
LYD1_k127_6375416_63 Phage integrase family - - - 0.000000000000000000000000000000000005886 145.0
LYD1_k127_6375416_64 transcriptional regulator, RpiR family - - - 0.0000000000000000000000000000000001576 143.0
LYD1_k127_6375416_65 Protein of unknown function (DUF4242) - - - 0.0000000000000000000000000000000003871 134.0
LYD1_k127_6375416_66 Belongs to the 'phage' integrase family - - - 0.00000000000000000000000007313 116.0
LYD1_k127_6375416_67 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00000000000000000000000008051 109.0
LYD1_k127_6375416_68 Pyridoxamine 5'-phosphate oxidase - - - 0.0000000000000000000002352 102.0
LYD1_k127_6375416_69 Chain length determinant protein - - - 0.00000000000006216 86.0
LYD1_k127_6375416_7 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K03385 - 1.7.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002428 597.0
LYD1_k127_6375416_70 Phosphoribulokinase / Uridine kinase family K00876 GO:0003674,GO:0003824,GO:0004849,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006464,GO:0006508,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007610,GO:0007631,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009611,GO:0009628,GO:0009987,GO:0016301,GO:0016310,GO:0016579,GO:0016740,GO:0016772,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0036211,GO:0042221,GO:0042455,GO:0043094,GO:0043097,GO:0043170,GO:0043174,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0048678,GO:0050896,GO:0051716,GO:0055086,GO:0070482,GO:0070646,GO:0070647,GO:0070887,GO:0071453,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.7.1.48 0.000000002515 69.0
LYD1_k127_6375416_71 iron dependent repressor - - - 0.0000001158 55.0
LYD1_k127_6375416_72 CAAX protease self-immunity K07052 - - 0.000005826 57.0
LYD1_k127_6375416_74 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802 - 5.2.1.8 0.00003359 51.0
LYD1_k127_6375416_75 Serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.0001392 53.0
LYD1_k127_6375416_8 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004034 586.0
LYD1_k127_6375416_9 BPG-independent PGAM N-terminus (iPGM_N) K15633 - 5.4.2.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004513 574.0
LYD1_k127_6503697_0 Transketolase, pyrimidine binding domain K00162,K21417 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005948 370.0
LYD1_k127_6503697_1 PFAM Transaldolase K00616 - 2.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009313 330.0
LYD1_k127_6503697_2 of components of various dehydrogenase complexes K00627 - 2.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000322 295.0
LYD1_k127_6503697_3 Asp Glu hydantoin racemase - - - 0.000000000000000000000000000000000000000000000000001032 191.0
LYD1_k127_6533219_0 Acyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004206 334.0
LYD1_k127_6533219_1 SMART Tetratricopeptide domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004262 297.0
LYD1_k127_6533219_2 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000004712 241.0
LYD1_k127_6533219_3 histidine kinase, dimerisation and phosphoacceptor region - - - 0.0000000000000000000000000000000000001517 156.0
LYD1_k127_6533219_4 histidine kinase, dimerisation and phosphoacceptor region - - - 0.000000000002514 77.0
LYD1_k127_6622218_0 Belongs to the DEAD box helicase family K05592 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003167 537.0
LYD1_k127_6622218_1 - - - - 0.0007884 49.0
LYD1_k127_6647937_0 PHP domain protein K02347 - - 9.56e-207 658.0
LYD1_k127_6647937_1 - - - - 0.000007103 54.0
LYD1_k127_6778945_0 DNA methylase K07316 - 2.1.1.72 0.0 1229.0
LYD1_k127_6778945_1 Type II/IV secretion system protein K02283 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009901 555.0
LYD1_k127_6778945_10 Type III restriction enzyme res subunit K01156 - 3.1.21.5 0.000000000000000000000000000000000000000000000000000000000000000000000003032 246.0
LYD1_k127_6778945_11 B12 binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000005007 244.0
LYD1_k127_6778945_12 D-aminopeptidase K16203 - - 0.000000000000000000000000000000000000000000000000000000000000000000009325 242.0
LYD1_k127_6778945_13 - - - - 0.00000000000000000000000000000000000000000000000000000002385 203.0
LYD1_k127_6778945_14 Type II secretion system (T2SS), protein F K12511 - - 0.00000000000000000000000000000000000000000000000000000005576 207.0
LYD1_k127_6778945_15 Type II secretion system (T2SS), protein F K12510 - - 0.00000000000000000000000000000000000000000000000000001566 201.0
LYD1_k127_6778945_16 response regulator, receiver K07814 - - 0.00000000000000000000000000000000000000000000000000001835 195.0
LYD1_k127_6778945_17 AAA domain K02282 - - 0.0000000000000000000000000000000000000000000000000001735 201.0
LYD1_k127_6778945_18 NlpC/P60 family K20742,K21471 - 3.4.14.13 0.00000000000000000000000000000000000000000000000002421 201.0
LYD1_k127_6778945_19 - - - - 0.0000000000000000000000000000000009349 136.0
LYD1_k127_6778945_2 Protein of unknown function DUF262 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002016 559.0
LYD1_k127_6778945_20 Alpha beta hydrolase fold - - - 0.00000000000000000000000005488 124.0
LYD1_k127_6778945_21 PFAM TadE family protein - - - 0.000000000000000000002802 98.0
LYD1_k127_6778945_22 - - - - 0.000000000000000007985 93.0
LYD1_k127_6778945_23 - - - - 0.000000007649 66.0
LYD1_k127_6778945_24 DNA methylase K07316 - 2.1.1.72 0.0000001456 57.0
LYD1_k127_6778945_25 TadE-like protein - - - 0.00000837 55.0
LYD1_k127_6778945_26 pilus assembly protein CpaB K02279 - - 0.00001163 56.0
LYD1_k127_6778945_27 Tetratricopeptide repeat - - - 0.0004 53.0
LYD1_k127_6778945_28 Putative Flp pilus-assembly TadE/G-like - - - 0.0004823 52.0
LYD1_k127_6778945_3 PFAM aldo keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000275 527.0
LYD1_k127_6778945_4 Type III restriction enzyme res subunit K01156 - 3.1.21.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009714 439.0
LYD1_k127_6778945_5 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 374.0
LYD1_k127_6778945_6 Ornithine cyclodeaminase/mu-crystallin family K01750,K19244 - 1.4.1.1,4.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004343 370.0
LYD1_k127_6778945_7 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K02549,K19802 GO:0003674,GO:0003824,GO:0016853,GO:0016854,GO:0016855 4.2.1.113,5.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002501 346.0
LYD1_k127_6778945_8 Male sterility protein K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002662 339.0
LYD1_k127_6778945_9 CO dehydrogenase/acetyl-CoA synthase delta subunit K00548 - 2.1.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000837 291.0
LYD1_k127_6803467_0 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain - - - 1.861e-194 614.0
LYD1_k127_6803467_1 PFAM aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003397 621.0
LYD1_k127_6803467_10 Acetyltransferase (GNAT) family - - - 0.000000000000000000000000000000000000004782 159.0
LYD1_k127_6803467_12 MFS/sugar transport protein - - - 0.00000000000000000000000000005881 131.0
LYD1_k127_6803467_13 sterol carrier protein - - - 0.000000000000000001299 92.0
LYD1_k127_6803467_2 Winged helix DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004687 398.0
LYD1_k127_6803467_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003146 342.0
LYD1_k127_6803467_4 Protein of unknown function, DUF488 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001799 309.0
LYD1_k127_6803467_5 Peptidase family M1 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001839 304.0
LYD1_k127_6803467_6 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000009583 196.0
LYD1_k127_6803467_7 Putative modulator of DNA gyrase K03592 - - 0.0000000000000000000000000000000000000000000000000001449 193.0
LYD1_k127_6803467_8 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004812,GO:0004824,GO:0005488,GO:0005524,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006430,GO:0006518,GO:0006520,GO:0006629,GO:0006644,GO:0006650,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009059,GO:0009405,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019637,GO:0019752,GO:0030312,GO:0030322,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0040007,GO:0042221,GO:0042391,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046471,GO:0046483,GO:0046486,GO:0046677,GO:0046872,GO:0050896,GO:0051704,GO:0065007,GO:0065008,GO:0071704,GO:0071944,GO:0090304,GO:0090407,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.6 0.0000000000000000000000000000000000000000000000000002234 193.0
LYD1_k127_6803467_9 - - - - 0.000000000000000000000000000000000000000000000364 175.0
LYD1_k127_6819547_0 ATPase AAA-2 domain protein K03696 - - 0.0 1231.0
LYD1_k127_6819547_1 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001765 491.0
LYD1_k127_6819547_10 - - - - 0.0000000000000000000000000000000000000000000000001081 187.0
LYD1_k127_6819547_11 - - - - 0.00000000000000000000000000000000000001114 151.0
LYD1_k127_6819547_12 HD domain - - - 0.0000000000000000000000000000003324 138.0
LYD1_k127_6819547_13 PFAM regulatory protein, MerR - - - 0.000000000000000000000000000004756 127.0
LYD1_k127_6819547_14 response regulator, receiver - - - 0.000000000000000000000000004723 129.0
LYD1_k127_6819547_15 TIGRFAM DNA polymerase III, delta' subunit K02340 - 2.7.7.7 0.000000000000000000005016 100.0
LYD1_k127_6819547_2 PFAM PUCC protein K08226 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000031 455.0
LYD1_k127_6819547_3 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000182 457.0
LYD1_k127_6819547_4 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003921 406.0
LYD1_k127_6819547_5 PFAM inositol monophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002458 374.0
LYD1_k127_6819547_6 PFAM peptidase S58, DmpA - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003166 376.0
LYD1_k127_6819547_7 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000973 351.0
LYD1_k127_6819547_8 PFAM RNA binding S1 domain protein K02945 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002571 357.0
LYD1_k127_6819547_9 RNA methylase K07446 GO:0000049,GO:0001510,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004809,GO:0005488,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0140098,GO:0140101,GO:1901360,GO:1901363 2.1.1.213 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003092 290.0
LYD1_k127_786648_0 beta-glucosidase 2, glycosyl-hydrolase family 116 N-term - - - 8.2e-305 955.0
LYD1_k127_786648_1 Domain of unknown function (DUF5107) - - - 3.896e-287 917.0
LYD1_k127_786648_10 N-4 methylation of cytosine K00571,K00590 - 2.1.1.113,2.1.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005825 426.0
LYD1_k127_786648_11 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K02484,K07642 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001673 427.0
LYD1_k127_786648_12 Catalyzes the reversible epimerization of cellobiose to 4-O-beta-D-glucopyranosyl-D-mannose (Glc-Man) K16213 - 5.1.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002691 413.0
LYD1_k127_786648_13 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008213 361.0
LYD1_k127_786648_14 acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001849 343.0
LYD1_k127_786648_15 Two component transcriptional regulator, winged helix family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004193 330.0
LYD1_k127_786648_16 PFAM Short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005035 333.0
LYD1_k127_786648_17 Belongs to the glycosyl hydrolase 18 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000044 289.0
LYD1_k127_786648_18 Beta-L-arabinofuranosidase, GH127 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001261 278.0
LYD1_k127_786648_19 PFAM Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000001491 263.0
LYD1_k127_786648_2 Eco57I restriction-modification methylase - - - 7.331e-234 755.0
LYD1_k127_786648_20 KR domain K00034 - 1.1.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000002541 261.0
LYD1_k127_786648_21 Type II restriction endonuclease EcoO109I - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002335 251.0
LYD1_k127_786648_22 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000001857 246.0
LYD1_k127_786648_24 KAP family P-loop domain K12460,K18167 - - 0.000000000000000000000000000000000000000000000000000001266 220.0
LYD1_k127_786648_25 Protein of unknown function (DUF664) - - - 0.000000000000000000000000000000000000000000000000001172 187.0
LYD1_k127_786648_27 Psort location Cytoplasmic, score - - - 0.00000000000000000000000000000001524 146.0
LYD1_k127_786648_28 - - - - 0.00000000000000000000000005268 120.0
LYD1_k127_786648_29 Domain of unknown function (DUF1854) - - - 0.0000000000000000000001563 104.0
LYD1_k127_786648_3 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 5.006e-229 720.0
LYD1_k127_786648_30 PFAM Transposase DDE domain - - - 0.00000000000000000006149 97.0
LYD1_k127_786648_31 PRC-barrel domain - - - 0.000000000000693 77.0
LYD1_k127_786648_32 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000001081 74.0
LYD1_k127_786648_33 PFAM Peptidase M23 - - - 0.00000000001546 74.0
LYD1_k127_786648_34 - - - - 0.0000002157 63.0
LYD1_k127_786648_35 Integrase core domain - - - 0.000003476 48.0
LYD1_k127_786648_37 PFAM Archaeal ATPase - - - 0.0000351 58.0
LYD1_k127_786648_38 PFAM transposase IS116 IS110 IS902 family K07486 - - 0.00007774 45.0
LYD1_k127_786648_4 ABC transporter - - - 5.624e-204 647.0
LYD1_k127_786648_5 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000073 600.0
LYD1_k127_786648_6 Beta-L-arabinofuranosidase, GH127 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001778 574.0
LYD1_k127_786648_7 ABC transporter K06147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 538.0
LYD1_k127_786648_8 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006203 440.0
LYD1_k127_786648_9 Glycogen debranching enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008459 462.0
LYD1_k127_8059_0 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 404.0
LYD1_k127_8059_1 NmrA-like family K19267 - 1.6.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008222 278.0
LYD1_k127_8059_2 serine-type peptidase activity - - - 0.00000000000000000000000000000000000001073 156.0
LYD1_k127_8059_3 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) K03594 - 1.16.3.1 0.000000000006101 72.0
LYD1_k127_874500_0 ABC transporter, ATP-binding protein K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002651 337.0
LYD1_k127_874500_1 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000001802 211.0
LYD1_k127_874500_2 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000001179 175.0
LYD1_k127_88794_0 PFAM Transaldolase K00616 - 2.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 330.0
LYD1_k127_88794_1 Transketolase, pyrimidine binding domain K00162,K21417 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003267 310.0
LYD1_k127_88794_2 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K00627,K00658 - 2.3.1.12,2.3.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004809 298.0
LYD1_k127_88794_3 Asp Glu hydantoin racemase - - - 0.0000000000000000000000000000000000000000000000000003432 192.0
LYD1_k127_900938_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1260.0
LYD1_k127_900938_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378 - 1.6.5.3 1.937e-297 920.0
LYD1_k127_900938_10 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000865 600.0
LYD1_k127_900938_11 PFAM Hydantoinase B oxoprolinase K01474 - 3.5.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009293 610.0
LYD1_k127_900938_12 unusual protein kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001707 560.0
LYD1_k127_900938_13 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009964 525.0
LYD1_k127_900938_14 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 507.0
LYD1_k127_900938_15 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002165 515.0
LYD1_k127_900938_16 acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006501 494.0
LYD1_k127_900938_17 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004335 483.0
LYD1_k127_900938_18 PFAM thiamine pyrophosphate protein domain protein TPP-binding K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003191 476.0
LYD1_k127_900938_19 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002027 464.0
LYD1_k127_900938_2 leucyl-tRNA aminoacylation K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0030312,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 4.05e-296 930.0
LYD1_k127_900938_20 SMART Elongator protein 3 MiaB NifB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002802 454.0
LYD1_k127_900938_21 Peptidase dimerisation domain protein K01436 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003914 444.0
LYD1_k127_900938_22 PFAM CBS domain K03699 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002777 426.0
LYD1_k127_900938_23 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005241 409.0
LYD1_k127_900938_24 PFAM Citrate transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004723 410.0
LYD1_k127_900938_25 Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes K09121 - 4.99.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000451 398.0
LYD1_k127_900938_26 extracellular matrix structural constituent - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002784 391.0
LYD1_k127_900938_27 Lipocalin-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002532 377.0
LYD1_k127_900938_28 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00015,K15893 - 1.1.1.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002876 366.0
LYD1_k127_900938_29 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006381 356.0
LYD1_k127_900938_3 Pyruvate flavodoxin ferredoxin oxidoreductase domain protein K00174 - 1.2.7.11,1.2.7.3 2.041e-252 794.0
LYD1_k127_900938_30 Major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008988 362.0
LYD1_k127_900938_31 PFAM PSP1 domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000333 324.0
LYD1_k127_900938_32 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002262 306.0
LYD1_k127_900938_33 tRNA processing K06864 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008269 300.0
LYD1_k127_900938_34 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002296 301.0
LYD1_k127_900938_35 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008502 292.0
LYD1_k127_900938_36 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002307 285.0
LYD1_k127_900938_37 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00338,K03615 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003417 281.0
LYD1_k127_900938_38 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003751 289.0
LYD1_k127_900938_39 (AIR) carboxylase K06898 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002369 278.0
LYD1_k127_900938_4 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 3.605e-221 701.0
LYD1_k127_900938_40 PFAM ABC transporter related K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007488 267.0
LYD1_k127_900938_41 PFAM periplasmic binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000047 253.0
LYD1_k127_900938_42 pfkB family carbohydrate kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006455 250.0
LYD1_k127_900938_43 NmrA-like family K00329,K00356 - 1.6.5.3,1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000006254 242.0
LYD1_k127_900938_44 acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000009684 221.0
LYD1_k127_900938_45 GlcNAc-PI de-N-acetylase - - - 0.000000000000000000000000000000000000000000000000000001003 203.0
LYD1_k127_900938_46 helix_turn_helix, mercury resistance - - - 0.00000000000000000000000000000000000000000000000000001524 205.0
LYD1_k127_900938_47 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.0000000000000000000000000000000000000000000000000003272 195.0
LYD1_k127_900938_48 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.000000000000000000000000000000000000000000000000001704 186.0
LYD1_k127_900938_49 heme binding K03791,K08642,K21472 - - 0.0000000000000000000000000000000000000000000000005802 189.0
LYD1_k127_900938_5 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 2.808e-219 692.0
LYD1_k127_900938_50 Xylose isomerase-like TIM barrel - - - 0.00000000000000000000000000000000000000000000001305 181.0
LYD1_k127_900938_52 - - - - 0.000000000000000000000000000000000000000003658 159.0
LYD1_k127_900938_54 PFAM short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.00000000000000000000000000000000008451 134.0
LYD1_k127_900938_55 glyoxalase III activity K13653 - - 0.0000000000000000000000000000004399 138.0
LYD1_k127_900938_56 - - - - 0.00000000000000000000000000001045 123.0
LYD1_k127_900938_57 Asp23 family, cell envelope-related function - - - 0.00000000000000000000000000007267 119.0
LYD1_k127_900938_58 LysE type translocator - - - 0.00000000000000000000000002665 125.0
LYD1_k127_900938_6 MacB-like periplasmic core domain K02004 - - 7.316e-213 689.0
LYD1_k127_900938_60 Bacterial Ig-like domain (group 1) - - - 0.0000000000000000000002231 114.0
LYD1_k127_900938_61 sterol carrier protein - - - 0.000000000000000000004283 96.0
LYD1_k127_900938_63 Cytochrome b5-like Heme/Steroid binding domain - - - 0.0000000000000004089 80.0
LYD1_k127_900938_64 protein secretion K03116,K03117 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009977,GO:0015031,GO:0015291,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0032991,GO:0033036,GO:0033281,GO:0034613,GO:0040007,GO:0042802,GO:0042886,GO:0042887,GO:0043953,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098796,GO:0098797,GO:1904680 - 0.00000000003963 70.0
LYD1_k127_900938_65 Peptidase family M23 - - - 0.000000006236 68.0
LYD1_k127_900938_66 Fe-S assembly protein IscX - GO:0003674,GO:0004857,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008150,GO:0008152,GO:0008198,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0030234,GO:0031163,GO:0043086,GO:0043167,GO:0043169,GO:0044085,GO:0044092,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050790,GO:0051186,GO:0065007,GO:0065009,GO:0071840,GO:0098772 - 0.0000003915 55.0
LYD1_k127_900938_67 PFAM regulatory protein, ArsR - - - 0.000001519 59.0
LYD1_k127_900938_68 - - - - 0.0003837 51.0
LYD1_k127_900938_7 IMP dehydrogenase activity K03406,K15371 - 1.4.1.2 1.31e-212 678.0
LYD1_k127_900938_8 Hydantoinase/oxoprolinase N-terminal region K01469,K01473 - 3.5.2.14,3.5.2.9 1.114e-201 660.0
LYD1_k127_940073_0 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003202 360.0
LYD1_k127_940073_1 Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway K16329 - 4.2.1.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003027 336.0
LYD1_k127_940073_2 PFAM PfkB domain protein K16328 - 2.7.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000286 319.0
LYD1_k127_940073_4 Phage integrase, N-terminal SAM-like domain K14059 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004452 260.0
LYD1_k127_940073_5 LVIVD repeat - - - 0.000000000000003414 90.0
LYD1_k127_940073_6 Helix-turn-helix domain, rpiR family - - - 0.00000000000009536 82.0
LYD1_k127_940073_7 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.0000005619 53.0
LYD1_k127_940073_8 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.00005882 53.0
LYD1_k127_940073_9 - - - - 0.0007114 47.0
LYD1_k127_943339_0 NAD(P)H-binding K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 469.0
LYD1_k127_943339_1 PFAM ComEC Rec2-related protein K02238 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003174 398.0
LYD1_k127_943339_2 Protein of unknown function DUF262 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 333.0
LYD1_k127_943339_3 Highly conserved protein containing a thioredoxin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001623 252.0
LYD1_k127_943339_4 methyltransferase activity K21310 - 2.1.1.334 0.0000000000000000000000000000000000000000001488 166.0
LYD1_k127_943339_5 Protein of unknown function (DUF3788) - - - 0.00000000000000000000000000000961 123.0
LYD1_k127_943339_6 - - - - 0.00000004396 61.0
LYD1_k127_9777_0 COGs COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL CutL homologs K12528 - - 0.0 1477.0
LYD1_k127_9777_1 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 0.0 1288.0
LYD1_k127_9777_10 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009688 354.0
LYD1_k127_9777_11 ErfK ybiS ycfS ynhG family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 331.0
LYD1_k127_9777_12 PFAM ATPase associated with various cellular activities, AAA_5 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000094 310.0
LYD1_k127_9777_13 PFAM ErfK YbiS YcfS YnhG family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 319.0
LYD1_k127_9777_14 PFAM Thioredoxin domain K05838 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 297.0
LYD1_k127_9777_15 Homocysteine S-methyltransferase K00548 - 2.1.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001276 281.0
LYD1_k127_9777_16 Belongs to the pseudouridine synthase RsuA family K06178,K06181 - 5.4.99.20,5.4.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000001377 255.0
LYD1_k127_9777_17 GDP-mannose mannosyl hydrolase activity K01515,K03574 - 3.6.1.13,3.6.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000019 247.0
LYD1_k127_9777_18 PFAM cell wall hydrolase autolysin K01448 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000006506 248.0
LYD1_k127_9777_19 ferrous iron binding K06990,K09141 - - 0.00000000000000000000000000000000000000000000000000000000000000000004057 237.0
LYD1_k127_9777_2 peptidase dimerisation domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006592 550.0
LYD1_k127_9777_20 FAD binding domain in molybdopterin dehydrogenase K03519,K12529 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000003324 214.0
LYD1_k127_9777_21 CO dehydrogenase flavoprotein C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000002097 213.0
LYD1_k127_9777_22 - - - - 0.000000000000000000000000000000000000000000000000000001959 194.0
LYD1_k127_9777_23 - - - - 0.00000000000000000000000000000000000000000000000000003893 194.0
LYD1_k127_9777_24 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.0000000000000000000000000000000000000000000000000003867 192.0
LYD1_k127_9777_25 Thioesterase superfamily protein - - - 0.00000000000000000000000000000000000000000000000003962 183.0
LYD1_k127_9777_26 flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase - - - 0.0000000000000000000000000000000006623 135.0
LYD1_k127_9777_27 2'-5' RNA ligase superfamily - - - 0.00000000000000000000000000000006757 131.0
LYD1_k127_9777_28 phosphatase - - - 0.000000000000000000000000001296 119.0
LYD1_k127_9777_29 metallocarboxypeptidase activity K14054 - - 0.0000000000000000000001044 109.0
LYD1_k127_9777_3 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003503 545.0
LYD1_k127_9777_4 PFAM VWA containing CoxE family protein K07161 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 544.0
LYD1_k127_9777_5 XdhC Rossmann domain K07402 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 374.0
LYD1_k127_9777_6 TIGRFAM LPPG domain protein containing protein K11212 - 2.7.8.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 369.0
LYD1_k127_9777_7 Protein of unknown function (DUF1385) K09153 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002735 357.0
LYD1_k127_9777_8 TIGRFAM F420-dependent oxidoreductase K12234 - 6.3.2.31,6.3.2.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000325 341.0
LYD1_k127_9777_9 inorganic diphosphatase activity K15986 - 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002885 345.0